BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009977
         (521 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 521

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/513 (71%), Positives = 424/513 (82%)

Query: 4   VRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHG 63
           +RF   K    S+ S +S S PWISPL+  KA     D P ETS T V+  ++ +FISH 
Sbjct: 1   MRFFCHKHRLLSTSSATSYSFPWISPLQFSKAAPLVPDSPTETSSTLVETGRKCKFISHE 60

Query: 64  AAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTY 123
           +AI+LIK EK+PQ ALEIFN V EQKGFNHN+ATY+T++ KLA+ KKF AVDA+L QMTY
Sbjct: 61  SAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTY 120

Query: 124 ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
           ETCKFHE IFLNLMKHF   SLHERVLEMF+ I PI REKPSLKAISTCLN+L+ES Q+D
Sbjct: 121 ETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQID 180

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
           LAQ  L Y N+HL+++PNTCIFNIL+KHHCK G LESA EV+ EMKKS+ SYPN+ITYST
Sbjct: 181 LAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYST 240

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LIDGLC NGR +EAIELFEEMVSKDQILPDALTY+VLI GFC GGK DRA+KIMEFM++N
Sbjct: 241 LIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSN 300

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           GC+PNVFNY+ LMNGFCKEG+L+EAKEVFDEMK+  LKPDT+GYTTLINCFC  GR+DEA
Sbjct: 301 GCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEA 360

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           +ELLKEM E  CKAD VTFN++L GLCREG+ +EAL MLE L Y+G+YLNK SYRIVLNF
Sbjct: 361 MELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNF 420

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            CQKGELEK+  LL LML RGF+PHYATSNELLV LC+AGM ++A  ALFGL +MGF PE
Sbjct: 421 LCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPE 480

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKESG 516
             SWA L+E ICR RKLLF FEL+DELV KESG
Sbjct: 481 PKSWAHLIEYICRERKLLFVFELVDELVEKESG 513


>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/490 (74%), Positives = 423/490 (86%), Gaps = 1/490 (0%)

Query: 26  WISPLEVIKANTPKADPP-VETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNT 84
           WISPL+ + A +PK DPP  E + T V+ RK+ +FISH +AI+LIK E +PQ ALEIFN 
Sbjct: 23  WISPLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNR 82

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           V+EQ+GF+HNNATYATIL KLA+ KKF+A+DAVL QMTYETCKFHEGIFLNLMKHFS  S
Sbjct: 83  VAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLS 142

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           LHERV+EMF  I PI REKPSLKAISTCLNLL+ESNQVDL + FL  S + L L+PNTCI
Sbjct: 143 LHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCI 202

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+KHHCK G ++SAFEV++EMKKS +SYPNLITYSTLI+GLC +GR +EAIELFEEM
Sbjct: 203 FNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM 262

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSKDQILPDALTYN LI+GFC G KVDRA KIMEFMK NGCNPNVFNY+ LMNGFCKEG+
Sbjct: 263 VSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGR 322

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+EAKEVFDEMK+  LKPDT+GYTTLIN FCRAGRVDEA+ELLK+M+E  C+AD VTFN+
Sbjct: 323 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNV 382

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ILGGLCREG+ EEA GMLE+L Y+G+YLNKASYRIVLN  C++GEL+KA +L+ LML RG
Sbjct: 383 ILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRG 442

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            LPH+ATSNELLV LC+AG   DA +AL GL+E+GFKPE +SWALLVELICR RKLL AF
Sbjct: 443 VLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAF 502

Query: 505 ELLDELVIKE 514
           ELLD+LVI+E
Sbjct: 503 ELLDDLVIQE 512


>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
 gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
          Length = 509

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/514 (70%), Positives = 421/514 (81%), Gaps = 12/514 (2%)

Query: 1   MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFI 60
           MNSV+  +  C +  SFS    SLPWISPL  +   TPK DPP     T ++ R++ +FI
Sbjct: 1   MNSVKVVI--CHKHRSFS----SLPWISPLHFL---TPKLDPP---PKTLLEPRRKPKFI 48

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           SH  A++LIK E++PQ ALEIFN V EQKGFNHN+ATY+TI+DKLAR KKF+AVDA+LRQ
Sbjct: 49  SHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQ 108

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           M YETCKFHE +FLNLMK+F+  S  ERV+EMF+KI PI REKPSLKAISTCLNLL+ES 
Sbjct: 109 MMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVESK 168

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           QVDL + FL   N+   LKPNTCIFNI IK+HCK G LESAF V+KEMKKS +SYPNLIT
Sbjct: 169 QVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLIT 228

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           YSTL+DGLC++GR +EAIELFEEMVSKDQILPDALTYNVLI+GF   GKVDRAKKIMEFM
Sbjct: 229 YSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFM 288

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           K+NGC+PNVFNY+ LM+GFCKEG+L+EA + F+EMK F LK DT+GYT LIN FCR GR+
Sbjct: 289 KSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRI 348

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEA+ LL+EMKE  CKADIVT N++L G C EG+ EEALGML +L  +GIYLNKASYRIV
Sbjct: 349 DEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIV 408

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           LN  CQKG+L+KA+ELL L L RGF+PH+ATSNELLV LCKAGMA+DA +AL+GL EMGF
Sbjct: 409 LNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGF 468

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           KPE DSWALLVE +CR RKLL AFELLDEL   E
Sbjct: 469 KPEQDSWALLVEFVCRERKLLLAFELLDELTANE 502



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 2/179 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LK +T  + ILI + C+ G ++ A  +L+EMK+++    +++T + L+ G C  GR  EA
Sbjct: 328 LKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCK-ADIVTVNVLLRGFCGEGRTEEA 386

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + +   + S+   L  A +Y ++++  C+ G +D+A +++    + G  P+      L+ 
Sbjct: 387 LGMLNRLSSEGIYLNKA-SYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLV 445

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           G CK G   +A      +     KP+   +  L+   CR  ++  A ELL E+    C+
Sbjct: 446 GLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTANECE 504


>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/507 (66%), Positives = 402/507 (79%), Gaps = 4/507 (0%)

Query: 11  CCRFSS--FSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISL 68
           CCR        S+SSLPWISPL   K   PK DPP E      + RK+S++I+H  AI+L
Sbjct: 82  CCRHMQPYRVPSASSLPWISPLNFTKPLEPKLDPPPEI--VVAETRKKSKYITHDVAINL 139

Query: 69  IKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF 128
           IK EK+PQ AL+IFN VSEQKGFNHNNATYATIL KLA++KKF+AVD VL QMTYE CKF
Sbjct: 140 IKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACKF 199

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
           HEG+F+NLMKH+S C  HE+V + F  I  I REKPS KAIS+CLNLL++SNQVDL +  
Sbjct: 200 HEGVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKL 259

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L Y+ + L  KPN CIFNIL+K+HC+RG ++SAFEV+KEM+ S+ SYPN+ITYSTL+DGL
Sbjct: 260 LLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGL 319

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C+NGR +EA ELFEEMVSKDQI+PD LTYNVLI+GFCR GK DRA+ ++EFMKNNGC PN
Sbjct: 320 CRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPN 379

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           VFNY+ L++G CK GKLQ+AK V  EMK+  LKPD I YT+LIN F R G++DEA+ELL 
Sbjct: 380 VFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLT 439

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EMKE  C+AD VTFN+ILGGLCREG+ +EAL M+EKL   G+YLNK SYRIVLN   Q  
Sbjct: 440 EMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNC 499

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           EL KA +LL LML RGF+PHYATSNELLVRLCK GMA DAA ALF LV+MGF+P+ DSW 
Sbjct: 500 ELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWE 559

Query: 489 LLVELICRGRKLLFAFELLDELVIKES 515
           LL++LICR RKLL+ FELLDELV   S
Sbjct: 560 LLIDLICRDRKLLYVFELLDELVTSNS 586


>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/490 (70%), Positives = 398/490 (81%), Gaps = 28/490 (5%)

Query: 26  WISPLEVIKANTPKADPP-VETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNT 84
           WISPL+ + A +PK DPP  E + T V+ RK+ +FISH +AI+LIK E +PQ ALEIFN 
Sbjct: 93  WISPLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNR 152

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           V+EQ+GF+HNNATYATIL KLA+ KKF+A+DAVL QMTYETCKFHEGIFLNLMKHFS  S
Sbjct: 153 VAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLS 212

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           LHERV+EMF  I PI REKPSLKAISTCLNLL+ESNQ  +                    
Sbjct: 213 LHERVVEMFDAIXPIVREKPSLKAISTCLNLLVESNQSSIT------------------- 253

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
                    K G ++SAFEV++EMKKS +SYPNLITYSTLI+GLC +GR +EAIELFEEM
Sbjct: 254 --------AKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM 305

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSKDQILPDALTYN LI+GFC G KVDRA KIMEFMK NGCNPNVFNY+ LMNGFCKEG+
Sbjct: 306 VSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGR 365

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+EAKEVFDEMK+  LKPDT+GYTTLIN FCRAGRVDEA+ELLK+M E  C+AD VTFN+
Sbjct: 366 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNV 425

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ILGGLCREG+ EEA GMLE+L Y+G+YLNKASYRIVLN  C++GEL+KA +L+ LML RG
Sbjct: 426 ILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRG 485

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            LPH+ATSNELLV LC+AG   DA +AL GL+E+GFKPE +SWALLVELICR RKLL AF
Sbjct: 486 VLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAF 545

Query: 505 ELLDELVIKE 514
           ELLD+LVI+E
Sbjct: 546 ELLDDLVIQE 555


>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
 gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
          Length = 504

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/492 (65%), Positives = 402/492 (81%), Gaps = 3/492 (0%)

Query: 23  SLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIF 82
           ++ W+S   + K+NT      +  +   +  + +S +ISH  AI LIK E++PQ AL+IF
Sbjct: 14  AIGWVSKTVISKSNTS---IRLFATSKEIQKKSKSSYISHETAIKLIKNERDPQHALDIF 70

Query: 83  NTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN 142
           N VSEQ+GFNHN+ATYA+I+  LA+YKKF+A+D VL QMTY+TCK HEGIFLNLMKHFS 
Sbjct: 71  NMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSK 130

Query: 143 CSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
            S+HERVL+MF+ I  I REKPSLKAISTCLNLL+ES++VDLA+  L  +   L L+PNT
Sbjct: 131 SSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNT 190

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
           CIFNIL+KHHC+ G L++AFEV+KEMK +++SYPNL+TYSTLI GLC+NG+ +EAIE FE
Sbjct: 191 CIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFE 250

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EMVSKD ILPDALTYN+LI+GFC+ GKVDRA+ I+EFMK+NGC+PNVFNY+ LMNG+CKE
Sbjct: 251 EMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKE 310

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G+LQEAKEVF+E+K+  +KPDTI YTTLINC CR GRVDEA ELL++MK++ C+AD VTF
Sbjct: 311 GRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTF 370

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N++LGGLCREG+ +EAL M++KL ++G YLNK SYRIVLNF  QKGEL KA ELL LML 
Sbjct: 371 NVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLN 430

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           RGF+PH+ATSN LL+ LC  GM +DA  +L GL+EMGFKPE +SW  LV+LICR RK+L 
Sbjct: 431 RGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLP 490

Query: 503 AFELLDELVIKE 514
            FELLD LV +E
Sbjct: 491 VFELLDVLVTQE 502


>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/509 (63%), Positives = 392/509 (77%), Gaps = 13/509 (2%)

Query: 12  CRFSSF-----STSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAI 66
           CR   F     S   S LPWISPL+  KA+                 RKR + ISH +AI
Sbjct: 46  CRIMKFCAMYRSRHGSWLPWISPLKFTKADP-------PPEPLPSPPRKR-KHISHDSAI 97

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
            LIK EK+PQ AL IFN VSEQ GF HNNATYATILDKLAR   F AVD VL QMTYETC
Sbjct: 98  DLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETC 157

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
           KFHEGIF+NLMKHFS  SLHE++L  +  I PI REKPS KA+STCLNLL++SN+VDLA+
Sbjct: 158 KFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLAR 217

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
             L ++ + L  KPN C+FNIL+K+HCK G L+SAFE+++EM+ S+ SYPNL+TYSTL+D
Sbjct: 218 KLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMD 277

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           GLC+NGR +EA +LFEEMVS+D I+PD LTYNVLI+GFCRGGK DRA+ +++FMK+NGC 
Sbjct: 278 GLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCY 337

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           PNV+NY+ L++G CK GKL++AK V  E+K   LKPD + YT+LIN  CR G+ DEA+EL
Sbjct: 338 PNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIEL 397

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L+EMKE GC+AD VTFN++LGGLCREGK EEAL M+EKL   G+YLNK SYRIVLN   Q
Sbjct: 398 LEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQ 457

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           K EL++A ELL LML RGF PHYATSNELLV LCKAGM +DAA+ALF LVEMGF+P  ++
Sbjct: 458 KCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLET 517

Query: 487 WALLVELICRGRKLLFAFELLDELVIKES 515
           W +L+ LICR RKLL+ FELLDELV+  +
Sbjct: 518 WEVLIGLICRERKLLYVFELLDELVVTNT 546


>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 507

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 280/485 (57%), Positives = 367/485 (75%)

Query: 26  WISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTV 85
           W+SP+   +    K DPP E+S + ++   +++FISH + +SL+K E++PQ AL+IFN  
Sbjct: 21  WVSPICFSEKKKKKLDPPPESSISTMETNPKTKFISHESTVSLMKRERDPQRALDIFNKA 80

Query: 86  SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           S+QKGFNHNNATY+ +LD L R+KKF AVDA+L QM YETC+F E +FLNLM+HFS   L
Sbjct: 81  SQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRFDL 140

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           H++V+EMF+ I  I R KPSL AISTCLNLLI+S +VDLA+  L Y+  +L L+PNTCIF
Sbjct: 141 HDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIF 200

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           NIL+KHHCK G ++SAF V++EMK+S +SYPN ITYSTL+D L    R +EA+ELFE+M+
Sbjct: 201 NILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMI 260

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           SK  I PD + +NV+I+GFCR G+V+RAK I++FMK NGCNPNV+NY+ LMNGFCKEGK+
Sbjct: 261 SKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKI 320

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           QEAK+VFDE+K   LK DT+GYTTL+NC CR G +DEA++LL EMK   C+AD +T+N+I
Sbjct: 321 QEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVI 380

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GL  EG+ EEAL ML++   +G++LNK SYRI+LN  C  GELEKA++ L +M  RG 
Sbjct: 381 LRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGI 440

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            PH+AT NEL+VRLC++G  E     L G + +G  P   SW  +VE IC+ RKL+  FE
Sbjct: 441 WPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKERKLVHVFE 500

Query: 506 LLDEL 510
           LLD L
Sbjct: 501 LLDSL 505


>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
 gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
 gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 506

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/461 (58%), Positives = 354/461 (76%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
           V+   +++FISH +A+SL+K E++PQ  L+IFN  S+QKGFNHNNATY+ +LD L R+KK
Sbjct: 45  VETNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKK 104

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
           F AVDA+L QM YETC+F E +FLNLM+HFS   LH++V+EMF+ I  I R KPSL AIS
Sbjct: 105 FLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIS 164

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           TCLNLLI+S +V+L++  L Y+  +L L+PNTCIFNIL+KHHCK G +  AF V++EMK+
Sbjct: 165 TCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKR 224

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S +SYPN ITYSTL+D L  + R +EA+ELFE+M+SK+ I PD +T+NV+I+GFCR G+V
Sbjct: 225 SGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEV 284

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           +RAKKI++FMK NGCNPNV+NY+ LMNGFCK GK+QEAK+ FDE+K   LK DT+GYTTL
Sbjct: 285 ERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +NCFCR G  DEA++LL EMK   C+AD +T+N+IL GL  EG+ EEAL ML++   +G+
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGV 404

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           +LNK SYRI+LN  C  GELEKA++ L +M  RG  PH+AT NEL+VRLC++G  E    
Sbjct: 405 HLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVR 464

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L G + +G  P   SW  +VE IC+ RKL+  FELLD LV
Sbjct: 465 VLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505


>gi|242095134|ref|XP_002438057.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
 gi|241916280|gb|EER89424.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
          Length = 499

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 228/497 (45%), Positives = 320/497 (64%), Gaps = 14/497 (2%)

Query: 23  SLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIF 82
           +LPWISPL+  ++    A P            +  R++ H     LI      Q AL++F
Sbjct: 6   ALPWISPLQY-RSPARGAPPSPPPPAPPPPPTRPPRYLHHPELARLIASSPSAQRALDLF 64

Query: 83  NTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN 142
           N  S Q+GF+H  AT++ +L +LAR +   A  AVLR+   E C+F E  FL L++    
Sbjct: 65  NAASSQRGFSHTPATFSALLVRLARARLPRAAAAVLRRTASEPCRFQEPQFLPLVRLLPP 124

Query: 143 CSLHERVLEMFHKIHPITR-EKPSLKAISTCLNLLIESNQV-----DLAQNFLKYSNQHL 196
               +  L +   +  + R  + S KA++ CL+ L+ S        +L  +     N++L
Sbjct: 125 ----DHALALLRFLPALLRTSRVSHKALAVCLDRLVSSRGCHGVLDELLSDLRDPRNKYL 180

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS--YPNLITYSTLIDGLCKNGRF 254
             +PNTC++NILIKH  + G LE+AF+VL EM++   +   PNL+TYSTLI GLC+ G+ 
Sbjct: 181 P-RPNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKM 239

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA ELFEEM+ KD+I+PD L YNV+IDGFCR G+VD+A+ I  FMK N C PN FNY T
Sbjct: 240 MEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYAT 299

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK+  ++ A+ VF+EM+N  ++PD + YT LI C CR G VDEA+ L+ EMK++G
Sbjct: 300 LINGHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKG 359

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           C+AD+VT+N+++ GLCR+G+  EA+ +LE +  +G+ LN ASYRI++N  C +GE++KA+
Sbjct: 360 CRADVVTYNLVIEGLCRDGRTVEAMDLLESVPLEGVKLNVASYRILMNCLCSRGEMDKAV 419

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            LL LML RGFLPHYA SN LL+ LC AG   DA +AL+GL + GF PE+  W  LVE +
Sbjct: 420 GLLGLMLGRGFLPHYAASNNLLIGLCDAGRIADATMALYGLADAGFMPEARCWERLVETM 479

Query: 495 CRGRKLLFAFELLDELV 511
           CR RK   + ELLD LV
Sbjct: 480 CRERKQRRSTELLDVLV 496



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 114/211 (54%), Gaps = 4/211 (1%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL---LKPDTIGYTTLINCFCRAGRVDEA 363
           PN   Y  L+  F + G+L+ A +V DEM+ +    +KP+ + Y+TLI   CR G++ EA
Sbjct: 183 PNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMMEA 242

Query: 364 LELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            EL +EM E+     D + +N+I+ G CR G++++A  +   +  +    N  +Y  ++N
Sbjct: 243 FELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLIN 302

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+K ++E A  +   M   G  P   +   L+  LC+ G  ++A   +  + + G + 
Sbjct: 303 GHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKGCRA 362

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +  ++ L++E +CR  + + A +LL+ + ++
Sbjct: 363 DVVTYNLVIEGLCRDGRTVEAMDLLESVPLE 393


>gi|413944087|gb|AFW76736.1| hypothetical protein ZEAMMB73_938811 [Zea mays]
          Length = 496

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/498 (44%), Positives = 321/498 (64%), Gaps = 17/498 (3%)

Query: 22  SSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEI 81
           ++LPWISPL+  +     +     +        +R R++ H     LI+     Q AL++
Sbjct: 5   AALPWISPLQYRRPGRGAS----PSPPPPPPPTRRPRYLHHPELARLIESSPSAQRALDL 60

Query: 82  FNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS 141
           FN  S Q  F+H  AT++ +L +LAR +   A  AVLR+   E C+F E  FL L++   
Sbjct: 61  FNAASSQHAFSHTPATFSALLVRLARARLPRAAAAVLRRTASEPCRFQEPQFLPLVRLLP 120

Query: 142 NCSLHERVLEMFHKIHPITR-EKPSLKAISTCLNLLIESNQV-----DLAQNFLKYSNQH 195
                +  L +   +  + R  + S KA++ CL+ L+ S        +L  +     N++
Sbjct: 121 P----DHALVLLRFLPALLRTSRVSHKALAVCLDRLVSSRGCHGVLNELLADLRDPRNKY 176

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS--YPNLITYSTLIDGLCKNGR 253
           L  +PNTC++NIL+KH+ K G LE+AF+VL EM++   +   PNL+TYSTLI GLC+ G+
Sbjct: 177 LP-RPNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGK 235

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            +EA ELFEEM+ KD+I+PD L YNV+IDGFCR G+VD+A+ I  FM+ N C PN FNY 
Sbjct: 236 MKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYA 295

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+NG CK+  ++ A+ VF+EM+N  ++PD + YT LI C CR G VDE + L+ EMKE+
Sbjct: 296 TLINGHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEK 355

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC+AD+VT+N+++ GLC++G+  EA+G+LE +  +G+ LN ASYRI++N  C +GE+++A
Sbjct: 356 GCRADVVTYNLVIEGLCKDGRTVEAMGLLESVPLEGVKLNVASYRILMNCLCSRGEMDRA 415

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           + LL LML RGFLPHYA SN LL+ LC AG   DA +AL+GL + GF PE   W  LVE 
Sbjct: 416 VGLLGLMLGRGFLPHYAASNNLLIGLCDAGRIADATMALYGLADAGFMPEPRCWERLVES 475

Query: 494 ICRGRKLLFAFELLDELV 511
           +CR RK   + +LL+ LV
Sbjct: 476 VCRERKQRRSTDLLEVLV 493



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 113/211 (53%), Gaps = 4/211 (1%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL---LKPDTIGYTTLINCFCRAGRVDEA 363
           PN   Y  L+  + K G+L+ A +V DEM+ +    +KP+ + Y+TLI   CR G++ EA
Sbjct: 180 PNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKEA 239

Query: 364 LELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            EL +EM E+     D + +N+I+ G CR+G++++A  +   +  +    N  +Y  ++N
Sbjct: 240 FELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLIN 299

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+K ++E A  +   M   G  P   +   L+  LC+ G  ++    +  + E G + 
Sbjct: 300 GHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKGCRA 359

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +  ++ L++E +C+  + + A  LL+ + ++
Sbjct: 360 DVVTYNLVIEGLCKDGRTVEAMGLLESVPLE 390


>gi|357124808|ref|XP_003564089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Brachypodium distachyon]
          Length = 502

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/503 (44%), Positives = 322/503 (64%), Gaps = 14/503 (2%)

Query: 18  STSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQC 77
           +++ + LPWISPL  +  +  +A P          +    R++ H     LI      Q 
Sbjct: 6   ASAKAPLPWISPL--LYRSPTRAAPSPPPPPPSPPSSPSPRYVDHPDLARLIASSDSGQR 63

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++FN  + Q+GF+H  AT++ +L +LAR +   A  A+LR+     C+F E  FL L+
Sbjct: 64  ALDLFNAAAGQRGFSHTAATFSALLIRLARARLPSAAAAILRRAASMPCRFLEPHFLPLL 123

Query: 138 KHFSNCSLHERVLEMFHKIHPI-TREKPSLKAISTCLNLLIESN----QVDLAQNFLKYS 192
           +        +  L +   +  +  R + S KA++ CL+ L+ S       DL  +     
Sbjct: 124 RLLPP----DHALALLRFLPSLLRRRRVSHKALAVCLDRLVSSRCPDVLSDLIADLRDPR 179

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS--YPNLITYSTLIDGLCK 250
           N++L   PNTC++NILIKH+ K G  E+AF VL EM++       PNL+TYSTLI GLC+
Sbjct: 180 NKYLP-TPNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCR 238

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G+ +EA ELFEEM+ KD I+PD LTYNV+I+GFCR G+VD+A+ I  FM+ N C PN F
Sbjct: 239 AGKMKEAFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAF 298

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           NY TLMNG  ++G+L+  + VF+EMK+  ++PD + YT LI C CR G VDE ++L++EM
Sbjct: 299 NYATLMNGHSRKGELENLRMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREM 358

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +E+GCKAD+VT+N+++ GLC++ ++ EA+ +L  L  +G+ LN ASYRIV+N  C  G++
Sbjct: 359 REKGCKADVVTYNLLIEGLCKDKRMVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDM 418

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           EKA+ LL LML RGFLPHYA SN+LL+ LC  G   DA +AL+GL  +GFKP++  W  L
Sbjct: 419 EKAVGLLGLMLGRGFLPHYAASNDLLIGLCGVGRVADATVALYGLASVGFKPDTSCWGKL 478

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           VE +CR RKL  + ELLD L+ +
Sbjct: 479 VEAVCRDRKLRRSVELLDVLITE 501


>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
 gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
 gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
 gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
          Length = 506

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/508 (43%), Positives = 316/508 (62%), Gaps = 20/508 (3%)

Query: 16  SFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDAR-KRSRFISHGAAISLIKCEKE 74
           S +++ + LPWISPL            P        +A   + R++ H     LI     
Sbjct: 4   SPASTKAPLPWISPLHYRSPTRAAPPSPPPPPPPLPEAPLTQLRYVHHPDLARLIASSPS 63

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
            Q AL++FN  + Q+GF+H  AT+A +L +LAR +   A  AVLR+     C+F E  FL
Sbjct: 64  AQRALDLFNAAAAQRGFSHTPATFAALLVRLARSRLPSAAAAVLRRAASAPCRFLEPQFL 123

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ---------VDLA 185
            L++          +  +      + R + S KA++ CL+ L+ S +          DL 
Sbjct: 124 PLLRLLPP---DHSLALLRLLPALLRRGRVSRKALAVCLDRLVSSRRCPDVLTELLADLR 180

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS--YPNLITYST 243
               KY  Q     PNTCI+NILIKH+ K+G L +AF+V  EM+K   +   P+L+TYST
Sbjct: 181 DPRSKYLPQ-----PNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYST 235

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI GLC+  + +EA ELFE+M+ KD+I+PD LTYN+LI GFCR G+V++A+ I  FM+ N
Sbjct: 236 LIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKN 295

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
            C PN FNY TL+NG CK+G+++ A+ VF+EM    ++PD + YT+L+ C CR G VDE 
Sbjct: 296 ECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEG 355

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           + L++EM ++GCKAD+VT+N++L GLC++ +I EA+ +LEKL  +G+ LN ASYRIV+N 
Sbjct: 356 INLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNC 415

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C  GE+EKA  LL +ML RGF+PHYA SN LL+ LC  G   DA + L+GLV+ GF PE
Sbjct: 416 LCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPE 475

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
           +  WA L+E + R RKL  + ELLD L+
Sbjct: 476 ARCWARLIESVFRERKLRRSIELLDVLI 503



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 4/315 (1%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFL 189
           I+  L+KH+          ++F ++  +     +PSL   ST +  L    Q+  A    
Sbjct: 194 IYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELF 253

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           +   +  R+ P+   +N+LI   C+ G +E A  +   M+K++   PN   Y+TLI+G C
Sbjct: 254 EDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECE-PNAFNYATLINGHC 312

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K G    A  +FEEM+ +  + PDA++Y  L+   CR G VD    +++ M   GC  +V
Sbjct: 313 KKGEVEAARGVFEEMI-RSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADV 371

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  L+ G CK+ ++ EA  + +++ +  ++ +   Y  ++NC C  G +++A  LL  
Sbjct: 372 VTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGM 431

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M  RG        N++L GLC  G++ +A   L  L   G       +  ++    ++ +
Sbjct: 432 MLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERK 491

Query: 430 LEKAIELLRLMLCRG 444
           L ++IELL +++  G
Sbjct: 492 LRRSIELLDVLIAEG 506


>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
          Length = 506

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/508 (43%), Positives = 316/508 (62%), Gaps = 20/508 (3%)

Query: 16  SFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDAR-KRSRFISHGAAISLIKCEKE 74
           S +++ + LPWISPL            P        +A   + R++ H     LI     
Sbjct: 4   SPASTKAPLPWISPLHYRSPTRAAPPSPPPPPPPLPEAPLTQLRYVHHPDLARLIASSPS 63

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
            Q AL++FN  + Q+GF+H  AT+A +L +LAR +   A  AVLR+   E C+F E  FL
Sbjct: 64  AQRALDLFNAAAAQRGFSHTPATFAALLVRLARSRLPSAAAAVLRRAASEPCRFLEPQFL 123

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ---------VDLA 185
            L++          +  +      + R + S KA++ CL+ L+ S +          DL 
Sbjct: 124 PLLRLLPP---DHSLALLRLLPALLRRGRVSRKALAVCLDRLVSSRRCPDVLTELLADLR 180

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS--YPNLITYST 243
               KY  Q     PNTCI+NILIK++ K+G L +AF+V  EM+    +   P+L+TYST
Sbjct: 181 DPRSKYLPQ-----PNTCIYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYST 235

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI GLC+  + +EA ELFE+M+ KD+I+PD LTYN+LI GFCR G+V++A+ I  FM+ N
Sbjct: 236 LIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKN 295

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
            C PN FNY TL+NG CK+G+++ A+ VF+EM    ++PD + YT+L+ C CR G VDE 
Sbjct: 296 ECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEG 355

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           + L++EM ++GCKAD+VT+N++L GLC++ +I EA+ +LEKL  +G+ LN ASYRIV+N 
Sbjct: 356 INLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNC 415

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C  GE+EKA  LL +ML RGF+PHYA SN LL+ LC  G   DA + L+GLV+ GF PE
Sbjct: 416 LCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPE 475

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
           +  WA L+E + R RKL  + ELLD L+
Sbjct: 476 ARCWARLIESVFRERKLRRSIELLDVLI 503



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 143/282 (50%), Gaps = 2/282 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +PSL   ST +  L    Q+  A    +   +  R+ P+   +N+LI   C+ G +E A 
Sbjct: 227 RPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQ 286

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +   M+K++   PN   Y+TLI+G CK G    A  +FEEM+ +  + PDA++Y  L+ 
Sbjct: 287 SIFGFMRKNECE-PNAFNYATLINGHCKKGEVEAARGVFEEMI-RSGVQPDAVSYTSLVG 344

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             CR G VD    +++ M   GC  +V  Y  L+ G CK+ ++ EA  + +++ +  ++ 
Sbjct: 345 CLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQL 404

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +   Y  ++NC C  G +++A  LL  M  RG        N++L GLC  G++ +A   L
Sbjct: 405 NVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTL 464

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
             L   G       +  ++    ++ +L ++IELL +++  G
Sbjct: 465 YGLVDTGFMPEARCWARLIESVFRERKLRRSIELLDVLIAEG 506


>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 523

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/458 (46%), Positives = 298/458 (65%), Gaps = 10/458 (2%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           + H     LI      Q AL++FN  +EQ+GF+H  AT++ +L +LAR +   A  AVLR
Sbjct: 67  VDHPDLARLIASSHTGQRALDLFNAAAEQRGFSHTAATFSALLIRLARARLPSATTAVLR 126

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           +     C+F   +  +L+           +  +      + R + S KA++ CL+ L+ S
Sbjct: 127 RAASAPCRF---LEPHLLPLLRLLPPDHSLTLLRLLPSLLRRRRVSHKALAVCLDRLVSS 183

Query: 180 N----QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS- 234
                  DL  +     N++L   PNTC++NILIKH+ K G  E+AF VL EM++     
Sbjct: 184 RCPDVLADLIADLRDLRNKYLP-APNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGD 242

Query: 235 -YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
             PNL+TYSTL+ GLC+ G+ +EA ELFE M+ KD I+PD LTYNV+IDGFCR G+V++A
Sbjct: 243 VRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKA 302

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           + I  FM+ N C PN FNY TL+NG CK+G ++ AK VF+EM++  ++PD + YT LI C
Sbjct: 303 RTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGC 362

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            CR G VDE ++L+ EM+E+GCKAD+VT+N++L GLC++G++ E + +L +L  +G+ LN
Sbjct: 363 LCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLN 422

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
            ASYRIV+N  C  G++EKA+ LL LML RGFLPHYA SN+LL+ LC  G   DA  AL+
Sbjct: 423 VASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGLCDVGRVADATAALY 482

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           GL + GF PE+  WA L+E +CR RKL  + ELLD L+
Sbjct: 483 GLAKFGFMPEASCWAKLIEAVCRDRKLRRSVELLDILI 520



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 4/311 (1%)

Query: 136 LMKHFSNCSLHERVLEMFHKIHPIT--REKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           L+KH+      E    +  ++   T    +P+L   ST L  L  + ++  A    +   
Sbjct: 215 LIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMI 274

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   + P+   +N++I   C+ G +E A  +   M+K++   PN   Y+TLI+G CK G 
Sbjct: 275 EKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECE-PNAFNYATLINGHCKKGD 333

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              A  +FEEM S   + PDA++Y  LI   CR G VD    ++  M+  GC  +V  Y 
Sbjct: 334 VENAKLVFEEMRSA-GVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYN 392

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G CK+G++ E  ++   +    ++ +   Y  ++N  C +G +++A+ LL  M  R
Sbjct: 393 LLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGR 452

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G        N +L GLC  G++ +A   L  L   G     + +  ++   C+  +L ++
Sbjct: 453 GFLPHYAASNKLLIGLCDVGRVADATAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRS 512

Query: 434 IELLRLMLCRG 444
           +ELL +++  G
Sbjct: 513 VELLDILITGG 523


>gi|356510096|ref|XP_003523776.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g18475-like [Glycine max]
          Length = 640

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/283 (67%), Positives = 227/283 (80%)

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +SYPNL TYST +DGLC+NGR +EA ELFEEMVS+D I+PD LTYNVLI+ FCR GK DR
Sbjct: 358 LSYPNLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVPDPLTYNVLINEFCRRGKPDR 417

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A+ ++EFMK+N C PNV+NY+ L++G CK GKL++AK V  EMK   LKPDT+ YT+LIN
Sbjct: 418 ARNVIEFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTYTSLIN 477

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             CR G++ EA+ LLKE+KE  C+AD VTFN+ILGGLCRE + EEAL MLEKL   G+YL
Sbjct: 478 FLCRNGQIGEAMGLLKEIKENTCQADTVTFNVILGGLCREDRFEEALDMLEKLPQQGVYL 537

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           NK SYRIVLN   QK EL+KA ELL LML RGF PHYATSNELLV LCKAGM +DAA+AL
Sbjct: 538 NKGSYRIVLNSLTQKCELKKAKELLGLMLSRGFRPHYATSNELLVCLCKAGMVDDAAVAL 597

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           F LVEMGF+P  +SW +L+ LICR RKLL+ FELL+ELVI  S
Sbjct: 598 FYLVEMGFQPGLESWEVLIGLICRERKLLYVFELLNELVITNS 640



 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 182/493 (36%), Positives = 270/493 (54%), Gaps = 44/493 (8%)

Query: 54  RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNH-NNATYATILDKLARYKKFE 112
           RKR ++ISH +AI LIKCEK+ Q  L+IFN VSEQ GF H +NATYATIL+KLA   KF 
Sbjct: 46  RKR-KYISHDSAIDLIKCEKDSQHTLKIFNMVSEQNGFQHGSNATYATILEKLACCYKFH 104

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
           AV  VL QM YETCKFHEGIF+NLMKHFS  S+HE+VL  F  I PI REKP     STC
Sbjct: 105 AVHCVLHQMAYETCKFHEGIFVNLMKHFSKSSIHEKVLHAFFSIQPIVREKPX----STC 160

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           LNLL +SN+VDLA+  L ++ + L  KPNTC+FNIL+K+HCK G L+SAFEV+KEM+ S+
Sbjct: 161 LNLLQDSNRVDLARKLLLHAKRGLTHKPNTCVFNILVKYHCKNGDLDSAFEVVKEMRNSK 220

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAI-------ELFEEMVSKDQI----LPDALTYNVLI 281
           +S   L+ +S +    C   + R ++       ++ E  VSK  +    L   L+   ++
Sbjct: 221 LSLLELVAFSAV---FCHLSQLRYSLSHSVQLTQILEIQVSKSVVPQPFLSTCLSLQAIV 277

Query: 282 ---------DGFCRGGKVDRAKKIMEF------MKNNGCNPNVFNYTTLMNGFCKEGKL- 325
                             D    ++        + ++     ++ ++ L+   C    L 
Sbjct: 278 FHDLNTNLKSSIPVQWSFDDQPSVLVIDLHFFVLHHHSVEVYLYLWSNLLCLSCSGISLF 337

Query: 326 -------QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG-CKA 377
                  Q    + D +   L  P+   Y+T ++  CR GRV EA EL +EM  R     
Sbjct: 338 LSCLCDYQNHHFLTDGVLAGLSYPNLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVP 397

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D +T+N+++   CR GK + A  ++E +  +  Y N  +Y  +++  C+ G+LE A  +L
Sbjct: 398 DPLTYNVLINEFCRRGKPDRARNVIEFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVL 457

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P   T   L+  LC+ G   +A   L  + E   + ++ ++ +++  +CR 
Sbjct: 458 AEMKGSGLKPDTVTYTSLINFLCRNGQIGEAMGLLKEIKENTCQADTVTFNVILGGLCRE 517

Query: 498 RKLLFAFELLDEL 510
            +   A ++L++L
Sbjct: 518 DRFEEALDMLEKL 530



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%), Gaps = 2/274 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L   ST ++ L  + +V  A    +       + P+   +N+LI   C+RG  + A  
Sbjct: 361 PNLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVPDPLTYNVLINEFCRRGKPDRARN 420

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V+ E  KS   YPN+  YS L+DGLCK G+  +A  +  EM     + PD +TY  LI+ 
Sbjct: 421 VI-EFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEM-KGSGLKPDTVTYTSLINF 478

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            CR G++  A  +++ +K N C  +   +  ++ G C+E + +EA ++ +++    +  +
Sbjct: 479 LCRNGQIGEAMGLLKEIKENTCQADTVTFNVILGGLCREDRFEEALDMLEKLPQQGVYLN 538

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y  ++N   +   + +A ELL  M  RG +    T N +L  LC+ G +++A   L 
Sbjct: 539 KGSYRIVLNSLTQKCELKKAKELLGLMLSRGFRPHYATSNELLVCLCKAGMVDDAAVALF 598

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            L   G      S+ +++   C++ +L    ELL
Sbjct: 599 YLVEMGFQPGLESWEVLIGLICRERKLLYVFELL 632


>gi|326487712|dbj|BAK05528.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 455

 Score =  337 bits (864), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 181/400 (45%), Positives = 259/400 (64%), Gaps = 10/400 (2%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           + H     LI      Q AL++FN  +EQ+GF+H  AT++ +L +LAR +   A  AVLR
Sbjct: 58  VDHPDLARLIASSHTGQRALDLFNAAAEQRGFSHTAATFSALLIRLARARLPSATTAVLR 117

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           +     C+F   +  +L+           +  +      + R + S KA++ CL+ L+ S
Sbjct: 118 RAASAPCRF---LEPHLLPLLRLLPPDHSLTLLRLLPSLLRRRRVSHKALAVCLDRLVSS 174

Query: 180 N----QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS- 234
                  DL  +     N++L   PNTC++NILIKH+ K G  E+AF VL EM++     
Sbjct: 175 RCPDVLADLIADLRDLRNKYLP-APNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGD 233

Query: 235 -YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
             PNL+TYSTL+ GLC+ G+ +EA ELFE M+ KD I+PD LTYNV+IDGFCR G+V++A
Sbjct: 234 VRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKA 293

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           + I  FM+ N C PN FNY TL+NG CK+G ++ AK VF+EM++  ++PD + YT LI C
Sbjct: 294 RTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGC 353

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            CR G VDE ++L+ EM+E+GCKAD+VT+N++L GLC++G++ E + +L +L  +G+ LN
Sbjct: 354 LCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLN 413

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            ASYRIV+N  C  G++EKA+ LL LML RGFLPHYA S 
Sbjct: 414 VASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAAST 453



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 124/229 (54%), Gaps = 6/229 (2%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN---PNVFNYTTLMNGFCKEGKLQEA 328
           P+   YN+LI  + + G  + A ++++ M+   C    PN+  Y+TL+ G C+ GK++EA
Sbjct: 198 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 257

Query: 329 KEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            E+F+ M  K+ ++ PD + Y  +I+ FCR G+V++A  +   M++  C+ +   +  ++
Sbjct: 258 FELFEGMIEKDHIV-PDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLI 316

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C++G +E A  + E++   G+  +  SY  ++   C+ G +++ I+L+  M  +G  
Sbjct: 317 NGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCK 376

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
               T N LL  LCK G   +    L  L E G +    S+ +++  +C
Sbjct: 377 ADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLC 425



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 4/208 (1%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL---LKPDTIGYTTLINCFCRAGRVDEA 363
           PN   Y  L+  + K G  + A  V DEM+ +    ++P+ + Y+TL+   CRAG++ EA
Sbjct: 198 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 257

Query: 364 LELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            EL + M E+     D +T+N+I+ G CR G++E+A  +   +  +    N  +Y  ++N
Sbjct: 258 FELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 317

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+KG++E A  +   M   G  P   +   L+  LC+ G  ++    +  + E G K 
Sbjct: 318 GHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKA 377

Query: 483 ESDSWALLVELICRGRKLLFAFELLDEL 510
           +  ++ LL+E +C+  ++    +LL  L
Sbjct: 378 DVVTYNLLLEGLCKDGRMAEVMDLLGRL 405


>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 527

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 156/475 (32%), Positives = 266/475 (56%), Gaps = 19/475 (4%)

Query: 45  ETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIF-----NTVSEQKGFNHNNATYA 99
           ET+DT +  +K    IS     SL++ +K+P  AL++F     ++    K F ++  +Y 
Sbjct: 63  ETNDTQMKTQKP---ISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYD 119

Query: 100 TILDKLARYKKFEAVDAVLRQMTYETCKF--HEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
            I+ KL R K F+ ++ +L+Q+  ET +F  HE IF N++  +    L +R  ++F +I 
Sbjct: 120 LIISKLGRAKMFDEMEEILQQLKQET-RFAPHEVIFCNVIAFYGRAHLPDRAFQVFERI- 177

Query: 158 PITREKPSLKAISTCLNLLIESNQVD-LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
           P  R K ++K++++ L  L+++ Q++ + Q F+  SN      P+ C FNILI   C  G
Sbjct: 178 PSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG---SPDACTFNILIHAACLCG 234

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            L++ + V  EM+K  +  PN++T+ TLI GL  N + +EA+ L E+MV    I P+A  
Sbjct: 235 DLDAVWGVFDEMQKRGVK-PNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASI 293

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y  LI GFC  G+++ A K+ E M  +        Y+TL++   K G+ +E  ++  EM 
Sbjct: 294 YTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMG 353

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               KPDT+ Y  +IN  C+   ++ A  ++ EM E+GCK D+ +FN I+G LC+EGK++
Sbjct: 354 ENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLD 413

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +A+ +LE +   G   +  SYRI+ +  C+  +L++A  +L  M+ +G++P   + N+L+
Sbjct: 414 KAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLV 473

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            RLC+    E   + L  L   G +   D WA +V  + +   L  +  L+D L+
Sbjct: 474 DRLCQECNMELLWMILNSLGR-GNRMNMDMWARVVAFVYK-ENLSESSNLIDSLI 526


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 248/472 (52%), Gaps = 19/472 (4%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
           K S+ I+      L++ E++ + A  IF++ S +   GF H++ T+  ++ KL    +F 
Sbjct: 8   KWSKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFR 67

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
             + +L +M  E C+  E IFL++ + +    +    + +FHK++     KP+ K+  + 
Sbjct: 68  PAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGC-KPTDKSYISV 126

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR-GTLESAFEVLKEMKKS 231
             +L+E NQ+ +A +F KY  + + ++ +    N+LIK  CK  GT+++AFE+ +EM K 
Sbjct: 127 FAILVEENQLKVAMSFYKYMRE-MGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKR 185

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
               P+  TY TLI+GLCK G+  EA ELF+EM +K    P  +TY+ L+ G C+ G VD
Sbjct: 186 GCD-PDSYTYGTLINGLCKLGKTFEAKELFKEMDTKG-CSPSVVTYSCLMHGLCQAGNVD 243

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A  + + MK     PNVF Y++LM+G CK G   EA E+ + M     KP+ + Y+TLI
Sbjct: 244 EAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLI 303

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+ G++ EA+E L  MK +G K D   +  I+ G C   K +EA   L+++    I 
Sbjct: 304 NGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQIS 363

Query: 412 LNKASYRI-------VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            N+ ++ +       V+   C  G L ++ +L   M  RG      T + L+   CK G 
Sbjct: 364 PNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGD 423

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF-----ELLDELV 511
              AA     +V  G  P+   W+ +V      RK+  AF     EL++E V
Sbjct: 424 LHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMNEFV 475



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 141/315 (44%), Gaps = 45/315 (14%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG-GKVD---RAKK 295
           T+  +I  L     FR A E+   M  +   + + +  ++     CRG G+V     A +
Sbjct: 52  TFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSI-----CRGYGRVHMPLDAIR 106

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M + GC P   +Y ++     +E +L+ A   +  M+   ++   +    LI   C
Sbjct: 107 VFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALC 166

Query: 356 R-AGRVDEALELLKEMKERGCKAD-----------------------------------I 379
           + +G +D A E+ +EM +RGC  D                                   +
Sbjct: 167 KNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSV 226

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT++ ++ GLC+ G ++EA+G+ +K+    I  N  +Y  +++  C+ G   +A+ELL +
Sbjct: 227 VTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEM 286

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +   P+  T + L+  LCK G   +A   L  +   G KP++  +  ++   C  RK
Sbjct: 287 MVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRK 346

Query: 500 LLFAFELLDELVIKE 514
              A   LDE+V+ +
Sbjct: 347 FQEAATYLDEMVLGQ 361



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 117/243 (48%), Gaps = 3/243 (1%)

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D  T+ V+I       +   A++++  MK   C      + ++  G+ +     +A  VF
Sbjct: 49  DHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVF 108

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR- 391
            +M +F  KP    Y ++        ++  A+   K M+E G +  +V+ N+++  LC+ 
Sbjct: 109 HKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKN 168

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G I+ A  +  ++   G   +  +Y  ++N  C+ G+  +A EL + M  +G  P   T
Sbjct: 169 SGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVT 228

Query: 452 SNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + L+  LC+AG   D A+ LF  + +   +P   +++ L++ +C+    L A ELL+ +
Sbjct: 229 YSCLMHGLCQAGNV-DEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMM 287

Query: 511 VIK 513
           V K
Sbjct: 288 VRK 290


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 253/491 (51%), Gaps = 42/491 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    I L+K EK P  AL IF++V+   G++H    +  IL +L   K    V  ++ 
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVE 67

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
            +  + CK  E + L ++K ++  S+ ++ L++F ++H I   +P +++ ++ LN LIES
Sbjct: 68  LIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIES 127

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           N+ D A++F  Y  + + L PN   +NILIK  C++   + A E+L  M +   S P++ 
Sbjct: 128 NKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS-PDVF 185

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF--------------- 284
           +Y TLI+ L KNG   +A++LF+EM  +  + PD   YN+LIDGF               
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERG-VTPDVACYNILIDGFFKKGDILNASEIWER 244

Query: 285 ---------------------CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                                C+ GK D + +I   MK N    +++ Y+TL++G C  G
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 304

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            L  A  V+ EM    + PD + Y T++N + RAGR++E LEL K M++ GC+  +V++N
Sbjct: 305 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYN 363

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLMLC 442
           I++ GL    K++EA+ + E L       +  +Y ++++  C+ G L KA+ +L      
Sbjct: 364 ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENG 423

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           RG L  +A S+ ++  LC+ G  ++ A  L  + + G KP       ++    R  KL  
Sbjct: 424 RGDLDTFAYSS-MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 503 AFELLDELVIK 513
           A      +V K
Sbjct: 483 ALRFFGNMVSK 493



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 210/414 (50%), Gaps = 17/414 (4%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           S+G  I+ +        AL++F+ + E +G   + A Y  ++D    +KK + ++A    
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPE-RGVTPDVACYNILIDGF--FKKGDILNA---S 239

Query: 121 MTYETCKFHEGIFLN------LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
             +E       ++ N      ++     C   +   E++H++    R +  L   ST ++
Sbjct: 240 EIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIH 298

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
            L  S  +D A    K   ++  + P+  ++N ++  + + G +E   E+ K M+K    
Sbjct: 299 GLCGSGNLDGATRVYKEMAEN-GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR 357

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
              +++Y+ LI GL +N +  EAI ++E +  KD    D++TY VL+ G C+ G +++A 
Sbjct: 358 --TVVSYNILIRGLFENAKVDEAISIWELLPEKD-CCADSMTYGVLVHGLCKNGYLNKAL 414

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            I+E  +N   + + F Y++++NG C+EG+L E   V D+M     KP+      +IN F
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
            RA ++++AL     M  +GC   +VT+N ++ GL +  +  EA  +++++ + G   N 
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            +Y +++N  CQ  +L+ A+ L    L +GF P     N ++  LC +G  EDA
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 588



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 214/474 (45%), Gaps = 55/474 (11%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E F    E  G + N  TY  ++    R K+F+    +L  M  +        +  L+  
Sbjct: 134 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--------NQVDLAQNFLKY 191
            +        L++F ++ P     P +     C N+LI+         N  ++ +  LK 
Sbjct: 194 LAKNGYMSDALKLFDEM-PERGVTPDV----ACYNILIDGFFKKGDILNASEIWERLLKG 248

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            + +    PN   +N++I   CK G  + +FE+   MKK++    +L TYSTLI GLC +
Sbjct: 249 PSVY----PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG-QDLYTYSTLIHGLCGS 303

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG----------------------- 288
           G    A  +++EM +++ + PD + YN +++G+ R G                       
Sbjct: 304 GNLDGATRVYKEM-AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362

Query: 289 -----------KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
                      KVD A  I E +    C  +   Y  L++G CK G L +A  + +E +N
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
                DT  Y+++IN  CR GR+DE   +L +M + GCK +    N ++ G  R  K+E+
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL     +   G +    +Y  ++N   +     +A  L++ ML +G+ P+  T + L+ 
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542

Query: 458 RLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LC+ G   D A+ L+   +E GFKP+     +++  +C   K+  A +L  E+
Sbjct: 543 GLCQ-GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 6/206 (2%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T  ++ +I   C+ G L+    VL +M K     PN    + +I+G  +  +  +A+  
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK-PNPHVCNAVINGFVRASKLEDALRF 486

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F  MVSK    P  +TYN LI+G  +  +   A  +++ M + G  PN+  Y+ LMNG C
Sbjct: 487 FGNMVSKG-CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC 545

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +  KL  A  ++ +      KPD   +  +I+  C +G+V++AL+L  EMK+R C  ++V
Sbjct: 546 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLV 605

Query: 381 TFNIILGGLCREGKIEEALGMLEKLW 406
           T N ++ G  +    E A     K+W
Sbjct: 606 THNTLMEGFYKVRDFERA----SKIW 627


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 253/491 (51%), Gaps = 42/491 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    I L+K EK P  AL IF++V+   G++H    +  IL +L   K    V  ++ 
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVE 67

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
            +  + CK  E + L ++K ++  S+ ++ L++F ++H I   +P +++ ++ LN LIES
Sbjct: 68  LIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIES 127

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           N+ D A++F  Y  + + L PN   +NILIK  C++   + A E+L  M +   S P++ 
Sbjct: 128 NKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS-PDVF 185

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF--------------- 284
           +Y TLI+ L KNG   +A++LF+EM  +  + PD   YN+LIDGF               
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERG-VTPDVACYNILIDGFFKKGDILNASEIWER 244

Query: 285 ---------------------CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                                C+ GK D + +I   MK N    +++ Y+TL++G C  G
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 304

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            L  A  V+ EM    + PD + Y T++N + RAGR++E LEL K M++ GC+  +V++N
Sbjct: 305 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYN 363

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLMLC 442
           I++ GL    K++EA+ + E L       +  +Y ++++  C+ G L KA+ +L      
Sbjct: 364 ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENG 423

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           RG L  +A S+ ++  LC+ G  ++ A  L  + + G KP       ++    R  KL  
Sbjct: 424 RGDLDTFAYSS-MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 503 AFELLDELVIK 513
           A      +V K
Sbjct: 483 ALRFFGNMVSK 493



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 210/414 (50%), Gaps = 17/414 (4%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           S+G  I+ +        AL++F+ + E +G   + A Y  ++D    +KK + ++A    
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPE-RGVTPDVACYNILIDGF--FKKGDILNA---S 239

Query: 121 MTYETCKFHEGIFLN------LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
             +E       ++ N      ++     C   +   E++H++    R +  L   ST ++
Sbjct: 240 EIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIH 298

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
            L  S  +D A    K   ++  + P+  ++N ++  + + G +E   E+ K M+K    
Sbjct: 299 GLCGSGNLDGATRVYKEMAEN-GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR 357

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
              +++Y+ LI GL +N +  EAI ++E +  KD    D++TY VL+ G C+ G +++A 
Sbjct: 358 --TVVSYNILIRGLFENAKVDEAISIWELLPEKD-CCADSMTYGVLVHGLCKNGYLNKAL 414

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            I+E  +N   + + F Y++++NG C+EG+L E   V D+M     KP+      +IN F
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
            RA ++++AL     M  +GC   +VT+N ++ GL +  +  EA  +++++ + G   N 
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            +Y +++N  CQ  +L+ A+ L    L +GF P     N ++  LC +G  EDA
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 588



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 214/474 (45%), Gaps = 55/474 (11%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E F    E  G + N  TY  ++    R K+F+    +L  M  +        +  L+  
Sbjct: 134 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--------NQVDLAQNFLKY 191
            +        L++F ++ P     P +     C N+LI+         N  ++ +  LK 
Sbjct: 194 LAKNGYMSDALKLFDEM-PERGVTPDV----ACYNILIDGFFKKGDILNASEIWERLLKG 248

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            + +    PN   +N++I   CK G  + +FE+   MKK++    +L TYSTLI GLC +
Sbjct: 249 PSVY----PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG-QDLYTYSTLIHGLCGS 303

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG----------------------- 288
           G    A  +++EM +++ + PD + YN +++G+ R G                       
Sbjct: 304 GNLDGATRVYKEM-AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362

Query: 289 -----------KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
                      KVD A  I E +    C  +   Y  L++G CK G L +A  + +E +N
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
                DT  Y+++IN  CR GR+DE   +L +M + GCK +    N ++ G  R  K+E+
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL     +   G +    +Y  ++N   +     +A  L++ ML +G+ P+  T + L+ 
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542

Query: 458 RLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LC+ G   D A+ L+   +E GFKP+     +++  +C   K+  A +L  E+
Sbjct: 543 GLCQ-GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 188/402 (46%), Gaps = 13/402 (3%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY+T++  L      +    V ++M          ++  ++  +      E  LE++  +
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 157 HPITREKPSLKAISTCLNLLI----ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
                EK   + + +  N+LI    E+ +VD A +  +   +      ++  + +L+   
Sbjct: 352 -----EKEGCRTVVS-YNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGVLVHGL 404

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G L  A  +L+E +  +    +   YS++I+GLC+ GR  E   + ++M +K    P
Sbjct: 405 CKNGYLNKALSILEEAENGRGDL-DTFAYSSMINGLCREGRLDEVAGVLDQM-TKHGCKP 462

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           +    N +I+GF R  K++ A +    M + GC P V  Y TL+NG  K  +  EA  + 
Sbjct: 463 NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            EM +   KP+ I Y+ L+N  C+  ++D AL L  +  E+G K D+   NII+ GLC  
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 582

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           GK+E+AL +  ++       N  ++  ++    +  + E+A ++   +L  G  P   + 
Sbjct: 583 GKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISY 642

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           N  L  LC      DA   L   V+ G  P + +W +LV  +
Sbjct: 643 NITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAV 684



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 135/263 (51%), Gaps = 3/263 (1%)

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           A S+ +N L    ++D     L    +H   KPN  + N +I    +   LE A      
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKH-GCKPNPHVCNAVINGFVRASKLEDALRFFGN 489

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M  S+  +P ++TY+TLI+GL K  RF EA  L +EM+ K    P+ +TY++L++G C+G
Sbjct: 490 MV-SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW-KPNMITYSLLMNGLCQG 547

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            K+D A  +       G  P+V  +  +++G C  GK+++A +++ EMK     P+ + +
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            TL+  F +    + A ++   + + G + DI+++NI L GLC   +I +A+G L     
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667

Query: 408 DGIYLNKASYRIVLNFSCQKGEL 430
            G+     ++ I++      G L
Sbjct: 668 RGVLPTAITWNILVRAVLDNGAL 690


>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 472

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 233/446 (52%), Gaps = 13/446 (2%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
           K S+ I+    I L++ EK+ + ++ +F++ + +   G+ H+ +++  ++ +L    KF+
Sbjct: 9   KWSKNITPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFK 68

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
           A + ++ +M  E C   E I L++ + +         L +FHK+     + PS KA  T 
Sbjct: 69  AAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCD-PSQKAYVTV 127

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR-GTLESAFEVLKEMKKS 231
           L +L+E NQ++LA  F K + + + L P     N+LIK  C+  GT+++  ++  EM K 
Sbjct: 128 LAILVEENQLNLAFKFYK-NMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKR 186

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
               P+  TY TLI GLC+ GR  EA +LF EMV KD   P  +TY  LI+G C    VD
Sbjct: 187 GCD-PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVD 244

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A + +E MK  G  PNVF Y++LM+G CK+G+  +A E+F+ M     +P+ + YTTLI
Sbjct: 245 EAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
              C+  ++ EA+ELL  M  +G K D   +  ++ G C   K  EA   L+++   GI 
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGIT 364

Query: 412 LNKASYRIVLNFSCQ------KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
            N+ ++ I +  S +           +A  L   M  RG      T + L+  LCK G  
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEF 424

Query: 466 EDAAIALFGLVEMGFKPESDSWALLV 491
           + A   +  +V  G  P   +W LL+
Sbjct: 425 QKAVQLVDEIVTDGCIPNKGTWKLLI 450



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 156/328 (47%), Gaps = 14/328 (4%)

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           +Y+N +L  + +   F  ++         ++A +++  MK       N +    ++  +C
Sbjct: 42  EYANGYLHDQSS---FGYMVSRLVSANKFKAAEDIVARMK-----IENCVVSEDILLSIC 93

Query: 250 KN-GRFR---EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           +  GR     +++ +F +M   D   P    Y  ++       +++ A K  + M+  G 
Sbjct: 94  RGYGRVHRPFDSLRVFHKMKDFD-CDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGL 152

Query: 306 NPNVFNYTTLMNGFCK-EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
            P V +   L+   C+ +G +    ++F EM      PD+  Y TLI+  CR GR+DEA 
Sbjct: 153 PPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +L  EM E+ C   +VT+  ++ GLC    ++EA+  +E++   GI  N  +Y  +++  
Sbjct: 213 KLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGL 272

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G   +A+EL  +M+ RG  P+  T   L+  LCK    ++A   L  +   G KP++
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332

Query: 485 DSWALLVELICRGRKLLFAFELLDELVI 512
             +  ++   C   K   A   LDE+++
Sbjct: 333 GLYGKVISGFCAVSKFREAANFLDEMIL 360



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 124/279 (44%), Gaps = 45/279 (16%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG-GKVDR---AKK 295
           ++  ++  L    +F+ A    E++V++ +I    ++ ++L+   CRG G+V R   + +
Sbjct: 53  SFGYMVSRLVSANKFKAA----EDIVARMKIENCVVSEDILL-SICRGYGRVHRPFDSLR 107

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   MK+  C+P+   Y T++    +E +L  A + +  M+   L P       LI   C
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167

Query: 356 R-AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           R  G VD  L++  EM +RGC  D  T+  ++ GLCR G+I                   
Sbjct: 168 RNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRI------------------- 208

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
                           ++A +L   M+ +   P   T   L+  LC +   ++A   +  
Sbjct: 209 ----------------DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEE 252

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +   G +P   +++ L++ +C+  + L A EL + ++ +
Sbjct: 253 MKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 16/203 (7%)

Query: 322 EGKLQEAKEVFDEM-----KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           E  ++++  VFD         +L    + GY  +++    A +   A +++  MK   C 
Sbjct: 26  EKDVEKSIAVFDSATAEYANGYLHDQSSFGY--MVSRLVSANKFKAAEDIVARMKIENC- 82

Query: 377 ADIVTFNIILGGLCRE-GKIE---EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
             +V+ +I+L  +CR  G++    ++L +  K+       ++ +Y  VL    ++ +L  
Sbjct: 83  --VVSEDILLS-ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNL 139

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLV 491
           A +  + M   G  P  A+ N L+  LC+     DA + +F  + + G  P+S ++  L+
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLI 199

Query: 492 ELICRGRKLLFAFELLDELVIKE 514
             +CR  ++  A +L  E+V K+
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKD 222


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 233/446 (52%), Gaps = 13/446 (2%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
           K S+ I+    I L++ EK+ + ++ +F++ + +   G+ H+ +++  ++ +L    KF+
Sbjct: 9   KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
           A + ++ +M  E C   E I L++ + +         L +FHK+     + PS KA  T 
Sbjct: 69  AAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCD-PSQKAYVTV 127

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR-GTLESAFEVLKEMKKS 231
           L +L+E NQ++LA  F K + + + L P     N+LIK  C+  GT+++  ++  EM K 
Sbjct: 128 LAILVEENQLNLAFKFYK-NMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
               P+  TY TLI GLC+ GR  EA +LF EMV KD   P  +TY  LI+G C    VD
Sbjct: 187 GCD-PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVD 244

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A + +E MK+ G  PNVF Y++LM+G CK+G+  +A E+F+ M     +P+ + YTTLI
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
              C+  ++ EA+ELL  M  +G K D   +  ++ G C   K  EA   L+++   GI 
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364

Query: 412 LNKASYRIVLNFSCQ------KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
            N+ ++ I +  S +           +A  L   M  RG      T   L+  LCK G  
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424

Query: 466 EDAAIALFGLVEMGFKPESDSWALLV 491
           + A   +  +V  G  P   +W LL+
Sbjct: 425 QKAVQLVDEIVTDGCIPSKGTWKLLI 450



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 139/286 (48%), Gaps = 6/286 (2%)

Query: 232 QMSYPNLITYSTLIDGLCKN-GRFR---EAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           +M   N +    ++  +C+  GR     +++ +F +M   D   P    Y  ++      
Sbjct: 76  RMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFD-CDPSQKAYVTVLAILVEE 134

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK-EGKLQEAKEVFDEMKNFLLKPDTIG 346
            +++ A K  + M+  G  P V +   L+   C+ +G +    ++F EM      PD+  
Sbjct: 135 NQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYT 194

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y TLI+  CR GR+DEA +L  EM E+ C   +VT+  ++ GLC    ++EA+  LE++ 
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             GI  N  +Y  +++  C+ G   +A+EL  +M+ RG  P+  T   L+  LCK    +
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           +A   L  +   G KP++  +  ++   C   K   A   LDE+++
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 113/242 (46%), Gaps = 1/242 (0%)

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D  ++  ++       K   A+ ++  MK   C  +     ++  G+ +  +  ++  VF
Sbjct: 50  DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR- 391
            +MK+F   P    Y T++       +++ A +  K M+E G    + + N+++  LCR 
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +G ++  L +  ++   G   +  +Y  +++  C+ G +++A +L   M+ +   P   T
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L+  LC +   ++A   L  +   G +P   +++ L++ +C+  + L A EL + ++
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289

Query: 512 IK 513
            +
Sbjct: 290 AR 291



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 25/234 (10%)

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-----KNFLLKPDTIGY 347
             K+M F  +    P+      LM     E  ++++  VFD         ++    + GY
Sbjct: 2   GSKVMMFKWSKNITPS--QVIKLMRA---EKDVEKSMAVFDSATAEYANGYVHDQSSFGY 56

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE-GKIE---EALGMLE 403
             L      A +   A +L+  MK   C   +V+ +I+L  +CR  G++    ++L +  
Sbjct: 57  MVLR--LVSANKFKAAEDLIVRMKIENC---VVSEDILLS-ICRGYGRVHRPFDSLRVFH 110

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+       ++ +Y  VL    ++ +L  A +  + M   G  P  A+ N L+  LC+  
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170

Query: 464 MAEDAAIALFGLVEM---GFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
              DA + +F  +EM   G  P+S ++  L+  +CR  ++  A +L  E+V K+
Sbjct: 171 GTVDAGLKIF--LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 244/445 (54%), Gaps = 13/445 (2%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF-L 134
           QC+  + +     K    ++ TY T+++ L++  + +    +L +M      F   +F  
Sbjct: 25  QCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN--GFAPNVFSY 82

Query: 135 NLMKH-FSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           N + H F   +  E  L +  ++  + R   P + + +T +N L + +QVD A   +   
Sbjct: 83  NTVLHGFCKANRVENALWLLEQM--VMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 140

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKN 251
            Q    +PN   +  L+   C+ G L+ A E++++M  ++  Y PN ITY+ ++ GLC  
Sbjct: 141 IQR-GCQPNVITYGTLVDGFCRVGDLDGAVELVRKM--TERGYRPNAITYNNIMHGLCSG 197

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +   A++LF+EM       PD  TY+ ++D   + GKVD A +++E M + GC+PNV  
Sbjct: 198 RKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVT 257

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y++L++G CK GKL EA  +   M      P+ + Y T+I+  C+ GR+DEA  LL+EM 
Sbjct: 258 YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV 317

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           + GC+ ++VT+ ++L   C+ GK E+A+G++E +   G   N  +Y  +L+  C+K E+E
Sbjct: 318 DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVE 377

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +A +LL  M+ +G +P+  + N ++  LCKA    +  + L  ++     P+  ++  ++
Sbjct: 378 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTII 437

Query: 492 ELICRGRKLLFAFELLDELVIKESG 516
           + +C+  ++  A+EL +  +I+ESG
Sbjct: 438 DAMCKTYRVDIAYELFN--LIQESG 460



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 218/430 (50%), Gaps = 7/430 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
             GF  N  +Y T+L    +  + E    +L QM    C      +  ++         +
Sbjct: 72  DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
               +  K+  I R  +P++    T ++       +D A   ++   +    +PN   +N
Sbjct: 132 EACRVMDKM--IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER-GYRPNAITYN 188

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            ++   C    L+SA ++ KEM++S    P++ TYST++D L K+G+  +A  L E MVS
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVS 248

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K    P+ +TY+ L+ G C+ GK+D A  +++ M  +GC+PN+  Y T+++G CK G++ 
Sbjct: 249 K-GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 307

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  + +EM +   +P+ + YT L++ FC+ G+ ++A+ L++ M E+G   ++ T+N +L
Sbjct: 308 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 367

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
              C++ ++E A  +L  +   G   N  SY  V+   C+  ++ + + LL  ML    +
Sbjct: 368 DMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV 427

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLV-EMGFKPESDSWALLVELICRGRKLLFAFE 505
           P   T N ++  +CK     D A  LF L+ E G  P   ++  LV  +C+ R+   A  
Sbjct: 428 PDIVTFNTIIDAMCKT-YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 486

Query: 506 LLDELVIKES 515
           LL E+  K+ 
Sbjct: 487 LLREMTRKQG 496



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 229/432 (53%), Gaps = 11/432 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG + N  TY+++L  L +  K +   A+L++MT   C  +   +  ++    +C L  
Sbjct: 248 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID--GHCKLG- 304

Query: 148 RVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           R+ E +H +  +     +P++   +  L+   +  + + A   ++   +   + PN   +
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV-PNLFTY 363

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N L+   CK+  +E A ++L  M + +   PN+++Y+T+I GLCK  +  E + L E+M+
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQ-KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 422

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           S + + PD +T+N +ID  C+  +VD A ++   ++ +GC PN+  Y +L++G CK  + 
Sbjct: 423 SNNCV-PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 481

Query: 326 QEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            +A+ +  EM +     PD I Y T+I+  C++ RVD A +L  +M   G   D VT++I
Sbjct: 482 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 541

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LC+   ++EA  +LE +  +G      +Y  +++  C+ G L+KA+E+L+L+L +G
Sbjct: 542 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 601

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T +  +  L K G    A   L  ++  G  P++ ++  L++  C   +   A 
Sbjct: 602 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAV 661

Query: 505 ELLDELVIKESG 516
           +L +  V+++ G
Sbjct: 662 DLFE--VMRQCG 671



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 209/408 (51%), Gaps = 11/408 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G + N  TY TI+D   +  + +    +L +M    C+ +   +  L+  F  C   E
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 342

Query: 148 RVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
             + +      +  EK   P+L   ++ L++  + ++V+ A   L    Q     PN   
Sbjct: 343 DAIGLVE----VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVS 397

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N +I   CK   +     +L++M  S    P+++T++T+ID +CK  R   A ELF  +
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQML-SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN-L 455

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEG 323
           + +    P+ +TYN L+ G C+  + D+A+ ++ E  +  GC+P++  Y T+++G CK  
Sbjct: 456 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 515

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++  A ++F +M +  L PD + Y+ +I+  C+   +DEA  +L+ M + G     +T+ 
Sbjct: 516 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 575

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G C+ G +++AL +L+ L   G Y +  ++ I +++  ++G L +A ELL  ML  
Sbjct: 576 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 635

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           G +P   T N LL   C A   EDA      + + G +P++ ++  LV
Sbjct: 636 GLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 154/271 (56%), Gaps = 3/271 (1%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           + +++ GLC  G+  +A+  F EM       PD++TYN +I+G  +  ++D A +++E M
Sbjct: 13  HKSILRGLCDAGQCSDAVLHFREM--SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
            +NG  PNVF+Y T+++GFCK  +++ A  + ++M      PD + YTT+IN  C+  +V
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEA  ++ +M +RGC+ +++T+  ++ G CR G ++ A+ ++ K+   G   N  +Y  +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFL-PHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++  C   +L+ A++L + M   G   P   T + ++  L K+G  +DA   +  +V  G
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
             P   +++ L+  +C+  KL  A  LL  +
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281


>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 459

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 226/388 (58%), Gaps = 5/388 (1%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           ++P+ AL +F+   E  GF H+  +Y++++ KLA+ + F+AVD +LR + Y   +  E +
Sbjct: 60  EDPEEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F+ L++H+      ++ +++FHK+      + ++++++T +N+L+++ +++ A++F    
Sbjct: 119 FMALIQHYGKAGWVDKAVDVFHKLTSFDCVR-TIQSLNTLINVLVDNGELEKAKSFFD-G 176

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            + +RL+PN+  FNILIK    +   E+A +V  EM + ++  P+++TY++LI  LC+N 
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQ-PSVVTYNSLIGFLCRNN 235

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              +A  L E+M+ K +I P+A+T+ +L+ G C  G+ + AKK+M  M+  GC P + NY
Sbjct: 236 DMGKATSLLEDMIKK-RIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNY 294

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             LM+   K GK+ EAK +  EMK   +KPD + Y  L+N  C  GRV EA   L EM+ 
Sbjct: 295 GVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQM 354

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +GCK +  T+ +I+ G CR G  +  L +L  +         A++  +++   + G L+ 
Sbjct: 355 KGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDH 414

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLC 460
           A  +L +M  +     Y+    LL  LC
Sbjct: 415 ACFVLEVMGKKKLSFGYSAWQNLLCDLC 442



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 176/387 (45%), Gaps = 48/387 (12%)

Query: 147 ERVLEMFHKIHPIT--REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           E  L +FH+   +    + PS  ++   L      + VD     ++Y N   R      +
Sbjct: 63  EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCR----ESL 118

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F  LI+H+ K G ++ A +V  ++  S      + + +TLI+ L  NG   +A   F+  
Sbjct: 119 FMALIQHYGKAGWVDKAVDVFHKLT-SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG- 176

Query: 265 VSKD-QILPDALTYNVLIDGF-----------------------------------CRGG 288
            +KD ++ P+++++N+LI GF                                   CR  
Sbjct: 177 -AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNN 235

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            + +A  ++E M      PN   +  LM G C  G+  EAK++  +M+    KP  + Y 
Sbjct: 236 DMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYG 295

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            L++   + G++DEA  LL EMK+R  K D V +NI++  LC EG++ EA   L ++   
Sbjct: 296 VLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMK 355

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N A+YR++++  C+ G+ +  + +L  ML     P  AT   ++  L K G  + A
Sbjct: 356 GCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHA 415

Query: 469 AIALFGLVEMGFKPESDSWALLVELIC 495
               F L  MG K  S  ++    L+C
Sbjct: 416 C---FVLEVMGKKKLSFGYSAWQNLLC 439



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 130/256 (50%), Gaps = 1/256 (0%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           +  LI    K G   +A+++F ++ S D +     + N LI+     G++++AK   +  
Sbjct: 119 FMALIQHYGKAGWVDKAVDVFHKLTSFDCVRT-IQSLNTLINVLVDNGELEKAKSFFDGA 177

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           K+    PN  ++  L+ GF  +   + A +VFDEM    ++P  + Y +LI   CR   +
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDM 237

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            +A  LL++M ++  + + VTF +++ GLC  G+  EA  ++  + Y G      +Y ++
Sbjct: 238 GKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVL 297

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++   ++G++++A  LL  M  R   P +   N L+  LC  G   +A   L  +   G 
Sbjct: 298 MSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGC 357

Query: 481 KPESDSWALLVELICR 496
           KP + ++ ++V+  CR
Sbjct: 358 KPNAATYRMIVDGFCR 373


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 236/469 (50%), Gaps = 43/469 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE    ++E+K    +  TY  ++D L +  K +    +L +M           F ++M
Sbjct: 245 ALEFLKEMNERK-VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIM 303

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
                    ER     H +  +  E+   PS    +T ++ L +   VD A++ +     
Sbjct: 304 DGLCKAGKFERA----HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVS 359

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
                P+   ++IL    CKRG ++ AFE++KEM     + PNL+TY+TLIDGLCK  + 
Sbjct: 360 S-GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCT-PNLVTYNTLIDGLCKASKT 417

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A EL E +VS    +PD +TY +++DG C+ G++D+A K++E M   GC P+V  YT 
Sbjct: 418 EKAYELLESLVSSG-FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 476

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA----------------- 357
           LM G C+ G++ EA  +F EM +     D + Y +L+N +C++                 
Sbjct: 477 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTP 536

Query: 358 ---------------GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
                          GR+DE   + ++M  RGC  +I T+NI++ GLC+ GK++EA   L
Sbjct: 537 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 596

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           E +   G   +  SY I+++   +  + ++A ++L  M+  G  P   T N L+ + CK 
Sbjct: 597 ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 656

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              +DA   L  +++ G  P++ ++  L+  + +  +L  A+EL+ E++
Sbjct: 657 ERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 223/438 (50%), Gaps = 9/438 (2%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           K+PQ A+ +F   +  +GF H+  T    L  L      + + A+  +M           
Sbjct: 104 KDPQTAI-VFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYT 162

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           +  ++K     +  ++   M  K   +   KP +   +       ++ ++  A    +  
Sbjct: 163 YHLVIKSLCQMNQIDKAFTMLDKAK-VRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                  P+   +N +I  HC++   + A E LKEM + +++ P++ TY+ LIDGLCK  
Sbjct: 222 PS-----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVA-PDVFTYNILIDGLCKAS 275

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +A E+  EMV +  + PD +T+N ++DG C+ GK +RA  ++  M    C P+   Y
Sbjct: 276 KTDKASEMLHEMVDRG-VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTY 334

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            TL++G CK+  +  AK++ DE  +    PD + Y+ L +  C+ GR+DEA EL+KEM  
Sbjct: 335 NTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSG 394

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +GC  ++VT+N ++ GLC+  K E+A  +LE L   G   +  +Y I+++  C++G L+K
Sbjct: 395 KGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDK 454

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A++++  ML RG  P   T   L+  LC+ G  ++A      +V      ++ ++  LV 
Sbjct: 455 ALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVN 514

Query: 493 LICRGRKLLFAFELLDEL 510
             C+  +   A +++D +
Sbjct: 515 GYCKSSRTKEAQKVVDGI 532



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 179/339 (52%), Gaps = 7/339 (2%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L + NQ+D A   L  +      KP   ++ IL +  CK G L+ A E+ + +       
Sbjct: 170 LCQMNQIDKAFTMLDKAKVR-GFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----- 223

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+ I Y+ +I G C+      A+E  +EM ++ ++ PD  TYN+LIDG C+  K D+A +
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEM-NERKVAPDVFTYNILIDGLCKASKTDKASE 282

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M + G  P+   + ++M+G CK GK + A  +   M     +P    Y TLI+  C
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +   VD A +L+ E    G   D+VT++I+  GLC+ G+I+EA  +++++   G   N  
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C+  + EKA ELL  ++  GF+P   T   ++  LCK G  + A   + G+
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           ++ G  P   ++  L+E +CR  ++  A  +  E+V K+
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 501



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 208/415 (50%), Gaps = 19/415 (4%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  ++ TY  ++  L +  + +    +L +      K    ++  L + F      +  
Sbjct: 155 GYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA 214

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIF 205
           LE+F  I       PS  AI+   N +I      N  D A  FLK  N+  ++ P+   +
Sbjct: 215 LEIFRNI-------PSPDAIA--YNAIIHGHCRKNDCDGALEFLKEMNER-KVAPDVFTY 264

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           NILI   CK    + A E+L EM    ++ P+ +T+++++DGLCK G+F  A  L   M 
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVT-PDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            ++   P   TYN LI G C+   VDRAK +++   ++G  P+V  Y+ L +G CK G++
Sbjct: 324 ERN-CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI 382

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA E+  EM      P+ + Y TLI+  C+A + ++A ELL+ +   G   D+VT+ II
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTII 442

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC+EG++++AL M+E +   G   +  +Y  ++   C+ G +++A  + + M+ +  
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                    L+   CK+   ++A   + G+      P  D +  L++  C+  +L
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRL 554



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 227/489 (46%), Gaps = 68/489 (13%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK-------------------- 127
            +G   +  T+ +I+D L +  KFE   ++L  M    C+                    
Sbjct: 289 DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVD 348

Query: 128 --------FHEGIFLNLMKHFS----NCSLHERVLEMFHKIHPITRE--KPSLKAISTCL 173
                   F    F+  +  +S          R+ E F  +  ++ +   P+L   +T +
Sbjct: 349 RAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLI 408

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
           + L ++++ + A   L+ S       P+   + I++   CK G L+ A ++++ M K   
Sbjct: 409 DGLCKASKTEKAYELLE-SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 467

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD------------------------Q 269
           + P++ITY+ L++GLC+ GR  EA  +F+EMVSKD                        Q
Sbjct: 468 T-PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526

Query: 270 ILPDAL-------TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            + D +        YN L+DG+C+ G++D    + E M   GC PN+  Y  +M+G CK 
Sbjct: 527 KVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 586

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK+ EA    + M +    PD + Y  +I+   +A +  EA ++L +M + G   D VT+
Sbjct: 587 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTY 646

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++   C+E + ++A+G+L+ +   G+  +  +Y  +++   Q   L  A EL+  ML 
Sbjct: 647 NTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLR 706

Query: 443 RGFLPHYATS-NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            G +    T+ N ++ RLCK G  + A + +  +   G +  + ++ + ++ +C+  +L 
Sbjct: 707 NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLD 766

Query: 502 FAFELLDEL 510
            A  LL E+
Sbjct: 767 EASSLLSEM 775



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 215/463 (46%), Gaps = 51/463 (11%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  +  TY  I+D L +  + +    ++  M    C      +  LM+         RV
Sbjct: 431 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG---RV 487

Query: 150 LEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E  H    +  +  +  A++  + +N   +S++   AQ  +      +R  P   ++N 
Sbjct: 488 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV----DGIRGTPYIDVYNA 543

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+  +CK G L+    V ++M   +   PN+ TY+ ++DGLCK+G+  EA    E M S 
Sbjct: 544 LMDGYCKEGRLDEIPNVFEDMA-CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 602

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD ++YN++IDG  +  K   A+++++ M   G  P+   Y TLM  FCKE +  +
Sbjct: 603 GCV-PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI-VTFNIIL 386
           A  +   M    + PD + Y TLI+   +  R+ +A EL+ EM   GC      T+N I+
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 721

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC+EG +++AL +++ +   G+  N  +Y I ++  C++G L++A  LL  M     L
Sbjct: 722 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTL 778

Query: 447 PHYATSNELLVRLCKAGMAE-----------------------------------DAAIA 471
               +   +++ LCKA   +                                   D A+ 
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 838

Query: 472 LFGL-VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L GL V+ G  P   ++ +++  +C+  K+  A+EL DE+ ++
Sbjct: 839 LLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 881



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 176/374 (47%), Gaps = 11/374 (2%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           Y  ++D   +  + + +  V   M    C  +   +  +M        H +V E F  + 
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK---HGKVDEAFPFLE 597

Query: 158 PITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
            +      P + + +  ++ L ++++   A+  L    Q   + P+   +N L+   CK 
Sbjct: 598 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQFCKE 656

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
              + A  +LK M K+ +  P+ +TY+TLI GL +  R  +A EL  EM+    ++    
Sbjct: 657 ERFDDAVGILKNMIKAGVD-PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 715

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYN +ID  C+ G + +A  +M+ M  +G   N   Y   ++  CKEG+L EA  +  EM
Sbjct: 716 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE-RGCKADIVTFNIILGGLCREGK 394
                  D + YTT+I   C+A ++D A +L +EM   +G      TFN+++    +  +
Sbjct: 776 DTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKR 832

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++EAL +L  +   G   +  +Y +V+   C+  +++KA EL   M  RG +    +   
Sbjct: 833 LDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 892

Query: 455 LLVRLCKAGMAEDA 468
           L+  LC  G  ++A
Sbjct: 893 LIYGLCGQGRGKEA 906



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 11/294 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   +  TY T++ +  + ++F+    +L+ M           +  L+   S  S   
Sbjct: 636 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI---SGLSQTN 692

Query: 148 RVLEMFHKIHPITREKPSLKAIST---CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           R+ + +  +H + R    + A +T    ++ L +   +  A   + +   H  ++ NT  
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH-GVEANTVT 751

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +NI I   CK G L+ A  +L EM     +  + ++Y+T+I GLCK  +   A +L  EM
Sbjct: 752 YNIFIDRLCKEGRLDEASSLLSEMD----TLRDEVSYTTVIIGLCKAEQLDRASKLAREM 807

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V+   +   + T+N+LID F +  ++D A  ++  M   GC+P+V  Y  ++   CK  K
Sbjct: 808 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDK 867

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           + +A E+FDEM    +   ++ YT LI   C  GR  EAL++L+EM    C+ D
Sbjct: 868 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 146/318 (45%), Gaps = 23/318 (7%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           +Y  I+D L +  K +    VL QM           +  LM  F      ER  +    +
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCK---EERFDDAVGIL 666

Query: 157 HPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI------FNIL 208
             + +    P     +T ++ L ++N++  A     Y   H  L+ N C+      +N +
Sbjct: 667 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDA-----YELMHEMLR-NGCVVSACTTYNTI 720

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G L+ A  ++  M    +   N +TY+  ID LCK GR  EA  L  EM    
Sbjct: 721 IDRLCKEGCLKQALLLMDHMTGHGVE-ANTVTYNIFIDRLCKEGRLDEASSLLSEM---- 775

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             L D ++Y  +I G C+  ++DRA K+  E +   G       +  L++ F K  +L E
Sbjct: 776 DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 835

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +   M      P  I Y  +I C C+  +VD+A EL  EM  RG  A  V++ +++ 
Sbjct: 836 ALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIY 895

Query: 388 GLCREGKIEEALGMLEKL 405
           GLC +G+ +EAL +LE++
Sbjct: 896 GLCGQGRGKEALQVLEEM 913


>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
          Length = 486

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 228/423 (53%), Gaps = 5/423 (1%)

Query: 10  KCCRFSSFSTSSSSLPWISPLEVIKANTPKAD-PPVETSDTCVDARKRSRFISHGAAISL 68
           + C     S  +  LP++  L    + + K D     +     + R  SR ++      L
Sbjct: 47  RSCLLPKPSWITKPLPFLRTLHKFSSYSSKGDRSDSSSISCSSNIRNHSRMLTPARVHKL 106

Query: 69  IKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF 128
           I  + +   A+EIF   S Q GF H+ +TY T++ KL R ++F+ ++ +++QM  + C +
Sbjct: 107 IASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPY 166

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
             G+F+++++ +    +    ++ FH++     E P  K  +  L +LIE   ++ A + 
Sbjct: 167 TPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYE-PLAKHFNVLLIVLIEHKCLETALSL 225

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
            K  ++   + PNT  +NILI+ HC    L  A+ +  +M K Q   P++ TYS L+ GL
Sbjct: 226 FKKLHE-FGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHK-QGCIPDVETYSILMQGL 283

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C+  + + A+ + +EM++K  + PDALTYN L++  CR   +  A +++  MK  GCNP+
Sbjct: 284 CRKSQVKTALGVLDEMLNKGYV-PDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPD 342

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           V NY T++ GFC+EG+  +A ++  +M      P+ + Y TL+N  C  G+ DEA + ++
Sbjct: 343 VINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVE 402

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM   G    I  +++++ GLC EGK+ EA  +L  +    +  +++++ ++L   C+  
Sbjct: 403 EMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDS 462

Query: 429 ELE 431
           + E
Sbjct: 463 QTE 465



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 167/377 (44%), Gaps = 56/377 (14%)

Query: 179 SNQVD--LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG---TLESAFEVLKEMKKSQM 233
           ++Q D  LA    + +++    K +   ++ LI   CK G     ++   ++++M+K   
Sbjct: 108 ASQTDALLAMEIFEVASRQPGFKHSYSTYHTLI---CKLGRARQFKTMEGLIQQMRKDGC 164

Query: 234 SY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL----IDGFCRGG 288
            Y P L  +  +I+   + G   EAI+ F +M+ +    P A  +NVL    I+  C   
Sbjct: 165 PYTPGL--FVDIIEIYGEVGMPNEAIKAFHQML-EFGYEPLAKHFNVLLIVLIEHKCLET 221

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            +   KK+ EF    G +PN   Y  L+   C   KL  A  +F++M      PD   Y+
Sbjct: 222 ALSLFKKLHEF----GISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYS 277

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG--------------------- 387
            L+   CR  +V  AL +L EM  +G   D +T+N +L                      
Sbjct: 278 ILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVM 337

Query: 388 --------------GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
                         G CREG+  +A  +L  +  +G   N  SYR ++N  C +G+ ++A
Sbjct: 338 GCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEA 397

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            + +  M+  GF+PH +  + L+  LC  G   +A   L  + +    P   +W++L+  
Sbjct: 398 KDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMR 457

Query: 494 ICRGRKLLFAFELLDEL 510
           IC   +   A EL+D+L
Sbjct: 458 ICEDSQTE-ARELVDKL 473



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 8/292 (2%)

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE--AIELFEEMVSKDQILPDALTYNV 279
           FEV       + SY    TY TLI   CK GR R+   +E   + + KD        +  
Sbjct: 120 FEVASRQPGFKHSYS---TYHTLI---CKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVD 173

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +I+ +   G  + A K    M   G  P   ++  L+    +   L+ A  +F ++  F 
Sbjct: 174 IIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFG 233

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P+T  Y  LI   C + ++  A  L  +M ++GC  D+ T++I++ GLCR+ +++ AL
Sbjct: 234 ISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTAL 293

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
           G+L+++   G   +  +Y  +LN  C+K  L +A  LL  M   G  P     N ++   
Sbjct: 294 GVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGF 353

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           C+ G A DA   L  + E G  P + S+  LV  +C   K   A + ++E++
Sbjct: 354 CREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMI 405



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 11/209 (5%)

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFL--LKPDTIGYTT-----LINCFCRAGRVDEA 363
           +Y+T     CK G+ ++    F  M+  +  ++ D   YT      +I  +   G  +EA
Sbjct: 132 SYSTYHTLICKLGRARQ----FKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEA 187

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           ++   +M E G +     FN++L  L     +E AL + +KL   GI  N  +Y I++  
Sbjct: 188 IKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRA 247

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C   +L  A  L   M  +G +P   T + L+  LC+    + A   L  ++  G+ P+
Sbjct: 248 HCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPD 307

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVI 512
           + ++  L+  +CR   L  A+ LL ++ +
Sbjct: 308 ALTYNTLLNSLCRKMNLREAYRLLSKMKV 336


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 238/463 (51%), Gaps = 14/463 (3%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
           K  + I++     LIK EK+    L +F++ +E+   GF H++ T+  ++ +L    +F 
Sbjct: 8   KWPKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFR 67

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
             + +L +M  E C+  E +FL + + +         + +FHK+    + KP+ K+  T 
Sbjct: 68  PAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDF-QVKPTQKSYLTV 126

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK-RGTLESAFEVLKEMKKS 231
            ++L+E N V  A  F K   +   + P     NILIK  CK   T+ESAF + +EM  +
Sbjct: 127 FDILVEENHVKRAIGFYKEMREK-GIPPTVVSLNILIKALCKNEETVESAFRLFREM-PN 184

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           +   P+  TY TLI+GLCK G+  +A EL +EM  K  + P  ++Y  LI G C+   +D
Sbjct: 185 RGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKG-LSPSVVSYTSLIHGLCQSNNLD 243

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A +++E M  NG  PNVF Y++LM+G CK G   +A E+ + M    L P+ + Y+TLI
Sbjct: 244 EAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLI 303

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+ G+  EA+E+L  M+ +G K D   +  I+ GLC     +EA   ++++   GI 
Sbjct: 304 NGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGIS 363

Query: 412 LNKASY-------RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            N+AS+        +V+   C   +  +A +L   M  RG      T + L+   CK G 
Sbjct: 364 PNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGD 423

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              AA  L  ++  G  P+   W +L+  +   +K+    ELL
Sbjct: 424 LNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELL 466



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 159/324 (49%), Gaps = 6/324 (1%)

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           +YSN   R   NT  F  +I           A  +L+ MK+        + + T+  G  
Sbjct: 41  EYSNG-FRHDHNT--FGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDV-FLTICRGYG 96

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           +  R  +AI +F +M    Q+ P   +Y  + D       V RA    + M+  G  P V
Sbjct: 97  RVHRPLDAIRVFHKM-EDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTV 155

Query: 310 FNYTTLMNGFCK-EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
            +   L+   CK E  ++ A  +F EM N   +PD+  Y TLIN  C+ G++ +A ELL 
Sbjct: 156 VSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLD 215

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM+E+G    +V++  ++ GLC+   ++EA+ +LE++  +GI  N  +Y  +++  C+ G
Sbjct: 216 EMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSG 275

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
              +A+ELL +M+ R  LP+  T + L+  LCK G   +A   L  +   G KP++  + 
Sbjct: 276 HSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYG 335

Query: 489 LLVELICRGRKLLFAFELLDELVI 512
            ++  +C       A   +DE+ +
Sbjct: 336 RIISGLCAACNYQEAANFIDEMAL 359


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 230/452 (50%), Gaps = 46/452 (10%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY  ++D L +  K +    +L +M           F ++M         ER     H +
Sbjct: 12  TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA----HSL 67

Query: 157 HPITREK---PSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKH 211
             +  E+   PS    +T ++ L +   VD A+  +    S+  +   P+   ++IL   
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV---PDVVTYSILADG 124

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CKRG ++ AFE++KEM  +  + PNL+TY+TLIDGLCK  +  +A EL E +VS    +
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCT-PNLVTYNTLIDGLCKASKTEKAYELLETLVSS-GFV 182

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD +TY +++DG C+ G++D+A K++E M   GC P+V  YT LM G C+ G++ EA  +
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRA--------------------------------GR 359
           F EM +     D + Y +L+N +C++                                GR
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGR 302

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +DE   + ++M  RGC  +I T+NI++ GLC+ GK++EA   LE +   G   +  SY I
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++   +  + ++A ++L  M+  G  P   T N L+ + CK    +DA   L  +++ G
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 422

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
             P++ ++  L+  + +  +L  A+EL+ E++
Sbjct: 423 VDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 156/273 (57%), Gaps = 1/273 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++ TY+ LIDGLCK  +  +A E+  EMV +  + PD +T+N ++DG C+ GK +RA  
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDR-GVTPDTVTFNSIMDGLCKAGKFERAHS 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M    C P+   Y TL++G CK+  +  AK + DE  +    PD + Y+ L +  C
Sbjct: 67  LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + GR+DEA EL+KEM   GC  ++VT+N ++ GLC+  K E+A  +LE L   G   +  
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y I+++  C++G L+KA++++  ML RG  P   T   L+  LC+ G  ++A      +
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
           V      ++ ++  LV   C+  +   A +++D
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 279



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 226/489 (46%), Gaps = 68/489 (13%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK-------------------- 127
            +G   +  T+ +I+D L +  KFE   ++L  M    C+                    
Sbjct: 38  DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVD 97

Query: 128 --------FHEGIFLNLMKHFS----NCSLHERVLEMFHKIHPITRE--KPSLKAISTCL 173
                   F    F+  +  +S          R+ E F  +  ++     P+L   +T +
Sbjct: 98  RAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLI 157

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
           + L ++++ + A   L+ +       P+   + I++   CK G L+ A ++++ M K   
Sbjct: 158 DGLCKASKTEKAYELLE-TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 216

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD------------------------Q 269
           + P++ITY+ L++GLC+ GR  EA  +F+EMVSKD                        Q
Sbjct: 217 T-PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 275

Query: 270 ILPDAL-------TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            + D +        YN L+DG+C+ G++D    + E M   GC PN+  Y  +M+G CK 
Sbjct: 276 KVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 335

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK+ EA    + M +    PD + Y  +I+   +A +  EA ++L +M + G   D VT+
Sbjct: 336 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTY 395

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++   C+E + ++A+G+L+ +   G+  +  +Y  +++   Q   L  A EL+  ML 
Sbjct: 396 NTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLR 455

Query: 443 RGFLPHYATS-NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            G +    T+ N ++ RLCK G  + A + +  +   G +  + ++ + ++ +C+  +L 
Sbjct: 456 NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLD 515

Query: 502 FAFELLDEL 510
            A  LL E+
Sbjct: 516 EASSLLSEM 524



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 221/475 (46%), Gaps = 52/475 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+  T+    GF  +  TY  I+D L +  + +    ++  M    C      +  LM
Sbjct: 169 AYELLETLV-SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 227

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQH 195
           +         RV E  H    +  +  +  A++  + +N   +S++   AQ  +      
Sbjct: 228 EGLCRTG---RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV----DG 280

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +R  P   ++N L+  +CK G L+    V ++M   +   PN+ TY+ ++DGLCK+G+  
Sbjct: 281 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMA-CRGCVPNIKTYNIVMDGLCKHGKVD 339

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA    E M S   + PD ++YN++IDG  +  K   A+++++ M   G  P+   Y TL
Sbjct: 340 EAFPFLESMHSAGCV-PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M  FCKE +  +A  +   M    + PD + Y TLI+   +  R+ +A EL+ EM   GC
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458

Query: 376 KADI-VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
                 T+N I+  LC+EG +++AL +++ +   G+  N  +Y I ++  C++G L++A 
Sbjct: 459 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 518

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA------IALFGL------------- 475
            LL  M     L    +   +++ LCKA   + A+      +A+ GL             
Sbjct: 519 SLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 575

Query: 476 -----------------VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                            V+ G  P   ++ +++  +C+  K+  A+EL DE+ ++
Sbjct: 576 FTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 630



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 165/304 (54%), Gaps = 5/304 (1%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ P+   +NILI   CK    + A E+L EM    ++ P+ +T+++++DGLCK G+F  
Sbjct: 5   KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT-PDTVTFNSIMDGLCKAGKFER 63

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L   M  ++   P   TYN LI G C+   VDRAK +++   ++G  P+V  Y+ L 
Sbjct: 64  AHSLLAVMAERN-CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G CK G++ EA E+  EM      P+ + Y TLI+  C+A + ++A ELL+ +   G  
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+VT+ II+ GLC+EG++++AL M+E +   G   +  +Y  ++   C+ G +++A  +
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + M+ +           L+   CK+   ++A   + G+      P  D +  L++  C+
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCK 299

Query: 497 GRKL 500
             +L
Sbjct: 300 EGRL 303



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 135/246 (54%)

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
           ++ PD  TYN+LIDG C+  K D+A +++  M + G  P+   + ++M+G CK GK + A
Sbjct: 5   KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +   M     +P    Y TLI+  C+   VD A  L+ E    G   D+VT++I+  G
Sbjct: 65  HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC+ G+I+EA  +++++  +G   N  +Y  +++  C+  + EKA ELL  ++  GF+P 
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T   ++  LCK G  + A   + G+++ G  P   ++  L+E +CR  ++  A  +  
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244

Query: 509 ELVIKE 514
           E+V K+
Sbjct: 245 EMVSKD 250



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 173/381 (45%), Gaps = 46/381 (12%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           Y  ++D   +  + + +  V   M    C  +   +  +M        H +V E F  + 
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK---HGKVDEAFPFLE 346

Query: 158 PITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
            +      P + + +  ++ L ++++   A+  L    Q   + P+   +N L+   CK 
Sbjct: 347 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQFCKE 405

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
              + A  +LK M K+ +  P+ +TY+TLI GL +  R  +A EL  EM+    ++    
Sbjct: 406 ERFDDAVGILKNMIKAGVD-PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 464

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYN +ID  C+ G + +A  +M+ M  +G   N   Y   ++  CKEG+L EA  +  EM
Sbjct: 465 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524

Query: 336 KNFLLKPDTIGYTT------------------------------------LINCFCRAGR 359
                  D + YTT                                    LI+ F +  R
Sbjct: 525 DTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKR 581

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +DEAL LL+ M +RGC   ++T+N+++  LC+  K+++A  + +++   GI  +  SY +
Sbjct: 582 LDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 641

Query: 420 VLNFSCQKGELEKAIELLRLM 440
           ++   C +G  ++A+++L  M
Sbjct: 642 LIYGLCGQGRGKEALQVLEEM 662



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 158/321 (49%), Gaps = 11/321 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   +  TY T++ +  + ++F+    +L+ M           +  L+   S  +   
Sbjct: 385 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN--- 441

Query: 148 RVLEMFHKIHPITREKPSLKAIST---CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           R+ + +  +H + R    + A +T    ++ L +   +  A   + +   H  ++ NT  
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH-GVEANTVT 500

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +NI I   CK G L+ A  +L EM     +  + ++Y+T+I GLCK  +   A +L  EM
Sbjct: 501 YNIFIDRLCKEGRLDEASSLLSEMD----TLRDEVSYTTVIIGLCKAEQLDRASKLAREM 556

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V+   +   + T+N+LID F +  ++D A  ++E M   GC+P+V  Y  ++   CK  K
Sbjct: 557 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A E+FDEM    +   ++ YT LI   C  GR  EAL++L+EM    C+ D +    
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676

Query: 385 ILGGLCREGKIEEALGMLEKL 405
           +   L  +G+ EEA  +L ++
Sbjct: 677 LYLALRGQGRGEEAAELLRRM 697


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 241/476 (50%), Gaps = 44/476 (9%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P  AL  F+  S+Q+GF+HN  TY  + + L R ++ +    +L+        +  GI 
Sbjct: 3   DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKN------GWPPGIT 56

Query: 134 LNLMKHF-------------SNCSLHERVLEMF---------HKIHPITREKPSLKAIST 171
            N+  +                C L E + E             IH + + + + KA+  
Sbjct: 57  PNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY 116

Query: 172 CLNLLIESNQVDL---------AQNFLKYSNQHLRLK-----PNTCIFNILIKHHCKRGT 217
             ++  E N +           A    + +    ++K     PN   +N+LI   CK   
Sbjct: 117 FRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +  A+ +LKEMK+S ++ PN++TYST+I G C+  +   A +LF +MV ++  +P+ +TY
Sbjct: 177 VHRAYLLLKEMKESGLA-PNVVTYSTVIHGFCRQTKVDTAYKLFRQMV-ENGCMPNLVTY 234

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N L+ G CR G +D A ++++ M+  G  P+ F+Y TLM G CK GK+  A +VF++  N
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               PD + Y+TLI   C+AGR+DEA +L ++M+E  C+ D+VTF  ++ GLC+  +++E
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +LE +       N  +Y  +++  C+ G++  A E+ + M+ RG  P+  T N L+ 
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             C     + A + +  +   G  P+  ++  L++ +C+  +   A  L  ++  K
Sbjct: 415 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 222/423 (52%), Gaps = 17/423 (4%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
            Y+T++  L +  + +    +  +M   +C+     F  LM         +R+ E    +
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK---GDRLQEAQQVL 359

Query: 157 HPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHC 213
             +      P++   S+ ++ L ++ QV  AQ   K     +R ++PN   +N LI   C
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK--RMIVRGIEPNVVTYNSLIHGFC 417

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
               ++SA  +++EM  +    P++ITY+TLIDGLCK GR  EA  LF +M +K    PD
Sbjct: 418 MTNGVDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK-FCNPD 475

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TY+ LI GFC+  ++D A+ + + M      P+V  ++TL+ G+C  G + +A+ + +
Sbjct: 476 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 535

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           EM      PD   YT+L++ FC+ GR+ EA  +LK M +RGC+ ++VT+  ++   CR G
Sbjct: 536 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 595

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL----RLMLCRGFLPHY 449
           K   A  +LE++  +G+  N  +YR ++   C  G+LE+A ++L    R   C+  +  Y
Sbjct: 596 KPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAY 655

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
                ++  LC+ G    A   L  + + G  P  D +  L+  +C+G++L  A E+L+E
Sbjct: 656 RV---MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE 712

Query: 510 LVI 512
           + +
Sbjct: 713 MTL 715



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 214/428 (50%), Gaps = 10/428 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   N  TY+T++    R  K +    + RQM    C  +   +  L+       L 
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 247

Query: 147 ERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +   E+  ++    RE+   P   +  T +  L ++ ++D+A    +  N +    P+  
Sbjct: 248 DEAYELLDEM----RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE-DNSNGDCPPDVV 302

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            ++ LI   CK G L+ A ++ ++M+++    P+++T++ L+DGLCK  R +EA ++ E 
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCE-PDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  ++   P+ +TY+ LIDG C+ G+V  A+++ + M   G  PNV  Y +L++GFC   
Sbjct: 362 MEDRN-CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 420

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +  A  + +EM      PD I Y TLI+  C+ GR  EA  L  +MK + C  D++T++
Sbjct: 421 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS 480

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++GG C+  +I+ A  + + +    +  +  ++  ++   C  G ++ A  LL  M+  
Sbjct: 481 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 540

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T   L+   CK G   +A   L  + + G +P   ++  L++  CR  K   A
Sbjct: 541 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 600

Query: 504 FELLDELV 511
           + LL+E+V
Sbjct: 601 YRLLEEMV 608



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 221/441 (50%), Gaps = 8/441 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ + + E +G   +  +Y T++  L +  K +    V    +   C      +  L+
Sbjct: 250 AYELLDEMRE-RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    +   ++F K+   + E P +   +  ++ L + +++  AQ  L+ + +   
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCE-PDVVTFTALMDGLCKGDRLQEAQQVLE-TMEDRN 366

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN   ++ LI   CK G +  A EV K M    +  PN++TY++LI G C       A
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE-PNVVTYNSLIHGFCMTNGVDSA 425

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L EEM +    LPD +TYN LIDG C+ G+   A ++   MK   CNP+V  Y+ L+ 
Sbjct: 426 LLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK  ++  A+ +FD+M    + PD + ++TL+  +C AG VD+A  LL+EM    C  
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 544

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ T+  ++ G C+ G++ EA  +L+++   G   N  +Y  +++  C+ G+   A  LL
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLL 604

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL-VEMGFKPESDSWALLVELICR 496
             M+  G  P+  T   L+   C  G  E+A   L  L  +   K +  ++ ++++ +CR
Sbjct: 605 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCR 664

Query: 497 GRKLLFAFELLDELVIKESGT 517
             ++  A ELL+   IK+SGT
Sbjct: 665 TGRMSAALELLE--AIKQSGT 683



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 199/410 (48%), Gaps = 43/410 (10%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+  ++D L +  + +    VL  M    C  +   + +L+             E+F ++
Sbjct: 338 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 397

Query: 157 HPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
             I R  +P++   ++ ++    +N VD A   ++       L P+   +N LI   CK 
Sbjct: 398 --IVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL-PDIITYNTLIDGLCKT 454

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G    A  +  +MK ++   P++ITYS LI G CK  R   A  LF++M+ K  +LPD +
Sbjct: 455 GRAPEANRLFGDMK-AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML-KQAVLPDVV 512

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           T++ L++G+C  G VD A++++E M  + C+P+V+ YT+L++GFCK G++ EA+ V   M
Sbjct: 513 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 572

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM------------------------- 370
                +P+ + YT LI+ FCRAG+   A  LL+EM                         
Sbjct: 573 AKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDL 632

Query: 371 -----------KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
                      ++  CKAD+  + +++ GLCR G++  AL +LE +   G       Y  
Sbjct: 633 EEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVA 692

Query: 420 VLNFSCQKGELEKAIELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDA 468
           ++   CQ  EL KA+E+L  M L R   P+      ++  L + G  E+A
Sbjct: 693 LIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 40/279 (14%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   S  +    +  ++D+A+       +   L P+   F+ L++ +C  G ++ A  
Sbjct: 474 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL-PDVVTFSTLVEGYCNAGLVDDAER 532

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L+EM  S  S P++ TY++L+DG CK GR  EA  + + M +K    P+ +TY  LID 
Sbjct: 533 LLEEMVASDCS-PDVYTYTSLVDGFCKVGRMVEARRVLKRM-AKRGCQPNVVTYTALIDA 590

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKP 342
           FCR GK   A +++E M  NG  PNV  Y +L+ GFC  G L+EA+++ + + ++   K 
Sbjct: 591 FCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKA 650

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC------------ 390
           D   Y  +++  CR GR+  ALELL+ +K+ G       +  ++ GLC            
Sbjct: 651 DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 710

Query: 391 ------------------------REGKIEEALGMLEKL 405
                                   REG+ EEA  + ++L
Sbjct: 711 EEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           K++G   ++ T+N +   L R  +I+E   +L+  W  GI  N  +Y +V+   C+ G+L
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           +KA ELL  M   G +P  A  N ++  LCK   A + A AL     M  +    +W ++
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCK---ARNTAKALDYFRSMECEKNVITWTIM 132

Query: 491 VELICRGRKLLFAFELLDELVIKESGTI 518
           ++ +C+  +L  A     ++  K+ GT+
Sbjct: 133 IDGLCKANRLPEATTYFAKM--KKKGTV 158



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 9/212 (4%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC---SLHERVLEMF 153
           TY +++D   +  +      VL++M    C+ +   +  L+  F      ++  R+LE  
Sbjct: 548 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEM 607

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
                    +P++    + +     +  ++ A+  L+   +    K +   + +++   C
Sbjct: 608 VG----NGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLC 663

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           + G + +A E+L+ +K+S  + P    Y  LI GLC+     +A+E+ EEM    +  P+
Sbjct: 664 RTGRMSAALELLEAIKQSG-TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 722

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNG 304
           A  Y  +I    R G+ + A  +  E + N G
Sbjct: 723 AEAYEAVIQELAREGRHEEANALADELLGNKG 754



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 1/179 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   N  TY  ++D   R  K      +L +M     + +   + +L+  F      E
Sbjct: 574 KRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 633

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              ++  ++      K  + A    ++ L  + ++  A   L+   Q     P   I+  
Sbjct: 634 EARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS-GTPPRHDIYVA 692

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           LI+  C+   L  A EVL+EM  S+ S PN   Y  +I  L + GR  EA  L +E++ 
Sbjct: 693 LIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 751


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 250/485 (51%), Gaps = 13/485 (2%)

Query: 18  STSSSSLPWISPLEVIKANTPKA--DPPVETSDTCVDARKRSRFISHGAAISLIKCEKEP 75
           ST S   P  + + ++ +N+  +  +P  E+       +   + +     +S+I  ++  
Sbjct: 15  STQSRHRPKTTAVALLHSNSTGSPNNPLPESYTVTPPIKPWPQRLYPKRLVSMITRQQNL 74

Query: 76  QCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
             AL+IF    + Q  F+HN  TY +I+ KL+R + F  V+ +L  +     K  E IF+
Sbjct: 75  DLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFI 134

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           N+++++      +  L  F +I     ++ S+++++T LN  +++ + DL     K    
Sbjct: 135 NVIRNYGLAGKPDFALRTFIRIQDFNVQR-SVRSLNTLLNAFVQNKRYDLVHAMFKNCRS 193

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + PN    NILIK  CK+  +ESA +VL EM    M  PN++TY+T++ G    G  
Sbjct: 194 KYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGM-IPNVVTYTTILGGYSSRGDM 252

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A ++F E+  +   LPDA TY +L++G+C  G++  A K+M+ M  NG  PN   Y  
Sbjct: 253 VNANKVFGELFDRGW-LPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGV 311

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++  +CKE K  EA+ + D+M      P +     +I+  C AG+++EA EL K M ++ 
Sbjct: 312 MVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKN 371

Query: 375 CKADIVTFNIILGGLCREGKIEEA---LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           C  D    + ++  LC+EGK+ EA    G  E+    G   +  +Y  ++   C+KGEL 
Sbjct: 372 CMPDNAIMSTLIHWLCKEGKVWEARKLFGEFER----GAIPSLLTYNTLIAGMCEKGELS 427

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +A +L   M+ +G+ P+  T N L+    K G A++    L  +++    P   ++A+L+
Sbjct: 428 EAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILI 487

Query: 492 ELICR 496
           E +C+
Sbjct: 488 EELCK 492



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 147/274 (53%), Gaps = 1/274 (0%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           + +TL++   +N R+     +F+   SK  +LP+  T N+LI   C+   V+ A K+++ 
Sbjct: 167 SLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDE 226

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G  PNV  YTT++ G+   G +  A +VF E+ +    PD   YT L+N +C  GR
Sbjct: 227 MPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGR 286

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           + +A++L+ +M E G + + VT+ +++   C+E K  EA  +L+ +       + A    
Sbjct: 287 LADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCK 346

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V++  C+ G++E+A EL + ML +  +P  A  + L+  LCK G   +A   LFG  E G
Sbjct: 347 VIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEAR-KLFGEFERG 405

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P   ++  L+  +C   +L  A +L D+++ K
Sbjct: 406 AIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEK 439



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 95/200 (47%), Gaps = 10/200 (5%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P++ +   +I   C+ G +E A E+ K M K     P+    STLI  LCK G+  EA +
Sbjct: 339 PSSALCCKVIDVLCEAGKIEEACELWKRMLKKN-CMPDNAIMSTLIHWLCKEGKVWEARK 397

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF E   +   +P  LTYN LI G C  G++  A K+ + M   G  PN F Y  L+ GF
Sbjct: 398 LFGEF--ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGF 455

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA---GRVDEALELLKEMKERGCK 376
            K G  +E   + +EM +    P+   Y  LI   C+    G VD+ + +   M   G  
Sbjct: 456 SKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSM--AMASGGVD 513

Query: 377 ADI--VTFNIILGGLCREGK 394
           +D   +  N  +G L R  K
Sbjct: 514 SDSWDLFLNKAVGNLDRGSK 533



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 150/360 (41%), Gaps = 46/360 (12%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYS---NQHLRLKPNTCIFNILIKHHCKRG 216
           +R +P   A++     L+ SN      N L  S      ++  P       L+    ++ 
Sbjct: 18  SRHRPKTTAVA-----LLHSNSTGSPNNPLPESYTVTPPIKPWPQRLYPKRLVSMITRQQ 72

Query: 217 TLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
            L+ A ++ +   K Q ++  N  TY ++I  L +  R    +EL    + K QI     
Sbjct: 73  NLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSR-ARVFGPVELLLSDLHKSQI----- 126

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
                                        C  N+F    ++  +   GK   A   F  +
Sbjct: 127 ----------------------------KCGENIF--INVIRNYGLAGKPDFALRTFIRI 156

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGK 394
           ++F ++       TL+N F +  R D    + K  + + G   ++ T NI++  LC++  
Sbjct: 157 QDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKND 216

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +E A+ +L+++   G+  N  +Y  +L     +G++  A ++   +  RG+LP   T   
Sbjct: 217 VESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTI 276

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L+   C+ G   DA   +  + E G +P   ++ ++VE  C+ +K   A  LLD+++ ++
Sbjct: 277 LMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQ 336


>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
 gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
          Length = 461

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 245/459 (53%), Gaps = 9/459 (1%)

Query: 57  SRFISHGAAISLIKCEKEPQCALEIF---NTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           SR I+     SL++ +K+P+ AL++F   N  +  K F ++  +Y  I+ KL R K F  
Sbjct: 4   SRPITPFRLASLLRLQKDPKLALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFNE 63

Query: 114 VDAVLRQMTYETC-KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
           +  +L Q+  ET     E +F +++  +    L E  L++  ++ P  R + ++K+ ++ 
Sbjct: 64  MQEILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLVEL-PSFRVQRTVKSYNSL 122

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L++ +     D  +    +       K + C +N+LI+  C  G L+ A +V  EM    
Sbjct: 123 LSVFLMCKDFDKMREL--FVGIEKLGKADACTYNLLIRGFCASGRLDDASKVFDEMTNRG 180

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +S PN+IT+  LI G C + R +EA +L  +MV   ++ P+A  Y  LI G C+ G++  
Sbjct: 181 VS-PNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSL 239

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A ++ + M  N    +   Y+TL++G  K G+ +EA  V+++MK    KPDT+ Y  +IN
Sbjct: 240 AFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIIN 299

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FC+    + A  LL EM E+GCK D++++N+IL  L  EGK  EA  + E +   G   
Sbjct: 300 LFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAP 359

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  SYRI+ +  C   + ++A  +L  M+ +GF+P  A+  + + RLC+ G  ED   + 
Sbjct: 360 DVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLCE-GKNEDLLRSA 418

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           F  +E G     D W + V ++ +  KL  +F L+D L+
Sbjct: 419 FNTLEKGKLVNVDLWRMAVAMVFKDDKLSSSFNLVDSLI 457



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 176/368 (47%), Gaps = 7/368 (1%)

Query: 150 LEMFHKIHPITREKP---SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           L++F   +P T  KP   SL +    +  L  +   +  Q  L    +     P   +F 
Sbjct: 26  LQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFNEMQEILAQLKEETLFTPKEALFC 85

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I  + +    E+A ++L E+   ++    + +Y++L+        F +  ELF  +  
Sbjct: 86  DIINFYGRARLPENALKLLVELPSFRVQR-TVKSYNSLLSVFLMCKDFDKMRELFVGIEK 144

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
             +   DA TYN+LI GFC  G++D A K+ + M N G +PNV  +  L+ GFC   +L+
Sbjct: 145 LGK--ADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLK 202

Query: 327 EA-KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           EA K   D +K + + P+   Y +LI   C+ G +  A  L KEM     + D   ++ +
Sbjct: 203 EAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTL 262

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GL + G+ EEALG+ E +   G   +  +Y +++N  C+  + E A  LL  M+ +G 
Sbjct: 263 ISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGC 322

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   + N +L  L + G   +A      +   G  P+  S+ +L +  C G +   A  
Sbjct: 323 KPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAF 382

Query: 506 LLDELVIK 513
           +LDE++ K
Sbjct: 383 ILDEMIFK 390


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 234/443 (52%), Gaps = 24/443 (5%)

Query: 64  AAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR---- 119
           + +  +   K    A  +F +V E +G + +N  ++ +++       F       R    
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183

Query: 120 ---QMTYETCKFHEGIFLNLMK---HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
              Q+ + +C +   +F  LMK        + +E +L+  +         P +   +  +
Sbjct: 184 HNLQIPFHSCGY---LFDRLMKLNLTSPAWAFYEEILDCGYP--------PDVCKFNVLM 232

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
           + L + ++++ AQ       +   L+P    FN LI  +CK G L+  F + + M ++++
Sbjct: 233 HRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRV 291

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
            +P++ TYS LI+GLCK G+  +A +LF EM  +  ++P+ +T+  LI+G C  G+ D  
Sbjct: 292 -FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG-LVPNDVTFTTLINGHCVTGRADLG 349

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
            +I + M   G  P+V  Y TL+NG CK G L+EAK++  EM    LKPD   YT LI+ 
Sbjct: 350 MEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+ G ++ ALE+ KEM + G + D V F  ++ G CREG++ EA   L ++   GI  +
Sbjct: 410 CCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
            A+Y +V++  C+KG+++   +LL+ M C G +P   T N LL  LCK G  ++A + L 
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLD 529

Query: 474 GLVEMGFKPESDSWALLVELICR 496
            ++ +G  P+  ++ +L+E  C+
Sbjct: 530 AMLNLGVVPDDITYNILLEGHCK 552



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 161/275 (58%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++  ++ L+  LCK  +  EA  LF E + K  + P  +++N LI+G+C+ G +D+  +
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGE-IGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +  FM  N   P+VF Y+ L+NG CKEG+L +A ++F EM +  L P+ + +TTLIN  C
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC 341

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
             GR D  +E+ ++M  +G K D++T+N ++ GLC+ G + EA  ++ ++   G+  +K 
Sbjct: 342 VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKF 401

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y ++++  C++G+LE A+E+ + M+  G          L+   C+ G   +A   L  +
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E G KP+  ++ +++   C+   +   F+LL E+
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 151/292 (51%), Gaps = 1/292 (0%)

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           SA  V   + +++ ++ + + +S L++    +G F +AI+ F  +V K  +     +   
Sbjct: 137 SASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR-LVRKHNLQIPFHSCGY 195

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L D   +      A    E + + G  P+V  +  LM+  CKE K+ EA+ +F E+    
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L+P  + + TLIN +C++G +D+   L + M E     D+ T+++++ GLC+EG++++A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +  ++   G+  N  ++  ++N  C  G  +  +E+ + ML +G  P   T N L+  L
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           CK G   +A   +  + + G KP+  ++ +L++  C+   L  A E+  E+V
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP +   +T +N L +   +  A+  +    Q   LKP+   + +LI   CK G LESA 
Sbjct: 362 KPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDGCCKEGDLESAL 420

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+ KEM K  +   N + ++ LI G C+ G+  EA     EM+    I PD  TY ++I 
Sbjct: 421 EIRKEMVKEGIELDN-VAFTALISGFCREGQVIEAERTLREMLEAG-IKPDDATYTMVIH 478

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GFC+ G V    K+++ M+ +G  P V  Y  L+NG CK+G+++ A  + D M N  + P
Sbjct: 479 GFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP 538

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL---CRE 392
           D I Y  L+   C+ G  ++  +L     E+G   D  ++  ++G L   C+E
Sbjct: 539 DDITYNILLEGHCKHGNREDFDKL---QSEKGLVQDYGSYTSLIGDLRKTCKE 588



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 130/319 (40%), Gaps = 27/319 (8%)

Query: 198 LKPNTCIFNI-LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           L PN  I  I L  H     +L S F+ L      ++S   + +Y T+   LC +    E
Sbjct: 65  LTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLS---IHSYCTMTHFLCTHKMLSE 121

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L + +VS                   R GK   +      ++  G + +   ++ LM
Sbjct: 122 AQSLLQFVVS-------------------RKGKNSASSVFTSVLEARGTHQSNLVFSVLM 162

Query: 317 NGFCKEGKLQEAKEVFDEMK--NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           N +   G   +A + F  ++  N  +   + GY  L +   +      A    +E+ + G
Sbjct: 163 NAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY--LFDRLMKLNLTSPAWAFYEEILDCG 220

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+  FN+++  LC+E KI EA  +  ++   G+     S+  ++N  C+ G L++  
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L R M+     P   T + L+  LCK G  +DA      + + G  P   ++  L+   
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340

Query: 495 CRGRKLLFAFELLDELVIK 513
           C   +     E+  +++ K
Sbjct: 341 CVTGRADLGMEIYQQMLRK 359


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 232/430 (53%), Gaps = 7/430 (1%)

Query: 66  ISLIKCEKEPQCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM--T 122
           +S+I  ++    AL+IF    +   GF HN  TY +IL KL+R + F+ V++++  +  +
Sbjct: 51  VSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS 110

Query: 123 YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
           Y   K  E +F++L++++     +E  + +F +I P    K S+++++T LN+LI++ + 
Sbjct: 111 YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRI-PDFGVKRSVRSLNTLLNVLIQNQRF 169

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           DL     K S +   + PN    N+L+K  CK+  +ESA++VL E+    +  PNL+TY+
Sbjct: 170 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGL-VPNLVTYT 228

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           T++ G    G    A  + EEM+ +    PDA+TY VL+DG+C+ G+   A  +M+ M+ 
Sbjct: 229 TILGGYVARGDMESAKRVLEEMLDRGW-YPDAITYTVLMDGYCKLGRFSEAATVMDDMEK 287

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           N   PN   Y  ++   CKE K  EA+ +FDEM +    PD+     +I+  C   +VDE
Sbjct: 288 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDE 347

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  L ++M +  C  D    + ++  LC+EG++ EA  + ++ +  G   +  +Y  ++ 
Sbjct: 348 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIA 406

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+KGEL +A  L   M  R   P+  T N L+  L K G  ++    L  ++E G  P
Sbjct: 407 GMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFP 466

Query: 483 ESDSWALLVE 492
              ++ +L E
Sbjct: 467 NKTTFLILFE 476



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 159/318 (50%), Gaps = 2/318 (0%)

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           N +  +K    +F  L++++   G  ES+  +   +    +   ++ + +TL++ L +N 
Sbjct: 109 NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKR-SVRSLNTLLNVLIQNQ 167

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           RF     +F+       I P+  T N+L+   C+   ++ A K+++ +   G  PN+  Y
Sbjct: 168 RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTY 227

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TT++ G+   G ++ AK V +EM +    PD I YT L++ +C+ GR  EA  ++ +M++
Sbjct: 228 TTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEK 287

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              + + VT+ +++  LC+E K  EA  M +++       + +    V++  C+  ++++
Sbjct: 288 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDE 347

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  L R ML    +P  A  + L+  LCK G   +A   LF   + G  P   ++  L+ 
Sbjct: 348 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEAR-KLFDEFDKGSIPSLLTYNTLIA 406

Query: 493 LICRGRKLLFAFELLDEL 510
            +C   +L  A  L D++
Sbjct: 407 GMCEKGELTEAGRLWDDM 424



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 181/389 (46%), Gaps = 46/389 (11%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN--LMKHFSNCSLHE 147
           G   +  +  T+L+ L + ++F+ V A+ +  + E+      IF    L+K     +  E
Sbjct: 148 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN-SKESFGITPNIFTCNLLVKALCKKNDIE 206

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              ++  +I P     P+L   +T L   +    ++ A+  L+         P+   + +
Sbjct: 207 SAYKVLDEI-PAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR-GWYPDAITYTV 264

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS- 266
           L+  +CK G    A  V+ +M+K+++  PN +TY  +I  LCK  +  EA  +F+EM+  
Sbjct: 265 LMDGYCKLGRFSEAATVMDDMEKNEIE-PNEVTYGVMIRALCKEKKSGEARNMFDEMLDR 323

Query: 267 ---------------------------------KDQILPDALTYNVLIDGFCRGGKVDRA 293
                                            K+  +PD    + LI   C+ G+V  A
Sbjct: 324 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEA 383

Query: 294 KKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           +K+  EF K  G  P++  Y TL+ G C++G+L EA  ++D+M     KP+   Y  LI 
Sbjct: 384 RKLFDEFDK--GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIE 441

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              + G V E + +L+EM E GC  +  TF I+  GL + GK E+A+ ++     +G  +
Sbjct: 442 GLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNG-KV 500

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLML 441
           +K S+ + LN     GEL+K +  L+ +L
Sbjct: 501 DKESWELFLNKFV--GELDKGVLALKELL 527



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 114/241 (47%), Gaps = 7/241 (2%)

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNN----GCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           TY+ ++    R    D  + +M  ++N+     C  N+F    L+  +   G+ + +  +
Sbjct: 83  TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLF--IDLLRNYGLAGRYESSMRI 140

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCKADIVTFNIILGGLC 390
           F  + +F +K       TL+N   +  R D    + K  KE  G   +I T N+++  LC
Sbjct: 141 FLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALC 200

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           ++  IE A  +L+++   G+  N  +Y  +L     +G++E A  +L  ML RG+ P   
Sbjct: 201 KKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAI 260

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T   L+   CK G   +AA  +  + +   +P   ++ +++  +C+ +K   A  + DE+
Sbjct: 261 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 320

Query: 511 V 511
           +
Sbjct: 321 L 321


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 233/430 (54%), Gaps = 6/430 (1%)

Query: 66  ISLIKCEKEPQCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
           IS+I  ++    A +IF+   +   GF+H   TY +I+DKL+R + F+ V+++L Q++  
Sbjct: 19  ISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRN 78

Query: 125 TC--KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
           +   K  + +F+++++++         L+ F +I      +PS+K ++T LN+ +++ + 
Sbjct: 79  SSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRY 138

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
            L  + LK       + PN   FNILIK  CK+  +E+A +V  EM    M  PNL+TY+
Sbjct: 139 HLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGM-IPNLVTYT 197

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           T++ G    G    A ++F E +S    LPDA TY VL+ G+C+ G++  A K+M+ M+ 
Sbjct: 198 TILGGFVSRGDLVNAEKVFSE-ISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEY 256

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           NG  PN   Y  +++ +CKE K  EA+ + D+M +    P +     +I+  C  G+V+ 
Sbjct: 257 NGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVEN 316

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  L K M E+ C  D    + ++  LC+EGK+ EA  + ++ +  G   +  +Y  ++ 
Sbjct: 317 ACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTLIA 375

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C++GEL +A  L   M+ +   P+  T N L+    KAG+ ++    L  +++ G  P
Sbjct: 376 GMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLP 435

Query: 483 ESDSWALLVE 492
              ++ LL+E
Sbjct: 436 NKSTYTLLIE 445



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 185/383 (48%), Gaps = 6/383 (1%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KY 191
            ++++ H  N  L  ++ +   K HP      +     + ++ L  +   D  ++ L + 
Sbjct: 18  LISMITHQENLDLAFQIFDYAGKYHPGFSH--TYDTYHSIIDKLSRARAFDGVESLLSQL 75

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           S     +K    +F  +I+++   G    A +    +K+     P++   +TL++   +N
Sbjct: 76  SRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQN 135

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R+       +    K  +LP+  ++N+LI   C+   V+ A K+ + M   G  PN+  
Sbjct: 136 KRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVT 195

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YTT++ GF   G L  A++VF E+ +    PD   YT L+  +C+ GR+ +A++++  M+
Sbjct: 196 YTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNME 255

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI-VLNFSCQKGEL 430
             G + + VT+ +++   C+E K  EA  +++ +  D  +L  ++    V++  C+ G++
Sbjct: 256 YNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDM-LDKKFLPSSTLCCKVIDVLCEDGKV 314

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           E A  L + ML +  LP  A  + L+  LCK G   +A   LF   E G  P   ++  L
Sbjct: 315 ENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEAR-KLFDEFEQGTIPSLMTYNTL 373

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           +  +C   +L  A  L D++V K
Sbjct: 374 IAGMCERGELNEAGRLWDDMVEK 396



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 183/405 (45%), Gaps = 55/405 (13%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
           P+ AL+ F  + E+     +     T+L+   + K++  V + L+      CK   G+  
Sbjct: 102 PRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKN-----CKDKYGVLP 156

Query: 135 N------LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE-SNQVDLAQN 187
           N      L+K     +  E  L++F ++ P     P+L   +T L   +   + V+  + 
Sbjct: 157 NVFSFNILIKALCKKNDVENALKVFDEM-PTMGMIPNLVTYTTILGGFVSRGDLVNAEKV 215

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           F + S++     P+   + +L+  +CK+G L  A +V+  M+ + +  PN +TY  +ID 
Sbjct: 216 FSEISDKGWL--PDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVE-PNEVTYGVMIDA 272

Query: 248 LCKNGRFREAIELFEEMVSKDQI----------------------------------LPD 273
            CK  +  EA  L ++M+ K  +                                  LPD
Sbjct: 273 YCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPD 332

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
               + LI   C+ GKV  A+K+ +  +  G  P++  Y TL+ G C+ G+L EA  ++D
Sbjct: 333 NAIMSTLIHWLCKEGKVWEARKLFDEFEQ-GTIPSLMTYNTLIAGMCERGELNEAGRLWD 391

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR-- 391
           +M     +P+   Y  LI  F +AG V E + +L+EM + GC  +  T+ +++ GL    
Sbjct: 392 DMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESG 451

Query: 392 -EGKIEEALGM-LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            EG +++ + M +     D    +   ++IV N  C  G L++ +
Sbjct: 452 MEGDVDKVMSMAMASREVDADSWDLFLHKIVGNLDCGTGALDRLL 496



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 142/268 (52%), Gaps = 4/268 (1%)

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVF 310
           GR R A++ F  +  +  + P     N L++ F +  +       ++  K+  G  PNVF
Sbjct: 100 GRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVF 159

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           ++  L+   CK+  ++ A +VFDEM    + P+ + YTT++  F   G +  A ++  E+
Sbjct: 160 SFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEI 219

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            ++G   D  T+ +++ G C++G++ +A+ +++ + Y+G+  N+ +Y ++++  C++ + 
Sbjct: 220 SDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKS 279

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            +A  L+  ML + FLP      +++  LC+ G  E+A      ++E    P++   + L
Sbjct: 280 GEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTL 339

Query: 491 VELICRGRKLLFAFELLDELVIKESGTI 518
           +  +C+  K+  A +L DE    E GTI
Sbjct: 340 IHWLCKEGKVWEARKLFDEF---EQGTI 364


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 223/463 (48%), Gaps = 48/463 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + +G N     +  ++  L R  +      V RQM       H   FL   K     S  
Sbjct: 107 KSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN----DAHPPDFLTYTKLVHGLSKA 162

Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            R+ +    +  +   R  P    ++  +  L   ++VD A+  ++    H  +  N   
Sbjct: 163 GRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE-EMLHRGMAANAIT 221

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ L+   CK   L+ A  +L      +   P+++TYST+IDGLCK GR R+A+++FEEM
Sbjct: 222 YSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 281

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
                  P A+TYN LI G+CR G +D A +++  M ++ C P+V  YTTLM+ FCK G+
Sbjct: 282 ----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI----- 379
           L +A E+F +M    L PD + +T+L++  C  GR+++ALELL+E+  RGC   I     
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 397

Query: 380 ------------------------------VTFNIILGGLCREGKIEEALGMLEKLWYDG 409
                                         VT+NI++ G CR G+ ++AL  L++L  +G
Sbjct: 398 VVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457

Query: 410 --IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
                + A Y I+L+  C+ G  + A++    M+ RG++P  AT   ++  LCKA   + 
Sbjct: 458 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 517

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           A   L  +++ G  P   +   +V   CR   +  A EL  EL
Sbjct: 518 AHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 161/315 (51%), Gaps = 8/315 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+    N ++   C      +A  +  +M  +++   N  TY  LI  LCK     EA
Sbjct: 42  LSPDPVELNTILAELCDARDTTTAMALFDKM--AELGAVNHTTYYNLIHPLCKARLLDEA 99

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L  +M S+  + P  L +NV+I G CR G++  A  +   M N+   P+   YT L++
Sbjct: 100 MGLLLDMKSR-GMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVH 157

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  K G+L++A +V  EM +    PD    T ++   C   RVD+A EL++EM  RG  A
Sbjct: 158 GLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAA 217

Query: 378 DIVTFNIILGGLCREGKIEEALG-MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           + +T++ ++ GLC+  +++EA+  +L ++   G   +  +Y  V++  C+ G L  A+++
Sbjct: 218 NAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI 277

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M C    P   T N L+   C+AG  ++A   L  +V+    P+  ++  L+   C+
Sbjct: 278 FEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCK 334

Query: 497 GRKLLFAFELLDELV 511
             +L  A+EL  ++V
Sbjct: 335 MGRLDDAYELFQQMV 349



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 183/361 (50%), Gaps = 16/361 (4%)

Query: 60  ISHGAAI-SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAV 117
           I++ A +  L KCE+  +    +   V+ ++GF  +  TY+T++D L +  +  +AVD +
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVT-RRGFTPDIVTYSTVIDGLCKAGRLRDAVD-I 277

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
             +M+   C      + +L+  +      +  + +  K+       P +   +T ++   
Sbjct: 278 FEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD-DNCAPDVITYTTLMSAFC 333

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +  ++D A    +    + +L P+   F  L+   C  G +E A E+L+E+ +     P 
Sbjct: 334 KMGRLDDAYELFQQMVAN-KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP-PT 391

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + TY+ ++DG CK+ + R+A EL  +  S+   +P+ +TYN+L+ G CR G+ D+A + +
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSR-GFVPNTVTYNILVAGCCRAGRTDQALQYL 450

Query: 298 EFMKNNG--CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + + G  C  +V  Y  +++  C++G+  +A + ++EM      P    + T++   C
Sbjct: 451 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC 510

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +A +  +A ELL+EM + G      T + ++   CR G I++A  +  +L    +Y +K+
Sbjct: 511 KAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR---LYTDKS 567

Query: 416 S 416
           S
Sbjct: 568 S 568



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 116/236 (49%), Gaps = 3/236 (1%)

Query: 273 DALTYNVLIDGFCRGGKVDR-AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           D+ T+ V++ G     K+      +++ +++ G +P+     T++   C       A  +
Sbjct: 9   DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMAL 68

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD+M        T  Y  LI+  C+A  +DEA+ LL +MK RG     +  N+++GGLCR
Sbjct: 69  FDKMAELGAVNHTT-YYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCR 127

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G++  ALG+  ++  D    +  +Y  +++   + G L  A+++L+ M+    +P   T
Sbjct: 128 AGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTT 186

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              ++  LC     +DA   +  ++  G    + +++ LV+ +C+  +L  A  LL
Sbjct: 187 LTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL 242


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 200/346 (57%), Gaps = 3/346 (0%)

Query: 171  TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
            TC  LL    ++   ++ L+     L   PN   F ILI   C+ G + +A+E+LKEM +
Sbjct: 846  TCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPR 905

Query: 231  SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
              +   N+I ++ +I GLC   +   A+ELF+EM       PD  TY+ ++D   + GKV
Sbjct: 906  HGVP-QNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 964

Query: 291  DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
            D A +++E M + GC+PNV  Y++L++G CK GKL EA  +   M      P+ + Y T+
Sbjct: 965  DDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 1024

Query: 351  INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            I+  C+ GR+DEA  LL+EM + GC+ ++VT+ ++L   C+ GK E+A+G++E +   G 
Sbjct: 1025 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 1084

Query: 411  YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
              N  +Y  +L+  C+K E+E+A +LL  M+ +G +P+  + N ++  LCKA    +  +
Sbjct: 1085 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 1144

Query: 471  ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
             L  ++     P+  ++  +++ +C+  ++  A+EL +  +I+ESG
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN--LIQESG 1188



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 222/439 (50%), Gaps = 42/439 (9%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            AL  F+  + Q+G+NH+  T   +L  L R K+ +    V R    + C           
Sbjct: 827  ALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN---KLC----------- 872

Query: 138  KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 CS                   P++   +  ++ L  +  +  A   LK   +H  
Sbjct: 873  -----CS-------------------PNMFTFTILIHGLCRAGDIGTAYELLKEMPRH-G 907

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +  N  + N++IK  C    L+SA E+ KEM++S    P++ TYST++D L K+G+  +A
Sbjct: 908  VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 967

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              L E+MVSK    P+ +TY+ L+ G C+ GK+D A  +++ M  +GC+PN+  Y T+++
Sbjct: 968  CRLVEDMVSKG-CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 1026

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            G CK G++ EA  + +EM +   +P+ + YT L++ FC+ G+ ++A+ L++ M E+G   
Sbjct: 1027 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 1086

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            ++ T+N +L   C++ ++E A  +L  +   G   N  SY  V+   C+  ++ + + LL
Sbjct: 1087 NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 1146

Query: 438  RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV-EMGFKPESDSWALLVELICR 496
              ML    +P   T N ++  +CK     D A  LF L+ E G  P   ++  LV  +C+
Sbjct: 1147 EQMLSNNCVPDIVTFNTIIDAMCKTYRV-DIAYELFNLIQESGCTPNLVTYNSLVHGLCK 1205

Query: 497  GRKLLFAFELLDELVIKES 515
             R+   A  LL E+  K+ 
Sbjct: 1206 SRRFDQAEYLLREMTRKQG 1224



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 224/457 (49%), Gaps = 40/457 (8%)

Query: 60   ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
            I H   I  +   ++   ALE+F  + E      +  TY+TI+D L +  K +    ++ 
Sbjct: 913  ILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 972

Query: 120  QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
             M  + C                                     P++   S+ L+ L ++
Sbjct: 973  DMVSKGCS------------------------------------PNVVTYSSLLHGLCKA 996

Query: 180  NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
             ++D A   L+   +     PN   +N +I  HCK G ++ A+ +L+EM       PN++
Sbjct: 997  GKLDEATALLQRMTRS-GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ-PNVV 1054

Query: 240  TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            TY+ L+D  CK G+  +AI L E MV K  + P+  TYN L+D FC+  +V+RA +++  
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV-PNLFTYNSLLDMFCKKDEVERACQLLSS 1113

Query: 300  MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
            M   GC PNV +Y T++ G CK  K+ E   + ++M +    PD + + T+I+  C+  R
Sbjct: 1114 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173

Query: 360  VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY-DGIYLNKASYR 418
            VD A EL   ++E GC  ++VT+N ++ GLC+  + ++A  +L ++    G   +  +Y 
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233

Query: 419  IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
             V++  C+   +++A +L   ML  G  P   T + ++  LCK    ++A   L  +++ 
Sbjct: 1234 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 1293

Query: 479  GFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
            GF P + ++  L++  C+   L  A E+L  L+ K S
Sbjct: 1294 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 1330



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 178/314 (56%), Gaps = 3/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LK +  +   +++  C  G    A    +EM K+    P+ +TY+T+I+GL K+ R  +A
Sbjct: 192 LKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDSVTYNTMINGLSKSDRLDDA 249

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           I L EEMV  +   P+  +YN ++ GFC+  +V+ A  ++E M   GC P+V +YTT++N
Sbjct: 250 IRLLEEMVD-NGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK  ++ EA  V D+M     +P+ I Y TL++ FCR G +D A+EL+++M ERG + 
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + +T+N I+   CR   +E A  +L+ +   G   +  +Y  +++  C+ G+L +A +LL
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ RG  P  A  + L+  LCKA   + A   L   + M   P+  ++++L+  +C+ 
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKA 488

Query: 498 RKLLFAFELLDELV 511
           ++L  A   LD +V
Sbjct: 489 KRLPEAESWLDVMV 502



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 237/453 (52%), Gaps = 13/453 (2%)

Query: 67   SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
            SL+K  K       + + VS  KG + N  TY+++L  L +  K +   A+L++MT   C
Sbjct: 957  SLVKSGKVDDACRLVEDMVS--KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014

Query: 127  KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDL 184
              +   +  ++    +C L  R+ E +H +  +     +P++   +  L+   +  + + 
Sbjct: 1015 SPNIVTYNTIID--GHCKLG-RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 1071

Query: 185  AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
            A   ++   +   + PN   +N L+   CK+  +E A ++L  M + +   PN+++Y+T+
Sbjct: 1072 AIGLVEVMVEKGYV-PNLFTYNSLLDMFCKKDEVERACQLLSSMIQ-KGCVPNVVSYNTV 1129

Query: 245  IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
            I GLCK  +  E + L E+M+S + + PD +T+N +ID  C+  +VD A ++   ++ +G
Sbjct: 1130 IAGLCKATKVHEGVLLLEQMLSNNCV-PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 1188

Query: 305  CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEA 363
            C PN+  Y +L++G CK  +  +A+ +  EM +     PD I Y T+I+  C++ RVD A
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248

Query: 364  LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             +L  +M   G   D VT++I++  LC+   ++EA  +LE +  +G      +Y  +++ 
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 1308

Query: 424  SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             C+ G L+KA+E+L+L+L +G  P   T +  +  L K G    A   L  ++  G  P+
Sbjct: 1309 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 1368

Query: 484  SDSWALLVELICRGRKLLFAFELLDELVIKESG 516
            + ++  L++  C       A +L +  V+++ G
Sbjct: 1369 TVTYNTLLKGFCDASLTEDAVDLFE--VMRQCG 1399



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 189/335 (56%), Gaps = 4/335 (1%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           LN+L++++Q   A +  + S    +   +T  ++ LI    + G +  A+E+  EM +  
Sbjct: 133 LNVLVKAHQYSQAHDLFR-SRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKG 191

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +   +   + +++ GLC  G+  +A+  F EM       PD++TYN +I+G  +  ++D 
Sbjct: 192 LK-AHAGVHKSILRGLCDAGQCSDAVLHFREM--SKTCPPDSVTYNTMINGLSKSDRLDD 248

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A +++E M +NG  PNVF+Y T+++GFCK  +++ A  + ++M      PD + YTT+IN
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+  +VDEA  ++ +M +RGC+ +++T+  ++ G CR G ++ A+ ++ K+   G   
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N  +Y  +++  C++ ++E+A ++L++M+  G  P     + ++   CKAG   +A   L
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             ++  G +P+    + L++ +C+   +  A ELL
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 210/408 (51%), Gaps = 11/408 (2%)

Query: 88   QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            + G + N  TY TI+D   +  + +    +L +M    C+ +   +  L+  F  C   E
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 1070

Query: 148  RVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
              + +      +  EK   P+L   ++ L++  + ++V+ A   L    Q     PN   
Sbjct: 1071 DAIGLVE----VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVS 1125

Query: 205  FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
            +N +I   CK   +     +L++M  S    P+++T++T+ID +CK  R   A ELF  +
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQML-SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN-L 1183

Query: 265  VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEG 323
            + +    P+ +TYN L+ G C+  + D+A+ ++ E  +  GC+P++  Y T+++G CK  
Sbjct: 1184 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243

Query: 324  KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++  A ++F +M +  L PD + Y+ +I+  C+   +DEA  +L+ M + G     +T+ 
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 1303

Query: 384  IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
             ++ G C+ G +++AL +L+ L   G Y +  ++ I +++  ++G L +A ELL  ML  
Sbjct: 1304 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 1363

Query: 444  GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            G +P   T N LL   C A + EDA      + + G +P++ ++  LV
Sbjct: 1364 GLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 213/441 (48%), Gaps = 13/441 (2%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P  AL  F     + G+ H       +L+ L +  ++     + R             +
Sbjct: 105 DPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTY 164

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS----TCLNLLIESNQVDLAQNFL 189
             L+  F          E+F +++     +  LKA +    + L  L ++ Q   A   L
Sbjct: 165 STLISGFIRAGKILPAYELFDEMN-----RKGLKAHAGVHKSILRGLCDAGQCSDA--VL 217

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
            +        P++  +N +I    K   L+ A  +L+EM  +  + PN+ +Y+T++ G C
Sbjct: 218 HFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA-PNVFSYNTVLHGFC 276

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K  R   A+ L E+MV++    PD ++Y  +I+G C+  +VD A ++M+ M   GC PNV
Sbjct: 277 KANRVENALWLLEQMVTRG-CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNV 335

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y TL++GFC+ G L  A E+  +M     +P+ I Y  +++ FCR   ++ A ++L+ 
Sbjct: 336 ITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQM 395

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M + GC  D + ++ I+ G C+ GK+ EA  +LE++   G   + A    +++  C+   
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAA 455

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           ++ A ELLR+ +     P     + L+  LCKA    +A   L  +V+    P+  ++  
Sbjct: 456 IDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNS 515

Query: 490 LVELICRGRKLLFAFELLDEL 510
           +V+ +C+ R++  AF L D +
Sbjct: 516 VVDGLCKSRRINDAFLLFDRM 536



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 217/462 (46%), Gaps = 39/462 (8%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  N  +Y T+L    +  + E    +L QM    C      +  ++         +  
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319

Query: 150 LEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
             +  K+  I R  +P++    T ++       +D A   ++   +    +PN   +N +
Sbjct: 320 CRVMDKM--IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER-GYRPNAITYNNI 376

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV--- 265
           +   C+R  +E A +VL+ M ++    P+ I YST+I G CK G+ REA +L E+M+   
Sbjct: 377 MHVFCRRNDMERAHQVLQMMIQTGCP-PDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435

Query: 266 ----------------------SKDQIL---------PDALTYNVLIDGFCRGGKVDRAK 294
                                 S  ++L         PD + Y++LI   C+  ++  A+
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAE 495

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
             ++ M  N C P+V  Y ++++G CK  ++ +A  +FD M+   + PD + Y+ +I+ F
Sbjct: 496 SWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF 555

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+   +D A ++L+ MKE  C  D+VT++ ++ GLC+ G +++A  + +++   G   N 
Sbjct: 556 CKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNL 615

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +++  C+  ++E+A E+L +M  +   P   T   L+  LC A   E+A   L  
Sbjct: 616 VTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLRE 675

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           + + G  P+  ++  L+  + +   L    +LL E+   E G
Sbjct: 676 MKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEG 717



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 204/436 (46%), Gaps = 37/436 (8%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTY-ETCKFHEGIFLNL 136
            A E+FN + E  G   N  TY +++  L + ++F+  + +LR+MT  + C      +  +
Sbjct: 1177 AYELFNLIQES-GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235

Query: 137  MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
            +         +R  ++F ++       P     S  ++ L +   +D A N L+   ++ 
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLS-DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN- 1293

Query: 197  RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
               P    +  LI   CK G L+ A E+L ++  S+ SYP+++T+S  ID L K GR R+
Sbjct: 1294 GFDPGAITYGTLIDGFCKTGNLDKALEIL-QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQ 1352

Query: 257  AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
            A EL E M+ +  ++PD +TYN L+ GFC     + A  + E M+  GC P+   YTTL+
Sbjct: 1353 AGELLETML-RAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411

Query: 317  NGFCKEGKLQE-----AKEVFD-------EMKNFL-----LKPDTIGYTTLINCFCRAGR 359
                 +   ++     +K + D       E+ + L     ++ D      +++ F + G 
Sbjct: 1412 GHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGS 1471

Query: 360  VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
              +A ++ + M +R    ++V ++ +LG      + E+A G+   +  +G+  +  ++  
Sbjct: 1472 PQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLS 1527

Query: 420  VLNFSCQKGELEKAI-ELLRLMLCRGFLP---HYATSNELLVRLCKAGMAEDAAIALFGL 475
            +L   C  G L+ A+ E + +    G  P   H++   +LL RL     AED  +     
Sbjct: 1528 LLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLG---- 1583

Query: 476  VEMGFKPESDSWALLV 491
              M  KP + +W  L+
Sbjct: 1584 --MPCKPSAATWNCLL 1597



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 1/164 (0%)

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           L+N   +A +  +A +L +   E     D VT++ ++ G  R GKI  A  + +++   G
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKG 191

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  +   ++ +L   C  G+   A+   R M  +   P   T N ++  L K+   +DA 
Sbjct: 192 LKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAI 250

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             L  +V+ GF P   S+  ++   C+  ++  A  LL+++V +
Sbjct: 251 RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR 294



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 26/260 (10%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA-VLRQMTYETCKFHEGIFLNL 136
            A+++F  V  Q G   +NATY T++  L   K ++ + A V + M     K +  +   L
Sbjct: 1388 AVDLFE-VMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKL 1446

Query: 137  MKHF---SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
                   ++  L   +++MF K       +   + +    N+++ S  + +   F K   
Sbjct: 1447 EASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQ-RNVVLWSAMLGVYV-FHKQEE 1504

Query: 194  QHLRL---------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
            Q   L         +P+   F  L+   C  G L++A +    + +     P +  +S +
Sbjct: 1505 QAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCV 1564

Query: 245  IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
            ID L + G   EA +L   M  K    P A T+N L+  +   G  +RA ++ E      
Sbjct: 1565 IDLLGRLGLVNEAEDLMLGMPCK----PSAATWNCLLSAYKICGDFERALRVAEL----- 1615

Query: 305  CNPNVFNYTTLMNGFCKEGK 324
             NP   +Y  L N + +  K
Sbjct: 1616 -NPTQASYLLLSNMYAQYDK 1634


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 227/421 (53%), Gaps = 11/421 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+  ++  L    + ++  +VLR MT   C  +  I+  L+   S C+     L++  ++
Sbjct: 213 TFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 272

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCK 214
             +    P  +  +  +  L + ++++ A    K  N+ L     P+   +  L+   CK
Sbjct: 273 F-LMGCVPDAETFNDVILGLCKFDRINEAA---KMVNRMLIRGFTPDDITYGYLMNGLCK 328

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
            G +++A ++   + K     P  + ++TLI G   +GR  +A  +  +MV+   I+PD 
Sbjct: 329 IGRVDAAKDLFYRIPK-----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 383

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            TYN LI G+ + G V  A +++  M+N GC PNV++YT L++GFCK GK+ EA  + +E
Sbjct: 384 CTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNE 443

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M    LKP+T+G+  LI+ FC+  R+ EA+E+ +EM  +GCK D+ TFN ++ GLC   +
Sbjct: 444 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 503

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           I+ AL +L  +  +G+  N  +Y  ++N   ++GE+++A +L+  M+ +G L    T N 
Sbjct: 504 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNS 563

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L+  LC+AG  + A      ++  G  P S S  +L+  +CR   +  A E   E+V++ 
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623

Query: 515 S 515
           S
Sbjct: 624 S 624



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 237/480 (49%), Gaps = 35/480 (7%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           L++   +   ++E+F+    QKG+ H+   Y  ++ KL    +F+ +D +L QM  E   
Sbjct: 78  LLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIV 137

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
           F E +F+++M+ +       +   +  ++  +   +P+ K+ +  L +L+  N   +A N
Sbjct: 138 FKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAAN 197

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
              Y     ++ P    F +++K  C    ++SA  VL++M K     PN + Y TLI  
Sbjct: 198 VF-YDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTK-HGCVPNSVIYQTLIHS 255

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L K  R  EA++L EEM     + PDA T+N +I G C+  +++ A K++  M   G  P
Sbjct: 256 LSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTP 314

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVF--------------------------------DEM 335
           +   Y  LMNG CK G++  AK++F                                D +
Sbjct: 315 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMV 374

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
            ++ + PD   Y +LI  + + G V  ALE+L++M+ +GCK ++ ++ I++ G C+ GKI
Sbjct: 375 TSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKI 434

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA  +L ++  DG+  N   +  +++  C++  + +A+E+ R M  +G  P   T N L
Sbjct: 435 DEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 494

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           +  LC+    + A   L  ++  G    + ++  L+    R  ++  A +L++E+V + S
Sbjct: 495 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 554



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 200/359 (55%), Gaps = 7/359 (1%)

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
           ++F++I      KP+    +T ++  +   ++D A+  L        + P+ C +N LI 
Sbjct: 337 DLFYRI-----PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 391

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            + K+G +  A EVL++M+ ++   PN+ +Y+ L+DG CK G+  EA  L  EM S D +
Sbjct: 392 GYWKKGLVGLALEVLRDMR-NKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM-SADGL 449

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            P+ + +N LI  FC+  ++  A +I   M   GC P+V+ + +L++G C+  +++ A  
Sbjct: 450 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 509

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  +M +  +  +T+ Y TLIN F R G + EA +L+ EM  +G   D +T+N ++ GLC
Sbjct: 510 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLC 569

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           R G++++A  + EK+  DG+  +  S  I++N  C+ G +E+A+E  + M+ RG  P   
Sbjct: 570 RAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 629

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
           T N L+  LC+AG  ED       L   G  P++ ++  L+  +C+G  +  A  LLDE
Sbjct: 630 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDE 688



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 202/409 (49%), Gaps = 17/409 (4%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  ++ TY  +++ L +  + +A     + + Y   K    IF  L+  F     H R
Sbjct: 310 RGFTPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPTSVIFNTLIHGFVT---HGR 362

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLI---ESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           + +    +  +      +  + T  +L+    +   V LA   L+   ++   KPN   +
Sbjct: 363 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLR-DMRNKGCKPNVYSY 421

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
            IL+   CK G ++ A+ +L EM    +  PN + ++ LI   CK  R  EA+E+F EM 
Sbjct: 422 TILVDGFCKLGKIDEAYNLLNEMSADGLK-PNTVGFNCLISAFCKEHRIPEAVEIFREMP 480

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K    PD  T+N LI G C   ++  A  ++  M + G   N   Y TL+N F + G++
Sbjct: 481 RKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 539

Query: 326 QEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +EA+++ +EM  +  LL  D I Y +LI   CRAG VD+A  L ++M   G     ++ N
Sbjct: 540 KEARKLVNEMVFQGSLL--DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++ GLCR G +EEA+   +++   G   +  ++  ++N  C+ G +E  + + R +   
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 657

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           G  P   T N L+  LCK G   DA + L   +E GF P   +W++L++
Sbjct: 658 GIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQ 706



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 169/297 (56%), Gaps = 3/297 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP++ + +  ++   +  ++D A N L   +    LKPNT  FN LI   CK   +  A 
Sbjct: 415 KPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAV 473

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+ +EM +     P++ T+++LI GLC+    + A+ L  +M+S + ++ + +TYN LI+
Sbjct: 474 EIFREMPRKGCK-PDVYTFNSLISGLCEVDEIKHALWLLRDMIS-EGVVANTVTYNTLIN 531

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            F R G++  A+K++  M   G   +   Y +L+ G C+ G++ +A+ +F++M    L P
Sbjct: 532 AFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVP 591

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
            +I    LIN  CR+G V+EA+E  KEM  RG   DIVTFN ++ GLCR G+IE+ L M 
Sbjct: 592 SSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 651

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            KL  +GI  +  +Y  ++++ C+ G +  A  LL   +  GF+P+  T + LL  L
Sbjct: 652 RKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 123/253 (48%), Gaps = 13/253 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+EIF  +  +KG   +  T+ +++  L    + +    +LR M  E    +   +  L+
Sbjct: 472 AVEIFREMP-RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 530

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQH 195
             F        + E    ++ +  +   L  I+  + +  L  + +VD A++  +   + 
Sbjct: 531 NAFLR---RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE---KM 584

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           LR  L P++   NILI   C+ G +E A E  KEM   + S P+++T+++LI+GLC+ GR
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVTFNSLINGLCRAGR 643

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             + + +F ++   + I PD +TYN L+   C+GG V  A  +++    +G  PN   ++
Sbjct: 644 IEDGLTMFRKL-QAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWS 702

Query: 314 TLMNGFCKEGKLQ 326
            L+     +  L 
Sbjct: 703 ILLQSLVPQETLD 715


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 229/436 (52%), Gaps = 18/436 (4%)

Query: 64  AAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR---- 119
           + +  +   K    A  +F +V E +G + +N  ++ +++       F       R    
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183

Query: 120 ---QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
              Q+ + +C +     + L       + +E +L+  +         P +   +  ++ L
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYP--------PDVCKFNVLMHRL 235

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
            + ++++ AQ       +   L+P    FN LI  +CK G L+  F + + M ++++ +P
Sbjct: 236 CKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRV-FP 293

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           ++ TYS LI+GLCK G+  +A +LF EM  +  ++P+ +T+  LI+G C  G+ D   +I
Sbjct: 294 DVFTYSVLINGLCKEGQLDDANKLFLEMCDRG-LVPNDVTFTTLINGHCVTGRADLGMEI 352

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            + M   G  P+V  Y TL+NG CK G L+EAK++  EM    LKPD   YT LI+  C+
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G ++ ALE+ KEM + G + D V F  ++ G CREG++ EA   L ++   GI  + A+
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +V++  C+KG+++   +LL+ M C G +P   T N LL  LCK G  ++A + L  ++
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532

Query: 477 EMGFKPESDSWALLVE 492
            +G  P+  ++ +L+E
Sbjct: 533 NLGVVPDDITYNILLE 548



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 161/275 (58%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++  ++ L+  LCK  +  EA  LF E + K  + P  +++N LI+G+C+ G +D+  +
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGE-IGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +  FM  N   P+VF Y+ L+NG CKEG+L +A ++F EM +  L P+ + +TTLIN  C
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC 341

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
             GR D  +E+ ++M  +G K D++T+N ++ GLC+ G + EA  ++ ++   G+  +K 
Sbjct: 342 VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKF 401

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y ++++  C++G+LE A+E+ + M+  G          L+   C+ G   +A   L  +
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E G KP+  ++ +++   C+   +   F+LL E+
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 155/304 (50%), Gaps = 1/304 (0%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L++    R    SA  V   + +++ ++ + + +S L++    +G F +AI+ F  +V K
Sbjct: 125 LLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR-LVRK 183

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             +     +   L D   +      A    E + + G  P+V  +  LM+  CKE K+ E
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINE 243

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+ +F E+    L+P  + + TLIN +C++G +D+   L + M E     D+ T+++++ 
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+EG++++A  +  ++   G+  N  ++  ++N  C  G  +  +E+ + ML +G  P
Sbjct: 304 GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP 363

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N L+  LCK G   +A   +  + + G KP+  ++ +L++  C+   L  A E+ 
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423

Query: 508 DELV 511
            E+V
Sbjct: 424 KEMV 427



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 130/319 (40%), Gaps = 27/319 (8%)

Query: 198 LKPNTCIFNI-LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           L PN  I  I L  H     +L S F+ L      ++S   + +Y T+   LC +    E
Sbjct: 65  LTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLS---IHSYCTMTHFLCTHKMLSE 121

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L + +VS                   R GK   +      ++  G + +   ++ LM
Sbjct: 122 AQSLLQFVVS-------------------RKGKNSASSVFTSVLEARGTHQSNLVFSVLM 162

Query: 317 NGFCKEGKLQEAKEVFDEMK--NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           N +   G   +A + F  ++  N  +   + GY  L +   +      A    +E+ + G
Sbjct: 163 NAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY--LFDRLMKLNLTSPAWAFYEEILDCG 220

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+  FN+++  LC+E KI EA  +  ++   G+     S+  ++N  C+ G L++  
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L R M+     P   T + L+  LCK G  +DA      + + G  P   ++  L+   
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340

Query: 495 CRGRKLLFAFELLDELVIK 513
           C   +     E+  +++ K
Sbjct: 341 CVTGRADLGMEIYQQMLRK 359


>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 247/457 (54%), Gaps = 10/457 (2%)

Query: 67  SLIKCEKEPQCALEIF-NTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           SL++ + +P+ AL++F N   + K F + + +Y  I+ KL R + F  ++ +L Q+  ET
Sbjct: 14  SLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEMEQILSQLRRET 73

Query: 126 CKFH--EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
            +F   E IF N++  +    L +R ++ F  I P  R + ++K++++ LN L++  + +
Sbjct: 74  -RFSPKEIIFCNVISFYGRARLPDRAIQTFESI-PEFRCQRTVKSLNSLLNALLKCKEFE 131

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
                L   ++     P+ C +N+LI   C  G+L  A+ V  EM +  +  PN++T+ T
Sbjct: 132 KFDGILSGIDKFA--TPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVC-PNVVTFGT 188

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI GLC + R  EA  L E+MV    + P+A  Y  L+ G CR  ++  A ++ + M  N
Sbjct: 189 LISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN 248

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
               +   Y+TL+    K G+  E   V +EM+    KPDT+ Y  +I+ FC     + A
Sbjct: 249 KLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAA 308

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             +L+EM  +GCK D++++N+I+ GLC+EGK  EA  + E +   G   +  SYRI+ + 
Sbjct: 309 YGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDG 368

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+  +  +A  +L  M+ +G+ P  A+  + +  LC+ G  E     L  LV+ G   +
Sbjct: 369 LCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLVK-GNVID 427

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
            D+W+L V  +C+  KL    EL+D + +K++ T+ +
Sbjct: 428 GDAWSLAVSKVCKKEKLSNGSELVD-IFLKDTETVPI 463


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 231/430 (53%), Gaps = 7/430 (1%)

Query: 66  ISLIKCEKEPQCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM--T 122
           +S+I  ++    AL+IF    +   GF HN  TY +IL KL+R + F+ V++++  +  +
Sbjct: 53  VSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS 112

Query: 123 YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
           Y   K  E +F++L++++     +E  + +F +I P    K S+++++T LN+LI++ + 
Sbjct: 113 YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRI-PDFGVKRSVRSLNTLLNVLIQNQRF 171

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           DL     K S +   + PN    N+L+K  CK+  +ESA++VL E+  S    PNL+TY+
Sbjct: 172 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI-PSMGLVPNLVTYT 230

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           T++ G    G    A  + EEM+ +    PDA TY VL+DG+C+ G+   A  +M+ M+ 
Sbjct: 231 TILGGYVARGDMESAKRVLEEMLDRGW-YPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           N   PN   Y  ++   CKE K  EA+ +FDEM      PD+     +I+  C   +VDE
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  L ++M +  C  D    + ++  LC+EG++ EA  + ++ +  G   +  +Y  ++ 
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIA 408

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+KGEL +A  L   M  R   P+  T N L+  L K G  ++    L  ++E+G  P
Sbjct: 409 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468

Query: 483 ESDSWALLVE 492
              ++ +L E
Sbjct: 469 NKTTFLILFE 478



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 159/318 (50%), Gaps = 2/318 (0%)

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           N +  +K    +F  L++++   G  ES+  +   +    +   ++ + +TL++ L +N 
Sbjct: 111 NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKR-SVRSLNTLLNVLIQNQ 169

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           RF     +F+       I P+  T N+L+   C+   ++ A K+++ + + G  PN+  Y
Sbjct: 170 RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTY 229

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TT++ G+   G ++ AK V +EM +    PD   YT L++ +C+ GR  EA  ++ +M++
Sbjct: 230 TTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              + + VT+ +++  LC+E K  EA  M +++       + +    V++  C+  ++++
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  L R ML    +P  A  + L+  LCK G   +A   LF   E G  P   ++  L+ 
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR-KLFDEFEKGSIPSLLTYNTLIA 408

Query: 493 LICRGRKLLFAFELLDEL 510
            +C   +L  A  L D++
Sbjct: 409 GMCEKGELTEAGRLWDDM 426



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 48/390 (12%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL--NLMKHFSNCSLHE 147
           G   +  +  T+L+ L + ++F+ V A+ +  + E+      IF    L+K     +  E
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN-SKESFGITPNIFTCNLLVKALCKKNDIE 208

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              ++  +I P     P+L   +T L   +    ++ A+  L+         P+   + +
Sbjct: 209 SAYKVLDEI-PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR-GWYPDATTYTV 266

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS- 266
           L+  +CK G    A  V+ +M+K+++  PN +TY  +I  LCK  +  EA  +F+EM+  
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIE-PNEVTYGVMIRALCKEKKSGEARNMFDEMLER 325

Query: 267 ---------------------------------KDQILPDALTYNVLIDGFCRGGKVDRA 293
                                            K+  +PD    + LI   C+ G+V  A
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385

Query: 294 KKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           +K+  EF K  G  P++  Y TL+ G C++G+L EA  ++D+M     KP+   Y  LI 
Sbjct: 386 RKLFDEFEK--GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIE 443

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              + G V E + +L+EM E GC  +  TF I+  GL + GK E+A+ ++     +G  +
Sbjct: 444 GLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KV 502

Query: 413 NKASYRIVL-NFSCQKGELEKAIELLRLML 441
           +K S+ + L  F+   GEL+K +  L+ +L
Sbjct: 503 DKESWELFLKKFA---GELDKGVLPLKELL 529


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 263/553 (47%), Gaps = 64/553 (11%)

Query: 6   FSLRKCCRFSSFSTS--------SSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRS 57
            +   C +F  FS S        S SL    P   I   +P +     T    +D+    
Sbjct: 1   MAFSSCLKFYPFSISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDS---- 56

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAV 117
                      ++ + +   AL +FN  S++  F+   A Y  IL +L R   F+ +  +
Sbjct: 57  -----------LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKI 105

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
           L  M    C+     FL L++ ++   L + +L +   +      KP     +  LNLL+
Sbjct: 106 LEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV 165

Query: 178 ESNQVDLAQNFLKYSNQHL-RLKPNTCIFNILIKHHCK---------------------- 214
           + N + L +  + ++   +  +KP+   FN+LIK  C+                      
Sbjct: 166 DGNSLKLVE--ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223

Query: 215 -------------RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
                         G L+ A  + ++M +   S+ N ++ + ++ G CK GR  +A+   
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN-VSVNVIVHGFCKEGRVEDALNFI 282

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           +EM ++D   PD  T+N L++G C+ G V  A +IM+ M   G +P+V+ Y ++++G CK
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G+++EA EV D+M      P+T+ Y TLI+  C+  +V+EA EL + +  +G   D+ T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           FN ++ GLC       A+ + E++   G   ++ +Y ++++  C KG+L++A+ +L+ M 
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKL 500
             G      T N L+   CKA    +A   +F  +E+ G    S ++  L++ +C+ R++
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAE-EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521

Query: 501 LFAFELLDELVIK 513
             A +L+D+++++
Sbjct: 522 EDAAQLMDQMIME 534



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 183/333 (54%), Gaps = 2/333 (0%)

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           +V+ A NF++  +      P+   FN L+   CK G ++ A E++  M +     P++ T
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD-PDVYT 332

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+++I GLCK G  +EA+E+ ++M+++D   P+ +TYN LI   C+  +V+ A ++   +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRD-CSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
            + G  P+V  + +L+ G C     + A E+F+EM++   +PD   Y  LI+  C  G++
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEAL +LK+M+  GC   ++T+N ++ G C+  K  EA  + +++   G+  N  +Y  +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++  C+   +E A +L+  M+  G  P   T N LL   C+ G  + AA  +  +   G 
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +P+  ++  L+  +C+  ++  A +LL  + +K
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 213/424 (50%), Gaps = 20/424 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARY----KKFEAVDAVLRQMTYETCKFHEGIF 133
           AL     +S Q GF  +  T+ T+++ L +        E +D +L++        +  + 
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337

Query: 134 LNLMKHFSNCSLHE--RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLK 190
             L      C L E    +E+  ++  ITR+  P+    +T ++ L + NQV+ A    +
Sbjct: 338 SGL------CKLGEVKEAVEVLDQM--ITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
                  L P+ C FN LI+  C       A E+ +EM+ S+   P+  TY+ LID LC 
Sbjct: 390 VLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMR-SKGCEPDEFTYNMLIDSLCS 447

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G+  EA+ + ++M          +TYN LIDGFC+  K   A++I + M+ +G + N  
Sbjct: 448 KGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y TL++G CK  ++++A ++ D+M     KPD   Y +L+  FCR G + +A ++++ M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
              GC+ DIVT+  ++ GLC+ G++E A  +L  +   GI L   +Y  V+    +K + 
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVR-LCKAGMA-EDAAIALFGLVEMGFKPESDSWA 488
            +AI L R ML +   P  A S  ++ R LC  G    +A   L  L+E GF PE  S  
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686

Query: 489 LLVE 492
           +L E
Sbjct: 687 MLAE 690



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 207/425 (48%), Gaps = 9/425 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  T+ T++         +    +  QM    C +   + +N++ H   C    RV
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW-SNVSVNVIVH-GFCK-EGRV 275

Query: 150 LEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            +  + I  ++ +    P     +T +N L ++  V  A   +    Q     P+   +N
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE-GYDPDVYTYN 334

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G ++ A EVL +M     S PN +TY+TLI  LCK  +  EA EL   + S
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCS-PNTVTYNTLISTLCKENQVEEATELARVLTS 393

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  ILPD  T+N LI G C       A ++ E M++ GC P+ F Y  L++  C +GKL 
Sbjct: 394 KG-ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +  +M+        I Y TLI+ FC+A +  EA E+  EM+  G   + VT+N ++
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+  ++E+A  +++++  +G   +K +Y  +L   C+ G+++KA ++++ M   G  
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T   L+  LCKAG  E A+  L  +   G      ++  +++ + R RK   A  L
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632

Query: 507 LDELV 511
             E++
Sbjct: 633 FREML 637



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 142/281 (50%), Gaps = 3/281 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    Y  ++  L ++G F +  ++ E+M S    +  + T+ +LI+ + +    D    
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTS-TFLILIESYAQFELQDEILS 139

Query: 296 IMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           ++++M +  G  P+   Y  ++N       L+  +    +M  + +KPD   +  LI   
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           CRA ++  A+ +L++M   G   D  TF  ++ G   EG ++ AL + E++   G   + 
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCR-GFLPHYATSNELLVRLCKAGMAEDAAIALF 473
            S  ++++  C++G +E A+  ++ M  + GF P   T N L+  LCKAG  + A   + 
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            +++ G+ P+  ++  ++  +C+  ++  A E+LD+++ ++
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360


>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g07740, mitochondrial; Flags: Precursor
 gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
 gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
 gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
 gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 222/388 (57%), Gaps = 5/388 (1%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           ++P+ AL +F+   E  GF H+  +Y++++ KLA+ + F+AVD +LR + Y   +  E +
Sbjct: 60  EDPEEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F+ L++H+      ++ +++FHKI      + ++++++T +N+L+++ +++ A++F    
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVR-TIQSLNTLINVLVDNGELEKAKSFFD-G 176

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            + +RL+PN+  FNILIK    +   E+A +V  EM + ++  P+++TY++LI  LC+N 
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQ-PSVVTYNSLIGFLCRND 235

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              +A  L E+M+ K +I P+A+T+ +L+ G C  G+ + AKK+M  M+  GC P + NY
Sbjct: 236 DMGKAKSLLEDMIKK-RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             LM+   K G++ EAK +  EMK   +KPD + Y  L+N  C   RV EA  +L EM+ 
Sbjct: 295 GILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +GCK +  T+ +++ G CR    +  L +L  +         A++  ++    + G L+ 
Sbjct: 355 KGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDH 414

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLC 460
           A  +L +M  +           LL  LC
Sbjct: 415 ACFVLEVMGKKNLSFGSGAWQNLLSDLC 442



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 178/387 (45%), Gaps = 45/387 (11%)

Query: 147 ERVLEMFHKIHPIT--REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           E  L +FH+   +    + PS  ++   L      + VD     ++Y N   R      +
Sbjct: 63  EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCR----ESL 118

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F  LI+H+ K G+++ A +V  ++  S      + + +TLI+ L  NG   +A   F+  
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKIT-SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG- 176

Query: 265 VSKD-QILPDALTYNVLIDGF-----------------------------------CRGG 288
            +KD ++ P+++++N+LI GF                                   CR  
Sbjct: 177 -AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            + +AK ++E M      PN   +  LM G C +G+  EAK++  +M+    KP  + Y 
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            L++   + GR+DEA  LL EMK+R  K D+V +NI++  LC E ++ EA  +L ++   
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N A+YR++++  C+  + +  + +L  ML     P  AT   ++  L K G  + A
Sbjct: 356 GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415

Query: 469 AIALFGLVEMGFKPESDSWALLVELIC 495
              L  + +      S +W  L+  +C
Sbjct: 416 CFVLEVMGKKNLSFGSGAWQNLLSDLC 442



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           +  LI    K G   +AI++F ++ S D +     + N LI+     G++++AK   +  
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRT-IQSLNTLINVLVDNGELEKAKSFFDGA 177

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           K+    PN  ++  L+ GF  +   + A +VFDEM    ++P  + Y +LI   CR   +
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            +A  LL++M ++  + + VTF +++ GLC +G+  EA  ++  + Y G      +Y I+
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++   ++G +++A  LL  M  R   P     N L+  LC      +A   L  +   G 
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357

Query: 481 KPESDSWALLVELICR 496
           KP + ++ ++++  CR
Sbjct: 358 KPNAATYRMMIDGFCR 373



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 5/294 (1%)

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           S F   +EM   +  YP   +YS+LI  L K+  F +A++    +V    +      +  
Sbjct: 67  SLFHQYQEMG-FRHDYP---SYSSLIYKLAKSRNF-DAVDQILRLVRYRNVRCRESLFMG 121

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI  + + G VD+A  +   + +  C   + +  TL+N     G+L++AK  FD  K+  
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L+P+++ +  LI  F      + A ++  EM E   +  +VT+N ++G LCR   + +A 
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +LE +    I  N  ++ +++   C KGE  +A +L+  M  RG  P       L+  L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            K G  ++A + L  + +   KP+   + +LV  +C   ++  A+ +L E+ +K
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 6/246 (2%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK--NNGCNPNVFNYT 313
           EA+ LF +   +     D  +Y+ LI    +    D   +I+  ++  N  C  ++F   
Sbjct: 64  EALSLFHQ-YQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF--M 120

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+  + K G + +A +VF ++ +F          TLIN     G +++A       K+ 
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
             + + V+FNI++ G   +   E A  + +++    +  +  +Y  ++ F C+  ++ KA
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV-E 492
             LL  M+ +   P+  T   L+  LC  G   +A   +F +   G KP   ++ +L+ +
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300

Query: 493 LICRGR 498
           L  RGR
Sbjct: 301 LGKRGR 306



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 102/280 (36%), Gaps = 43/280 (15%)

Query: 48  DTCVDARKRSRFISHGAAIS--LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKL 105
           D   D R R   +S    I   L KC+ E  C  ++F+ + E +    +  TY +++  L
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAAC--KVFDEMLEME-VQPSVVTYNSLIGFL 231

Query: 106 ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPS 165
            R        ++L  M  +  + +   F  LMK       +    ++   +      KP 
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME-YRGCKPG 290

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           L      ++ L +  ++D A+  L    +  R+KP+  I+NIL+ H C    +  A+ VL
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKR-RIKPDVVIYNILVNHLCTECRVPEAYRVL 349

Query: 226 KEMKKSQMSYPNLITYSTLIDGLC-----------------------------------K 250
            EM+      PN  TY  +IDG C                                   K
Sbjct: 350 TEMQMKGCK-PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIK 408

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
            G    A  + E M  K+         N+L D   + G V
Sbjct: 409 GGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGV 448


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 221/441 (50%), Gaps = 46/441 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALEIF     + G      TY TI++ L +     A                        
Sbjct: 20  ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGA------------------------ 55

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  L E ++E  H         P +   +T ++ L ++  ++ A+    + +   R
Sbjct: 56  ----GMELFEELVERGH--------HPDVVTYNTLIDSLCKAGDLEEARRL--HGDMSSR 101

Query: 198 -LKPNTCIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFR 255
              PN   +++LI   CK G ++ A E+++EM +KS    PN+ITY++ +DGLCK     
Sbjct: 102 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 161

Query: 256 EAIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           EA EL   +     ++ PD +T++ LIDG C+ G++D A  + + M   G  PNV  Y  
Sbjct: 162 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 221

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK  K++ A  + + M +  + PD I Y+ L++ FC+A RVDEALELL  M  RG
Sbjct: 222 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 281

Query: 375 CKADI-----VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           C  ++     VTFNI++ G C+ G  E+A  + E++    +  +  ++  +++  C+ G+
Sbjct: 282 CTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 341

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +E A ++L LM   G  P+  T N L+  LCK+G  E+A   L  +V  G  P+S ++  
Sbjct: 342 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 401

Query: 490 LVELICRGRKLLFAFELLDEL 510
           LV  +CR  +   A +L+ EL
Sbjct: 402 LVYALCRASRTDDALQLVSEL 422



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 213/421 (50%), Gaps = 42/421 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSL 145
            +G   N  TY+ +++ L +  + +    ++++MT ++C     I  + + +      S+
Sbjct: 100 SRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 159

Query: 146 HERVLEMFHKIHPIT-REKPSLKAISTCLNLLIESNQVDLA-------------QNFLKY 191
                E+   +   + R  P     ST ++ L +  Q+D A              N + Y
Sbjct: 160 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITY 219

Query: 192 S-------------NQHLRLK--------PNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           +               H  ++        P+   +++L+   CK   ++ A E+L  M  
Sbjct: 220 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 279

Query: 231 SQMS----YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
              +     P+ +T++ LI G CK G F +A  LFEEMV+K+ + PD +T+  LIDG C+
Sbjct: 280 RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN-LQPDVMTFGALIDGLCK 338

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G+V+ A+ I++ M N G  PNV  Y  L++G CK G+++EA +  +EM +    PD+I 
Sbjct: 339 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 398

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y +L+   CRA R D+AL+L+ E+K  G   D VT+NI++ GL + GK E+A+ +LE++ 
Sbjct: 399 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 458

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G   +  ++    +   + G L   +ELLR++L +G LP   T + +L  +C++G  +
Sbjct: 459 GKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518

Query: 467 D 467
           D
Sbjct: 519 D 519



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 224/446 (50%), Gaps = 16/446 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            +E+F  + E +G + +  TY T++D L +    E    +   M+   C  +   +  L+
Sbjct: 56  GMELFEELVE-RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLI 114

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK----PSLKAISTCLNLLIESNQVDLAQNFLK-YS 192
                     R+ E    I  +TR+     P++   ++ L+ L + +    A   ++   
Sbjct: 115 NGLCKVG---RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 171

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           +  LR+ P+T  F+ LI   CK G ++ A  V  +M       PN+ITY+ L++GLCK  
Sbjct: 172 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY-VPNVITYNALVNGLCKAD 230

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF-- 310
           +   A  + E MV K  + PD +TY+VL+D FC+  +VD A +++  M + GC PNV   
Sbjct: 231 KMERAHAMIESMVDK-GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP 289

Query: 311 ---NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
               +  L+ G CK G  ++A  +F+EM    L+PD + +  LI+  C+AG+V+ A ++L
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M   G   ++VT+N ++ GLC+ G+IEEA   LE++   G   +  +Y  ++   C+ 
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
              + A++L+  +   G+ P   T N L+  L K+G  E A   L  +V  G +P+S ++
Sbjct: 410 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469

Query: 488 ALLVELICRGRKLLFAFELLDELVIK 513
           A     + R   L    ELL  ++ K
Sbjct: 470 AACFSGLHRSGNLAGTMELLRVVLAK 495



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 191/362 (52%), Gaps = 52/362 (14%)

Query: 205 FNILIKHHCKRGTLESAFEVLK-EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +NI+++  C+ G    A E+ + EM +  ++ P ++TY+T+I+GLCK+      +ELFEE
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVA-PTIVTYNTIINGLCKSNDLGAGMELFEE 62

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           +V +    PD +TYN LID  C+ G ++ A+++   M + GC PNV  Y+ L+NG CK G
Sbjct: 63  LVERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121

Query: 324 KLQEAKEVFDEM--------------KNFL-------------------------LKPDT 344
           ++ EA+E+  EM               +FL                         + PDT
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + ++TLI+  C+ G++DEA  +  +M   G   +++T+N ++ GLC+  K+E A  M+E 
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG-----FLPHYATSNELLVRL 459
           +   G+  +  +Y ++++  C+   +++A+ELL  M  RG      +P   T N L+   
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQ 519
           CKAG  E A+     +V    +P+  ++  L++ +C+  ++  A ++LD +     G + 
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM-----GNLG 356

Query: 520 VP 521
           VP
Sbjct: 357 VP 358



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 167/349 (47%), Gaps = 34/349 (9%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  N  TY  +++ L +  K E   A++  M  +        +  L+  F   S  +  
Sbjct: 211 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 270

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           LE+ H           + +     N+L+                      P+   FNILI
Sbjct: 271 LELLH----------GMASRGCTPNVLV----------------------PDKVTFNILI 298

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G  E A  + +EM    +  P+++T+  LIDGLCK G+   A ++ + ++    
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQ-PDVMTFGALIDGLCKAGQVEAARDILD-LMGNLG 356

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + P+ +TYN L+ G C+ G+++ A + +E M ++GC P+   Y +L+   C+  +  +A 
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++  E+K+F   PDT+ Y  L++   ++G+ ++A+ +L+EM  +G + D  TF     GL
Sbjct: 417 QLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            R G +   + +L  +   G+  +  +   +L++ C+ G+L+    +++
Sbjct: 477 HRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIK 525



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 110/208 (52%), Gaps = 5/208 (2%)

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           V +Y  ++   C+ G    A E+F  EM    + P  + Y T+IN  C++  +   +EL 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           +E+ ERG   D+VT+N ++  LC+ G +EEA  +   +   G   N  +Y +++N  C+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 428 GELEKAIELLRLMLCRG--FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK--PE 483
           G +++A EL++ M  +    LP+  T N  L  LCK  M  +A   +  L +   +  P+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
           + +++ L++ +C+  ++  A  + D+++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMI 208



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%)

Query: 379 IVTFNIILGGLCREGKIEEALGMLE-KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +  +NI+L  LCR G    AL +   ++  DG+     +Y  ++N  C+  +L   +EL 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             ++ RG  P   T N L+  LCKAG  E+A      +   G  P   ++++L+  +C+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 498 RKLLFAFELLDELVIK 513
            ++  A EL+ E+  K
Sbjct: 121 GRIDEARELIQEMTRK 136


>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
 gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
          Length = 427

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 235/464 (50%), Gaps = 48/464 (10%)

Query: 36  NTPKADPPVETSDTCVDARKR--SRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNH 93
           N PKA P          +R R  + F++H      +K  ++P  AL +F+    Q+GF  
Sbjct: 9   NKPKAKPRHRRKGHKTSSRNRNDAPFVNH------VKEARDPVEALTLFHEYL-QRGFKP 61

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           +  +YA +L KLAR + F AV+ VLR +  +     E IF+ L +H+    L  + +E+F
Sbjct: 62  DYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQETIFIALFQHYGKAQLVHKAVELF 121

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +++      + S +++++ LN+L+++    L  N L      +  + N+  FN++IK   
Sbjct: 122 NRMTRFNCVRTS-QSLNSLLNVLVDNGWF-LEANELFDKGYEMGFRLNSVAFNVMIKGWL 179

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           ++G  E A +V  EM + ++  P+++TY++LI  LC+NG   +A  L E+M+ K +  P+
Sbjct: 180 EKGEWEQASKVFDEMLERKVE-PSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGK-RPN 237

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           A+T+ +L++G C  G+ + AKK+M  M+  GC P V N+  LM+   K GK+ EAK V  
Sbjct: 238 AITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLH 297

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           EMK   +KPD + Y  LIN  C+ GR  +A E+L EM+  GC+A+  T+ +++ G CR G
Sbjct: 298 EMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVG 357

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
                                              + E  +++L  ML  G  P   T  
Sbjct: 358 -----------------------------------DFEGGLKVLNAMLTSGHFPRVETFR 382

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            L+V L K+G  + A   L  + +      +D W  LV   CRG
Sbjct: 383 SLVVGLVKSGNLDGACFVLEEMEKRQMMFCADDWEALVMESCRG 426



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 131/277 (47%), Gaps = 1/277 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+  +Y+ L+  L +   F  A+E     V    +      +  L   + +   V +A +
Sbjct: 61  PDYPSYAALLYKLARCQDF-GAVEEVLRYVEDKNVHCQETIFIALFQHYGKAQLVHKAVE 119

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M    C     +  +L+N     G   EA E+FD+      + +++ +  +I  + 
Sbjct: 120 LFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIKGWL 179

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
             G  ++A ++  EM ER  +  +VT+N ++G LCR G++++A G+LE +   G   N  
Sbjct: 180 EKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAI 239

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++ +++  SC  GE  +A +++  M  RG  P       L+  L K G  ++A   L  +
Sbjct: 240 TFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEM 299

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
            +   KP+  ++ +L+  +C+  +   A+E+L E+ +
Sbjct: 300 KKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQV 336


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 226/421 (53%), Gaps = 11/421 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+  ++       + ++  ++LR MT   C  +  I+  L+   S C+     L++  ++
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCK 214
             +    P  +  +  +  L + ++++ A    K  N+ L     P+   +  L+   CK
Sbjct: 279 F-LMGCVPDAETFNDVILGLCKFDRINEAA---KMVNRMLIRGFAPDDITYGYLMNGLCK 334

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
            G +++A ++   + K     P ++ ++TLI G   +GR  +A  +  +MV+   I+PD 
Sbjct: 335 IGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            TYN LI G+ + G V  A +++  M+N GC PNV++YT L++GFCK GK+ EA  V +E
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M    LKP+T+G+  LI+ FC+  R+ EA+E+ +EM  +GCK D+ TFN ++ GLC   +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           I+ AL +L  +  +G+  N  +Y  ++N   ++GE+++A +L+  M+ +G      T N 
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L+  LC+AG  + A      ++  G  P + S  +L+  +CR   +  A E   E+V++ 
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629

Query: 515 S 515
           S
Sbjct: 630 S 630



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 231/470 (49%), Gaps = 35/470 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ++E+F+    Q G+ H+   Y  ++ KL    +F+ +D +L QM  E   F E +F+++M
Sbjct: 94  SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           + +       +   +  ++  +   +P+ K+ +  L +L+  N   +A N   Y     +
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF-YDMLSRK 212

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P    F +++K  C    ++SA  +L++M K     PN + Y TLI  L K  R  EA
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTK-HGCVPNSVIYQTLIHSLSKCNRVNEA 271

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L EEM     + PDA T+N +I G C+  +++ A K++  M   G  P+   Y  LMN
Sbjct: 272 LQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330

Query: 318 GFCKEGKLQEAKEVF--------------------------------DEMKNFLLKPDTI 345
           G CK G++  AK++F                                D + ++ + PD  
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y +LI  + + G V  ALE+L +M+ +GCK ++ ++ I++ G C+ GKI+EA  +L ++
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
             DG+  N   +  +++  C++  + +A+E+ R M  +G  P   T N L+  LC+    
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           + A   L  ++  G    + ++  L+    R  ++  A +L++E+V + S
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 197/359 (54%), Gaps = 7/359 (1%)

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
           ++F++I      KP +   +T ++  +   ++D A+  L        + P+ C +N LI 
Sbjct: 343 DLFYRI-----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            + K G +  A EVL +M+ ++   PN+ +Y+ L+DG CK G+  EA  +  EM S D +
Sbjct: 398 GYWKEGLVGLALEVLHDMR-NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM-SADGL 455

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            P+ + +N LI  FC+  ++  A +I   M   GC P+V+ + +L++G C+  +++ A  
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  +M +  +  +T+ Y TLIN F R G + EA +L+ EM  +G   D +T+N ++ GLC
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           R G++++A  + EK+  DG   +  S  I++N  C+ G +E+A+E  + M+ RG  P   
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
           T N L+  LC+AG  ED       L   G  P++ ++  L+  +C+G  +  A  LLDE
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 202/410 (49%), Gaps = 15/410 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  ++ TY  +++ L +  + +A     + + Y   K    IF  L+  F     H R
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVT---HGR 368

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLI---ESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           + +    +  +      +  + T  +L+    +   V LA   L +  ++   KPN   +
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL-HDMRNKGCKPNVYSY 427

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
            IL+   CK G ++ A+ VL EM    +  PN + ++ LI   CK  R  EA+E+F EM 
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLK-PNTVGFNCLISAFCKEHRIPEAVEIFREMP 486

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K    PD  T+N LI G C   ++  A  ++  M + G   N   Y TL+N F + G++
Sbjct: 487 RKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545

Query: 326 QEAKEVFDEMKNFLLKP-DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +EA+++ +EM  F   P D I Y +LI   CRAG VD+A  L ++M   G     ++ NI
Sbjct: 546 KEARKLVNEMV-FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLCR G +EEA+   +++   G   +  ++  ++N  C+ G +E  + + R +   G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
             P   T N L+  LCK G   DA + L   +E GF P   +W++L++ I
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 13/256 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+EIF  +  +KG   +  T+ +++  L    + +    +LR M  E    +   +  L+
Sbjct: 478 AVEIFREMP-RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLK--YSN 193
             F        + E    ++ +  +   L  I+  + +  L  + +VD A++  +    +
Sbjct: 537 NAFLR---RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            H    P+    NILI   C+ G +E A E  KEM   + S P+++T+++LI+GLC+ GR
Sbjct: 594 GH---APSNISCNILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVTFNSLINGLCRAGR 649

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             + + +F ++   + I PD +T+N L+   C+GG V  A  +++    +G  PN   ++
Sbjct: 650 IEDGLTMFRKL-QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708

Query: 314 TLMNGFCKEGKLQEAK 329
            L+     +  L   +
Sbjct: 709 ILLQSIIPQETLDRRR 724


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 112/295 (37%), Positives = 174/295 (58%), Gaps = 2/295 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P    FN LI   CK G +E  F  LK + +S+   P++ T+S LI+GLCK GR  E 
Sbjct: 173 LRPTVVSFNTLISGCCKAGAVEEGFR-LKGVMESERVCPDVFTFSALINGLCKEGRLDEG 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM  K  ++P+ +T+ VLIDG C+GGKVD A K  + M   G  P++  Y  L+N
Sbjct: 232 SLLFDEMCGKG-LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G L+EA+ + +EM    L+PD I +TTLI+  C+ G ++ ALE+ + M E G + 
Sbjct: 291 GLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIEL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V F +++ GLCR+G++ +A  ML  +   G   +  +Y +V++  C+KG +    +LL
Sbjct: 351 DDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLL 410

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + M   G +P   T N L+  LCK G  ++A + L  ++ +G  P   ++ +L+E
Sbjct: 411 KEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLE 465



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 156/275 (56%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN   ++ L+ G CK G    A  +F+E + K  + P  +++N LI G C+ G V+   +
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDE-IPKRGLRPTVVSFNTLISGCCKAGAVEEGFR 198

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M++    P+VF ++ L+NG CKEG+L E   +FDEM    L P+ + +T LI+  C
Sbjct: 199 LKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQC 258

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+VD AL+  + M  +G + D+VT+N ++ GLC+ G ++EA  ++ ++   G+  ++ 
Sbjct: 259 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRI 318

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  +++  C+ G++E A+E+ R M+  G          L+  LC+ G   DA   L  +
Sbjct: 319 TFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDM 378

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  GFKP+  ++ ++V+  C+   +   F+LL E+
Sbjct: 379 LSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEM 413



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 118/210 (56%)

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           ++G  PN F +  LM+GFCK G +  A+ VFDE+    L+P  + + TLI+  C+AG V+
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           E   L   M+      D+ TF+ ++ GLC+EG+++E   + +++   G+  N  ++ +++
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLI 254

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G+++ A++  ++ML +G  P   T N L+  LCK G  ++A   +  +   G +
Sbjct: 255 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLR 314

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELV 511
           P+  ++  L++  C+   +  A E+   +V
Sbjct: 315 PDRITFTTLIDGCCKYGDMESALEIKRRMV 344


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 265/553 (47%), Gaps = 64/553 (11%)

Query: 6   FSLRKCCRFSSFSTS--------SSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRS 57
            +   C +F  FS S        S SL    P   I   +P +   + +SD  +      
Sbjct: 1   MAFSSCLKFYPFSISQAVTLTHHSFSLKLTPPSSTISFASPNS-AALSSSDVKL------ 53

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAV 117
                   +  ++ + +   AL +FN  S++  F+   A Y  IL +L R   F+ +  +
Sbjct: 54  --------LDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKI 105

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
           L  M    C+     FL L++ ++   L + +L + H +      KP     +  LNLL+
Sbjct: 106 LEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLV 165

Query: 178 ESNQVDLAQNFLKYSNQHL-RLKPNTCIFNILIKHHCK---------------------- 214
           + N + L +  + ++   +  +KP+   FN+LIK  C+                      
Sbjct: 166 DGNNLKLVE--IAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223

Query: 215 -------------RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
                         G L+ A  + ++M +   S+ N ++ + ++ G CK GR  +A+   
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSN-VSVNVIVHGFCKEGRVEDALNFI 282

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           +EM ++D   PD  T+N L++G C+ G V  A +IM+ M   G +P+V+ Y ++++G CK
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G+++EA E  D+M      P+T+ Y TLI+  C+  +V+EA EL + +  +G   D+ T
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           FN ++ GLC       A+ + E++   G   ++ +Y ++++  C KG+L++A+ +L+ M 
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKL 500
             G      T N L+   CKA    +A   +F  +E+ G    S ++  L++ +C+ R++
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKIREAE-EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521

Query: 501 LFAFELLDELVIK 513
             A +L+D+++++
Sbjct: 522 EDASQLMDQMIME 534



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 183/333 (54%), Gaps = 2/333 (0%)

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           +V+ A NF++  +      P+   FN L+   CK G ++ A E++  M +     P++ T
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD-PDVYT 332

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+++I GLCK G  +EA+E  ++M+++D   P+ +TYN LI   C+  +V+ A ++   +
Sbjct: 333 YNSVISGLCKLGEVKEAVEFLDQMITRD-CSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
            + G  P+V  + +L+ G C     + A E+F+EM++   +PD   Y  LI+  C  G++
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEAL +LK+M+  GC   ++T+N ++ G C+  KI EA  + +++   G+  N  +Y  +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++  C+   +E A +L+  M+  G  P   T N LL   C+ G  + AA  +  +   G 
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +P+  ++  L+  +C+  ++  A +LL  + +K
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 207/425 (48%), Gaps = 9/425 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  T+ TI+         +    +  QM    C +   + +N++ H   C    RV
Sbjct: 219 GLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSW-SNVSVNVIVH-GFCK-EGRV 275

Query: 150 LEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            +  + I  ++ +    P     +T +N L ++  V  A   +    Q     P+   +N
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE-GYDPDVYTYN 334

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G ++ A E L +M     S PN +TY+TLI  LCK  +  EA EL   + S
Sbjct: 335 SVISGLCKLGEVKEAVEFLDQMITRDCS-PNTVTYNTLISTLCKENQVEEATELARVLTS 393

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  ILPD  T+N LI G C       A ++ E M++ GC P+ F Y  L++  C +GKL 
Sbjct: 394 KG-ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +  +M+        I Y TLI+ FC+A ++ EA E+  EM+  G   + VT+N ++
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLI 512

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+  ++E+A  +++++  +G   +K +Y  +L   C+ G+++KA ++++ M   G  
Sbjct: 513 DGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T   L+  LCKAG  E A+  L  +   G      ++  +++ + R RK   A  L
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINL 632

Query: 507 LDELV 511
             E++
Sbjct: 633 FREML 637



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 135/308 (43%), Gaps = 37/308 (12%)

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           L+D L        A+ LF     K    P+   Y  ++    R G  D  +KI+E MKN+
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112

Query: 304 GC------------------------------------NPNVFNYTTLMNGFCKEGKLQE 327
           GC                                     P+   Y  ++N       L+ 
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
            +    +M  + +KPD   +  LI   CRA ++  A+ +L++M   G   D  TF  I+ 
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR-GFL 446
           G   EG ++ AL + E++   G   +  S  ++++  C++G +E A+  ++ M  + GF 
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T N L+  LCKAG  + A   +  +++ G+ P+  ++  ++  +C+  ++  A E 
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 507 LDELVIKE 514
           LD+++ ++
Sbjct: 353 LDQMITRD 360



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 13/265 (4%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           + A+E+F  +   KG   +  TY  ++D L    K +    +L+QM    C      +  
Sbjct: 417 RVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475

Query: 136 LMKHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           L+  F   +      E+F   ++H ++R   +    +T ++ L +S +V+ A   +    
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTY---NTLIDGLCKSRRVEDASQLMDQMI 532

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
              + KP+   +N L+ H C+ G ++ A ++++ M  S    P+++TY TLI GLCK GR
Sbjct: 533 MEGQ-KPDKFTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEPDIVTYGTLISGLCKAGR 590

Query: 254 FREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFN 311
              A +L   +  K   L P A  YN +I G  R  K   A  +  E ++ N   P+  +
Sbjct: 591 VEVASKLLRSIQMKGIALTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVS 648

Query: 312 YTTLMNGFCK-EGKLQEAKEVFDEM 335
           Y  +  G C   G ++EA +   E+
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVEL 673


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 249/484 (51%), Gaps = 40/484 (8%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           I  ++ + +   AL +FN  S+Q  F  +++ Y  IL KL +   FE +  VL +M    
Sbjct: 68  IETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSG 127

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
           C+F  GIFL  ++ +    L++ V+ +   +    R KP  +  +  LN+L+++N++ L 
Sbjct: 128 CEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLV 187

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST-- 243
           ++    S    R++ +   FNILIK  CK   +  A  +++EM    +S P+  T++T  
Sbjct: 188 ES-AHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLS-PDETTFTTIM 245

Query: 244 ---------------------------------LIDGLCKNGRFREAIELFEEMVSKDQI 270
                                            LI+G CK GR  +A+   +E VS +  
Sbjct: 246 QGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVS-EGF 304

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PD  TYN L++G C+ G    A ++++ M   G +P+++ Y +L++G CK G+++EA +
Sbjct: 305 RPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVK 364

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + D+M +    P+ + Y  +I+  C+  RVDEA E+ + +  +G   D+ TFN ++ GLC
Sbjct: 365 ILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLC 424

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
                + A+ + E++   G   ++ +Y ++++  C   +LE+A+ LL+ M   G   +  
Sbjct: 425 LSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVV 484

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDE 509
             N L+   CK    E+A   +F  +E+ G   +S ++  L++ +C+ +++  A +L+D+
Sbjct: 485 IYNTLIDGFCKNKRIEEAE-EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQ 543

Query: 510 LVIK 513
           ++++
Sbjct: 544 MIME 547



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 191/354 (53%), Gaps = 5/354 (1%)

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            ++  +N   +  ++D A +F++ +      +P+   +N L+   CK G  + A EV+  
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSE-GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M    +  P++ TY++LI GLCK G   EA+++ ++MVS+D   P+A+TYN +I   C+ 
Sbjct: 334 MLLGGLD-PDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD-CSPNAVTYNAIISSLCKE 391

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            +VD A +I   + + G  P+V  + +L+ G C     + A ++F+EMK    +PD   Y
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             LI+  C + +++EAL LLKEM+  GC  ++V +N ++ G C+  +IEEA  + +++  
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  +  +Y  +++  C+   +E A +L+  M+  G  P   T N LL   CK G  + 
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           AA  +  +   G  P+  ++A L+  +C+  ++  A  LL  + +K  G +  P
Sbjct: 572 AADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK--GMVLTP 623



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 168/316 (53%), Gaps = 2/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N LI   CK G +E A ++L +M     S PN +TY+ +I  LCK  R  EA
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS-PNAVTYNAIISSLCKENRVDEA 397

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+   + SK  ILPD  T+N LI G C       A  + E MK  GC P+ F Y  L++
Sbjct: 398 TEIARLLTSKG-ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLID 456

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C   KL+EA  +  EM+      + + Y TLI+ FC+  R++EA E+  EM+ +G   
Sbjct: 457 SLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSR 516

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT+N ++ GLC+  ++E+A  +++++  +G+  +K +Y  +L   C+ G+++KA +++
Sbjct: 517 DSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIV 576

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M   G  P   T   L+  LCKAG  + A+  L  +   G      ++  +++ + + 
Sbjct: 577 QTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKR 636

Query: 498 RKLLFAFELLDELVIK 513
            +   A  L  E++ K
Sbjct: 637 NRTHEAMRLFREMLDK 652



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 209/423 (49%), Gaps = 21/423 (4%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARY----KKFEAVDAVLRQMTYETCKFHEGIFLNL 136
           I   VSE  GF  +  TY T+++ L +        E VDA+L          +  +   L
Sbjct: 296 IQEAVSE--GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 137 MKHFSNCSLHERVLEMFHKI--HPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
                 C L E  +E   KI    ++R+  P+    +  ++ L + N+VD A    +   
Sbjct: 354 ------CKLGE--IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLT 405

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
               L P+ C FN LI+  C     +SA ++ +EMK  +   P+  TY+ LID LC + +
Sbjct: 406 SKGIL-PDVCTFNSLIQGLCLSSNHKSAMDLFEEMK-GKGCRPDEFTYNMLIDSLCSSRK 463

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA+ L +EM   +    + + YN LIDGFC+  +++ A++I + M+  G + +   Y 
Sbjct: 464 LEEALNLLKEM-ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL++G CK  ++++A ++ D+M    L+PD   Y +L+  FC+ G + +A ++++ M   
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  DIVT+  ++ GLC+ G+++ A  +L  +   G+ L   +Y  V+    ++    +A
Sbjct: 583 GCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEA 642

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL-FGLVEMGFKPESDSWALLVE 492
           + L R ML +   P   T   +   LC  G     A+     ++E G  PE  S+ +L E
Sbjct: 643 MRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAE 702

Query: 493 LIC 495
            +C
Sbjct: 703 GLC 705



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 147/330 (44%), Gaps = 36/330 (10%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A     ++++     P++ ++  +++   K G+ E    VL+EMK S   +   I +   
Sbjct: 80  ALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGI-FLIF 138

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           ++   K   + E + + + M  + +I PD   YNVL++      K+   +     M    
Sbjct: 139 VESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR 198

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +V  +  L+   CK  +++ A  + +EM ++ L PD   +TT++  +   G +D AL
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            + ++M E GC    VT N+++ G                                    
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGF----------------------------------- 283

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C++G +++A+  ++  +  GF P   T N L+  LCK G A+ A   +  ++  G  P+ 
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIKE 514
            ++  L+  +C+  ++  A ++LD++V ++
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRD 373


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 223/456 (48%), Gaps = 48/456 (10%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           +N T   ++  L    + +    ++ +M +     +   +  L+     C   ER+ E  
Sbjct: 73  DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC---ERLDEAV 129

Query: 154 HKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
             +  +      P++   ++ +     + +VD A  F++         P+   +  LI  
Sbjct: 130 ALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE-GCHPDIITYTALIGG 188

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CK   +    E+L E+ +   + P+++TYST+IDGLCK GR R+A+++FEEM       
Sbjct: 189 FCKSRDVGRGLELLGEVTRRGFT-PDIVTYSTVIDGLCKAGRLRDAVDIFEEM----SCA 243

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P A+TYN LI G+CR G +D A +++  M ++ C P+V  YTTLM+ FCK G+L +A E+
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI------------ 379
           F +M    L PD + +T+L++  C  GR+++ALELL+E+  RGC   I            
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 363

Query: 380 -----------------------VTFNIILGGLCREGKIEEALGMLEKLWYDG--IYLNK 414
                                  VT+NI++ G CR G+ ++AL  L++L  +G     + 
Sbjct: 364 ANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSV 423

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           A Y I+L+  C+ G  + A++    M+ RG++P  AT   ++  LCKA   + A   L  
Sbjct: 424 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 483

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +++ G  P   +   +V   CR   +  A EL  EL
Sbjct: 484 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 220/414 (53%), Gaps = 16/414 (3%)

Query: 60  ISHGAAI-SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           I++ A +  L KCE+  + A+ +  T++E +G      TY +I+    R ++ +     +
Sbjct: 110 ITYSALVDGLCKCERLDE-AVALVETMAE-RGCAPTVVTYNSIITGFCRARRVDEAHGFM 167

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLL 176
            QM  E C      +  L+  F       R LE+  ++   TR    P +   ST ++ L
Sbjct: 168 EQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEV---TRRGFTPDIVTYSTVIDGL 224

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
            ++ ++  A +      + +   P    +N LI  +C+ G ++ A  +L +M   + + P
Sbjct: 225 CKAGRLRDAVDIF----EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCA-P 279

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           +++TY+TL+   CK GR  +A ELF++MV+ +++ PD +T+  L+DG C  G+++ A ++
Sbjct: 280 DVVTYTTLMSAFCKMGRLDDAYELFQQMVA-NKLSPDVVTFTSLVDGLCGEGRMEDALEL 338

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +E +   GC P ++ Y  +++G+CK  ++++A+E+  + ++    P+T+ Y  L+   CR
Sbjct: 339 LEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398

Query: 357 AGRVDEALELLKEMKERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           AGR D+AL+ L ++   G  C   +  + IIL  LCR+G+ ++A+   E++   G     
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 458

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           A++  V+   C+  + ++A ELL  M+  G  P   T + ++   C+AGM + A
Sbjct: 459 ATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P  + ++ +I GLC+ GR R A+ ++ +M   D   PD LTY  L+ G  +  ++  A +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQM--NDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M +    P+    T ++   C   ++ +A+E+ +EM +  +  + I Y+ L++  C
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +  R+DEA+ L++ M ERGC   +VT+N I+ G CR  +++EA G +E++  +G + +  
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  ++   C+  ++ + +ELL  +  RGF P   T + ++  LCKAG   D A+ +F  
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD-AVDIF-- 237

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            EM   P + ++  L+   CR   +  A  LL ++V
Sbjct: 238 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 273



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 148/330 (44%), Gaps = 43/330 (13%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNL 136
            LE+   V+ ++GF  +  TY+T++D L +  +  +AVD +  +M+   C      + +L
Sbjct: 198 GLELLGEVT-RRGFTPDIVTYSTVIDGLCKAGRLRDAVD-IFEEMS---CAPTAITYNSL 252

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           +  +      +  + +  K+    +  P +   +T ++   +  ++D A    +    + 
Sbjct: 253 IGGYCRAGDMDEAIRLLGKMVD-DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVAN- 310

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-------------------------- 230
           +L P+   F  L+   C  G +E A E+L+E+ +                          
Sbjct: 311 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKA 370

Query: 231 --------SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT-YNVLI 281
                   S+   PN +TY+ L+ G C+ GR  +A++  +++ S+    P ++  Y +++
Sbjct: 371 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 430

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  CR G+ D A +  E M   G  P    + T++   CK  + Q+A E+ +EM  +   
Sbjct: 431 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 490

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           P       +++ +CRAG + +A EL  E++
Sbjct: 491 PGPGTCDAVVSAYCRAGMIQKADELASELR 520



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 107/205 (52%), Gaps = 1/205 (0%)

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
           NP    +  ++ G C+ G+L+ A  V+ +M N    PD + YT L++   +A R+ +A++
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           +L+EM       D  T  +++  LC   ++++A  ++E++ + G+  N  +Y  +++  C
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           +   L++A+ L+  M  RG  P   T N ++   C+A   ++A   +  +V  G  P+  
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 486 SWALLVELICRGRKLLFAFELLDEL 510
           ++  L+   C+ R +    ELL E+
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEV 205


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 145/552 (26%), Positives = 260/552 (47%), Gaps = 108/552 (19%)

Query: 65  AISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
            + L+K EK P+ A  +F++ +   G+ H+   Y  IL +L+  +    V  ++  +  +
Sbjct: 13  VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQ 72

Query: 125 TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
            CK  E + L+++K +   S+ +R L++F ++  I   +P +++ +T LN  +E+ Q   
Sbjct: 73  ECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVK 132

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
            ++   Y  +   + PN   +N+LIK  CK+   E A   L  M K     P++ +YST+
Sbjct: 133 VESLFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFK-PDVFSYSTV 190

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG----------------- 287
           I+ L K G+  +A+ELF+EM S+ ++ PD   YN+LIDGF +                  
Sbjct: 191 INDLAKTGKLDDALELFDEM-SERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDS 249

Query: 288 -------------------GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
                              G+VD   KI + MK N    +++ Y++L++G C EG + +A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKA 309

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER--------------- 373
           + VF+E+       D + Y T++  FCR G++ E+LEL + M++R               
Sbjct: 310 ESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGL 369

Query: 374 -------------------GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
                              G  AD  T+ I + GLC  G + +ALG+++++   G +L+ 
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDV 429

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLM------------------------------LCRG 444
            +Y  +++  C+K  LE+A  L++ M                              L RG
Sbjct: 430 YAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRG 489

Query: 445 F-----LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
                 LP   + N L+  LC+AG   +A+  +  ++E G KP+  ++++L+  +CR RK
Sbjct: 490 MGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRK 549

Query: 500 LLFAFELLDELV 511
           +  A EL  + +
Sbjct: 550 IELALELWHQFL 561



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 226/470 (48%), Gaps = 46/470 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+F+ +SE++    +   Y  ++D   + K  +    +  ++  ++  +      N+M
Sbjct: 203 ALELFDEMSERR-VAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIM 261

Query: 138 -KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
               S C   +  L+++ ++    REK  L   S+ ++ L +   VD A++     N+ +
Sbjct: 262 ISGLSKCGRVDDCLKIWDRMKQNEREK-DLYTYSSLIHGLCDEGNVDKAESVF---NELV 317

Query: 197 RLKP--NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
             K   +   +N ++   C+ G ++ + E+ + M+  Q +  N+++Y+ LI GL +NG+ 
Sbjct: 318 ERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIME--QRNSVNIVSYNILIKGLLENGKI 375

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA  ++  M +K     D  TY + I G C  G V++A  +M+ +++ G + +V+ Y +
Sbjct: 376 DEATMIWRLMPAKGYA-ADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYAS 434

Query: 315 LMNGFCKEGKLQEAKEVFDEMK---------------------------NFLLK------ 341
           +++  CK+ +L+EA  +  EM                            + L++      
Sbjct: 435 IIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNG 494

Query: 342 --PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             P  + Y  LI   C AG+  EA   +KEM E G K D+ T++I+LGGLCR+ KIE AL
Sbjct: 495 CLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELAL 554

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +  +    G+  +   + I+++  C  G+L+ A+ ++  M  R    +  T N L+   
Sbjct: 555 ELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGY 614

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            K   +  A +    + +MG +P+  S+  +++ +C   ++ +A E  D+
Sbjct: 615 FKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDD 664



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 193/435 (44%), Gaps = 46/435 (10%)

Query: 61  SHGAAIS-LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +H   IS L KC +   C L+I++ + +Q     +  TY++++  L      +  ++V  
Sbjct: 257 THNIMISGLSKCGRVDDC-LKIWDRM-KQNEREKDLYTYSSLIHGLCDEGNVDKAESVFN 314

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLI 177
           ++           +  ++  F  C   +  LE++     I  ++ S+  +S    +  L+
Sbjct: 315 ELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWR----IMEQRNSVNIVSYNILIKGLL 370

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           E+ ++D A    +          NT  + I I   C  G +  A  V++E++ S+  + +
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADNT-TYGIFIHGLCVNGYVNKALGVMQEVE-SKGGHLD 428

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEM--------------------------------- 264
           +  Y+++ID LCK  R  EA  L +EM                                 
Sbjct: 429 VYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMR 488

Query: 265 -VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
            + K+  LP  ++YN+LI G C  GK   A   ++ M  NG  P++  Y+ L+ G C++ 
Sbjct: 489 GMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDR 548

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K++ A E++ +     L+PD + +  LI+  C  G++D+A+ ++  M+ R C A++VT+N
Sbjct: 549 KIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G  +      A  +   ++  G+  +  SY  +L   C    +  AIE        
Sbjct: 609 TLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNH 668

Query: 444 GFLPHYATSNELLVR 458
           G  P   T N +LVR
Sbjct: 669 GIFPTVYTWN-ILVR 682


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 238/536 (44%), Gaps = 105/536 (19%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ++E+F     QKG+ H    Y  ++DKL    +F+ +DA+L QM  E   F E +F+ +M
Sbjct: 94  SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIM 153

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           KH+    L  +   +   +  +   +P+ ++ +  L++L+  N   +  N   Y      
Sbjct: 154 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVF-YEMLSKG 212

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL------------- 244
           + P    F +++K  C    ++SA  +LK+M +     PN I Y TL             
Sbjct: 213 ISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHG-CVPNAIVYQTLIHALXKVGRVNEV 271

Query: 245 ----------------------IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
                                 I GLCK  R  EA +L + M+ +    P++ TY VL+ 
Sbjct: 272 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG-FTPNSFTYGVLMH 330

Query: 283 GFCRGGKVDRAKKIM--------------------------------EFMKNNGCNPNVF 310
           G CR GKVD A+ ++                                E M + GC P++F
Sbjct: 331 GLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF 390

Query: 311 NYTTLMNG-----------------------------------FCKEGKLQEAKEVFDEM 335
            Y TL+ G                                   FCKEG+L+EA+ V DEM
Sbjct: 391 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 450

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
               L  + +GY  LI+  C+  +V +AL +  +M  +GCK DI TFN ++ GLC+  K 
Sbjct: 451 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 510

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           EEALG+ + +  +G+  N  +Y  +++   ++G +++A++L+  ML RG      T N L
Sbjct: 511 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 570

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC+AG  E        ++  G  P + S  +L+  +CR   +  A E L +++
Sbjct: 571 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 626



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/334 (35%), Positives = 186/334 (55%), Gaps = 4/334 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +N  +   ++D A+  +  S   +   P+   +N LI   CK+G L SA E
Sbjct: 351 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 410

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++ EM+      PN+ITY+ LID  CK GR  EA  + +EM  K   L +A+ YN LI  
Sbjct: 411 LMNEMQIKGCE-PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL-NAVGYNCLISA 468

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  KV  A  +   M + GC P++F + +L+ G CK  K +EA  ++ +M    +  +
Sbjct: 469 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 528

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           TI Y TLI+ F R G + EAL+L+ +M  RGC  D +T+N ++  LCR G IE+ L + E
Sbjct: 529 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 588

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G+  N  S  I++N  C+ G ++ A+E LR M+ RG  P   T N L+  LCK G
Sbjct: 589 DMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 648

Query: 464 MAEDAAIALFGLVEM-GFKPESDSWALLVELICR 496
            A++ A+ LF  +++ G  P++ ++  L+   C+
Sbjct: 649 RAQE-ALNLFDKLQVEGICPDAITYNTLISWHCK 681



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 191/412 (46%), Gaps = 40/412 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  N+ TY  ++  L R  K +    +L ++          +F  L+  + +    + 
Sbjct: 316 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV----LFNTLINGYVSRGRLDE 371

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              + H+        P +   +T +  L +   +  A+  +    Q    +PN   + IL
Sbjct: 372 AKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN-EMQIKGCEPNVITYTIL 430

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSY--------------------------------- 235
           I   CK G LE A  VL EM    ++                                  
Sbjct: 431 IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 490

Query: 236 -PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            P++ T+++LI GLCK  +F EA+ L+++M+  + ++ + +TYN LI  F R G +  A 
Sbjct: 491 KPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYNTLIHAFLRRGAMQEAL 549

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           K++  M   GC  +   Y  L+   C+ G +++   +F++M +  L P+ I    LIN  
Sbjct: 550 KLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 609

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           CR G +  ALE L++M  RG   DIVT+N ++ GLC+ G+ +EAL + +KL  +GI  + 
Sbjct: 610 CRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 669

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
            +Y  ++++ C++G  + A  LL   +  GF+P+  T   L+    K G  E
Sbjct: 670 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 152/311 (48%), Gaps = 6/311 (1%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           ++ +LI      G  ++   +L +MK+  + +   + +  ++    + G   +A  L  +
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESL-FILIMKHYGRAGLPGQATRLLLD 171

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M       P   +YNV++D    G        +   M + G +P V+ +  +M   C   
Sbjct: 172 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 231

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++  A  +  +M      P+ I Y TLI+   + GRV+E L+LL+EM   GC  D+ TFN
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFN 291

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
             + GLC+  +I EA  +++++   G   N  +Y ++++  C+ G++++A    R++L +
Sbjct: 292 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNK 347

Query: 444 GFLPHYATSNELLVRLCKAGMAEDA-AIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
              P+    N L+      G  ++A A+    ++ +G  P+  ++  L+  +C+   L+ 
Sbjct: 348 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 407

Query: 503 AFELLDELVIK 513
           A EL++E+ IK
Sbjct: 408 ARELMNEMQIK 418


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 146/471 (30%), Positives = 242/471 (51%), Gaps = 16/471 (3%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
           K S+ I       LIK E++ Q A+ IF++ + +   GF H++ T++ ++ +L     F 
Sbjct: 8   KWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFR 67

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
             + +L +M  E C   E IFL++ + +         + +F K+     E PS K+  T 
Sbjct: 68  LAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECE-PSQKSYITV 126

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR-GTLESAFEVLKEMKKS 231
             +L+  NQ+ LA  F +Y  + + + P+    N+LIK  CK  GT+++A  + +EM  +
Sbjct: 127 FAILVGENQLKLALRFYRYMRE-MGIPPSVASLNVLIKALCKNSGTMDAALRIFREM-PN 184

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           +   P+  TY TLI+GLC+ G+  EA ELF+EM +K    P  +TY  LI G C+   +D
Sbjct: 185 RGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK-ACSPTVVTYTSLIHGLCQSKDLD 243

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A +++E M + G  PNVF Y++LM+G CK G    A E+ D M +    P+ I Y+TL+
Sbjct: 244 SAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLV 303

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +  C+ G++ EA+E+L  MK +G + D   +  I+ G C   K  EA   L+++   GI 
Sbjct: 304 HGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGIS 363

Query: 412 LNKASY-------RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            N+ ++        IV+   C +    +A +L   M  RG      T + L+   C  G 
Sbjct: 364 PNRLTWSLHVRIHNIVVQGLCTE-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGD 422

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD-ELVIKE 514
              AA  +  +V  G  P+  +W  +V      RK+  + EL+  EL+++ 
Sbjct: 423 LHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELMVEH 473


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/295 (37%), Positives = 174/295 (58%), Gaps = 2/295 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P    FN LI   CK G +E  F  LK + +S+   P++ T+S LI+GLCK GR  E 
Sbjct: 279 LRPTVVSFNTLISGCCKSGDVEEGFR-LKGVMESEGVCPDVFTFSALINGLCKEGRLDEG 337

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM  +  ++P+ +T+  LIDG C+GGKVD A K  + M   G  P++  Y  L+N
Sbjct: 338 SLLFDEMCGR-GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 396

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G L+EA+ + +EM    LKPD I +TTLI+  C+ G ++ ALE+ + M E G + 
Sbjct: 397 GLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIEL 456

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V F  ++ GLCREG++ +A  ML  +   G   +  +Y +V++  C+KG+++   +LL
Sbjct: 457 DDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLL 516

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + M   G +P   T N L+  LCK G  ++A + L  ++ +G  P   ++ +L++
Sbjct: 517 KEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLD 571



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 158/275 (57%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +  ++ L+ G CK G    A  +F+E + K  + P  +++N LI G C+ G V+   +
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDE-IPKRGLRPTVVSFNTLISGCCKSGDVEEGFR 304

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M++ G  P+VF ++ L+NG CKEG+L E   +FDEM    L P+ + +TTLI+  C
Sbjct: 305 LKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQC 364

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+VD AL+  + M  +G + D+VT+N ++ GLC+ G ++EA  ++ ++   G+  +K 
Sbjct: 365 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKI 424

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  +++  C+ G++E A+E+ R M+  G          L+  LC+ G   DA   L  +
Sbjct: 425 TFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDM 484

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  GFKP+  ++ ++++  C+   +   F+LL E+
Sbjct: 485 LSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEM 519



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 151/271 (55%), Gaps = 2/271 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F+ LI   CK G L+    +  EM    +  PN +T++TLIDG CK G+   A++
Sbjct: 316 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGL-VPNGVTFTTLIDGQCKGGKVDLALK 374

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F+ M+++  + PD +TYN LI+G C+ G +  A++++  M  +G  P+   +TTL++G 
Sbjct: 375 NFQMMLAQ-GVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGC 433

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+G ++ A E+   M    ++ D + +T LI+  CR GRV +A  +L +M   G K D 
Sbjct: 434 CKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDD 493

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+ +++   C++G ++    +L+++  DG      +Y  ++N  C++G+++ A  LL  
Sbjct: 494 PTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           ML  G  P+  T N LL    K G + D  I
Sbjct: 554 MLNVGVAPNDITYNILLDGHSKHGSSVDVDI 584



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 143/274 (52%), Gaps = 1/274 (0%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF-CRGGKVDRAKKIM 297
           + +  LI     +G   +A++ F  +      +P     N+L      R  +++R+  + 
Sbjct: 177 LVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALY 236

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             + ++G  P ++ +  LM+GFCK G +  A+ VFDE+    L+P  + + TLI+  C++
Sbjct: 237 LEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKS 296

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G V+E   L   M+  G   D+ TF+ ++ GLC+EG+++E   + +++   G+  N  ++
Sbjct: 297 GDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF 356

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++  C+ G+++ A++  ++ML +G  P   T N L+  LCK G  ++A   +  +  
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G KP+  ++  L++  C+   +  A E+   +V
Sbjct: 417 SGLKPDKITFTTLIDGCCKDGDMESALEIKRRMV 450


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 237/463 (51%), Gaps = 14/463 (3%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
           K  + I++   + LIK EK+   A+ +F++ + +   GF H++ T+  I+ +L    +F 
Sbjct: 8   KWPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFR 67

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
             + +L +M  E C   E IFL++ + +         + +FHK+    + +P+ KA  T 
Sbjct: 68  PAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGF-QLRPTQKAYLTI 126

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK-RGTLESAFEVLKEMKKS 231
           L++L+E N V  A  F +   + L +  +    NILIK  CK + T++SA  + +EM  +
Sbjct: 127 LDILVEENHVKRAIGFYR-EMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEM-PN 184

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           +   P+  TY TLI+GLC+ G   EA ELF+EM  K       +TY  LI G C+   +D
Sbjct: 185 RGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKG-FSASVVTYTSLIHGLCQSNNLD 243

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A  ++E MK N   PNVF Y++LM+G CK G   +A ++ + M      P+ + Y+TLI
Sbjct: 244 EAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLI 303

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+  ++ EA+E+L  M+ +G K +   +  I+ GLC  G  +EA   ++++   GI 
Sbjct: 304 NGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGIS 363

Query: 412 LNKASYRI-------VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            N+AS+ +       V+   C   +  +A +L   M  R       T + L+   CK G 
Sbjct: 364 PNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGD 423

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              AA  L  +V  G  P+   W +++  +   +K+  A E L
Sbjct: 424 LHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQL 466



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 10/279 (3%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG-GKVDR---AKK 295
           T+  +I  L    +FR A  + E M  +  ++ + +  ++     CRG G+V R   A +
Sbjct: 52  TFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSI-----CRGYGRVHRPLDAIR 106

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M+     P    Y T+++   +E  ++ A   + EM+   +    +    LI   C
Sbjct: 107 VFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALC 166

Query: 356 RAGR-VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           +    VD AL + +EM  RGC+ D  T+  ++ GLCR G I EA  + +++   G   + 
Sbjct: 167 KNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASV 226

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +++  CQ   L++AI LL  M      P+  T + L+  LCK G +  A   L  
Sbjct: 227 VTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEV 286

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           + +    P   +++ L+  +C+ RKL  A E+LD + I+
Sbjct: 287 MDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQ 325


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 225/419 (53%), Gaps = 5/419 (1%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           ++F +  +   F   ++T +++++  A    F +V+ +L ++  E     E  F+ + + 
Sbjct: 62  QMFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRA 121

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY---SNQHL 196
           +    L E+ +++FH++    R K S+K+ ++ LN++I          F  Y   SN ++
Sbjct: 122 YGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM 181

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + PN   FN++IK  CK G ++ A EV + M + +   P+  TY TL+DGLCK  R  E
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKK-CLPDGYTYCTLMDGLCKEERIDE 240

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L +EM S +   P  + YNVLIDG C+ G + R  K+++ M   GC PN   Y TL+
Sbjct: 241 AVLLLDEMQS-EGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLI 299

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G C +GKL +A  + + M +    P+ + Y TLIN   +  R  +   LL  M+ERG +
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYR 359

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +   +++++ GL +EGK EEA+ + +K+   G   N   Y  V++  C++G+  +A E+
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEI 419

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L  M+  G LP+  T + L+    K G++E+A      + E G       +++L++ +C
Sbjct: 420 LNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 219/467 (46%), Gaps = 69/467 (14%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F  + E+K    +  TY T++D L + ++ +    +L +M  E C     I+  L+
Sbjct: 206 AIEVFRGMPEKKCL-PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264

Query: 138 KHFSNCSLHERVLE----MFHK------------IHPITREKPSLKAIS----------- 170
                     RV +    MF K            IH +  +    KA+S           
Sbjct: 265 DGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324

Query: 171 -------TCLNLLIESNQ-VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
                  T +N L++  + +D A+  +    +  RL  N  I+++LI    K G  E A 
Sbjct: 325 PNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRL--NQHIYSVLISGLFKEGKAEEAM 382

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + K+M + +   PN++ YS +IDGLC+ G+  EA E+   M+S    LP+  TY+ L+ 
Sbjct: 383 TLWKKMAE-KGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSG-CLPNVYTYSSLMK 440

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GF + G  + A ++   M   GC+ N F Y+ L++G C  G+++EA  V+ +M    +KP
Sbjct: 441 GFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEM---KERGCKADIVTFNIILGGLCREGKIEEAL 399
           DT+ Y+++I   C  G +D AL+L  EM   +E   + D+VT+NI+L GLC +  +  A+
Sbjct: 501 DTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAV 560

Query: 400 GMLEKLWYDGIYLNKASYRIVLNF------SCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            +L  +   G   +  +    LN       SC++G              R FL       
Sbjct: 561 DLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEG--------------RSFL------E 600

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           EL+ RL K      A   +  ++     P++ +WA++V  IC+ +K+
Sbjct: 601 ELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKI 647



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 160/310 (51%), Gaps = 3/310 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F ++ + + K    E A ++   M        ++ +++++++ +   G +   +E ++ +
Sbjct: 115 FIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV 174

Query: 265 VSKD---QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           V+ +    I P+ L++N++I   C+ G VDRA ++   M    C P+ + Y TLM+G CK
Sbjct: 175 VNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCK 234

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           E ++ EA  + DEM++    P  + Y  LI+  C+ G +    +L+  M  +GC  + VT
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVT 294

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N ++ GLC +GK+++A+ +LE++       N  +Y  ++N   ++        LL  M 
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISME 354

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG+  +    + L+  L K G AE+A      + E G +P    ++ +++ +CR  K  
Sbjct: 355 ERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPN 414

Query: 502 FAFELLDELV 511
            A E+L+ ++
Sbjct: 415 EAKEILNGMI 424



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 144/337 (42%), Gaps = 58/337 (17%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E + + A+ ++  ++E KG   N   Y+ ++D L R  K      +L  M    C  +  
Sbjct: 375 EGKAEEAMTLWKKMAE-KGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVY 433

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            + +LMK F    L E  ++++                        E ++   ++N   Y
Sbjct: 434 TYSSLMKGFFKTGLSEEAIQVWR-----------------------EMDETGCSRNEFCY 470

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           S              +LI   C  G ++ A  V  +M    +  P+ + YS++I GLC  
Sbjct: 471 S--------------VLIDGLCGVGRVKEAMMVWSKMLTIGIK-PDTVAYSSMIKGLCGI 515

Query: 252 GRFREAIELFEEMVSKDQI--LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           G    A++L+ EM+ +++    PD +TYN+L+DG C    V RA  ++  M + GC+P+V
Sbjct: 516 GSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDV 575

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
               T +N       L E  +  +E ++FL          L+    +  RV  A ++++ 
Sbjct: 576 ITCNTFLN------TLSEKSDSCEEGRSFL--------EELVARLLKRQRVSGACKIVEV 621

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           M  +       T+ +I+  +C+  KI  A   + K W
Sbjct: 622 MLGKYLAPKTSTWAMIVPEICKPKKINAA---INKCW 655


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 241/537 (44%), Gaps = 107/537 (19%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ++E+F     QKG+ H    Y  ++DKL    +F+  DA+L QM  E   F E +F+ +M
Sbjct: 112 SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIM 171

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           KH+    L  +   +   +  +   +P+ ++ +  L++L+  N   +  N   Y      
Sbjct: 172 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVF-YEMLSKG 230

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL------------- 244
           + P    F +++K  C    ++SA  +LK+M +     PN I Y TL             
Sbjct: 231 ISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHG-CVPNAIVYQTLIHALSKVGRVNEV 289

Query: 245 ----------------------IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
                                 I GLCK  R  EA +L + M+ +    P++ TY VL+ 
Sbjct: 290 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG-FTPNSFTYGVLMH 348

Query: 283 GFCRGGKVDRAKKIM--------------------------------EFMKNNGCNPNVF 310
           G CR GKVD A+ ++                                E M + GC P++F
Sbjct: 349 GLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF 408

Query: 311 NYTTLMNG-----------------------------------FCKEGKLQEAKEVFDEM 335
            Y TL+ G                                   FCKEG+L+EA+ V DEM
Sbjct: 409 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 468

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
               L  + +GY  LI+  C+  +V +AL +  +M  +GCK DI TFN ++ GLC+  K 
Sbjct: 469 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 528

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           EEALG+ + +  +G+  N  +Y  +++   ++G +++A++L+  ML RG      T N L
Sbjct: 529 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 588

Query: 456 LVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC+AG  E   +ALF  ++  G  P + S  +L+  +CR   +  A E L +++
Sbjct: 589 IKALCRAGNIE-KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 644



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/334 (35%), Positives = 186/334 (55%), Gaps = 4/334 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +N  +   ++D A+  +  S   +   P+   +N LI   CK+G L SA E
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 428

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++ EM+      PN+ITY+ LID  CK GR  EA  + +EM  K   L +A+ YN LI  
Sbjct: 429 LMNEMQIKGCE-PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL-NAVGYNCLISA 486

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  KV  A  +   M + GC P++F + +L+ G CK  K +EA  ++ +M    +  +
Sbjct: 487 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 546

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           TI Y TLI+ F R G + EAL+L+ +M  RGC  D +T+N ++  LCR G IE+ L + E
Sbjct: 547 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 606

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G+  N  S  I++N  C+ G ++ A+E LR M+ RG  P   T N L+  LCK G
Sbjct: 607 DMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 666

Query: 464 MAEDAAIALFGLVEM-GFKPESDSWALLVELICR 496
            A++ A+ LF  +++ G  P++ ++  L+   C+
Sbjct: 667 RAQE-ALNLFDKLQVEGICPDAITYNTLISWHCK 699



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 191/412 (46%), Gaps = 40/412 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  N+ TY  ++  L R  K +    +L ++          +F  L+  + +    + 
Sbjct: 334 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV----LFNTLINGYVSRGRLDE 389

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              + H+        P +   +T +  L +   +  A+  +    Q    +PN   + IL
Sbjct: 390 AKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN-EMQIKGCEPNVITYTIL 448

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSY--------------------------------- 235
           I   CK G LE A  VL EM    ++                                  
Sbjct: 449 IDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 508

Query: 236 -PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            P++ T+++LI GLCK  +F EA+ L+++M+  + ++ + +TYN LI  F R G +  A 
Sbjct: 509 KPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYNTLIHAFLRRGAMQEAL 567

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           K++  M   GC  +   Y  L+   C+ G +++   +F++M +  L P+ I    LIN  
Sbjct: 568 KLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 627

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           CR G +  ALE L++M  RG   DIVT+N ++ GLC+ G+ +EAL + +KL  +GI  + 
Sbjct: 628 CRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 687

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
            +Y  ++++ C++G  + A  LL   +  GF+P+  T   L+    K G  E
Sbjct: 688 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 152/311 (48%), Gaps = 6/311 (1%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           ++ +LI      G  ++   +L +MK+  + +   + +  ++    + G   +A  L  +
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESL-FILIMKHYGRAGLPGQATRLLLD 189

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M       P   +YNV++D    G        +   M + G +P V+ +  +M   C   
Sbjct: 190 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 249

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++  A  +  +M      P+ I Y TLI+   + GRV+E L+LL+EM   GC  D+ TFN
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
             + GLC+  +I EA  +++++   G   N  +Y ++++  C+ G++++A    R++L +
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNK 365

Query: 444 GFLPHYATSNELLVRLCKAGMAEDA-AIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
              P+    N L+      G  ++A A+    ++ +G  P+  ++  L+  +C+   L+ 
Sbjct: 366 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 425

Query: 503 AFELLDELVIK 513
           A EL++E+ IK
Sbjct: 426 ARELMNEMQIK 436


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/379 (34%), Positives = 200/379 (52%), Gaps = 8/379 (2%)

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY-SNQHLRL 198
           +S   L     ++ H +    R +PSL+A +  L+ L  S       +   + S   LRL
Sbjct: 141 YSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRL 200

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            PN   FN+L+  HC +GTL  A   L  M+   +S P+ +TY+TL++  C+ G   EA 
Sbjct: 201 HPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLS-PDAVTYNTLLNAHCRKGMLGEAR 259

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L   M  KD + P   TYN L+  + R G + +A K++E M  NG  P+++ Y  L  G
Sbjct: 260 ALLARM-KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAG 318

Query: 319 FCKEGKLQEAKEVFDEMKNF-LLKPDTIGYTTLIN-CF-CRAGRVDEALELLKEMKERGC 375
            C+ GK+ EA  + DEM+    L PD + Y TL + CF CR     +AL LL+EM+E+G 
Sbjct: 319 LCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCS--SDALRLLEEMREKGV 376

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           KA +VT NI++ GLC++G++E ALG L K+  DG+  +  +Y  +++  C+ G + KA  
Sbjct: 377 KATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYT 436

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+  M+ RG      T N +L  LCK    E+A   L    + GF P+  S+  ++    
Sbjct: 437 LMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYF 496

Query: 496 RGRKLLFAFELLDELVIKE 514
           +      A  L DE++ K+
Sbjct: 497 KEYNSEPALRLWDEMIEKK 515



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 169/352 (48%), Gaps = 34/352 (9%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-----SQMSY------------- 235
           Q   L P+   +N L+  HC++G L  A  +L  MKK     ++ +Y             
Sbjct: 231 QGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWI 290

Query: 236 ----------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
                           P+L TY+ L  GLC+ G+  EA  L +EM     +LPD +TYN 
Sbjct: 291 KQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNT 350

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L D   +      A +++E M+  G    +  +  ++ G CK+G+L+ A    ++M +  
Sbjct: 351 LADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDG 410

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L PD I Y TLI+  C+AG + +A  L+ EM  RG K D  T N +L  LC+E + EEA 
Sbjct: 411 LAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQ 470

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
           G+L+     G   ++ SY  V+    ++   E A+ L   M+ +   P  +T N L+  L
Sbjct: 471 GLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGL 530

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + G  ++A   L  L+E G  P+  ++ +++   C+   L  AF+  +++V
Sbjct: 531 SRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 197/420 (46%), Gaps = 7/420 (1%)

Query: 80  EIFNTVSEQKGF--NHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           +  +T+S  +GF  + +  TY T+L+   R        A+L +M  +        +  L+
Sbjct: 222 DALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLV 281

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             ++     ++  ++   +     E P L   +     L ++ +VD A        +   
Sbjct: 282 SAYARLGWIKQATKVVEAMTANGFE-PDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGT 340

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N L     K      A  +L+EM++  +    L+T++ +I GLCK+G    A
Sbjct: 341 LLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKA-TLVTHNIVIKGLCKDGELEGA 399

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +    +M + D + PD +TYN LI   C+ G + +A  +M+ M   G   + F   T++ 
Sbjct: 400 LGCLNKM-ADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLY 458

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CKE + +EA+ +          PD + Y T++  + +    + AL L  EM E+    
Sbjct: 459 NLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            I T+N ++ GL R G+++EA+  L +L   G+  +  +Y I+++  C++G+LE A +  
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFH 578

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICR 496
             M+   F P   T N L+  LC  G   D A+ LF   VE G K +  ++  L++ +C+
Sbjct: 579 NKMVENSFKPDVVTCNTLMNGLCLNGKL-DKALKLFESWVEKGKKVDVITYNTLIQTMCK 637



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 166/336 (49%), Gaps = 4/336 (1%)

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           ++T L  L +  + + AQ  L+   Q     P+   +  ++  + K    E A  +  EM
Sbjct: 453 LNTVLYNLCKEKRYEEAQGLLQSPPQR-GFMPDEVSYGTVMAAYFKEYNSEPALRLWDEM 511

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
            + +++ P++ TY+TLI GL + GR +EAI+   E++ K  ++PD  TYN++I  +C+ G
Sbjct: 512 IEKKLT-PSISTYNTLIKGLSRMGRLKEAIDKLNELMEKG-LVPDDTTYNIIIHAYCKEG 569

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            ++ A +    M  N   P+V    TLMNG C  GKL +A ++F+       K D I Y 
Sbjct: 570 DLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYN 629

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           TLI   C+ G VD AL    +M+ RG + D  T+N++L  L   G+ EEA  ML KL   
Sbjct: 630 TLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAES 689

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G      S  ++   S  + E  K  +     +            +L+  LC +G  ++A
Sbjct: 690 GTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEA 749

Query: 469 AIALFGLVEMGFKPESDSWALLVE-LICRGRKLLFA 503
              L  +++ G   +S ++  L+E L+ R ++L  A
Sbjct: 750 KAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLTHA 785



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 163/323 (50%), Gaps = 6/323 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K      NI+IK  CK G LE A   L +M    ++ P++ITY+TLI   CK G   +A
Sbjct: 376 VKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLA-PDVITYNTLIHAHCKAGNIAKA 434

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EMV +   L D  T N ++   C+  + + A+ +++     G  P+  +Y T+M 
Sbjct: 435 YTLMDEMVRRGLKL-DTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMA 493

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            + KE   + A  ++DEM    L P    Y TLI    R GR+ EA++ L E+ E+G   
Sbjct: 494 AYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVP 553

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+NII+   C+EG +E A     K+  +    +  +   ++N  C  G+L+KA++L 
Sbjct: 554 DDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLF 613

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICR 496
              + +G      T N L+  +CK G   D A+  F  +E  G +P++ ++ +++  +  
Sbjct: 614 ESWVEKGKKVDVITYNTLIQTMCKDGDV-DTALHFFADMEARGLQPDAFTYNVVLSALSE 672

Query: 497 GRKLLFAFELLDELVIKESGTIQ 519
             +   A  +L +L   ESGT+ 
Sbjct: 673 AGRTEEAQNMLHKLA--ESGTLS 693



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 148/293 (50%), Gaps = 2/293 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N LI  HCK G +  A+ ++ EM +  +   +  T +T++  LCK  R+ EA
Sbjct: 411 LAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKL-DTFTLNTVLYNLCKEKRYEEA 469

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +    +   +PD ++Y  ++  + +    + A ++ + M      P++  Y TL+ 
Sbjct: 470 QGLLQSPPQRG-FMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIK 528

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  + G+L+EA +  +E+    L PD   Y  +I+ +C+ G ++ A +   +M E   K 
Sbjct: 529 GLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKP 588

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT N ++ GLC  GK+++AL + E     G  ++  +Y  ++   C+ G+++ A+   
Sbjct: 589 DVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFF 648

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             M  RG  P   T N +L  L +AG  E+A   L  L E G   +S S  LL
Sbjct: 649 ADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLL 701



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 154/315 (48%), Gaps = 4/315 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF--REA 257
           P+T + +  +  + +      A ++L  +++     P+L   + ++  L ++     + +
Sbjct: 129 PSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQAS 188

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++ F  +V+  ++ P+  T+N+L+   C  G +  A   +  M+  G +P+   Y TL+N
Sbjct: 189 LDAFRSIVAL-RLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLN 247

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C++G L EA+ +   MK   + P    Y TL++ + R G + +A ++++ M   G + 
Sbjct: 248 AHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEP 307

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK-AIEL 436
           D+ T+N++  GLC+ GK++EA  + +++   G  L        L  +C K      A+ L
Sbjct: 308 DLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRL 367

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M  +G      T N ++  LCK G  E A   L  + + G  P+  ++  L+   C+
Sbjct: 368 LEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCK 427

Query: 497 GRKLLFAFELLDELV 511
              +  A+ L+DE+V
Sbjct: 428 AGNIAKAYTLMDEMV 442


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 177/302 (58%), Gaps = 2/302 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P T  FN LI   CK   L+  F + K M+++++ YP++ TYS LI GLCK GR   A
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRI-YPDVFTYSVLIHGLCKEGRLDVA 312

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF+EM  +  + P+ +T+  LIDG CR  ++D A      M   G  P++  Y TL+N
Sbjct: 313 EQLFDEMQQRG-LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLN 371

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G + +A+++ DEM+   +KPD I YTTLI+ +C+ G ++ A+E+ K M E G   
Sbjct: 372 GLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V F  ++ G CR+G++ +A   L ++   G+  + A+Y +V++  C+KG ++   +LL
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M   G  P   T N L+  LCK G  ++A + L  ++ +G  P+  ++ +L+E  C+ 
Sbjct: 492 KEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKN 551

Query: 498 RK 499
            K
Sbjct: 552 GK 553



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 180/306 (58%), Gaps = 5/306 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +P+  + +T +N L +S  +D  + F LK + +  R+ P+   +++LI   CK G L+ A
Sbjct: 255 RPTTVSFNTLINGLCKSRNLD--EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++  EM++  +  PN IT++ LIDG C++ R   A+  + +M++   + PD + YN L+
Sbjct: 313 EQLFDEMQQRGLR-PNGITFTALIDGQCRSRRIDSAMNTYHQMLTMG-VKPDLVMYNTLL 370

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           +G C+ G V++A+K+++ M+  G  P+   YTTL++G+CKEG L+ A E+   M    + 
Sbjct: 371 NGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + +T LI+ FCR GRV +A   L+EM E G K D  T+ +++ G C++G ++    +
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L+++  +G      +Y +++N  C++G+++ A  LL  ML  G  P   T N LL   CK
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK 550

Query: 462 AGMAED 467
            G AED
Sbjct: 551 NGKAED 556



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 160/277 (57%), Gaps = 1/277 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +  Y+ LI+  CK G  R+A  +F E + K  + P  +++N LI+G C+   +D   +
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNE-IRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M+ N   P+VF Y+ L++G CKEG+L  A+++FDEM+   L+P+ I +T LI+  C
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQC 339

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R+ R+D A+    +M   G K D+V +N +L GLC+ G + +A  +++++   G+  +K 
Sbjct: 340 RSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKI 399

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++G+LE A+E+ + M   G +        L+   C+ G   DA   L  +
Sbjct: 400 TYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM 459

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           VE G KP+  ++ ++++  C+   +   F+LL E+ I
Sbjct: 460 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 110/203 (54%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P V  Y  L+N FCKEG +++AK +F+E++   L+P T+ + TLIN  C++  +DE 
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             L K M+E     D+ T+++++ GLC+EG+++ A  + +++   G+  N  ++  +++ 
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+   ++ A+     ML  G  P     N LL  LCK G    A   +  +  +G KP+
Sbjct: 338 QCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPD 397

Query: 484 SDSWALLVELICRGRKLLFAFEL 506
             ++  L++  C+   L  A E+
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEI 420



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 93/179 (51%)

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           + E+  +   P    Y  LIN FC+ G + +A  +  E+++RG +   V+FN ++ GLC+
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
              ++E   + + +  + IY +  +Y ++++  C++G L+ A +L   M  RG  P+  T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              L+   C++   + A      ++ MG KP+   +  L+  +C+   +  A +L+DE+
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 9/159 (5%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E + + A+EI   ++E+ G   +N  +  ++    R  +    +  LR+M     K  + 
Sbjct: 411 EGDLESAMEIRKGMNEE-GVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDA 469

Query: 132 IFLNLMKHF---SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            +  ++  +    N  +  ++L+       I   KP +   +  +N L +  Q+  A N 
Sbjct: 470 TYTMVIDGYCKKGNVKMGFKLLKEMQ----INGHKPGVITYNVLMNGLCKQGQMKNA-NM 524

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           L  +  +L + P+   +NIL++ HCK G  E   ++  E
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 240/447 (53%), Gaps = 5/447 (1%)

Query: 65  AISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
            + L+K EK P+ A  +F++ +   G+ H+   Y  IL +L+  +    V  ++  +  +
Sbjct: 13  VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72

Query: 125 TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
            CK  E + L+++K +   S+ ++ L++F ++  I   +P++++ +T LN  +E+ Q   
Sbjct: 73  ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
            ++   Y  +   + PN   +N+LIK  CK+   E A   L  M K     P++ +YST+
Sbjct: 133 VESLFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK-PDVFSYSTV 190

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME-FMKNN 303
           I+ L K G+  +A+ELF+EM S+  + PD   YN+LIDGF +      A ++ +  ++++
Sbjct: 191 INDLAKAGKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
              PNV  +  +++G  K G++ +  ++++ MK    + D   Y++LI+  C AG VD+A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             +  E+ ER    D+VT+N +LGG CR GKI+E+L +   + +    +N  SY I++  
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKG 368

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             + G++++A  + RLM  +G+     T    +  LC  G    A   +  +   G   +
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
             ++A +++ +C+ ++L  A  L+ E+
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEM 455



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 228/473 (48%), Gaps = 52/473 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKK----FEAVDAVLRQMT-YETCKFHEGI 132
           ALE+F+ +SE +G   +   Y  ++D   + K      E  D +L   + Y   K H   
Sbjct: 203 ALELFDEMSE-RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTH--- 258

Query: 133 FLNLM-KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
             N+M    S C   +  L+++ ++    REK  L   S+ ++ L ++  VD A++    
Sbjct: 259 --NIMISGLSKCGRVDDCLKIWERMKQNEREK-DLYTYSSLIHGLCDAGNVDKAESVFNE 315

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            ++  +   +   +N ++   C+ G ++ + E+ + M+    +  N+++Y+ LI GL +N
Sbjct: 316 LDER-KASIDVVTYNTMLGGFCRCGKIKESLELWRIME--HKNSVNIVSYNILIKGLLEN 372

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+  EA  ++  M +K     D  TY + I G C  G V++A  +M+ ++++G + +V+ 
Sbjct: 373 GKIDEATMIWRLMPAKGYA-ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYA 431

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMK---------------------------NFLLK--- 341
           Y ++++  CK+ +L+EA  +  EM                            +F L+   
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491

Query: 342 -----PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
                P  + Y  LI   C+AG+  EA   +KEM E G K D+ T++I+L GLCR+ KI+
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            AL +  +    G+  +   + I+++  C  G+L+ A+ ++  M  R    +  T N L+
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
               K G +  A +    + +MG +P+  S+  +++ +C  R + +A E  D+
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDD 664



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 190/441 (43%), Gaps = 58/441 (13%)

Query: 61  SHGAAIS-LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +H   IS L KC +   C L+I+  + +Q     +  TY++++  L      +  ++V  
Sbjct: 257 THNIMISGLSKCGRVDDC-LKIWERM-KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLI 177
           ++           +  ++  F  C   +  LE++     I   K S+  +S    +  L+
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR----IMEHKNSVNIVSYNILIKGLL 370

Query: 178 ESNQVDLAQNFLKYSNQHLRLKP------NTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
           E+ ++D A           RL P      +   + I I   C  G +  A  V++E++ S
Sbjct: 371 ENGKIDEATMIW-------RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEM--------------------------- 264
              + ++  Y+++ID LCK  R  EA  L +EM                           
Sbjct: 424 G-GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482

Query: 265 -------VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
                  + K+   P  ++YN+LI G C+ GK   A   ++ M  NG  P++  Y+ L+ 
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C++ K+  A E++ +     L+ D + +  LI+  C  G++D+A+ ++  M+ R C A
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++VT+N ++ G  + G    A  +   ++  G+  +  SY  ++   C    +  A+E  
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662

Query: 438 RLMLCRGFLPHYATSNELLVR 458
                 G  P   T N +LVR
Sbjct: 663 DDARNHGIFPTVYTWN-ILVR 682


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 242/492 (49%), Gaps = 69/492 (14%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    I L+K EK P  AL IF++V+   G++H    +  IL +L   K          
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPK---------- 57

Query: 120 QMTYETCKFHEGIFLNLMKH-FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
                           L+ H ++  S+ ++ L++F ++H I   +P +++ ++ LN LIE
Sbjct: 58  ----------------LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIE 101

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           SN+ D A++F  Y  + + L PN   +NILIK  C++   + A E+L  M     S P++
Sbjct: 102 SNKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFS-PDV 159

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF-------------- 284
            +Y TLI+ L KNG   +A++LF+EM  +  + PD   YN+LIDGF              
Sbjct: 160 FSYGTLINSLAKNGYMSDALKLFDEMPERG-VTPDVACYNILIDGFFKKGDILNASEIWE 218

Query: 285 ----------------------CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
                                 C+ GK D + +I   MK N    +++ Y+TL++G C  
Sbjct: 219 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 278

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G L  A  V+ EM    + PD + Y T++N + RAGR++E LEL K M++ GC+  +V++
Sbjct: 279 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSY 337

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLML 441
           NI++ GL    K++EA+ + E L       +  +Y ++++  C+ G L KA+ +L     
Sbjct: 338 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 397

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG L  +A S+ ++  LC+ G  ++ A  L  + + G KP       ++    R  KL 
Sbjct: 398 GRGDLDTFAYSS-MINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLE 456

Query: 502 FAFELLDELVIK 513
            A      +V K
Sbjct: 457 DALRFFGNMVSK 468



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 214/474 (45%), Gaps = 55/474 (11%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E F    E  G + N  TY  ++    R K+F+    +L  M  +        +  L+  
Sbjct: 109 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINS 168

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--------NQVDLAQNFLKY 191
            +        L++F ++ P     P +     C N+LI+         N  ++ +  LK 
Sbjct: 169 LAKNGYMSDALKLFDEM-PERGVTPDV----ACYNILIDGFFKKGDILNASEIWERLLKG 223

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            + +    PN   +N++I   CK G  + +FE+   MKK++    +L TYSTLI GLC +
Sbjct: 224 PSVY----PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG-QDLYTYSTLIHGLCGS 278

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG----------------------- 288
           G    A  +++EM +++ + PD + YN +++G+ R G                       
Sbjct: 279 GNLDGATRVYKEM-AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 337

Query: 289 -----------KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
                      KVD A  I E +    C  +   Y  L++G CK G L +A  + +E +N
Sbjct: 338 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 397

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
                DT  Y+++IN  CR GR+DE   +L +M + GCK +    N ++ G  R  K+E+
Sbjct: 398 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLED 457

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL     +   G +    +Y  ++N   +     +A  L++ ML +G+ P+  T + L+ 
Sbjct: 458 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMN 517

Query: 458 RLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LC+ G   D A+ L+   +E GFKP+     +++  +C   K+  A +L  E+
Sbjct: 518 GLCQ-GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 209/414 (50%), Gaps = 17/414 (4%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           S+G  I+ +        AL++F+ + E +G   + A Y  ++D    +KK + ++A    
Sbjct: 161 SYGTLINSLAKNGYMSDALKLFDEMPE-RGVTPDVACYNILIDGF--FKKGDILNA---S 214

Query: 121 MTYETCKFHEGIFLN------LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
             +E       ++ N      ++     C   +   E++H++    R +  L   ST ++
Sbjct: 215 EIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIH 273

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
            L  S  +D A    K   ++  + P+  ++N ++  + + G +E   E+ K M+K    
Sbjct: 274 GLCGSGNLDGATRVYKEMAEN-GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR 332

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
              +++Y+ LI GL +N +  EAI ++E +  KD    D++TY VL+ G C+ G +++A 
Sbjct: 333 --TVVSYNILIRGLFENAKVDEAISIWELLPEKD-CCADSMTYGVLVHGLCKNGYLNKAL 389

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            I+E  +N   + + F Y++++NG C+EG+L E   V D+M     KP+      +IN F
Sbjct: 390 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGF 449

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
            RA ++++AL     M  +GC   +VT+N ++ GL +  +  EA  +++++   G   N 
Sbjct: 450 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNM 509

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            +Y +++N  CQ  +L+ A+ L    L +GF P     N ++  LC +G  EDA
Sbjct: 510 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 563



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 2/292 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           ++  + +L+   CK G L  A  +L+E +  +    +   YS++I+GLC+ GR  E   +
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-DTFAYSSMINGLCREGRLDEVAGV 426

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M +K    P+    N +I+GF R  K++ A +    M + GC P V  Y TL+NG  
Sbjct: 427 LDQM-TKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 485

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  +  EA  +  EM     KP+ I Y+ L+N  C+  ++D AL L  +  E+G K D+ 
Sbjct: 486 KAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVK 545

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
             NII+ GLC  GK+E+AL +  ++       N  ++  ++    +  + E+A ++   +
Sbjct: 546 MHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 605

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           L  G  P   + N  L  LC      DA   L   V+ G  P + +W +LV+
Sbjct: 606 LQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQ 657



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 140/320 (43%), Gaps = 41/320 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL I       +G + +   Y+++++ L R  + + V  VL QMT   CK +  +   ++
Sbjct: 388 ALSILEEAENGRG-DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVI 446

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F   S  E  L  F  +               C                         
Sbjct: 447 NGFVRASKLEDALRFFGNM-----------VSKGCF------------------------ 471

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P    +N LI    K      A+ ++KEM +     PN+ITYS L++GLC+  +   A
Sbjct: 472 --PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWK-PNMITYSLLMNGLCQGKKLDMA 528

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L+ + + K    PD   +N++I G C  GKV+ A ++   MK   C PN+  + TLM 
Sbjct: 529 LNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLME 587

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF K    + A +++D +  + L+PD I Y   +   C   R+ +A+  L +  +RG   
Sbjct: 588 GFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 647

Query: 378 DIVTFNIILGG-LCREGKIE 396
             +T+NI++ G L  +G +E
Sbjct: 648 TAITWNILVQGYLALKGYME 667


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/314 (36%), Positives = 179/314 (57%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI  +CK G ++ AF +LK M    M  PNLI+Y+ +I+GLC+ G  +EA E
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQ-PNLISYNVIINGLCREGSMKEAWE 305

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + EEM  K    PD +TYN L++G+C+ G   +A  I   M  NG +P+V  YT L+N  
Sbjct: 306 ILEEMGYKG-FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 364

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK   L  A E FD+M+   L+P+   YTTLI+ F R G ++EA  +L EM E G    +
Sbjct: 365 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N  + G C   ++EEALG+++++   G+  +  SY  +++  C+KGEL++A ++ + 
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 484

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P   T + L+  LC+     +A      +++MG  P+  ++  L+   C    
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544

Query: 500 LLFAFELLDELVIK 513
           L  A  L DE++ K
Sbjct: 545 LNKALHLHDEMIHK 558



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 230/442 (52%), Gaps = 12/442 (2%)

Query: 80  EIFNTV--SEQKGFNHNNATYATILDKLARYKKFEAVDA--VLRQMTYETCKFHEGIFLN 135
           +  NT+  ++  GF     +Y ++LD + R +    + A  V R+M       +   +  
Sbjct: 160 QAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNI 219

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           L++ F +    ++ L  F ++    R    P++   +T ++   +  ++D A   LK S 
Sbjct: 220 LIRGFCSVGELQKGLGCFGEME---RNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK-SM 275

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
               ++PN   +N++I   C+ G+++ A+E+L+EM     + P+ +TY+TL++G CK G 
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT-PDEVTYNTLLNGYCKEGN 334

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F +A+ +  EMV ++ + P  +TY  LI+  C+   ++RA +  + M+  G  PN   YT
Sbjct: 335 FHQALVIHAEMV-RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 393

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL++GF ++G L EA  + +EM      P  + Y   I+  C   R++EAL +++EM E+
Sbjct: 394 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 453

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   D+V+++ I+ G CR+G+++ A  M +++   G+  +  +Y  ++   C+   L +A
Sbjct: 454 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 513

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            +L + ML  G  P   T   L+   C  G    A      ++  GF P++ ++++L+  
Sbjct: 514 CDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 573

Query: 494 ICRGRKLLFAFELLDELVIKES 515
           + +  +   A  LL +L+ +ES
Sbjct: 574 LNKQARTREAKRLLFKLIYEES 595



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 188/350 (53%), Gaps = 9/350 (2%)

Query: 170 STCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK-RGTLE-SAFE 223
           S   +L+++S    N +D A N +  +       P    +N ++    + RG+++ SA E
Sbjct: 142 SAVFDLMVKSYSHLNMIDQAVNTINLAKSS-GFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V +EM +S++S PN+ TY+ LI G C  G  ++ +  F EM  ++  LP+ +TYN LID 
Sbjct: 201 VYREMIRSRVS-PNVYTYNILIRGFCSVGELQKGLGCFGEM-ERNGCLPNVVTYNTLIDA 258

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+ G++D A  +++ M + G  PN+ +Y  ++NG C+EG ++EA E+ +EM      PD
Sbjct: 259 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 318

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y TL+N +C+ G   +AL +  EM   G    +VT+  ++  +C+   +  A+   +
Sbjct: 319 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 378

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  N+ +Y  +++   ++G L +A  +L  M   GF P   T N  +   C   
Sbjct: 379 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 438

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             E+A   +  +VE G  P+  S++ ++   CR  +L  AF++  E+V K
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 488



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 210/426 (49%), Gaps = 28/426 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-SNCSLH 146
            KG   N  +Y  I++ L R    +    +L +M Y+     E  +  L+  +    + H
Sbjct: 277 SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 336

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIF 205
           + ++   H         PS+   +  +N + ++  ++ A  F  +    +R L+PN   +
Sbjct: 337 QALV--IHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF--FDQMRIRGLRPNERTY 392

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI    ++G L  A+ +L EM +S  S P+++TY+  I G C   R  EA+ + +EMV
Sbjct: 393 TTLIDGFSRQGLLNEAYRILNEMTESGFS-PSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K  + PD ++Y+ +I GFCR G++DRA ++ + M   G +P+   Y++L+ G C+  +L
Sbjct: 452 EKG-LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 510

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA ++  EM +  L PD   YTTLIN +C  G +++AL L  EM  +G   D VT++++
Sbjct: 511 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 570

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GL ++ +  EA  +L KL Y+    +  +Y  ++  +C   E +  + L++     GF
Sbjct: 571 INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE-NCSNIEFKSVVALIK-----GF 624

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
                         C  G+  +A      +VE   KP    + +++   CRG  L  AF 
Sbjct: 625 --------------CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670

Query: 506 LLDELV 511
           L  E++
Sbjct: 671 LYKEMI 676



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 181/392 (46%), Gaps = 32/392 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E F+ +   +G   N  TY T++D  +R         +L +MT E+      +  N  
Sbjct: 373 AMEFFDQM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT-ESGFSPSVVTYNAF 430

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
            H  +C L ER+ E    +  +  +   P + + ST ++      ++D A   +K     
Sbjct: 431 IH-GHCVL-ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ-MKQEMVE 487

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             + P+   ++ LI+  C+   L  A ++ +EM    +  P+  TY+TLI+  C  G   
Sbjct: 488 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP-PDEFTYTTLINAYCVEGDLN 546

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ L +EM+ K   LPDA+TY+VLI+G  +  +   AK+++  +      P+   Y TL
Sbjct: 547 KALHLHDEMIHKG-FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 605

Query: 316 M---------------NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           +                GFC +G + EA  VF+ M     KP    Y  +I+  CR G +
Sbjct: 606 IENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNL 665

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI---YLNKASY 417
            +A  L KEM   G     VT   ++  L +EG  EE    + ++  D +    LN+A  
Sbjct: 666 PKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE----MSEVIGDTLRSCRLNEAEL 721

Query: 418 -RIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            ++++  + ++G +E  + +L  M   G LP+
Sbjct: 722 AKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 236/463 (50%), Gaps = 15/463 (3%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
           K S+ I       LIK E++ Q A+ IF++ + +   GF H++ T++ ++ +L     F 
Sbjct: 8   KWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFR 67

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
             + +L +M  E C   E IFL++ + +         + +F K+     E PS K+  T 
Sbjct: 68  LAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECE-PSQKSYITV 126

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR-GTLESAFEVLKEMKKS 231
             +L+  NQ+ LA  F +Y  + + + P+    N+LIK  CK  GT+++A  + +EM  +
Sbjct: 127 FAILVGENQLKLALRFYRYMRE-MGIPPSVASLNVLIKALCKNSGTMDAALRIFREM-PN 184

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           +   P+  TY TLI GLC+ G+  EA ELF+EM +K    P  +TY  LI G C+   +D
Sbjct: 185 RGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETK-ACSPTVVTYXSLIHGLCQSKDLD 243

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A +++E M + G  PNVF Y++LM+G CK G    A E+ D M +    P+ I Y+TL+
Sbjct: 244 SAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLV 303

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +  C+ G++ EA+E+L  MK +G + D   +  I+ G C   K  EA   L+++   GI 
Sbjct: 304 HGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGIS 363

Query: 412 LNKASY-------RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            N+ ++        IV+   C +    +A +L   M  RG      T + L+   C  G 
Sbjct: 364 PNRLTWSLHVRIHNIVVQGLCTE-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGD 422

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              AA  +  +V  G  P+  +W  +V      RK+  + EL+
Sbjct: 423 LHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELV 465



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 166/362 (45%), Gaps = 17/362 (4%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYK-KFEAVDAVLR 119
           S+    +++  E + + AL  +  + E  G   + A+   ++  L +     +A   + R
Sbjct: 122 SYITVFAILVGENQLKLALRFYRYMREM-GIPPSVASLNVLIKALCKNSGTMDAALRIFR 180

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIE 178
           +M    C  H   +  L+             E+F ++   T+   P++    + ++ L +
Sbjct: 181 EMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEME--TKACSPTVVTYXSLIHGLCQ 238

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           S  +D A   L+       +KPN   ++ L+  HCK G    A E+L +M  S+   PN+
Sbjct: 239 SKDLDSAIRLLEEMASK-GIKPNVFTYSSLMDGHCKSGCSSRALELL-DMMVSRRHLPNM 296

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           ITYSTL+ GLCK G+ +EA+E+ + M     + PDA  Y  +I GFC   K   A   ++
Sbjct: 297 ITYSTLVHGLCKEGKLQEAVEILDRM-KLQGLRPDAGLYGKIISGFCDICKFHEAANFLD 355

Query: 299 FMKNNGCNPNVFNYT-------TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            M   G +PN   ++        ++ G C E     A +++  M+   +  D   + +L+
Sbjct: 356 EMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLV 414

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N FC  G + +A  L+ EM   GC  D  T+N ++       K+ E+  +++ +   G +
Sbjct: 415 NYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQ-VELMGTF 473

Query: 412 LN 413
           LN
Sbjct: 474 LN 475



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 10/279 (3%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG-GKVDR---AKK 295
           T+S +I  L     FR A EL   M  +   + + +  ++     CR  G+V +   A +
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSI-----CRAYGRVHKPLDAVR 106

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   MK   C P+  +Y T+      E +L+ A   +  M+   + P       LI   C
Sbjct: 107 VFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALC 166

Query: 356 R-AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           + +G +D AL + +EM  RGC     T+  ++ GLCR GKI EA  + +++         
Sbjct: 167 KNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTV 226

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +++  CQ  +L+ AI LL  M  +G  P+  T + L+   CK+G +  A   L  
Sbjct: 227 VTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDM 286

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +V     P   +++ LV  +C+  KL  A E+LD + ++
Sbjct: 287 MVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325


>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 394

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 227/401 (56%), Gaps = 11/401 (2%)

Query: 114 VDAVLRQMTYETCKF--HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST 171
           ++ +L+Q+  ET +F  HE IF N++  +    L +R  ++F +I P  R K ++K++++
Sbjct: 1   MEEILQQLKQET-RFAPHEVIFCNVIAFYGRAHLPDRAFQVFERI-PSFRCKRTVKSVNS 58

Query: 172 CLNLLIESNQVD-LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
            L  L+++ Q++ + Q F+  SN      P+ C FNILI   C  G L++ + V  EM+K
Sbjct: 59  LLAALLKNRQLEKMTQVFVDISNYG---SPDACTFNILIHAACLCGDLDAVWGVFDEMQK 115

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             +  PN++T+ TLI GL  N + +EA+ L E+MV    I P+A  Y  LI GFC  G++
Sbjct: 116 RGVK-PNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGEL 174

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           + A K+ E M  +        Y+TL++   K G+ +E  ++  EM     KPDT+ Y  +
Sbjct: 175 NFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAI 234

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           IN  C+   ++ A  ++ EM E+GCK D+ +FN I+G LC+EGK+++A+ +LE +   G 
Sbjct: 235 INGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGC 294

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  SYRI+ +  C+  +L++A  +L  M+ +G++P   + N+L+ RLC+    E   +
Sbjct: 295 PPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWM 354

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L  L   G +   D WA +V  + +   L  +  L+D L+
Sbjct: 355 ILNSLGR-GNRMNMDMWARVVAFVYK-ENLSESSNLIDSLI 393



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 39/192 (20%)

Query: 95  NATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
           +A Y+T++  L ++ + E V  +LR+M    CK     +  ++    N    E  LE  H
Sbjct: 193 SAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAII----NGHCKENDLESAH 248

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
           ++     EK                                   KP+   FN +I   CK
Sbjct: 249 RVMDEMVEKGC---------------------------------KPDVFSFNTIIGWLCK 275

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
            G L+ A ++L++M +     P++++Y  + DGLC+  + +EA  + +EM+ K  + P  
Sbjct: 276 EGKLDKAMDLLEDMPRRGCP-PDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYV-PRN 333

Query: 275 LTYNVLIDGFCR 286
            + N L+D  C+
Sbjct: 334 ESINKLVDRLCQ 345


>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 610

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 224/412 (54%), Gaps = 8/412 (1%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIF---NTVSEQKGFNHNNATYATILDKLARYKKFE 112
           + + IS     SL++ +++P+ AL +F   N+    K F ++   Y  ++ KL R K F 
Sbjct: 5   KPKRISSFRLASLLRLQEDPKLALHLFQHPNSNPNPKPFRYSLLCYDLMITKLGRAKMFH 64

Query: 113 AVDAVLRQMTYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST 171
            ++ +L Q   +T     E +F N++  +    L +  L+MF ++ P+ R + ++K+ +T
Sbjct: 65  EMEQILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEM-PLYRCQRTIKSYNT 123

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
            LN+L+   + D+ +       +H+  KP+ C FNI+I+  C  G ++ A +VL EMK  
Sbjct: 124 LLNVLMICKEFDVMREHFVNIKRHV--KPDGCTFNIMIRGLCSDGRVDDALKVLDEMKNR 181

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  PN +T+ TLI GLC N + +EA +L + MV+   + P+   Y  LI G C  G++ 
Sbjct: 182 DL-VPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELS 240

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A ++ E M+ +G   +   Y+TL++G  K G+  E   V  EM+    K DT+ Y  +I
Sbjct: 241 FALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMI 300

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N FC+    + A ++L EM E  CK D++++N+ILG LC++GK  EA  + E +   G  
Sbjct: 301 NGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCA 360

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +  SYRIV +      E + A  +L  M+ +GF P  ++  + + RLC+ G
Sbjct: 361 PDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNG 412



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 164/332 (49%), Gaps = 5/332 (1%)

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           ++ Q  L++  Q  RL     +F  +I  + + G  ++A ++  EM   +     + +Y+
Sbjct: 65  EMEQILLQFKTQ-TRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQR-TIKSYN 122

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TL++ L     F    E F  +  K  + PD  T+N++I G C  G+VD A K+++ MKN
Sbjct: 123 TLLNVLMICKEFDVMREHFVNI--KRHVKPDGCTFNIMIRGLCSDGRVDDALKVLDEMKN 180

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVD 361
               PN   + TL+ G C   KL+EA ++ D M N   L P+   Y TLI   C  G + 
Sbjct: 181 RDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELS 240

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            AL L +EM+  G K D   ++ ++ GL + G+ +E  G+L ++   G   +  +Y +++
Sbjct: 241 FALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMI 300

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N  C+  + E A ++L  M+     P   + N +L  LCK G   +A+     +   G  
Sbjct: 301 NGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCA 360

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P+  S+ ++ + +    +   A  +LDE+V K
Sbjct: 361 PDVVSYRIVFDGLSDAMEFKDAAFILDEMVFK 392



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 2/170 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K ++ I++ LI    K G  +  F VL EM+       + +TY+ +I+G CK+  F  A
Sbjct: 254 VKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCK-ADTVTYNVMINGFCKDKDFETA 312

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ +EM+ +++  PD ++YNV++   C+ GK   A  + E M   GC P+V +Y  + +
Sbjct: 313 YKILDEMM-ENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFD 371

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           G     + ++A  + DEM      P +      IN  C+ G  D    +L
Sbjct: 372 GLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNGDEDLVWSVL 421


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 221/420 (52%), Gaps = 8/420 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ++ IF     QKG+ H    Y  ++DKL   K+F+ +D +L Q+  E   F E +F+ +M
Sbjct: 85  SMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIM 144

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K++   +L  +   M   +  +   +P+ K+ +  L++L+ +N   +A N   Y      
Sbjct: 145 KYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVF-YEMLSKG 203

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P    F +++K  C    +++A  +L++M K     PN + Y TLI  L K  R  EA
Sbjct: 204 VIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHG-CVPNSVVYQTLIHALSKRDRVNEA 262

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L EEM      LPD  T+N +I G CR  ++    K+++ M   G  PN   Y  LMN
Sbjct: 263 LKLLEEMFLMG-CLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMN 321

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE-MKERGCK 376
           G C+ GK+ EA+ + +++      P+ + +T LIN + ++GR+DEA   L + M + GC+
Sbjct: 322 GLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+ TFN ++ GLC++G +  A+ M+  +  +G   N  +Y  +L+  C+K +LE+A  +
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M  +GF  +    N LL  LCK G    A   L  + + G KP+  ++  L+  +C+
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 237/480 (49%), Gaps = 18/480 (3%)

Query: 39  KADPPVETSDTCVDARK----RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHN 94
           +A+ P + +   +D +        F S+   + ++     P  A  +F  +   KG    
Sbjct: 149 RANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEML-SKGVIPT 207

Query: 95  NATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
             T+  ++  L    + +   ++LR MT   C  +  ++  L+   S        L++  
Sbjct: 208 VYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLE 267

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHH 212
           ++  +    P +   +  +  L   N++       K  ++ L     PN   + +L+   
Sbjct: 268 EMF-LMGCLPDVDTFNDVIYGLCRLNRIHEGA---KLVDRMLFRGFTPNDITYGVLMNGL 323

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           C+ G ++ A  +L     +++  PN + ++ LI+G  K+GR  EA     + + K+   P
Sbjct: 324 CRVGKVDEAQVLL-----NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRP 378

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D  T+N LI G C+ G +  A  ++  M  NGC PN+  YTTL++GFCK+ +L+EA  V 
Sbjct: 379 DVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVL 438

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM     + + +GY  L+   C+ G+V +AL++L EM ++GCK DI TFN ++ GLC+ 
Sbjct: 439 NEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKV 498

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
            + E+AL +   +  DG+  N  +Y  +++   + G +++A++L+  ML RG      T 
Sbjct: 499 DRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITY 558

Query: 453 NELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           N L+   CK G A + A+ LF  +V     P + S  LL+  +CR  K+  A ELL +++
Sbjct: 559 NGLIKAFCKLG-ATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI 617



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 207/419 (49%), Gaps = 42/419 (10%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  N+ TY  +++ L R  K +    +L ++                           
Sbjct: 307 RGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV--------------------------- 339

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P+    +  +N  ++S ++D A  FL         +P+   FN L
Sbjct: 340 -------------PTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTL 386

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK+G + SA +++ +M  +  + PNLITY+TL+DG CK  +  EA  +  EM +K 
Sbjct: 387 IHGLCKKGLMGSAVDMVNDMSANGCT-PNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
             L + + YNVL+   C+ GKV +A  ++  M + GC P++F + TL+ G CK  + ++A
Sbjct: 446 FEL-NIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDA 504

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             ++ +M    +  +T+ Y TLI+ F R G + EAL+L+ +M  RGC  D +T+N ++  
Sbjct: 505 LALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKA 564

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C+ G  E+ALG+ +++    +  +  S  +++N  C+ G++  A+ELLR M+ RG  P 
Sbjct: 565 FCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPD 624

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             T N L+  LCK G   +A      L   G +P++ ++  L+   CR      A+ LL
Sbjct: 625 VVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLL 683



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 159/317 (50%), Gaps = 9/317 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++ N +S   G   N  TY T+LD   +  + E    VL +M+ +  + +   +  L+
Sbjct: 399 AVDMVNDMSAN-GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLL 457

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL- 196
           +         + L+M  ++     +K     I T   L+    +VD  ++ L      L 
Sbjct: 458 RALCKNGKVPKALDMLGEM----SDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL 513

Query: 197 -RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             +  NT  +N LI    + G ++ A +++ +M          ITY+ LI   CK G   
Sbjct: 514 DGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDE-ITYNGLIKAFCKLGATE 572

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ LF+EMV KD ++P  ++ N+LI+G CR GKV  A +++  M + G  P+V  Y +L
Sbjct: 573 KALGLFDEMVRKD-LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSL 631

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK G ++EA  +F++++   ++PD I Y TLI   CRAG  D+A  LL    E   
Sbjct: 632 INGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAF 691

Query: 376 KADIVTFNIILGGLCRE 392
             + VT+ I++    +E
Sbjct: 692 IPNDVTWYILVSNFIKE 708



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 1/236 (0%)

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
            Y+VLID      +     K++  +K  G       +  +M  + +     +A  +  +M
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 336 KN-FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           K  +  +P    Y  +++    A     A  +  EM  +G    + TF +++  LC   +
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++ A  +L  +   G   N   Y+ +++   ++  + +A++LL  M   G LP   T N+
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           ++  LC+     + A  +  ++  GF P   ++ +L+  +CR  K+  A  LL+++
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV 339



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 17/221 (7%)

Query: 309 VFNYTTLMNGFCKE--------GKLQEAKEVFDEMKNFLLKPDTIG-------YTTLINC 353
           +F +     G+C           KL  AKE F  +   LL+    G       +  ++  
Sbjct: 88  IFQWAGSQKGYCHTFDVYHVLIDKLGAAKE-FKVIDKLLLQIKEEGIAFRESLFICIMKY 146

Query: 354 FCRAGRVDEALELLKEMKE-RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
           + RA    +A  +L +MK    C+    ++N++L  L        A  +  ++   G+  
Sbjct: 147 YGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIP 206

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
              ++ +V+   C   E++ A  LLR M   G +P+      L+  L K     +A   L
Sbjct: 207 TVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLL 266

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             +  MG  P+ D++  ++  +CR  ++    +L+D ++ +
Sbjct: 267 EEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFR 307


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 183/315 (58%), Gaps = 5/315 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N++I  +CK G + +A  VL  M  S    P+++TY+T++  LC +G+ ++A+E
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAME 225

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + M+ +D   PD +TY +LI+  CR   V +A K+++ M++ GC P+V  Y  L+NG 
Sbjct: 226 VLDRMLQRD-CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGI 284

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG+L EA +  ++M +   +P+ I +  ++   C  GR  +A +LL +M  +G    +
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFNI++  LCR+G +  A+ +LEK+   G   N  SY  +L+  C++ ++++AIE L  
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T N +L  LCK G  EDA   L  L   G  P   ++  +++ + +  K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 500 LLFAFELLDELVIKE 514
              A +LLDE+  K+
Sbjct: 465 TGKAIKLLDEMRAKD 479



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 180/325 (55%), Gaps = 6/325 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+L+   CK G L+ A + L +M  S    PN+IT++ ++  +C  GR+ +A +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVITHNIILRSMCSTGRWMDAEK 330

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  +M+ K    P  +T+N+LI+  CR G + RA  I+E M  +GC PN  +Y  L++GF
Sbjct: 331 LLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGF 389

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKE K+  A E  + M +    PD + Y T++   C+ G+V++A+E+L ++  +GC   +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N ++ GL + GK  +A+ +L+++    +  +  +Y  ++    ++G++++AI+    
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
               G  P+  T N +++ LCK    + A   L  ++  G KP   S+ +L+E +     
Sbjct: 510 FERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGM 569

Query: 500 LLFAFELLDEL----VIKESGTIQV 520
              A ELL+EL    ++K S   QV
Sbjct: 570 AKEALELLNELCNKGLMKRSSAEQV 594



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 142/292 (48%), Gaps = 41/292 (14%)

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           NG F  A   F        +L D  + N L     R G+++   K +E M  +G  P++ 
Sbjct: 88  NGHFSSANSSF--------VLEDVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDII 138

Query: 311 NYTTLMNGFCKEGKLQEAKEVFD-------------------------EMKNFL------ 339
             TTL+ GFC+ GK ++A ++ +                         E+ N L      
Sbjct: 139 PCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM 198

Query: 340 -LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            + PD + Y T++   C +G++ +A+E+L  M +R C  D++T+ I++   CR+  + +A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQA 258

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           + +L+++   G   +  +Y +++N  C++G L++AI+ L  M   G  P+  T N +L  
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +C  G   DA   L  ++  GF P   ++ +L+  +CR   L  A ++L+++
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 39/190 (20%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+EI N +S  KG +    TY T++D LA+  K      +L +M  +  K     + +L+
Sbjct: 433 AVEILNQLS-SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
              S     +  ++ FH+   +   +P+    ++ +  L ++ Q D A +FL Y      
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMG-VRPNAVTFNSIMLGLCKTRQTDRAIDFLVY------ 544

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
                     +I   CK                     P   +Y+ LI+GL   G  +EA
Sbjct: 545 ----------MINRGCK---------------------PTETSYTILIEGLAYEGMAKEA 573

Query: 258 IELFEEMVSK 267
           +EL  E+ +K
Sbjct: 574 LELLNELCNK 583


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 237/478 (49%), Gaps = 35/478 (7%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           L++   + + ++EIF     QKG+ H+ + Y  ++DKL     F+ +D +L QM  E   
Sbjct: 77  LLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIV 136

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
           F E +F+ +MK++    L  +   +   +  +   +PS ++ +  L++L+  N   +A N
Sbjct: 137 FRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASN 196

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
              Y      + PN   F +++K  C    +++A  +L++M K     PN + Y TLID 
Sbjct: 197 VF-YDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTK-HGCVPNSMIYQTLIDA 254

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC-- 305
           L K  R  EA++L EEM       PD  T+N +I GFCR  +V    K+++ M   G   
Sbjct: 255 LSKRDRVDEALKLLEEMFLMG-CPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTP 313

Query: 306 -----------------------------NPNVFNYTTLMNGFCKEGKLQEAKE-VFDEM 335
                                         PNV ++ TL+NGF + G+L EA   V+D+M
Sbjct: 314 NDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKM 373

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
            N    PD   ++TL+N  C+ G    ALEL+ +M  +GCK ++ T+ I++ G C++G++
Sbjct: 374 INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           EEA  +L ++   G  LN   Y  +++  C+ G++ +A+++   M  +G  P   T N L
Sbjct: 434 EEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSL 493

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +  LC+    EDA      +V  G    S ++  L+    R  ++  A +L+++++ +
Sbjct: 494 IFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFR 551



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 225/456 (49%), Gaps = 14/456 (3%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           F S+   + ++     P  A  +F  +   KG + N+ T+  ++  L    + +    +L
Sbjct: 175 FRSYNVVLDVLVVGNCPSVASNVFYDML-SKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           R MT   C  +  I+  L+   S     +  L++  ++  +    P +   +T +     
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMF-LMGCPPDVNTFNTVIYGFCR 292

Query: 179 SNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
            N+V      +      + LK   PN   +  L+   CK   ++ A  +L     S++  
Sbjct: 293 LNRVLEGAKLV----DRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL-----SKVPG 343

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN++ ++TL++G  +NGR  EA     + +  +  +PD  T++ L++G C+ G    A +
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M   GC PN+  YT L++GFCK+G+L+EA  +  EM       +T+GY  LI+  C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G++ EAL++  EM  +GCK DI TFN ++ GLCR  ++E+AL +   +  +G+  N  
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  +++   ++GE+++A++L+  ML RG      T N L+  LCK G  E        +
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  G  P   +  +L+   C   K+  A E + +++
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI 619



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 186/333 (55%), Gaps = 2/333 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +N  + + +++ A  F+     +    P+   F+ L+   CK+G   SA E
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++ +M  ++   PNL TY+ LIDG CK G+  EA  +  EM++K   L + + YN LI  
Sbjct: 404 LVNDMD-AKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSL-NTVGYNALISA 461

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ GK+  A  +   M + GC P++F + +L+ G C+  ++++A  ++ +M    +  +
Sbjct: 462 LCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIAN 521

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           ++ + TLI+ F R G + EAL+L+ +M  RGC  D +T+N ++  LC+ G +E+ LG+ E
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE 581

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  +  +  I++N  C  G++  A+E +R M+ RGF P   T N L+  LCK G
Sbjct: 582 EMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRG 641

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             ++A      L   G +P+S ++  L+  +CR
Sbjct: 642 RIQEALNLFEKLQAEGIQPDSITYNTLICWLCR 674



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 196/403 (48%), Gaps = 7/403 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF  N+ TY  ++  L +  + +   A+L ++       H    +N      N  L+E 
Sbjct: 309 KGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNV-VHFNTLVN--GFVRNGRLNEA 365

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              ++ K+       P +   ST +N L +      A   +   +     KPN   + IL
Sbjct: 366 TAFVYDKMIN-NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK-GCKPNLNTYTIL 423

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK+G LE A  +L+EM     S  N + Y+ LI  LCK+G+  EA+++F EM SK 
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSL-NTVGYNALISALCKHGKIHEALDMFGEMSSKG 482

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              PD  T+N LI G CR  +++ A  +   M   G   N   + TL++ F + G++QEA
Sbjct: 483 -CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEA 541

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++ ++M       D I Y  LI   C+ G V++ L L +EM  +G    I+T NI++ G
Sbjct: 542 LKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILING 601

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C  GK+  AL  +  + + G   +  +Y  ++N  C++G +++A+ L   +   G  P 
Sbjct: 602 FCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPD 661

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             T N L+  LC+ G  +DA   L+  VE GF P   +W +LV
Sbjct: 662 SITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 225/419 (53%), Gaps = 5/419 (1%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           ++F +  +   F   ++T +++++  A    F++V+ +L ++  E     E  F+ + + 
Sbjct: 62  KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRA 121

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY---SNQHL 196
           +    L ++ +++FH++    R K S+K+ ++ LN++I          F  Y   SN ++
Sbjct: 122 YGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM 181

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + PN   FN++IK  CK   ++ A EV + M + +   P+  TY TL+DGLCK  R  E
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK-CLPDGYTYCTLMDGLCKEERIDE 240

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L +EM S +   P  + YNVLIDG C+ G + R  K+++ M   GC PN   Y TL+
Sbjct: 241 AVLLLDEMQS-EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G C +GKL +A  + + M +    P+ + Y TLIN   +  R  +A+ LL  M+ERG  
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +   +++++ GL +EGK EEA+ +  K+   G   N   Y ++++  C++G+  +A E+
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L  M+  G LP+  T + L+    K G+ E+A      + + G       +++L++ +C
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 219/456 (48%), Gaps = 37/456 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F  + E+K    +  TY T++D L + ++ +    +L +M  E C     I+  L+
Sbjct: 206 AIEVFRGMPERKCL-PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                     RV ++   +  +    P+    +T ++ L    ++D A + L+      +
Sbjct: 265 DGLCKKGDLTRVTKLVDNMF-LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS-K 322

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN   +  LI    K+     A  +L  M++ +  + N   YS LI GL K G+  EA
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE-RGYHLNQHIYSVLISGLFKEGKAEEA 381

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L+ +M  K    P+ + Y+VL+DG CR GK + AK+I+  M  +GC PN + Y++LM 
Sbjct: 382 MSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF K G  +EA +V+ EM       +   Y+ LI+  C  GRV EA+ +  +M   G K 
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-------YLNKASYRIVLNFSCQKGEL 430
           D V ++ I+ GLC  G ++ AL    KL+++ +         +  +Y I+L+  C + ++
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAAL----KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556

Query: 431 EKAIELLRLMLCRGFLPHYATSN---------------------ELLVRLCKAGMAEDAA 469
            +A++LL  ML RG  P   T N                     EL+VRL K      A 
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGAC 616

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
             +  ++     P++ +WA++V  IC+ +K+  A +
Sbjct: 617 TIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 162/310 (52%), Gaps = 3/310 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F ++ + + K    + A ++   M        ++ +++++++ +   G +   +E ++ +
Sbjct: 115 FIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV 174

Query: 265 VSKD---QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           V+ +    I P+ L++N++I   C+   VDRA ++   M    C P+ + Y TLM+G CK
Sbjct: 175 VNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           E ++ EA  + DEM++    P  + Y  LI+  C+ G +    +L+  M  +GC  + VT
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N ++ GLC +GK+++A+ +LE++       N  +Y  ++N   ++     A+ LL  M 
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG+  +    + L+  L K G AE+A      + E G KP    +++LV+ +CR  K  
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414

Query: 502 FAFELLDELV 511
            A E+L+ ++
Sbjct: 415 EAKEILNRMI 424



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 169/370 (45%), Gaps = 23/370 (6%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K D  V   +  V ++     +++G  I+ +  ++    A+ + +++ E++G++ N   Y
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM-EERGYHLNQHIY 365

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
           + ++  L +  K E   ++ R+M  + CK +  ++  L+             E+ +++  
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
            +   P+    S+ +    ++   + A    K  ++    +   C +++LI   C  G +
Sbjct: 426 -SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC-YSVLIDGLCGVGRV 483

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ--ILPDALT 276
           + A  V  +M    +  P+ + YS++I GLC  G    A++L+ EM+ +++    PD +T
Sbjct: 484 KEAMMVWSKMLTIGIK-PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN+L+DG C    + RA  ++  M + GC+P+V    T +N       L E     D+ +
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN------TLSEKSNSCDKGR 596

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +FL          L+    +  RV  A  +++ M  +       T+ +I+  +C+  KI 
Sbjct: 597 SFL--------EELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKIN 648

Query: 397 EALGMLEKLW 406
            A   ++K W
Sbjct: 649 AA---IDKCW 655


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 180/311 (57%), Gaps = 5/311 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+LI  +CK G ++ A EVL+ M  +    P+++TY+T++  LC +G+ +EA+E
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEVLERMSVA----PDVVTYNTILRSLCDSGKLKEAME 229

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + +  + + +  PD +TY +LI+  C    V +A K+++ M+  GC P+V  Y  L+NG 
Sbjct: 230 VLDRQLQR-ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 288

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG+L EA +  + M ++  KP+ I +  ++   C  GR  +A  LL +M  +GC   +
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV 348

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFNI++  LCR+  +  A+ +LEK+   G   N  SY  +L+  CQ+ ++++AIE L +
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T N LL  LCK G  + A   L  L   G  P   ++  +++ + +  K
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468

Query: 500 LLFAFELLDEL 510
             +A ELL+E+
Sbjct: 469 TEYAVELLEEM 479



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 166/296 (56%), Gaps = 2/296 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N+LI   CK G L+ A + L  M  S    PN+IT++ ++  +C  GR+ +A 
Sbjct: 275 KPDVVTYNVLINGICKEGRLDEAIKFLNNMP-SYGCKPNVITHNIILRSMCSTGRWMDAE 333

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L  +M+ K    P  +T+N+LI+  CR   + RA  ++E M  +GC PN  +Y  L++G
Sbjct: 334 RLLSDMLRKG-CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHG 392

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FC+E K+  A E  + M +    PD + Y TL+   C+ G+VD A+E+L ++  +GC   
Sbjct: 393 FCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPV 452

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+N ++ GL + GK E A+ +LE++   G+  +  +Y  +L    ++G++++AI++  
Sbjct: 453 LITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFH 512

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            M      P   T N +++ LCKA     A   L  +VE G KP   ++ +L+E I
Sbjct: 513 DMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 202/380 (53%), Gaps = 10/380 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNL 136
           ALE+     E+     +  TY TIL  L    K  EA++ + RQ+  E C      +  L
Sbjct: 195 ALEVL----ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE-CYPDVITYTIL 249

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           ++   N S   + +++  ++      KP +   +  +N + +  ++D A  FL     + 
Sbjct: 250 IEATCNDSGVGQAMKLLDEMRK-KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY- 307

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
             KPN    NI+++  C  G    A  +L +M +   S P+++T++ LI+ LC+      
Sbjct: 308 GCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCS-PSVVTFNILINFLCRKRLLGR 366

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           AI++ E+M  K   +P++L+YN L+ GFC+  K+DRA + +E M + GC P++  Y TL+
Sbjct: 367 AIDVLEKM-PKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLL 425

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
              CK+GK+  A E+ +++ +    P  I Y T+I+   + G+ + A+ELL+EM+ +G K
Sbjct: 426 TALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLK 485

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            DI+T++ +L GL REGK++EA+ +   +    I  +  +Y  ++   C+  +  +AI+ 
Sbjct: 486 PDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 545

Query: 437 LRLMLCRGFLPHYATSNELL 456
           L  M+ +G  P  AT   L+
Sbjct: 546 LAYMVEKGCKPTEATYTILI 565



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 148/263 (56%), Gaps = 4/263 (1%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L +NG   E ++  E M+ +  I PD +    LI GFCR GK  +A +IME ++N+G  P
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVP 174

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V  Y  L+ G+CK G++ +A EV + M    + PD + Y T++   C +G++ EA+E+L
Sbjct: 175 DVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVL 231

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
               +R C  D++T+ I++   C +  + +A+ +L+++   G   +  +Y +++N  C++
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 291

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G L++AI+ L  M   G  P+  T N +L  +C  G   DA   L  ++  G  P   ++
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351

Query: 488 ALLVELICRGRKLLFAFELLDEL 510
            +L+  +CR R L  A ++L+++
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKM 374



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 127/236 (53%), Gaps = 3/236 (1%)

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N+ +    R G+++   K +E M   G  P+V   T+L+ GFC+ GK ++A  + + ++N
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               PD I Y  LI  +C++G +D+ALE+L+ M       D+VT+N IL  LC  GK++E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKE 226

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A+ +L++      Y +  +Y I++  +C    + +A++LL  M  +G  P   T N L+ 
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +CK G  ++A   L  +   G KP   +  +++  +C   + + A  LL +++ K
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342



 Score = 38.1 bits (87), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 3/133 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+EI N +S  KG +    TY T++D L +  K E    +L +M  +  K     +  L+
Sbjct: 437 AVEILNQLS-SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLL 495

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           +        +  +++FH +  ++  KPS    +  +  L ++ Q   A +FL Y  +   
Sbjct: 496 RGLGREGKVDEAIKIFHDMEGLSI-KPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK-G 553

Query: 198 LKPNTCIFNILIK 210
            KP    + ILI+
Sbjct: 554 CKPTEATYTILIE 566


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 182/315 (57%), Gaps = 5/315 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N++I  +CK G + +A  VL  M  S    P+++TY+T++  LC +G+ ++A+E
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAME 225

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + M+ +D   PD +TY +LI+  CR   V  A K+++ M++ GC P+V  Y  L+NG 
Sbjct: 226 VLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG+L EA +  ++M +   +P+ I +  ++   C  GR  +A +LL +M  +G    +
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFNI++  LCR+G +  A+ +LEK+   G   N  SY  +L+  C++ ++++AIE L  
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T N +L  LCK G  EDA   L  L   G  P   ++  +++ + +  K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 500 LLFAFELLDELVIKE 514
              A +LLDE+  K+
Sbjct: 465 TGKAIKLLDEMRAKD 479



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 182/325 (56%), Gaps = 6/325 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+L+   CK G L+ A + L +M  S    PN+IT++ ++  +C  GR+ +A +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVITHNIILRSMCSTGRWMDAEK 330

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  +M+ K    P  +T+N+LI+  CR G + RA  I+E M  +GC PN  +Y  L++GF
Sbjct: 331 LLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKE K+  A E  + M +    PD + Y T++   C+ G+V++A+E+L ++  +GC   +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N ++ GL + GK  +A+ +L+++    +  +  +Y  ++    ++G++++AI+    
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
               G  P+  T N +++ LCK+   + A   L  ++  G KP   S+ +L+E +     
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569

Query: 500 LLFAFELLDEL----VIKESGTIQV 520
              A ELL+EL    ++K+S   QV
Sbjct: 570 AKEALELLNELCNKGLMKKSSAEQV 594



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 147/296 (49%), Gaps = 33/296 (11%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           + + G   E  +  E MV    + PD +    LI GFCR GK  +A KI+E ++ +G  P
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170

Query: 308 NVFNYTTLMNGFCK--------------------------------EGKLQEAKEVFDEM 335
           +V  Y  +++G+CK                                 GKL++A EV D M
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PD I YT LI   CR   V  A++LL EM++RGC  D+VT+N+++ G+C+EG++
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA+  L  +   G   N  ++ I+L   C  G    A +LL  ML +GF P   T N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC+ G+   A   L  + + G +P S S+  L+   C+ +K+  A E L+ +V
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           + R G++EE    LE + Y G   +      ++   C+ G+  KA ++L ++   G +P 
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N ++   CKAG   +   AL  L  M   P+  ++  ++  +C   KL  A E+LD
Sbjct: 172 VITYNVMISGYCKAGEINN---ALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 509 ELVIKE 514
            ++ ++
Sbjct: 229 RMLQRD 234



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 3/151 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+EI N +S  KG +    TY T++D LA+  K      +L +M  +  K     + +L+
Sbjct: 433 AVEILNQLS-SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
              S     +  ++ FH+   +   +P+    ++ +  L +S Q D A +FL +      
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGI-RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-G 549

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            KPN   + ILI+     G  + A E+L E+
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNEL 580


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 216/397 (54%), Gaps = 5/397 (1%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           L+K EK P+ AL +F++ S Q G+ H+   +  IL +L+  K    V  ++  +  + CK
Sbjct: 16  LLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCK 75

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
             E + L ++K ++   +    L+ F K+  I   KP +++ +  LN  IE+N ++ A++
Sbjct: 76  CTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAES 135

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           FL Y  + + + PN   +NILIK   K+     A  +L  M    +  P++ +Y T+I+G
Sbjct: 136 FLAYF-ETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLK-PDVYSYGTVING 193

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC-N 306
           + K+G    A+E+F+EM  +  ++PD + YN++IDGF + G   + K+I E +    C  
Sbjct: 194 MVKSGDLVSALEVFDEMFERG-LVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVY 252

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           PNV  Y  ++NG CK G+  E+ E+++ MK    + D   Y++LI   C  G VD A+E+
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
            KEM +R    D+VT+N +L G CR GKI+E+  +   +  +  + N  SY I +    +
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFE 371

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
             ++E+AI +  L+  RG      T   L+  LCK G
Sbjct: 372 NRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNG 408



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 200/386 (51%), Gaps = 38/386 (9%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           KP + +  T +N +++S   DL      +     R L P+   +NI+I    KRG     
Sbjct: 181 KPDVYSYGTVINGMVKSG--DLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQG 238

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+ + + K    YPN++TY+ +I+GLCK GRF E++E++E M  K++   D  TY+ LI
Sbjct: 239 KEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERM-KKNECEMDLFTYSSLI 297

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK----- 336
            G C  G VD A ++ + M       +V  Y  L+NGFC+ GK++E+ E++  M      
Sbjct: 298 CGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH 357

Query: 337 -----NFLLK------------------------PDTIGYTTLINCFCRAGRVDEALELL 367
                N  ++                         D+  Y  LI+  C+ G +++AL++L
Sbjct: 358 NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKIL 417

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           KE K+ G K D   ++ I+ GL ++G+++EALG++ ++   G  L+      ++N   + 
Sbjct: 418 KEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRA 477

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
            +LE+AI   R M  +G  P   + N L+  LCKA    DA   +  ++E  +KP+  ++
Sbjct: 478 SKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITY 537

Query: 488 ALLVELICRGRKLLFAFELLDELVIK 513
           +LL++ +C+G+K+  A  L  ++++K
Sbjct: 538 SLLMDGLCQGKKIDMALNLWRQVLVK 563



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 165/311 (53%), Gaps = 6/311 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +NI I+   +   +E A  V  E+ + + S  +  TY  LI GLCKNG   +A+++
Sbjct: 358 NVVSYNIFIRGLFENRKVEEAISVW-ELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKI 416

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC--NPNVFNYTTLMNG 318
            +E       L DA  Y+ ++DG  + G+VD A  I+  M   GC  +P+V N   L+NG
Sbjct: 417 LKEAKDGGDKL-DAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN--PLING 473

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           F +  KL+EA   F EM+     P  + Y TLIN  C+A R  +A   +KEM E+  K D
Sbjct: 474 FVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPD 533

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+++++ GLC+  KI+ AL +  ++   G+  +   + I+++  C  G++E A+ L  
Sbjct: 534 MITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYS 593

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M     LP+  T N L+  L KA   E A++    + + GF+P+  S+ + ++ +C   
Sbjct: 594 NMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCG 653

Query: 499 KLLFAFELLDE 509
           ++     L D+
Sbjct: 654 RISDGIALFDD 664



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 149/298 (50%), Gaps = 6/298 (2%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           ++  + +LI   CK G L  A ++LKE K       +   YS+++DGL K GR  EA+ +
Sbjct: 393 DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKL-DAFAYSSIVDGLSKQGRVDEALGI 451

Query: 261 FEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             +M     ++ P     N LI+GF R  K++ A      M+  GC+P V +Y TL+NG 
Sbjct: 452 VHQMDKYGCELSPHVC--NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGL 509

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  +  +A     EM     KPD I Y+ L++  C+  ++D AL L +++  +G + D+
Sbjct: 510 CKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDV 569

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
              NI++ GLC  GKIE+AL +   +       N  ++  +++   +  E E A  +   
Sbjct: 570 TMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWAC 629

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICR 496
           M   GF P   + N  L  LC  G   D  IALF   ++ G  P S +W +LV  + +
Sbjct: 630 MFKNGFQPDIISYNITLKGLCSCGRISD-GIALFDDALKNGILPTSITWYILVRAVLK 686



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 142/265 (53%), Gaps = 5/265 (1%)

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           A S+ ++ L +  +VD A   +   +++   L P+ C  N LI    +   LE A    +
Sbjct: 431 AYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC--NPLINGFVRASKLEEAICFFR 488

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
           EM+    S P +++Y+TLI+GLCK  RF +A    +EM+ KD   PD +TY++L+DG C+
Sbjct: 489 EMETKGCS-PTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDW-KPDMITYSLLMDGLCQ 546

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
           G K+D A  +   +   G  P+V  +  LM+G C  GK+++A  ++  MK     P+ + 
Sbjct: 547 GKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVT 606

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           + TL++   +A   + A  +   M + G + DI+++NI L GLC  G+I + + + +   
Sbjct: 607 HNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDAL 666

Query: 407 YDGIYLNKASYRIVLNFSCQKGELE 431
            +GI     ++ I++    + G L+
Sbjct: 667 KNGILPTSITWYILVRAVLKLGPLD 691


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 235/444 (52%), Gaps = 4/444 (0%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E +P  + +IF +  +   +   ++T+ ++++  A    F++++ VL +M  E     E 
Sbjct: 67  EPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEK 126

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            F+ + K +    L E+ +++F ++      K + K+ ++ LN++I+      A  F  +
Sbjct: 127 CFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNH 186

Query: 192 --SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
               + + + PN   FN++IK  CK G ++ A +V ++M   +   P++ TY TL+DGLC
Sbjct: 187 VIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCE-PDVYTYCTLMDGLC 245

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K  R  EA+ L +EM   D   P  +T+NVLI+G C+ G + RA K+++ M   GC PN 
Sbjct: 246 KADRIDEAVSLLDEM-QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNE 304

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y TL++G C +GKL++A  + D M +    P+ + Y T+IN   + GR  +   +L  
Sbjct: 305 VTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLAL 364

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M+ERG   +   ++ ++ GL +EGK +EA+ + +++   G  LN   Y  V++  C+ G+
Sbjct: 365 MEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGK 424

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            + A+E+L  M  +G  P+  T + L+    +AG +  A      + +  F      +++
Sbjct: 425 PDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSV 484

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A  +  +++ K
Sbjct: 485 LIHGLCKDGKVKEAMMVWTQMLGK 508



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 218/484 (45%), Gaps = 66/484 (13%)

Query: 78  ALEIFNTVSEQKG--FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           ALE +N V   KG   + N  T+  ++  + +    +    V R MT   C+     +  
Sbjct: 180 ALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCT 239

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           LM         +  + +  ++  I    PS    +  +N L +   +  A   +   N  
Sbjct: 240 LMDGLCKADRIDEAVSLLDEMQ-IDGCFPSPVTFNVLINGLCKKGDLSRAAKLV--DNMF 296

Query: 196 LR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           L+   PN   +N LI   C +G LE A  +L  M  S+   PN++TY T+I+GL K GR 
Sbjct: 297 LKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK-CVPNVVTYGTIINGLVKQGRA 355

Query: 255 -----------------------------------REAIELFEEMVSKDQILPDALTYNV 279
                                              +EA+ LF+EM  K   L + + Y+ 
Sbjct: 356 LDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYEL-NTIVYSA 414

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +IDG CR GK D A +++  M N GC PN +  ++LM GF + G    A EV+ +M    
Sbjct: 415 VIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHN 474

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
              + + Y+ LI+  C+ G+V EA+ +  +M  +GCK D+V ++ ++ GL   G +E+A+
Sbjct: 475 FTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAM 534

Query: 400 GMLEKLWYDGI--YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS----- 452
            +  ++   G     +  +Y I+LN  C++  + +AI+LL  ML RG  P   T      
Sbjct: 535 QLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLR 594

Query: 453 ----------------NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
                           +EL+VRL K      A+  +  +++    P+  +WA +VE +C+
Sbjct: 595 MLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCK 654

Query: 497 GRKL 500
            +K+
Sbjct: 655 PKKV 658



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 130/310 (41%), Gaps = 42/310 (13%)

Query: 44  VETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD 103
           +E    CV+    S  IS      L K E + Q A+ +F  ++  KG+  N   Y+ ++D
Sbjct: 365 MEERGYCVNEYVYSTLIS-----GLFK-EGKSQEAMHLFKEMT-VKGYELNTIVYSAVID 417

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI--HPITR 161
            L R  K +    VL +MT + C  +     +LMK F       R +E++  +  H  T+
Sbjct: 418 GLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQ 477

Query: 162 EKPSLKAISTCLNLLIESNQVD--LAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTL 218
            +        C ++LI     D  + +  + ++    +  KP+   ++ +I      G +
Sbjct: 478 NE-------VCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLV 530

Query: 219 ESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           E A ++  EM  +   S P+++TY+ L++ LCK      AI+L   M+ +    PD +T 
Sbjct: 531 EDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRG-CDPDLVTC 589

Query: 278 NVLI-----------DG----------FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
            + +           DG            +  +V  A KI+E M      P    +  ++
Sbjct: 590 TIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVV 649

Query: 317 NGFCKEGKLQ 326
              CK  K+Q
Sbjct: 650 ENLCKPKKVQ 659


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 232/437 (53%), Gaps = 15/437 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+   + +  GF  +  T+  I+  +A     +     LR M    C  +   +  L+
Sbjct: 131 ALELLEEM-KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNVVTYTALI 186

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
             F+     E  +++  ++    RE+   P+L   +  ++ L + + V  AQ+ +K   +
Sbjct: 187 AAFARAKKLEEAMKLLEEM----RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 242

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
                PN   FN L+   CKRG ++ A ++L  M    M  PN++TYS LIDGLCK+ +F
Sbjct: 243 G-GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR-PNVVTYSALIDGLCKSQKF 300

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA E+ EEM ++  + PDA TY+ LI G C+  K++ A++++  M  +GC P+V  Y++
Sbjct: 301 LEAKEVLEEMKTRG-VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++ FCK GKL EA++   EM+     PD + Y T+I+  C+ G++ EA  +L++M+E G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419

Query: 375 -CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
               D+VT++ ++ GLC+   + EA  +L+++   G   +  +Y  +++  C+ G LE+A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             LL+ M   G  P+  T   L+  LCKA   ++A   +  +   G  P   ++  +V  
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539

Query: 494 ICRGRKLLFAFELLDEL 510
           +C   ++  A +L+  +
Sbjct: 540 LCVSGRIKEAQQLVQRM 556



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 224/475 (47%), Gaps = 44/475 (9%)

Query: 73  KEPQCALEIFNTVSEQ-KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           K+ + AL  F        GF+H   ++ ++L  L R KK      + R     +C+    
Sbjct: 54  KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC 113

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            +  ++  F N       LE+  ++       P     +  +  +  +  +D A + L+ 
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKSAGF-APDAFTHTPIITAMANAGDLDGAMDHLR- 171

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
               +   PN   +  LI    +   LE A ++L+EM++ +   PNL+TY+ L+D LCK 
Sbjct: 172 ---SMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRE-RGCPPNLVTYNVLVDALCKL 227

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
                A ++ ++M+ +    P+ +T+N L+DGFC+ G VD A+K++  M   G  PNV  
Sbjct: 228 SMVGAAQDVVKKMI-EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+ L++G CK  K  EAKEV +EMK   + PD   Y+ LI+  C+A +++EA ++L+ M 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 372 ERGC-----------------------------------KADIVTFNIILGGLCREGKIE 396
             GC                                     D+VT+N ++ GLC+ GKI 
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 397 EALGMLEKLWYDGIYL-NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           EA  +LE++   G  L +  +Y  V+N  C+   L +A +LL  M   G  P   T   +
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  LCK G  E+A   L G+   G  P   ++  L+  +C+ RK+  A  +++E+
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 192/355 (54%), Gaps = 42/355 (11%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  TY+ ++D L + +KF     VL +M                           
Sbjct: 278 KGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM--------------------------- 310

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                 K   +T   P     S  ++ L ++++++ A+  L+         P+  +++ +
Sbjct: 311 ------KTRGVT---PDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSI 360

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G L  A + L+EM+K + S P+++TY+T+IDGLCK G+  EA  + E+M    
Sbjct: 361 IHAFCKSGKLLEAQKTLQEMRKQRKS-PDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LPD +TY+ +I+G C+   +  A+K+++ M   GCNP+V  YTT+++G CK G+L+EA
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           + +   MK     P+ + YTTLI+  C+A +VDEA  +++EM+  GC  ++VT+N ++ G
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539

Query: 389 LCREGKIEEALGMLEKLWYDG---IYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           LC  G+I+EA  +++++  DG      + A+YR ++N       +++A +LL  M
Sbjct: 540 LCVSGRIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 169/323 (52%), Gaps = 16/323 (4%)

Query: 56  RSRFISHGAAI-SLIKCEK--EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE 112
           R   +++ A I  L K +K  E +  LE   T    +G   +  TY+ ++  L +  K E
Sbjct: 281 RPNVVTYSALIDGLCKSQKFLEAKEVLEEMKT----RGVTPDAFTYSALIHGLCKADKIE 336

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPI--TREKPSLKAIS 170
             + +LR+M    C     ++ +++  F       ++LE    +  +   R+ P +   +
Sbjct: 337 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG---KLLEAQKTLQEMRKQRKSPDVVTYN 393

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           T ++ L +  ++  AQ  L+   +   + P+   ++ +I   CK   L  A ++L  M K
Sbjct: 394 TVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 453

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           +  + P+++TY+T+IDGLCK GR  EA  L + M  +    P+ +TY  LI G C+  KV
Sbjct: 454 AGCN-PDVVTYTTIIDGLCKCGRLEEAEYLLQGM-KRAGCAPNVVTYTTLISGLCKARKV 511

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK--PDTIGYT 348
           D A+++ME M+N GC PN+  Y T++NG C  G+++EA+++   MK+   +  PD   Y 
Sbjct: 512 DEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYR 571

Query: 349 TLINCFCRAGRVDEALELLKEMK 371
           T++N    +  V EA +LL++MK
Sbjct: 572 TIVNALMSSDLVQEAEQLLEQMK 594


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 232/438 (52%), Gaps = 10/438 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ++E+F     QKG++H       ++DKL     F+ ++ +L+QM  E   F E +F+ +M
Sbjct: 82  SMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIM 141

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           KH+    L  +   +   +  +    P+ K+ +  L++L++ +   +A N   Y      
Sbjct: 142 KHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVF-YDMLSRG 200

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P    F +++K  C    ++SA  +L++M K     PN + Y TLI  LC+N R  EA
Sbjct: 201 VSPTVYTFGVVMKALCMVSEVDSACSLLRDMAK-HGCVPNSVIYQTLIHALCENNRVSEA 259

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L E+M       PD  T+N +I G CR G++  A K+++ M   G + +   Y  LM+
Sbjct: 260 LQLLEDMFLM-CCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMH 318

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL-KEMKERGCK 376
           G C+ G++ EA+ + +++ N    P+T+ Y TLI+ +  +GR +EA +LL   M   G +
Sbjct: 319 GLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYE 374

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D  TFNI++ GL ++G +  AL +L ++       N  +Y I++N  C++G LE+A E+
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEI 434

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELIC 495
           +  M  +G   +    N L+  LCK G  E+ A+ LFG +   G KP+  ++  L+  +C
Sbjct: 435 VNSMSAKGLSLNTVGYNCLICALCKDGNIEE-ALQLFGEMSGKGCKPDIYTFNSLINGLC 493

Query: 496 RGRKLLFAFELLDELVIK 513
           +  K+  A  L  ++ ++
Sbjct: 494 KNHKMEEALSLYHDMFLE 511



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 222/454 (48%), Gaps = 10/454 (2%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           F S+   + ++     P+ A  +F  +   +G +    T+  ++  L    + ++  ++L
Sbjct: 170 FKSYNVVLDILVDGDCPRVAPNVFYDML-SRGVSPTVYTFGVVMKALCMVSEVDSACSLL 228

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           R M    C  +  I+  L+      +     L++   +  +  E P ++  +  ++ L  
Sbjct: 229 RDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE-PDVQTFNDVIHGLCR 287

Query: 179 SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           + ++  A   L      LR    +   +  L+   C+ G ++ A  +L ++       PN
Sbjct: 288 AGRIHEAAKLL--DRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN-----PN 340

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            + Y+TLI G   +GRF EA +L    +      PDA T+N++IDG  + G +  A +++
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M      PNV  YT L+NGFCK+G+L+EA E+ + M    L  +T+GY  LI   C+ 
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 460

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G ++EAL+L  EM  +GCK DI TFN ++ GLC+  K+EEAL +   ++ +G+  N  +Y
Sbjct: 461 GNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTY 520

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++    +  +++A +L+  ML RG      T N L+  LCK G  E        ++ 
Sbjct: 521 NTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLG 580

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G  P   S  +L+  +CR  K+  A + L +++
Sbjct: 581 KGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 200/410 (48%), Gaps = 11/410 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF+ +  TY  ++  L R  + +   A+L ++       +      L+  +      E 
Sbjct: 304 RGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYN----TLISGYVASGRFEE 359

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFN 206
             ++ +    I   +P     +  ++ L++   +  A   L   N+ +  R +PN   + 
Sbjct: 360 AKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL---NEMVAKRFEPNVITYT 416

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ILI   CK+G LE A E++  M    +S  N + Y+ LI  LCK+G   EA++LF EM  
Sbjct: 417 ILINGFCKQGRLEEAAEIVNSMSAKGLSL-NTVGYNCLICALCKDGNIEEALQLFGEMSG 475

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K    PD  T+N LI+G C+  K++ A  +   M   G   N   Y TL++ F     +Q
Sbjct: 476 KG-CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQ 534

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A ++ DEM       D I Y  LI   C+ G V++ L L +EM  +G    I++ NI++
Sbjct: 535 QAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILI 594

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLCR GK+ +AL  L+ + + G+  +  +Y  ++N  C+ G +++A  L   +   G  
Sbjct: 595 SGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIR 654

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           P   T N L+ R C  GM  DA + L+  V+ GF P   +W++L+  I +
Sbjct: 655 PDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 171/375 (45%), Gaps = 46/375 (12%)

Query: 92  NHNNATYATILDKLARYKKFE-AVDAVLRQMT---YETCKFHEGIFLN-LMKHFSNCSLH 146
           N N   Y T++       +FE A D +   M    YE   +   I ++ L+K     S  
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E + EM  K     R +P++   +  +N   +  +++ A   +  S     L  NT  +N
Sbjct: 398 ELLNEMVAK-----RFEPNVITYTILINGFCKQGRLEEAAEIVN-SMSAKGLSLNTVGYN 451

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM-- 264
            LI   CK G +E A ++  EM   +   P++ T+++LI+GLCKN +  EA+ L+ +M  
Sbjct: 452 CLICALCKDGNIEEALQLFGEMS-GKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510

Query: 265 -----------------VSKDQILP---------------DALTYNVLIDGFCRGGKVDR 292
                            + +D I                 D +TYN LI   C+ G V++
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
              + E M   G  P + +   L++G C+ GK+ +A +   +M +  L PD + Y +LIN
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ G V EA  L  +++  G + D +T+N ++   C EG   +A  +L K    G   
Sbjct: 631 GLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690

Query: 413 NKASYRIVLNFSCQK 427
           N+ ++ I++N+  +K
Sbjct: 691 NEVTWSILINYIVKK 705



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 1/165 (0%)

Query: 354 FCRAGRVDEALELLKEM-KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
           + +AG   +A  LL +M     C     ++N++L  L        A  +   +   G+  
Sbjct: 144 YGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSP 203

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
              ++ +V+   C   E++ A  LLR M   G +P+      L+  LC+     +A   L
Sbjct: 204 TVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLL 263

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
             +  M  +P+  ++  ++  +CR  ++  A +LLD ++++   T
Sbjct: 264 EDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFST 308


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 180/302 (59%), Gaps = 2/302 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q   LKPN   +N +I   CK G +  A +VL+ MK +Q  +P+ + Y+TLI G  K+G 
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMK-NQRIFPDNVVYTTLISGFGKSGN 372

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
                +LF+EM  K +I+PD +TY  +I G C+ GKV  A+K+   M + G  P+   YT
Sbjct: 373 VSVEYKLFDEMKRK-KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++G+CK G+++EA  + ++M    L P+ + YT L++  C+ G VD A ELL EM E+
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G + ++ T+N ++ GLC+ G IE+A+ ++E++   G + +  +Y  +++  C+ GE+ KA
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            ELLR+ML +G  P   T N L+   C +GM ED    +  +++ G  P + ++  L++ 
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQ 611

Query: 494 IC 495
            C
Sbjct: 612 YC 613



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 231/469 (49%), Gaps = 38/469 (8%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           + A  +F   SE  G   N  +Y  IL  L +  K +   ++L QM +         +  
Sbjct: 234 RTAFRVFREYSEV-GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           ++  +       +VL++  ++      KP+    ++ ++ L ++ +V  A+  L+     
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQR-KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQ 351

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            R+ P+  ++  LI    K G +   +++  EMK+ ++  P+ +TY+++I GLC+ G+  
Sbjct: 352 -RIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKI-VPDFVTYTSMIHGLCQAGKVV 409

Query: 256 EAIELFEEMVSK----DQIL------------------------------PDALTYNVLI 281
           EA +LF EM+SK    D++                               P+ +TY  L+
Sbjct: 410 EARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALV 469

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG C+ G+VD A +++  M   G  PNV  Y  L+NG CK G +++A ++ +EM      
Sbjct: 470 DGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFF 529

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PDTI YTT+++ +C+ G + +A ELL+ M ++G +  IVTFN+++ G C  G +E+   +
Sbjct: 530 PDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERL 589

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           ++ +   GI  N  ++  ++   C +  +   IE+ + M  +G +P   T N L+   CK
Sbjct: 590 IKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCK 649

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           A   ++A      +VE GF   + S+  L++   + +K   A +L +E+
Sbjct: 650 ARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 216/434 (49%), Gaps = 18/434 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS---NC 143
           ++KG   N  TY +I+  L +  +    + VLR M  +       ++  L+  F    N 
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373

Query: 144 SLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LK 199
           S+  ++ +       + R+K  P     ++ ++ L ++ +V  A+   K  ++ L   LK
Sbjct: 374 SVEYKLFD------EMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR---KLFSEMLSKGLK 424

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  LI  +CK G ++ AF +  +M +  ++ PN++TY+ L+DGLCK G    A E
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLT-PNVVTYTALVDGLCKCGEVDIANE 483

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM S+  + P+  TYN LI+G C+ G +++A K+ME M   G  P+   YTT+M+ +
Sbjct: 484 LLHEM-SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G++ +A E+   M +  L+P  + +  L+N FC +G +++   L+K M ++G   + 
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TFN ++   C    +   + + + +   G+  +  +Y I++   C+   +++A  L + 
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +GF    A+ N L+    K    E+A      +   GF  E + + + V++      
Sbjct: 663 MVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGN 722

Query: 500 LLFAFELLDELVIK 513
                EL DE + K
Sbjct: 723 WENTLELCDEAIEK 736



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 168/293 (57%), Gaps = 2/293 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           + +AF V +E  +  + + N ++Y+ ++  LC+ G+ +EA  L  +M  +  + PD ++Y
Sbjct: 233 IRTAFRVFREYSEVGVCW-NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV-PDVVSY 290

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           +V++DG+C+  ++ +  K+ME ++  G  PN + Y ++++  CK G++ EA++V   MKN
Sbjct: 291 SVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN 350

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             + PD + YTTLI+ F ++G V    +L  EMK +    D VT+  ++ GLC+ GK+ E
Sbjct: 351 QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVE 410

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +  ++   G+  ++ +Y  +++  C+ GE+++A  L   M+ +G  P+  T   L+ 
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LCK G  + A   L  + E G +P   ++  L+  +C+   +  A +L++E+
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM 523



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/355 (20%), Positives = 162/355 (45%), Gaps = 20/355 (5%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R  PSL+++   + + + S  + +A                  +F    K H   G    
Sbjct: 120 RRDPSLESLCIVVQIAVASKDLRMAHRL---------------VFEFWEKPHLDVGNSFD 164

Query: 221 AF-EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            F E L    K   ++P  + +      L + G   EA +LF+++++   +L    + N+
Sbjct: 165 RFTERLIYTYKDWGAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYG-VLVSVDSCNL 221

Query: 280 LIDGFCRG-GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            +         +  A ++       G   N  +Y  +++  C+ GK++EA  +  +M+  
Sbjct: 222 FLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFR 281

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              PD + Y+ +++ +C+  ++ + L+L++E++ +G K +  T+N I+  LC+ G++ EA
Sbjct: 282 GNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEA 341

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             +L  +    I+ +   Y  +++   + G +    +L   M  +  +P + T   ++  
Sbjct: 342 EQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHG 401

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           LC+AG   +A      ++  G KP+  ++  L++  C+  ++  AF L +++V K
Sbjct: 402 LCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK 456


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 235/454 (51%), Gaps = 5/454 (1%)

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAV 117
           + IS    + L+K EK P  AL IF++  +  G+ H    +  IL +L   K    V  +
Sbjct: 6   KVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRI 65

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
           +  M  + C   E + L+ +K ++ CS+ ++ L +F  +  I    P +++ ++ LN  I
Sbjct: 66  VDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFI 125

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           ESNQ   A+ F  Y  Q   + PN   +NILIK  CK+   E    +L  M ++ ++ P+
Sbjct: 126 ESNQWREAELFFTYF-QTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLN-PD 183

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           +++Y TLI+ L K+G   +A+ELF+EM S   + PD + YN+LIDGF R G   +A +I 
Sbjct: 184 ILSYGTLINALAKSGNLLDAVELFDEM-SVRGVNPDVMCYNILIDGFLRKGDFVKANEIW 242

Query: 298 E-FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +  +  +   P+V  Y  ++NG CK GKL E+ E+++ MK     PD   ++++I+   +
Sbjct: 243 KRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSK 302

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           AG  + A ++ +EM E G   D+ T+N +L GL R GK+ +   +   +  +    N  S
Sbjct: 303 AGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVS 361

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +++       ++E+AI   +L+  RG      T   L+  LCK G    A   L    
Sbjct: 362 YNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAE 421

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G   ++ +++ +V  +C+   L  A EL+ ++
Sbjct: 422 NEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQM 455



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 230/443 (51%), Gaps = 22/443 (4%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E+F T  +  G + N  TY  ++    + ++FE    +L  M      F  G+  +++ +
Sbjct: 134 ELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWM------FENGLNPDILSY 187

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAIS---TCLNLLIESNQVDLAQNFLKYSNQHL 196
            +  +   +   +   +     ++ S++ ++    C N+LI+        +F+K +    
Sbjct: 188 GTLINALAKSGNLLDAVELF--DEMSVRGVNPDVMCYNILIDG--FLRKGDFVKANEIWK 243

Query: 197 RL------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           RL       P+   +NI+I   CK G L+ + E+   MKK++ S P+L T+S++I GL K
Sbjct: 244 RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKS-PDLFTFSSMIHGLSK 302

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G F  A ++F+EM+ +  + PD  TYN ++ G  R GK+++  ++   M  N C  N+ 
Sbjct: 303 AGNFNAAEKVFQEMI-ESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIV 360

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +Y  L+ G     K+++A   +  +    LK D+  Y  LIN  C+ G +++AL +L+E 
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA 420

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +  G   D   ++ ++ GLC++G +E+A+ ++ ++  +   LN   +  ++N   +  +L
Sbjct: 421 ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKL 480

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           E+AI +LR M  +   P   + N ++  LCKA    DA ++L  ++E G KP+  +++LL
Sbjct: 481 EEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           ++ +CRG K+  A  L  + + K
Sbjct: 541 IDGLCRGEKVDMALNLWHQCINK 563



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 220/417 (52%), Gaps = 10/417 (2%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
            +S+G  I+ +        A+E+F+ +S  +G N +   Y  ++D   R   F   + + 
Sbjct: 184 ILSYGTLINALAKSGNLLDAVELFDEMS-VRGVNPDVMCYNILIDGFLRKGDFVKANEIW 242

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLH--ERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           +++  E+  +      N+M +   C L   +  +EM++++     + P L   S+ ++ L
Sbjct: 243 KRLLTESSVYPSVETYNIMIN-GLCKLGKLDESMEMWNRMKK-NEKSPDLFTFSSMIHGL 300

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
            ++   + A+   +   +   L P+   +N ++    + G L   FE+   M K+     
Sbjct: 301 SKAGNFNAAEKVFQEMIES-GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-- 357

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N+++Y+ LI GL  N +  +AI  + +++ +  +  D+ TY +LI+G C+ G +++A +I
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAI-CYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRI 416

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +E  +N G + + F Y+++++G CK+G L++A E+  +MK    K ++  + +LIN + R
Sbjct: 417 LEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVR 476

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           A +++EA+ +L+EMK + C   +V++N I+ GLC+  +  +A   L+++  +G+  +  +
Sbjct: 477 AFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMIT 536

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
           Y ++++  C+  +++ A+ L    + +   P     N ++  LC A    D A+ +F
Sbjct: 537 YSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKV-DVALEIF 592



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 152/304 (50%), Gaps = 2/304 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LK ++  + +LI   CK G L  A  +L+E +       +   YS+++ GLCK G   +A
Sbjct: 390 LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADL-DTFAYSSMVHGLCKKGMLEQA 448

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +EL  +M  K++   ++  +N LI+G+ R  K++ A  ++  MK+  C P V +Y T++N
Sbjct: 449 VELIHQM-KKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIIN 507

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK  +  +A     EM    LKPD I Y+ LI+  CR  +VD AL L  +   +  K 
Sbjct: 508 GLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKP 567

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+   NII+ GLC   K++ AL +  ++       +  ++  ++    + G+  +A+++ 
Sbjct: 568 DLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIW 627

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +L  G  P   + N     LC      DA   L+  ++ G  P + +W +LV  +   
Sbjct: 628 DRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDD 687

Query: 498 RKLL 501
           + L+
Sbjct: 688 KPLM 691



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 8/236 (3%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N+  + ++++   R  K E   +VLR+M  + C      +  ++         ER  + +
Sbjct: 463 NSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKA---ERFSDAY 519

Query: 154 HKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
             +  +  E  KP +   S  ++ L    +VD+A N L +   + RLKP+  + NI+I  
Sbjct: 520 LSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALN-LWHQCINKRLKPDLQMHNIIIHG 578

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C    ++ A E+  +M++     P+L+T++T+++GL K G   EA+++++ ++    + 
Sbjct: 579 LCTAQKVDVALEIFTQMRQVN-CVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG-LQ 636

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           PD ++YN+   G C   +V  A + +    + G  PN   +  L+     +  L E
Sbjct: 637 PDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 1/166 (0%)

Query: 351 INCFCRAGRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           I  + +    D+AL L + M +  GC   I +FN +L       +  EA          G
Sbjct: 85  IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N  +Y I++  SC+K + EK   LL  M   G  P   +   L+  L K+G   DA 
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAV 204

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
                +   G  P+   + +L++   R    + A E+   L+ + S
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESS 250


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/314 (36%), Positives = 179/314 (57%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI  +CK G ++ AF +LK M    M  PNLI+Y+ +I+GLC+ G  +EA E
Sbjct: 43  PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQ-PNLISYNVIINGLCREGSMKEAWE 101

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + EEM  K    PD +TYN L++G+C+ G   +A  I   M  NG +P+V  YT L+N  
Sbjct: 102 ILEEMGYKG-FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 160

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK   L  A E FD+M+   L+P+   YTTLI+ F R G ++EA  +L EM E G    +
Sbjct: 161 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N  + G C   ++EEALG+++++   G+  +  SY  +++  C+KGEL++A ++ + 
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 280

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P   T + L+  LC+     +A      +++MG  P+  ++  L+   C    
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340

Query: 500 LLFAFELLDELVIK 513
           L  A  L DE++ K
Sbjct: 341 LNKALHLHDEMIHK 354



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 193/352 (54%), Gaps = 3/352 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T ++   +  ++D A   LK S     ++PN   +N++I   C+ G+++ A+E
Sbjct: 43  PNVVTYNTLIDAYCKMGRIDEAFGLLK-SMSSKGMQPNLISYNVIINGLCREGSMKEAWE 101

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L+EM     + P+ +TY+TL++G CK G F +A+ +  EMV ++ + P  +TY  LI+ 
Sbjct: 102 ILEEMGYKGFT-PDEVTYNTLLNGYCKEGNFHQALVIHAEMV-RNGVSPSVVTYTALINS 159

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+   ++RA +  + M+  G  PN   YTTL++GF ++G L EA  + +EM      P 
Sbjct: 160 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 219

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y   I+  C   R++EAL +++EM E+G   D+V+++ I+ G CR+G+++ A  M +
Sbjct: 220 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 279

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  +  +Y  ++   C+   L +A +L + ML  G  P   T   L+   C  G
Sbjct: 280 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 339

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
               A      ++  GF P++ ++++L+  + +  +   A  LL +L+ +ES
Sbjct: 340 DLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 391



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 210/425 (49%), Gaps = 28/425 (6%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-SNCSLHE 147
           KG   N  +Y  I++ L R    +    +L +M Y+     E  +  L+  +    + H+
Sbjct: 74  KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 133

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
            ++   H         PS+   +  +N + ++  ++ A  F  +    +R L+PN   + 
Sbjct: 134 ALV--IHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF--FDQMRIRGLRPNERTYT 189

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI    ++G L  A+ +L EM +S  S P+++TY+  I G C   R  EA+ + +EMV 
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEMTESGFS-PSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + PD ++Y+ +I GFCR G++DRA ++ + M   G +P+   Y++L+ G C+  +L 
Sbjct: 249 KG-LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++  EM +  L PD   YTTLIN +C  G +++AL L  EM  +G   D VT+++++
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL ++ +  EA  +L KL Y+    +  +Y  ++  +C   E +  + L++     GF 
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE-NCSNIEFKSVVALIK-----GF- 420

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
                        C  G+  +A      +VE   KP    + +++   CRG  L  AF L
Sbjct: 421 -------------CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNL 467

Query: 507 LDELV 511
             E++
Sbjct: 468 YKEMI 472



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 157/286 (54%), Gaps = 2/286 (0%)

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M +S++S PN+ TY+ LI G C  G  ++ +  F EM  ++  LP+ +TYN LID +C+ 
Sbjct: 1   MIRSRVS-PNVYTYNILIRGFCSVGELQKGLGCFGEM-ERNGCLPNVVTYNTLIDAYCKM 58

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G++D A  +++ M + G  PN+ +Y  ++NG C+EG ++EA E+ +EM      PD + Y
Sbjct: 59  GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 118

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            TL+N +C+ G   +AL +  EM   G    +VT+  ++  +C+   +  A+   +++  
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  N+ +Y  +++   ++G L +A  +L  M   GF P   T N  +   C     E+
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 238

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A   +  +VE G  P+  S++ ++   CR  +L  AF++  E+V K
Sbjct: 239 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 32/383 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E F+ +   +G   N  TY T++D  +R         +L +MT E+      +  N  
Sbjct: 169 AMEFFDQM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT-ESGFSPSVVTYNAF 226

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
            H  +C L ER+ E    +  +  +   P + + ST ++      ++D A   +K     
Sbjct: 227 IH-GHCVL-ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ-MKQEMVE 283

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             + P+   ++ LI+  C+   L  A ++ +EM    +  P+  TY+TLI+  C  G   
Sbjct: 284 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP-PDEFTYTTLINAYCVEGDLN 342

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ L +EM+ K   LPDA+TY+VLI+G  +  +   AK+++  +      P+   Y TL
Sbjct: 343 KALHLHDEMIHKG-FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 401

Query: 316 MN---------------GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           +                GFC +G + EA  VF+ M     KP    Y  +I+  CR G +
Sbjct: 402 IENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNL 461

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI---YLNKASY 417
            +A  L KEM   G     VT   ++  L +EG  EE    + ++  D +    LN+A  
Sbjct: 462 PKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE----MSEVIGDTLRSCRLNEAEL 517

Query: 418 -RIVLNFSCQKGELEKAIELLRL 439
            ++++  + ++G +E  + + RL
Sbjct: 518 AKVLVEINHKEGNMEAVLNVSRL 540


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 176/302 (58%), Gaps = 2/302 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P T  FN LI   CK   L+  F + K M+++++ YP++ TYS LI GLCK GR   A
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRI-YPDVFTYSVLIHGLCKEGRLDVA 312

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF+EM  +  + P+ +T+  LIDG  R  ++D A      M   G  P++  Y TL+N
Sbjct: 313 EQLFDEMQQRG-LRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLN 371

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G + +A+++ DEMK   +KPD I YTTLI+ +C+ G ++ A+E+ K M E G   
Sbjct: 372 GLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V F  ++ G CR+G++ +A   L ++   G+  + A+Y +V++  C+KG ++   +LL
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M   G  P   T N L+  LCK G  ++A + L  ++ +G  P+  ++ +L+E  C+ 
Sbjct: 492 KEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKN 551

Query: 498 RK 499
            K
Sbjct: 552 GK 553



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 179/306 (58%), Gaps = 5/306 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +P+  + +T +N L +S  +D  + F LK + +  R+ P+   +++LI   CK G L+ A
Sbjct: 255 RPTTVSFNTLINGLCKSRNLD--EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++  EM++  +  PN IT++ LIDG  ++ R   A+  + +M++   + PD + YN L+
Sbjct: 313 EQLFDEMQQRGLR-PNGITFTALIDGQYRSRRMDSAMNTYHQMLTMG-VKPDLVMYNTLL 370

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           +G C+ G V++A+K+++ MK  G  P+   YTTL++G+CKEG L+ A E+   M    + 
Sbjct: 371 NGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + +T LI+ FCR GRV +A   L+EM E G K D  T+ +++ G C++G ++    +
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L+++  +G      +Y +++N  C++G+++ A  LL  ML  G  P   T N LL   CK
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK 550

Query: 462 AGMAED 467
            G AED
Sbjct: 551 NGKAED 556



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 159/277 (57%), Gaps = 1/277 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +  Y+ LI+  CK G  R+A  +F E + K  + P  +++N LI+G C+   +D   +
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNE-IRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M+ N   P+VF Y+ L++G CKEG+L  A+++FDEM+   L+P+ I +T LI+   
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQY 339

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R+ R+D A+    +M   G K D+V +N +L GLC+ G + +A  +++++   G+  +K 
Sbjct: 340 RSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKI 399

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++G+LE A+E+ + M   G +        L+   C+ G   DA   L  +
Sbjct: 400 TYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM 459

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           VE G KP+  ++ ++++  C+   +   F+LL E+ I
Sbjct: 460 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 109/203 (53%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P V  Y  L+N FCKEG +++AK +F+E++   L+P T+ + TLIN  C++  +DE 
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             L K M+E     D+ T+++++ GLC+EG+++ A  + +++   G+  N  ++  +++ 
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             +   ++ A+     ML  G  P     N LL  LCK G    A   +  +  +G KP+
Sbjct: 338 QYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPD 397

Query: 484 SDSWALLVELICRGRKLLFAFEL 506
             ++  L++  C+   L  A E+
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEI 420



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 92/179 (51%)

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           + E+  +   P    Y  LIN FC+ G + +A  +  E+++RG +   V+FN ++ GLC+
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
              ++E   + + +  + IY +  +Y ++++  C++G L+ A +L   M  RG  P+  T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              L+    ++   + A      ++ MG KP+   +  L+  +C+   +  A +L+DE+
Sbjct: 331 FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 9/159 (5%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E + + A+EI   ++E+ G   +N  +  ++    R  +    +  LR+M     K  + 
Sbjct: 411 EGDLESAMEIRKGMNEE-GVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDA 469

Query: 132 IFLNLMKHF---SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            +  ++  +    N  +  ++L+       I   KP +   +  +N L +  Q+  A N 
Sbjct: 470 TYTMVIDGYCKKGNVKMGFKLLKEMQ----INGHKPGVITYNVLMNGLCKQGQMKNA-NM 524

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           L  +  +L + P+   +NIL++ HCK G  E   ++  E
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/298 (37%), Positives = 178/298 (59%), Gaps = 2/298 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN   +N +I   CK G ++ A  VL+EM  +Q   P+ + Y+TLIDG CK G  + A
Sbjct: 41  LKPNLYTYNSIILLLCKSGKVDDAERVLREMI-NQGIVPDTVVYTTLIDGFCKLGNIQAA 99

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF+EM  K +I+PD + Y  +I G CR GK+  A K+   M + G  P+   YTTL++
Sbjct: 100 YKLFDEM-EKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLID 158

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK G++++A  + ++M    L P+ + YT L +  C+ G+VD A ELL EM  +G + 
Sbjct: 159 GYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQL 218

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I T+N ++ GLC+ G I +A+ ++E++   G+Y +  ++  +++  C+ GE+ KA ELL
Sbjct: 219 NICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELL 278

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           R ML RG  P   T N L+   C +GM ED    L  ++E G  P + ++  L++  C
Sbjct: 279 REMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYC 336



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 199/376 (52%), Gaps = 39/376 (10%)

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK-YSNQHLRLKPNTCIF 205
           ++VL++  ++  +   KP+L   ++ + LL +S +VD A+  L+   NQ +   P+T ++
Sbjct: 27  QKVLKLIQEMQ-MKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIV--PDTVVY 83

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQM-----SY------------------------- 235
             LI   CK G +++A+++  EM+K ++     +Y                         
Sbjct: 84  TTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFS 143

Query: 236 ----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
               P+ +TY+TLIDG CK+G   +A  L  +MV +  + P+ +TY  L DG C+ G+VD
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV-QSGLTPNVVTYTALADGLCKLGQVD 202

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A +++  M   G   N+  Y +L+NG CK G +++A ++ +EM+   + PDTI +TTL+
Sbjct: 203 TANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLM 262

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           + +C+ G + +A ELL+EM +RG +  ++TFN+++ G C  G +E+   +L  +   GI 
Sbjct: 263 DAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIM 322

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y  ++   C +  +    E+ + M  RG +P   T N L+   CKA   ++A   
Sbjct: 323 PNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFL 382

Query: 472 LFGLVEMGFKPESDSW 487
              + E GF   + S+
Sbjct: 383 HKEMAEKGFNLTASSY 398



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 162/276 (58%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++++YST+I+G C  G  ++ ++L +EM  K  + P+  TYN +I   C+ GKVD A++
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG-LKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M N G  P+   YTTL++GFCK G +Q A ++FDEM+   + PD I YT +I   C
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R G++ EA ++  +M  RG + D VT+  ++ G C+ G++E+A  +  ++   G+  N  
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  + +  C+ G+++ A ELL  M  +G   +  T N L+  LCK+G    A   +  +
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              G  P++ ++  L++  C+  +++ A ELL E++
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML 282



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 206/427 (48%), Gaps = 8/427 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + KG   N  TY +I+  L +  K +  + VLR+M  +       ++  L+  F      
Sbjct: 37  QMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNI 96

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCI 204
           +   ++F ++    R  P   A +  +  L    ++  A    K  N+     ++P+   
Sbjct: 97  QAAYKLFDEMEK-QRIVPDFIAYTAVICGLCRCGKMMEAD---KVFNKMFSRGVEPDEVT 152

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI  +CK G +E AF +  +M +S ++ PN++TY+ L DGLCK G+   A EL  EM
Sbjct: 153 YTTLIDGYCKSGEMEKAFSLHNQMVQSGLT-PNVVTYTALADGLCKLGQVDTANELLHEM 211

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K   L +  TYN L++G C+ G + +A K+ME M+  G  P+   +TTLM+ +CK G+
Sbjct: 212 CGKGLQL-NICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A E+  EM +  L+P  I +  L+N FC +G +++   LL  M E+G   +  T+N 
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C    +     + + +   G+  +  +Y I++   C+   +++A  L + M  +G
Sbjct: 331 LMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           F    ++ N ++    K     +A      +   G   +++ + L V++      +  A 
Sbjct: 391 FNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETAL 450

Query: 505 ELLDELV 511
           EL DE +
Sbjct: 451 ELCDEAI 457



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 137/241 (56%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD ++Y+ +I+G+C GG++ +  K+++ M+  G  PN++ Y +++   CK GK+ +A+ V
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             EM N  + PDT+ YTTLI+ FC+ G +  A +L  EM+++    D + +  ++ GLCR
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            GK+ EA  +  K++  G+  ++ +Y  +++  C+ GE+EKA  L   M+  G  P+  T
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L   LCK G  + A   L  +   G +    ++  LV  +C+   +  A +L++E+ 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 512 I 512
           +
Sbjct: 248 V 248



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 4/285 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  + D L +  + +  + +L +M  +  + +   + +L+          
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIR 237

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +++  ++  +    P     +T ++   ++ ++  A   L+       L+P    FN+
Sbjct: 238 QAVKLMEEME-VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR-GLQPTVITFNV 295

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G LE    +L  M +  +  PN  TY++L+   C     R   E+++ M ++
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGI-MPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             ++PD+ TYN+LI G C+   +  A  + + M   G N    +Y +++ GF K+ K+ E
Sbjct: 355 G-VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISE 413

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           A+E+F+EM+   +  D   Y   ++     G ++ ALEL  E  E
Sbjct: 414 ARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 231/443 (52%), Gaps = 3/443 (0%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           F S  +  +L   E +     +IF + S+   +   ++T+ ++++  A    F  +  V 
Sbjct: 28  FFSFRSKTTLSPYESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVF 87

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
            +M  E   F E  F+ + + +    L E+ +E+F ++    + + ++++ ++ LN++I+
Sbjct: 88  DRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQ 147

Query: 179 SNQVDLAQNFLKYS-NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
                 A  F +        + PN   FN++IK  CK G ++ A EV +EM   Q   P+
Sbjct: 148 EGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMA-IQKCEPD 206

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + TY TL+DGLCK  R  EA+ L +EM   +   P ++T+NVLI+G C+ G + R  K++
Sbjct: 207 VFTYCTLMDGLCKEDRIDEAVLLLDEM-QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLV 265

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   GC PN   Y T++NG C +GKL +A  + D M      P+ + Y TLIN   + 
Sbjct: 266 DNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQ 325

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           GR  + + LL  ++ERG  A+   ++ ++ GL +E K EEA+G+ +K+   G   N   Y
Sbjct: 326 GRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVY 385

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++  C++G+L++A E+L  M+ +G  P+  T + L+    K G ++ A      + +
Sbjct: 386 SALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 445

Query: 478 MGFKPESDSWALLVELICRGRKL 500
               P    +++L+  +C   KL
Sbjct: 446 NNCVPNEICYSVLIHGLCEDGKL 468



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 214/451 (47%), Gaps = 38/451 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F  ++ QK    +  TY T++D L +  + +    +L +M  E C F   +  N++
Sbjct: 191 AIEVFREMAIQK-CEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGC-FPSSVTFNVL 248

Query: 138 -----KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
                K      + + V  MF K        P+    +T +N L    ++D A + L   
Sbjct: 249 INGLCKKGDMVRVTKLVDNMFLK-----GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 303

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
               +  PN   +  LI    K+G       +L  +++ +  + N   YSTLI GL K  
Sbjct: 304 VAS-KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE-RGHHANEYAYSTLISGLFKEE 361

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EA+ L+++MV K    P+ + Y+ LIDG CR GK+D AK+I+  M N GC PN F Y
Sbjct: 362 KSEEAMGLWKKMVEKG-CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 420

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           ++L+ GF K G  Q+A  V+ EM      P+ I Y+ LI+  C  G++ EA+ +   M  
Sbjct: 421 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 480

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLW--YDGIYLNKASYRIVLNFSCQKGEL 430
           RG + D+V ++ ++ GLC  G +E  L +  ++         +  +Y I+L   C++  +
Sbjct: 481 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 540

Query: 431 EKAIELLRLMLCRGFLPHYATSN---------------------ELLVRLCKAGMAEDAA 469
             AI+LL  ML RG  P   T N                     EL+VRL K      AA
Sbjct: 541 SHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAA 600

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +  +++    P + +W  ++  +C+ +K+
Sbjct: 601 KIIEVMLQKFLPPNASTWERIIPELCKPKKV 631



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 163/310 (52%), Gaps = 1/310 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F ++ + + K    E A E+   M         + +++++++ + + G F  A+E +E  
Sbjct: 102 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECG 161

Query: 265 VS-KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           V  K  I P+ L++N++I   C+ G VDRA ++   M    C P+VF Y TLM+G CKE 
Sbjct: 162 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 221

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++ EA  + DEM+     P ++ +  LIN  C+ G +    +L+  M  +GC  + VT+N
Sbjct: 222 RIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYN 281

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            I+ GLC +GK+++A+ +L+++       N  +Y  ++N   ++G     + LL  +  R
Sbjct: 282 TIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 341

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G   +    + L+  L K   +E+A      +VE G +P    ++ L++ +CR  KL  A
Sbjct: 342 GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEA 401

Query: 504 FELLDELVIK 513
            E+L E+V K
Sbjct: 402 KEILCEMVNK 411



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 127/291 (43%), Gaps = 32/291 (10%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           ++   IS +  E++ + A+ ++  + E KG   N   Y+ ++D L R  K +    +L +
Sbjct: 349 AYSTLISGLFKEEKSEEAMGLWKKMVE-KGCQPNIVVYSALIDGLCREGKLDEAKEILCE 407

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           M  + C  +   + +L+K F      ++ + ++ ++      K +      C ++LI   
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM-----AKNNCVPNEICYSVLIHGL 462

Query: 181 QVD--LAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYP 236
             D  L +  + +++   R L+P+   ++ +I   C  G++E   ++  EM  +   S P
Sbjct: 463 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF------------ 284
           +++TY+ L+  LCK      AI+L   M+ +    PD +T N+ ++              
Sbjct: 523 DVVTYNILLRALCKQNSISHAIDLLNSMLDRG-CNPDLITCNIFLNALREKLNPPQDGRE 581

Query: 285 ------CRGGKVDR---AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                  R  K  R   A KI+E M      PN   +  ++   CK  K+Q
Sbjct: 582 FLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 222/431 (51%), Gaps = 10/431 (2%)

Query: 90   GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
            G+  N  T +++L+     K+     A++ QM + T      +  N + H     LH + 
Sbjct: 760  GYEPNIVTLSSLLNGYCHSKRISEAVALVDQM-FVTGYQPNTVTFNTLIH--GLFLHNKA 816

Query: 150  LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             E    I  +  +  +P L      +N L +    DLA N L    Q  +L+P   I+N 
Sbjct: 817  SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNT 875

Query: 208  LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            +I   CK   ++ A  + KEM+   +  PN++TYS+LI  LC  GR+ +A  L  +M+ +
Sbjct: 876  IIDGLCKYKHMDDALNLFKEMETKGIR-PNVVTYSSLISCLCNYGRWSDASRLLSDMIER 934

Query: 268  DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             +I PD  T++ LID F + GK+  A+K+ + M     +P++  Y++L+NGFC   +L E
Sbjct: 935  -KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993

Query: 328  AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
            AK++F+ M +    PD + Y TLI  FC+  RV+E +E+ +EM +RG   + VT+NI++ 
Sbjct: 994  AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053

Query: 388  GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            GL + G  + A  + +++  DG+  N  +Y  +L+  C+ G+LEKA+ +   +      P
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113

Query: 448  HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
               T N ++  +CKAG  ED       L   G KP+  ++  ++   CR      A  L 
Sbjct: 1114 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173

Query: 508  DELVIKESGTI 518
             E+  KE GT+
Sbjct: 1174 KEM--KEDGTL 1182



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 223/430 (51%), Gaps = 6/430 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+ + + + F  +   +  +L  + + KK++ V ++ ++M     +     F  ++
Sbjct: 172 AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 230

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F  C      L +  K+  +  E P    I + +N     N+V  A + +      + 
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVD-KMVEIG 288

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+   +N +I   CK   +  AF+  KE+++  +  PN++TY+ L++GLC + R+ +A
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR-PNVVTYTALVNGLCNSSRWSDA 347

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L  +M+ K +I P+ +TY+ L+D F + GKV  AK++ E M     +P++  Y++L+N
Sbjct: 348 ARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C   ++ EA ++FD M +     D + Y TLIN FC+A RV++ ++L +EM +RG  +
Sbjct: 407 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 466

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VT+N ++ G  + G +++A     ++ + GI  +  +Y I+L   C  GELEKA+ + 
Sbjct: 467 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 526

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  R       T   ++  +CK G  E+A      L   G KP+  ++  ++  +C  
Sbjct: 527 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT- 585

Query: 498 RKLLFAFELL 507
           + LL   E L
Sbjct: 586 KGLLHEVEAL 595



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 175/336 (52%), Gaps = 9/336 (2%)

Query: 181 QVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
           QV LA + L    + L+L  +P+      L+   C+R  +  A  ++ +M   ++ Y P+
Sbjct: 238 QVSLALSIL---GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM--VEIGYKPD 292

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+ +ID LCK  R  +A + F+E + +  I P+ +TY  L++G C   +   A +++
Sbjct: 293 IVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M      PNV  Y+ L++ F K GK+ EAKE+F+EM    + PD + Y++LIN  C  
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 411

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            R+DEA ++   M  +GC AD+V++N ++ G C+  ++E+ + +  ++   G+  N  +Y
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 471

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++    Q G+++KA E    M   G  P   T N LL  LC  G  E A +    + +
Sbjct: 472 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 531

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                +  ++  ++  +C+  K+  A+ L   L +K
Sbjct: 532 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 208/418 (49%), Gaps = 15/418 (3%)

Query: 39   KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
            KA   +   D  V    +   +++G  ++ +    +   A  + N + EQ         Y
Sbjct: 815  KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIY 873

Query: 99   ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK---HFSNCSLHERVL-EMFH 154
             TI+D L +YK  +    + ++M  +  + +   + +L+    ++   S   R+L +M  
Sbjct: 874  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933

Query: 155  KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHC 213
            +     +  P +   S  ++  ++  ++  A+    Y     R + P+   ++ LI   C
Sbjct: 934  R-----KINPDVFTFSALIDAFVKEGKLVEAEKL--YDEMVKRSIDPSIVTYSSLINGFC 986

Query: 214  KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
                L+ A ++  E   S+  +P+++TY+TLI G CK  R  E +E+F EM S+  ++ +
Sbjct: 987  MHDRLDEAKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGN 1044

Query: 274  ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
             +TYN+LI G  + G  D A++I + M ++G  PN+  Y TL++G CK GKL++A  VF+
Sbjct: 1045 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 1104

Query: 334  EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
             ++   ++P    Y  +I   C+AG+V++  +L   +  +G K D+V +N ++ G CR+G
Sbjct: 1105 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 1164

Query: 394  KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
              EEA  + +++  DG   N   Y  ++    + G+ E + EL++ M   GF    +T
Sbjct: 1165 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 1222



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 205/442 (46%), Gaps = 35/442 (7%)

Query: 90   GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLH 146
            G+  N  T+ T++  L  + K     A++ +M  + C+      G+ +N +    +  L 
Sbjct: 795  GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 147  ERVLEMFH--KIHP-------ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--- 194
              +L      K+ P       I       K +   LNL  E     +  N + YS+    
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 195  ------------------HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
                                ++ P+   F+ LI    K G L  A ++  EM K  +  P
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID-P 973

Query: 237  NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
            +++TYS+LI+G C + R  EA ++FE MVSK    PD +TYN LI GFC+  +V+   ++
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032

Query: 297  MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
               M   G   N   Y  L+ G  + G    A+E+F EM +  + P+ + Y TL++  C+
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092

Query: 357  AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
             G++++A+ + + ++    +  I T+NI++ G+C+ GK+E+   +   L   G+  +  +
Sbjct: 1093 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 1152

Query: 417  YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
            Y  +++  C+KG  E+A  L + M   G LP+    N L+    + G  E +A  +  + 
Sbjct: 1153 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 1212

Query: 477  EMGFKPESDSWALLVELICRGR 498
              GF  ++ +  L+  ++  GR
Sbjct: 1213 SCGFAGDASTIGLVTNMLHDGR 1234



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 171/329 (51%), Gaps = 13/329 (3%)

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           +RV + F     I R+  +P++   +  +N L  S++   A   L    +  ++ PN   
Sbjct: 307 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVIT 365

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ L+    K G +  A E+ +EM +  +  P+++TYS+LI+GLC + R  EA ++F+ M
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLINGLCLHDRIDEANQMFDLM 424

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSK   L D ++YN LI+GFC+  +V+   K+   M   G   N   Y TL+ GF + G 
Sbjct: 425 VSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A+E F +M  F + PD   Y  L+   C  G +++AL + ++M++R    DIVT+  
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G+C+ GK+EEA  +   L   G+  +  +Y  +++  C KG L +   L   M   G
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603

Query: 445 FLPHYAT--------SNELLVRLCKAGMA 465
            + +  T        S EL+ ++   G A
Sbjct: 604 LMKNDCTLSDGDITLSAELIKKMLSCGYA 632



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 159/295 (53%), Gaps = 4/295 (1%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-DALT 276
           L+ A  +  EM KS+  +P++I +S L+  + K  +F   I L E+M  ++  +P +  T
Sbjct: 676 LDDAVALFGEMVKSR-PFPSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYT 732

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y++LI+ FCR  ++  A  ++  M   G  PN+   ++L+NG+C   ++ EA  + D+M 
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +P+T+ + TLI+      +  EA+ L+  M  +GC+ D+VT+ +++ GLC+ G  +
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A  +L K+    +      Y  +++  C+   ++ A+ L + M  +G  P+  T + L+
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LC  G   DA+  L  ++E    P+  +++ L++   +  KL+ A +L DE+V
Sbjct: 913 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 1/261 (0%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI+LF +MV K +  P  + +N L+    +  K D    + + M+  G   +++ +
Sbjct: 168 KLNDAIDLFSDMV-KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 226

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             ++N FC   ++  A  +  +M     +PD +   +L+N FCR  RV +A+ L+ +M E
Sbjct: 227 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 286

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G K DIV +N I+  LC+  ++ +A    +++   GI  N  +Y  ++N  C       
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  LL  M+ +   P+  T + LL    K G   +A      +V M   P+  +++ L+ 
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406

Query: 493 LICRGRKLLFAFELLDELVIK 513
            +C   ++  A ++ D +V K
Sbjct: 407 GLCLHDRIDEANQMFDLMVSK 427



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/508 (20%), Positives = 206/508 (40%), Gaps = 97/508 (19%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY+++++ L  + + +  + +   M  + C      +  L+  F      E  +++F +
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458

Query: 156 IHPITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +      +  L + +   N LI+    +  VD AQ F    +    + P+   +NIL+  
Sbjct: 459 M-----SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD-FFGISPDIWTYNILLGG 512

Query: 212 HCKRGTLESAFEVLKEMKKSQMSY----------------------------------PN 237
            C  G LE A  + ++M+K +M                                    P+
Sbjct: 513 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEM-----VSKDQILPDA----------------LT 276
           ++TY+T++ GLC  G   E   L+ +M     +  D  L D                   
Sbjct: 573 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYA 632

Query: 277 YNVLID---GFC-----------------------RGG----KVDRAKKIMEFMKNNGCN 306
            ++L D   G C                       R G    K+D A  +   M  +   
Sbjct: 633 PSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPF 692

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++  ++ L++   K  K      + ++M+N  +  +   Y+ LINCFCR  ++  AL +
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M + G + +IVT + +L G C   +I EA+ ++++++  G   N  ++  +++    
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESD 485
             +  +A+ L+  M+ +G  P   T   ++  LCK G   D A  L   +E G  +P   
Sbjct: 813 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG-DTDLAFNLLNKMEQGKLEPGVL 871

Query: 486 SWALLVELICRGRKLLFAFELLDELVIK 513
            +  +++ +C+ + +  A  L  E+  K
Sbjct: 872 IYNTIIDGLCKYKHMDDALNLFKEMETK 899



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 92/194 (47%)

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++ KL +A ++F +M      P  + +  L++   +  + D  + L K+M+  G + D+ 
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TFNI++   C   ++  AL +L K+   G   ++ +   ++N  C++  +  A+ L+  M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           +  G+ P     N ++  LCK     DA      +   G +P   ++  LV  +C   + 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 501 LFAFELLDELVIKE 514
             A  LL +++ K+
Sbjct: 345 SDAARLLSDMIKKK 358


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 222/431 (51%), Gaps = 10/431 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  N  T +++L+     K+     A++ QM + T      +  N + H     LH + 
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQM-FVTGYQPNTVTFNTLIH--GLFLHNKA 202

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    I  +  +  +P L      +N L +    DLA N L    Q  +L+P   I+N 
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNT 261

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK   ++ A  + KEM+   +  PN++TYS+LI  LC  GR+ +A  L  +M+ +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIR-PNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I PD  T++ LID F + GK+  A+K+ + M     +P++  Y++L+NGFC   +L E
Sbjct: 321 -KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AK++F+ M +    PD + Y TLI  FC+  RV+E +E+ +EM +RG   + VT+NI++ 
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G  + A  + +++  DG+  N  +Y  +L+  C+ G+LEKA+ +   +      P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N ++  +CKAG  ED       L   G KP+  ++  ++   CR      A  L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 508 DELVIKESGTI 518
            E+  KE GT+
Sbjct: 560 KEM--KEDGTL 568



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 208/418 (49%), Gaps = 15/418 (3%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           KA   +   D  V    +   +++G  ++ +    +   A  + N + EQ         Y
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIY 259

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK---HFSNCSLHERVL-EMFH 154
            TI+D L +YK  +    + ++M  +  + +   + +L+    ++   S   R+L +M  
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHC 213
           +     +  P +   S  ++  ++  ++  A+    Y     R + P+   ++ LI   C
Sbjct: 320 R-----KINPDVFTFSALIDAFVKEGKLVEAEKL--YDEMVKRSIDPSIVTYSSLINGFC 372

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
               L+ A ++  E   S+  +P+++TY+TLI G CK  R  E +E+F EM S+  ++ +
Sbjct: 373 MHDRLDEAKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGN 430

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TYN+LI G  + G  D A++I + M ++G  PN+  Y TL++G CK GKL++A  VF+
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            ++   ++P    Y  +I   C+AG+V++  +L   +  +G K D+V +N ++ G CR+G
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             EEA  + +++  DG   N   Y  ++    + G+ E + EL++ M   GF    +T
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 205/442 (46%), Gaps = 35/442 (7%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLH 146
           G+  N  T+ T++  L  + K     A++ +M  + C+      G+ +N +    +  L 
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 147 ERVLEMFH--KIHP-------ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--- 194
             +L      K+ P       I       K +   LNL  E     +  N + YS+    
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 195 ------------------HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
                               ++ P+   F+ LI    K G L  A ++  EM K  +  P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID-P 359

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           +++TYS+LI+G C + R  EA ++FE MVSK    PD +TYN LI GFC+  +V+   ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVTYNTLIKGFCKYKRVEEGMEV 418

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
              M   G   N   Y  L+ G  + G    A+E+F EM +  + P+ + Y TL++  C+
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++++A+ + + ++    +  I T+NI++ G+C+ GK+E+   +   L   G+  +  +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C+KG  E+A  L + M   G LP+    N L+    + G  E +A  +  + 
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

Query: 477 EMGFKPESDSWALLVELICRGR 498
             GF  ++ +  L+  ++  GR
Sbjct: 599 SCGFAGDASTIGLVTNMLHDGR 620



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 185/387 (47%), Gaps = 38/387 (9%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   S  L+ + + N+ D+  + L    Q+L +  N   ++ILI   C+R  L 
Sbjct: 75  SRPFPSIIEFSKLLSAIAKMNKFDVVIS-LGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSK----------- 267
            A  VL +M K  + Y PN++T S+L++G C + R  EA+ L ++M              
Sbjct: 134 LALAVLGKMMK--LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191

Query: 268 ------------------DQIL-----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
                             D+++     PD +TY V+++G C+ G  D A  ++  M+   
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             P V  Y T+++G CK   + +A  +F EM+   ++P+ + Y++LI+C C  GR  +A 
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            LL +M ER    D+ TF+ ++    +EGK+ EA  + +++    I  +  +Y  ++N  
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C    L++A ++   M+ +   P   T N L+   CK    E+       + + G    +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
            ++ +L++ + +      A E+  E+V
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMV 458



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 157/294 (53%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ A  +  EM KS+  +P++I +S L+  + K  +F   I L E+M +   I  +  TY
Sbjct: 62  LDDAVALFGEMVKSR-PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG-IPHNHYTY 119

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           ++LI+ FCR  ++  A  ++  M   G  PN+   ++L+NG+C   ++ EA  + D+M  
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +P+T+ + TLI+      +  EA+ L+  M  +GC+ D+VT+ +++ GLC+ G  + 
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L K+    +      Y  +++  C+   ++ A+ L + M  +G  P+  T + L+ 
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P+  +++ L++   +  KL+ A +L DE+V
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 112/226 (49%), Gaps = 2/226 (0%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K+D A  +   M  +   P++  ++ L++   K  K      + ++M+N  +  +   Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LINCFCR  ++  AL +L +M + G + +IVT + +L G C   +I EA+ ++++++  
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N  ++  +++      +  +A+ L+  M+ +G  P   T   ++  LCK G   D 
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG-DTDL 239

Query: 469 AIALFGLVEMG-FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A  L   +E G  +P    +  +++ +C+ + +  A  L  E+  K
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 1/194 (0%)

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG   E KL +A  +F EM      P  I ++ L++   +  + D  + L ++M+  G  
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +  T++I++   CR  ++  AL +L K+   G   N  +   +LN  C    + +A+ L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           +  M   G+ P+  T N L+  L     A +A   +  +V  G +P+  ++ ++V  +C+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 497 GRKLLFAFELLDEL 510
                 AF LL+++
Sbjct: 234 RGDTDLAFNLLNKM 247


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 206/373 (55%), Gaps = 20/373 (5%)

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L++FH++      KP++   +T +N L    +V  A   L    +   L+PN   +  ++
Sbjct: 171 LDLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLED-GLQPNQITYGTIV 224

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G   SA  +L++M++     PN++ Y+T+IDGL K+GR  +A  LF EM  K +
Sbjct: 225 DGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEK-E 283

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I PD +TYN +I+GFC  G+   A+++++ M     NP+V  ++ L+N F KEGK  EA+
Sbjct: 284 IFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAE 343

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E++DEM    + P T+ Y+++I+ FC+  R+D A  +      +GC  DI+TFN ++ G 
Sbjct: 344 ELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGY 403

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           CR  ++++ + +L ++   G+  N  +Y  +++  CQ G+L  A +LL+ M+  G  P+ 
Sbjct: 404 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNV 463

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEM------------GFKPESDSWALLVELICRG 497
            T N LL  LC  G  +D A+ +F  ++             G +P+  ++ +L+  +   
Sbjct: 464 VTCNTLLDGLCDNGKLKD-ALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINE 522

Query: 498 RKLLFAFELLDEL 510
            K L A EL +E+
Sbjct: 523 GKFLEAEELYEEM 535



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 219/448 (48%), Gaps = 57/448 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ + +      N  T+ T+++ L R  +     A+L +M  +  + ++  +  ++
Sbjct: 170 ALDLFHQMCKP-----NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIV 224

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                       L +  K+  ++   P++   +T ++ L +  +   A N L    Q   
Sbjct: 225 DGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHN-LFIEMQEKE 283

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N +I   C  G    A ++L+EM + +++ P+++T+S LI+   K G+F EA
Sbjct: 284 IFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN-PDVVTFSALINAFVKEGKFFEA 342

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL++EM+ +  I+P  +TY+ +IDGFC+  ++D A+ +       GC+P++  + TL+ 
Sbjct: 343 EELYDEMLPR-SIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIA 401

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C+  ++ +  ++  EM    L  +TI YTTLI+ FC+ G ++ A +LL+EM   G   
Sbjct: 402 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461

Query: 378 DIVTFNIILGGLCREGKIEEALGML----------------------------------- 402
           ++VT N +L GLC  GK+++AL M                                    
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLIN 521

Query: 403 -----------EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
                      E++ + GI  +  +Y  +++  C++  L++A ++   M  + F P   T
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVT 581

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMG 479
            N L+   CKAGM +D  + LF   EMG
Sbjct: 582 FNTLITGYCKAGMVDD-GLELF--CEMG 606



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 186/360 (51%), Gaps = 13/360 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++  N +  T++ +++   +  KF   + +  +M   +       + +++  F   +  +
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLD 375

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
               MF+ + P     P +   +T +     + +VD     L +      L  NT  +  
Sbjct: 376 AAEHMFY-LTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL-HEMTEAGLVANTITYTT 433

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   C+ G L +A ++L+EM  S +  PN++T +TL+DGLC NG+ ++A+E+F+ M   
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVC-PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492

Query: 268 ----------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
                     + + PD  TYN+LI G    GK   A+++ E M + G  P+   Y+++++
Sbjct: 493 KMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+ +L EA ++FD M +    PD + + TLI  +C+AG VD+ LEL  EM +RG  A
Sbjct: 553 GLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVA 612

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D +T+  ++ G  +   I+ AL + +++   G+Y +  + R +L     K ELE+A+ +L
Sbjct: 613 DAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAML 672



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 7/317 (2%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L   P    FN L+   C    +  A ++  +M K     PN++T++TL++GLC+ GR  
Sbjct: 145 LGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVV 199

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + M+ +D + P+ +TY  ++DG C+ G    A  ++  M+  +   PNV  Y T
Sbjct: 200 EAVALLDRML-EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNT 258

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G  K+G+  +A  +F EM+   + PD + Y  +IN FC +GR  +A +LL+EM ER 
Sbjct: 259 IIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK 318

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+VTF+ ++    +EGK  EA  + +++    I  +  +Y  +++  C++  L+ A 
Sbjct: 319 INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +  L   +G  P   T N L+   C+A   +D    L  + E G    + ++  L+   
Sbjct: 379 HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 438

Query: 495 CRGRKLLFAFELLDELV 511
           C+   L  A +LL E++
Sbjct: 439 CQVGDLNAAQDLLQEMI 455



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 174/335 (51%), Gaps = 17/335 (5%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS    S+ ++   + N++D A++   Y        P+   FN LI  +C+   ++   +
Sbjct: 356 PSTVTYSSMIDGFCKQNRLDAAEHMF-YLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIK 414

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM ++ +   N ITY+TLI G C+ G    A +L +EM+S   + P+ +T N L+DG
Sbjct: 415 LLHEMTEAGL-VANTITYTTLIHGFCQVGDLNAAQDLLQEMISS-GVCPNVVTCNTLLDG 472

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L+ G   EGK  EA+E++
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELY 532

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +    D+VTFN ++ G C+ 
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE-LEKAIELLRLMLCRGFLPHYAT 451
           G +++ L +  ++   GI  +  +Y I L +  +K + ++ A+++ + M+  G  P   T
Sbjct: 593 GMVDDGLELFCEMGQRGIVADAITY-ITLIYGFRKVDNIDGALDIFQEMISSGVYPDTIT 651

Query: 452 SNELLVRLCKAGMAEDAAIALFGL-VEMGFKPESD 485
              +L  L      E A   L  L + +G++ E +
Sbjct: 652 IRNMLTGLWSKEELERAVAMLEDLQMSVGYQLEDE 686



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 162/324 (50%), Gaps = 17/324 (5%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           +  TY++++D   +  + +A + +      + C      F  L+  +      +RV +  
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRA---KRVDDGI 413

Query: 154 HKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
             +H +T        I+  T ++   +   ++ AQ+ L+       + PN    N L+  
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISS-GVCPNVVTCNTLLDG 472

Query: 212 HCKRGTLESAFEVLKEMKKSQMSY----------PNLITYSTLIDGLCKNGRFREAIELF 261
            C  G L+ A E+ K M+KS+M            P++ TY+ LI GL   G+F EA EL+
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELY 532

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           EEM  +  I+PD +TY+ +IDG C+  ++D A ++ + M +   +P+V  + TL+ G+CK
Sbjct: 533 EEMPHR-GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCK 591

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G + +  E+F EM    +  D I Y TLI  F +   +D AL++ +EM   G   D +T
Sbjct: 592 AGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTIT 651

Query: 382 FNIILGGLCREGKIEEALGMLEKL 405
              +L GL  + ++E A+ MLE L
Sbjct: 652 IRNMLTGLWSKEELERAVAMLEDL 675



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 6/257 (2%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI+LF  MV + + LP  + +  L+    R G+ D    + + M+      N +++T L
Sbjct: 64  DAIDLFGYMV-RSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTIL 122

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M  FC   KL  A   F ++      P  + + TL++  C   R+ EAL+L  +M    C
Sbjct: 123 MKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----C 178

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           K ++VTF  ++ GLCREG++ EA+ +L+++  DG+  N+ +Y  +++  C+ G+   A+ 
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238

Query: 436 LLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           LLR M      +P+    N ++  L K G   DA      + E    P+  ++  ++   
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298

Query: 495 CRGRKLLFAFELLDELV 511
           C   +   A +LL E++
Sbjct: 299 CISGRWSDAEQLLQEML 315



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 4/184 (2%)

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L  GF     +D A  +  +M  +   P+V ++  LM    + G+      +  +M+   
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           +  +   +T L+ CFC   ++  AL    ++ + G    +VTFN +L GLC E +I EAL
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +  ++       N  ++  ++N  C++G + +A+ LL  ML  G  P+  T   ++  +
Sbjct: 172 DLFHQMCKP----NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 460 CKAG 463
           CK G
Sbjct: 228 CKMG 231


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 217/426 (50%), Gaps = 16/426 (3%)

Query: 103 DKLARYKKFEAVDAVLRQMTYETCKFHEGIFL-NLMKHFSNCSLHERVLEMFHKIHPI-- 159
           DK+ R    E +  ++ +   E   F   I+L  L+         +R  ++ H +  +  
Sbjct: 243 DKVGRAVDEEEIVGLVSKFA-EHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGG 301

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
             E  S  A+ T L    E  ++    N L    + + ++PN   F ILI H CK   ++
Sbjct: 302 VMEAASCNALLTALGRAREFKRM----NTLLAEMKEMDIQPNVVTFGILINHLCKFRRVD 357

Query: 220 SAFEVLKEMKKSQ----MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
            A EV ++M   +    +  P++ITY+TLIDGLCK GR  E + L E M S+ + +P+ +
Sbjct: 358 EALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTV 417

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYN LIDG+C+   ++ A+++ + M  +G  PNV    TL++G CK G++  A E F+EM
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM 477

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +   LK + + YT LI  FC    +++A+EL  EM E GC  D + +  ++ GL + GK+
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKL 537

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           + A  +L K+   G   +  S+ +++N  C+K +L++A E+L+ M   G  P   T N L
Sbjct: 538 DRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTL 597

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           +    K G    A   +  +V+ G  P   ++  L+   C    L  A ++  ++    S
Sbjct: 598 ISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM----S 653

Query: 516 GTIQVP 521
            T +VP
Sbjct: 654 STSKVP 659



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 219/422 (51%), Gaps = 9/422 (2%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
           A+   +L  L R ++F+ ++ +L +M     + +   F  L+ H       +  LE+F K
Sbjct: 306 ASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEK 365

Query: 156 IHPITRE----KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           ++         +P +   +T ++ L +  + +     ++      R  PNT  +N LI  
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDG 425

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
           +CK   +E+A E+  +M K  +  PN++T +TL+DG+CK+GR   A+E F EM  K  + 
Sbjct: 426 YCKASMIEAARELFDQMNKDGVP-PNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG-LK 483

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
            +A+TY  LI  FC    +++A ++ + M   GC+P+   Y TL++G  + GKL  A  V
Sbjct: 484 GNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFV 543

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             +MK     PD + +  LIN FCR  ++DEA E+LKEM+  G K D VT+N ++    +
Sbjct: 544 LSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSK 603

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PHYA 450
            G    A  +++K+  +G+     +Y  +++  C  G L++A+++ R M     + P+  
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTV 663

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDE 509
             N L+  LC+     D A++L   +++ G KP ++++  + + +     L  AFEL+D 
Sbjct: 664 IYNILINSLCRKNQV-DLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDR 722

Query: 510 LV 511
           + 
Sbjct: 723 MT 724



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 157/320 (49%), Gaps = 6/320 (1%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           + A E+F+ ++ + G   N  T  T++D + ++ +         +M  +  K +   +  
Sbjct: 433 EAARELFDQMN-KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L++ F N +  E+ +E+F ++       P      T ++ L ++ ++D A +F+    + 
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLE-AGCSPDAIVYYTLISGLSQAGKLDRA-SFVLSKMKE 549

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+   FN+LI   C++  L+ A+E+LKEM+ + +  P+ +TY+TLI    K G F 
Sbjct: 550 AGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIK-PDGVTYNTLISHFSKTGDFS 608

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTT 314
            A  L ++MV K+ ++P  +TY  LI  +C  G +D A KI   M +     PN   Y  
Sbjct: 609 TAHRLMKKMV-KEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+N  C++ ++  A  + D+MK   +KP+T  +  +         + +A EL+  M E  
Sbjct: 668 LINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA 727

Query: 375 CKADIVTFNIILGGLCREGK 394
           C  D +T  I+   L   G+
Sbjct: 728 CNPDYITMEILTEWLSAVGE 747



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 188/385 (48%), Gaps = 30/385 (7%)

Query: 146 HERVLEMF-----HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
           H ++L++F     HKI P+     S+ A +  +     +  VD  ++FL Y N+    + 
Sbjct: 140 HNKLLDLFKTSKSHKI-PL-----SVNAATLLIRCFGRAQMVD--ESFLVY-NELCPSRR 190

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIE 259
            T I NILI    ++G ++ A  +L EM + +  +P N  T   +   L K  +   A++
Sbjct: 191 LTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVD 250

Query: 260 LFEEMV------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EE+V      ++ ++ P+++    LI   CR G+ DRA  ++  +   G      +  
Sbjct: 251 E-EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCN 309

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM--- 370
            L+    +  + +    +  EMK   ++P+ + +  LIN  C+  RVDEALE+ ++M   
Sbjct: 310 ALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGG 369

Query: 371 KERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL-NKASYRIVLNFSCQK 427
           +  G   + D++T+N ++ GLC+ G+ EE LG++E++      + N  +Y  +++  C+ 
Sbjct: 370 ESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKA 429

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDS 486
             +E A EL   M   G  P+  T N L+  +CK G   + A+  F  ++  G K  + +
Sbjct: 430 SMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRI-NGAVEFFNEMQGKGLKGNAVT 488

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           +  L+   C    +  A EL DE++
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEML 513



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 39/287 (13%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E FN + + KG   N  TY  ++         E    +  +M    C     ++  L+
Sbjct: 470 AVEFFNEM-QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLI 528

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
              S     +R   +  K+       P + + +  +N     N++D A   LK   ++  
Sbjct: 529 SGLSQAGKLDRASFVLSKMKEAGFS-PDIVSFNVLINGFCRKNKLDEAYEMLK-EMENAG 586

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+   +N LI H  K G   +A  ++K+M K  +  P ++TY  LI   C NG   EA
Sbjct: 587 IKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL-VPTVVTYGALIHAYCLNGNLDEA 645

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK---------------- 301
           +++F +M S  ++ P+ + YN+LI+  CR  +VD A  +M+ MK                
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFK 705

Query: 302 -------------------NNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
                               + CNP+      L       G+  + K
Sbjct: 706 GLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLK 752


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 228/439 (51%), Gaps = 10/439 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL  F  + +  G   +   Y  +L  L + K+ +   A+L +M    C+ +   + +L+
Sbjct: 63  ALRCFRAM-QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLI 121

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA----QNFLKYSN 193
                 +  +R  E+F  +  +    PS+   +T L+ L  + +++ A    Q  L   +
Sbjct: 122 DGLCKNNEPDRAQELFEHMKSV-ECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS 180

Query: 194 QHL--RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +  R  PN   +++LI   CK   +  A E+L+ MK    S P++ITY+ L+DGLCK 
Sbjct: 181 HDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCS-PDVITYTILVDGLCKE 239

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +   A E+  EM+    + P+ +TYN L+ G CR  +V  A  +M  M   GC PNV  
Sbjct: 240 SKVAAAWEVLREMLDAGCV-PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 298

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y TL++G CK G++++A  +  +M +    PD + Y  LIN  C+A +VDE++ LL+   
Sbjct: 299 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 358

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
             G K D+VT++ ++ GLCR  +++EA  +L  +   G   +   Y  +++  C+ G+++
Sbjct: 359 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD 418

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +A +L  +M   G      T + L+  LCKAG  ++A + L  +V MG  P + ++  L+
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478

Query: 492 ELICRGRKLLFAFELLDEL 510
           + +C    L  A EL++E+
Sbjct: 479 KGLCDLNHLDEAIELVEEM 497



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 189/365 (51%), Gaps = 15/365 (4%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +   +  L       ++D AQ           L PN  + +ILI   CK      A 
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSK-NLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-ILPDALTYNVLI 281
              + M+ S +   + + Y+ L+ GL K  R  +A+ +  EM  +D    P+ +TYN LI
Sbjct: 65  RCFRAMQGSGI-VADTVIYTALLSGLWKEKRLDQALAILHEM--RDHGCEPNVVTYNSLI 121

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM------ 335
           DG C+  + DRA+++ E MK+  C+P++  Y TL++G  + GKL+ A  +F EM      
Sbjct: 122 DGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH 181

Query: 336 -KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
             +    P+ I Y+ LI+  C+A RV +A+ELL+ MK RGC  D++T+ I++ GLC+E K
Sbjct: 182 DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 241

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +  A  +L ++   G   N  +Y  +L+  C+   +  A+ L+R M CRG  P+  T   
Sbjct: 242 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 301

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L+  LCK G  +DA   L  +++ G  P+   + +L+  +C+  ++  +  LL   V   
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV--- 358

Query: 515 SGTIQ 519
           SG I+
Sbjct: 359 SGGIK 363



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 226/501 (45%), Gaps = 83/501 (16%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           EK    AL I + + +  G   N  TY +++D L +  + +    +   M    C     
Sbjct: 92  EKRLDQALAILHEMRDH-GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMV 150

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKI-----HPIT-REKPSLKAISTCLNLLIESNQVDLA 185
            +  L+         ER + +F ++     H +  R  P++   S  ++ L ++N+V  A
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQA 210

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ-----MSY----- 235
              L+ S +     P+   + IL+   CK   + +A+EVL+EM  +      ++Y     
Sbjct: 211 VELLE-SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLH 269

Query: 236 ------------------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
                                   PN++TY TLIDGLCK GR ++A  +  +M+ K    
Sbjct: 270 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT- 328

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD + YN+LI+G C+  +VD +  ++    + G  P+V  Y++++ G C+  +L EA  +
Sbjct: 329 PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 388

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
              +K+    PD I Y+TLI+  C+AG+VDEA +L + M   GC AD+VT++ ++ GLC+
Sbjct: 389 LLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCK 448

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G+++EA  +L ++   G   +  +Y  ++   C    L++AIEL+  M      P   T
Sbjct: 449 AGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVT 508

Query: 452 SN----------------------------------------ELLVRLCKAGMAEDAAIA 471
            N                                         L+  LCKAG   +A   
Sbjct: 509 YNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDY 568

Query: 472 LFGLVEMGFKPESDSWALLVE 492
              +++ G  P+  ++++L+E
Sbjct: 569 FQEMIDNGVIPDHITYSILLE 589



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 160/348 (45%), Gaps = 44/348 (12%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY ++L  L R ++     A++R MT   C  +   +  L+         +  
Sbjct: 256 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 315

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
             M   +       P L   +  +N L +++QVD +   L+ +     +KP+   ++ +I
Sbjct: 316 CAMLADMID-KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG-GIKPDVVTYSSVI 373

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C+   L+ A  +L  +K S+   P++I YSTLIDGLCK G+  EA +L+E M + D 
Sbjct: 374 YGLCRSNRLDEACRLLLYVK-SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM-AGDG 431

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
              D +TY+ LIDG C+ G+VD A  ++  M   G  P+   Y +L+ G C    L EA 
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491

Query: 330 EVFDEMKNFLLKP----------------------------------------DTIGYTT 349
           E+ +EM+     P                                        DTI Y++
Sbjct: 492 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSS 551

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
           LI+  C+AGRV EAL+  +EM + G   D +T++I+L GL +   + E
Sbjct: 552 LIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 122/249 (48%), Gaps = 42/249 (16%)

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP---------------------- 342
           C P+V+ Y  L+ GFC+ G++ +A+  FDEM++  L P                      
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 343 -------------DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
                        DT+ YT L++   +  R+D+AL +L EM++ GC+ ++VT+N ++ GL
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF---- 445
           C+  + + A  + E +       +  +Y  +L+   + G+LE+A+ L + ML R      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 446 ---LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
               P+  T + L+  LCKA     A   L  +   G  P+  ++ +LV+ +C+  K+  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 503 AFELLDELV 511
           A+E+L E++
Sbjct: 245 AWEVLREML 253



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 8/251 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY++++  L R  + +    +L  +    C     ++  L+         +  
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            +++ ++         +   ST ++ L ++ +VD A   L    + +   P+T  +N LI
Sbjct: 421 FDLY-EVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVR-MGTPPSTMTYNSLI 478

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM----V 265
           K  C    L+ A E+++EM++S  + P+ +TY+ LI G+C+  R   A+ L E+     V
Sbjct: 479 KGLCDLNHLDEAIELVEEMERSNCA-PSAVTYNILIHGMCRMERVDSAVVLLEQAKARCV 537

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +      D + Y+ LIDG C+ G+V  A    + M +NG  P+   Y+ L+ G  K   L
Sbjct: 538 AAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 597

Query: 326 QEAKE-VFDEM 335
            E +  V D+M
Sbjct: 598 HELRHLVLDQM 608


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 241/448 (53%), Gaps = 22/448 (4%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA-VDAVLRQMTYETCKFHE 130
           EK P  AL +F + S  K  +H+   +  IL +LA   +  + V  ++  +  + C   E
Sbjct: 23  EKNPLSALSLFESASRNK--SHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKE 80

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
            + L ++K ++   +  + L+ F  +  I   KP +++ +T LN  +E N+ D A++F +
Sbjct: 81  DVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSR 140

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           Y  + + + PN   +NILIK  CK+  +E A  +L  M  SQ   P++ +Y TLI+G+ K
Sbjct: 141 YF-ESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMW-SQNLKPDVFSYGTLINGMVK 198

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME-FMKNNGCNPNV 309
            G    A+++F+EM S   ++ D   YN+LIDGF + G  D+ K+I E  +K+    PNV
Sbjct: 199 VGDLLGALKVFDEM-SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNV 257

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  ++NG CK G+  E+ E+++ M     + D   Y++LI+  C AG +D A+ + KE
Sbjct: 258 VTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKE 317

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK------ASYRIVLNF 423
           + E     D VT N +L G CR GKI+E+     +LW   + + K       SY I++  
Sbjct: 318 IVESSLVVDAVTHNAMLNGFCRAGKIKESF----ELW---MVMGKENCQTVVSYNILIKG 370

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKP 482
             + G++E+AI +  L+  +G  P   T   L+  LCK G   + A+ +F   E G  K 
Sbjct: 371 LFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRL-NKALKIFKEAEDGPGKL 429

Query: 483 ESDSWALLVELICRGRKLLFAFELLDEL 510
           ++ +++ +V+ +C+  ++  A  +++++
Sbjct: 430 DAYAYSSMVDGLCKEGRMDEAISIVNQM 457



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 191/347 (55%), Gaps = 7/347 (2%)

Query: 171 TCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           TC N+LI+        D  +   +   +   + PN   +NI+I   CK G  + + E+ +
Sbjct: 222 TCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWE 281

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
            M K++    ++ TYS+LI GLC+ G    A+ +++E+V +  ++ DA+T+N +++GFCR
Sbjct: 282 RMTKNERE-KDMFTYSSLIHGLCEAGNIDGAVRVYKEIV-ESSLVVDAVTHNAMLNGFCR 339

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            GK+  + ++   M    C   V +Y  L+ G  + GK++EA  +++ +     +P++  
Sbjct: 340 AGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTT 398

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y  LI+  C+ GR+++AL++ KE ++   K D   ++ ++ GLC+EG+++EA+ ++ ++ 
Sbjct: 399 YGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMD 458

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G  L+      ++N   +  +LE AI   R M C+G  P   + N L+  LCKA    
Sbjct: 459 KRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFS 518

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +A   +  ++E  +KP+  + +LL++ +C+ +K+  A  L  + + K
Sbjct: 519 EAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDK 565



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 219/468 (46%), Gaps = 42/468 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ +S  +G   +   Y  ++D   ++  ++    +  ++  +   +   +  N+M
Sbjct: 205 ALKVFDEMS-VRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIM 263

Query: 138 -KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
                 C   +  LE++ ++    REK  +   S+ ++ L E+  +D A    K   +  
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREK-DMFTYSSLIHGLCEAGNIDGAVRVYKEIVES- 321

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ----MSY----------------- 235
            L  +    N ++   C+ G ++ +FE+   M K      +SY                 
Sbjct: 322 SLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAI 381

Query: 236 ------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                       P   TY  LI GLCKNGR  +A+++F+E       L DA  Y+ ++DG
Sbjct: 382 SIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKL-DAYAYSSMVDG 440

Query: 284 FCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            C+ G++D A  I+  M   G   +P+V N   L+NGF +  KL++A   F EM+     
Sbjct: 441 LCKEGRMDEAISIVNQMDKRGYKLDPHVCN--PLINGFVRASKLEDAINFFREMECKGCS 498

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  + Y TLI   C+A R  EA   +KEM E+  K D++T ++++ GLC+E KIE AL +
Sbjct: 499 PTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNL 558

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            ++    G   +   Y I+++  C   +LE A++L   M     +P+  T N L+  L K
Sbjct: 559 WQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYK 618

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
               E A+     +++ G  P+  S+ + ++ +C   ++  A E L++
Sbjct: 619 VRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLND 666



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 142/293 (48%), Gaps = 2/293 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P +  + +LI   CK G L  A ++ KE +       +   YS+++DGLCK GR  EAI
Sbjct: 393 RPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKL-DAYAYSSMVDGLCKEGRMDEAI 451

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +  +M  +   L D    N LI+GF R  K++ A      M+  GC+P + +Y TL+ G
Sbjct: 452 SIVNQMDKRGYKL-DPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKG 510

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK  +  EA     EM     KPD I  + L++  C+  +++ AL L ++  ++G K D
Sbjct: 511 LCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPD 570

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           I  +NI++ GLC   K+E+AL +   +       N  +   ++    +  + EKA E+  
Sbjct: 571 ITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWD 630

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            +L  G  P   + N  +  LC      DA   L   +  G  P + +W +LV
Sbjct: 631 CILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 180/311 (57%), Gaps = 5/311 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+LI  +CK G ++ A +VL+ M  +    P+++TY+T++  LC +G+ +EA+E
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERMSVA----PDVVTYNTILRSLCDSGKLKEAME 230

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + +  + + +  PD +TY +LI+  C    V +A K+++ M+  GC P+V  Y  L+NG 
Sbjct: 231 VLDRQMQR-ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG+L EA +  + M  +  +P+ I +  ++   C  GR  +A  LL +M  +GC   +
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFNI++  LCR+  +  A+ +LEK+   G   N  SY  +L+  CQ+ ++++AIE L +
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T N LL  LCK G A+ A   L  L   G  P   ++  +++ + +  K
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469

Query: 500 LLFAFELLDEL 510
             +A ELL+E+
Sbjct: 470 TEYAAELLEEM 480



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 162/296 (54%), Gaps = 2/296 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N+LI   CK G L+ A + L  M       PN+IT++ ++  +C  GR+ +A 
Sbjct: 276 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQ-PNVITHNIILRSMCSTGRWMDAE 334

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L  +M+ K    P  +T+N+LI+  CR   + RA  ++E M  +GC PN  +Y  L++G
Sbjct: 335 RLLADMLRKG-CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHG 393

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FC+E K+  A E  + M +    PD + Y TL+   C+ G+ D A+E+L ++  +GC   
Sbjct: 394 FCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPV 453

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+N ++ GL + GK E A  +LE++   G+  +  +Y  +L     +G++++AI++  
Sbjct: 454 LITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFH 513

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            M      P   T N +++ LCKA     A   L  +VE G KP   ++ +L+E I
Sbjct: 514 DMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 148/263 (56%), Gaps = 4/263 (1%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L +NG   E ++  E M+ +  I PD +    LI GFCR GK  +A +IME ++N+G  P
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVP 175

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V  Y  L+ G+CK G++ +A +V + M    + PD + Y T++   C +G++ EA+E+L
Sbjct: 176 DVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVL 232

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
               +R C  D++T+ I++   C +  + +A+ +L+++   G   +  +Y +++N  C++
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G L++AI+ L  M   G  P+  T N +L  +C  G   DA   L  ++  G  P   ++
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352

Query: 488 ALLVELICRGRKLLFAFELLDEL 510
            +L+  +CR R L  A ++L+++
Sbjct: 353 NILINFLCRKRLLGRAIDVLEKM 375



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 198/374 (52%), Gaps = 8/374 (2%)

Query: 85  VSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           V E+     +  TY TIL  L    K  EA++ + RQM  E C      +  L++   N 
Sbjct: 199 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE-CYPDVITYTILIEATCND 257

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNT 202
           S   + +++  ++      KP +   +  +N + +  ++D A  FL  +N  L   +PN 
Sbjct: 258 SGVGQAMKLLDEMRK-KGCKPDVVTYNVLINGICKEGRLDEAIKFL--NNMPLYGCQPNV 314

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
              NI+++  C  G    A  +L +M +   S P+++T++ LI+ LC+      AI++ E
Sbjct: 315 ITHNIILRSMCSTGRWMDAERLLADMLRKGCS-PSVVTFNILINFLCRKRLLGRAIDVLE 373

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           +M  K   +P++L+YN L+ GFC+  K+DRA + +E M + GC P++  Y TL+   CK+
Sbjct: 374 KM-PKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 432

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK   A E+ +++ +    P  I Y T+I+   + G+ + A ELL+EM+ +G K DI+T+
Sbjct: 433 GKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITY 492

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           + +L GL  EGK++EA+ +   +    I  +  +Y  ++   C+  +  +AI+ L  M+ 
Sbjct: 493 STLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE 552

Query: 443 RGFLPHYATSNELL 456
           +G  P  AT   L+
Sbjct: 553 KGCKPTKATYTILI 566


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 230/437 (52%), Gaps = 15/437 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+   + +  GF  +  T+  I+  +A     +     LR M    C  +   +  L+
Sbjct: 9   ALELLEEM-KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNVVTYTALI 64

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
             F+     E  +++  ++    RE+   P+L   +  ++ L + + V  AQ+ +K   +
Sbjct: 65  AAFARAKKLEEAMKLLEEM----RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
                PN   FN L+   CKRG ++ A ++L  M    M  PN++TYS LIDGLCK+ +F
Sbjct: 121 G-GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR-PNVVTYSALIDGLCKSQKF 178

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA E+ EEM +   + PDA TY+ LI G C+  K++ A++++  M  +GC P+V  Y++
Sbjct: 179 LEAKEVLEEMKASG-VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++ FCK GKL EA++   EM+     PD + Y T+I+  C+ G++ EA  +L +M+E G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 375 -CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
               D+VT++ ++ GLC+   + EA  +L+++   G   +  +Y  +++  C+ G LE+A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             LL+ M   G  P+  T   L+  LCKA   ++A   +  +   G  P   ++  +V  
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 494 ICRGRKLLFAFELLDEL 510
           +C   ++  A +L+  +
Sbjct: 418 LCVSGRIKEAQQLVQRM 434



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 192/355 (54%), Gaps = 42/355 (11%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  TY+ ++D L + +KF     VL +M                           
Sbjct: 156 KGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM--------------------------- 188

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                 K   +T   P     S  ++ L ++++++ A+  L+         P+  +++ +
Sbjct: 189 ------KASGVT---PDAFTYSALIHGLCKADKIEEAEQMLRRMAGS-GCTPDVVVYSSI 238

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G L  A + L+EM+K + S P+++TY+T+IDGLCK G+  EA  + ++M    
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKS-PDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LPD +TY+ +I+G C+   +  A+K+++ M   GCNP+V  YTT+++G CK G+L+EA
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           + +   MK     P+ + YTTLI+  C+A +VDEA  +++EM+  GC  ++VT+N ++ G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 389 LCREGKIEEALGMLEKLWYDG---IYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           LC  G+I+EA  +++++  DG      + A+YR ++N       +++A +LL  M
Sbjct: 418 LCVSGRIKEAQQLVQRMK-DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 164/306 (53%), Gaps = 7/306 (2%)

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           C  G L +A E+L+EMK +  + P+  T++ +I  +   G    A++    M       P
Sbjct: 1   CNAGDLHAALELLEEMKSAGFA-PDAFTHTPIITAMANAGDLDGAMDHLRSMGCD----P 55

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           + +TY  LI  F R  K++ A K++E M+  GC PN+  Y  L++  CK   +  A++V 
Sbjct: 56  NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            +M      P+ + + +L++ FC+ G VD+A +LL  M  +G + ++VT++ ++ GLC+ 
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
            K  EA  +LE++   G+  +  +Y  +++  C+  ++E+A ++LR M   G  P     
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           + ++   CK+G   +A   L  + +    P+  ++  +++ +C+  K+  A  +LD++  
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM-- 293

Query: 513 KESGTI 518
           +ESG +
Sbjct: 294 QESGDV 299


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 177/299 (59%), Gaps = 2/299 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN LI  +C+   +E  F VLK + +S+   P++ TYS LI+GLCK  R  EA
Sbjct: 257 LRPSVVSFNTLISGYCRSKNVEEGF-VLKSVMESERISPDVFTYSALINGLCKESRVEEA 315

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM     ++P+ +T+  LIDG C+ GK+D A +  E MK+ G  P++  Y  L+N
Sbjct: 316 NGLFDEMCEMG-LVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALIN 374

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C++G L+EA+++ +EM     KPD I +TTL++  C+ G +D ALE+   M E G + 
Sbjct: 375 GLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIEL 434

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V F  ++ GLCR+G++ +A  ML+ +   G   +  +Y +V++  C+KG+++   +LL
Sbjct: 435 DDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLL 494

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           + M   G +P   T N L+   CK G  ++A + L  ++ M   P   ++ +L++  C+
Sbjct: 495 KEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCK 553



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 159/275 (57%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN+  ++ L+ G CK G    A  +F+E +S+  + P  +++N LI G+CR   V+    
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDE-ISRRGLRPSVVSFNTLISGYCRSKNVEEGFV 282

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M++   +P+VF Y+ L+NG CKE +++EA  +FDEM    L P+ + +TTLI+  C
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G++D AL   + MK+RG + D++T+N ++ GLCR+G ++EA  +L ++  +G   +K 
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKI 402

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  +++  C+ G+++ A+E+   M+  G          L+  LC+ G   DA   L  +
Sbjct: 403 TFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDM 462

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  G KP+  ++ ++++  C+   +    +LL E+
Sbjct: 463 LSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 173/310 (55%), Gaps = 7/310 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T ++    S  V+  + F LK   +  R+ P+   ++ LI   CK   +E A
Sbjct: 258 RPSVVSFNTLISGYCRSKNVE--EGFVLKSVMESERISPDVFTYSALINGLCKESRVEEA 315

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-ILPDALTYNVL 280
             +  EM +  +  PN +T++TLIDG CK+G+   A+  FE M  KD+ I PD +TYN L
Sbjct: 316 NGLFDEMCEMGL-VPNGVTFTTLIDGQCKHGKIDLALRNFEIM--KDRGIRPDLITYNAL 372

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I+G CR G +  A+K++  M  NG  P+   +TTLM+G CK+G +  A E+ D M    +
Sbjct: 373 INGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGI 432

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           + D + +T LI+  CR GRV +A  +LK+M   G K D  T+ +++   C++G ++    
Sbjct: 433 ELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAK 492

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +L+++  DG      +Y  ++N  C++G+++ A  LL  ML    +P+  T N LL   C
Sbjct: 493 LLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHC 552

Query: 461 KAGMAEDAAI 470
           K G + D  I
Sbjct: 553 KHGSSVDFKI 562



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 117/208 (56%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  PNV+ +  LM+GFCK G +  A+ VFDE+    L+P  + + TLI+ +CR+  V+E 
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             L   M+      D+ T++ ++ GLC+E ++EEA G+ +++   G+  N  ++  +++ 
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G+++ A+    +M  RG  P   T N L+  LC+ G  ++A   L  ++  GFKP+
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             ++  L++  C+   +  A E+ D +V
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMV 428


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 179/311 (57%), Gaps = 5/311 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+LI  +CK G + SA ++L  M  S    P+++TY+T++  LC +G+ +EA+E
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMSVS----PDVVTYNTILRTLCDSGKLKEAME 233

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + +  + + +  PD +TY +LI+  C+   V +A K+++ M++ GC P+V  Y  L+NG 
Sbjct: 234 VLDRQMQR-ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG+L EA    + M ++  +P+ I +  ++   C  GR  +A + L EM  +GC   +
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFNI++  LCR+G I  A+ +LEK+   G   N  SY  +L+  C+  ++E+AIE L +
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T N LL  LCK G  + A   L  L   G  P   ++  +++ + +  K
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472

Query: 500 LLFAFELLDEL 510
              A +LLDE+
Sbjct: 473 TDDAIKLLDEM 483



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 179/326 (54%), Gaps = 6/326 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N+LI   CK G L+ A   L  M  S    PN+IT++ ++  +C  GR+ +A 
Sbjct: 279 KPDVVTYNVLINGICKEGRLDEAIRFLNHMP-SYGCQPNVITHNIILRSMCSTGRWMDAE 337

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +   EM+ K    P  +T+N+LI+  CR G + RA  ++E M  +GC PN  +Y  L++ 
Sbjct: 338 KFLAEMIRKG-CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHA 396

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ K++ A E  D M +    PD + Y TL+   C+ G+VD A+E+L ++  +GC   
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+N ++ GL + GK ++A+ +L+++   G+  +  +Y  ++    ++G++++AI    
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P+  T N +++ LCKA     A   L  +V  G KP   S+ +L+E +    
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576

Query: 499 KLLFAFELLDEL----VIKESGTIQV 520
               A ELL+EL    V+K+S   QV
Sbjct: 577 LAKEALELLNELCSRGVVKKSSAEQV 602



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 168/298 (56%), Gaps = 5/298 (1%)

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           + G LE  F+ L++M   +   P++I  ++LI GLCK G+  +A  + E ++     +PD
Sbjct: 122 RNGELEEGFKFLEDMV-CRGDIPDIIACTSLIRGLCKTGKTWKATRVME-ILEDSGAVPD 179

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TYNVLI G+C+ G++  A ++++ M     +P+V  Y T++   C  GKL+EA EV D
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
                   PD I YT LI   C+   V +A++LL EM+++GCK D+VT+N+++ G+C+EG
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           +++EA+  L  +   G   N  ++ I+L   C  G    A + L  M+ +G  P   T N
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L+  LC+ G+   A   L  + + G  P S S+  L+  +C+ +K+  A E LD +V
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 228/443 (51%), Gaps = 10/443 (2%)

Query: 52  DARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF 111
           D+      I++   IS      E   AL++ + +S     + +  TY TIL  L    K 
Sbjct: 173 DSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS----VSPDVVTYNTILRTLCDSGKL 228

Query: 112 -EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
            EA++ + RQM  E C      +  L++     S   + +++  ++      KP +   +
Sbjct: 229 KEAMEVLDRQMQRE-CYPDVITYTILIEATCKESGVGQAMKLLDEMRD-KGCKPDVVTYN 286

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
             +N + +  ++D A  FL +   +   +PN    NI+++  C  G    A + L EM +
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSY-GCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
              S P+++T++ LI+ LC+ G    AI++ E+M  +    P++L+YN L+   C+  K+
Sbjct: 346 KGCS-PSVVTFNILINFLCRKGLIGRAIDVLEKM-PQHGCTPNSLSYNPLLHALCKDKKM 403

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           +RA + ++ M + GC P++  Y TL+   CK+GK+  A E+ +++ +    P  I Y T+
Sbjct: 404 ERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTV 463

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+   + G+ D+A++LL EMK +G K DI+T++ ++GGL REGK++EA+     L   G+
Sbjct: 464 IDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGV 523

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N  +Y  ++   C+  +  +AI+ L  M+ RG  P   +   L+  L   G+A++A  
Sbjct: 524 KPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALE 583

Query: 471 ALFGLVEMGFKPESDSWALLVEL 493
            L  L   G   +S +  ++V++
Sbjct: 584 LLNELCSRGVVKKSSAEQVVVKI 606



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 3/228 (1%)

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R G+++   K +E M   G  P++   T+L+ G CK GK  +A  V + +++    PD I
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  LI+ +C+ G +  AL+LL  M       D+VT+N IL  LC  GK++EA+ +L++ 
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
                Y +  +Y I++  +C++  + +A++LL  M  +G  P   T N L+  +CK G  
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++A   L  +   G +P   +  +++  +C   + + A + L E++ K
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 182/311 (58%), Gaps = 5/311 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+LI  +CK G +++A +VL  M  +    P+++TY+T++  LC +G+ ++A+E
Sbjct: 182 PDVITYNVLISGYCKSGEIDNALQVLDRMNVA----PDVVTYNTILRTLCDSGKLKQAME 237

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + +  + K +  PD +TY +LI+  C+   V +A K+++ M+N G  P+V  Y  L+NG 
Sbjct: 238 VLDRQLQK-ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG+L EA +  + M ++  +P+ I +  ++   C  GR  +A +LL +M  +GC   +
Sbjct: 297 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 356

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFNI++  LCR+G +  A+ +LEK+   G   N  SY  +L+  C++ ++++AIE L +
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T N LL  LCK G  + A   L  L   G  P   ++  +++ + +  K
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476

Query: 500 LLFAFELLDEL 510
              A +LLDE+
Sbjct: 477 TERAIKLLDEM 487



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 183/326 (56%), Gaps = 6/326 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N+LI   CK G L+ A + L  M  S    PN+IT++ ++  +C  GR+ +A 
Sbjct: 283 KPDVVTYNVLINGICKEGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMCSTGRWMDAE 341

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +L  +M+ K    P  +T+N+LI+  CR G + RA  I+E M  +GC PN  +Y  L++G
Sbjct: 342 KLLSDMLRKG-CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 400

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FCKE K+  A E  D M +    PD + Y TL+   C+ G+VD A+E+L ++  +GC   
Sbjct: 401 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 460

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+N ++ GL + GK E A+ +L+++   G+  +  +Y  +++   ++G++++AI+   
Sbjct: 461 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 520

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P+  T N +++ LCK+   + A   L  ++    KP   ++ +L+E I    
Sbjct: 521 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 580

Query: 499 KLLFAFELLDEL----VIKESGTIQV 520
               A +LL+EL    ++K+S   QV
Sbjct: 581 LAKEALDLLNELCSRGLVKKSSAEQV 606



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 171/306 (55%), Gaps = 5/306 (1%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI+  C+ G  + A  V++ +++S  + P++ITY+ LI G CK+G    A+++ + M   
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSG-AVPDVITYNVLISGYCKSGEIDNALQVLDRM--- 210

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD +TYN ++   C  GK+ +A ++++      C P+V  YT L+   CKE  + +
Sbjct: 211 -NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 269

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++ DEM+N   KPD + Y  LIN  C+ GR+DEA++ L  M   GC+ +++T NIIL 
Sbjct: 270 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 329

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            +C  G+  +A  +L  +   G   +  ++ I++NF C++G L +AI++L  M   G  P
Sbjct: 330 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 389

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  + N LL   CK    + A   L  +V  G  P+  ++  L+  +C+  K+  A E+L
Sbjct: 390 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 449

Query: 508 DELVIK 513
           ++L  K
Sbjct: 450 NQLSSK 455



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 206/398 (51%), Gaps = 4/398 (1%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY TIL  L    K +    VL +   + C      +  L++     S   + +++  +
Sbjct: 217 VTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDE 276

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +      KP +   +  +N + +  ++D A  FL     +   +PN    NI+++  C  
Sbjct: 277 MRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY-GCQPNVITHNIILRSMCST 334

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G    A ++L +M +   S P+++T++ LI+ LC+ G    AI++ E+M       P++L
Sbjct: 335 GRWMDAEKLLSDMLRKGCS-PSVVTFNILINFLCRQGLLGRAIDILEKM-PMHGCTPNSL 392

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           +YN L+ GFC+  K+DRA + ++ M + GC P++  Y TL+   CK+GK+  A E+ +++
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 452

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
            +    P  I Y T+I+   + G+ + A++LL EM+ +G K DI+T++ ++ GL REGK+
Sbjct: 453 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 512

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA+     L   GI  N  +Y  ++   C+  + ++AI+ L  M+ +   P  AT   L
Sbjct: 513 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTIL 572

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           +  +   G+A++A   L  L   G   +S +  + V++
Sbjct: 573 IEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 610



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 145/263 (55%), Gaps = 4/263 (1%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L +NG   +  +  E MV +  I PD +    LI GFCR GK  +A  +ME ++ +G  P
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDI-PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVP 182

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V  Y  L++G+CK G++  A +V D M    + PD + Y T++   C +G++ +A+E+L
Sbjct: 183 DVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVL 239

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
               ++ C  D++T+ I++   C+E  + +A+ +L+++   G   +  +Y +++N  C++
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G L++AI+ L  M   G  P+  T N +L  +C  G   DA   L  ++  G  P   ++
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359

Query: 488 ALLVELICRGRKLLFAFELLDEL 510
            +L+  +CR   L  A ++L+++
Sbjct: 360 NILINFLCRQGLLGRAIDILEKM 382



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 3/162 (1%)

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
             R G +++  + L+ M  RG   DI+    ++ G CR GK ++A  ++E L   G   +
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y ++++  C+ GE++ A+++L  M      P   T N +L  LC +G  + A   L 
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
             ++    P+  ++ +L+E  C+   +  A +LLDE+  K S
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS 282



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 39/229 (17%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K D  +E  D  V        +++   ++ +  + +   A+EI N +S  KG +    TY
Sbjct: 406 KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS-SKGCSPVLITY 464

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
            T++D L++  K E    +L +M        +G+                          
Sbjct: 465 NTVIDGLSKVGKTERAIKLLDEMR------RKGL-------------------------- 492

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
               KP +   S+ ++ L    +VD A  F  +  + L ++PN   +N ++   CK    
Sbjct: 493 ----KPDIITYSSLVSGLSREGKVDEAIKFF-HDLEGLGIRPNAITYNSIMLGLCKSRQT 547

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           + A + L  M  S+   P   TY+ LI+G+   G  +EA++L  E+ S+
Sbjct: 548 DRAIDFLAYM-ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 595


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 224/426 (52%), Gaps = 3/426 (0%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q    IF + S+   +   ++T+ ++++  A    F  +  V  +M  E   F E  F+ 
Sbjct: 61  QSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFIL 120

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS-NQ 194
           + + +    L E+ +E+F ++    + + ++++ ++ LN++I+      A  F +     
Sbjct: 121 VFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGG 180

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + PN   FN++IK  CK G ++ A EV +EM   Q   P++ TY TL+DGLCK  R 
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMA-IQKCEPDVFTYCTLMDGLCKEDRI 239

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA+ L +EM   +   P ++T+NVLI+G C+ G + R  K+++ M   GC PN   Y T
Sbjct: 240 DEAVLLLDEM-QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++NG C +GKL +A  + D M      P+ + Y TLIN   + GR  + + LL  ++ERG
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
             A+   ++ ++ GL +E K EEA+G+ +K+   G   N   Y  +++  C++G+L++A 
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           E+L  M+ +G  P+  T + L+    K G ++ A      + +    P    +++L+  +
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478

Query: 495 CRGRKL 500
           C   KL
Sbjct: 479 CEDGKL 484



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 214/451 (47%), Gaps = 38/451 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F  ++ QK    +  TY T++D L +  + +    +L +M  E C F   +  N++
Sbjct: 207 AIEVFREMAIQK-CEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGC-FPSSVTFNVL 264

Query: 138 -----KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
                K      + + V  MF K        P+    +T +N L    ++D A + L   
Sbjct: 265 INGLCKKGDMVRVTKLVDNMFLK-----GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 319

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
               +  PN   +  LI    K+G       +L  +++ +  + N   YSTLI GL K  
Sbjct: 320 VAS-KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE-RGHHANEYAYSTLISGLFKEE 377

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EA+ L+++MV K    P+ + Y+ LIDG CR GK+D AK+I+  M N GC PN F Y
Sbjct: 378 KSEEAMGLWKKMVEKG-CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 436

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           ++L+ GF K G  Q+A  V+ EM      P+ I Y+ LI+  C  G++ EA+ +   M  
Sbjct: 437 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 496

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLW--YDGIYLNKASYRIVLNFSCQKGEL 430
           RG + D+V ++ ++ GLC  G +E  L +  ++         +  +Y I+L   C++  +
Sbjct: 497 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 556

Query: 431 EKAIELLRLMLCRGFLPHYATSN---------------------ELLVRLCKAGMAEDAA 469
             AI+LL  ML RG  P   T N                     EL+VRL K      AA
Sbjct: 557 SHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAA 616

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +  +++    P + +W  ++  +C+ +K+
Sbjct: 617 KIIEVMLQKFLPPNASTWERIIPELCKPKKV 647



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 163/310 (52%), Gaps = 1/310 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F ++ + + K    E A E+   M         + +++++++ + + G F  A+E +E  
Sbjct: 118 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECG 177

Query: 265 VS-KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           V  K  I P+ L++N++I   C+ G VDRA ++   M    C P+VF Y TLM+G CKE 
Sbjct: 178 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 237

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++ EA  + DEM+     P ++ +  LIN  C+ G +    +L+  M  +GC  + VT+N
Sbjct: 238 RIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYN 297

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            I+ GLC +GK+++A+ +L+++       N  +Y  ++N   ++G     + LL  +  R
Sbjct: 298 TIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 357

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G   +    + L+  L K   +E+A      +VE G +P    ++ L++ +CR  KL  A
Sbjct: 358 GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEA 417

Query: 504 FELLDELVIK 513
            E+L E+V K
Sbjct: 418 KEILCEMVNK 427



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 127/291 (43%), Gaps = 32/291 (10%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           ++   IS +  E++ + A+ ++  + E KG   N   Y+ ++D L R  K +    +L +
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVE-KGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           M  + C  +   + +L+K F      ++ + ++ ++      K +      C ++LI   
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM-----AKNNCVPNEICYSVLIHGL 478

Query: 181 QVD--LAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYP 236
             D  L +  + +++   R L+P+   ++ +I   C  G++E   ++  EM  +   S P
Sbjct: 479 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF------------ 284
           +++TY+ L+  LCK      AI+L   M+ +    PD +T N+ ++              
Sbjct: 539 DVVTYNILLRALCKQNSISHAIDLLNSMLDRG-CNPDLITCNIFLNALREKLNPPQDGRE 597

Query: 285 ------CRGGKVDR---AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                  R  K  R   A KI+E M      PN   +  ++   CK  K+Q
Sbjct: 598 FLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 225/447 (50%), Gaps = 17/447 (3%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
           P  A++ F+   EQ G+ H+  +Y  +LD L +         V + + +  C  +   F 
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFK 66

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            L++         R LE    +   +   P +   +  ++ L +    D A    + + +
Sbjct: 67  ILIRGNCKAGQATRALEFLRALDEFSV-APDVYIFNFLIHGLFKDGNPDQAVKLFE-NME 124

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLID-GLCKNG 252
             R+ P+   +N +I   CK G LE A E+L+EM ++   S P+++TY+TLI+ G+CK+G
Sbjct: 125 SSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDG 184

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              EA+E+ + M       PD +TYN +I   C  G+V  A +I++ M    C+P++  +
Sbjct: 185 DVEEALEILDGMKLAGPA-PDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTF 240

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            TL++GFCK G L  A EV +EM    + PD I YT L+N  CR G+V  A  LL+E+  
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS---------YRIVLNF 423
           +G   D++ +  ++ GLC+ G+IEEA  +++++    I     S         Y IVL  
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGG 360

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             + G + KA+ L+  ++ RG++P   T N L+  LCKA    +A      +  +G  P 
Sbjct: 361 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPN 420

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
             +   +V  +CR  ++  A+ L+ E+
Sbjct: 421 DVTLGSVVFGLCRVGRVDDAWSLVVEM 447



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 183/339 (53%), Gaps = 8/339 (2%)

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           S++ DLA  F  ++ +    K +   +N L+    K G      +V K++  S  S PNL
Sbjct: 4   SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCS-PNL 62

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +T+  LI G CK G+   A+E F   + +  + PD   +N LI G  + G  D+A K+ E
Sbjct: 63  VTFKILIRGNCKAGQATRALE-FLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFE 121

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINC-FC 355
            M+++  NP++F Y T+++G CK G L++A+E+ +EM  +     PD + Y TLIN   C
Sbjct: 122 NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC 181

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G V+EALE+L  MK  G   D++T+N I+  LC  G++ EA  +L+ +       +  
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLV 238

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  +L+  C+ G L +A+E+L  M     LP   T   L+  LC+ G  + A   L  +
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           V  G+ P+  ++  LV+ +C+  ++  A +L+ E+  +E
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSARE 337



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 206/444 (46%), Gaps = 60/444 (13%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           F+ HG    L K +  P  A+++F  + E    N +  TY T++  L +    E    +L
Sbjct: 102 FLIHG----LFK-DGNPDQAVKLFENM-ESSRVNPDIFTYNTVISGLCKSGNLEKARELL 155

Query: 119 RQMTYETCKFHEGIF-LNLMKHFSNCSLH--ERVLEMFHKIHPITREKPSLKAISTCLNL 175
            +M     K    I   N + +   C     E  LE+   +  +    P +   ++ ++ 
Sbjct: 156 EEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK-LAGPAPDVITYNSIIHA 214

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L  + +V  A   LK     +   P+   FN L+   CK G L  A EVL+EM +  +  
Sbjct: 215 LCVAGRVVEAAEILK----TMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI-L 269

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++ITY+ L++GLC+ G+ + A  L EE+V +  I PD + Y  L+DG C+ G+++ A K
Sbjct: 270 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI-PDVIAYTSLVDGLCKSGEIEEAHK 328

Query: 296 IMEFMKNN--------------------------------------------GCNPNVFN 311
           +++ M                                               G  P+V  
Sbjct: 329 LVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 388

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y TL++G CK  +++EA ++ DEM +    P+ +   +++   CR GRVD+A  L+ EM 
Sbjct: 389 YNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 448

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
            +    ++V +  ++ GLC+  ++++A  +L+ +   G+ L+  +YR ++      G + 
Sbjct: 449 RKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVA 508

Query: 432 KAIELLRLMLCRGFLPHYATSNEL 455
           +A+ +   M+ RGFLP  +TS  L
Sbjct: 509 EAMAMYDEMVARGFLPDGSTSKTL 532


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 182/311 (58%), Gaps = 5/311 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+LI  +CK G +++A +VL  M  +    P+++TY+T++  LC +G+ ++A+E
Sbjct: 125 PDVITYNVLISGYCKSGEIDNALQVLDRMNVA----PDVVTYNTILRTLCDSGKLKQAME 180

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + +  + K +  PD +TY +LI+  C+   V +A K+++ M+N G  P+V  Y  L+NG 
Sbjct: 181 VLDRQLQK-ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG+L EA +  + M ++  +P+ I +  ++   C  GR  +A +LL +M  +GC   +
Sbjct: 240 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 299

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFNI++  LCR+G +  A+ +LEK+   G   N  SY  +L+  C++ ++++AIE L +
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 359

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T N LL  LCK G  + A   L  L   G  P   ++  +++ + +  K
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419

Query: 500 LLFAFELLDEL 510
              A +LLDE+
Sbjct: 420 TERAIKLLDEM 430



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 183/326 (56%), Gaps = 6/326 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N+LI   CK G L+ A + L  M  S    PN+IT++ ++  +C  GR+ +A 
Sbjct: 226 KPDVVTYNVLINGICKEGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMCSTGRWMDAE 284

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +L  +M+ K    P  +T+N+LI+  CR G + RA  I+E M  +GC PN  +Y  L++G
Sbjct: 285 KLLSDMLRKG-CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 343

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FCKE K+  A E  D M +    PD + Y TL+   C+ G+VD A+E+L ++  +GC   
Sbjct: 344 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 403

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+N ++ GL + GK E A+ +L+++   G+  +  +Y  +++   ++G++++AI+   
Sbjct: 404 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 463

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P+  T N +++ LCK+   + A   L  ++    KP   ++ +L+E I    
Sbjct: 464 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 523

Query: 499 KLLFAFELLDEL----VIKESGTIQV 520
               A +LL+EL    ++K+S   QV
Sbjct: 524 LAKEALDLLNELCSRGLVKKSSAEQV 549



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 170/303 (56%), Gaps = 5/303 (1%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI+  C+ G  + A  V++ +++S  + P++ITY+ LI G CK+G    A+++ + M   
Sbjct: 98  LIRGFCRIGKTKKATWVMEILEQSG-AVPDVITYNVLISGYCKSGEIDNALQVLDRM--- 153

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD +TYN ++   C  GK+ +A ++++      C P+V  YT L+   CKE  + +
Sbjct: 154 -NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 212

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++ DEM+N   KPD + Y  LIN  C+ GR+DEA++ L  M   GC+ +++T NIIL 
Sbjct: 213 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 272

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            +C  G+  +A  +L  +   G   +  ++ I++NF C++G L +AI++L  M   G  P
Sbjct: 273 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 332

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  + N LL   CK    + A   L  +V  G  P+  ++  L+  +C+  K+  A E+L
Sbjct: 333 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 392

Query: 508 DEL 510
           ++L
Sbjct: 393 NQL 395



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 206/398 (51%), Gaps = 4/398 (1%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY TIL  L    K +    VL +   + C      +  L++     S   + +++  +
Sbjct: 160 VTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDE 219

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +      KP +   +  +N + +  ++D A  FL     +   +PN    NI+++  C  
Sbjct: 220 MRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY-GCQPNVITHNIILRSMCST 277

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G    A ++L +M +   S P+++T++ LI+ LC+ G    AI++ E+M       P++L
Sbjct: 278 GRWMDAEKLLSDMLRKGCS-PSVVTFNILINFLCRQGLLGRAIDILEKM-PMHGCTPNSL 335

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           +YN L+ GFC+  K+DRA + ++ M + GC P++  Y TL+   CK+GK+  A E+ +++
Sbjct: 336 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 395

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
            +    P  I Y T+I+   + G+ + A++LL EM+ +G K DI+T++ ++ GL REGK+
Sbjct: 396 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 455

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA+     L   GI  N  +Y  ++   C+  + ++AI+ L  M+ +   P  AT   L
Sbjct: 456 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTIL 515

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           +  +   G+A++A   L  L   G   +S +  + V++
Sbjct: 516 IEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 553



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 145/263 (55%), Gaps = 4/263 (1%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L +NG   +  +  E MV +  I PD +    LI GFCR GK  +A  +ME ++ +G  P
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDI-PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVP 125

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V  Y  L++G+CK G++  A +V D M    + PD + Y T++   C +G++ +A+E+L
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
               ++ C  D++T+ I++   C+E  + +A+ +L+++   G   +  +Y +++N  C++
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G L++AI+ L  M   G  P+  T N +L  +C  G   DA   L  ++  G  P   ++
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302

Query: 488 ALLVELICRGRKLLFAFELLDEL 510
            +L+  +CR   L  A ++L+++
Sbjct: 303 NILINFLCRQGLLGRAIDILEKM 325



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 3/162 (1%)

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
             R G +++  + L+ M  RG   DI+    ++ G CR GK ++A  ++E L   G   +
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y ++++  C+ GE++ A+++L  M      P   T N +L  LC +G  + A   L 
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
             ++    P+  ++ +L+E  C+   +  A +LLDE+  K S
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS 225



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 39/229 (17%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K D  +E  D  V        +++   ++ +  + +   A+EI N +S  KG +    TY
Sbjct: 349 KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS-SKGCSPVLITY 407

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
            T++D L++  K E    +L +M        +G+                          
Sbjct: 408 NTVIDGLSKVGKTERAIKLLDEMR------RKGL-------------------------- 435

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
               KP +   S+ ++ L    +VD A  F  +  + L ++PN   +N ++   CK    
Sbjct: 436 ----KPDIITYSSLVSGLSREGKVDEAIKFF-HDLEGLGIRPNAITYNSIMLGLCKSRQT 490

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           + A + L  M  S+   P   TY+ LI+G+   G  +EA++L  E+ S+
Sbjct: 491 DRAIDFLAYM-ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 538


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 225/469 (47%), Gaps = 36/469 (7%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
           P  A++ F+   EQ G+ H+  +Y  +LD L +         V + + +  C  +   F 
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFK 66

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            L++         R LE    +   +   P +   +  ++ L +    D A    + + +
Sbjct: 67  ILIRGNCKAGQAMRALEFLRALDEFS-VAPDVYIFNVLIHGLFKDGNPDQAVKLFE-NME 124

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGR 253
             R+KP    +N +I   CK G LE A E+L+EM +K   S P+++TY+TLI+   +  R
Sbjct: 125 SSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASR 184

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--------- 304
            REA   F E +    I PD LT N+L+ G C+ G V+ A +I++ MK  G         
Sbjct: 185 IREACA-FREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 305 -----------------------CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
                                  C+P++  + TL++GFCK G L  A EV +EM    + 
Sbjct: 244 SIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL 303

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD I YT L+N  CR G+V  A  LL+E+  +G   D++ +  ++ GLC+ G+IEEA  +
Sbjct: 304 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 363

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           ++++   G       Y  +++  C+ G + KA E+L  M+    +P   T N +L  L K
Sbjct: 364 VKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIK 423

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G    A   +  LV  G+ P+  ++  L++ +C+  ++  A +L DE+
Sbjct: 424 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 472



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   ++ ++ L  + +V  A   LK     +   P+   FN L+   CK G L  A E
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEILK----TMSCSPDLVTFNTLLDGFCKAGMLPRALE 292

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VL+EM +  +  P++ITY+ L++GLC+ G+ + A  L EE+V +  I PD + Y  L+DG
Sbjct: 293 VLEEMCRENI-LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI-PDVIAYTSLVDG 350

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G+++ A K+++ M   GC   V  Y++L++G+C+ G + +A+E+  EM +  + P 
Sbjct: 351 LCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPP 410

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y  ++    + G + +A+ L+ ++  RG   D+VT+N ++ GLC+  ++ EA  + +
Sbjct: 411 LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLAD 470

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G + N  +   V+   C+ G ++ A  L+  M  +   P+      L+  LCK+ 
Sbjct: 471 EMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 530

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             +DA + L  +   G   +  ++  L+  +  G ++  A  + DE+V +
Sbjct: 531 RMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVAR 580



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 191/380 (50%), Gaps = 12/380 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALEI + + +  G   +  TY +I+  L    K      +L+ M+   C      F  L+
Sbjct: 223 ALEILDGM-KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLL 278

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             F    +  R LE+  ++    RE   P +   +  +N L    QV +A   L+   + 
Sbjct: 279 DGFCKAGMLPRALEVLEEM---CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ 335

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             + P+   +  L+   CK G +E A +++KEM   +     ++ YS+L+ G C+ G   
Sbjct: 336 GYI-PDVIAYTSLVDGLCKSGEIEEAHKLVKEMS-VRGCRTGVVMYSSLVSGYCRAGNVH 393

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A E+  EMVS + + P   TYN+++ G  + G + +A  ++  +   G  P+V  Y TL
Sbjct: 394 KAREILAEMVSINMV-PPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CK  +++EA ++ DEM +    P+ +   +++   CR GRVD+A  L+ EM  +  
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 512

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             ++V +  ++ GLC+  ++++A  +L+ +   G+ L+  +YR ++      G + +A+ 
Sbjct: 513 APNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMA 572

Query: 436 LLRLMLCRGFLPHYATSNEL 455
           +   M+ RGFLP  +TS  L
Sbjct: 573 MYDEMVARGFLPDGSTSKTL 592



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 3/160 (1%)

Query: 356 RAGRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           R+ R D A++      E+ G K D+ ++N +L  L + G       + + L + G   N 
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +++I++  +C+ G+  +A+E LR +      P     N L+  L K G   D A+ LF 
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDG-NPDQAVKLFE 121

Query: 475 LVEMG-FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +E    KPE  ++  ++  +C+   L  A ELL+E++ K
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRK 161


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 181/315 (57%), Gaps = 4/315 (1%)

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           E N  D  + F + + + LR  P    FN LI  +CK G L+  F +   M+KS+ + P+
Sbjct: 253 EGNICDAQKVFDEITKRSLR--PTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSR-TRPD 309

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + TYS LI+ LCK  +   A  LF EM  +  ++P+ + +  LI G  R G++D  K+  
Sbjct: 310 VFTYSALINALCKENKMDGAHRLFYEMCER-GLIPNDVIFTTLIHGHSRNGQIDLMKESY 368

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M + G  P++  Y TL+NGFCK G L  A+ + D M    L+PD + YTTLI+ FCR 
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRG 428

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G VD ALE+ KEM + G + D V F+ ++ G+C+EG++ +A   L ++   G+  +  +Y
Sbjct: 429 GDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTY 488

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            ++++  C+KG+ +   +LL+ M   G +P+  T N LL  LCK G  ++A + L  ++ 
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548

Query: 478 MGFKPESDSWALLVE 492
           +G  P+  ++  L+E
Sbjct: 549 VGVVPDDITYNTLLE 563



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 152/274 (55%), Gaps = 1/274 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N+  ++ L++  CK G   +A ++F+E ++K  + P  +++N LI+G+C+ G +D   ++
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDE-ITKRSLRPTVVSFNTLINGYCKVGNLDVGFRL 297

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
              M+ +   P+VF Y+ L+N  CKE K+  A  +F EM    L P+ + +TTLI+   R
Sbjct: 298 KHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSR 357

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++D   E  ++M  +G + DIV +N ++ G C+ G +  A  +++ +   G+  +K +
Sbjct: 358 NGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVT 417

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C+ G+++ A+E+ + M   G        + L+  +CK G   DA  AL  ++
Sbjct: 418 YTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREML 477

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G KP+  ++ ++++  C+       F+LL E+
Sbjct: 478 RAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 137/298 (45%), Gaps = 41/298 (13%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R +P +   S  +N L + N++D A   L Y      L PN  IF  LI  H + G ++
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHR-LFYEMCERGLIPNDVIFTTLIHGHSRNGQID 362

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
              E  ++M    +  P+++ Y+TL++G CKNG    A  + + M+ +  + PD +TY  
Sbjct: 363 LMKESYQKMLSKGLQ-PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR-GLRPDKVTYTT 420

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGC---------------------------------- 305
           LIDGFCRGG VD A +I + M  NG                                   
Sbjct: 421 LIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAG 480

Query: 306 -NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             P+   YT +M+ FCK+G  Q   ++  EM++    P+ + Y  L+N  C+ G++  A 
Sbjct: 481 MKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNAD 540

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            LL  M   G   D +T+N +L G  R     +      ++   GI  + ASY+ ++N
Sbjct: 541 MLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYKQKPEI---GIVADLASYKSLVN 595



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%)

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           E+ + G   ++  FNI++   C+EG I +A  + +++    +     S+  ++N  C+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVG 289

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            L+    L   M      P   T + L+  LCK    + A    + + E G  P    + 
Sbjct: 290 NLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFT 349

Query: 489 LLVE 492
            L+ 
Sbjct: 350 TLIH 353


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 108/295 (36%), Positives = 174/295 (58%), Gaps = 2/295 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P    FN LI  +CK G L+  F +  +M+KS+ + P++ TYS LI+ LCK  +   A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR-TRPDVFTYSALINALCKENKMDGA 329

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM  K  ++P+ + +  LI G  R G++D  K+  + M + G  P++  Y TL+N
Sbjct: 330 HGLFDEMC-KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK G L  A+ + D M    L+PD I YTTLI+ FCR G V+ ALE+ KEM + G + 
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V F+ ++ G+C+EG++ +A   L ++   GI  +  +Y ++++  C+KG+ +   +LL
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + M   G +P   T N LL  LCK G  ++A + L  ++ +G  P+  ++  L+E
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 164/295 (55%), Gaps = 5/295 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +P++ + +T +N   +   +D  + F LK+  +  R +P+   ++ LI   CK   ++ A
Sbjct: 272 QPTVVSFNTLINGYCKVGNLD--EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +  EM K  +  PN + ++TLI G  +NG      E +++M+SK  + PD + YN L+
Sbjct: 330 HGLFDEMCKRGL-IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK-GLQPDIVLYNTLV 387

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           +GFC+ G +  A+ I++ M   G  P+   YTTL++GFC+ G ++ A E+  EM    ++
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D +G++ L+   C+ GRV +A   L+EM   G K D VT+ +++   C++G  +    +
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL 507

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           L+++  DG   +  +Y ++LN  C+ G+++ A  LL  ML  G +P   T N LL
Sbjct: 508 LKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 232/508 (45%), Gaps = 62/508 (12%)

Query: 25  PWISPLEVIKANTPKADPPVETSD--TCVDARKRSRFISHGAAISLIKCE--KEPQCAL- 79
           P +  L V   ++ K DPP+E S    C   RK    +S    + LI       PQ ++ 
Sbjct: 44  PVLVKLSVAIRDSYK-DPPLEFSSFTDCPSIRKVLPSLSVHHVVDLINHNPLSLPQRSIF 102

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK-FHEGIFLNL-- 136
             F  +S Q GF     TY  +   LA ++ F    +++  +     K     +F++L  
Sbjct: 103 AFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVE 162

Query: 137 --------------MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
                         M  +++       ++ F     ++R+      I  C NLL      
Sbjct: 163 MRVTPMCGFLVDALMITYTDLGFIPDAIQCFR----LSRKHRFDVPIRGCGNLL------ 212

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
                     ++ ++L P   I+   ++       L++ F +            N+  ++
Sbjct: 213 ----------DRMMKLNPTGTIWGFYME------ILDAGFPL------------NVYVFN 244

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            L++  CK G   +A ++F+E ++K  + P  +++N LI+G+C+ G +D   ++   M+ 
Sbjct: 245 ILMNKFCKEGNISDAQKVFDE-ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +   P+VF Y+ L+N  CKE K+  A  +FDEM    L P+ + +TTLI+   R G +D 
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
             E  ++M  +G + DIV +N ++ G C+ G +  A  +++ +   G+  +K +Y  +++
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+ G++E A+E+ + M   G        + L+  +CK G   DA  AL  ++  G KP
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483

Query: 483 ESDSWALLVELICRGRKLLFAFELLDEL 510
           +  ++ ++++  C+       F+LL E+
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEM 511



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 48/379 (12%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  N   +  +++K  +         V  ++T  + +     F  L+  +      +  
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
             + H++   +R +P +   S  +N L + N++D A        +   L PN  IF  LI
Sbjct: 295 FRLKHQMEK-SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLIPNDVIFTTLI 352

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
             H + G ++   E  ++M    +  P+++ Y+TL++G CKNG    A  + + M+ +  
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQ-PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR-G 410

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC------------------------ 305
           + PD +TY  LIDGFCRGG V+ A +I + M  NG                         
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470

Query: 306 -----------NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
                       P+   YT +M+ FCK+G  Q   ++  EM++    P  + Y  L+N  
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G++  A  LL  M   G   D +T+N +L G  R     +      ++   GI  + 
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADL 587

Query: 415 ASYRIVLNFSCQKGELEKA 433
           ASY+ ++N      EL++A
Sbjct: 588 ASYKSIVN------ELDRA 600


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 220/431 (51%), Gaps = 10/431 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  N  T +++L+     K+     A++ QM + T      +  N + H     LH + 
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQM-FVTGYQPNTVTFNTLIH--GLFLHNKA 202

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    I  +  +  +P L      +N L +    DLA   L    Q  +L+P   I+  
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQG-KLEPGVLIYTT 261

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK   ++ A  + KEM+   +  PN++TYS+LI  LC  GR+ +A  L  +M+ +
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIR-PNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I PD  T++ LID F + GK+  A+K+ + M     +P++  Y++L+NGFC   +L E
Sbjct: 321 -KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AK++F+ M +    PD + Y+TLI  FC+A RVDE +EL +EM +RG   + VT+  ++ 
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G  + A  + +++  DG+  N  +Y  +L+  C+ G+LEKA+ +   +      P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N ++  +CKAG  ED       L   G KP+  ++  ++   CR      A  L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 508 DELVIKESGTI 518
            E+  KE GT+
Sbjct: 560 KEM--KEDGTL 568



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 216/424 (50%), Gaps = 10/424 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLH 146
           G+  N  T+ T++  L  + K     A++ +M  + C+      G+ +N +    +  L 
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
             +L    +     + +P +   +T ++ L ++  +D A N  K   +   ++PN   ++
Sbjct: 241 FILLNKMEQ----GKLEPGVLIYTTIIDGLCKNKHMDDALNLFK-EMETKGIRPNVVTYS 295

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   C  G    A  +L +M + +++ P++ T+S LID   K G+  EA +L++EMV 
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMV- 353

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  I P  +TY+ LI+GFC   ++D AK++ EFM +  C P+V +Y+TL+ GFCK  ++ 
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           E  E+F EM    L  +T+ YTTLI    +AG  D A E+ KEM   G   +I+T+N +L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+ GK+E+A+ + E L    +     +Y I++   C+ G++E   +L   +  +G  
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P     N ++   C+ G  E+A      + E G  P S  +  L+    R      + EL
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593

Query: 507 LDEL 510
           + E+
Sbjct: 594 IKEM 597



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 204/412 (49%), Gaps = 8/412 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG--IFLNLMKHFSNCSLH 146
           KG   +  TY  +++ L +    +    +L +M  E  K   G  I+  ++         
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM--EQGKLEPGVLIYTTIIDGLCKNKHM 272

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +  L +F ++      +P++   S+ ++ L    +   A   L    +  ++ P+   F+
Sbjct: 273 DDALNLFKEME-TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFS 330

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI    K G L  A ++  EM K  +  P+++TYS+LI+G C + R  EA ++FE MVS
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSID-PSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K    PD ++Y+ LI GFC+  +VD   ++   M   G   N   YTTL+ G  + G   
Sbjct: 390 K-HCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCD 448

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+E+F EM +  + P+ + Y TL++  C+ G++++A+ + + ++    +  I T+NI++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G+C+ GK+E+   +   L   G+  +  +Y  +++  C+KG  E+A  L + M   G L
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           P+    N L+    + G  E +A  +  +   GF  ++ +  L+  ++  GR
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 205/418 (49%), Gaps = 15/418 (3%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           KA   V   D  V    +   +++G  ++ +    +   A  + N + EQ         Y
Sbjct: 201 KASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM-EQGKLEPGVLIY 259

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK---HFSNCSLHERVL-EMFH 154
            TI+D L + K  +    + ++M  +  + +   + +L+    ++   S   R+L +M  
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHC 213
           +     +  P +   S  ++  ++  ++  A+    Y     R + P+   ++ LI   C
Sbjct: 320 R-----KINPDVFTFSALIDAFVKEGKLVEAEKL--YDEMVKRSIDPSIVTYSSLINGFC 372

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
               L+ A ++  E   S+  +P++++YSTLI G CK  R  E +ELF EM S+  ++ +
Sbjct: 373 MHDRLDEAKQMF-EFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREM-SQRGLVGN 430

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TY  LI G  + G  D A++I + M ++G  PN+  Y TL++G CK GKL++A  VF+
Sbjct: 431 TVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            ++   ++P    Y  +I   C+AG+V++  +L   +  +G K D+V +N ++ G CR+G
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             EEA  + +++  DG   N   Y  ++    + G+ E + EL++ M   GF    +T
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 186/387 (48%), Gaps = 38/387 (9%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   S  L+ + + N+ D+  + L    Q+L +  N   ++ILI   C+R  L 
Sbjct: 75  SRPFPSIIEFSKLLSAIAKMNKFDVVIS-LGEQMQNLGMPHNHYTYSILINCFCRRSQLP 133

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSK----------- 267
            A  VL +M K  + Y PN++T S+L++G C + R  EA+ L ++M              
Sbjct: 134 LALAVLGKMMK--LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191

Query: 268 ------------------DQIL-----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
                             D+++     PD +TY V+++G C+ G  D A  ++  M+   
Sbjct: 192 LIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGK 251

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             P V  YTT+++G CK   + +A  +F EM+   ++P+ + Y++LI+C C  GR  +A 
Sbjct: 252 LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            LL +M ER    D+ TF+ ++    +EGK+ EA  + +++    I  +  +Y  ++N  
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C    L++A ++   M+ +   P   + + L+   CKA   ++       + + G    +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
            ++  L++ + +      A E+  E+V
Sbjct: 432 VTYTTLIQGLFQAGDCDMAQEIFKEMV 458



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 159/295 (53%), Gaps = 4/295 (1%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-DALT 276
           L+ A  +  EM KS+  +P++I +S L+  + K  +F   I L E+M  ++  +P +  T
Sbjct: 62  LDDAVALFGEMVKSR-PFPSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGMPHNHYT 118

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y++LI+ FCR  ++  A  ++  M   G  PN+   ++L+NG+C   ++ EA  + D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +P+T+ + TLI+      +  EA+ L+  M  +GC+ D+VT+ +++ GLC+ G  +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A  +L K+    +      Y  +++  C+   ++ A+ L + M  +G  P+  T + L+
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LC  G   DA+  L  ++E    P+  +++ L++   +  KL+ A +L DE+V
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 112/225 (49%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K+D A  +   M  +   P++  ++ L++   K  K      + ++M+N  +  +   Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LINCFCR  ++  AL +L +M + G + +IVT + +L G C   +I EA+ ++++++  
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N  ++  +++      +  +A+ L+  M+ +G  P   T   ++  LCK G  + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            I L  + +   +P    +  +++ +C+ + +  A  L  E+  K
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK 285



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 1/194 (0%)

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG   E KL +A  +F EM      P  I ++ L++   +  + D  + L ++M+  G  
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +  T++I++   CR  ++  AL +L K+   G   N  +   +LN  C    + +A+ L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           +  M   G+ P+  T N L+  L     A +A   +  +V  G +P+  ++ ++V  +C+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 497 GRKLLFAFELLDEL 510
                 AF LL+++
Sbjct: 234 RGDTDLAFILLNKM 247


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 241/455 (52%), Gaps = 18/455 (3%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDK---LARYKKFEAVDAV 117
           S+ + +  +   +  Q A  + + V  +KG    ++ +A+IL+    L+    F+A+ +V
Sbjct: 112 SYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSV 171

Query: 118 LRQMTYETCK---FHEGIFLNLMKHFSNCS-LHERVLEMFHKIHPI--------TREKPS 165
             +  Y +     F      NL   F+ C  L ER+++M   +  +        +   P+
Sbjct: 172 YTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPN 231

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           +   +  +N L +  +V  AQ       +   L+P    FN LI  +CK G LE  F + 
Sbjct: 232 VYTFNVLMNRLCKEGKVKDAQLIFD-EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLK 290

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
             M++ ++ +P++ TYS LIDGLCK  +  +A  LF+EM  +  ++P+ +T+  LI+G C
Sbjct: 291 MVMEEFRV-FPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG-LVPNDVTFTTLINGQC 348

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + G+VD A +I + M   G   ++  Y TL++G CK G  +EA++   EM    L PD  
Sbjct: 349 KNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKF 408

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YTTL++  C+ G ++ ALE+ KEM + G + D V F  I+ GLCR+GKI +A   L ++
Sbjct: 409 TYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREM 468

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+  +  +Y +V++  C+KG+++   +LL+ M   G +P   T N L+  LCK G  
Sbjct: 469 LRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQV 528

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           ++A + L  ++ +G  P+  ++ +L++  C+  KL
Sbjct: 529 KNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL 563



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 176/308 (57%), Gaps = 6/308 (1%)

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
           C+   +IK       LE   E+L          PN+ T++ L++ LCK G+ ++A  +F+
Sbjct: 202 CLLERMIKMSSPMVALEFYLEILDSGYP-----PNVYTFNVLMNRLCKEGKVKDAQLIFD 256

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           E + K  + P A+++N LI+G+C+ G ++   ++   M+     P+VF Y+ L++G CKE
Sbjct: 257 E-IRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKE 315

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            +L++A  +F EM +  L P+ + +TTLIN  C+ GRVD ALE+ ++M  +G KAD+V +
Sbjct: 316 CQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLY 375

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++ GLC+ G   EA   + ++   G+  +K +Y  +L+ SC++G+LE A+E+ + M+ 
Sbjct: 376 NTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVK 435

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G          ++  LC+ G   DA   L  ++  G KP+  ++ ++++  C+   +  
Sbjct: 436 EGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKM 495

Query: 503 AFELLDEL 510
            F+LL E+
Sbjct: 496 GFKLLKEM 503



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 184/341 (53%), Gaps = 8/341 (2%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
           T  +P+  + +T +N   +S   +L + F LK   +  R+ P+   ++ LI   CK   L
Sbjct: 261 TGLQPTAVSFNTLINGYCKSG--NLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQL 318

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           E A  + KEM    +  PN +T++TLI+G CKNGR   A+E++++M +K  +  D + YN
Sbjct: 319 EDANHLFKEMCDRGL-VPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKG-LKADLVLYN 376

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            LIDG C+GG    A+K +  M   G  P+ F YTTL++G CKEG L+ A E+  EM   
Sbjct: 377 TLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKE 436

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            ++ D + +T +I+  CR G++ +A   L+EM   G K D  T+ +++ G C++G ++  
Sbjct: 437 GIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMG 496

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             +L+++  DG      +Y +++N  C++G+++ A  LL  ML  G +P   T N LL  
Sbjct: 497 FKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            CK G   D         EMG   +  S+  L+  + +  K
Sbjct: 557 HCKHGKLGDFQNV---KTEMGLVSDYASYRSLLHELSKASK 594



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 102/228 (44%)

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R GK   +      ++  G   + F +  LM+ + + G + +A + F   K   LK    
Sbjct: 139 RKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFN 198

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
           G   L+    +      ALE   E+ + G   ++ TFN+++  LC+EGK+++A  + +++
Sbjct: 199 GCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI 258

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+     S+  ++N  C+ G LE+   L  +M      P   T + L+  LCK    
Sbjct: 259 RKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQL 318

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           EDA      + + G  P   ++  L+   C+  ++  A E+  ++  K
Sbjct: 319 EDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTK 366


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 182/314 (57%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N+LI   CK   +  A+ +LKEMK+S ++ PN++TYST+I G C+  +   A +
Sbjct: 40  PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA-PNVVTYSTVIHGFCRQTKVDTAYK 98

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF +MV ++  +P+ +TYN L+ G CR G +D A ++++ M+  G  P+ F+Y TLM G 
Sbjct: 99  LFRQMV-ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 157

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK GK+  A +VF++  N    PD + Y+TLI   C+ GR+DEA +L ++M+E  C+ D+
Sbjct: 158 CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDV 217

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTF  ++ GLC+  +++EA  +LE +       N  +Y  +++  C+ G++  A E+ + 
Sbjct: 218 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 277

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P+  T N L+   C     + A + +  +   G  P+  ++  L++ +C+  +
Sbjct: 278 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337

Query: 500 LLFAFELLDELVIK 513
              A  L  ++  K
Sbjct: 338 APEANRLFGDMKAK 351



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 222/422 (52%), Gaps = 17/422 (4%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           Y+T++  L +  + +    +  +M   +C+     F  LM         +R+ E    + 
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK---GDRLQEAQQVLE 241

Query: 158 PITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCK 214
            +      P++   S+ ++ L ++ QV  AQ   K     +R ++PN   +N LI   C 
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK--RMIVRGIEPNVVTYNSLIHGFCM 299

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
              ++SA  +++EM  +    P++ITY+TLIDGLCK GR  EA  LF +M +K    PD 
Sbjct: 300 TNGVDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK-FCNPDV 357

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +TY+ LI GFC+  ++D A+ + + M      P+V  ++TL+ G+C  G + +A+ + +E
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M      PD   YT+L++ FC+ GR+ EA  +LK M +RGC+ ++VT+  ++   CR GK
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL----RLMLCRGFLPHYA 450
              A  +LE++  +G+  N  +YR ++   C  G+LE+A ++L    R   C+  +  Y 
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
               ++  LC+ G    A   L  + + G  P  D +  L+  +C+G++L  A E+L+E+
Sbjct: 538 V---MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 594

Query: 511 VI 512
            +
Sbjct: 595 TL 596



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 215/428 (50%), Gaps = 10/428 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   N  TY+T++    R  K +    + RQM    C  +   +  L+       L 
Sbjct: 69  KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128

Query: 147 ERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +   E+  ++    RE+   P   +  T +  L ++ ++D+A    +  N +    P+  
Sbjct: 129 DEAYELLDEM----RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE-DNSNGDCPPDVV 183

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            ++ LI   CK G L+ A ++ ++M+++    P+++T++ L+DGLCK  R +EA ++ E 
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCE-PDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  ++   P+ +TY+ LIDG C+ G+V  A+++ + M   G  PNV  Y +L++GFC   
Sbjct: 243 MEDRN-CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +  A  + +EM      PD I Y TLI+  C+ GR  EA  L  +MK + C  D++T++
Sbjct: 302 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS 361

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++GG C+  +I+ A  + + +    +  +  ++  ++   C  G ++ A  LL  M+  
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 421

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T   L+   CK G   +A   L  + + G +P   ++  L++  CR  K   A
Sbjct: 422 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 481

Query: 504 FELLDELV 511
           ++LL+E+V
Sbjct: 482 YKLLEEMV 489



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 222/441 (50%), Gaps = 8/441 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ + + E +G   +  +Y T++  L +  K +    V    +   C      +  L+
Sbjct: 131 AYELLDEMRE-RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 189

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    +   ++F K+   + E P +   +  ++ L + +++  AQ  L+ + +   
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCE-PDVVTFTALMDGLCKGDRLQEAQQVLE-TMEDRN 247

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN   ++ LI   CK G +  A EV K M    +  PN++TY++LI G C       A
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE-PNVVTYNSLIHGFCMTNGVDSA 306

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L EEM +    LPD +TYN LIDG C+ G+   A ++   MK   CNP+V  Y+ L+ 
Sbjct: 307 LLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK  ++  A+ +FD+M    + PD + ++TL+  +C AG VD+A  LL+EM    C  
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ T+  ++ G C+ G++ EA  +L+++   G   N  +Y  +++  C+ G+   A +LL
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLL 485

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL-VEMGFKPESDSWALLVELICR 496
             M+  G  P+  T   L+   C  G  E+A   L  L  +   K +  ++ ++++ +CR
Sbjct: 486 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCR 545

Query: 497 GRKLLFAFELLDELVIKESGT 517
             ++  A ELL+   IK+SGT
Sbjct: 546 TGRMSAALELLE--AIKQSGT 564



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 166/311 (53%), Gaps = 2/311 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   + I+I   CK   L  A     +MKK + + PN  TY+ LI+G CK  +   A  L
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKK-KGTVPNEWTYNVLINGFCKVHKVHRAYLL 64

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM  +  + P+ +TY+ +I GFCR  KVD A K+   M  NGC PN+  Y TL++G C
Sbjct: 65  LKEM-KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           + G + EA E+ DEM+   L+PD   Y TL+   C+ G++D AL++ ++     C  D+V
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            ++ ++ GLC+ G+++EA  + EK+  +    +  ++  +++  C+   L++A ++L  M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             R   P+  T + L+  LCK G   DA      ++  G +P   ++  L+   C    +
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 501 LFAFELLDELV 511
             A  L++E+ 
Sbjct: 304 DSALLLMEEMT 314



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 200/410 (48%), Gaps = 43/410 (10%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+  ++D L +  + +    VL  M    C  +   + +L+             E+F ++
Sbjct: 219 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278

Query: 157 HPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
             I R  +P++   ++ ++    +N VD A   ++       L P+   +N LI   CK 
Sbjct: 279 --IVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL-PDIITYNTLIDGLCKT 335

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G    A  +  +MK ++   P++ITYS LI G CK  R   A  LF++M+ K  +LPD +
Sbjct: 336 GRAPEANRLFGDMK-AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML-KQAVLPDVV 393

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           T++ L++G+C  G VD A++++E M  + C+P+V+ YT+L++GFCK G++ EA+ V   M
Sbjct: 394 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 453

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM------------------------- 370
                +P+ + YT LI+ FCRAG+   A +LL+EM                         
Sbjct: 454 AKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDL 513

Query: 371 -----------KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
                      ++  CKAD+  + +++ GLCR G++  AL +LE +   G       Y  
Sbjct: 514 EEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVA 573

Query: 420 VLNFSCQKGELEKAIELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDA 468
           ++   CQ  EL KA+E+L  M L R   P+      ++  L + G  E+A
Sbjct: 574 LIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 157/277 (56%), Gaps = 1/277 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N+IT++ +IDGLCK  R  EA   F +M  K  + P+  TYNVLI+GFC+  KV RA  +
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLL 64

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           ++ MK +G  PNV  Y+T+++GFC++ K+  A ++F +M      P+ + Y TL++  CR
Sbjct: 65  LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G +DEA ELL EM+ERG + D  +++ ++ GLC+ GKI+ AL + E         +  +
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++   C+ G L++A +L   M      P   T   L+  LCK    ++A   L  + 
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +    P   +++ L++ +C+  ++  A E+   ++++
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVR 281



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 136/279 (48%), Gaps = 40/279 (14%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   S  +    +  ++D+A+       +   L P+   F+ L++ +C  G ++ A  
Sbjct: 355 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL-PDVVTFSTLVEGYCNAGLVDDAER 413

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L+EM  S  S P++ TY++L+DG CK GR  EA  + + M +K    P+ +TY  LID 
Sbjct: 414 LLEEMVASDCS-PDVYTYTSLVDGFCKVGRMVEARRVLKRM-AKRGCQPNVVTYTALIDA 471

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKP 342
           FCR GK   A K++E M  NG  PNV  Y +L+ GFC  G L+EA+++ + + ++   K 
Sbjct: 472 FCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKA 531

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC------------ 390
           D   Y  +++  CR GR+  ALELL+ +K+ G       +  ++ GLC            
Sbjct: 532 DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 591

Query: 391 ------------------------REGKIEEALGMLEKL 405
                                   REG+ EEA  + ++L
Sbjct: 592 EEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 2/207 (0%)

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C  NV  +T +++G CK  +L EA   F +MK     P+   Y  LIN FC+  +V  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            LLKEMKE G   ++VT++ ++ G CR+ K++ A  +  ++  +G   N  +Y  +L+  
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPE 483
           C+ G +++A ELL  M  RG  P   + + L+  LCK G   D A+ +F     G   P+
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKI-DMALKVFEDNSNGDCPPD 181

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
             +++ L+  +C+  +L  A +L +++
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKM 208



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/209 (20%), Positives = 92/209 (44%), Gaps = 3/209 (1%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY +++D   +  +      VL++M    C+ +   +  L+  F          ++  ++
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEM 488

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                 +P++    + +     +  ++ A+  L+   +    K +   + +++   C+ G
Sbjct: 489 VG-NGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTG 547

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            + +A E+L+ +K+S  + P    Y  LI GLC+     +A+E+ EEM    +  P+A  
Sbjct: 548 RMSAALELLEAIKQSG-TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEA 606

Query: 277 YNVLIDGFCRGGKVDRAKKIM-EFMKNNG 304
           Y  +I    R G+ + A  +  E + N G
Sbjct: 607 YEAVIQELAREGRHEEANALADELLGNKG 635



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 1/179 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   N  TY  ++D   R  K      +L +M     + +   + +L+  F      E
Sbjct: 455 KRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 514

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              +M  ++      K  + A    ++ L  + ++  A   L+   Q     P   I+  
Sbjct: 515 EARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS-GTPPRHDIYVA 573

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           LI+  C+   L  A EVL+EM  S+ S PN   Y  +I  L + GR  EA  L +E++ 
Sbjct: 574 LIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 632


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 222/438 (50%), Gaps = 15/438 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+   + + K    +  TY+T+++   +  + +    +LR+M        +GI  +++
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVT-----RDGIAPDVV 114

Query: 138 KHFSNC------SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            + S           +R  EM  ++  +   +P     S  +     + +VD A    K 
Sbjct: 115 TYTSVVDGLCRDGKMDRACEMVREMK-LKGVEPDKFTFSALITGWCNARKVDEALKLYKE 173

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                  KP+   +  LI   CK G LE A ++L  M + +   PN++TYS+L+ GLCK 
Sbjct: 174 ILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM-EGRKCVPNVVTYSSLLHGLCKA 232

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G   +A++LF  M SK  + P+ +TY  LI G C   KVD A+ +M+ M    C P+  +
Sbjct: 233 GDLDQALDLFRRMTSKGCV-PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVS 291

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  L++G+C+ G+++EAK++F EM      PD I YT L+  FC A R++EA  LL+ MK
Sbjct: 292 YNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351

Query: 372 -ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
              G   D+VT++I++ G  R  +  EA   ++++    +  N  +Y  +++  C+ G +
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           + A+E+L+ M+ +   P   T N ++  LC+ G  ++A   L  +   G +P   ++  L
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471

Query: 491 VELICRGRKLLFAFELLD 508
           +E   R  ++  A+EL +
Sbjct: 472 LEGFSRTGRMEIAYELFE 489



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 211/447 (47%), Gaps = 38/447 (8%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+  I+D   +  + +   A   +M  E    +E  +  ++       L  +  E+  ++
Sbjct: 9   TWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEM 67

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P L   ST +N   +  ++D A   L+       + P+   +  ++   C+ G
Sbjct: 68  RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDG 127

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            ++ A E+++EMK   +  P+  T+S LI G C   +  EA++L++E+++     PD +T
Sbjct: 128 KMDRACEMVREMKLKGVE-PDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVT 186

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF---- 332
           Y  LIDGFC+ G +++A K++  M+   C PNV  Y++L++G CK G L +A ++F    
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246

Query: 333 -------------------------------DEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                                          DEM      PDT+ Y  L++ +CR GR++
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIV 420
           EA +L KEM  + C  D +T+  ++ G C   ++EEA  +LE +    GI  +  +Y IV
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +    +     +A E ++ M+ R   P+  T + L+  LCKAG  + A   L  +V    
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426

Query: 481 KPESDSWALLVELICRGRKLLFAFELL 507
           +P   ++  ++  +CR   +  A++LL
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLL 453



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 164/278 (58%), Gaps = 5/278 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P ++T++ +IDG CK  + ++A+  FE+M  ++ + P+  TYNV+++G C+     +A +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKM--REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 296 IMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINC 353
           +++ M++     P++  Y+T++NGFCK+G++  A E+  EM     + PD + YT++++ 
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY-L 412
            CR G++D A E+++EMK +G + D  TF+ ++ G C   K++EAL + +++     +  
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y  +++  C+ G LEKA+++L +M  R  +P+  T + LL  LCKAG  + A    
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             +   G  P   ++  L+  +C   K+  A  L+DE+
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 280



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 193/410 (47%), Gaps = 10/410 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL+++  +     +  +  TY  ++D   +    E    +L  M    C  +   + +L+
Sbjct: 167 ALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLL 226

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    ++ L++F ++       P++   +T ++ L  +++VD A+  +        
Sbjct: 227 HGLCKAGDLDQALDLFRRMTS-KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC- 284

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+T  +N L+  +C+ G +E A ++ KEM  ++   P+ ITY+ L+ G C   R  EA
Sbjct: 285 CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMA-TKSCLPDRITYTCLVRGFCNASRLEEA 343

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L E M +   I PD +TY++++ G+ R  +   A + ++ M      PN   Y++L++
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 403

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G++  A EV   M N  ++P    + ++I   CR G +DEA +LL  M   G + 
Sbjct: 404 GLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 463

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-------YLNKASYRIVLNFSCQKGEL 430
            +VT+  +L G  R G++E A  + E +             + + ++  ++   C+  E+
Sbjct: 464 GMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREI 523

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +KA+ ++  +  R   P       ++  L +AG  E+A   +  + ++G 
Sbjct: 524 DKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 178/332 (53%), Gaps = 3/332 (0%)

Query: 164  PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
            P + + ST +N      ++D     ++   Q   LKPN+  +  +I   C+   L  A E
Sbjct: 702  PDVISYSTVINGYCRFGELDKVWKLIEKMKQK-GLKPNSYTYGSIIGLLCRICKLAEAEE 760

Query: 224  VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
               EM   Q   P+ I Y+TL+DG CK G  R A + F EM S+D I PD LTY  +I G
Sbjct: 761  AFSEMI-GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISG 818

Query: 284  FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            FC+ G +  A K+   M   G  P++  +T LMNG+CK G +++A  V + M      P+
Sbjct: 819  FCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPN 878

Query: 344  TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
             + YTTLI+  C+ G +D A ELL EM + G + +I T+N I+ GLC+ G IEEA+ ++ 
Sbjct: 879  VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938

Query: 404  KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +    G+  +  +Y  +++  C+ GE++KA E+L  ML +G  P   T N L+   C  G
Sbjct: 939  EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998

Query: 464  MAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            M ED    L  ++  G  P + ++  LV+  C
Sbjct: 999  MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYC 1030



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 173/311 (55%), Gaps = 2/311 (0%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+T ++  L+   CKRG + +A +   EM    ++ P+++TY+ +I G C+ G   EA +
Sbjct: 772  PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDMVEAGK 830

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            LF EM+ +  + PD +T+  L++G+C+ G +  A ++   M   GC+PNV  YTTL++G 
Sbjct: 831  LFHEMLCRG-LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            CKEG L  A E+  EM    L+P+   Y +++N  C++G ++EA++L+ E +  G  AD 
Sbjct: 890  CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 949

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            VT+  ++   C+ G++++A  +L ++   G+     ++ +++N  C  G LE   +LL  
Sbjct: 950  VTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            ML +G  P+  T N L+ + C     + A      +   G +P+  ++  LV+  C  R 
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARN 1069

Query: 500  LLFAFELLDEL 510
            +  A+ L  E+
Sbjct: 1070 MKEAWFLFQEM 1080



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 215/428 (50%), Gaps = 12/428 (2%)

Query: 87   EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNC 143
            E KG+  +  +Y+T+++   R+ + + V  ++ +M  +  K   +  G  + L+     C
Sbjct: 696  ELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI--C 753

Query: 144  SLHERVLEMFHKIHPITREK-PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
             L E   E F ++  I +   P     +T ++   +   +  A  F  Y      + P+ 
Sbjct: 754  KLAE-AEEAFSEM--IGQGILPDTIVYTTLVDGFCKRGDIRAASKFF-YEMHSRDITPDV 809

Query: 203  CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
              +  +I   C+ G +  A ++  EM    +  P++IT++ L++G CK G  ++A  +  
Sbjct: 810  LTYTAIISGFCQIGDMVEAGKLFHEMLCRGLE-PDIITFTELMNGYCKAGHIKDAFRVHN 868

Query: 263  EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
             M+ +    P+ +TY  LIDG C+ G +D A +++  M   G  PN+F Y +++NG CK 
Sbjct: 869  HMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927

Query: 323  GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            G ++EA ++  E +   L  DT+ YTTL++ +C++G +D+A E+L EM  +G +  IVTF
Sbjct: 928  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTF 987

Query: 383  NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
            N+++ G C  G +E+   +L  +   GI  N  ++  ++   C +  L+ A  + + M  
Sbjct: 988  NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCS 1047

Query: 443  RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            RG  P   T   L+   C A   ++A      +   GF     ++++L++   + +K + 
Sbjct: 1048 RGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVE 1107

Query: 503  AFELLDEL 510
            A E+ D++
Sbjct: 1108 AREIFDQM 1115



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 225/470 (47%), Gaps = 32/470 (6%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD-----KLARYKKFEAVDAVLRQM 121
           S++   + P  +   F+T+++ + F   +   A++ D     ++    K    + + R +
Sbjct: 442 SIVVFNRTPCPSFSDFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSL 501

Query: 122 TYETCKFH-EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
               CKF  + +   LMK    C  +  VL+ F      +R   +L+++   ++L + S 
Sbjct: 502 KPYECKFKTDHLIWVLMK--IKCD-YRLVLDFFDWAR--SRRDSNLESLCIVIHLAVASK 556

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCI---FNILIKHHCKRGT----LESAFEVLKE---MKK 230
            + +AQ+ +    +  +L         F++L+  +   G+     +  F+VL E   + +
Sbjct: 557 DLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPE 616

Query: 231 SQMSYPNLITYSTLID---------GLCKN-GRFREAIELFEEMVSKDQILPDALTYNVL 280
           ++  +  ++ Y  ++           L K+  +   AI +F E   +  +  +  +YN++
Sbjct: 617 ARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF-PEVGVCWNVASYNIV 675

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I   C+ G+++ A  ++  M+  G  P+V +Y+T++NG+C+ G+L +  ++ ++MK   L
Sbjct: 676 IHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGL 735

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           KP++  Y ++I   CR  ++ EA E   EM  +G   D + +  ++ G C+ G I  A  
Sbjct: 736 KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASK 795

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
              ++    I  +  +Y  +++  CQ G++ +A +L   MLCRG  P   T  EL+   C
Sbjct: 796 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYC 855

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           KAG  +DA      +++ G  P   ++  L++ +C+   L  A ELL E+
Sbjct: 856 KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 136/251 (54%), Gaps = 3/251 (1%)

Query: 164  PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
            P++   +T ++ L +   +D A   L +    + L+PN   +N ++   CK G +E A +
Sbjct: 877  PNVVTYTTLIDGLCKEGDLDSANELL-HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 935

Query: 224  VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            ++ E + + ++  + +TY+TL+D  CK+G   +A E+  EM+ K  + P  +T+NVL++G
Sbjct: 936  LVGEFEAAGLN-ADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG-LQPTIVTFNVLMNG 993

Query: 284  FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            FC  G ++  +K++ +M   G  PN   +  L+  +C    L+ A  ++ +M +  ++PD
Sbjct: 994  FCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053

Query: 344  TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
               Y  L+   C A  + EA  L +EMK +G    + T+++++ G  +  K  EA  + +
Sbjct: 1054 GKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFD 1113

Query: 404  KLWYDGIYLNK 414
            ++  DG+  +K
Sbjct: 1114 QMRRDGLAADK 1124



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 4/233 (1%)

Query: 151  EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
            E+ H++  I  + P++   ++ +N L +S  ++ A   +    +   L  +T  +  L+ 
Sbjct: 900  ELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKLVG-EFEAAGLNADTVTYTTLMD 957

Query: 211  HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             +CK G ++ A E+L EM    +  P ++T++ L++G C +G   +  +L   M++K  I
Sbjct: 958  AYCKSGEMDKAQEILTEMLGKGLQ-PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-I 1015

Query: 271  LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
             P+A T+N L+  +C    +  A  I + M + G  P+   Y  L+ G C    ++EA  
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWF 1075

Query: 331  VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +F EMK          Y+ LI  F +  +  EA E+  +M+  G  AD   F+
Sbjct: 1076 LFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD 1128



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 129/285 (45%), Gaps = 4/285 (1%)

Query: 88   QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            Q G + N  TY T++D L +    ++ + +L +M     + +   + +++         E
Sbjct: 872  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931

Query: 148  RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              +++  +         ++   +T ++   +S ++D AQ  L        L+P    FN+
Sbjct: 932  EAVKLVGEFEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILT-EMLGKGLQPTIVTFNV 989

Query: 208  LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            L+   C  G LE   ++L  M    ++ PN  T++ L+   C     + A  ++++M S+
Sbjct: 990  LMNGFCLHGMLEDGEKLLNWMLAKGIA-PNATTFNCLVKQYCIRNNLKAATAIYKDMCSR 1048

Query: 268  DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              + PD  TY  L+ G C    +  A  + + MK  G + +V  Y+ L+ GF K  K  E
Sbjct: 1049 G-VEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVE 1107

Query: 328  AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            A+E+FD+M+   L  D   +    +   +  R D  ++ + E+ E
Sbjct: 1108 AREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE-GKLQEAKEV 331
           D   ++V        G +  A+K+ E M N G   +V +    +    K+  K   A  V
Sbjct: 597 DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F E     +  +   Y  +I+  C+ GR++EA  LL  M+ +G   D+++++ ++ G CR
Sbjct: 657 FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G++++   ++EK+   G+  N  +Y  ++   C+  +L +A E    M+ +G LP    
Sbjct: 717 FGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIV 776

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L+   CK G    A+   + +      P+  ++  ++   C+   ++ A +L  E++
Sbjct: 777 YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/314 (35%), Positives = 179/314 (57%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I  +CK   +  AF++L+ M    ++ PNLI+Y+ +I+GLC+ G+ +E  E
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLN-PNLISYNVVINGLCREGQMKETSE 294

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + EEM SK + +PD +T+N LI+G+C  G   +A  +   M  NG +PNV  YTTL+N  
Sbjct: 295 ILEEM-SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G L  A E  D+M++  L P+   YTTLI+ F + G + +A +++KEM E G    I
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N ++ G C  G++E+A G+L+++   G   +  SY  +++  C+  ELEKA +L   
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P  AT + L+  LCK     +       ++ +G  P+  ++  L+   C    
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 500 LLFAFELLDELVIK 513
           L  A  L DE++ K
Sbjct: 534 LDKALRLHDEMIQK 547



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 236/482 (48%), Gaps = 35/482 (7%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +T +DA  + R I  G A  L++              +   KG N N  +Y  +
Sbjct: 236 PNVVTYNTIIDAYCKLRKI--GEAFKLLR--------------LMALKGLNPNLISYNVV 279

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           ++ L R  + +    +L +M+          F  L+  + N     + L + H       
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKNG 338

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
             P++   +T +N + ++  ++ A  FL        L PN   +  LI    ++G L+ A
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           ++++KEM ++  + P +ITY+ LI+G C  GR  +A  L +EM+ +   +PD ++Y+ +I
Sbjct: 398 YQIMKEMVENGFT-PTIITYNALINGHCILGRMEDASGLLQEMIERG-FIPDVVSYSTII 455

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            GFCR  ++++A ++   M   G +P+V  Y++L+ G CK+ +L E  ++F EM +  L 
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLP 515

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + YT+LIN +C  G +D+AL L  EM ++G   DIVT+N+++ G  ++ + +EA  +
Sbjct: 516 PDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRL 575

Query: 402 LEKLWYDGIYLNKASYRIV------LNFS---------CQKGELEKAIELLRLMLCRGFL 446
           L KL Y+    N+ +Y  +      L F          C KG + +A  +L  ML +G+ 
Sbjct: 576 LLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK 635

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            +    N ++    K G  E A      ++  GF P S +   L + +    K +   +L
Sbjct: 636 LNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQL 695

Query: 507 LD 508
           LD
Sbjct: 696 LD 697



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 228/441 (51%), Gaps = 10/441 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKK-FEAVDAVLRQMTYETCKFHEGIFLNL 136
           AL I N +++  GF     +Y  ILD + R K+  +  + + ++M       +   +  L
Sbjct: 151 ALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           ++ F      E  L  F ++    R    P++   +T ++   +  ++  A   L+    
Sbjct: 210 IRGFCTAGNLEMGLXFFGEME---RNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMAL 266

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              L PN   +N++I   C+ G ++   E+L+EM K +   P+ +T++TLI+G C  G F
Sbjct: 267 K-GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRY-VPDRVTFNTLINGYCNVGNF 324

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A+ L  EMV K+ + P+ +TY  LI+  C+ G ++RA + ++ M++ G +PN   YTT
Sbjct: 325 HQALVLHAEMV-KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++GF ++G L++A ++  EM      P  I Y  LIN  C  GR+++A  LL+EM ERG
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+V+++ I+ G CR  ++E+A  +  ++   GI  + A+Y  ++   C++  L +  
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +L + ML  G  P   T   L+   C  G  + A      +++ GF P+  ++ +L+   
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563

Query: 495 CRGRKLLFAFELLDELVIKES 515
            +  +   A  LL +L+ +ES
Sbjct: 564 NKQSRTKEAKRLLLKLLYEES 584


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/314 (35%), Positives = 179/314 (57%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I  +CK   +  AF++L+ M    ++ PNLI+Y+ +I+GLC+ G+ +E  E
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLN-PNLISYNVVINGLCREGQMKETSE 294

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + EEM SK + +PD +T+N LI+G+C  G   +A  +   M  NG +PNV  YTTL+N  
Sbjct: 295 ILEEM-SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G L  A E  D+M++  L P+   YTTLI+ F + G + +A +++KEM E G    I
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N ++ G C  G++E+A G+L+++   G   +  SY  +++  C+  ELEKA +L   
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P  AT + L+  LCK     +       ++ +G  P+  ++  L+   C    
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 500 LLFAFELLDELVIK 513
           L  A  L DE++ K
Sbjct: 534 LDKALRLHDEMIQK 547



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 236/482 (48%), Gaps = 35/482 (7%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +T +DA  + R I  G A  L++              +   KG N N  +Y  +
Sbjct: 236 PNVVTYNTIIDAYCKLRKI--GEAFKLLR--------------LMALKGLNPNLISYNVV 279

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           ++ L R  + +    +L +M+          F  L+  + N     + L + H       
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKNG 338

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
             P++   +T +N + ++  ++ A  FL        L PN   +  LI    ++G L+ A
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           ++++KEM ++  + P +ITY+ LI+G C  GR  +A  L +EM+ +   +PD ++Y+ +I
Sbjct: 398 YQIMKEMVENGFT-PTIITYNALINGHCILGRMEDASGLLQEMIERG-FIPDVVSYSTII 455

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            GFCR  ++++A ++   M   G +P+V  Y++L+ G CK+ +L E  ++F EM +  L 
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLP 515

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + YT+LIN +C  G +D+AL L  EM ++G   DIVT+N+++ G  ++ + +EA  +
Sbjct: 516 PDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRL 575

Query: 402 LEKLWYDGIYLNKASYRIV------LNFS---------CQKGELEKAIELLRLMLCRGFL 446
           L KL Y+    N+ +Y  +      L F          C KG + +A  +L  ML +G+ 
Sbjct: 576 LLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK 635

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            +    N ++    K G  E A      ++  GF P S +   L + +    K +   +L
Sbjct: 636 LNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQL 695

Query: 507 LD 508
           LD
Sbjct: 696 LD 697



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 179/318 (56%), Gaps = 2/318 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N++I   C+ G ++   E+L+EM K +   P+ +T++TLI+G C  G F +A
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRY-VPDRVTFNTLINGYCNVGNFHQA 327

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L  EMV K+ + P+ +TY  LI+  C+ G ++RA + ++ M++ G +PN   YTTL++
Sbjct: 328 LVLHAEMV-KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF ++G L++A ++  EM      P  I Y  LIN  C  GR+++A  LL+EM ERG   
Sbjct: 387 GFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V+++ I+ G CR  ++E+A  +  ++   GI  + A+Y  ++   C++  L +  +L 
Sbjct: 447 DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF 506

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + ML  G  P   T   L+   C  G  + A      +++ GF P+  ++ +L+    + 
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566

Query: 498 RKLLFAFELLDELVIKES 515
            +   A  LL +L+ +ES
Sbjct: 567 SRTKEAKRLLLKLLYEES 584


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 188/341 (55%), Gaps = 3/341 (0%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
            T +N L +  Q   A   L+  +  L ++PN  ++N +I   CK   +  AF++  EM 
Sbjct: 165 GTLINGLCKVGQTSAALQLLRRVDGKL-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
              +S P+++TYS LI G C  G+  +AI LF +M+S ++I PD  T+++L+DGFC+ G+
Sbjct: 224 SKGIS-PDVVTYSALISGFCILGKLNDAIGLFNKMIS-EEINPDVYTFSILVDGFCKEGR 281

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           V  AK ++  M   G  P+V  Y +LM+G+C   ++ +AK +F+ M    +  +   Y  
Sbjct: 282 VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNI 341

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +IN FC+  +VDEA+ L KEM  +    D+VT+N ++ GLC+ GKI  AL +++++   G
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  +K +Y  +L+  C+  +++KAI LL  M   G  P   T   L+  LCK G  +DA 
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                L+  G+     ++ ++++  C       A  LL ++
Sbjct: 462 NIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM 502



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 220/417 (52%), Gaps = 6/417 (1%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  IL  L +   ++   ++ R+M +         F  L+  FS          +F  I 
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANIL 118

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
               E P+   ++T +  L    Q+  A +F       L    N   +  LI   CK G 
Sbjct: 119 KKGYE-PNAITLTTLIKGLCLKGQIHQALHFHD-KVVALGFHLNKVCYGTLINGLCKVGQ 176

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
             +A ++L+ +   ++  PN++ Y+T+ID +CK     EA +L+ EMVSK  I PD +TY
Sbjct: 177 TSAALQLLRRVD-GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG-ISPDVVTY 234

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           + LI GFC  GK++ A  +   M +   NP+V+ ++ L++GFCKEG+++EAK V   M  
Sbjct: 235 SALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMK 294

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             +KPD + Y +L++ +C   +V++A  +   M + G  A++ ++NI++ G C+  K++E
Sbjct: 295 QGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDE 354

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH-YATSNELL 456
           A+ + +++    I  +  +Y  +++  C+ G++  A++L+  M  RG +PH   T N +L
Sbjct: 355 AMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG-VPHDKITYNSIL 413

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             LCK    + A   L  + + G +P+  ++ +L++ +C+G +L  A  + ++L++K
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVK 470



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 198/402 (49%), Gaps = 39/402 (9%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF+ N   Y T+++ L +  +  A   +LR++  +  +              N  ++  +
Sbjct: 156 GFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQ-------------PNVVMYNTI 202

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           ++   K+          K ++   +L  E     ++              P+   ++ LI
Sbjct: 203 IDSMCKV----------KLVNEAFDLYSEMVSKGIS--------------PDVVTYSALI 238

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C  G L  A  +  +M   +++ P++ T+S L+DG CK GR +EA  +   M+ K  
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEIN-PDVYTFSILVDGFCKEGRVKEAKNVL-AMMMKQG 296

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I PD +TY  L+DG+C   +V++AK I   M   G   NV +Y  ++NGFCK  K+ EA 
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +F EM    + PD + Y +LI+  C++G++  AL+L+ EM +RG   D +T+N IL  L
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+  ++++A+ +L K+  +GI  +  +Y I+++  C+ G L+ A  +   +L +G+    
Sbjct: 417 CKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            T   ++   C   + + A   L  + + G  P + ++ +++
Sbjct: 477 YTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 191/387 (49%), Gaps = 7/387 (1%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +   AL++   V + K    N   Y TI+D + + K       +  +M  +        +
Sbjct: 176 QTSAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTY 234

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
             L+  F         + +F+K+  I+ E  P +   S  ++   +  +V  A+N L   
Sbjct: 235 SALISGFCILGKLNDAIGLFNKM--ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            +   +KP+   +  L+  +C    +  A  +   M +  ++  N+ +Y+ +I+G CK  
Sbjct: 293 MKQ-GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVT-ANVQSYNIMINGFCKIK 350

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EA+ LF+EM  K+ I+PD +TYN LIDG C+ GK+  A K+++ M + G   +   Y
Sbjct: 351 KVDEAMNLFKEMHCKN-IIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITY 409

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            ++++  CK  ++ +A  +  +MK+  ++PD   YT LI+  C+ GR+ +A  + +++  
Sbjct: 410 NSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLV 469

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G    + T+ +++ G C     ++AL +L K+  +G   N  +Y I++    +K E + 
Sbjct: 470 KGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDM 529

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRL 459
           A +LLR M+ RG L  +  +  L  R 
Sbjct: 530 AEKLLREMIARGLLFGWKKAYCLFTRF 556



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 102/208 (49%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +F +  ++    K    Q A  +  EM+   +  D + +  LINCF + G    +  +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              + ++G + + +T   ++ GLC +G+I +AL   +K+   G +LNK  Y  ++N  C+
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+   A++LLR +  +   P+    N ++  +CK  +  +A      +V  G  P+  +
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 487 WALLVELICRGRKLLFAFELLDELVIKE 514
           ++ L+   C   KL  A  L ++++ +E
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEE 261


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 213/436 (48%), Gaps = 41/436 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALEIF     + G      TY TI++ L +  +  A                        
Sbjct: 64  ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA------------------------ 99

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  L E +++  H         P +   +T ++ L ++  ++ A+  L        
Sbjct: 100 ----GMELFEELVKRGH--------HPDVVTYNTLIDSLCKAGDLEEARR-LHGGMSSRG 146

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFRE 256
             PN   +++LI   CK G ++ A E+++EM +KS    PN+ITY++ +DGLCK     E
Sbjct: 147 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 206

Query: 257 AIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           A EL   +     ++ PD +T++ LIDG C+ G+ D A    + M   G  PNV  Y  L
Sbjct: 207 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNAL 264

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK  K++ A  + + M +  + PD I Y+ L++ FC+A RVDEALELL  M  RGC
Sbjct: 265 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 324

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             ++VTFN I+ GLC+  +  EA  +  +++   +  +K ++ I++  +C+ G  E+A  
Sbjct: 325 TPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASA 384

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   M+ +   P   T   L+  LCKAG  E A   L  +  +G  P   ++ +LV  +C
Sbjct: 385 LFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLC 444

Query: 496 RGRKLLFAFELLDELV 511
           +  ++    E L+E+V
Sbjct: 445 KSGRIEEPCEFLEEMV 460



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 228/441 (51%), Gaps = 13/441 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            +E+F  +  ++G + +  TY T++D L +    E    +   M+   C  +   +  L+
Sbjct: 100 GMELFEELV-KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK----PSLKAISTCLNLLIESNQVDLAQNFLK-YS 192
                     R+ E    I  +TR+     P++   ++ L+ L + +    A   ++   
Sbjct: 159 NGLCKVG---RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 215

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           +  LR+ P+T  F+ LI   CK G  +   E   +   +    PN++TY+ L++GLCK  
Sbjct: 216 DGSLRVSPDTVTFSTLIDGLCKCGQTD---EACNDDMIAGGYVPNVVTYNALVNGLCKAD 272

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +   A  + E MV K  + PD +TY+VL+D FC+  +VD A +++  M + GC PNV  +
Sbjct: 273 KMERAHAMIESMVDKG-VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            ++++G CK  +  EA ++  ++ N +L PD + +  LI   C+AG  ++A  L +EM  
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +  + D++TF  ++ GLC+ G++E A  +L+ +   G+  N  +Y ++++  C+ G +E+
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             E L  M+  G +P   T   L+  LC+A   +DA   +  L   G+ P++ ++ +LV+
Sbjct: 452 PCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVD 511

Query: 493 LICRGRKLLFAFELLDELVIK 513
            + +  K   A  +L+E+V K
Sbjct: 512 GLWKSGKTEQAITVLEEMVGK 532



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 181/349 (51%), Gaps = 44/349 (12%)

Query: 205 FNILIKHHCKRGTLESAFEVLK-EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +NI+++  C+ G    A E+ + EM +  ++ P ++TY+T+I+GLCK+      +ELFEE
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVA-PTIVTYNTIINGLCKSNELGAGMELFEE 106

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           +V +    PD +TYN LID  C+ G ++ A+++   M + GC PNV  Y+ L+NG CK G
Sbjct: 107 LVKRGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVG 165

Query: 324 KLQEAKEVFDEM--------------KNFL-------------------------LKPDT 344
           ++ EA+E+  EM               +FL                         + PDT
Sbjct: 166 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 225

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + ++TLI+  C+ G+ DEA     +M   G   ++VT+N ++ GLC+  K+E A  M+E 
Sbjct: 226 VTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIES 283

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+  +  +Y ++++  C+   +++A+ELL  M  RG  P+  T N ++  LCK+  
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           + +A      +      P+  ++ +L+   C+      A  L +E+V K
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 392



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 211/429 (49%), Gaps = 8/429 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSL 145
            +G   N  TY+ +++ L +  + +    ++++MT ++C     I  + + +      S+
Sbjct: 144 SRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 203

Query: 146 HERVLEMFHKIHPIT-REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
                E+   +   + R  P     ST ++ L +  Q D A N    +  ++   PN   
Sbjct: 204 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYV---PNVVT 260

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+   CK   +E A  +++ M    ++ P++ITYS L+D  CK  R  EA+EL   M
Sbjct: 261 YNALVNGLCKADKMERAHAMIESMVDKGVT-PDVITYSVLVDAFCKASRVDEALELLHGM 319

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            S+    P+ +T+N +IDG C+  +   A +I   + N    P+   +  L+ G CK G 
Sbjct: 320 ASRG-CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            ++A  +F+EM    ++PD + +  LI+  C+AG+V+ A ++L  M   G   ++VT+N+
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC+ G+IEE    LE++   G      +Y  ++   C+    + A++L+  +   G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           + P   T N L+  L K+G  E A   L  +V  G +P+S ++A     + R   L    
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTM 558

Query: 505 ELLDELVIK 513
           ELL  ++ K
Sbjct: 559 ELLRVVLAK 567



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 104/194 (53%), Gaps = 5/194 (2%)

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           +V +Y  ++   C+ G+   A E+F  EM    + P  + Y T+IN  C++  +   +EL
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
            +E+ +RG   D+VT+N ++  LC+ G +EEA  +   +   G   N  +Y +++N  C+
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 427 KGELEKAIELLRLMLCRG--FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK--P 482
            G +++A EL++ M  +    LP+  T N  L  LCK  M  +A   +  L +   +  P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 483 ESDSWALLVELICR 496
           ++ +++ L++ +C+
Sbjct: 224 DTVTFSTLIDGLCK 237



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 1/142 (0%)

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLE-KLWYDGIYLNKASYRIVLNFSCQKGELE 431
           R     +  +NI+L  LCR G+   AL +   ++  DG+     +Y  ++N  C+  EL 
Sbjct: 39  RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 98

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             +EL   ++ RG  P   T N L+  LCKAG  E+A     G+   G  P   ++++L+
Sbjct: 99  AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158

Query: 492 ELICRGRKLLFAFELLDELVIK 513
             +C+  ++  A EL+ E+  K
Sbjct: 159 NGLCKVGRIDEARELIQEMTRK 180


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 198/353 (56%), Gaps = 6/353 (1%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R K S+ + +  L+ L++ N+    + F+       ++ PN   FN +I   CK G L  
Sbjct: 190 RYKLSVLSCNPLLSALVKENEFGGVE-FVYKEMIRRKISPNLITFNTVINGLCKVGKLNK 248

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR---FREAIELFEEMVSKDQILPDALTY 277
           A +V+ +MK     +PN++TY+TLIDG CK GR     +A  + +EMV ++++ P+++T+
Sbjct: 249 AGDVVDDMKVWGF-WPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV-ENKVSPNSVTF 306

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           NVLIDGFC+   +  A K+ E M++ G  P V  Y +L+NG C EGKL EAK + DEM +
Sbjct: 307 NVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLS 366

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             LKP+ I Y  LIN +C+   ++EA EL   + ++G   +++TFN +L G C+ GK+EE
Sbjct: 367 SNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEE 426

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  + + +   G   N ++Y  ++   C++G++E+   LL  M CRG      T N L+ 
Sbjct: 427 AFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILIS 486

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             C+    + AA  +  +++ G KP   ++ +L+   C    L  A  L  ++
Sbjct: 487 AWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQM 539



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 177/299 (59%), Gaps = 8/299 (2%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ PN+  FN+LI   CK   L +A +V +EM+ SQ   P ++TY++L++GLC  G+  E
Sbjct: 298 KVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQ-SQGLKPTVVTYNSLVNGLCNEGKLNE 356

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L +EM+S + + P+ +TYN LI+G+C+   ++ A+++ + +   G  PNV  + TL+
Sbjct: 357 AKVLLDEMLSSN-LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415

Query: 317 NGFCKEGKLQEA---KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +G+CK GK++EA   ++V  E K FL  P+   Y  LI  FCR G+++E   LL EM+ R
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLE-KGFL--PNASTYNCLIVGFCREGKMEEVKNLLNEMQCR 472

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G KAD VT+NI++   C + + ++A  +++++   G+  +  +Y I+LN  C +G L  A
Sbjct: 473 GVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAA 532

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + L + M   G   +  T N L+   C+ G  EDA   L  ++E G  P   ++ ++ E
Sbjct: 533 LNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKE 591



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 231/444 (52%), Gaps = 26/444 (5%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P   L  FN    +   N++      +L+ LA  K +  + ++L               
Sbjct: 86  DPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDS------------- 132

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL-LIESNQVDLAQNFLKYS 192
              +K  +NCS+      +FH +   + +  +   I+  L L  +E+++  L     K +
Sbjct: 133 --FVKGETNCSISL----IFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRA 186

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
             + R K +    N L+    K         V KEM + ++S PNLIT++T+I+GLCK G
Sbjct: 187 GDY-RYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKIS-PNLITFNTVINGLCKVG 244

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFC---RGGKVDRAKKIMEFMKNNGCNPNV 309
           +  +A ++ ++M       P+ +TYN LIDG+C   R GK+ +A  I++ M  N  +PN 
Sbjct: 245 KLNKAGDVVDDMKVWG-FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNS 303

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             +  L++GFCK+  L  A +VF+EM++  LKP  + Y +L+N  C  G+++EA  LL E
Sbjct: 304 VTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDE 363

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M     K +++T+N ++ G C++  +EEA  + + +   G+  N  ++  +L+  C+ G+
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +E+A  L ++ML +GFLP+ +T N L+V  C+ G  E+    L  +   G K ++ ++ +
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+   C  ++   A  L+DE++ K
Sbjct: 484 LISAWCEKKEPKKAARLIDEMLDK 507



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 186/387 (48%), Gaps = 42/387 (10%)

Query: 90  GFNHNNATYATILD---KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           GF  N  TY T++D   K+ R  K    DA+L++M       +   F  L+  F      
Sbjct: 260 GFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENL 319

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              L++F ++                                     Q   LKP    +N
Sbjct: 320 SAALKVFEEM-------------------------------------QSQGLKPTVVTYN 342

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L+   C  G L  A  +L EM  S +  PN+ITY+ LI+G CK     EA ELF+  + 
Sbjct: 343 SLVNGLCNEGKLNEAKVLLDEMLSSNLK-PNVITYNALINGYCKKKLLEEARELFDN-IG 400

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + P+ +T+N L+ G+C+ GK++ A  + + M   G  PN   Y  L+ GFC+EGK++
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           E K + +EM+   +K DT+ Y  LI+ +C      +A  L+ EM ++G K   +T+NI+L
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILL 520

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C EG +  AL + +++  +G + N  +Y +++   C+KG+LE A  LL  ML +G +
Sbjct: 521 NGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLI 580

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALF 473
           P+  T   +   + + G   D    L+
Sbjct: 581 PNRTTYEIIKEEMMEKGFLPDIEGHLY 607


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 193/363 (53%), Gaps = 7/363 (1%)

Query: 135  NLMKHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
            N++ HF  C L  R+ E  H +    +    P + + ST +N      ++D     ++  
Sbjct: 693  NIVIHFV-CQLG-RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750

Query: 193  NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
             +   LKPN+ I+  +I   C+   L  A E   EM + Q   P+ + Y+TLIDG CK G
Sbjct: 751  KRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVYTTLIDGFCKRG 808

Query: 253  RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              R A + F EM S+D I PD LTY  +I GFC+ G +  A K+   M   G  P+   +
Sbjct: 809  DIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867

Query: 313  TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            T L+NG+CK G +++A  V + M      P+ + YTTLI+  C+ G +D A ELL EM +
Sbjct: 868  TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927

Query: 373  RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
             G + +I T+N I+ GLC+ G IEEA+ ++ +    G+  +  +Y  +++  C+ GE++K
Sbjct: 928  IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 987

Query: 433  AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
            A E+L+ ML +G  P   T N L+   C  GM ED    L  ++  G  P + ++  LV+
Sbjct: 988  AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 1047

Query: 493  LIC 495
              C
Sbjct: 1048 QYC 1050



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 174/311 (55%), Gaps = 2/311 (0%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+T ++  LI   CKRG + +A +   EM    ++ P+++TY+ +I G C+ G   EA +
Sbjct: 792  PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDMVEAGK 850

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            LF EM  K  + PD++T+  LI+G+C+ G +  A ++   M   GC+PNV  YTTL++G 
Sbjct: 851  LFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            CKEG L  A E+  EM    L+P+   Y +++N  C++G ++EA++L+ E +  G  AD 
Sbjct: 910  CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            VT+  ++   C+ G++++A  +L+++   G+     ++ +++N  C  G LE   +LL  
Sbjct: 970  VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            ML +G  P+  T N L+ + C     + A      +   G  P+  ++  LV+  C+ R 
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 1089

Query: 500  LLFAFELLDEL 510
            +  A+ L  E+
Sbjct: 1090 MKEAWFLFQEM 1100



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 216/427 (50%), Gaps = 10/427 (2%)

Query: 87   EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN-CSL 145
            E KG+  +  +Y+T+++   R+ + + V  ++  M  +  K +  I+ +++      C L
Sbjct: 716  ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 775

Query: 146  HERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
             E   E F ++    R+   P     +T ++   +   +  A  F  Y      + P+  
Sbjct: 776  AE-AEEAFSEM---IRQGILPDTVVYTTLIDGFCKRGDIRAASKFF-YEMHSRDITPDVL 830

Query: 204  IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
             +  +I   C+ G +  A ++  EM    +  P+ +T++ LI+G CK G  ++A  +   
Sbjct: 831  TYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMKDAFRVHNH 889

Query: 264  MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
            M+ +    P+ +TY  LIDG C+ G +D A +++  M   G  PN+F Y +++NG CK G
Sbjct: 890  MI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 948

Query: 324  KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
             ++EA ++  E +   L  DT+ YTTL++ +C++G +D+A E+LKEM  +G +  IVTFN
Sbjct: 949  NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 1008

Query: 384  IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            +++ G C  G +E+   +L  +   GI  N  ++  ++   C +  L+ A  + + M  R
Sbjct: 1009 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 1068

Query: 444  GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
            G  P   T   L+   CKA   ++A      +   GF     ++++L++   + +K L A
Sbjct: 1069 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 1128

Query: 504  FELLDEL 510
             E+ D++
Sbjct: 1129 REVFDQM 1135



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 135/246 (54%), Gaps = 2/246 (0%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            PN   +  LI   CK G L+SA E+L EM K  +  PN+ TY+++++GLCK+G   EA++
Sbjct: 897  PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVK 955

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            L  E  +   +  D +TY  L+D +C+ G++D+A++I++ M   G  P +  +  LMNGF
Sbjct: 956  LVGEFEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            C  G L++ +++ + M    + P+   + +L+  +C    +  A  + K+M  RG   D 
Sbjct: 1015 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             T+  ++ G C+   ++EA  + +++   G  ++ ++Y +++    ++ +  +A E+   
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 1134

Query: 440  MLCRGF 445
            M   G 
Sbjct: 1135 MRREGL 1140



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 215/455 (47%), Gaps = 32/455 (7%)

Query: 82  FNTVSEQKGFNHNNATYATILD-----KLARYKKFEAVDAVLRQMTYETCKFH-EGIFLN 135
           F+T+++ + F   +   A++ D     ++    K    + + R +    CKF  + +   
Sbjct: 477 FSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWV 536

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           LMK    C  +  VL+ F      +R   +L+++   ++L + S  + +AQ+ +    + 
Sbjct: 537 LMK--IKCD-YRLVLDFFDWAR--SRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWER 591

Query: 196 LRLKPNTCI---FNILIKHHCKRGTLESAFEVLKE-------MKKSQMSYPNLITYSTLI 245
            +L         F++L+  +   G+    F+V  +       +++++  +  ++ Y  ++
Sbjct: 592 PKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVL 651

Query: 246 D---------GLCKN-GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
                      L K+  +   AI +F E   +  +  +  +YN++I   C+ G++  A  
Sbjct: 652 SVDSCNVYLTRLSKDCYKTATAIIVFREF-PEVGVCWNVASYNIVIHFVCQLGRIKEAHH 710

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M+  G  P+V +Y+T++NG+C+ G+L +  ++ + MK   LKP++  Y ++I   C
Sbjct: 711 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 770

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R  ++ EA E   EM  +G   D V +  ++ G C+ G I  A     ++    I  +  
Sbjct: 771 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 830

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  CQ G++ +A +L   M C+G  P   T  EL+   CKAG  +DA      +
Sbjct: 831 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 890

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           ++ G  P   ++  L++ +C+   L  A ELL E+
Sbjct: 891 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 925



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 138/251 (54%), Gaps = 3/251 (1%)

Query: 164  PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
            P++   +T ++ L +   +D A   L +    + L+PN   +N ++   CK G +E A +
Sbjct: 897  PNVVTYTTLIDGLCKEGDLDSANELL-HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955

Query: 224  VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            ++ E + + ++  + +TY+TL+D  CK+G   +A E+ +EM+ K  + P  +T+NVL++G
Sbjct: 956  LVGEFEAAGLN-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNG 1013

Query: 284  FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            FC  G ++  +K++ +M   G  PN   + +L+  +C    L+ A  ++ +M +  + PD
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073

Query: 344  TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
               Y  L+   C+A  + EA  L +EMK +G    + T+++++ G  +  K  EA  + +
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133

Query: 404  KLWYDGIYLNK 414
            ++  +G+  +K
Sbjct: 1134 QMRREGLAADK 1144



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 4/295 (1%)

Query: 89   KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
            KG   ++ T+  +++   +    +    V   M    C  +   +  L+         + 
Sbjct: 858  KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917

Query: 149  VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              E+ H++  I  + P++   ++ +N L +S  ++ A   +    +   L  +T  +  L
Sbjct: 918  ANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKLVG-EFEAAGLNADTVTYTTL 975

Query: 209  IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
            +  +CK G ++ A E+LKEM    +  P ++T++ L++G C +G   +  +L   M++K 
Sbjct: 976  MDAYCKSGEMDKAQEILKEMLGKGLQ-PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034

Query: 269  QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
             I P+A T+N L+  +C    +  A  I + M + G  P+   Y  L+ G CK   ++EA
Sbjct: 1035 -IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093

Query: 329  KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
              +F EMK          Y+ LI  F +  +  EA E+  +M+  G  AD   F+
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 4/285 (1%)

Query: 88   QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            Q G + N  TY T++D L +    ++ + +L +M     + +   + +++         E
Sbjct: 892  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951

Query: 148  RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              +++  +         ++   +T ++   +S ++D AQ  LK       L+P    FN+
Sbjct: 952  EAVKLVGEFEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILK-EMLGKGLQPTIVTFNV 1009

Query: 208  LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            L+   C  G LE   ++L  M    ++ PN  T+++L+   C     + A  ++++M S+
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIA-PNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 1068

Query: 268  DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              + PD  TY  L+ G C+   +  A  + + MK  G + +V  Y+ L+ GF K  K  E
Sbjct: 1069 G-VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 1127

Query: 328  AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            A+EVFD+M+   L  D   +    +   +  R D  ++ + E+ E
Sbjct: 1128 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 244/499 (48%), Gaps = 44/499 (8%)

Query: 64  AAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTY 123
           A + ++  + + Q AL  F    +Q+G++HN   Y T++D L R K F  + ++L++M  
Sbjct: 185 AVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQT 244

Query: 124 ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSL--KAISTCLNLLIESNQ 181
           +  +    +  + +  +      +  LE F+ +  +  E P L   A ++ L  L+++ +
Sbjct: 245 QGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYE-PGLIDTAYNSVLVSLVKNKK 303

Query: 182 VDLAQNF-------------LKYSN--QHLRLK-------------------PNTCIFNI 207
           +D+A+N              L Y++  Q   LK                   P+   + I
Sbjct: 304 LDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTI 363

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CKR  +E A+ VL++M+++    PN+ TY+ LI GLC   R  EA+EL   ++ +
Sbjct: 364 VISALCKRKMIEQAYGVLQKMRENGCE-PNIYTYNALIQGLCAVRRPEEALELVT-LMEQ 421

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + P+  TY +L  G C+  ++DRAK++       G  PN   Y TL+NG+C+  +L E
Sbjct: 422 GGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIE 481

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++  EM      PD + YTTLI    +  ++ +AL +  EM+ +G   +  T NI+  
Sbjct: 482 AMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILAR 541

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL R G  ++A     ++   G   + + Y + ++     GE+E+A  LL  M+ +G+ P
Sbjct: 542 GLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSP 601

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV-ELICRGR----KLLF 502
           +  T N ++   C+ G  +DA   L  ++E G  P++ S+ +L+ E   +GR      L+
Sbjct: 602 NLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLY 661

Query: 503 AFELLDELVIKESGTIQVP 521
           A  L   +V+     IQ P
Sbjct: 662 ATALERGVVLNPKPVIQEP 680


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 223/431 (51%), Gaps = 10/431 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T +++L+     K+     A++ QM  E     + +  N + H     LH + 
Sbjct: 146 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV-EMGYKPDTVTFNTLIH--GLFLHNKA 202

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    I  +     +P L    T +N L +   +DLA + LK   +  +++ N  I+N 
Sbjct: 203 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEANVVIYNT 261

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK   ++ AF++  +M+   +  P++ TY++LI  LC  GR+ +A  L  +M+ +
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIK-PDVFTYNSLISCLCNYGRWSDASRLLSDMIER 320

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I P+ +T+N LID F + GK+  A+K+ + M     +PN+  Y +L+NGFC   +L E
Sbjct: 321 -KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+++F  M +    PD + Y TLI  FC+A RV+E +EL +EM +RG   + VT+N ++ 
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G  + A  + +K+  DG+  +  +Y I+L+  C+ G+LEKA+ +   +      P
Sbjct: 440 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 499

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T N ++  +CKAG  ED       L   G KP    +  ++   CR      A  L 
Sbjct: 500 NIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 559

Query: 508 DELVIKESGTI 518
            E+  KE GT+
Sbjct: 560 REM--KEDGTL 568



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 204/402 (50%), Gaps = 4/402 (0%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+++ L +    +   ++L++M     + +  I+  ++         +   ++F+K+
Sbjct: 223 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM 282

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                 KP +   ++ ++ L    +   A   L    +  ++ PN   FN LI    K G
Sbjct: 283 ET-KGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFNSLIDAFAKEG 340

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            L  A ++  EM +  +  PN++TY++LI+G C + R  EA ++F  MVSKD  LPD +T
Sbjct: 341 KLIEAEKLFDEMIQRSID-PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD-CLPDVVT 398

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN LI GFC+  +V+   ++   M   G   N   Y TL+ G  + G    A+++F +M 
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +  + PD I Y+ L++  C+ G++++AL + + +++   + +I T+NI++ G+C+ GK+E
Sbjct: 459 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVE 518

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +   +   L   G+  N   Y  +++  C+KG  E+A  L R M   G LP     N L+
Sbjct: 519 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
               + G    +A  +  +   GF  ++ + ++++ ++  GR
Sbjct: 579 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 620



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 157/295 (53%), Gaps = 4/295 (1%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-DALT 276
           L+ A  +  EM KS+  +P++I +S L+  + K  +F   I L E+M  ++  +P +  T
Sbjct: 62  LDDAVALFGEMVKSR-PFPSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYT 118

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y++L++ FCR  ++  A  ++  M   G  P++   ++L+NG+C   ++ EA  + D+M 
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               KPDT+ + TLI+      +  EA+ L+  M  RGC+ D+ T+  ++ GLC+ G I+
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            AL +L+K+    I  N   Y  +++  C+   ++ A +L   M  +G  P   T N L+
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LC  G   DA+  L  ++E    P   ++  L++   +  KL+ A +L DE++
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 118/227 (51%), Gaps = 4/227 (1%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K+D A  +   M  +   P++  ++ L++   K  K      + ++M+N  +  +   Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            L+NCFCR  ++  AL +L +M + G + DIVT + +L G C   +I EA+ +++++   
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   +  ++  +++      +  +A+ L+  M+ RG  P   T   ++  LCK G   D 
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI-DL 239

Query: 469 AIALFGLVEMGFKPESDS--WALLVELICRGRKLLFAFELLDELVIK 513
           A++L   +E G K E++   +  +++ +C+ + +  AF+L +++  K
Sbjct: 240 ALSLLKKMEKG-KIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 4/203 (1%)

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG   E KL +A  +F EM      P  I ++ L++   +  + D  + L ++M+  G  
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +  T++I+L   CR  ++  AL +L K+   G   +  +   +LN  C    + +A+ L
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           +  M+  G+ P   T N L+  L     A +A   +  +V  G +P+  ++  +V  +C+
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233

Query: 497 GRKLLFAFELLDELVIKESGTIQ 519
              +  A  LL ++   E G I+
Sbjct: 234 RGDIDLALSLLKKM---EKGKIE 253


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/559 (27%), Positives = 241/559 (43%), Gaps = 103/559 (18%)

Query: 54  RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           RK    I+      L++   +    LEIF  V  QKG+ H    Y   ++KL    KF+ 
Sbjct: 71  RKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKL 130

Query: 114 VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
           +D +L QM  E   F E IF+ +MKH+       + + +   +  +   +P+ K+    L
Sbjct: 131 IDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVL 190

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
            +L+  N   +A N   Y      + P    F I++K  C    ++SA  +L++M K   
Sbjct: 191 EILVTGNCPQVATNVF-YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG- 248

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEM---------------------VSK----- 267
             PN I Y TLI  L +  +  EA++L EEM                     V+K     
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDAT 308

Query: 268 ---DQIL-----PDALTYNVLIDGFCRGGKVDRAKKIM---------------------- 297
              D++L     PD +TY  L+ G CR GK++ A+KI+                      
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSG 368

Query: 298 ----------EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
                     E M N G  P++F Y  LM+G CKEG L  A+++ +EM     +P+ I Y
Sbjct: 369 QLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITY 428

Query: 348 TTLINCFCRAGRVDE-----------------------------------ALELLKEMKE 372
             L+N  C+AG ++E                                   AL LL EM  
Sbjct: 429 AILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT 488

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +GCK D+ T+N ++ GLC+  +I+EA  +   +  DG   N  +Y  +++   ++G  +K
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+ L+  ML RG      T N L+   CK G  E        ++  G   ++ S  +++ 
Sbjct: 549 ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMIN 608

Query: 493 LICRGRKLLFAFELLDELV 511
            +C+  K+  AFE L + +
Sbjct: 609 GLCKVGKVDNAFEFLRDAI 627



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 185/382 (48%), Gaps = 37/382 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+   ++T +N  + S Q+  AQ+FL  +  +   +P+   +NIL+   CK G+L  A +
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++ EM +     PN+ITY+ L++GLCK G   EA  +  EM ++   + +++ YN LI  
Sbjct: 412 LVNEMSRRGCE-PNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI-NSVIYNCLICA 469

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-------- 335
            CR  KV  A  ++  M   GC P++F Y +L+ G CK  ++ EA  +F  M        
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 336 ---KNFLLKP------------------------DTIGYTTLINCFCRAGRVDEALELLK 368
               N L+                          D I Y  LI  FC+ G +++ LEL +
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           +M   G  AD ++ NI++ GLC+ GK++ A   L      G   +  +Y  VLN  C+ G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            +++A+ L   +   G  P   T N  +   CK GM  DA +  +  +E GF P + +W 
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWN 709

Query: 489 LLVELICRGRKLLFAFELLDEL 510
           +LV  + +       F +LDEL
Sbjct: 710 VLVYTLLKQSNQENNFFVLDEL 731



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 165/336 (49%), Gaps = 19/336 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++ N +S ++G   N  TYA +++ L +    E    VL +M+      +  I+  L+
Sbjct: 409 ARDLVNEMS-RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE------KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
                C+L  +  E  H    +  E      KP L   ++ +  L + +++D A  F  +
Sbjct: 468 -----CALCRK--EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA--FRLF 518

Query: 192 SNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            N  L     N   +N LI    +RG  + A  ++ +M     +    ITY+ LI   CK
Sbjct: 519 HNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDK-ITYNGLIKAFCK 577

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G   + +EL+E+M+  D +  D ++ N++I+G C+ GKVD A + +    N G  P++ 
Sbjct: 578 VGNIEKGLELYEQMI-MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIV 636

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y +++NG CK G+++EA  +FD ++   ++PD   Y T I+  C+ G V++A       
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRG 696

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
            E G     +T+N+++  L ++   E    +L++LW
Sbjct: 697 IENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/203 (19%), Positives = 91/203 (44%), Gaps = 1/203 (0%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y   +N     GK +   ++  +MK   +      +  ++  + +AG+  +A+ LL +M+
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 372 ERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
               C+    +++++L  L      + A  +   +   G+     ++ IV+   C   E+
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           + A  LLR M   G +P+      L+  L +     +A   L  +  MG  P+  ++  +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           +  +C+  K+  A +L+D ++++
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLR 317


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 240/483 (49%), Gaps = 39/483 (8%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E +P  + +IF +  +   +   ++T+ +++D  A    F++++ VL +M  E     E 
Sbjct: 37  EHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEK 96

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            F+ + K +    L E+ + +F ++      K ++K+ ++ LN++I+      A  F  +
Sbjct: 97  CFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNH 156

Query: 192 --SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
               + + + PN   FN++IK  CK G ++ A ++ ++M  S+   P++ TY TL+DGLC
Sbjct: 157 VIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQ-PDVYTYCTLMDGLC 215

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K  R  EA+ L +EM   D   P  +T+NVLI+G C+ G + R  K+++ M   GC PN 
Sbjct: 216 KADRIDEAVSLLDEM-QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNE 274

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV--------- 360
             Y TL++G C +GKL++A  + D M +    P+ + Y T+IN   + GR          
Sbjct: 275 VTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLAL 334

Query: 361 --------------------------DEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
                                      EA++L KEM  + C+ + + ++ ++ GLCR+GK
Sbjct: 335 MEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGK 394

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
            +EAL +L ++  +    N  +Y  ++    + G   KAIE+ + M    F  +    + 
Sbjct: 395 PDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSV 454

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L+  LCK G  ++A +    ++  G KP+  ++  ++  +     +  A +L +E++ +E
Sbjct: 455 LIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQE 514

Query: 515 SGT 517
             +
Sbjct: 515 PDS 517



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 214/505 (42%), Gaps = 98/505 (19%)

Query: 78  ALEIFNTVSEQKGFN--HNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           ALE +N V   KG N   N  T+  ++  + +    +    + R M    C+     +  
Sbjct: 150 ALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCT 209

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           LM         +  + +  ++  I    PS    +  +N L +    DLA+      N  
Sbjct: 210 LMDGLCKADRIDEAVSLLDEMQ-IDGCFPSPVTFNVLINGLCKKG--DLARVAKLVDNMF 266

Query: 196 LR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           L+   PN   +N LI   C +G LE A  +L  M  S+   PN++TY T+I+GL K GR 
Sbjct: 267 LKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK-CVPNVVTYGTIINGLVKQGRA 325

Query: 255 -----------------------------------REAIELFEEMVSKDQILPDALTYNV 279
                                              +EA++LF+EM  K+  L + + Y+ 
Sbjct: 326 LDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECEL-NTIVYSA 384

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF-------------------- 319
           +IDG CR GK D A +++  M NN C PN + Y++LM GF                    
Sbjct: 385 VIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHN 444

Query: 320 ---------------CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
                          CK+GK++EA  V+ +M     KPD + Y ++IN    AG V++AL
Sbjct: 445 FTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDAL 504

Query: 365 ELLKEM--KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           +L  EM  +E   + D+VT+NI+L  LC++  I  A+ +L  +               L+
Sbjct: 505 QLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSM---------------LD 549

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATS--NELLVRLCKAGMAEDAAIALFGLVEMGF 480
             C   +L   I  LR +  +   P       + L+VRL K      A+  +  +++   
Sbjct: 550 RGCDP-DLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLL 608

Query: 481 KPESDSWALLVELICRGRKLLFAFE 505
            P+  +W  +VE +C  +K+  A +
Sbjct: 609 PPKPSTWTRVVEDLCNPKKVQAAIQ 633


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/559 (27%), Positives = 241/559 (43%), Gaps = 103/559 (18%)

Query: 54  RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           RK    I+      L++   +    LEIF  V  QKG+ H    Y   ++KL    KF+ 
Sbjct: 71  RKSRILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKL 130

Query: 114 VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
           +D +L QM  E   F E IF+ +MKH+       + + +   +  +   +P+ K+    L
Sbjct: 131 IDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVL 190

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
            +L+  N   +A N   Y      + P    F I++K  C    ++SA  +L++M K   
Sbjct: 191 EILVTGNCPQVATNVF-YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG- 248

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEM---------------------VSK----- 267
             PN I Y TLI  L +  +  EA++L EEM                     V+K     
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDAT 308

Query: 268 ---DQIL-----PDALTYNVLIDGFCRGGKVDRAKKIM---------------------- 297
              D++L     PD +TY  L+ G CR GK++ A+KI+                      
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSG 368

Query: 298 ----------EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
                     E M N G  P++F Y  LM+G CKEG L  A+++ +EM     +P+ I Y
Sbjct: 369 QLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITY 428

Query: 348 TTLINCFCRAGRVDE-----------------------------------ALELLKEMKE 372
             L+N  C+AG ++E                                   AL LL EM  
Sbjct: 429 AILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT 488

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +GCK D+ T+N ++ GLC+  +I+EA  +   +  DG   N  +Y  +++   ++G  +K
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+ L+  ML RG      T N L+   CK G  E        ++  G   ++ S  +++ 
Sbjct: 549 ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMIN 608

Query: 493 LICRGRKLLFAFELLDELV 511
            +C+  K+  AFE L + +
Sbjct: 609 GLCKVGKVDNAFEFLRDAI 627



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 184/382 (48%), Gaps = 37/382 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+   ++T +N  + S Q+  AQ+FL  +  +   +P+   +NIL+   CK G+L  A +
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++ EM +     PN+ITY+ L++GLCK G   EA  +  EM ++   + +++ YN LI  
Sbjct: 412 LVNEMSRRGCE-PNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI-NSVIYNCLICA 469

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-------- 335
            CR  KV  A  ++  M   GC P++F Y +L+ G CK  ++ EA  +F  M        
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 336 ---KNFLLKP------------------------DTIGYTTLINCFCRAGRVDEALELLK 368
               N L+                          D I Y  LI  FC+ G +++ LEL +
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           +M   G  AD ++ NI++ GLC+ GK++ A   L      G   +  +Y  VLN  C+ G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            +++A+ L   +   G  P   T N  +   CK GM  DA    +  +E GF P + +W 
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWN 709

Query: 489 LLVELICRGRKLLFAFELLDEL 510
           +LV  + +       F +LDEL
Sbjct: 710 VLVYTLLKQSNQENNFFVLDEL 731



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 130/539 (24%), Positives = 237/539 (43%), Gaps = 74/539 (13%)

Query: 28  SPLEVIKANTPKADPPVETSDTCVDARK----RSRFISHGAAISLIKCEKEPQCALEIFN 83
           S   +I  +  KA  P +     +D R        F S+   + ++     PQ A  +F 
Sbjct: 148 SIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFY 207

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
            +   KG +    T+  ++  L  + + ++  ++LR MT   C  +  ++  L+   S  
Sbjct: 208 DML-SKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK 266

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV------------------DLA 185
           +     L++  ++  +    P ++  +  ++ L + N++                  ++ 
Sbjct: 267 NQVSEALKLLEEMF-VMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMT 325

Query: 186 QNFLKYS-------NQHLRLK-----PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
             FL +        N+  ++      PN  I N LI  +   G L+ A   L E   +  
Sbjct: 326 YGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFG 385

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG----- 288
             P++ TY+ L+ GLCK G    A +L  EM S+    P+ +TY +L++G C+ G     
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEM-SRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 289 ------------------------------KVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                                         KV  A  ++  M   GC P++F Y +L+ G
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK  ++ EA  +F  M       + + Y TLI+   R G   +AL L+ +M  RGC  D
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            +T+N ++   C+ G IE+ L + E++  DG+  +  S  I++N  C+ G+++ A E LR
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICR 496
             + RGF+P   T N +L  LCK G  ++ A+ LF  +++ G +P++ ++   +   C+
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKE-ALNLFDRLQVEGVRPDAFTYNTFISWQCK 682



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 165/336 (49%), Gaps = 19/336 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++ N +S ++G   N  TYA +++ L +    E    VL +M+      +  I+  L+
Sbjct: 409 ARDLVNEMS-RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE------KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
                C+L  +  E  H    +  E      KP L   ++ +  L + +++D A  F  +
Sbjct: 468 -----CALCRK--EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA--FRLF 518

Query: 192 SNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            N  L     N   +N LI    +RG  + A  ++ +M     +    ITY+ LI   CK
Sbjct: 519 HNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDK-ITYNGLIKAFCK 577

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G   + +EL+E+M+  D +  D ++ N++I+G C+ GKVD A + +    N G  P++ 
Sbjct: 578 VGNIEKGLELYEQMI-MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIV 636

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y +++NG CK G+++EA  +FD ++   ++PD   Y T I+  C+ G V++A       
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRG 696

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
            E G     +T+N+++  L ++   E    +L++LW
Sbjct: 697 IENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/203 (19%), Positives = 91/203 (44%), Gaps = 1/203 (0%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y   +N     GK +   ++  +MK   +      +  ++  + +AG+  +A+ LL +M+
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 372 ERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
               C+    +++++L  L      + A  +   +   G+     ++ IV+   C   E+
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           + A  LLR M   G +P+      L+  L +     +A   L  +  MG  P+  ++  +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           +  +C+  K+  A +L+D ++++
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLR 317


>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Glycine max]
          Length = 449

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 226/446 (50%), Gaps = 50/446 (11%)

Query: 54  RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           RKR  F++       +K  ++P+ AL +F+   EQ GF H   +YA +L KLAR + F+A
Sbjct: 40  RKRIPFVTE------VKTVEDPEEALSLFHRYKEQ-GFRHYYPSYAALLYKLARSRMFDA 92

Query: 114 VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
           V+ +L  M     +  E +F+ L +H+      E+ +E+F+++ P      ++++ +  L
Sbjct: 93  VETILAHMKDTEMQCRESVFIALFQHYGP----EKAVELFNRM-PQFNCTRTIQSFNALL 147

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
           N+LI++++ D A +    S + +  +PNT  FNI++K    +G    A EV  EM + ++
Sbjct: 148 NVLIDNDRFDEANDIFGKSYE-MGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRV 206

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
             P+++TY++LI  LC+ G   +A+ L E+M  K +   + +TY +L++G C   K + A
Sbjct: 207 Q-PSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGK-HANEVTYALLMEGLCSVEKTEEA 264

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           KK+M  M   GC     N+  LMN   K GK++EAK +  EMK   LKPD + Y  LIN 
Sbjct: 265 KKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINY 324

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+ G+  EA ++L EM+  GC  +  T+ +++ GLC                       
Sbjct: 325 LCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLC----------------------- 361

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
                       Q G+ E A+ +L  ML     P   T N ++V L K+G  + +   L 
Sbjct: 362 ------------QIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLE 409

Query: 474 GLVEMGFKPESDSWALLVELICRGRK 499
            + +   + + +SW  +++  C   K
Sbjct: 410 EMEKRKLEFDLESWETIIKSACSENK 435



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 173/379 (45%), Gaps = 15/379 (3%)

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSL-KAISTCLNLLIESNQVDLAQNFLKYSN 193
           N + H++N     R +   HK  P  R  P   K I     +    +  +    F +Y  
Sbjct: 12  NPLIHYAN----NRSIPHTHKPRPHERPTPKFRKRIPFVTEVKTVEDPEEALSLFHRYKE 67

Query: 194 QHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           Q  R   P+   +  L+    +    ++   +L  MK ++M         ++   L ++ 
Sbjct: 68  QGFRHYYPS---YAALLYKLARSRMFDAVETILAHMKDTEMQ-----CRESVFIALFQHY 119

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              +A+ELF  M  +        ++N L++      + D A  I       G  PN   +
Sbjct: 120 GPEKAVELFNRM-PQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTF 178

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             ++ G   +G+  +A EVFDEM    ++P  + Y +LI   CR G +D+A+ LL++M +
Sbjct: 179 NIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQ 238

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G  A+ VT+ +++ GLC   K EEA  ++  + Y G      ++ +++N   ++G++E+
Sbjct: 239 KGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEE 298

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  LL  M  R   P   T N L+  LCK G A +A   L  +   G  P + ++ ++V+
Sbjct: 299 AKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVD 358

Query: 493 LICRGRKLLFAFELLDELV 511
            +C+      A  +L+ ++
Sbjct: 359 GLCQIGDFEVALSVLNAML 377



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 112/222 (50%)

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           ++A ++   M    C   + ++  L+N      +  EA ++F +      +P+T+ +  +
Sbjct: 122 EKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTFNIM 181

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +      G   +A E+  EM ++  +  +VT+N ++G LCR+G +++A+ +LE +   G 
Sbjct: 182 VKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGK 241

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           + N+ +Y +++   C   + E+A +L+  M  RG          L+  L K G  E+A  
Sbjct: 242 HANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKS 301

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
            L  + +   KP+  ++ +L+  +C+  K + A+++L E+ I
Sbjct: 302 LLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQI 343


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 193/363 (53%), Gaps = 7/363 (1%)

Query: 135 NLMKHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           N++ HF  C L  R+ E  H +    +    P + + ST +N      ++D     ++  
Sbjct: 250 NIVIHFV-CQLG-RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            +   LKPN+ I+  +I   C+   L  A E   EM + Q   P+ + Y+TLIDG CK G
Sbjct: 308 KRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVYTTLIDGFCKRG 365

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
             R A + F EM S+D I PD LTY  +I GFC+ G +  A K+   M   G  P+   +
Sbjct: 366 DIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L+NG+CK G +++A  V + M      P+ + YTTLI+  C+ G +D A ELL EM +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + +I T+N I+ GLC+ G IEEA+ ++ +    G+  +  +Y  +++  C+ GE++K
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A E+L+ ML +G  P   T N L+   C  GM ED    L  ++  G  P + ++  LV+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604

Query: 493 LIC 495
             C
Sbjct: 605 QYC 607



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 174/311 (55%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T ++  LI   CKRG + +A +   EM    ++ P+++TY+ +I G C+ G   EA +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDMVEAGK 407

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM  K  + PD++T+  LI+G+C+ G +  A ++   M   GC+PNV  YTTL++G 
Sbjct: 408 LFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG L  A E+  EM    L+P+   Y +++N  C++G ++EA++L+ E +  G  AD 
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+  ++   C+ G++++A  +L+++   G+     ++ +++N  C  G LE   +LL  
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML +G  P+  T N L+ + C     + A      +   G  P+  ++  LV+  C+ R 
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646

Query: 500 LLFAFELLDEL 510
           +  A+ L  E+
Sbjct: 647 MKEAWFLFQEM 657



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 216/427 (50%), Gaps = 10/427 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN-CSL 145
           E KG+  +  +Y+T+++   R+ + + V  ++  M  +  K +  I+ +++      C L
Sbjct: 273 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332

Query: 146 HERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
            E   E F ++    R+   P     +T ++   +   +  A  F  Y      + P+  
Sbjct: 333 AE-AEEAFSEM---IRQGILPDTVVYTTLIDGFCKRGDIRAASKFF-YEMHSRDITPDVL 387

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +  +I   C+ G +  A ++  EM    +  P+ +T++ LI+G CK G  ++A  +   
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMKDAFRVHNH 446

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ +    P+ +TY  LIDG C+ G +D A +++  M   G  PN+F Y +++NG CK G
Sbjct: 447 MI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++EA ++  E +   L  DT+ YTTL++ +C++G +D+A E+LKEM  +G +  IVTFN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ G C  G +E+   +L  +   GI  N  ++  ++   C +  L+ A  + + M  R
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T   L+   CKA   ++A      +   GF     ++++L++   + +K L A
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685

Query: 504 FELLDEL 510
            E+ D++
Sbjct: 686 REVFDQM 692



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 135/245 (55%), Gaps = 2/245 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  LI   CK G L+SA E+L EM K  +  PN+ TY+++++GLCK+G   EA++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVK 512

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  E  +   +  D +TY  L+D +C+ G++D+A++I++ M   G  P +  +  LMNGF
Sbjct: 513 LVGEFEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C  G L++ +++ + M    + P+   + +L+  +C    +  A  + K+M  RG   D 
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+  ++ G C+   ++EA  + +++   G  ++ ++Y +++    ++ +  +A E+   
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691

Query: 440 MLCRG 444
           M   G
Sbjct: 692 MRREG 696



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 215/455 (47%), Gaps = 32/455 (7%)

Query: 82  FNTVSEQKGFNHNNATYATILD-----KLARYKKFEAVDAVLRQMTYETCKFH-EGIFLN 135
           F+T+++ + F   +   A++ D     ++    K    + + R +    CKF  + +   
Sbjct: 34  FSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWV 93

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           LMK    C  +  VL+ F      +R   +L+++   ++L + S  + +AQ+ +    + 
Sbjct: 94  LMK--IKCD-YRLVLDFFDWAR--SRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWER 148

Query: 196 LRLKPNTCI---FNILIKHHCKRGTLESAFEVLKE-------MKKSQMSYPNLITYSTLI 245
            +L         F++L+  +   G+    F+V  +       +++++  +  ++ Y  ++
Sbjct: 149 PKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVL 208

Query: 246 D---------GLCKN-GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
                      L K+  +   AI +F E   +  +  +  +YN++I   C+ G++  A  
Sbjct: 209 SVDSCNVYLTRLSKDCYKTATAIIVFREF-PEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M+  G  P+V +Y+T++NG+C+ G+L +  ++ + MK   LKP++  Y ++I   C
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R  ++ EA E   EM  +G   D V +  ++ G C+ G I  A     ++    I  +  
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  CQ G++ +A +L   M C+G  P   T  EL+   CKAG  +DA      +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           ++ G  P   ++  L++ +C+   L  A ELL E+
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 138/251 (54%), Gaps = 3/251 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T ++ L +   +D A   L +    + L+PN   +N ++   CK G +E A +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELL-HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++ E + + ++  + +TY+TL+D  CK+G   +A E+ +EM+ K  + P  +T+NVL++G
Sbjct: 513 LVGEFEAAGLN-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNG 570

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC  G ++  +K++ +M   G  PN   + +L+  +C    L+ A  ++ +M +  + PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y  L+   C+A  + EA  L +EMK +G    + T+++++ G  +  K  EA  + +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690

Query: 404 KLWYDGIYLNK 414
           ++  +G+  +K
Sbjct: 691 QMRREGLAADK 701



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 4/295 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   ++ T+  +++   +    +    V   M    C  +   +  L+         + 
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
             E+ H++  I  + P++   ++ +N L +S  ++ A   +    +   L  +T  +  L
Sbjct: 475 ANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKLVG-EFEAAGLNADTVTYTTL 532

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +  +CK G ++ A E+LKEM    +  P ++T++ L++G C +G   +  +L   M++K 
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQ-PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            I P+A T+N L+  +C    +  A  I + M + G  P+   Y  L+ G CK   ++EA
Sbjct: 592 -IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
             +F EMK          Y+ LI  F +  +  EA E+  +M+  G  AD   F+
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 4/285 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G + N  TY T++D L +    ++ + +L +M     + +   + +++         E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             +++  +         ++   +T ++   +S ++D AQ  LK       L+P    FN+
Sbjct: 509 EAVKLVGEFEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILK-EMLGKGLQPTIVTFNV 566

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G LE   ++L  M    ++ PN  T+++L+   C     + A  ++++M S+
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIA-PNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD  TY  L+ G C+   +  A  + + MK  G + +V  Y+ L+ GF K  K  E
Sbjct: 626 G-VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           A+EVFD+M+   L  D   +    +   +  R D  ++ + E+ E
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 1/242 (0%)

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE-GKLQEAKEV 331
           D   ++V        G +  A+++ E M N G   +V +    +    K+  K   A  V
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F E     +  +   Y  +I+  C+ GR+ EA  LL  M+ +G   D+++++ ++ G CR
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G++++   ++E +   G+  N   Y  ++   C+  +L +A E    M+ +G LP    
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L+   CK G    A+   + +      P+  ++  ++   C+   ++ A +L  E+ 
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413

Query: 512 IK 513
            K
Sbjct: 414 CK 415


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 193/356 (54%), Gaps = 5/356 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P L      +N L +    DLA N L    Q  +L+P   I+N +I   CK   ++ A 
Sbjct: 13  QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNTIIDGLCKYKHMDDAL 71

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + KEM+   +  PN++TYS+LI  LC  GR+ +A  L  +M+ + +I PD  T++ LID
Sbjct: 72  NLFKEMETKGIR-PNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALID 129

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            F + GK+  A+K+ + M     +P++  Y++L+NGFC   +L EAK++F+ M +    P
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + Y TLI  FC+  RV+E +E+ +EM +RG   + VT+NI++ GL + G  + A  + 
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 249

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +++  DG+  N  +Y  +L+  C+ G+LEKA+ +   +      P   T N ++  +CKA
Sbjct: 250 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 309

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           G  ED       L   G KP+  ++  ++   CR      A  L  E+  KE GT+
Sbjct: 310 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM--KEDGTL 363



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 202/398 (50%), Gaps = 15/398 (3%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
            +++G  ++ +    +   A  + N + EQ         Y TI+D L +YK  +    + 
Sbjct: 16  LVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 74

Query: 119 RQMTYETCKFHEGIFLNLMK---HFSNCSLHERVL-EMFHKIHPITREKPSLKAISTCLN 174
           ++M  +  + +   + +L+    ++   S   R+L +M  +     +  P +   S  ++
Sbjct: 75  KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-----KINPDVFTFSALID 129

Query: 175 LLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
             ++  ++  A+    Y     R + P+   ++ LI   C    L+ A ++  E   S+ 
Sbjct: 130 AFVKEGKLVEAEKL--YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF-EFMVSKH 186

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
            +P+++TY+TLI G CK  R  E +E+F EM S+  ++ + +TYN+LI G  + G  D A
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMA 245

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           ++I + M ++G  PN+  Y TL++G CK GKL++A  VF+ ++   ++P    Y  +I  
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+AG+V++  +L   +  +G K D+V +N ++ G CR+G  EEA  + +++  DG   N
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 365

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
              Y  ++    + G+ E + EL++ M   GF    +T
Sbjct: 366 SGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 202/412 (49%), Gaps = 8/412 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL--NLMKHFSNCSLH 146
           KG   +  TY  +++ L +    +    +L +M  E  K   G+ +   ++         
Sbjct: 10  KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM--EQGKLEPGVLIYNTIIDGLCKYKHM 67

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +  L +F ++      +P++   S+ ++ L    +   A   L    +  ++ P+   F+
Sbjct: 68  DDALNLFKEMET-KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFS 125

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI    K G L  A ++  EM K  +  P+++TYS+LI+G C + R  EA ++FE MVS
Sbjct: 126 ALIDAFVKEGKLVEAEKLYDEMVKRSID-PSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K    PD +TYN LI GFC+  +V+   ++   M   G   N   Y  L+ G  + G   
Sbjct: 185 K-HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+E+F EM +  + P+ + Y TL++  C+ G++++A+ + + ++    +  I T+NI++
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G+C+ GK+E+   +   L   G+  +  +Y  +++  C+KG  E+A  L + M   G L
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           P+    N L+    + G  E +A  +  +   GF  ++ +  L+  ++  GR
Sbjct: 364 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 415



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 110/215 (51%)

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M   GC P++  Y  ++NG CK G    A  + ++M+   L+P  + Y T+I+  C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +   +D+AL L KEM+ +G + ++VT++ ++  LC  G+  +A  +L  +    I  +  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  +++   ++G+L +A +L   M+ R   P   T + L+   C     ++A      +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           V     P+  ++  L++  C+ +++    E+  E+
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 217



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 78/148 (52%)

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           + L+  M  +GC+ D+VT+ +++ GLC+ G  + A  +L K+    +      Y  +++ 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+   ++ A+ L + M  +G  P+  T + L+  LC  G   DA+  L  ++E    P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             +++ L++   +  KL+ A +L DE+V
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMV 148


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 226/426 (53%), Gaps = 4/426 (0%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           +IF++  +   F   ++T+ ++++  A    F +++ VL +M  E   F E  F  + K 
Sbjct: 57  KIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKA 116

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY--SNQHLR 197
           +    L  + +E+F+++      KP++K+ ++ LN++I++   D A  F  +    + + 
Sbjct: 117 YGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMN 176

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   FN++IK  CK G +++A E+ +EM   +   P+  TY TL+DGLCK  R  EA
Sbjct: 177 ILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRK-CVPDAYTYCTLMDGLCKVDRIDEA 235

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L +EM   +   P   T+NVLI+G C+ G   R  K+++ M   GC PN   Y TL++
Sbjct: 236 VSLLDEM-QIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIH 294

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C +GKL +A  + D M +    P+ + Y T+IN   + GR  +   +L  M+ERG   
Sbjct: 295 GLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIV 354

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +   +++++ GL +EGK EEA+ + ++    G  LN   Y  +++  C+  + ++A+++L
Sbjct: 355 NEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKIL 414

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G  P+  T + L+    + G +  A      + ++        +++L+  +C+ 
Sbjct: 415 SEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKD 474

Query: 498 RKLLFA 503
            K++ A
Sbjct: 475 GKVMEA 480



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 213/450 (47%), Gaps = 36/450 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F  +  +K    +  TY T++D L +  + +   ++L +M  E C      F  L+
Sbjct: 200 AIELFREMPVRKCV-PDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLI 258

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                     RV ++   +  +    P+    +T ++ L    ++D A + L       +
Sbjct: 259 NGLCKKGDFTRVTKLVDNMF-LKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSS-K 316

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN   +  +I    K+G       VL  M++      N   YS L+ GL K G+  EA
Sbjct: 317 CVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIV-NEYVYSVLVSGLFKEGKSEEA 375

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF+E + K   L + + Y+ L+DG CR  K D A KI+  M + GC PN F +++LM 
Sbjct: 376 MRLFKESMDKGCKL-NTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMK 434

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF + G   +A EV+ +M       + + Y+ LI+  C+ G+V EA+ +  +M   GC+ 
Sbjct: 435 GFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRP 494

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS------YRIVLNFSCQKGELE 431
           D+V ++ ++ GLC  G +EEAL    KL+ + + L   S      Y I+ N  C++  + 
Sbjct: 495 DVVAYSSMIQGLCDAGSVEEAL----KLYNEMLCLEPDSQPDVITYNILFNALCKQSSIS 550

Query: 432 KAIELLRLMLCRGFLPHYATSN---------------------ELLVRLCKAGMAEDAAI 470
           +A++LL  ML RG  P   T N                     EL+VRL K      A+ 
Sbjct: 551 RAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASK 610

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKL 500
            +  +++    P++ +WA +V  +C+ +K+
Sbjct: 611 IVEVMLQKFLSPKASTWARVVHELCQPKKI 640



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 161/311 (51%), Gaps = 2/311 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F ++ K + K      A E+   M       P + +++++++ + + G    A+E +  +
Sbjct: 110 FFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHV 169

Query: 265 V-SKD-QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           V +KD  ILP+ L++N++I   C+ G VD A ++   M    C P+ + Y TLM+G CK 
Sbjct: 170 VGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKV 229

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            ++ EA  + DEM+     P    +  LIN  C+ G      +L+  M  +GC  + VT+
Sbjct: 230 DRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTY 289

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++ GLC +GK+++AL +L+++       N+ +Y  ++N   ++G       +L LM  
Sbjct: 290 NTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEE 349

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           RG++ +    + L+  L K G +E+A       ++ G K  +  ++ LV+ +CR RK   
Sbjct: 350 RGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDE 409

Query: 503 AFELLDELVIK 513
           A ++L E+  K
Sbjct: 410 AMKILSEMTDK 420


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 233/434 (53%), Gaps = 4/434 (0%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           EIF + ++   +   + ++ ++++  A    F +++ VL QM  E   F E  F+ + K 
Sbjct: 46  EIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKA 105

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY--SNQHLR 197
           +    L E+ +++FH++    + K ++K+ ++ LN++++    + A  F  +  +++ L 
Sbjct: 106 YGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLN 165

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   FN++IK  C+ G ++ A EV +E+     + P+  TYSTL+ GLCK  R  EA
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCA-PDNYTYSTLMHGLCKEERIDEA 224

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L +EM   +   P+ + +NVLI   C+ G + RA K+++ M   GC PN   Y  L++
Sbjct: 225 VSLLDEM-QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVH 283

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C +GKL++A  + ++M +    P+ + + TLIN F   GR  +   +L  ++ RG + 
Sbjct: 284 GLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRG 343

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +   ++ ++ GLC+EGK  +A+ + +++   G   N   Y  +++  C++G+L++A   L
Sbjct: 344 NEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFL 403

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G+LP+  T + L+    +AG +  A +    +           +++L+  +C+ 
Sbjct: 404 SEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKD 463

Query: 498 RKLLFAFELLDELV 511
            K + A  +  +++
Sbjct: 464 GKFMEALMVWKQML 477



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 224/486 (46%), Gaps = 70/486 (14%)

Query: 78  ALEIFNTVSEQKGFN-HNNA-TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           ALE +N V   K  N H NA T+  ++  + R    +    V R++    C      +  
Sbjct: 151 ALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYST 210

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           LM         ER+ E    +  +  E   P+L A +  ++ L +   +  A   +   N
Sbjct: 211 LMHGLCK---EERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLV--DN 265

Query: 194 QHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT------------ 240
             L+   PN   +N L+   C +G LE A  +L +M  S    PN +T            
Sbjct: 266 MFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMV-SNKCVPNDVTFGTLINGFVMQG 324

Query: 241 -----------------------YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
                                  YS+LI GLCK G+F +A+EL++EMV K    P+ + Y
Sbjct: 325 RASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKG-CGPNTIVY 383

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           + LIDG CR GK+D A+  +  MKN G  PN F Y++LM G+ + G   +A  V+ EM N
Sbjct: 384 SALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMAN 443

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
                + + Y+ LIN  C+ G+  EAL + K+M  RG K D+V ++ ++ G C    +E+
Sbjct: 444 NNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQ 503

Query: 398 ALGMLEKLWYDG--IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN-- 453
            L +  ++   G  +  +  +Y I+LN  C +  + +AI++L +ML +G  P + T +  
Sbjct: 504 GLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIF 563

Query: 454 -------------------ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
                              EL+VRL K      A+  +  ++     P++ +WA++V+ +
Sbjct: 564 LKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQV 623

Query: 495 CRGRKL 500
           C+ + +
Sbjct: 624 CKPKNV 629



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 8/317 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSY--PNLITYSTLIDGLCKNGRFREAIELFE 262
           F  LI+ H       S  EVL +MK+ +  +   N I    +     K     +A++LF 
Sbjct: 64  FYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIV---MFKAYGKAHLPEKAVDLFH 120

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM---KNNGCNPNVFNYTTLMNGF 319
            M  + Q      ++N +++   + G  +RA +    +   K+   +PN   +  ++   
Sbjct: 121 RMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAM 180

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G + +A EVF E+      PD   Y+TL++  C+  R+DEA+ LL EM+  G   ++
Sbjct: 181 CRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNL 240

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V FN+++  LC++G +  A  +++ ++  G   N+ +Y  +++  C KG+LEKA+ LL  
Sbjct: 241 VAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQ 300

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+    +P+  T   L+      G A D    L  L   G +     ++ L+  +C+  K
Sbjct: 301 MVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGK 360

Query: 500 LLFAFELLDELVIKESG 516
              A EL  E+V K  G
Sbjct: 361 FNQAMELWKEMVGKGCG 377


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 238/478 (49%), Gaps = 34/478 (7%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +T +D               L KC +  + AL +++ ++   GF     TY+T+
Sbjct: 63  PTVVTYNTMIDG--------------LCKCGR-IENALTLYDDMAIHFGFRPTVVTYSTL 107

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           +D L R  + +    +L +M    C  +   +  L+          R  E F  +  +  
Sbjct: 108 IDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLG---QGRSKEAFSLLEQMAA 164

Query: 162 E--KPSLKAISTCLNLLIESNQVDLA-----QNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
               P L      +  L +  +++ A     + F+  S     L P+   FN ++   CK
Sbjct: 165 NGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESG----LSPDVITFNSVLDGLCK 220

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
              +  A  V K   + +   PN++TYSTLIDGL K  +  EA++L  +MV       + 
Sbjct: 221 EQRILDAHNVFKRALE-RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL-GCRANT 278

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +TY+ ++DG  + G+++ A  ++  M++ GC P+   Y TL++GF K  +L+EA  +  E
Sbjct: 279 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M      P  + YTTL +  CR+GR DEA+E+L  M  RGC  + +T++ I+ GLC+ G+
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398

Query: 395 IEEALGMLEKLWYDGIYLNKA-SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           + EALG  EK+  D +      +Y  +++  C+ G++++A E L  M+  G +P   T +
Sbjct: 399 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFS 458

Query: 454 ELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            L+  LC AG   D  + LF G+ E G  P+  ++A LV+ +CR  ++  AF+L  ++
Sbjct: 459 ILINGLCDAGRI-DTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQM 515



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 221/446 (49%), Gaps = 25/446 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F  + + K    +  TY  ++D L + ++ +    +  +   + C      +  ++
Sbjct: 14  AITLFKQMVD-KAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMI 72

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                C   E  L ++  +      +P++   ST ++ L   ++VD     L+       
Sbjct: 73  DGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGR-G 131

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN   +N L+     +G  + AF +L++M  +    P LIT+  +I GLCK G    A
Sbjct: 132 CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCP-PELITFGLIIKGLCKEGEIEAA 190

Query: 258 IELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
             + +EM   +  L PD +T+N ++DG C+  ++  A  + +     GC PNV  Y+TL+
Sbjct: 191 FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 250

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G  K  K+ EA ++  +M     + +T+ Y+T+++   + GR+++A+ +L++M++ GC 
Sbjct: 251 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 310

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D VT+N ++ G  +  ++ EA+G+L ++   G + +  +Y  + +  C+ G  ++A+E+
Sbjct: 311 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 370

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAG-----------MAEDAAIALFGLVEMGFKPESD 485
           L  M  RG  P+  T + ++  LCKAG           MA D  +A          P   
Sbjct: 371 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA----------PHVI 420

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           +++ L++ +C+  K+  A+E L+ ++
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMI 446



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 169/307 (55%), Gaps = 4/307 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++   ST ++ L +  ++D A   L    + L  + NT  ++ ++    K G +E A 
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE-LGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            VL++M+ +    P+ +TY+TLIDG  K  R REA+ L  EM+      P  +TY  L  
Sbjct: 299 VVLRQMRDAG-CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA-GFHPSVVTYTTLCH 356

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLK 341
           G CR G+ D A +I+++M   GC PN   Y+++++G CK G++ EA   F++M ++ ++ 
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  I Y+ LI+  C+AG++DEA E L+ M   G   D+VTF+I++ GLC  G+I+  L +
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 476

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
              +   G   +  +Y  +++  C+   +++A +L + M   G  P  +T   ++  L +
Sbjct: 477 FRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLE 536

Query: 462 AGMAEDA 468
               EDA
Sbjct: 537 VNRDEDA 543



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 197/366 (53%), Gaps = 6/366 (1%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTV-SEQKGFNHNNATYATILDKLARYKKFEAVDAV 117
            I+ G  I  +  E E + A  + + +   + G + +  T+ ++LD L + ++      V
Sbjct: 171 LITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 230

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
            ++     C+ +   +  L+   S  +  +  L++  K+  +     ++   ST ++ L+
Sbjct: 231 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV-TYSTVVDGLL 289

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +  +++ A   L+       L P+   +N LI    KR  L  A  +L+EM ++   +P+
Sbjct: 290 KVGRMEDAVVVLRQMRDAGCL-PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF-HPS 347

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++TY+TL  GLC++GRF EA+E+ + M ++    P+A+TY+ ++DG C+ G+V  A    
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAAR-GCAPNAITYSSIVDGLCKAGRVTEALGYF 406

Query: 298 EFM-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           E M ++    P+V  Y+ L++G CK GK+ EA E  + M      PD + ++ LIN  C 
Sbjct: 407 EKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCD 466

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           AGR+D  LEL + M ERGC  D+VT+  ++  LCR  +++EA  + +++  DG+  ++++
Sbjct: 467 AGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRST 526

Query: 417 YRIVLN 422
            R +++
Sbjct: 527 RRTMIH 532



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 196/353 (55%), Gaps = 4/353 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T ++ L +  +++ A         H   +P    ++ LI   C+   ++   +
Sbjct: 63  PTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCK 122

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L+EM     + PN +TY+TL++ L   GR +EA  L E+M + +   P+ +T+ ++I G
Sbjct: 123 LLEEMAGRGCA-PNAVTYNTLVNALLGQGRSKEAFSLLEQMAA-NGCPPELITFGLIIKG 180

Query: 284 FCRGGKVDRAKKIME--FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            C+ G+++ A ++++  FM  +G +P+V  + ++++G CKE ++ +A  VF        +
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ + Y+TLI+   +  ++DEAL+LL +M E GC+A+ VT++ ++ GL + G++E+A+ +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L ++   G   +  +Y  +++   ++  L +A+ LLR ML  GF P   T   L   LC+
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +G  ++A   L  +   G  P + +++ +V+ +C+  ++  A    +++   E
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 413



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 155/271 (57%), Gaps = 4/271 (1%)

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           +IDGLCK+ +  +AI LF++MV K  I PD +TY  LIDG  +  +V  A  + E  +  
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDK-AIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 59

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK-NFLLKPDTIGYTTLINCFCRAGRVDE 362
           GC+P V  Y T+++G CK G+++ A  ++D+M  +F  +P  + Y+TLI+  CR   VD+
Sbjct: 60  GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDK 119

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
             +LL+EM  RGC  + VT+N ++  L  +G+ +EA  +LE++  +G      ++ +++ 
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179

Query: 423 FSCQKGELEKAIELLR--LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             C++GE+E A  ++    M+  G  P   T N +L  LCK     DA       +E G 
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELV 511
           +P   +++ L++ + +  K+  A +LL ++V
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 173/380 (45%), Gaps = 77/380 (20%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK   ++ A  + K+M    + YP+++TY  LIDGL K  R +EA +LFEE  +K
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAI-YPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 59

Query: 268 ------------------------------DQIL-----PDALTYNVLIDGFCRGGKVDR 292
                                         D  +     P  +TY+ LIDG CR  +VD+
Sbjct: 60  GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDK 119

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMN----------------------------------- 317
             K++E M   GC PN   Y TL+N                                   
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179

Query: 318 GFCKEGKLQEAKEVFDEMKNFL----LKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           G CKEG+++ A  V DEM  F+    L PD I + ++++  C+  R+ +A  + K   ER
Sbjct: 180 GLCKEGEIEAAFRVVDEM--FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC+ ++VT++ ++ GL +  K++EAL +L K+   G   N  +Y  V++   + G +E A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           + +LR M   G LP   T N L+    K     +A   L  ++E GF P   ++  L   
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357

Query: 494 ICRGRKLLFAFELLDELVIK 513
           +CR  +   A E+LD +  +
Sbjct: 358 LCRSGRFDEAVEILDYMAAR 377



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 152/311 (48%), Gaps = 3/311 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   N  TY+T++D L++  K +    +L +M    C+ +   +  ++         E
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             + +  ++       P     +T ++   +  ++  A   L+         P+   +  
Sbjct: 296 DAVVVLRQMRD-AGCLPDAVTYNTLIDGFFKRQRLREAVGLLR-EMLEAGFHPSVVTYTT 353

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L    C+ G  + A E+L  M  ++   PN ITYS+++DGLCK GR  EA+  FE+M   
Sbjct: 354 LCHGLCRSGRFDEAVEILDYMA-ARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARD 412

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + P  + Y+ LIDG C+ GK+D A + +E M   G  P+V  ++ L+NG C  G++  
Sbjct: 413 EVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDT 472

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
             E+F  M      PD + Y TL++  CRA RVDEA +L ++M+  G   D  T   ++ 
Sbjct: 473 GLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIH 532

Query: 388 GLCREGKIEEA 398
           GL    + E+A
Sbjct: 533 GLLEVNRDEDA 543



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 7/282 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY+T++D L +  + E    VLRQM    C      +  L+  F      +R+
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK---RQRL 329

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    +  +      PS+   +T  + L  S + D A   L Y        PN   ++ 
Sbjct: 330 REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR-GCAPNAITYSS 388

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++   CK G +  A    ++M + ++  P++I YS LIDGLCK G+  EA E  E M+  
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I PD +T+++LI+G C  G++D   ++   M   GC P++  Y TL++  C+  ++ E
Sbjct: 449 GRI-PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDE 507

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           A ++F +M++  L PD     T+I+      R ++A  +  E
Sbjct: 508 AFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 114/203 (56%), Gaps = 1/203 (0%)

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G CK  K+ +A  +F +M +  + PD + Y  LI+   +  RV EA +L +E + +G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKA 433
           C   +VT+N ++ GLC+ G+IE AL + + +  + G      +Y  +++  C+  E++K 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            +LL  M  RG  P+  T N L+  L   G +++A   L  +   G  PE  ++ L+++ 
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 494 ICRGRKLLFAFELLDELVIKESG 516
           +C+  ++  AF ++DE+ + ESG
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESG 203


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 237/494 (47%), Gaps = 79/494 (15%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY +++  L + K+ E     L +M  +   FH  ++       + C +  R+ E    
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSK--GFHPDVYTYTAVIHALC-VENRLHEARKF 68

Query: 156 IHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +  +      P++   +  ++ L +  +VD A   L  S    +  P    +N LI   C
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALL--SKMRKKCVPTAVTYNSLISGLC 126

Query: 214 KRGTLESAFEVLKEM----------------------KKSQMSY------------PNLI 239
           K      A+++L+EM                      KKS  +             P+++
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TYS LIDGLCK GR +EAI+LF  M+     +P+ +TYN LI GFCR GK+D A  ++E 
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G +P+V  YTTLMNGFCK  +L +A ++ ++M    L PD + +T+L++  CR  R
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG-MLEKL-----------WY 407
           + +A+ +L EM+ + C   + T+N IL G CR  ++EEA   MLE++             
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMI 366

Query: 408 DGI-YLNKAS--------------------YRIVLNFSCQKGELEKAIELLRLMLCR-GF 445
            G+  +N++S                    Y  V++  C++ ++++A  + R ML   G 
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           LP+  T + L+  LC AGM + A     G +E G  P   ++ LL++   +  +   A E
Sbjct: 427 LPNSITYSTLVTGLCNAGMLDRAR----GYIEKGCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 506 LLDELVIKESGTIQ 519
           LLD++V +  G +Q
Sbjct: 483 LLDDMVQRGFGVVQ 496



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 154/278 (55%), Gaps = 3/278 (1%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           + +TY++LI GLCK  R  +A+    +MVSK    PD  TY  +I   C   ++  A+K 
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKG-FHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +E M N    PNV  YT L++G CK G++ EA  +  +M+   + P  + Y +LI+  C+
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCK 127

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           A R  EA +LL+EM   GC  DI T+  ++ G C+  K ++AL + E+L   G   +  +
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGF-LPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           Y  +++  C++G L++AI+L   M+  G  +P+  T N L+   C+ G  ++A   L  +
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            E G  P+  ++  L+   C+  +L  A++LL+++  K
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 146/256 (57%), Gaps = 6/256 (2%)

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           MV+ +    D +TY  LI G C+  ++++A   +  M + G +P+V+ YT +++  C E 
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +L EA++  +EM N  L P+ + YT LI+  C+ GRVDEA+ LL +M+++ C    VT+N
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYN 119

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC+  +  EA  +LE++ Y G   +  +Y  ++   C+  + + A+ +   ++ R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGF-KPESDSWALLVELICRGRKLL 501
           GF P   T + L+  LCK G  ++ AI LFG +++ G   P + ++  L+   CR  K+ 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKE-AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238

Query: 502 FAFELLDELVIKESGT 517
            A  LL+ +   E+G+
Sbjct: 239 EAMNLLERMA--ETGS 252



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 160/338 (47%), Gaps = 46/338 (13%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEG 131
           K+   AL +F  +   +GF  +  TY+ ++D L +  +  EA+D   R +   +C  +  
Sbjct: 164 KKSDDALRVFEQLV-ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            + +L+  F      +  + +  ++   T   P +   +T +N   +  ++D A + L  
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAE-TGSSPDVVTYTTLMNGFCKLARLDDAYDLL-- 279

Query: 192 SNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
            NQ  R  L P+   F  L+   C+   L  A  +L EM++   S P + TY+T++DG C
Sbjct: 280 -NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS-PTVYTYNTILDGYC 337

Query: 250 KNGRFREAIE-LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           +  +  EA + + EEM       P+ +++N++I G C+  +   A +++E  +   CNP+
Sbjct: 338 RANQLEEARKFMLEEM----DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVD------ 361
           V  YTT+++G C+E K+ EA  V+ +M +     P++I Y+TL+   C AG +D      
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI 453

Query: 362 -------------------------EALELLKEMKERG 374
                                    +A ELL +M +RG
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 176/298 (59%), Gaps = 2/298 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+  I+N +I   CK G +  A ++L+ M+K  + +P+ + Y+T+I G CK G    A
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGV-FPDNVVYTTVISGFCKLGNVSAA 366

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF+EM  K +I+PD +TY  +I G C+ GK+  A+++   M   G  P+   YT L++
Sbjct: 367 CKLFDEMRRK-KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK G+++EA  V ++M    L P+ + YT L +  C+ G +D A ELL EM  +G + 
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP 485

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ T+N I+ GLC+ G IE+ + ++E++   G Y +  +Y  +++  C+ GE+ KA ELL
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           R+ML +   P   T N L+   C +GM ED    +  ++E G  P + ++  L++  C
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYC 603



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 170/314 (54%), Gaps = 2/314 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ P+   +  +I   CK G +  A E+  EM    +  P+ +TY+ LIDG CK G  +E
Sbjct: 377 KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLE-PDEVTYTALIDGYCKAGEMKE 435

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +  +MV K  + P+ +TY  L DG C+ G++D A +++  M   G  PNV+ Y T++
Sbjct: 436 AFSVHNQMVQKG-LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG CK G +++  ++ +EM      PDTI YTTL++ +C+ G + +A ELL+ M  +  +
Sbjct: 495 NGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQ 554

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             +VTFN+++ G C  G +E+   ++E +   GI  N  ++  ++   C K  +    E+
Sbjct: 555 PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEI 614

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + M  RG +P   T N L+   CKA   ++A      +VE G+   + ++  L+    +
Sbjct: 615 YKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYK 674

Query: 497 GRKLLFAFELLDEL 510
            +K + A +L +E+
Sbjct: 675 RKKFVEARKLFEEM 688



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 148/273 (54%), Gaps = 3/273 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +   + L ++ ++D+A   L   ++   L+PN   +N ++   CK G +E   +
Sbjct: 450 PNVVTYTALADGLCKNGEIDVANELLHEMSRK-GLQPNVYTYNTIVNGLCKIGNIEQTVK 508

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +++EM  +   YP+ ITY+TL+D  CK G   +A EL   M++K ++ P  +T+NVL++G
Sbjct: 509 LMEEMDLAGF-YPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK-RLQPTLVTFNVLMNG 566

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC  G ++  ++++E+M   G  PN   + +LM  +C +  ++   E++  M +  + PD
Sbjct: 567 FCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPD 626

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           +  Y  LI   C+A  + EA  L KEM E+G      T++ ++ G  +  K  EA  + E
Sbjct: 627 SNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFE 686

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           ++   G+   K  Y I ++ + ++G  E  +EL
Sbjct: 687 EMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 164/298 (55%), Gaps = 2/298 (0%)

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           C    ++ A +V +E  +  + + N ++ + ++  LC+ G+ REA  L  +M  +    P
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCW-NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGN-FP 275

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D ++Y V++ G+CR G++D+  K+++ +K  G  P+ + Y  ++   CK G++ EA+++ 
Sbjct: 276 DVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLL 335

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
             M+ + + PD + YTT+I+ FC+ G V  A +L  EM+ +    DIVT+  ++ G+C+ 
Sbjct: 336 RGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKS 395

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           GK+ EA  M  ++   G+  ++ +Y  +++  C+ GE+++A  +   M+ +G  P+  T 
Sbjct: 396 GKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTY 455

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             L   LCK G  + A   L  +   G +P   ++  +V  +C+   +    +L++E+
Sbjct: 456 TALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 140/281 (49%), Gaps = 14/281 (4%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +  L    CK G ++ A E+L EM +  +  PN+ TY+T+++GLCK G   + 
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ-PNVYTYNTIVNGLCKIGNIEQT 506

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L EEM       PD +TY  L+D +C+ G++ +A +++  M N    P +  +  LMN
Sbjct: 507 VKLMEEM-DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMN 565

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC  G L++ + + + M    + P+   + +L+  +C    +    E+ K M +RG   
Sbjct: 566 GFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMP 625

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+NI++ G C+   ++EA  + +++   G  +  A+Y  ++    ++ +  +A +L 
Sbjct: 626 DSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLF 685

Query: 438 RLMLCRGFLP-----------HYATSN-ELLVRLCKAGMAE 466
             M   G +            +Y   N E+ + LC   M E
Sbjct: 686 EEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTE 726



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 39/312 (12%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QKG   N  TY  + D L +  + +  + +L +M+ +  +              N   + 
Sbjct: 445 QKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ-------------PNVYTYN 491

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            ++    KI  I +    ++             ++DLA  +           P+T  +  
Sbjct: 492 TIVNGLCKIGNIEQTVKLME-------------EMDLAGFY-----------PDTITYTT 527

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+  +CK G +  A E+L+ M   ++  P L+T++ L++G C +G   +   L E M+ K
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQ-PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I+P+A T+N L+  +C    +    +I + M + G  P+   Y  L+ G CK   ++E
Sbjct: 587 G-IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +  EM           Y  LI  F +  +  EA +L +EM++ G  A+   ++I + 
Sbjct: 646 AWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705

Query: 388 GLCREGKIEEAL 399
               EG  E  L
Sbjct: 706 VNYEEGNWEITL 717



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 176/374 (47%), Gaps = 32/374 (8%)

Query: 149 VLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           VL +F+     ++++  P+L+++   ++L + SN +  A+                    
Sbjct: 96  VLNLFNWAKSQSQQQFHPTLESLCIVVHLSVASNDIQTAKR------------------- 136

Query: 207 ILIKHHCKRGTLE--SAFEVLKEM----KKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
            L+   C +  ++   +F +  EM     K   S+P  + +      L +NG   EA +L
Sbjct: 137 -LVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHP--LVFDLYFQVLVENGFVLEAQKL 193

Query: 261 FEEMVSKDQILPDALTYNVLIDGF-CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           F +++ +  ++    + N+ +    C    +  A K+ E     G   N  +   +++  
Sbjct: 194 FHKLL-RYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCL 252

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ GK++EA  +  +M +    PD + Y  +++ +CR G +D+ L+L+ E+K +G K D 
Sbjct: 253 CQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDE 312

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N I+  LC+ G++ EA  +L  +   G++ +   Y  V++  C+ G +  A +L   
Sbjct: 313 YIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDE 372

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +  +P   T   ++  +CK+G   +A      ++  G +P+  ++  L++  C+  +
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE 432

Query: 500 LLFAFELLDELVIK 513
           +  AF + +++V K
Sbjct: 433 MKEAFSVHNQMVQK 446


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 230/438 (52%), Gaps = 10/438 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ++++F     Q+G+ H+   Y  ++DKL    +F+ +D +L+QM  E C F E +F+ +M
Sbjct: 77  SMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIM 136

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           +++    L  +   +   +  +   +P+ K+ +  L +L+  N   +A N   Y      
Sbjct: 137 RYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVF-YDMLSRG 195

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P    F +++K  C    ++SA  +L++M K     PN I Y  LI  L +N R  EA
Sbjct: 196 ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTK-HGCVPNSIIYQMLIHALSENNRVNEA 254

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L EEM       PD  T+N +I G C+ G++  A K+ + M       +      LM+
Sbjct: 255 MKLLEEMFLMG-CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMH 313

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL-KEMKERGCK 376
           G C+ GK+ EA+ +  ++ N    P+T+ Y TLIN +  +GR +EA +LL K M   G +
Sbjct: 314 GLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFE 369

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D  TFNI++ GLC++G +  AL  L+++   G   N  +Y I+++  C++G  E+A ++
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELIC 495
           +  M  +G   +    N L+  LCK G  +D A+ ++G +   G KP+  ++  L+  +C
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQD-ALQMYGEMSSKGCKPDIYTFNSLIYGLC 488

Query: 496 RGRKLLFAFELLDELVIK 513
           +  K+  A  L  +++++
Sbjct: 489 KNDKMEEALGLYRDMLLE 506



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 186/332 (56%), Gaps = 2/332 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    +T +N  + S + + A++ L  +      +P+   FNI+I   CK+G L SA E
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            L EM K     PN+ITY+ LIDG CK G F EA ++   M +K   L + + YN LI  
Sbjct: 394 FLDEMVKKGFE-PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSL-NTVGYNCLIGA 451

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ GK+  A ++   M + GC P+++ + +L+ G CK  K++EA  ++ +M    +  +
Sbjct: 452 LCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIAN 511

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ Y TLI+ F R   + +A +L+ EM+ RGC  D +T+N ++  LC+ G  E+ LG++E
Sbjct: 512 TVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIE 571

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           +++ + I+ +  S  I++N  C+ G++  A++ LR M+ RG  P   T N L+  LCK G
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMG 631

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
             ++A     GL   G  P++ ++  L+   C
Sbjct: 632 RFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 229/458 (50%), Gaps = 18/458 (3%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           F S+   + ++     P+ A  +F  +   +G +    T+  ++       + ++  ++L
Sbjct: 165 FKSYNVVLEILVAGNCPKVAPNVFYDML-SRGISPTVYTFGVVMKAFCMVNEVDSACSLL 223

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           R MT   C  +  I+  L+   S  +     +++  ++  +  E P ++  +  ++ L +
Sbjct: 224 RDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCE-PDVQTFNDVIHGLCK 282

Query: 179 SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           + ++  A     +    LR    +  I   L+   C+ G ++ A  +L     S++  PN
Sbjct: 283 AGRIHEAAKL--HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAML-----SKIPNPN 335

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            + Y+TLI+G   +GRF EA +L  + +      PDA T+N++IDG C+ G +  A + +
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   G  PNV  YT L++GFCK+G  +EA +V + M    L  +T+GY  LI   C+ 
Sbjct: 396 DEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKD 455

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G++ +AL++  EM  +GCK DI TFN ++ GLC+  K+EEALG+   +  +G+  N  +Y
Sbjct: 456 GKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTY 515

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++   +   +++A +L+  M  RG      T N L+  LCK G  E       GL+E
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC----LGLIE 571

Query: 478 MGFK----PESDSWALLVELICRGRKLLFAFELLDELV 511
             F     P  +S  +L+   CR  K+  A + L +++
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 150/277 (54%), Gaps = 2/277 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  NT  +N LI   CK G ++ A ++  EM  S+   P++ T+++LI GLCKN +  EA
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMS-SKGCKPDIYTFNSLIYGLCKNDKMEEA 496

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L+ +M+  + ++ + +TYN LI  F R   + +A K++  M+  GC  +   Y  L+ 
Sbjct: 497 LGLYRDML-LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIK 555

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK G  ++   + ++M    + P       LIN FCR G+V++AL+ L++M +RG   
Sbjct: 556 ALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTP 615

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DIVT+N ++ GLC+ G+ +EAL +   L   GI+ +  +Y  +++  C +G    A +LL
Sbjct: 616 DIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLL 675

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
              +  GF+P+  T + L+    K     +    L G
Sbjct: 676 FKGVSNGFIPNEITWSILINYFVKNNSDSEQFTILMG 712



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 174/357 (48%), Gaps = 26/357 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE  + +  +KGF  N  TY  ++D   +   FE    V+  M+       +G+ LN +
Sbjct: 391 ALEFLDEMV-KKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS------AKGLSLNTV 443

Query: 138 KHFSNCSLH--------ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
            +  NC +         +  L+M+ ++      KP +   ++ +  L ++++++ A    
Sbjct: 444 GY--NCLIGALCKDGKIQDALQMYGEMSS-KGCKPDIYTFNSLIYGLCKNDKMEEALGL- 499

Query: 190 KYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
            Y +  L  +  NT  +N LI    +   ++ A +++ EM+       N ITY+ LI  L
Sbjct: 500 -YRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN-ITYNGLIKAL 557

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           CK G   + + L E+M   ++I P   + N+LI+ FCR GKV+ A + +  M   G  P+
Sbjct: 558 CKTGATEKCLGLIEQMFG-EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPD 616

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           +  Y +L+NG CK G+ QEA  +F+ ++   + PD + Y TLI+ +C  G  ++A +LL 
Sbjct: 617 IVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLF 676

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           +    G   + +T++I++    +     E   +L   W  G +L  A  R V +  C
Sbjct: 677 KGVSNGFIPNEITWSILINYFVKNNSDSEQFTILMGNW--GFWL-AAIIRHVSSIGC 730


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 237/494 (47%), Gaps = 79/494 (15%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY +++  L + K+ E     L +M  +   FH  ++       + C +  R+ E    
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSK--GFHPDVYTYTAVIHALC-VENRLHEARKF 68

Query: 156 IHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +  +      P++   +  ++ L +  +VD A   L  S    +  P    +N LI   C
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALL--SKMRKKCVPTAVTYNSLISGLC 126

Query: 214 KRGTLESAFEVLKEM----------------------KKSQMSY------------PNLI 239
           K      A+++L+EM                      KKS  +             P+++
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TYS LIDGLCK GR +EAI+LF  M+     +P+ +TYN LI GFCR GK+D A  ++E 
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G +P+V  YTTLMNGFCK  +L +A ++ ++M    L PD + +T+L++  CR  R
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG-MLEKL-----------WY 407
           + +A+ +L EM+ + C   + T+N IL G CR  ++EEA   MLE++             
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMI 366

Query: 408 DGI-YLNKAS--------------------YRIVLNFSCQKGELEKAIELLRLMLCR-GF 445
            G+  +N++S                    Y  V++  C++ ++++A  + R ML   G 
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           LP+  T + L+  LC AGM + A     G +E G  P   ++ LL++   +  +   A E
Sbjct: 427 LPNSITYSTLITGLCNAGMLDRAR----GYIEKGCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 506 LLDELVIKESGTIQ 519
           LLD++V +  G +Q
Sbjct: 483 LLDDMVQRGFGGVQ 496



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 154/278 (55%), Gaps = 3/278 (1%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           + +TY++LI GLCK  R  +A+    +MVSK    PD  TY  +I   C   ++  A+K 
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKG-FHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +E M N    PNV  YT L++G CK G++ EA  +  +M+   + P  + Y +LI+  C+
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCK 127

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           A R  EA +LL+EM   GC  DI T+  ++ G C+  K ++AL + E+L   G   +  +
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGF-LPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           Y  +++  C++G L++AI+L   M+  G  +P+  T N L+   C+ G  ++A   L  +
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            E G  P+  ++  L+   C+  +L  A++LL+++  K
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 146/256 (57%), Gaps = 6/256 (2%)

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           MV+ +    D +TY  LI G C+  ++++A   +  M + G +P+V+ YT +++  C E 
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +L EA++  +EM N  L P+ + YT LI+  C+ GRVDEA+ LL +M+++ C    VT+N
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYN 119

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC+  +  EA  +LE++ Y G   +  +Y  ++   C+  + + A+ +   ++ R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGF-KPESDSWALLVELICRGRKLL 501
           GF P   T + L+  LCK G  ++ AI LFG +++ G   P + ++  L+   CR  K+ 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKE-AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238

Query: 502 FAFELLDELVIKESGT 517
            A  LL+ +   E+G+
Sbjct: 239 EAMNLLERMA--ETGS 252



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 160/338 (47%), Gaps = 46/338 (13%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEG 131
           K+   AL +F  +   +GF  +  TY+ ++D L +  +  EA+D   R +   +C  +  
Sbjct: 164 KKSDDALRVFEQLV-ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            + +L+  F      +  + +  ++   T   P +   +T +N   +  ++D A + L  
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAE-TGSSPDVVTYTTLMNGFCKLARLDDAYDLL-- 279

Query: 192 SNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
            NQ  R  L P+   F  L+   C+   L  A  +L EM++   S P + TY+T++DG C
Sbjct: 280 -NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS-PTVYTYNTILDGYC 337

Query: 250 KNGRFREAIE-LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           +  +  EA + + EEM       P+ +++N++I G C+  +   A +++E  +   CNP+
Sbjct: 338 RANQLEEARKFMLEEM----DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVD------ 361
           V  YTT+++G C+E K+ EA  V+ +M +     P++I Y+TLI   C AG +D      
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI 453

Query: 362 -------------------------EALELLKEMKERG 374
                                    +A ELL +M +RG
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 229/481 (47%), Gaps = 53/481 (11%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           SL     +PQ AL  FN ++ + GF HN  +Y+++L+ L R +     + +   M    C
Sbjct: 73  SLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCC 132

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPIT--REKPSLKAISTCLN-----LLIE- 178
              + +F               VLE+F K++     + KP+L+  +T L      LLI+ 
Sbjct: 133 SIEDVLF---------------VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE 177

Query: 179 ---------SNQVD--------LAQNFLKYSNQ-----------HLRLKPNTCIFNILIK 210
                    +NQ+         +   + K  N               L P+T  +  LI 
Sbjct: 178 MKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLIL 237

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            HC+   +++A+EV   M +      N ++Y+ LI GLC+ GR  EA++LF +M ++D  
Sbjct: 238 GHCRNKGVDNAYEVFLIMPQKGCQR-NEVSYTNLIHGLCEAGRINEALKLFADM-TEDNC 295

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            P   TY VLI      G+   A  +   MK  GC PNV  YT L++G CKE K+ EA++
Sbjct: 296 CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARK 355

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  EM    L P  + Y  LI+ +C+ G +D+A E+L  M+   C  +  T+N ++ GLC
Sbjct: 356 MLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLC 415

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           ++ K+ +A+ +L K+    +  +  +Y  +++  C+  +LE A  LL LM   G +P   
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW 475

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T +  +  LCK G  E+A      +   G K     +  L++  C+  K+  A+ LL+ +
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535

Query: 511 V 511
           +
Sbjct: 536 L 536



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 221/437 (50%), Gaps = 11/437 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F  +  QKG   N  +Y  ++  L    +      +   MT + C      +  L+
Sbjct: 248 AYEVF-LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
              S        L +F+++    +EK   P++   +  ++ L + N++D A+  L   ++
Sbjct: 307 YALSGSGRKVEALNLFNEM----KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              L P+   +N LI  +CK G ++ AFE+L ++ +S    PN  TY+ LI GLCK  + 
Sbjct: 363 K-GLIPSVVTYNALIDGYCKEGMIDDAFEIL-DLMESNSCGPNTRTYNELICGLCKKRKV 420

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A+ L  +M+ + ++ P  +TYN LI G C+   ++ A +++  M  NG  P+ + Y+ 
Sbjct: 421 HKAMALLNKMLER-KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            ++  CKEG+++EA  +FD +K   +K + + YT LI+ +C+ G++D A  LL+ M    
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           C  +  T+N+++ GLC+E K++EA  ++ K+   G+     +Y I++    + G  + A+
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++   M+  G+ P   T    L      GM E+    +  + E G  P+  ++ +L++  
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 495 CRGRKLLFAFELLDELV 511
            R      AF+ L  +V
Sbjct: 660 ARLGLTHRAFDFLKCMV 676



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 202/446 (45%), Gaps = 40/446 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI + + E      N  TY  ++  L + +K     A+L +M  E       I  N +
Sbjct: 388 AFEILDLM-ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM-LERKLSPSLITYNSL 445

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            H   C +++  LE  +++  +  E    P     S  ++ L +  +V+ A      S +
Sbjct: 446 IH-GQCKVND--LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD-SVK 501

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              +K N  I+  LI  +CK G ++ A+ +L+ M  +    PN  TY+ LI+GLCK  + 
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML-NDACLPNSYTYNVLIEGLCKEKKM 560

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           +EA  L  +M++   + P  +TY +LI    + G  D A K+   M + G  P+V  YT 
Sbjct: 561 KEASSLVAKMLTMG-VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            ++ +  +G L+E  +V  +M    + PD + YT LI+ + R G    A + LK M + G
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 375 CKADIVTFNIILGGLCREGKIEE-----------------------------ALGMLEKL 405
           CK  +   +I++  L  E +++E                             AL + EK+
Sbjct: 680 CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKM 739

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G  ++ + Y  ++   CQ+  LE+A  L+  M  RG  P     N LL   CK G+ 
Sbjct: 740 VEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVY 799

Query: 466 EDAAIALFGLVEMGFKPESDSWALLV 491
            +A   +  +VE G  P  +S+ LLV
Sbjct: 800 AEAVRLVDAMVENGLLPLLESYKLLV 825



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 153/329 (46%), Gaps = 45/329 (13%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN+  +N+LI+  CK   ++ A  ++ +M    +  P ++TY+ LI  + K+G F  A++
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK-PTVVTYTILIGEMLKDGAFDHALK 600

Query: 260 LFEEMVS----------------------------------KDQILPDALTYNVLIDGFC 285
           +F  MVS                                  ++ ILPD +TY VLIDG+ 
Sbjct: 601 VFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF--DEMKNFLLKPD 343
           R G   RA   ++ M + GC P+++  + L+     E +++E +     D + N      
Sbjct: 661 RLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNV----- 715

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
               +  I    +    + AL+L ++M E GC  D+  +  ++ G C++ ++EEA G++ 
Sbjct: 716 ---NSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 772

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G+  ++  Y  +L+  C+ G   +A+ L+  M+  G LP   +   L+  L   G
Sbjct: 773 HMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 832

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVE 492
             E A     GL+  G+  +  +W +L++
Sbjct: 833 SNEKAKAVFHGLLSCGYNYDEVAWKVLID 861



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/418 (22%), Positives = 185/418 (44%), Gaps = 36/418 (8%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           +F++V + KG   N   Y  ++D   +  K +   ++L +M  + C  +   +  L++  
Sbjct: 496 LFDSV-KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 141 SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL-- 198
                 +    +  K+  +   KP++   +  +  +++    D A   LK  N  + L  
Sbjct: 555 CKEKKMKEASSLVAKMLTMGV-KPTVVTYTILIGEMLKDGAFDHA---LKVFNHMVSLGY 610

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+ C +   +  +  +G LE   +V+ +M +  +  P+L+TY+ LIDG  + G    A 
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI-LPDLVTYTVLIDGYARLGLTHRAF 669

Query: 259 ELFEEMVSKD--------QILPDALTYN---------VLIDGFCRGGKVDRAK------- 294
           +  + MV            IL   L++          + ID       VD A        
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEY 729

Query: 295 ----KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
               K+ E M  +GC  +V  Y  L+ GFC++ +L+EA+ +   MK   + P    Y +L
Sbjct: 730 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 789

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           ++C C+ G   EA+ L+  M E G    + ++ +++ GL  EG  E+A  +   L   G 
Sbjct: 790 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 849

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             ++ +++++++   ++  +++  EL+ +M  +        +   L+RL  A   + A
Sbjct: 850 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGA 907


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 225/450 (50%), Gaps = 33/450 (7%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   +   Y  +L+ L +  + E V  +L +M     +     +  ++        +
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E   ++  K+    +  P +   ++ ++   + +++D A+  L+      R  P    + 
Sbjct: 249 EEAGKILEKMIE-KKCGPDVVTYNSLMDGFCKVSKMDEAERLLE-DMVGRRCAPTVITYT 306

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI    +   L  A+ V+++M K+ +S P+L+TY+ L+DGLCK G+  EA EL E MV 
Sbjct: 307 TLIGGFSRADRLADAYRVMEDMFKAGIS-PDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           KD   PD +TY++L++G C+ GKVD A+ ++E M   GC PN+  + T+++GFCK GK+ 
Sbjct: 366 KD-CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRA----------------------------- 357
           E  +V + MK     PD + Y+TLI+ +C+A                             
Sbjct: 425 EGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCST 484

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G+V+EA E++  M ++GC      + +I+GGLC   + +EAL ML+ +   G   N  +Y
Sbjct: 485 GKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTY 544

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I++N  C+   +E AI +L +ML +G +P  AT   L+   CK    + A      + +
Sbjct: 545 SILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRD 604

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELL 507
            G +P+  ++ +L+   C+   +  A E++
Sbjct: 605 SGCEPDKLAYNILISGFCQSGNVEKAIEVM 634



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 232/449 (51%), Gaps = 11/449 (2%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           ++GA I+        +  LEI N +  ++ F+ +  T+ TIL    +    +   +  R 
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARR-FSPDVITHNTILKAYCQIGDLDRALSHFRG 84

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIE 178
             +  C      +  L+     C   +R+ E +  +  + ++   P     +  +  L +
Sbjct: 85  KMW--CSPTAFTYCILIHGLCQC---QRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
             ++D A+N LK   +     P+   +  LI   C+   L+ A +++++MK+S ++ P+ 
Sbjct: 140 MGKIDAARNVLKMMLER-SCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLT-PDT 197

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           + Y+ L++GLCK  +  E  +L EEMV   +  PD  +YN ++   C  GK + A KI+E
Sbjct: 198 VAYNALLNGLCKQNQLEEVSKLLEEMVEAGR-EPDTFSYNTVVACLCESGKYEEAGKILE 256

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M    C P+V  Y +LM+GFCK  K+ EA+ + ++M      P  I YTTLI  F RA 
Sbjct: 257 KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRAD 316

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           R+ +A  ++++M + G   D+VT+N +L GLC+ GK+EEA  +LE +       +  +Y 
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I++N  C+ G+++ A  LL +ML RG  P+  T N ++   CKAG  ++    L  + E+
Sbjct: 377 ILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELL 507
              P+  +++ L++  C+  ++  AF +L
Sbjct: 437 SCTPDVVTYSTLIDGYCKANRMQDAFAIL 465



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 218/433 (50%), Gaps = 41/433 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL-- 145
           + G   +  +Y T++  L    K+E    +L +M  + C      + +LM  F   S   
Sbjct: 225 EAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMD 284

Query: 146 -HERVLE-MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
             ER+LE M  +     R  P++   +T +     ++++  A   ++   +   + P+  
Sbjct: 285 EAERLLEDMVGR-----RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKA-GISPDLV 338

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N L+   CK G LE A E+L+ M +   + P+++TYS L++GLCK G+  +A  L E 
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDCA-PDVVTYSILVNGLCKLGKVDDARLLLEM 397

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE- 322
           M+ +    P+ +T+N +IDGFC+ GKVD   K++E MK   C P+V  Y+TL++G+CK  
Sbjct: 398 MLERG-CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKAN 456

Query: 323 ----------------------------GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
                                       GK++EA+EV D M      P +  Y  +I   
Sbjct: 457 RMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGL 516

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C   R DEAL++L+ M ERGC+ ++ T++I++ GLC+  ++E+A+ +L+ +   G   + 
Sbjct: 517 CDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDV 576

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           A+Y  +++  C+  +++ A +  + M   G  P     N L+   C++G  E A   +  
Sbjct: 577 ATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQL 636

Query: 475 LVEMGFKPESDSW 487
           ++E G  P++ ++
Sbjct: 637 MLEKGCNPDAATY 649



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 188/353 (53%), Gaps = 6/353 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLESA 221
           PS  + ST   L+   ++   ++  L+ +N+ L  R  P+    N ++K +C+ G L+ A
Sbjct: 19  PSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA 78

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
              L   +      P   TY  LI GLC+  R  EA +L +EM+ KD   PDA  YN LI
Sbjct: 79  ---LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD-CHPDAAVYNCLI 134

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ GK+D A+ +++ M    C P+V  YT+L+ G C+   L EA+++ ++MK   L 
Sbjct: 135 AGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLT 194

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PDT+ Y  L+N  C+  +++E  +LL+EM E G + D  ++N ++  LC  GK EEA  +
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKI 254

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LEK+       +  +Y  +++  C+  ++++A  LL  M+ R   P   T   L+    +
Sbjct: 255 LEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSR 314

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           A    DA   +  + + G  P+  ++  L++ +C+  KL  A ELL+ +V K+
Sbjct: 315 ADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 153/281 (54%), Gaps = 3/281 (1%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S  S P+  TY  LI G  + G  +  +E+  EM+++ +  PD +T+N ++  +C+ G +
Sbjct: 17  SDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLAR-RFSPDVITHNTILKAYCQIGDL 75

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           DRA  +  F     C+P  F Y  L++G C+  ++ EA ++ DEM      PD   Y  L
Sbjct: 76  DRA--LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCL 133

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I   C+ G++D A  +LK M ER C  D++T+  ++ G C+   ++EA  ++EK+   G+
Sbjct: 134 IAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGL 193

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  +Y  +LN  C++ +LE+  +LL  M+  G  P   + N ++  LC++G  E+A  
Sbjct: 194 TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGK 253

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L  ++E    P+  ++  L++  C+  K+  A  LL+++V
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 167/366 (45%), Gaps = 80/366 (21%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV----LEM 152
           TY T++   +R  +      V+  M      F  GI  +L+ +  NC L        LE 
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDM------FKAGISPDLVTY--NCLLDGLCKAGKLEE 355

Query: 153 FHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            H++  +  EK   P +   S  +N L +  +VD A+  L+   +    +PN   FN +I
Sbjct: 356 AHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER-GCQPNLVTFNTMI 414

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG---------------------- 247
              CK G ++   +VL+ MK+   + P+++TYSTLIDG                      
Sbjct: 415 DGFCKAGKVDEGHKVLELMKEVSCT-PDVVTYSTLIDGYCKANRMQDAFAILGISPDKAS 473

Query: 248 -------LCKNGRFREAIELFEEMVSK----------------------DQIL------- 271
                  LC  G+  EA E+ + M  +                      D+ L       
Sbjct: 474 YSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMS 533

Query: 272 -----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                P+  TY++LI+G C+  +V+ A  +++ M   GC P+V  YT+L++GFCK  K+ 
Sbjct: 534 ERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMD 593

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A + F  M++   +PD + Y  LI+ FC++G V++A+E+++ M E+GC  D  T+  ++
Sbjct: 594 AAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653

Query: 387 GGLCRE 392
             L  E
Sbjct: 654 RSLTTE 659



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 3/264 (1%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           R  E    F E  S D   P   TY  LI GF R G      +I   M     +P+V  +
Sbjct: 4   RPLEGYSFFRERFS-DPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITH 62

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            T++  +C+ G L  A   F         P    Y  LI+  C+  R+DEA +LL EM +
Sbjct: 63  NTILKAYCQIGDLDRALSHF--RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           + C  D   +N ++ GLC+ GKI+ A  +L+ +       +  +Y  ++   CQ   L++
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A +L+  M   G  P     N LL  LCK    E+ +  L  +VE G +P++ S+  +V 
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVA 240

Query: 493 LICRGRKLLFAFELLDELVIKESG 516
            +C   K   A ++L++++ K+ G
Sbjct: 241 CLCESGKYEEAGKILEKMIEKKCG 264


>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 483

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 225/431 (52%), Gaps = 42/431 (9%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           ++ +K  ++P  AL +F+    Q GF H+  +Y+ ++ KLAR ++FEAV+ VL  +    
Sbjct: 52  VNNVKEVEDPDKALSLFHDYL-QNGFRHDYPSYSALVYKLARSRRFEAVETVLGYLQDFN 110

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV-DL 184
            +  + +F+ L +H+    L  + + +F+++      + +L++ +  LN+L++++++ D 
Sbjct: 111 VRCRDTLFIALFEHYGKVGLVAKAIRLFNEMTGFNCIR-TLQSFNALLNVLVDNDRLFDA 169

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
            Q F + S    RL  N+  FNILIK   K+G    A +V  EM + ++  P+++TY++L
Sbjct: 170 KQLFDRSSEMGFRL--NSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVE-PSVVTYNSL 226

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           I  LC+NG   +A  LF++M+ K +  P+A+TY +L++G C  G+   AKK++  M+  G
Sbjct: 227 IGYLCRNGELGKAKGLFKDMIKKGK-RPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRG 285

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C P   N+  LMN   K+GK++EAK +  EMK    +PD + Y  LIN  C+ G+V EA 
Sbjct: 286 CKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAY 345

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           + L EM+  GC+A+  T+ ++  G C+ G+ EE L                         
Sbjct: 346 KTLFEMQIGGCEANAATYRMLADGFCQVGEFEEGL------------------------- 380

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
                     ++L  ML     P   T N  +V L K+G  + A   L  + +     +S
Sbjct: 381 ----------KVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDS 430

Query: 485 DSWALLVELIC 495
           D W  LV   C
Sbjct: 431 DGWEALVRCCC 441



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 176/366 (48%), Gaps = 8/366 (2%)

Query: 147 ERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           ++ L +FH    +    + PS  A+   +  L  S + +  +  L Y  Q   ++    +
Sbjct: 62  DKALSLFHDYLQNGFRHDYPSYSAL---VYKLARSRRFEAVETVLGYL-QDFNVRCRDTL 117

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F  L +H+ K G +  A  +  EM         L +++ L++ L  N R  +A +LF+  
Sbjct: 118 FIALFEHYGKVGLVAKAIRLFNEMTGFN-CIRTLQSFNALLNVLVDNDRLFDAKQLFDR- 175

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            S+     +++ +N+LI G+ + G+  +A K+ + M      P+V  Y +L+   C+ G+
Sbjct: 176 SSEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGE 235

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +AK +F +M     +P+ + Y  L+   C  G   EA ++L +M+ RGCK   + F +
Sbjct: 236 LGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGV 295

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  L ++GKIEEA  +L ++       +   Y I++N  C++G++ +A + L  M   G
Sbjct: 296 LMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGG 355

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
              + AT   L    C+ G  E+    L  ++     P  +++   V  + +   +  AF
Sbjct: 356 CEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAF 415

Query: 505 ELLDEL 510
            +L+E+
Sbjct: 416 FVLEEM 421



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 138/272 (50%), Gaps = 1/272 (0%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           +  L +   K G   +AI LF EM   + I     ++N L++      ++  AK++ +  
Sbjct: 118 FIALFEHYGKVGLVAKAIRLFNEMTGFNCI-RTLQSFNALLNVLVDNDRLFDAKQLFDRS 176

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G   N   +  L+ G+ K+G+  +A +VFDEM    ++P  + Y +LI   CR G +
Sbjct: 177 SEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGEL 236

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            +A  L K+M ++G + + VT+ +++ GLC  G+ +EA  ML  + Y G      ++ ++
Sbjct: 237 GKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVL 296

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +N   +KG++E+A  LL  M  R F P     N L+  LCK G   +A   LF +   G 
Sbjct: 297 MNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGC 356

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVI 512
           +  + ++ +L +  C+  +     ++L+ +++
Sbjct: 357 EANAATYRMLADGFCQVGEFEEGLKVLNAMLV 388


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 247/541 (45%), Gaps = 74/541 (13%)

Query: 19  TSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGA------------AI 66
           +S +SLP I  L+           PV+ S   +    R  +  H +              
Sbjct: 22  SSIASLPQILSLD---------SEPVDLSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVS 72

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           SL     +PQ AL  FN ++ + GF HN  +Y+++L+ L R +     + +   M    C
Sbjct: 73  SLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCC 132

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPIT--REKPSLKAISTCLN-----LLIE- 178
              + +F               VLE+F K++     + KP+L+  +T L      LLI+ 
Sbjct: 133 SIEDVLF---------------VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE 177

Query: 179 ---------SNQVD--------LAQNFLKYSNQ-----------HLRLKPNTCIFNILIK 210
                    +NQ+         +   + K  N               L P+T  +  LI 
Sbjct: 178 MKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLIL 237

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            HC+   +++A+EV   M +      N ++Y+ LI GLC+ GR  EA++LF +M ++D  
Sbjct: 238 GHCRNKGVDNAYEVFLIMPQKGCQR-NEVSYTNLIHGLCEAGRINEALKLFADM-TEDNC 295

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            P   TY VLI      G+   A  +   MK  GC PNV  YT L++G CKE K+ EA++
Sbjct: 296 CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARK 355

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  EM    L P  + Y  LI+ +C+ G +D+A E+L  M+   C  +  T+N ++ GLC
Sbjct: 356 MLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLC 415

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           ++ K+ +A+ +L K+    +  +  +Y  +++  C+  +LE A  LL LM   G +P   
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW 475

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T +  +  LCK G  E+A      +   G K     +  L++  C+  K+  A+ LL+ +
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535

Query: 511 V 511
           +
Sbjct: 536 L 536



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 220/437 (50%), Gaps = 11/437 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F  +  QKG   N  +Y  ++  L    +      +   MT + C      +  L+
Sbjct: 248 AYEVF-LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
              S        L +F+++    +EK   P++   +  ++ L + N++D A+  L   ++
Sbjct: 307 YALSGSGRKVEALNLFNEM----KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              L P+   +N LI  +CK G ++ AFE+L  M+ +    PN  TY+ LI GLCK  + 
Sbjct: 363 K-GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG-PNTRTYNELICGLCKKRKV 420

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A+ L  +M+ + ++ P  +TYN LI G C+   ++ A +++  M  NG  P+ + Y+ 
Sbjct: 421 HKAMALLNKMLER-KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            ++  CKEG+++EA  +FD +K   +K + + YT LI+ +C+ G++D A  LL+ M    
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           C  +  T+N+++ GLC+E K++EA  ++ K+   G+     +Y I++    + G  + A+
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++   M+  G+ P   T    L      GM E+    +  + E G  P+  ++ +L++  
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 495 CRGRKLLFAFELLDELV 511
            R      AF+ L  +V
Sbjct: 660 ARLGLTHRAFDFLKCMV 676



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 202/435 (46%), Gaps = 29/435 (6%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI + + E      N  TY  ++  L + +K     A+L +M  E       I  N +
Sbjct: 388 AFEILDLM-ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML-ERKLSPSLITYNSL 445

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            H   C +++  LE  +++  +  E    P     S  ++ L +  +V+ A      S +
Sbjct: 446 IH-GQCKVND--LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD-SVK 501

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              +K N  I+  LI  +CK G ++ A+ +L+ M  +    PN  TY+ LI+GLCK  + 
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML-NDACLPNSYTYNVLIEGLCKEKKM 560

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           +EA  L  +M++   + P  +TY +LI    + G  D A K+   M + G  P+V  YT 
Sbjct: 561 KEASSLVAKMLTMG-VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            ++ +  +G L+E  +V  +M    + PD + YT LI+ + R G    A + LK M + G
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 375 CKADIVTFNIILGGLCREGKIEE------------------ALGMLEKLWYDGIYLNKAS 416
           CK  +   +I++  L  E +++E                  AL + EK+   G  ++ + 
Sbjct: 680 CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSI 739

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++   CQ+  LE+A  L+  M  RG  P     N LL   CK G+  +A   +  +V
Sbjct: 740 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 799

Query: 477 EMGFKPESDSWALLV 491
           E G  P  +S+ LLV
Sbjct: 800 ENGLLPLLESYKLLV 814



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 184/395 (46%), Gaps = 25/395 (6%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           +F++V + KG   N   Y  ++D   +  K +   ++L +M  + C  +   +  L++  
Sbjct: 496 LFDSV-KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 141 SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL-- 198
                 +    +  K+  +   KP++   +  +  +++    D A   LK  N  + L  
Sbjct: 555 CKEKKMKEASSLVAKMLTMGV-KPTVVTYTILIGEMLKDGAFDHA---LKVFNHMVSLGY 610

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+ C +   +  +  +G LE   +V+ +M +  +  P+L+TY+ LIDG  + G    A 
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI-LPDLVTYTVLIDGYARLGLTHRAF 669

Query: 259 ELFEEMVSKD--------QILPDALTYN---------VLIDGFCRGGKVDRAKKIMEFMK 301
           +  + MV            IL   L++          + ID      + + A K+ E M 
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMV 729

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
            +GC  +V  Y  L+ GFC++ +L+EA+ +   MK   + P    Y +L++C C+ G   
Sbjct: 730 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYA 789

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           EA+ L+  M E G    + ++ +++ GL  EG  E+A  +   L   G   ++ ++++++
Sbjct: 790 EAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLI 849

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +   ++  +++  EL+ +M  +G  P+  T + L+
Sbjct: 850 DGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI 884



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 140/323 (43%), Gaps = 40/323 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++FN +    G+  +  TY   L         E VD V+ +M  E        +  L+
Sbjct: 598 ALKVFNHMVSL-GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ---------VDLAQNF 188
             ++   L  R  + F K    T  KPSL  +S  +  L   N+         +D   N 
Sbjct: 657 DGYARLGLTHRAFD-FLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNT 715

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+Y    + LK    +F  +++H C   T++ +                   Y  LI G 
Sbjct: 716 LEY---EIALK----LFEKMVEHGC---TIDVSI------------------YGALIAGF 747

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C+  R  EA  L   M  +  + P    YN L+D  C+ G    A ++++ M  NG  P 
Sbjct: 748 CQQERLEEAQGLVHHMKERG-MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 806

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           + +Y  L+ G   EG  ++AK VF  + +     D + +  LI+   +   VDE  EL+ 
Sbjct: 807 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 866

Query: 369 EMKERGCKADIVTFNIILGGLCR 391
            M+E+GC+ + +T+++++ GL R
Sbjct: 867 IMEEKGCQPNPLTYSLLIEGLER 889


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 172/315 (54%), Gaps = 2/315 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +   P+T  FN LI+  C RG +  A  V  +M     S P+++TYS L+D  CK   +R
Sbjct: 245 MPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCS-PSVVTYSILLDATCKESGYR 303

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ L +EM +K    PD +TYNVLI+  C  G VD A  I+  + ++GC P+   YT +
Sbjct: 304 QAMALLDEMRAK-GCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPV 362

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +   C   + +E +E+  EM +    PD + + T++   C+ G VD A+E++  M E GC
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGC 422

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
            ADIVT++ IL GLC  G++++A+ +L +L   G   +  +Y  VL   C   + E+A E
Sbjct: 423 VADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEE 482

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+  MLC    P   T N ++  LC+ G+ + A   +  + E G  P+  ++  +++ +C
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542

Query: 496 RGRKLLFAFELLDEL 510
               +  A ELL +L
Sbjct: 543 NESCIDDAMELLSDL 557



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 201/417 (48%), Gaps = 4/417 (0%)

Query: 91  FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVL 150
           F  +  T+  ++  L    +     AV   M +  C      +  L+      S + + +
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
            +  ++     E P +   +  +N +     VD A N L     H   KP+   +  ++K
Sbjct: 307 ALLDEMRAKGCE-PDIVTYNVLINAMCNEGDVDEALNILSNLPSH-GCKPDAVTYTPVLK 364

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             C     +   E+L EM  +  + P+ +T++T++  LC+ G    AIE+ + M S+   
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCA-PDEVTFNTIVTSLCQQGLVDRAIEVVDHM-SEHGC 422

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           + D +TY+ ++DG C  G+VD A +++  +K+ GC P+   YTT++ G C   + + A+E
Sbjct: 423 VADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEE 482

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  EM      PD + + T++   C+ G VD A+ ++++M E GC  DIVT+N I+ GLC
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
            E  I++A+ +L  L   G   +  ++  +L   C     E A +L+  M+     P   
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDEL 602

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           T N ++  LC+ G+   A   L  + E G  P S +++++V+ + +  K   A ELL
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELL 659



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 214/436 (49%), Gaps = 11/436 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL I + +    G   +  TY  +L  L   ++++ V+ +L +MT   C   E  F  ++
Sbjct: 340 ALNILSNLPSH-GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                  L +R +E+   +  H    +   +   S+ L+ L +  +VD A   L     +
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVAD---IVTYSSILDGLCDVGRVDDAVELLSRLKSY 455

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              KP+T  +  ++K  C     E A E++ EM  S    P+ +T++T++  LC+ G   
Sbjct: 456 -GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP-PDEVTFNTVVASLCQKGLVD 513

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            AI + E+M S++   PD +TYN +IDG C    +D A +++  +++ GC P++  + TL
Sbjct: 514 RAIRVVEQM-SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTL 572

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   + ++A+++   M      PD + + T+I   C+ G + +A+E LK M E GC
Sbjct: 573 LKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGC 632

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  T++I++  L + GK + AL +L  +      L   +Y  V++   + G++E+A++
Sbjct: 633 VPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDL--ITYNTVISNLTKAGKMEEALD 690

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LLR+M+  G  P   T   L   +C+    + A   L  + + G  P++  +  ++   C
Sbjct: 691 LLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFC 750

Query: 496 RGRKLLFAFELLDELV 511
           R R+   A +    +V
Sbjct: 751 RDRRTDLAIDCFAHMV 766



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 214/434 (49%), Gaps = 7/434 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +   +G + +  TY+ +LD   +   +    A+L +M  + C+     +  L+
Sbjct: 270 ALAVFDDML-HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               N    +  L +   + P    KP     +  L  L  S +    +  L     +  
Sbjct: 329 NAMCNEGDVDEALNILSNL-PSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSN-N 386

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   FN ++   C++G ++ A EV+  M +      +++TYS+++DGLC  GR  +A
Sbjct: 387 CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSE-HGCVADIVTYSSILDGLCDVGRVDDA 445

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +EL   + S     PD + Y  ++ G C   + +RA+++M  M  + C P+   + T++ 
Sbjct: 446 VELLSRLKSY-GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVA 504

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C++G +  A  V ++M      PD + Y  +I+  C    +D+A+ELL +++  GCK 
Sbjct: 505 SLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP 564

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DIVTFN +L GLC   + E+A  ++  +       ++ ++  V+   CQKG L +AIE L
Sbjct: 565 DIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETL 624

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           ++M   G +P+ +T + ++  L KAG A+ A   L G+      P+  ++  ++  + + 
Sbjct: 625 KIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTN--GTPDLITYNTVISNLTKA 682

Query: 498 RKLLFAFELLDELV 511
            K+  A +LL  +V
Sbjct: 683 GKMEEALDLLRVMV 696



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 172/343 (50%), Gaps = 9/343 (2%)

Query: 173 LNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
           L  L++  ++D A   F   ++   R  P     NILIK  C  G +  A  V   +  S
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
                 ++TY+T+++G C+ GR  +A  L   M       PD  T+N LI   C  G++ 
Sbjct: 217 A----TVVTYNTMVNGYCRAGRIEDARRLINGM----PFPPDTFTFNPLIRALCVRGRIP 268

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A  + + M + GC+P+V  Y+ L++  CKE   ++A  + DEM+    +PD + Y  LI
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C  G VDEAL +L  +   GCK D VT+  +L  LC   + +E   +L ++  +   
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            ++ ++  ++   CQ+G +++AIE++  M   G +    T + +L  LC  G  +DA   
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVEL 448

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L  L   G KP++ ++  +++ +C   +   A EL+ E++  +
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD 491



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 198/403 (49%), Gaps = 7/403 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+ + +SE  G   +  TY++ILD L    + +    +L ++    CK     +  ++
Sbjct: 410 AIEVVDHMSEH-GCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVL 468

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K   +    ER  E+  ++   +   P     +T +  L +   VD A   ++  +++  
Sbjct: 469 KGLCSTEQWERAEELMAEML-CSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN-G 526

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +N +I   C    ++ A E+L +++ S    P+++T++TL+ GLC   R+ +A
Sbjct: 527 CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ-SCGCKPDIVTFNTLLKGLCGVDRWEDA 585

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L   M+ +    PD LT+N +I   C+ G + +A + ++ M  NGC PN   Y+ +++
Sbjct: 586 EQLMANMM-RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVD 644

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              K GK Q A E+   M N    PD I Y T+I+   +AG+++EAL+LL+ M   G   
Sbjct: 645 ALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCP 702

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+  +  G+CRE   + A+ ML ++   G+  +   Y  VL   C+    + AI+  
Sbjct: 703 DTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCF 762

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             M+  G +P  +T   LL  L   G+ ++A   L  L  +G 
Sbjct: 763 AHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805


>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 233/464 (50%), Gaps = 16/464 (3%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S       ++  K P  A   FN + E KGF+HN  TY  +L+ L R K        L 
Sbjct: 83  LSKTTVFQTLRHIKVPTKAFLFFNWIHE-KGFSHNPQTYFIMLEILGREKNLNIARNFLY 141

Query: 120 QMTYET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
            +   +    K  +  F +L++ +    L +  +++F  +  I    P +   ++ L +L
Sbjct: 142 SIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVS-PGVVTFNSVLLVL 200

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           ++  + ++A+       +   +KP+T  +NILI+  CK   ++  F   KEM       P
Sbjct: 201 LKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCD-P 259

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK-DQILPDALTYNVLIDGFCRGGKVDRAKK 295
           +++TY+TL+DGLC+ G+ + A  L   M  K   + PD +TY  LI G+CR  +VD A  
Sbjct: 260 DVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALD 319

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK-NFLLKPDTIGYTTLINCF 354
           I+E M   G  PN+  Y TL+ G C+  K  + KE+ ++MK +    PD   + TLIN  
Sbjct: 320 ILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSH 379

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C AG +DEA ++ + MK+    AD  ++++++  LC++G   +A  + ++L+   I L+ 
Sbjct: 380 CCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSS 439

Query: 415 -------ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
                  ASY+ +  + C+ G+ +KA  +LR ++ RG     +    +L   CK G  E+
Sbjct: 440 YGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGH-CKEGSYEN 498

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
               L  ++   F P+ D +  L++   R  K L A E L++++
Sbjct: 499 GYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKML 542



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 218/440 (49%), Gaps = 28/440 (6%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +Q+  + NN+  A  +  L  YK +   D +L   T    K        + +   +  + 
Sbjct: 47  QQQPRSRNNSKTAKTIANLINYKPWS--DELLSSFTTSLSK------TTVFQTLRHIKVP 98

Query: 147 ERVLEMFHKIHPIT-REKPSLKAISTCLNLLIESNQVDLAQNFL----KYSNQHLRLKPN 201
            +    F+ IH       P    I   L +L     +++A+NFL    K SN  ++L+  
Sbjct: 99  TKAFLFFNWIHEKGFSHNPQTYFI--MLEILGREKNLNIARNFLYSIEKRSNGEVKLEDR 156

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              FN LI+ + + G  + + ++ + MK   +S P ++T+++++  L K GR   A E++
Sbjct: 157 --FFNSLIRSYGEAGLFKESVKLFENMKLIGVS-PGVVTFNSVLLVLLKRGRTNMAKEVY 213

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           +EM+    + PD  TYN+LI GFC+   VD      + M +  C+P+V  Y TL++G C+
Sbjct: 214 DEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCR 273

Query: 322 EGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            GK++ A  + + M  K   L PD + YTTLI  +CR   VDEAL++L+EM  RG K +I
Sbjct: 274 AGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNI 333

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-SYRIVLNFSCQKGELEKAIELLR 438
           VT+N ++ GLC   K ++   +LE++  DG  +  A ++  ++N  C  G L++A ++  
Sbjct: 334 VTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFE 393

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-------MGFKPESDSWALLV 491
            M         A+ + L+  LC+ G    A +    L E        G KP + S+  + 
Sbjct: 394 NMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMF 453

Query: 492 ELICRGRKLLFAFELLDELV 511
           + +C   K   A  +L +L+
Sbjct: 454 QYLCENGKTKKAERVLRQLM 473



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 148/279 (53%), Gaps = 7/279 (2%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EF 299
           +++LI    + G F+E+++LFE M     + P  +T+N ++    + G+ + AK++  E 
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENM-KLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEM 216

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +K  G  P+ + Y  L+ GFCK   + E    F EM +F   PD + Y TL++  CRAG+
Sbjct: 217 LKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGK 276

Query: 360 VDEALELLKEMKERGCK---ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           +  A  L+  M ++ CK    D+VT+  ++ G CR+ +++EAL +LE++   G+  N  +
Sbjct: 277 IKVAHNLVNGMSKK-CKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVT 335

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRG-FLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           Y  ++   C+  + +K  E+L  M   G  +P   T N L+   C AG  ++A      +
Sbjct: 336 YNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENM 395

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            ++    +S S+++L+  +C+      A  L DEL  KE
Sbjct: 396 KKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKE 434



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/430 (23%), Positives = 182/430 (42%), Gaps = 47/430 (10%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSLHERVLEMF 153
            TY T++D L R  K +    ++  M+ +       +  +  L++ +      +  L++ 
Sbjct: 262 VTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDIL 321

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            +++     KP++   +T +  L E+ + D  +  L+         P+ C FN LI  HC
Sbjct: 322 EEMNG-RGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHC 380

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP- 272
             G L+ AF+V + MKK ++S  +  +YS LI  LC+ G + +A  LF+E+  K+ +L  
Sbjct: 381 CAGNLDEAFKVFENMKKLEVS-ADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSS 439

Query: 273 ---------------------------------------DALTYNVLIDGFCRGGKVDRA 293
                                                  D L+Y ++I G C+ G  +  
Sbjct: 440 YGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENG 499

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
             ++ +M      P++  Y  L++GF ++ K   AKE  ++M     KP T  + +++N 
Sbjct: 500 YGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNR 559

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
               G V E+  ++  M ER  + +I      L  L   G  ++A  + E ++ +G  + 
Sbjct: 560 LLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNGFCVK 619

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
                 V+ F C K    +A +LL   L           N +++ LCK   A +A    +
Sbjct: 620 MDE---VVQFLCNKRRALEACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCY 676

Query: 474 GLVEMGFKPE 483
            LV+ G   +
Sbjct: 677 ELVDKGLHQD 686


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 197/378 (52%), Gaps = 17/378 (4%)

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           + +RV E     H + R  P++   +T +N L    +V  A   L    +   L+PN   
Sbjct: 159 VEDRVSEALDLFHQMCR--PNVVTFTTLMNGLCREGRVVEAVALLDRMVED-GLQPNQIT 215

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  ++   CK G   SA  +L++M++     PN++ YS +IDGL K+GR  +A  L+ EM
Sbjct: 216 YGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM 275

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  I PD  TYN +IDGFC  G+   A+++++ M     NPNV  Y+ L+N + KE K
Sbjct: 276 QEKG-IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             EA+E++DEM    + P+TI Y ++I+ FC+  R+D A  +   M  +GC  D+ TFN 
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C   +I++   +L ++   G+  +  +Y  +++  C  G+L  A++L + M+  G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM------------GFKPESDSWALLVE 492
             P   T N LL  LC  G  +D A+ +F  ++             G +P+  ++ +L+ 
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKD-ALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513

Query: 493 LICRGRKLLFAFELLDEL 510
            +    K L A EL  E+
Sbjct: 514 GLINEGKFLEAEELYKEM 531



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 207/432 (47%), Gaps = 52/432 (12%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  T+ T+++ L R  +     A+L +M  +  + ++  +  ++            L + 
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLL 236

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            K+  ++  KP++   S  ++ L +  +   A N L    Q   + P+   +N +I   C
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHN-LYTEMQEKGIFPDLFTYNCMIDGFC 295

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
             G    A  +L+EM + +++ PN++TYS LI+   K  +F EA EL++EM+ +  I+P+
Sbjct: 296 SSGRWSEAQRLLQEMLERKIN-PNVVTYSALINAYVKERKFFEAEELYDEMLPRG-IIPN 353

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TYN +IDGFC+  ++D A+ +   M   GC+P+VF + TL++G+C   ++ +  E+  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT------------ 381
           EM    L  DT  Y TLI+ FC  G ++ AL+L ++M   G   DIVT            
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 382 ----------------------------------FNIILGGLCREGKIEEALGMLEKLWY 407
                                             +NI++ GL  EGK  EA  + +++ +
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            GI  N  +Y  ++N  C++  L++A ++   M  + F P   T N L+   CKAG  +D
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593

Query: 468 AAIALFGLVEMG 479
             + LF   EMG
Sbjct: 594 -GLELF--CEMG 602



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 187/360 (51%), Gaps = 13/360 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++  N N  TY+ +++   + +KF   + +  +M       +   + +++  F   +  +
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
               MF+ +       P +   +T ++    + ++D     L +      L  +T  +N 
Sbjct: 372 AAEHMFY-VMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELL-HEMTETGLVADTTTYNT 429

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   C  G L +A ++ ++M  S +  P+++T +TL+DGLC NG+ ++A+E+F+ M   
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 488

Query: 268 ----------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
                     + + PD  TYN+LI G    GK   A+++ + M + G  PN   Y++++N
Sbjct: 489 KMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMIN 548

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+ +L EA ++FD M +    PD + + TL++ +C+AGRVD+ LEL  EM  RG  A
Sbjct: 549 GLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVA 608

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D +T+  ++ G  + G I  AL + +++   G+Y +  + R +L     K EL++A+ +L
Sbjct: 609 DAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAML 668



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 164/317 (51%), Gaps = 7/317 (2%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +P+   F+ L+   C    +  A ++       QM  PN++T++TL++GLC+ GR  
Sbjct: 141 LGFQPDVVTFSTLLHGLCVEDRVSEALDLFH-----QMCRPNVVTFTTLMNGLCREGRVV 195

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + MV +D + P+ +TY  ++DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 196 EAVALLDRMV-EDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSA 254

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G  K+G+  +A  ++ EM+   + PD   Y  +I+ FC +GR  EA  LL+EM ER 
Sbjct: 255 IIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++VT++ ++    +E K  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAE 374

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +  +M  +G  P   T N L+   C A   +D    L  + E G   ++ ++  L+   
Sbjct: 375 HMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGF 434

Query: 495 CRGRKLLFAFELLDELV 511
           C    L  A +L  +++
Sbjct: 435 CLVGDLNAALDLSQQMI 451



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 160/307 (52%), Gaps = 14/307 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    ++ ++   + N++D A++   Y        P+   FN LI  +C    ++   E
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMF-YVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM ++ +   +  TY+TLI G C  G    A++L ++M+S   + PD +T N L+DG
Sbjct: 411 LLHEMTETGL-VADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDG 468

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L++G   EGK  EA+E++
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELY 528

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            EM +  + P+TI Y+++IN  C+  R+DEA ++   M  +    D+VTFN ++ G C+ 
Sbjct: 529 KEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA 588

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G++++ L +  ++   GI  +  +Y  +++   + G +  A+++ + M+  G  P   T 
Sbjct: 589 GRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITI 648

Query: 453 NELLVRL 459
             +L  L
Sbjct: 649 RSMLTVL 655



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 216/475 (45%), Gaps = 41/475 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  +  +    +   AL +   + E      N   Y+ I+D L +  +      +  
Sbjct: 214 ITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYT 273

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLH-----------ERVL-EMFHKIHPITREKPSLK 167
           +M        +GIF +L  +  NC +            +R+L EM  +     +  P++ 
Sbjct: 274 EMQ------EKGIFPDLFTY--NCMIDGFCSSGRWSEAQRLLQEMLER-----KINPNVV 320

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLK 226
             S  +N  ++  +   A+    Y     R + PNT  +N +I   CK+  L++A  +  
Sbjct: 321 TYSALINAYVKERKFFEAEEL--YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFY 378

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
            M     S P++ T++TLIDG C   R  +  EL  EM ++  ++ D  TYN LI GFC 
Sbjct: 379 VMATKGCS-PDVFTFNTLIDGYCGAKRIDDGTELLHEM-TETGLVADTTTYNTLIHGFCL 436

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL------ 340
            G ++ A  + + M ++G  P++    TL++G C  GKL++A E+F  M+   +      
Sbjct: 437 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASR 496

Query: 341 -----KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                +PD   Y  LI+     G+  EA EL KEM  RG   + +T++ ++ GLC++ ++
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA  M + +       +  ++  +++  C+ G ++  +EL   M  RG +    T   L
Sbjct: 557 DEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITL 616

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +    K G    A      ++  G  P++ +   ++ ++    +L  A  +L++L
Sbjct: 617 IHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 134/259 (51%), Gaps = 6/259 (2%)

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +AI+LF +MV + + LP  + +N L+    R  + D    + + M+      +V+++ 
Sbjct: 58  LEDAIDLFSDMV-RSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFN 116

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+  FC   KL  A   F ++     +PD + ++TL++  C   RV EAL+L  +M   
Sbjct: 117 ILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM--- 173

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            C+ ++VTF  ++ GLCREG++ EA+ +L+++  DG+  N+ +Y  +++  C+ G+   A
Sbjct: 174 -CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSA 232

Query: 434 IELLRLMLCRGFL-PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + LLR M     + P+    + ++  L K G   DA      + E G  P+  ++  +++
Sbjct: 233 LNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMID 292

Query: 493 LICRGRKLLFAFELLDELV 511
             C   +   A  LL E++
Sbjct: 293 GFCSSGRWSEAQRLLQEML 311



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 142/336 (42%), Gaps = 64/336 (19%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY +++D   +  + +A + +   M  + C      F  L+  +      + 
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIE--------SNQVDLAQNFLKYSNQHLRLKP 200
             E+ H++      +  L A +T  N LI         +  +DL+Q  +        + P
Sbjct: 408 GTELLHEM-----TETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG-----VCP 457

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-------------------------- 234
           +    N L+   C  G L+ A E+ K M+KS+M                           
Sbjct: 458 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLIN 517

Query: 235 -------------------YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
                               PN ITYS++I+GLCK  R  EA ++F+ M SK    PD +
Sbjct: 518 EGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK-SFSPDVV 576

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           T+N L+ G+C+ G+VD   ++   M   G   +   Y TL++GF K G +  A ++F EM
Sbjct: 577 TFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
            +  + PDTI   +++        +  A+ +L++++
Sbjct: 637 ISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/314 (35%), Positives = 177/314 (56%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +N LI   CK+  ++ A  +L+ M    ++  NLI+Y+++I+GLC  GR  E 
Sbjct: 238 ISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVA-ANLISYNSVINGLCGKGRMSEV 296

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL EEM  K  ++PD +TYN L++GFC+ G + +   ++  M   G +PNV  YTTL+N
Sbjct: 297 GELVEEMRGKG-LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLIN 355

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK G L  A E+FD+M+   L+P+   YTTLI+ FC+ G ++EA ++L EM   G   
Sbjct: 356 CMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSP 415

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT+N ++ G C  G+++EA+G+L  +   G+  +  SY  V+   C++ EL KA ++ 
Sbjct: 416 SVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMK 475

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ +G LP   T + L+  LC      +A      ++  G  P+  ++  L+   C  
Sbjct: 476 EEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVD 535

Query: 498 RKLLFAFELLDELV 511
            +L  A  L DE+V
Sbjct: 536 GELSKALRLHDEMV 549



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 181/334 (54%), Gaps = 8/334 (2%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT-----LESAFEVLKEMKKSQMSYPNLI 239
           A   L  +N+H    P    +N ++    +R +      + A  V ++M ++ +S PN+ 
Sbjct: 151 ALTLLHLANRH-GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVS-PNVY 208

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY+ +I G+   G   + +    +M  K+ I P+ +TYN LID  C+  KV  A  ++  
Sbjct: 209 TYNVIIRGVVSQGDLEKGLGFMRKM-EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRA 267

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G   N+ +Y +++NG C +G++ E  E+ +EM+   L PD + Y TL+N FC+ G 
Sbjct: 268 MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGN 327

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           + + L LL EM  +G   ++VT+  ++  +C+ G +  A+ + +++   G+  N+ +Y  
Sbjct: 328 LHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTT 387

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  CQKG + +A ++L  M+  GF P   T N L+   C  G  ++A   L G+VE G
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERG 447

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P+  S++ ++   CR R+L  AF++ +E+V K
Sbjct: 448 LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEK 481



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 220/440 (50%), Gaps = 17/440 (3%)

Query: 85  VSEQKGFNHNNATYATILDKLAR-----YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           ++ + GF     +Y  +LD L R     ++ ++  + V R M       +   +  +++ 
Sbjct: 157 LANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRG 216

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN----QVDLAQNFLKYSNQH 195
             +    E+ L    K+     EK  +       N LI+++    +V  A   L+ +   
Sbjct: 217 VVSQGDLEKGLGFMRKM-----EKEGISPNVVTYNTLIDASCKKKKVKEAMALLR-AMAV 270

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             +  N   +N +I   C +G +    E+++EM+   +  P+ +TY+TL++G CK G   
Sbjct: 271 GGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL-VPDEVTYNTLVNGFCKEGNLH 329

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           + + L  EMV K  + P+ +TY  LI+  C+ G + RA +I + M+  G  PN   YTTL
Sbjct: 330 QGLVLLSEMVGKG-LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTL 388

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++GFC++G + EA +V  EM      P  + Y  L++ +C  GRV EA+ +L+ M ERG 
Sbjct: 389 IDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGL 448

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+V+++ ++ G CRE ++ +A  M E++   G+  +  +Y  ++   C + +L +A +
Sbjct: 449 PPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD 508

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L R M+ RG  P   T   L+   C  G    A      +V+ GF P++ ++++L+  + 
Sbjct: 509 LFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLN 568

Query: 496 RGRKLLFAFELLDELVIKES 515
           +  +   A  LL +L  +ES
Sbjct: 569 KKARTKVAKRLLLKLFYEES 588



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 164/295 (55%), Gaps = 2/295 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N L+   CK G L     +L EM    +S PN++TY+TLI+ +CK G    A
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLS-PNVVTYTTLINCMCKAGNLSRA 366

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +E+F++M  +  + P+  TY  LIDGFC+ G ++ A K++  M  +G +P+V  Y  L++
Sbjct: 367 VEIFDQMRVRG-LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C  G++QEA  +   M    L PD + Y+T+I  FCR   + +A ++ +EM E+G   
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLP 485

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT++ ++ GLC + K+ EA  +  ++   G+  ++ +Y  ++N  C  GEL KA+ L 
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLH 545

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             M+ RGFLP   T + L+  L K    + A   L  L      P+  ++  L+E
Sbjct: 546 DEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 164/394 (41%), Gaps = 54/394 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG + N  TY T+++ + +         +  QM     + +E  +  L+  F        
Sbjct: 341 KGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFC------- 393

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                        +K  +      L+ +I S                    P+   +N L
Sbjct: 394 -------------QKGLMNEAYKVLSEMIVSG-----------------FSPSVVTYNAL 423

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +  +C  G ++ A  +L+ M +  +  P++++YST+I G C+     +A ++ EEMV K 
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLP-PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LPD +TY+ LI G C   K+  A  +   M   G  P+   YT+L+N +C +G+L +A
Sbjct: 483 -VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKA 541

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL-- 386
             + DEM      PD + Y+ LIN   +  R   A  LL ++       D VT+N ++  
Sbjct: 542 LRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN 601

Query: 387 -------------GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
                         G C +G + EA  + + +       N A Y ++++   + G + KA
Sbjct: 602 CSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKA 661

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
             L   +    F  H      L+  L + GM ++
Sbjct: 662 YNLYMELEHSSFACHTVAVIALVKALAREGMNDE 695



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 17/263 (6%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  ++ LI+  C +  L  AF++ +EM +  +  P+ +TY++LI+  C +G   +A+ 
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLP-PDEVTYTSLINAYCVDGELSKALR 543

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM--- 316
           L +EMV +   LPD +TY+VLI+G  +  +   AK+++  +      P+   Y TL+   
Sbjct: 544 LHDEMVQRG-FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENC 602

Query: 317 ------------NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
                        GFC +G + EA  VF  M     KP+   Y  +I+   R G V +A 
Sbjct: 603 SNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAY 662

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L  E++        V    ++  L REG  +E   +L+ +       +    ++++  +
Sbjct: 663 NLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVN 722

Query: 425 CQKGELEKAIELLRLMLCRGFLP 447
            ++G ++  + +L  M   G LP
Sbjct: 723 FKEGNMDAVLNVLTEMAKDGLLP 745



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 17/194 (8%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID------------- 246
           P+   +++LI    K+   + A  +L ++   + S P+ +TY+TLI+             
Sbjct: 555 PDNVTYSVLINGLNKKARTKVAKRLLLKLFYEE-SVPDDVTYNTLIENCSNNEFKSVEGL 613

Query: 247 --GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
             G C  G   EA  +F+ M+ ++   P+A  YN++I G  RGG V +A  +   ++++ 
Sbjct: 614 VKGFCMKGLMNEADRVFKTMLQRNHK-PNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSS 672

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +      L+    +EG   E   +   +       D      L+    + G +D  L
Sbjct: 673 FACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVL 732

Query: 365 ELLKEMKERGCKAD 378
            +L EM + G   D
Sbjct: 733 NVLTEMAKDGLLPD 746



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 97/221 (43%), Gaps = 24/221 (10%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+GF  +N TY+ +++ L +  + +    +L ++ YE     +  +  L++   NCS +E
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE---NCSNNE 606

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
                F  +  + +          C+  L+  N+ D     +   N     KPN  I+N+
Sbjct: 607 -----FKSVEGLVK--------GFCMKGLM--NEADRVFKTMLQRNH----KPNAAIYNL 647

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I  H + G +  A+ +  E++ S  +  + +    L+  L + G   E   L + ++  
Sbjct: 648 MIHGHSRGGNVHKAYNLYMELEHSSFAC-HTVAVIALVKALAREGMNDELSRLLQNILRS 706

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
            + L DA    VL++   + G +D    ++  M  +G  P+
Sbjct: 707 CR-LNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 219/454 (48%), Gaps = 40/454 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I+  A I+ +  E + + A+E+FN +  ++G   N  +Y T+++ L +         V +
Sbjct: 164 ITFNALINGLCNEGKIKEAVELFNEMV-KRGHEPNVISYTTVINGLCKTGNTSMAVDVFK 222

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           +M    CK                                    P++   ST ++ L + 
Sbjct: 223 KMEQNGCK------------------------------------PNVVTYSTIIDSLCKD 246

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
             V+ A  FL    +   + PN   +N ++   C  G L  A  + KEM    +  PN +
Sbjct: 247 RLVNDAMEFLSEMVER-GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDV-MPNTV 304

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T++ L+DGLCK G   EA  +FE M  K  + PD  TYN L+DG+C    ++ AKK+ E 
Sbjct: 305 TFTILVDGLCKEGMVSEARLVFETMTEKG-VEPDISTYNALMDGYCLQRLMNEAKKVFEI 363

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC P   +Y  L+NG+CK  ++ EAK +  EM +  L PDT+ Y+TL+   C+ GR
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             EAL L KEM   G   ++VT+ I+L G C+ G ++EAL +L+ +    +  N   Y I
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++      G+LE A EL   +   G  P   T   ++  L K G++++A      + + G
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           F P S S+ ++++   + +    A  L+DE+V K
Sbjct: 544 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK 577



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 213/421 (50%), Gaps = 14/421 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  NN+    + D LA + +   ++   R    E  KF  G F    ++ +  SL  + 
Sbjct: 63  GFVSNNSNNVCVDDALASFYRMVRINP--RPSVVEFGKFL-GSFAKKKQYSTVVSLCNQ- 118

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           +++F   H       ++ +++  +N L   N VD + + L    + L + P+   FN LI
Sbjct: 119 MDLFRVTH-------NVYSLNILINCLCRLNHVDFSVSVLGKMFK-LGIHPDAITFNALI 170

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C  G ++ A E+  EM K     PN+I+Y+T+I+GLCK G    A+++F++M  ++ 
Sbjct: 171 NGLCNEGKIKEAVELFNEMVKRGHE-PNVISYTTVINGLCKTGNTSMAVDVFKKM-EQNG 228

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ +TY+ +ID  C+   V+ A + +  M   G  PNVF Y ++++GFC  G+L EA 
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +F EM    + P+T+ +T L++  C+ G V EA  + + M E+G + DI T+N ++ G 
Sbjct: 289 RLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C +  + EA  + E +   G      SY I++N  C+   +++A  LL  M  +   P  
Sbjct: 349 CLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T + L+  LC+ G  ++A      +   G  P   ++ +L++  C+   L  A +LL  
Sbjct: 409 VTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKS 468

Query: 510 L 510
           +
Sbjct: 469 M 469



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 165/315 (52%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   F   +    K+    +   +  +M   ++++ N+ + + LI+ LC+      ++
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTH-NVYSLNILINCLCRLNHVDFSV 148

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +  +M  K  I PDA+T+N LI+G C  GK+  A ++   M   G  PNV +YTT++NG
Sbjct: 149 SVLGKMF-KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVING 207

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK G    A +VF +M+    KP+ + Y+T+I+  C+   V++A+E L EM ERG   +
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPN 267

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + T+N I+ G C  G++ EA  + +++    +  N  ++ I+++  C++G + +A  +  
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFE 327

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  +G  P  +T N L+   C   +  +A      ++  G  P + S+ +L+   C+ R
Sbjct: 328 TMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSR 387

Query: 499 KLLFAFELLDELVIK 513
           ++  A  LL E+  K
Sbjct: 388 RMDEAKSLLAEMYHK 402



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 133/227 (58%), Gaps = 2/227 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +NILI  +CK   ++ A  +L EM    ++ P+ +TYSTL+ GLC+ GR +EA+ 
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALN-PDTVTYSTLMQGLCQLGRPKEALN 429

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+EM S     P+ +TY +L+DGFC+ G +D A K+++ MK     PN+ +YT L+ G 
Sbjct: 430 LFKEMCSYGP-HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGM 488

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
              GKL+ AKE+F ++     +PD   YT +I    + G  DEA +L ++M++ G   + 
Sbjct: 489 FIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNS 548

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
            ++N+++ G  +      A+ +++++      +N ++++++L+   Q
Sbjct: 549 CSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQ 595


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 184/314 (58%), Gaps = 5/314 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N ++  +C  G L++A  ++ EM       P+  TY+TLI GLC  GR   A+ 
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE----PDAYTYNTLIRGLCGRGRTANALA 179

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + +EM+ + + +PD +TY +L++  C+     +A K+++ M++ GC P++  Y  ++NG 
Sbjct: 180 VLDEMLRR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+EG++ +A E    + ++  +P+T+ Y  ++   C A R ++A EL+ EM ++GC  ++
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFN+++  LCR+G +E AL +LE++   G   N  SY  +L+  C++ +++KA+  L L
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   + N LL  LC++G  + A   L  L + G  P   S+  +++ + +  K
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418

Query: 500 LLFAFELLDELVIK 513
              A ELL+E+V K
Sbjct: 419 TKEALELLNEMVSK 432



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 199/375 (53%), Gaps = 10/375 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  L    +     AVL +M    C      +  L++     S +++ +++  ++
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219

Query: 157 HPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
               R+K   P +   +  +N + +  +VD A  FLK    +   +PNT  +NI++K  C
Sbjct: 220 ----RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY-GCEPNTVSYNIVLKGLC 274

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
                E A E++ EM +     PN++T++ LI  LC+ G    A+E+ E+ + K    P+
Sbjct: 275 TAERWEDAEELMGEMGQKGCP-PNVVTFNMLISFLCRKGLVEPALEVLEQ-IPKYGCTPN 332

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           +L+YN L+  FC+  K+D+A   ++ M + GC P++ +Y TL+   C+ G++  A E+  
Sbjct: 333 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 392

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           ++K+    P  I Y T+I+   +AG+  EALELL EM  +G + DI+T++ I  GLCRE 
Sbjct: 393 QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRED 452

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           +IE+A+    K+   GI  N   Y  ++   C++ E   AI+L   M+  G +P+ +T  
Sbjct: 453 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 512

Query: 454 ELLVRLCKAGMAEDA 468
            L+  L   G+ ++A
Sbjct: 513 ILIEGLAYEGLIKEA 527



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 184/327 (56%), Gaps = 4/327 (1%)

Query: 187 NFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           N L   ++ LR +  P+   + IL++  CKR   + A ++L EM+    + P+++TY+ +
Sbjct: 176 NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT-PDIVTYNVV 234

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           ++G+C+ GR  +AIE  + + S     P+ ++YN+++ G C   + + A+++M  M   G
Sbjct: 235 VNGICQEGRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 293

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C PNV  +  L++  C++G ++ A EV +++  +   P+++ Y  L++ FC+  ++D+A+
Sbjct: 294 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 353

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
             L  M  RGC  DIV++N +L  LCR G+++ A+ +L +L   G      SY  V++  
Sbjct: 354 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
            + G+ ++A+ELL  M+ +G  P   T + +   LC+    EDA  A   + +MG +P +
Sbjct: 414 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 473

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
             +  ++  +C+ R+   A +L   ++
Sbjct: 474 VLYNAIILGLCKRRETHSAIDLFAYMI 500



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 171/312 (54%), Gaps = 4/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+++   C+ G ++ A E LK +  S    PN ++Y+ ++ GLC   R+ +A E
Sbjct: 226 PDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEE 284

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  K    P+ +T+N+LI   CR G V+ A +++E +   GC PN  +Y  L++ F
Sbjct: 285 LMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 343

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ K+ +A    D M +    PD + Y TL+   CR+G VD A+ELL ++K++GC   +
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 403

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++ GL + GK +EAL +L ++   G+  +  +Y  +    C++  +E AI     
Sbjct: 404 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 463

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGR 498
           +   G  P+    N +++ LCK      +AI LF  ++  G  P   ++ +L+E +    
Sbjct: 464 VQDMGIRPNTVLYNAIILGLCKR-RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 522

Query: 499 KLLFAFELLDEL 510
            +  A +LLDEL
Sbjct: 523 LIKEARDLLDEL 534



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 39/259 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKK----------------------------- 230
           PN   FN+LI   C++G +E A EVL+++ K                             
Sbjct: 296 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 355

Query: 231 -----SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
                S+  YP++++Y+TL+  LC++G    A+EL  ++  K    P  ++YN +IDG  
Sbjct: 356 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG-CAPVLISYNTVIDGLT 414

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + GK   A +++  M + G  P++  Y+T+  G C+E ++++A   F ++++  ++P+T+
Sbjct: 415 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 474

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  +I   C+      A++L   M   GC  +  T+ I++ GL  EG I+EA  +L++L
Sbjct: 475 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534

Query: 406 WYDGIY----LNKASYRIV 420
              G+     +NK + R++
Sbjct: 535 CSRGVVRKSLINKGAIRLL 553



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 134/296 (45%), Gaps = 42/296 (14%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L + G   EA+ L           PDA T   LI      G+   A++++       C P
Sbjct: 75  LVRRGELDEALRLVGSARR-----PDAGTCAALIKKLSASGRTAEARRVLA-----ACGP 124

Query: 308 NVFNYTTLMNGFCKEGKLQEAKE--------------------------------VFDEM 335
           +V  Y  ++ G+C  G+L  A+                                 V DEM
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 184

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PD + YT L+   C+     +A++LL EM+++GC  DIVT+N+++ G+C+EG++
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 244

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           ++A+  L+ L   G   N  SY IVL   C     E A EL+  M  +G  P+  T N L
Sbjct: 245 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 304

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC+ G+ E A   L  + + G  P S S+  L+   C+ +K+  A   LD +V
Sbjct: 305 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 212/429 (49%), Gaps = 8/429 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   +  TY   +D L + ++ +    +L++M  + C      +  L+         +
Sbjct: 35  RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLD 94

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFN 206
             + +  ++       P+LK  +  ++ L ++ +V+ A+  F+       R  P+  ++ 
Sbjct: 95  EAMAVLEQMVE-KGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCR--PDAFVYT 151

Query: 207 ILIKHHCKRGTLESAFEVLKEM---KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            LIK  CK G  E A+ + KE    K    + P+++TY++LIDGLCK GR  EA ++F++
Sbjct: 152 ALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDD 211

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
              +   +PDA+TY  +IDG C+ G+V+   +    M+N G  P+   Y  L++GF K  
Sbjct: 212 EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 271

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            + +A  V+ +M        T+ Y  +++  C+AGRV EA      M+ERGC A +VT++
Sbjct: 272 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 331

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G C EG +  A+ +  ++   G   N  SY I++   C+ G+L KA      +L R
Sbjct: 332 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 391

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLF 502
              P   T N  L  LC+        + LF  +V  G  P   S+++L++ ICR   L  
Sbjct: 392 RLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEV 451

Query: 503 AFELLDELV 511
           A E+  E+V
Sbjct: 452 ALEIFREMV 460



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 151/288 (52%), Gaps = 8/288 (2%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+++ ++ +I+GLC+  R  EA  + E  V +    PD +TYNV IDG C+  +VD A +
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAV-RAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M    C P    YT L++G  K G+L EA  V ++M      P    YT +I+   
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE----KLWYDGIY 411
           +AGRV+EA  +  +M   GC+ D   +  ++ GLC+ GK EEA  + +    +  +    
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 412 LNKASYRIVLNFSCQKGELEKAIELL-RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
            +  +Y  +++  C+ G + +A ++     + RGF+P   T   ++  LCK G  E+   
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
               +   G++P++ ++A L++   + + +  A  +  +++  +SGT+
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML--QSGTV 289



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 162/327 (49%), Gaps = 16/327 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+  + ++GF  +  TY +I+D L +  + E       +M     +     +  L+
Sbjct: 205 ARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F          +M  K H + R+      + + +   I  + +  A    +     L 
Sbjct: 265 DGFMKA-------KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317

Query: 198 LKPNTCI-----FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           ++   C+     ++ L+   C  G + +A E+ + M       PNL++Y+ +I GLC+ G
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE-PNLVSYNIIIRGLCRAG 376

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFC-RGGKVDRAKKIMEFMKNNGCNPNVFN 311
           +  +A   FE+++ + ++ PD  T+N  + G C R   V    ++ E M + G +PN+ +
Sbjct: 377 KLAKAYFYFEKLLQR-RLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHS 435

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+ LM+G C+ G L+ A E+F EM +  + PD + + TLI   C AGRVDEALE+ +E+ 
Sbjct: 436 YSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL- 494

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEA 398
           ER    D  ++  +L GL R  ++EEA
Sbjct: 495 ERRSAPDAWSYWSLLDGLSRCERMEEA 521



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 115/216 (53%), Gaps = 6/216 (2%)

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C+P++  +T ++NG C+E +L EA  V +       +PD + Y   I+  C+A RVD+A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +LLK+M E+ C    VT+  ++ GL + G+++EA+ +LE++   G      +Y +V++  
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV-----EMG 479
            + G +E+A  +   ML  G  P       L+  LCK+G  E+ A AL+           
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEE-AYALYKEANARKHHAT 181

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
             P+  ++  L++ +C+  ++L A ++ D+  ++  
Sbjct: 182 AVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERG 217



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 20/295 (6%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH---FSNCSL 145
           +G+  +  TYA ++D   + K       V RQM         G  ++ + +         
Sbjct: 251 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM------LQSGTVVSTVTYNIILDGLCK 304

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLL----IESNQVDLAQNFLKYSNQHLRLKPN 201
             RV E +     +  E+  +  + T   L+     E N     + F +  ++    +PN
Sbjct: 305 AGRVAEAYATFLAM-EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC--EPN 361

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN-GRFREAIEL 260
              +NI+I+  C+ G L  A+   +++ + ++  P++ T++  + GLC+      + +EL
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC-PDVYTFNAFLHGLCQRLDTVSDGVEL 420

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           FE MVS+    P+  +Y++L+DG CR G ++ A +I   M + G  P+V  + TL+   C
Sbjct: 421 FESMVSQGTS-PNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLC 479

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
             G++ EA EVF E++     PD   Y +L++   R  R++EA  L   MK +GC
Sbjct: 480 IAGRVDEALEVFRELER-RSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGC 533



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 94/180 (52%)

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + +T +IN  CR  R+DEA  +L+     GC+ D VT+N+ + GLC+  ++++A  +
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L+K+          +Y  +++   + G L++A+ +L  M+ +G  P   T   ++  L K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           AG  E+A      ++  G +P++  +  L++ +C+  K   A+ L  E   ++     VP
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 14/233 (6%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E++G      TY+ ++D         A   + R+M    C+ +   +  +++        
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378

Query: 147 ERVLEMFHKIHPITREKPSLKAIST-----CLNLLIESNQVDLAQNFLKYSNQHLRLKPN 201
            +    F K+    R  P +   +      C  L   S+ V+L ++ +          PN
Sbjct: 379 AKAYFYFEKLLQ-RRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTS-----PN 432

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              ++IL+   C+ G LE A E+ +EM    ++ P+++ ++TLI  LC  GR  EA+E+F
Sbjct: 433 LHSYSILMDGICRAGGLEVALEIFREMVSRGVA-PDVVVFNTLIRWLCIAGRVDEALEVF 491

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            E+  +    PDA +Y  L+DG  R  +++ A+ +   MK  GC P  ++ T 
Sbjct: 492 RELERRSA--PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHYDLTV 542


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 232/453 (51%), Gaps = 14/453 (3%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           EP  A E+F  +   +  + +  TY T+LD L R  K E   A+ ++M     + H+ I 
Sbjct: 25  EPDRAQELFEHMKSVE-CSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR--RSHDVIS 81

Query: 134 LN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
            N L+         E  LE F K+    R  P++   S  ++ L ++N+V  A   L+ S
Sbjct: 82  FNILVTGLCRAGKIETALEFFRKMD--DRCSPNVITYSVLIDGLCKANRVSQAVELLE-S 138

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            +     P+   + IL+   CK   + +A+EVL+EM  +    PNL+TY++L+ GLC+  
Sbjct: 139 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG-CVPNLVTYNSLLHGLCRAR 197

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           R  +A+ L  +M  +    P+ +TY  LIDG C+ G+V  A  ++  M + G  P++  Y
Sbjct: 198 RVSDALALMRDMTCR-GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 256

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L+NG CK  ++ E+  +     +  +KPD + Y+++I   CR+ R+DEA  LL  +K 
Sbjct: 257 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 316

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           RGC  D++ ++ ++ GLC+ GK++EA  + E +  DG   +  +Y  +++  C+ G +++
Sbjct: 317 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDE 376

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  LL  M+  G  P   T N L+  LC     ++A   +  +      P + ++ +L+ 
Sbjct: 377 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 436

Query: 493 LICRGRK-----LLFAFELLDELVIKESGTIQV 520
            +CR  +     L +  E++D  VI +  T  +
Sbjct: 437 GMCRMERVDSAALDYFQEMIDNGVIPDHITYSI 469



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 199/344 (57%), Gaps = 5/344 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++   ++ ++ L ++N+ D AQ   ++  + +   P+   +N L+    + G LE A 
Sbjct: 7   EPNVVTYNSLIDGLCKNNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAM 65

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + +EM   +    ++I+++ L+ GLC+ G+   A+E F +M   D+  P+ +TY+VLID
Sbjct: 66  ALFQEMLDRRSH--DVISFNILVTGLCRAGKIETALEFFRKM--DDRCSPNVITYSVLID 121

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+  +V +A +++E MK  GC+P+V  YT L++G CKE K+  A EV  EM +    P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y +L++  CRA RV +AL L+++M  RGC  ++VT+  ++ GLC+ G++++A  ML
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +   G   +   Y +++N  C+  +++++I LLR  +  G  P   T + ++  LC++
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
              ++A   L  +   G  P+   ++ L++ +C+  K+  AF+L
Sbjct: 302 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 345



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 5/305 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY ++L  L R ++     A++R MT   C  +   +  L+         +    M 
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
             +       P L   +  +N L +++QVD +   L+ +     +KP+   ++ +I   C
Sbjct: 242 ADMID-KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG-GIKPDVVTYSSVIYGLC 299

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           +   L+ A  +L  +K S+   P++I YSTLIDGLCK G+  EA +L+E M + D    D
Sbjct: 300 RSNRLDEACRLLLYVK-SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM-TGDGCDAD 357

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TY+ LIDG C+ G+VD A  ++  M   G  P+   Y +L+ G C    L EA E+ +
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEA-LELLKEMKERGCKADIVTFNIILGGLCRE 392
           EM+     P  + Y  LI+  CR  RVD A L+  +EM + G   D +T++I+L GL + 
Sbjct: 418 EMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKS 477

Query: 393 GKIEE 397
             + E
Sbjct: 478 KDLHE 482



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 118/214 (55%), Gaps = 2/214 (0%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+++GC PNV  Y +L++G CK  +   A+E+F+ MK+    P  + Y TL++   R G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           ++ A+ L +EM +R    D+++FNI++ GLCR GKIE AL    K+  D    N  +Y +
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSV 118

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+   + +A+ELL  M  RG  P   T   L+  LCK      A   L  +++ G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P   ++  L+  +CR R++  A  L+ ++  +
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 212



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 9/198 (4%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY++++  L R  + +    +L  +    C     ++  L+          +V
Sbjct: 283 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG---KV 339

Query: 150 LEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E F     +T +      +  ST ++ L ++ +VD A   L    + +   P+T  +N 
Sbjct: 340 DEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVR-MGTPPSTMTYNS 398

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE-AIELFEEMVS 266
           LIK  C    L+ A E+++EM++S  + P+ +TY+ LI G+C+  R    A++ F+EM+ 
Sbjct: 399 LIKGLCDLNHLDEAIELVEEMERSNCA-PSAVTYNILIHGMCRMERVDSAALDYFQEMID 457

Query: 267 KDQILPDALTYNVLIDGF 284
            + ++PD +TY++L++G 
Sbjct: 458 -NGVIPDHITYSILLEGL 474


>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
 gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 227/432 (52%), Gaps = 7/432 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           +S    +S+I  ++    AL+IF+   +  + F HN  TY  +++KL++ + FE ++ ++
Sbjct: 99  LSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLI 158

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
            Q+     K  E +F+ +++++      +  +  F +I P    +PS+++ +T LN L++
Sbjct: 159 SQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRI-PSFGLQPSVRSFNTLLNTLVQ 217

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
           + + DL     K   +   + PN    NIL+K  CK+  +++A  VL+EM    M + PN
Sbjct: 218 NKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEM--PAMGFIPN 275

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++TY+T++ G    G    A  +F E++ +  + PD  TY +L+DG+C+ G+   A K+M
Sbjct: 276 VVTYTTILGGYVSKGDMVGARRVFGEILDRGWV-PDPTTYTILMDGYCKKGRFMDAVKVM 334

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M+ N   PN   Y  ++  +CKE K  E   + D+M      P +     +I+  C  
Sbjct: 335 DEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEE 394

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G+V+ A EL K++ ++ C  D    + ++  LC+EGK+ EA  + ++ +  G   +  +Y
Sbjct: 395 GKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FEKGSIPSTLTY 453

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++   C+ GEL +A  L   M+ +G +P+  T N L+   CK G A +    +  +++
Sbjct: 454 NALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLD 513

Query: 478 MGFKPESDSWAL 489
            G  P   ++A+
Sbjct: 514 NGCLPNKATYAI 525



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 151/278 (54%), Gaps = 1/278 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++ +++TL++ L +N RF     +F+    K  I+P+  T N+L+   C+   +D A +
Sbjct: 203 PSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIR 262

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++E M   G  PNV  YTT++ G+  +G +  A+ VF E+ +    PD   YT L++ +C
Sbjct: 263 VLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYC 322

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + GR  +A++++ EM+E   + + VT+ +I+   C+E K  E L +L+ +       + A
Sbjct: 323 KKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSA 382

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
               V++  C++G++E A EL + +L +   P  A ++ L+  LCK G   +A   LF  
Sbjct: 383 LCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEAR-KLFDE 441

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            E G  P + ++  L+  +C G +L  A  L D +V K
Sbjct: 442 FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEK 479



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 96/197 (48%), Gaps = 4/197 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P++ +   +I   C+ G +E A E+ K++ K   +  N IT STLI  LCK G+  EA +
Sbjct: 379 PSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAIT-STLIHWLCKEGKVWEARK 437

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+E   +   +P  LTYN LI G C GG++  A ++ + M   GC PN F Y  L+ GF
Sbjct: 438 LFDEF--EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGF 495

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G  +E   V +EM +    P+   Y  L+      G   E   +L     RG   D 
Sbjct: 496 CKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSMASSRG-GVDA 554

Query: 380 VTFNIILGGLCREGKIE 396
             + + L      G I+
Sbjct: 555 ECWGVFLAKFVNGGNID 571



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 3/211 (1%)

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C  N+F   T++  +   G+ + A   F  + +F L+P    + TL+N   +  R D   
Sbjct: 168 CGENLF--ITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVH 225

Query: 365 ELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            + K  +++ G   ++ T NI++  LC++  I+ A+ +LE++   G   N  +Y  +L  
Sbjct: 226 LMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGG 285

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
              KG++  A  +   +L RG++P   T   L+   CK G   DA   +  + E   +P 
Sbjct: 286 YVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPN 345

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKE 514
             ++ +++E  C+ +K      LLD+++ K+
Sbjct: 346 DVTYGVIIEAYCKEKKSGEVLNLLDDMLEKK 376


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 174/298 (58%), Gaps = 2/298 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN  ++N +I   CK   +  AF++  EM    +S P+++TYS LI G C  G+ ++A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGIS-PDVVTYSALISGFCILGKLKDA 279

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           I+LF +M+ ++ I PD  T+N+L++ FC+ GK+   K + + M   G  PN   Y +LM+
Sbjct: 280 IDLFNKMILEN-IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMD 338

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C   ++ +AK +F+ M    + PD   Y+ +IN FC+  + DEA+ L KEM  +    
Sbjct: 339 GYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP 398

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT++ ++ GL + G+I  AL +++++   G+  N  +Y  +L+  C+  +++KAI LL
Sbjct: 399 DVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL 458

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
                +GF P  +T + L+  LC++G  EDA      L+  G+  +  ++ ++++  C
Sbjct: 459 TKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFC 516



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 174/309 (56%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI   CK G   +A ++L+ +    +  PN++ Y+T+ID +CK     EA +LF EM
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVD-GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSK  I PD +TY+ LI GFC  GK+  A  +   M      P+V+ +  L+N FCK+GK
Sbjct: 252 VSKG-ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++E K VFD M    +KP+ + Y +L++ +C    V++A  +   M + G   DI +++I
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+  K +EA+ + +++    I  +  +Y  +++   + G +  A++L+  M  RG
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+  T N +L  LCK    + A   L    + GF+P+  ++++L++ +C+  KL  A 
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490

Query: 505 ELLDELVIK 513
           ++ ++L++K
Sbjct: 491 KVFEDLLVK 499



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 197/388 (50%), Gaps = 6/388 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           IS+G  I  +    E + AL++   V +      N   Y TI+D + + K       +  
Sbjct: 191 ISYGTLIHGLCKVGETRAALDLLQRV-DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFS 249

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           +M  +        +  L+  F      +  +++F+K+  +   KP +   +  +N   + 
Sbjct: 250 EMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM-ILENIKPDVYTFNILVNAFCKD 308

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            ++   +       +   +KPN   +N L+  +C    +  A  +   M +  ++ P++ 
Sbjct: 309 GKMKEGKTVFDMMMKQ-GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN-PDIQ 366

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           +YS +I+G CK  +F EA+ LF+EM  K+ I+PD +TY+ LIDG  + G++  A ++++ 
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKN-IIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M + G  PN+  Y ++++  CK  ++ +A  +  + K+   +PD   Y+ LI   C++G+
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A ++ +++  +G   D+  + I++ G C EG   EAL +L K+  +G   +  +Y I
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLP 447
           ++    +K E + A +LLR M+ RG LP
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARG-LP 572



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 164/314 (52%), Gaps = 4/314 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           +KPN    NILI   C+ G +  AF V  ++ K  M Y P+ IT++TL  GLC  G+ ++
Sbjct: 116 IKPNLVNCNILINCFCQLGLIPFAFSVFAKILK--MGYVPDTITFTTLSKGLCLKGQIQQ 173

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  LF + V       D ++Y  LI G C+ G+   A  +++ +  N   PNV  Y T++
Sbjct: 174 AF-LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTII 232

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +  CK   + EA ++F EM +  + PD + Y+ LI+ FC  G++ +A++L  +M     K
Sbjct: 233 DSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIK 292

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+ TFNI++   C++GK++E   + + +   GI  N  +Y  +++  C   E+ KA  +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M   G  P   + + ++   CK    ++A      +      P+  +++ L++ + +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412

Query: 497 GRKLLFAFELLDEL 510
             ++ +A +L+D++
Sbjct: 413 SGRISYALQLVDQM 426



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 171/348 (49%), Gaps = 29/348 (8%)

Query: 187 NFLKYSNQHLRLKPN------TCIFNILIKHHCKRGTLESAFE---VLKEMKKSQMSY-- 235
           NF+ YS+       N        +FN L++    R T   AFE   +L  + KS+  +  
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLR----RNTTPPAFEFNKILGSLVKSKHYHTV 104

Query: 236 -------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
                        PNL+  + LI+  C+ G    A  +F +++ K   +PD +T+  L  
Sbjct: 105 LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL-KMGYVPDTITFTTLSK 163

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C  G++ +A    + +   G + +  +Y TL++G CK G+ + A ++   +   L++P
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y T+I+  C+   V+EA +L  EM  +G   D+VT++ ++ G C  GK+++A+ + 
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            K+  + I  +  ++ I++N  C+ G++++   +  +M+ +G  P++ T N L+   C  
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                A      + + G  P+  S+++++   C+ +K   A  L  E+
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 171/339 (50%), Gaps = 12/339 (3%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFL 134
           E F+  SE   KG + +  TY+ ++       K +    +  +M  E  K   +   I +
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           N           + V +M  K       KP+    ++ ++      +V+ A++      Q
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMK----QGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + P+   ++I+I   CK    + A  + KEM +  +  P+++TYS+LIDGL K+GR 
Sbjct: 359 G-GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI-IPDVVTYSSLIDGLSKSGRI 416

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A++L ++M  +  + P+  TYN ++D  C+  +VD+A  ++   K+ G  P++  Y+ 
Sbjct: 417 SYALQLVDQMHDRG-VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+ G C+ GKL++A++VF+++       D   YT +I  FC  G  +EAL LL +M++ G
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           C  D  T+ II+  L ++ + + A  +L ++   G+ LN
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 111/239 (46%)

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           ++Y+     F     VD A  +   +      P  F +  ++    K         +  +
Sbjct: 51  ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M+   +KP+ +    LINCFC+ G +  A  +  ++ + G   D +TF  +  GLC +G+
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           I++A    +K+   G + ++ SY  +++  C+ GE   A++LL+ +      P+    N 
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++  +CK  +  +A      +V  G  P+  +++ L+   C   KL  A +L ++++++
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE 289



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 127/257 (49%), Gaps = 7/257 (2%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           +  F+++ + +      KE   A  IFNT++ Q G N +  +Y+ +++   + KKF+   
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA-QGGVNPDIQSYSIMINGFCKIKKFDEAM 385

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            + ++M  +        + +L+   S        L++  ++H      P++   ++ L+ 
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD-RGVPPNICTYNSILDA 444

Query: 176 LIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
           L +++QVD A   L K+ ++  +  P+   ++ILIK  C+ G LE A +V +++     +
Sbjct: 445 LCKTHQVDKAIALLTKFKDKGFQ--PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYN 502

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
             ++  Y+ +I G C  G F EA+ L  +M   +  +PDA TY ++I    +  + D A+
Sbjct: 503 L-DVYAYTIMIQGFCVEGLFNEALALLSKM-EDNGCIPDAKTYEIIILSLFKKDENDMAE 560

Query: 295 KIMEFMKNNGCNPNVFN 311
           K++  M   G   N ++
Sbjct: 561 KLLREMIARGLPLNFYD 577



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 75/170 (44%)

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           K + I Y++    F     VD+A+ L   +  R        FN ILG L +       L 
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           + +K+ + GI  N  +  I++N  CQ G +  A  +   +L  G++P   T   L   LC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G  + A +    +V +GF  +  S+  L+  +C+  +   A +LL  +
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 95/216 (43%), Gaps = 2/216 (0%)

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
           F+  +    N  +Y++    F     + +A  +F+ +      P    +  ++    ++ 
Sbjct: 40  FIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSK 99

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
                L L ++M+ RG K ++V  NI++   C+ G I  A  +  K+   G   +  ++ 
Sbjct: 100 HYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFT 159

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +    C KG++++A      ++  GF     +   L+  LCK G    AA+ L   V+ 
Sbjct: 160 TLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR-AALDLLQRVDG 218

Query: 479 GF-KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              +P    +  +++ +C+ + +  AF+L  E+V K
Sbjct: 219 NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK 254


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 219/418 (52%), Gaps = 11/418 (2%)

Query: 98  YATILDKLARYKKFEAVDAVLR--QMTYETCKFHEGI--FLNLMKHFS-NCSLHERVLEM 152
           Y T+L  L++  +FE ++ VL   Q  ++   +H     F  L+K       +H+ +L  
Sbjct: 92  YHTVL-SLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALL-- 148

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
           FH        +       T ++ L +  +   A + L+  + +L ++PN  +++ +I   
Sbjct: 149 FHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNL-VQPNVVMYSTIIDGM 207

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK   +  AF++  EM    +S PN++TYS LI G    G+ ++AI+LF +M+ ++ I P
Sbjct: 208 CKDKHVNDAFDLYSEMVSKGIS-PNVVTYSALISGFFTVGQLKDAIDLFNKMILEN-IKP 265

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D  T+N+L+DGFC+ GK+   K +   M   G  PNV  Y +LM+G+C   ++ +AK + 
Sbjct: 266 DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSIL 325

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
             M    + PD   Y  LI+ FC+  +VDEA+ L KEM  +    D+VT+N ++ GLC+ 
Sbjct: 326 YTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKL 385

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           GKI  AL +++++   G+  +  +Y  +L+  C+  +++KAI LL  +  +G  P+  T 
Sbjct: 386 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTY 445

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             L+  LCK G  EDA      L+  G+    +++ +++   C       A  LL ++
Sbjct: 446 TILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 503



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 215/417 (51%), Gaps = 25/417 (5%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  IL  L + K +  V ++ +QM +E      GI                VL  F   H
Sbjct: 79  FNKILGSLVKSKHYHTVLSLSQQMEFE------GI--------------NPVLFHFQHPH 118

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRG 216
            +    P+    +T +  L    Q+   Q  L + N   +  + +   +  LI   CK G
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQI--HQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVG 176

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
              +A ++L+ +    +  PN++ YST+IDG+CK+    +A +L+ EMVSK  I P+ +T
Sbjct: 177 ETRAALDLLRRVD-GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG-ISPNVVT 234

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y+ LI GF   G++  A  +   M      P+V+ +  L++GFCK+GK++E K VF  M 
Sbjct: 235 YSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMM 294

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              +KP+ + Y +L++ +C    V++A  +L  M +RG   DI ++NI++ G C+  K++
Sbjct: 295 KQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVD 354

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA+ + +++ +  I  +  +Y  +++  C+ G++  A++L+  M  RG  P   T + +L
Sbjct: 355 EAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 414

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             LCK    + A   L  L + G +P   ++ +L++ +C+G +L  A  + ++L++K
Sbjct: 415 DALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVK 471



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 145/249 (58%), Gaps = 3/249 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KPN   +  L+  +C    +  A  +L  M +  ++ P++ +Y+ LIDG CK  +  EA
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVN-PDIQSYNILIDGFCKIKKVDEA 356

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF+EM  K  I+PD +TYN LIDG C+ GK+  A K+++ M + G  P++  Y+++++
Sbjct: 357 MNLFKEMHHK-HIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILD 415

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK  ++ +A  +  ++K+  ++P+   YT LI+  C+ GR+++A  + +++  +G   
Sbjct: 416 ALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNI 475

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            + T+ +++ G C +G  +EAL +L K+  +    +  +Y I++     K E +KA E L
Sbjct: 476 TVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA-EKL 534

Query: 438 RLMLCRGFL 446
           R M+ RG L
Sbjct: 535 REMITRGLL 543



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/240 (19%), Positives = 100/240 (41%), Gaps = 24/240 (10%)

Query: 298 EFMKNNGCN--P------NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +F+KN   N  P      N   Y+++   F     + +A  +F  +      P  I +  
Sbjct: 22  QFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNK 81

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKA----------------DIVTFNIILGGLCREG 393
           ++    ++      L L ++M+  G                   + +TF  ++ GLC +G
Sbjct: 82  ILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKG 141

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           +I +AL   + +   G  L++  Y  +++  C+ GE   A++LLR +      P+    +
Sbjct: 142 QIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYS 201

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            ++  +CK     DA      +V  G  P   +++ L+       +L  A +L ++++++
Sbjct: 202 TIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILE 261


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 194/350 (55%), Gaps = 3/350 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS  A ++ ++ L  +N  D A+      N+     P+   +N++I   CKRG LE A +
Sbjct: 43  PSTVAYTSLIHGLCMANSFDDARELFADMNRR-GCPPSPVTYNVIIDASCKRGMLEEACD 101

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++K+M +     P+++TY+T++DGLCK+GR  EA+ LF EM  +    P+  ++N +I G
Sbjct: 102 LIKKMIEDG-HVPDVVTYNTVMDGLCKSGRVEEALLLFNEM-ERLGCTPNRRSHNTIILG 159

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  K+D+A ++   M+     P+ ++Y  L++G  K GKL EA ++F  M +  + P 
Sbjct: 160 LCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS 219

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  +I+  C A  +DEALEL K M+ +GC+    TFNI++   C+ GK++EA  +L+
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLK 279

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  DG   +  +Y  +++  C    ++ A  LL  M+ R   P   T N L+  LCKAG
Sbjct: 280 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 339

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++A   L  +V  G  P+  ++  LV   CR  +   A ELL ++V +
Sbjct: 340 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 196/386 (50%), Gaps = 14/386 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC----KFHEGIFLNLMKHFSNC 143
           + G   +  TY T++D L +  + E    +  +M    C    + H  I L L +     
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ---- 163

Query: 144 SLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
           S  ++  ++FH++    R+  P   +    ++ L ++ +++ A    +       + P+ 
Sbjct: 164 SKIDQACQVFHEME--ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS-GITPSA 220

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N++I   C   TL+ A E+ K M+ S+   P+  T++ LID  CK G+  EA  L +
Sbjct: 221 VTYNVVIHGMCLAYTLDEALELFKSMR-SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLK 279

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            M + D  +PD +TY+ LI G C   +VD A+ ++E M    C P V    TL++G CK 
Sbjct: 280 RM-TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKA 338

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G+++EA+EV D M +    PD + Y TL++  CRAG+ + A ELL +M  RG   ++VT+
Sbjct: 339 GRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTY 398

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
             ++ GLC+  ++ EA G+  ++   G   N  +Y  ++   C  G+++  ++L   M+C
Sbjct: 399 TALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC 458

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDA 468
            G  P +     L   LCK+G +  A
Sbjct: 459 AGISPDHVVYGTLAAELCKSGRSARA 484



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 191/369 (51%), Gaps = 11/369 (2%)

Query: 143 CSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
           C L ++++E  H         P +   +T ++ L +S +V+ A   L    + L   PN 
Sbjct: 100 CDLIKKMIEDGHV--------PDVVTYNTVMDGLCKSGRVEEAL-LLFNEMERLGCTPNR 150

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
              N +I   C++  ++ A +V  EM+   +  P+  +Y  LIDGL K G+  EA +LF 
Sbjct: 151 RSHNTIILGLCQQSKIDQACQVFHEMEARDIP-PDSWSYGILIDGLAKAGKLNEAYKLFR 209

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            M+    I P A+TYNV+I G C    +D A ++ + M++ GC P+ F +  L++  CK 
Sbjct: 210 RMLDSG-ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKR 268

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK+ EA  +   M +    PD + Y+TLI+  C   RVD+A  LL++M +R CK  +VT 
Sbjct: 269 GKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 328

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++ GLC+ G+I+EA  +L+ +   G   +  +Y  +++  C+ G+ E+A ELL  M+ 
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 388

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           RG  P+  T   L+  LCKA    +A      +   G  P   ++  L+   C   ++  
Sbjct: 389 RGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDG 448

Query: 503 AFELLDELV 511
             +L  E+V
Sbjct: 449 GLKLFGEMV 457



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 220/434 (50%), Gaps = 9/434 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F  ++ ++G   +  TY  I+D   +    E    ++++M  +        +  +M
Sbjct: 64  ARELFADMN-RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHL 196
                    E  L +F+++  +    P+ ++ +T +  L + +++D A Q F  +  +  
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQSKIDQACQVF--HEMEAR 179

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P++  + ILI    K G L  A+++ + M  S ++ P+ +TY+ +I G+C      E
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGIT-PSAVTYNVVIHGMCLAYTLDE 238

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ELF+ M SK    P   T+N+LID  C+ GK+D A ++++ M ++G  P+V  Y+TL+
Sbjct: 239 ALELFKSMRSKG-CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G C   ++ +A+ + ++M     KP  +   TLI+  C+AGR+ EA E+L  M   G  
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+VT+N ++ G CR G+ E A  +L  +   G+  N  +Y  +++  C+   L +A  +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELIC 495
              M   G  P+  T   L++  C AG   D  + LFG +V  G  P+   +  L   +C
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQV-DGGLKLFGEMVCAGISPDHVVYGTLAAELC 476

Query: 496 RGRKLLFAFELLDE 509
           +  +   A E+L E
Sbjct: 477 KSGRSARALEILRE 490



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 214/470 (45%), Gaps = 60/470 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +FN + E+ G   N  ++ TI+  L +  K +    V  +M           +  L+
Sbjct: 134 ALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
              +         ++F ++    IT   PS    +  ++ +  +  +D A    K S + 
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGIT---PSAVTYNVVIHGMCLAYTLDEALELFK-SMRS 248

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC------ 249
              +P+   FNILI  HCKRG ++ AF +LK M       P+++TYSTLI GLC      
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG-HVPDVVTYSTLISGLCSIARVD 307

Query: 250 -----------------------------KNGRFREAIELFEEMVSKDQILPDALTYNVL 280
                                        K GR +EA E+ + MVS  Q  PD +TYN L
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS-PDVVTYNTL 366

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           + G CR G+ +RA++++  M   G  PNV  YT L++G CK  +L EA  VF +MK+   
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P+   YT LI  FC AG+VD  L+L  EM   G   D V +  +   LC+ G+   AL 
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 486

Query: 401 ML--------EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           +L         + W D +Y      R  ++     G++E A+  +R M+  G LP     
Sbjct: 487 ILREGRESLRSEAWGDEVY------RFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERC 540

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEM--GFKPESDSWALLVELICRGRKL 500
             L+  LCK+G   +A   L  ++++  G K    +   + E++ +G ++
Sbjct: 541 ASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVEEMVGKGYEI 590



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 177/317 (55%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P++  + ILI    K G L  A ++ +++  S ++ P+ + Y++LI GLC    F +A
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVT-PSTVAYTSLIHGLCMANSFDDA 64

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF +M ++    P  +TYNV+ID  C+ G ++ A  +++ M  +G  P+V  Y T+M+
Sbjct: 65  RELFADM-NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G+++EA  +F+EM+     P+   + T+I   C+  ++D+A ++  EM+ R    
Sbjct: 124 GLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  ++ I++ GL + GK+ EA  +  ++   GI  +  +Y +V++  C    L++A+EL 
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M  +G  P   T N L+   CK G  ++A   L  + + G  P+  +++ L+  +C  
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 498 RKLLFAFELLDELVIKE 514
            ++  A  LL+++V ++
Sbjct: 304 ARVDDARHLLEDMVKRQ 320



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 116/212 (54%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M     +P+ ++Y  L++G  K GKL +A+++F ++ +  + P T+ YT+LI+  C A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            D+A EL  +M  RGC    VT+N+I+   C+ G +EEA  +++K+  DG   +  +Y  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V++  C+ G +E+A+ L   M   G  P+  + N +++ LC+    + A      +    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
             P+S S+ +L++ + +  KL  A++L   ++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRML 212


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 233/486 (47%), Gaps = 57/486 (11%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE---- 130
           P  +L  F  VS+Q+ F  N  +Y  ++  L+R + ++   A L Q+  + CKF +    
Sbjct: 82  PTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV-DLCKFKDRGNV 140

Query: 131 ----------------GIFLNLMKHFSNCSLHERVLEMF--------------------- 153
                            +F  ++K +    L +  L +F                     
Sbjct: 141 IWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNN 200

Query: 154 -------HKIHPITREK------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
                  H  H + ++       P +  +S  +N   +  +VD A  F+K   ++L ++P
Sbjct: 201 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK-KMENLGVEP 259

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   ++ LI  +   G +E+A  VLK M +  +S  N++TY+ LI G CK  +  EA ++
Sbjct: 260 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR-NVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
              M  +  ++PD   Y VLIDG+CR GK+D A ++++ M   G   N+F   +L+NG+C
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 378

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G++ EA+ V   M ++ LKPD+  Y TL++ +CR G   EA  L  +M + G +  ++
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N +L GLCR G  ++AL +   +   G+  ++  Y  +L+   +    E A  L + +
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L RGF     T N ++  LCK G   +A      + ++G  P+  ++  L++  C+   +
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 501 LFAFEL 506
             AF++
Sbjct: 559 GQAFKV 564



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 48/439 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-SNCSL 145
           E  G   N  TY ++++        EA   VL+ M+ +    +   +  L+K +   C +
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 312

Query: 146 HE--RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPN 201
            E  +VL    +   +    P  +A    ++    + ++D A   L   ++ LRL  K N
Sbjct: 313 DEAEKVLRGMQEEAALV---PDERAYGVLIDGYCRTGKIDDAVRLL---DEMLRLGLKTN 366

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
             I N LI  +CKRG +  A  V+  M    +  P+  +Y+TL+DG C+ G   EA  L 
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLK-PDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF-- 319
           ++M+ ++ I P  LTYN L+ G CR G  D A +I   M   G  P+   Y+TL++G   
Sbjct: 426 DKML-QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFK 484

Query: 320 ---------------------------------CKEGKLQEAKEVFDEMKNFLLKPDTIG 346
                                            CK GK+ EA+E+FD+MK+    PD I 
Sbjct: 485 MENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGIT 544

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y TLI+ +C+A  V +A ++   M+       I  +N ++ GL +  ++ E   +L ++ 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMG 604

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+  N  +Y  +++  C++G L+KA      M   G   +    + ++  L + G  +
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 467 DAAIALFGLVEMGFKPESD 485
           +A + +  +V+ GF P+ +
Sbjct: 665 EANLLMQKMVDHGFFPDHE 683



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 187/390 (47%), Gaps = 40/390 (10%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  +  T+ T++  L +  K    + +  +M    C      +  L+  +   S    
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS---N 557

Query: 149 VLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIF 205
           V + F     + RE   PS++  ++ ++ L +S ++    + L  +   +R L PN   +
Sbjct: 558 VGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLL--TEMGIRGLTPNIVTY 615

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   CK G L+ AF    EM ++ +S  N+I  ST++ GL + GR  EA  L ++MV
Sbjct: 616 GALIDGWCKEGMLDKAFSSYFEMTENGLS-ANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 266 S-------------------------------KDQILPDALTYNVLIDGFCRGGKVDRAK 294
                                           K  +LP+ + YN+ I G C+ GKVD A+
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +    +   G  P+ F Y TL++G+   G + EA  + DEM    L P+ + Y  LIN  
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C++  VD A  L  ++ ++G   ++VT+N ++ G C+ G ++ A  + +K+  +GI  + 
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            +Y  ++N  C+ G++E++++LL  M+  G
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAG 884



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 199/467 (42%), Gaps = 40/467 (8%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E FN   +  Q+G      TY T+L  L R   F+    +   M        E  +  L+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLL 479

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    E    ++  I      K  +   +    L      V+  + F K  +  L 
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD--LG 537

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +  LI  +CK   +  AF+V   M++  +S P++  Y++LI GL K+ R  E 
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXIS-PSIEMYNSLISGLFKSRRLVEX 596

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L  EM  +  + P+ +TY  LIDG+C+ G +D+A      M  NG + N+   +T+++
Sbjct: 597 TDLLTEMGIRG-LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 655

Query: 318 GFCKEGKLQEAKEVFDEM---------------------------------KNFLLKPDT 344
           G  + G++ EA  +  +M                                 K FLL P+ 
Sbjct: 656 GLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL-PNN 714

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I Y   I   C+ G+VD+A      +  +G   D  T+  ++ G    G ++EA  + ++
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+  N  +Y  ++N  C+   +++A  L   +  +G  P+  T N L+   CK G 
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + A      ++E G  P   +++ L+  +C+   +  + +LL++++
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 143/266 (53%), Gaps = 7/266 (2%)

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           GL KN     A+ +F+ M  K   +P   + N L++   + G+   A  + + M   G  
Sbjct: 170 GLTKN-----ALYVFDNM-GKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIV 223

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+VF  + ++N FCK+GK+ EA     +M+N  ++P+ + Y +LIN +   G V+ A  +
Sbjct: 224 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 283

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL-NKASYRIVLNFSC 425
           LK M E+G   ++VT+ +++ G C++ K++EA  +L  +  +   + ++ +Y ++++  C
Sbjct: 284 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 343

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G+++ A+ LL  ML  G   +    N L+   CK G   +A   +  +V+   KP+S 
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 403

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           S+  L++  CR      AF L D+++
Sbjct: 404 SYNTLLDGYCREGHTSEAFNLCDKML 429



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 3/193 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN  ++NI I   CK G ++ A      M   +   P+  TY TLI G    G   EA
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFF-SMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 768

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM+ +  ++P+ +TYN LI+G C+   VDRA+++   +   G  PNV  Y TL++
Sbjct: 769 FRLRDEMLRRG-LVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK G +  A ++ D+M    + P  + Y+ LIN  C+ G ++ +++LL +M + G  +
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887

Query: 378 DIVTF-NIILGGL 389
            ++ +  ++ GG 
Sbjct: 888 KLIEYCTLVQGGF 900



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 4/147 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N LI   CK   ++ A  +  ++ +  + +PN++TY+TLIDG CK G    A
Sbjct: 780 LVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL-FPNVVTYNTLIDGYCKIGNMDAA 838

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L ++M+ ++ I P  +TY+ LI+G C+ G ++R+ K++  M   G +  +  Y TL+ 
Sbjct: 839 FKLKDKMI-EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 318 GFCKEGKLQEAK--EVFDEMKNFLLKP 342
           G  K     E    E   +  N  L P
Sbjct: 898 GGFKTSNYNEMSKPEALKQNMNCFLLP 924


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 227/442 (51%), Gaps = 7/442 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+   ++E KG N + ATY  I+D+L R  K +  D +  +M    C  +   +  L+
Sbjct: 29  ALEMVEEMTE-KGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALI 87

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    ER  ++  ++     E P     +T L+ L    +V  A+ F   S     
Sbjct: 88  NGLCKDENIERAYKLLEEMASKGYE-PDNITYNTILSGLCRMGKVSEAKQFFD-SMPSRG 145

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
             P+   +N L+    K G +  A+ + K M  +     P+LITY+TLIDG C+  +  E
Sbjct: 146 YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDE 205

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A++LF+++++K   +PD +TYN ++ G  R   +D A+++ + M ++GC PN   Y+ ++
Sbjct: 206 AMKLFKDVIAK-GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G C+ G +    E+++EM      PD +    +I+  C+A +VD+A ++L+EM + G  
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+VT+NI+L GLC+   +++A  +   +  +G   +  SY +VLN  C+  ++  A  L
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 384

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M+ R  +P   T N L+  LCKAG  ++A   L  + E    P+  +   L+  +CR
Sbjct: 385 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCR 444

Query: 497 GRKLLFAFELLDELVIKESGTI 518
            ++   A  L   +V  E GT+
Sbjct: 445 DKRTDEAVRLFQYMV--EKGTV 464



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 184/350 (52%), Gaps = 37/350 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +P+   ++ +I   CK G +  A E+++EM +  ++ P++ TY+ ++D LC+ G+  EA
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVN-PDVATYTIIVDRLCRAGKVDEA 64

Query: 258 IELFEEMVS------------------KDQIL----------------PDALTYNVLIDG 283
            ELF +M+                   KD+ +                PD +TYN ++ G
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD--EMKNFLLK 341
            CR GKV  AK+  + M + G +P+V  Y  L++   KEGK+ EA  +F   +M +  + 
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD I Y TLI+ FCR  + DEA++L K++  +G   D VT+N IL GL R+  ++EA  M
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            +K+   G   N A+Y IVL+  C+ G + + +EL   M  + F P     N ++  LCK
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           A   +DA   L  + ++G  P+  ++ +L++ +C+   +  A EL   +V
Sbjct: 305 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 210/418 (50%), Gaps = 9/418 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLN 135
           A + F+++   +G++ +   Y  +LD L +  K      + + M     K    +  +  
Sbjct: 134 AKQFFDSMP-SRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNT 192

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+  F      +  +++F  +        ++   S  L L  +SN  +  + F K  +  
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG 252

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               PN   ++I++  HC+ G +    E+ +EM + + S P+++  + +ID LCK  +  
Sbjct: 253 C--APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS-PDVLLCNAVIDMLCKAKKVD 309

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A ++ EEM SK   +PD +TYN+L+DG C+   VD+A ++   M +NGC P++ +Y+ +
Sbjct: 310 DAHKVLEEM-SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 368

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK  K+ +A+ +FD M    L PD + +  L++  C+AG++DEA +LL  M E   
Sbjct: 369 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNV 428

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D VT   ++ GLCR+ + +EA+ + + +   G   +   + IVL   C++G+L +A+ 
Sbjct: 429 LPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALL 488

Query: 436 LLRLMLCRG--FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             + M+     F P   T   L+  L +AG  + A      +   G  P+  ++  L+
Sbjct: 489 FFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLM 546



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 158/280 (56%), Gaps = 3/280 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+++TYST+I GLCK G+  EA+E+ EEM  K  + PD  TY +++D  CR GKVD A +
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEK-GVNPDVATYTIIVDRLCRAGKVDEADE 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M   GC+ N   Y  L+NG CK+  ++ A ++ +EM +   +PD I Y T+++  C
Sbjct: 67  LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG--IYLN 413
           R G+V EA +    M  RG   D+V +N +L  L +EGK+ EA G+ + +      +  +
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPD 186

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +++  C+  + ++A++L + ++ +G++P   T N +L+ L +    ++A     
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 246

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +V+ G  P   ++++++   CR   +    EL +E+  K
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK 286



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 198/405 (48%), Gaps = 42/405 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F  V   KG+  +  TY +IL  LAR    +  + + ++M    C  +   +  ++
Sbjct: 206 AMKLFKDVI-AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 S H RV  M                 + CL L  E  +               R
Sbjct: 265 ------SGHCRVGNM-----------------ARCLELYEEMTEK--------------R 287

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+  + N +I   CK   ++ A +VL+EM K   + P+++TY+ L+DGLCK     +A
Sbjct: 288 FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG-AVPDVVTYNILLDGLCKTNLVDKA 346

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF  MV  +   PD ++Y+V+++G C+  KV  A+ + + M      P+V  +  LM+
Sbjct: 347 HELFSTMVD-NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMD 405

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK GKL EAK++ D M    + PD +  TTL++  CR  R DEA+ L + M E+G  A
Sbjct: 406 GLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVA 465

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLW-YDGIYL-NKASYRIVLNFSCQKGELEKAIE 435
           D++  NI+L GLCREGK+ +AL   + +   DG +  +  +Y  ++N   + G +++A++
Sbjct: 466 DVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVD 525

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             + M   G  P Y   N L+  L K G    A      + E GF
Sbjct: 526 YFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 120/217 (55%), Gaps = 4/217 (1%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G  P+V  Y+T+++G CK GK+ EA E+ +EM    + PD   YT +++  CRAG+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           VDEA EL  +M ERGC A+ V +N ++ GLC++  IE A  +LE++   G   +  +Y  
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +L+  C+ G++ +A +    M  RG+ P     N LL  L K G   + A  LF  ++M 
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAE-AWGLFKTMDMA 179

Query: 480 FK---PESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +   P+  ++  L++  CR  K   A +L  +++ K
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK 216



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 159/302 (52%), Gaps = 7/302 (2%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           LE++  ++E++ F+ +      ++D L + KK +    VL +M+          +  L+ 
Sbjct: 277 LELYEEMTEKR-FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 335

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
                +L ++  E+F  +       P + + S  LN L ++N+V  A+       +  +L
Sbjct: 336 GLCKTNLVDKAHELFSTMVD-NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER-KL 393

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   FNIL+   CK G L+ A ++L  M +  +  P+ +T +TL+ GLC++ R  EA+
Sbjct: 394 VPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNV-LPDGVTCTTLMHGLCRDKRTDEAV 452

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNG-CNPNVFNYTTLM 316
            LF+ MV K  +  D L +N+++ G CR GK+ +A    + M K++G  +P+V  YTTL+
Sbjct: 453 RLFQYMVEKGTV-ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           N   + G++ +A + F +M      PD + Y TL+N   + GR  +A  L + MKE+G  
Sbjct: 512 NALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 571

Query: 377 AD 378
           +D
Sbjct: 572 SD 573


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 194/362 (53%), Gaps = 7/362 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP+L A +T ++ L +   V+ A + L        + P+   ++ ++   C  G L  A 
Sbjct: 229 KPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR-GIPPDVVTYSTILHGFCSLGHLNEAT 287

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  EM    +  PN +T++ L+DGLCK G   EA  +FE M  K    P+A TYN L+D
Sbjct: 288 ILFNEMVGRNV-MPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGA-EPNAYTYNALMD 345

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+C   ++D A+K+++ M + GC P V +Y  L+NG+CK  +L EAK +  EM    L P
Sbjct: 346 GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTP 405

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           DT+ Y+TL+   C+ GR  EAL L KEM   G   D++T++ +L GLC+ G ++EAL +L
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +    I  +   Y I++      G+LE A EL   +   G  P   T   ++  L K 
Sbjct: 466 KSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKE 525

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK----ESGTI 518
           G++++A      + + GF P S S+ ++++   + +    A  L+DE+V K    +S T 
Sbjct: 526 GLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585

Query: 519 QV 520
           Q+
Sbjct: 586 QM 587



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 224/429 (52%), Gaps = 13/429 (3%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E E + A+ +FN +  ++G   +  +Y+T+++ L +         +LR+M  + CK +  
Sbjct: 175 EGEIKEAVGLFNEMV-RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLV 233

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLN---LLIESNQVDLAQN 187
            +  ++      +L    +++  ++  + R   P +   ST L+    L   N+  +  N
Sbjct: 234 AYTTIIDSLCKDTLVNDAMDLLSEM--VDRGIPPDVVTYSTILHGFCSLGHLNEATILFN 291

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            +   N    + PNT  F IL+   CK G +  A  V + M K + + PN  TY+ L+DG
Sbjct: 292 EMVGRN----VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTK-KGAEPNAYTYNALMDG 346

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C N +  EA ++ + MV K    P   +YN+LI+G+C+  ++D AK ++  M      P
Sbjct: 347 YCLNNQMDEAQKVLDIMVDKG-CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTP 405

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y+TLM G C+ G+ QEA  +F EM +  L PD + Y+TL++  C+ G +DEAL+LL
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           K M+E   + DIV +NI++ G+   GK+E A  +  KL+ DGI     +Y I++    ++
Sbjct: 466 KSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKE 525

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G  ++A EL R M   GFLP+  + N ++    +   +  A   +  +V   F  +S ++
Sbjct: 526 GLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585

Query: 488 ALLVELICR 496
            +L++L  R
Sbjct: 586 QMLLDLESR 594



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 188/362 (51%), Gaps = 20/362 (5%)

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           V+E    +  I ++K     +S C       NQ+DL      +   H     N    NIL
Sbjct: 92  VVEFGRFLGSIAKKKQYSTVVSLC-------NQMDL------FGVTH-----NVYSLNIL 133

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   C+   +  A  VL +M K  +  P+ IT++TLI+G C  G  +EA+ LF EMV + 
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQ-PDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              PD ++Y+ +I+G C+ G    A +++  M+  GC PN+  YTT+++  CK+  + +A
Sbjct: 193 H-QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++  EM +  + PD + Y+T+++ FC  G ++EA  L  EM  R    + VTF I++ G
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC+EG + EA  + E +   G   N  +Y  +++  C   ++++A ++L +M+ +G  P 
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             + N L+   CK    ++A   L  + E    P++ +++ L++ +C+  +   A  L  
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431

Query: 509 EL 510
           E+
Sbjct: 432 EM 433



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 166/321 (51%), Gaps = 4/321 (1%)

Query: 196 LRLKPNTCI--FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           LR+ P   +  F   +    K+    +   +  +M    +++ N+ + + LI+ LC+   
Sbjct: 84  LRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTH-NVYSLNILINCLCRLNH 142

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              AI +  +M  K  I PDA+T+N LI+G C  G++  A  +   M   G  P+V +Y+
Sbjct: 143 VVFAISVLGKMF-KLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYS 201

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T++NG CK G    A ++  +M+    KP+ + YTT+I+  C+   V++A++LL EM +R
Sbjct: 202 TVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR 261

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   D+VT++ IL G C  G + EA  +  ++    +  N  ++ I+++  C++G + +A
Sbjct: 262 GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEA 321

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             +   M  +G  P+  T N L+   C     ++A   L  +V+ G  P   S+ +L+  
Sbjct: 322 RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILING 381

Query: 494 ICRGRKLLFAFELLDELVIKE 514
            C+ R+L  A  LL E+  KE
Sbjct: 382 YCKRRRLDEAKSLLVEMSEKE 402



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 90/187 (48%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F  M     +P  + +   +    +  +    + L  +M   G   ++ + NI
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR   +  A+ +L K++  GI  +  ++  ++N  C +GE+++A+ L   M+ RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   + + ++  LCK+G    A   L  + E G KP   ++  +++ +C+   +  A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 505 ELLDELV 511
           +LL E+V
Sbjct: 253 DLLSEMV 259


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 246/508 (48%), Gaps = 42/508 (8%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
           V    R   +  G  +  I  +K+   A+ + N + +  G  HN  +   +++ L R   
Sbjct: 88  VRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQM-DLFGVTHNVYSLNVLINCLCRLSH 146

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
            +   +V+ +M     +     F  L+    N    +  + +F+++   +  +P++ + +
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM-VWSGHEPNVISYN 205

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           T +N L ++    +A    +   Q+ R KPN   +N +I   CK   +  A E L EM  
Sbjct: 206 TVINGLCKNGNTIMAVRVFRKMEQN-RGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVD 264

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD--------QIL----------- 271
             +  P+++TY+T++ G C  G+  EA  LF+EMV ++         IL           
Sbjct: 265 RGIP-PDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVS 323

Query: 272 ---------------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
                          P+A TYN L+DG+C   ++D A K++  M   GC PN+ +Y  L+
Sbjct: 324 EARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILI 383

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK  ++ EAK +  EM    L PDT+ Y+TL+   C+ GR  EAL L KEM   G  
Sbjct: 384 NGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLL 443

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D++ ++I+L G C+ G ++EAL +L+++    I  N   Y I++      G+LE A EL
Sbjct: 444 PDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKEL 503

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +   G  P   T N ++  L K G++++A      + + GF P+S S+ ++++   +
Sbjct: 504 FSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQ 563

Query: 497 GRKLLFAFELLDELVIK----ESGTIQV 520
            +    A +L+DE+V K    +S T Q+
Sbjct: 564 NQDSSTAIQLIDEMVGKRFSADSSTFQM 591



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 165/294 (56%), Gaps = 2/294 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  FNIL+   CK G +  A   + E    + + PN  TY+ L+DG C + +  EAI+
Sbjct: 304 PDTVTFNILVDGLCKEGMVSEA-RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIK 362

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M+ K    P+  +YN+LI+G+C+  +++ AK+++  M      P+   Y+TLM G 
Sbjct: 363 VLGIMIGKG-CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G+ +EA  +F EM +  L PD + Y+ L++ FC+ G +DEAL+LLKEM ER  K +I
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           + + I++ G+   GK+E A  +  KL  DGI  +  +Y +++    ++G  ++A E  R 
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           M   GFLP   + N ++    +   +  A   +  +V   F  +S ++ +L++L
Sbjct: 542 MEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 89/187 (47%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F  M     +P  + +   +    +  +   A+ L  +M   G   ++ + N+
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR   ++ A+ ++ K++  GI  +  ++  ++N  C +G++++A+ L   M+  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+  + N ++  LCK G    A      + +   KP   ++  +++ +C+ R +  A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 505 ELLDELV 511
           E L E+V
Sbjct: 257 EFLSEMV 263


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 233/486 (47%), Gaps = 57/486 (11%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE---- 130
           P  +L  F  VS+Q+ F  N  +Y  ++  L+R + ++   A L Q+  + CKF +    
Sbjct: 82  PTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV-DLCKFKDRGNV 140

Query: 131 ----------------GIFLNLMKHFSNCSLHERVLEMF--------------------- 153
                            +F  ++K +    L +  L +F                     
Sbjct: 141 IWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNN 200

Query: 154 -------HKIHPITREK------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
                  H  H + ++       P +  +S  +N   +  +VD A  F+K   ++L ++P
Sbjct: 201 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK-KMENLGVEP 259

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   ++ LI  +   G +E+A  VLK M +  +S  N++TY+ LI G CK  +  EA ++
Sbjct: 260 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLIKGYCKQCKMDEAEKV 318

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
              M  +  ++PD   Y VLIDG+CR GK+D A ++++ M   G   N+F   +L+NG+C
Sbjct: 319 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 378

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G++ EA+ V   M ++ LKPD+  Y TL++ +CR G   EA  L  +M + G +  ++
Sbjct: 379 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 438

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N +L GLCR G  ++AL +   +   G+  ++  Y  +L+   +    E A  L + +
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L RGF     T N ++  LCK G   +A      + ++G  P+  ++  L++  C+   +
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 501 LFAFEL 506
             AF++
Sbjct: 559 GQAFKV 564



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 48/439 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-SNCSL 145
           E  G   N  TY ++++        EA   VL+ M+ +    +   +  L+K +   C +
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 312

Query: 146 HE--RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPN 201
            E  +VL    +   +    P  +A    ++    + ++D A   L   ++ LRL  K N
Sbjct: 313 DEAEKVLRGMQEEAALV---PDERAYGVLIDGYCRTGKIDDAVRLL---DEMLRLGLKTN 366

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
             I N LI  +CKRG +  A  V+  M    +  P+  +Y+TL+DG C+ G   EA  L 
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLK-PDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF-- 319
           ++M+ ++ I P  LTYN L+ G CR G  D A +I   M   G  P+   Y+TL++G   
Sbjct: 426 DKML-QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFK 484

Query: 320 ---------------------------------CKEGKLQEAKEVFDEMKNFLLKPDTIG 346
                                            CK GK+ EA+E+FD+MK+    PD I 
Sbjct: 485 MENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGIT 544

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y TLI+ +C+A  V +A ++   M+       I  +N ++ GL +  ++ E   +L ++ 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 604

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+  N  +Y  +++  C++G L+KA      M   G   +    + ++  L + G  +
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 467 DAAIALFGLVEMGFKPESD 485
           +A + +  +V+ GF P+ +
Sbjct: 665 EANLLMQKMVDHGFFPDHE 683



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 205/434 (47%), Gaps = 72/434 (16%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR----------QMTYET-- 125
           AL+I++ +  ++G   +   Y+T+LD L + + FE    + +          ++T+ T  
Sbjct: 456 ALQIWHLMM-KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514

Query: 126 ---CKFHEGI----FLNLMKHFSNCS---LHERVL-----------EMFHKIHPITRE-- 162
              CK  + +      + MK    CS   +  R L           + F     + RE  
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLG-CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 573

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
            PS++  ++ ++ L +S ++    + L  +   +R L PN   +  LI   CK G L+ A
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEVTDLL--TEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS--------------- 266
           F    EM ++ +S  N+I  ST++ GL + GR  EA  L ++MV                
Sbjct: 632 FSSYFEMTENGLS-ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 267 ----------------KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
                           K  +LP+ + YN+ I G C+ GKVD A++    +   G  P+ F
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y TL++G+   G + EA  + DEM    L P+ + Y  LIN  C++  VD A  L  ++
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            ++G   ++VT+N ++ G C+ G ++ A  + +K+  +GI  +  +Y  ++N  C+ G++
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDI 870

Query: 431 EKAIELLRLMLCRG 444
           E++++LL  M+  G
Sbjct: 871 ERSMKLLNQMIKAG 884



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 198/430 (46%), Gaps = 17/430 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  +  T+ T++  L +  K    + +  +M    C      +  L+  +   S    
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS---N 557

Query: 149 VLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIF 205
           V + F     + RE   PS++  ++ ++ L +S ++    + L  +   +R L PN   +
Sbjct: 558 VGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL--TEMGIRGLTPNIVTY 615

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   CK G L+ AF    EM ++ +S  N+I  ST++ GL + GR  EA  L ++MV
Sbjct: 616 GALIDGWCKEGMLDKAFSSYFEMTENGLS-ANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
                 PD   +   +    R   + +    ++        PN   Y   + G CK GK+
Sbjct: 675 DHG-FFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 730

Query: 326 QEAKEVFD--EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +A+  F    +K F+  PD   Y TLI+ +  AG VDEA  L  EM  RG   +IVT+N
Sbjct: 731 DDARRFFSMLSLKGFV--PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYN 788

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC+   ++ A  +  KL   G++ N  +Y  +++  C+ G ++ A +L   M+  
Sbjct: 789 ALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T + L+  LCK G  E +   L  +++ G   +   +  LV+   R  ++   
Sbjct: 849 GISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKI 908

Query: 504 FELLDELVIK 513
            +L D + I+
Sbjct: 909 HKLYDMMHIR 918



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 143/266 (53%), Gaps = 7/266 (2%)

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           GL KN     A+ +F+ M  K   +P   + N L++   + G+   A  + + M   G  
Sbjct: 170 GLTKN-----ALYVFDNM-GKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIV 223

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+VF  + ++N FCK+GK+ EA     +M+N  ++P+ + Y +LIN +   G V+ A  +
Sbjct: 224 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 283

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL-NKASYRIVLNFSC 425
           LK M E+G   ++VT+ +++ G C++ K++EA  +L  +  +   + ++ +Y ++++  C
Sbjct: 284 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 343

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G+++ A+ LL  ML  G   +    N L+   CK G   +A   +  +V+   KP+S 
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 403

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           S+  L++  CR      AF L D+++
Sbjct: 404 SYNTLLDGYCREGHTSEAFNLCDKML 429


>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 225/426 (52%), Gaps = 7/426 (1%)

Query: 66  ISLIKCEKEPQCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
           +S+I  ++    AL+IF+   +  + F HN  TY  +++KL++ + FE ++ ++ Q+   
Sbjct: 105 VSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKS 164

Query: 125 TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
             K  E +F+ +++++      +  +  F +I P    +PS+++ +T LN L+++ + DL
Sbjct: 165 QIKCGENLFITVIRNYGFAGRPKLAIRTFLRI-PSFGLQPSVRSFNTLLNTLVQNKRFDL 223

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYST 243
                K   +   + PN    NIL+K  CK+  +++A  VL+EM    M + PN++TY+T
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEM--PAMGFIPNVVTYTT 281

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           ++ G    G    A  +F E++ +  + PD  TY +L+DG+C+ G+   A K+M+ M+ N
Sbjct: 282 ILGGYVSKGDMVGARRVFGEILDRGWV-PDPTTYTILMDGYCKKGRFMDAVKVMDEMEEN 340

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
              PN   Y  ++  +CKE K  E   + D+M      P +     +I+  C  G+V+ A
Sbjct: 341 RVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVA 400

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            EL K++ ++ C  D    + ++  LC+EGK+ EA  + ++ +  G   +  +Y  ++  
Sbjct: 401 CELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FEKGSIPSTLTYNALIAG 459

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ GEL +A  L   M+ +G +P+  T N L+   CK G A +    +  +++ G  P 
Sbjct: 460 MCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519

Query: 484 SDSWAL 489
             ++A+
Sbjct: 520 KATYAI 525



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 151/278 (54%), Gaps = 1/278 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++ +++TL++ L +N RF     +F+    K  I+P+  T N+L+   C+   +D A +
Sbjct: 203 PSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIR 262

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++E M   G  PNV  YTT++ G+  +G +  A+ VF E+ +    PD   YT L++ +C
Sbjct: 263 VLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYC 322

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + GR  +A++++ EM+E   + + VT+ +I+   C+E K  E L +L+ +       + A
Sbjct: 323 KKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSA 382

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
               V++  C++G++E A EL + +L +   P  A ++ L+  LCK G   +A   LF  
Sbjct: 383 LCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEAR-KLFDE 441

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            E G  P + ++  L+  +C G +L  A  L D +V K
Sbjct: 442 FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEK 479



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 3/211 (1%)

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C  N+F   T++  +   G+ + A   F  + +F L+P    + TL+N   +  R D   
Sbjct: 168 CGENLF--ITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVH 225

Query: 365 ELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            + K  +++ G   ++ T NI++  LC++  I+ A+ +LE++   G   N  +Y  +L  
Sbjct: 226 LMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGG 285

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
              KG++  A  +   +L RG++P   T   L+   CK G   DA   +  + E   +P 
Sbjct: 286 YVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPN 345

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKE 514
             ++ +++E  C+ +K      LLD+++ K+
Sbjct: 346 DVTYGVIIEAYCKEKKSGEVLNLLDDMLEKK 376


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 233/486 (47%), Gaps = 57/486 (11%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE---- 130
           P  +L  F  VS+Q+ F  N  +Y  ++  L+R + ++   A L Q+  + CKF +    
Sbjct: 48  PTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLV-DLCKFKDRGNV 106

Query: 131 ----------------GIFLNLMKHFSNCSLHERVLEMF--------------------- 153
                            +F  ++K +    L +  L +F                     
Sbjct: 107 IWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNN 166

Query: 154 -------HKIHPITREK------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
                  H  H + ++       P +  +S  +N   +  +VD A  F+K   ++L ++P
Sbjct: 167 LVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK-KMENLGVEP 225

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   ++ LI  +   G +E+A  VLK M +  +S  N++TY+ LI G CK  +  EA ++
Sbjct: 226 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLIKGYCKQCKMDEAEKV 284

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
              M  +  ++PD   Y VLIDG+CR GK+D A ++++ M   G   N+F   +L+NG+C
Sbjct: 285 LRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC 344

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G++ EA+ V   M ++ LKPD+  Y TL++ +CR G   EA  L  +M + G +  ++
Sbjct: 345 KRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVL 404

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N +L GLCR G  ++AL +   +   G+  ++  Y  +L+   +    E A  L + +
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L RGF     T N ++  LCK G   +A      + ++G  P+  ++  L++  C+   +
Sbjct: 465 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 524

Query: 501 LFAFEL 506
             AF++
Sbjct: 525 GQAFKV 530



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 48/439 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-SNCSL 145
           E  G   N  TY ++++        EA   VL+ M+ +    +   +  L+K +   C +
Sbjct: 219 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 278

Query: 146 HE--RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPN 201
            E  +VL    +   +    P  +A    ++    + ++D A   L   ++ LRL  K N
Sbjct: 279 DEAEKVLRGMQEEAALV---PDERAYGVLIDGYCRTGKIDDAVRLL---DEMLRLGLKTN 332

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
             I N LI  +CKRG +  A  V+  M    +  P+  +Y+TL+DG C+ G   EA  L 
Sbjct: 333 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLK-PDSYSYNTLLDGYCREGHTSEAFNLC 391

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF-- 319
           ++M+ ++ I P  LTYN L+ G CR G  D A +I   M   G  P+   Y+TL++G   
Sbjct: 392 DKML-QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFK 450

Query: 320 ---------------------------------CKEGKLQEAKEVFDEMKNFLLKPDTIG 346
                                            CK GK+ EA+E+FD+MK+    PD I 
Sbjct: 451 MENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGIT 510

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y TLI+ +C+A  V +A ++   M+       I  +N ++ GL +  ++ E   +L ++ 
Sbjct: 511 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 570

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+  N  +Y  +++  C++G L+KA      M   G   +    + ++  L + G  +
Sbjct: 571 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 630

Query: 467 DAAIALFGLVEMGFKPESD 485
           +A + +  +V+ GF P+ +
Sbjct: 631 EANLLMQKMVDHGFFPDHE 649



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 166/356 (46%), Gaps = 40/356 (11%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  +  T+ T++  L +  K    + +  +M    C      +  L+  +   S    
Sbjct: 467 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS---N 523

Query: 149 VLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIF 205
           V + F     + RE   PS++  ++ ++ L +S ++    + L  +   +R L PN   +
Sbjct: 524 VGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL--TEMGIRGLTPNIVTY 581

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   CK G L+ AF    EM ++ +S  N+I  ST++ GL + GR  EA  L ++MV
Sbjct: 582 GALIDGWCKEGMLDKAFSSYFEMTENGLS-ANIIICSTMVSGLYRLGRIDEANLLMQKMV 640

Query: 266 S-------------------------------KDQILPDALTYNVLIDGFCRGGKVDRAK 294
                                           K  +LP+ + YN+ I G C+ GKVD A+
Sbjct: 641 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 700

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +    +   G  P+ F Y TL++G+   G + EA  + DEM    L P+ + Y  LIN  
Sbjct: 701 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           C++  VD A  L  ++ ++G   ++VT+N ++ G C+ G ++ A  + +K+  +GI
Sbjct: 761 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 816



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 34/339 (10%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FN +I   CK G +  A E+  +MK    S P+ ITY TLIDG CK     +A ++   M
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCS-PDGITYRTLIDGYCKASNVGQAFKVKGAM 534

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             ++ I P    YN LI G  +  ++     ++  M   G  PN+  Y  L++G+CKEG 
Sbjct: 535 -EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 593

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG--------CK 376
           L +A   + EM    L  + I  +T+++   R GR+DEA  L+++M + G         K
Sbjct: 594 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 653

Query: 377 ADI------------------------VTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
           +DI                        + +NI + GLC+ GK+++A      L   G   
Sbjct: 654 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 713

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y  +++     G +++A  L   ML RG +P+  T N L+  LCK+   + A    
Sbjct: 714 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF 773

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             L + G  P   ++  L++  C+   +  AF+L D+++
Sbjct: 774 HKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 812



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 143/266 (53%), Gaps = 7/266 (2%)

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           GL KN     A+ +F+ M  K   +P   + N L++   + G+   A  + + M   G  
Sbjct: 136 GLTKN-----ALYVFDNM-GKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIV 189

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+VF  + ++N FCK+GK+ EA     +M+N  ++P+ + Y +LIN +   G V+ A  +
Sbjct: 190 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 249

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL-NKASYRIVLNFSC 425
           LK M E+G   ++VT+ +++ G C++ K++EA  +L  +  +   + ++ +Y ++++  C
Sbjct: 250 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 309

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G+++ A+ LL  ML  G   +    N L+   CK G   +A   +  +V+   KP+S 
Sbjct: 310 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 369

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           S+  L++  CR      AF L D+++
Sbjct: 370 SYNTLLDGYCREGHTSEAFNLCDKML 395



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 182/438 (41%), Gaps = 40/438 (9%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E FN   +  Q+G      TY T+L  L R   F+    +   M        E  +  L+
Sbjct: 386 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 445

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    E    ++  I      K  +   +    L      V+  + F K  +  L 
Sbjct: 446 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD--LG 503

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +  LI  +CK   +  AF+V   M++  +S P++  Y++LI GL K+ R  E 
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPIS-PSIEMYNSLISGLFKSRRLVEV 562

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L  EM  +  + P+ +TY  LIDG+C+ G +D+A      M  NG + N+   +T+++
Sbjct: 563 TDLLTEMGIRG-LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 621

Query: 318 GFCKEGKLQEAKEVFDEM---------------------------------KNFLLKPDT 344
           G  + G++ EA  +  +M                                 K FLL P+ 
Sbjct: 622 GLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL-PNN 680

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I Y   I   C+ G+VD+A      +  +G   D  T+  ++ G    G ++EA  + ++
Sbjct: 681 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 740

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+  N  +Y  ++N  C+   +++A  L   +  +G  P+  T N L+   CK G 
Sbjct: 741 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 800

Query: 465 AEDAAIALFGLVEMGFKP 482
            + A      ++E G  P
Sbjct: 801 MDAAFKLKDKMIEEGISP 818



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 6/210 (2%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           ST ++ L    ++D A   ++    H     + C     +K   +   ++   + L E  
Sbjct: 617 STMVSGLYRLGRIDEANLLMQKMVDHGFFPDHEC----FLKSDIRYAAIQKIADSLDESC 672

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           K+ +  PN I Y+  I GLCK G+  +A   F  M+S    +PD  TY  LI G+   G 
Sbjct: 673 KTFL-LPNNIVYNIAIAGLCKTGKVDDARRFFS-MLSLKGFVPDNFTYCTLIHGYSAAGN 730

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           VD A ++ + M   G  PN+  Y  L+NG CK   +  A+ +F ++    L P+ + Y T
Sbjct: 731 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 790

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADI 379
           LI+ +C+ G +D A +L  +M E G    I
Sbjct: 791 LIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 222/427 (51%), Gaps = 12/427 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
           + G+  ++ T+ T++  L R+ +     A++ +M  + C+      GI +N +    +  
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTC 203
           L   +L+   +     + +P +   +T ++ L     V+ A N F +  N+ +R  PN  
Sbjct: 239 LALSLLKKMEQ----GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR--PNVV 292

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N LI+  C  G    A  +L +M + +++ PN++T+S LID   K G+  EA +L++E
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ K  I PD  TY+ LI+GFC   ++D AK + E M +  C PNV  Y TL+ GFCK  
Sbjct: 352 MI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++ E  E+F EM    L  +T+ YTTLI+ F +A   D A  + K+M   G   DI+T++
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I+L GLC  GK+E AL + E L    +  +  +Y I++   C+ G++E   +L   +  +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P+  T   ++   C+ G+ E+A      + E G  P+S ++  L+    R      +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590

Query: 504 FELLDEL 510
            EL+ E+
Sbjct: 591 AELIREM 597



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 219/440 (49%), Gaps = 36/440 (8%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSN---- 142
           G +HN  TY+ +++   R  +     AVL +M    YE         LN   H +     
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170

Query: 143 CSLHERVLEMFHK---------IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
            SL  +++EM ++         IH + R   + +A++    ++++  Q DL         
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT------- 223

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
                      + I++   CKRG ++ A  +LK+M++ ++  P ++ Y+T+ID LC    
Sbjct: 224 -----------YGIVVNGLCKRGDIDLALSLLKKMEQGKIE-PGVVIYNTIIDALCNYKN 271

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+ LF EM +K  I P+ +TYN LI   C  G+   A +++  M     NPNV  ++
Sbjct: 272 VNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++ F KEGKL EA++++DEM    + PD   Y++LIN FC   R+DEA  + + M  +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            C  ++VT+N ++ G C+  +++E + +  ++   G+  N  +Y  +++   Q  E + A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             + + M+  G LP   T + LL  LC  G  E A +    L     +P+  ++ +++E 
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510

Query: 494 ICRGRKLLFAFELLDELVIK 513
           +C+  K+   ++L   L +K
Sbjct: 511 MCKAGKVEDGWDLFCSLSLK 530



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 152/315 (48%), Gaps = 2/315 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F+ L+    K    +    + ++M+   +S+ NL TYS LI+  C+  +   A+ 
Sbjct: 79  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH-NLYTYSILINCFCRRSQLSLALA 137

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  +M+ K    PD +T N L++GFC G ++  A  ++  M   G  P+ F + TL++G 
Sbjct: 138 VLAKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            +  +  EA  + D M     +PD + Y  ++N  C+ G +D AL LLK+M++   +  +
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +N I+  LC    + +AL +  ++   GI  N  +Y  ++   C  G    A  LL  
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ R   P+  T + L+    K G   +A      +++    P+  +++ L+   C   +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376

Query: 500 LLFAFELLDELVIKE 514
           L  A  + + ++ K+
Sbjct: 377 LDEAKHMFELMISKD 391



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 94/196 (47%), Gaps = 3/196 (1%)

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           KL +A  +F +M      P  + ++ L++   +  + D  + L ++M+  G   ++ T++
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++   CR  ++  AL +L K+   G   +  +   +LN  C    +  A+ L+  M+  
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G+ P   T N L+  L +   A +A   +  +V  G +P+  ++ ++V  +C+   +  A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 504 FELLDELVIKESGTIQ 519
             LL ++   E G I+
Sbjct: 241 LSLLKKM---EQGKIE 253


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 199/369 (53%), Gaps = 19/369 (5%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNL---LIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           R+++    ++P     PS  A+  C  L   L  S +   A+  L  S       P+  +
Sbjct: 88  RLVDSLAGLNP-----PSPAAVGPCAALIKKLCASGRTADARRVLAASG------PDVMV 136

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++  +C  G L++A  ++ +M       P+  TY+TLI GLC  GR   A+ + E+M
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMPVE----PDAYTYNTLIRGLCGRGRTSNALAVLEDM 192

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +   LPD +TY +L++  C+     +A K+++ M + GC P++  Y  ++NG C+EG+
Sbjct: 193 FRRG-CLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +++A E    + ++  +P+T+ Y  ++     A R ++A +L++EM  +GC  ++VTFN+
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR G +E A+ +LE++   G   N  SY  +L+  C++ ++ KA+E + LM+ RG
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   + N LL  LC+ G  + A   L  L + G  P   S+  +++ + +  K   A 
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431

Query: 505 ELLDELVIK 513
           ELLDE+  K
Sbjct: 432 ELLDEMTSK 440



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 195/372 (52%), Gaps = 4/372 (1%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  L    +     AVL  M    C      +  L++     S +++ +++  ++
Sbjct: 168 TYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM 227

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
           H      P +   +  LN + +  +V+ A  FLK    +   +PNT  +NI++K      
Sbjct: 228 HD-KGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSY-GCEPNTVSYNIVLKGLFTAE 285

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
             E A ++++EM       PN++T++ LI  LC+ G    A+E+ E+M  +    P++L+
Sbjct: 286 RWEDAEKLMEEMAHKGCP-PNVVTFNMLISFLCRRGLVEPAMEVLEQM-PQYGCTPNSLS 343

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN L+  FC+  K+ +A + +E M + GC P++ +Y TL+   C+ G++  A E+  ++K
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK 403

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +    P  I Y T+I+   +AG+  EALELL EM  +G + DI+T++ I  GLCRE +IE
Sbjct: 404 DKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA+    K+   GI    A Y  +L   C++ E   AI+L   M+  G +P+ +T   L+
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 457 VRLCKAGMAEDA 468
             L   G+ ++A
Sbjct: 524 EGLAYEGLVKEA 535



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 191/368 (51%), Gaps = 41/368 (11%)

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           + Q+D A+  +      + ++P+   +N LI+  C RG   +A  VL++M + +   P++
Sbjct: 147 AGQLDAARRLVA----DMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR-RGCLPDV 201

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA----- 293
           +TY+ L++  CK   +++A++L +EM  K    PD +TYNV+++G C+ G+V+ A     
Sbjct: 202 VTYTILLEATCKRSGYKQAMKLLDEMHDKG-CAPDIVTYNVVLNGICQEGRVEDAMEFLK 260

Query: 294 ------------------------------KKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                                         +K+ME M + GC PNV  +  L++  C+ G
Sbjct: 261 NLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRG 320

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A EV ++M  +   P+++ Y  L++ FC+  ++ +A+E ++ M  RGC  DIV++N
Sbjct: 321 LVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYN 380

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            +L  LCR G+++ A+ +L +L   G      SY  V++   + G+ ++A+ELL  M  +
Sbjct: 381 TLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK 440

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T + +   LC+    E+A      + +MG +P +  +  ++  +C+ R+   A
Sbjct: 441 GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNA 500

Query: 504 FELLDELV 511
            +L   ++
Sbjct: 501 IDLFAYMI 508



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 165/294 (56%), Gaps = 4/294 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+++   C+ G +E A E LK +  S    PN ++Y+ ++ GL    R+ +A +
Sbjct: 234 PDIVTYNVVLNGICQEGRVEDAMEFLKNLP-SYGCEPNTVSYNIVLKGLFTAERWEDAEK 292

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L EEM  K    P+ +T+N+LI   CR G V+ A +++E M   GC PN  +Y  L++ F
Sbjct: 293 LMEEMAHKG-CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAF 351

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ K+ +A E  + M +    PD + Y TL+   CR G VD A+ELL ++K++GC   +
Sbjct: 352 CKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVL 411

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++ GL + GK +EAL +L+++   G+  +  +Y  + +  C++  +E+A+     
Sbjct: 412 ISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK 471

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVE 492
           +   G  P  A  N +L+ LCK     + AI LF  ++  G  P   ++ +LVE
Sbjct: 472 VQDMGIRPTAALYNAILLGLCKRRETHN-AIDLFAYMISSGCMPNESTYTILVE 524



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 146/252 (57%), Gaps = 2/252 (0%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H    PN   FN+LI   C+RG +E A EVL++M +   + PN ++Y+ L+   CK  + 
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCT-PNSLSYNPLLHAFCKQKKI 357

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A+E  E MVS+    PD ++YN L+   CR G+VD A +++  +K+ GC+P + +Y T
Sbjct: 358 HKAMEFVELMVSRG-CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNT 416

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G  K GK +EA E+ DEM +  L+PD I Y+T+ +  CR  R++EA+    ++++ G
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG 476

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            +     +N IL GLC+  +   A+ +   +   G   N+++Y I++     +G +++A 
Sbjct: 477 IRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAR 536

Query: 435 ELLRLMLCRGFL 446
           EL   +  RG +
Sbjct: 537 ELFAQLCSRGVV 548



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   +  TY  +L+ + +  + E     L+ +    C+ +   +  ++K        E 
Sbjct: 230 KGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWED 289

Query: 149 ----VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
               + EM HK  P     P++   +  ++ L     V+ A   L+   Q+    PN+  
Sbjct: 290 AEKLMEEMAHKGCP-----PNVVTFNMLISFLCRRGLVEPAMEVLEQMPQY-GCTPNSLS 343

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+   CK+  +  A E + E+  S+  YP++++Y+TL+  LC+NG    AIEL  ++
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFV-ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL 402

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K    P  ++YN +IDG  + GK   A ++++ M + G  P++  Y+T+ +G C+E +
Sbjct: 403 KDKG-CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDR 461

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++EA   F ++++  ++P    Y  ++   C+      A++L   M   GC  +  T+ I
Sbjct: 462 IEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTI 521

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGI 410
           ++ GL  EG ++EA  +  +L   G+
Sbjct: 522 LVEGLAYEGLVKEARELFAQLCSRGV 547


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 241/472 (51%), Gaps = 13/472 (2%)

Query: 42  PPVETSDTCVDAR--KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYA 99
           P V  S+  ++ R   + + +     +  +K ++     L  F+ ++    F H  +TY 
Sbjct: 19  PFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYR 78

Query: 100 TILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPI 159
            ++++L R  + + V  +L+QM  +     E +F+ ++  +      E+ L+MF++I   
Sbjct: 79  VMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEF 138

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
              KP+++  +  L+ L+  N+  +  N L  + +   L PN   +NIL+K  CK   ++
Sbjct: 139 GC-KPTVRIYNHLLDALLSENKFQMI-NPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           +A ++  EM       P+ +TY+T++  LCK G+  +A EL        +  P    YN 
Sbjct: 197 AAHKLFVEMSNKGCP-PDAVTYTTMVSSLCKAGKIDDAREL------AGRFKPSVPVYNA 249

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LIDG C+ G+++ A K++  M +NG +PNV +Y+ ++N  C  G ++ A  +F +M    
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 340 LKPDTIGYTTLI-NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              +   +T LI  CF R G++ EAL+L K M + GC+ ++V +N ++ GLC  G +EEA
Sbjct: 310 CDANIHTFTPLIKGCFMR-GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           L + +++   G   N  +Y I+++   + G+L  A E    M+  G  P+  T   ++  
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           LCK  M + A   +  +   G  P + ++   ++ +C   ++ +A +LL+ +
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 175/372 (47%), Gaps = 48/372 (12%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + N  +Y+ I++ L      E   A+  QM    C  +   F  L+K    C +  ++
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK---GCFMRGKL 330

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIF 205
            E       + ++  +P++ A +T ++ L  +  ++ A   L+  +Q  R    PN   +
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA---LQVCDQMQRSGCLPNVTTY 387

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           +ILI    K G L  A E    M  S    PN++TY+ ++D LCKN  F +A  L E+M 
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMI-SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKM- 445

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           + +   P+ +T+N  I G C  G+V+ A K++E M+ +GC PN+  Y  L++   +  K 
Sbjct: 446 TLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKY 505

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EA  +F E++   L+P+ + Y T++  F RAG + EAL+L  +   RG   D +T+N +
Sbjct: 506 EEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTM 565

Query: 386 LGGLCREGK------------------------------------IEEALGMLEKLWYDG 409
           +   C++GK                                    IEEA+  L+K    G
Sbjct: 566 IHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQG 625

Query: 410 IYLNKASYRIVL 421
           I  N A++  ++
Sbjct: 626 ICPNFATWNALV 637



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 147/301 (48%), Gaps = 7/301 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N   Y T++  L      E    V  QM    C  +   +  L+  F+      
Sbjct: 342 QDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLV 401

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              E ++++  I+   +P++   +  +++L +++  D A + ++         PNT  FN
Sbjct: 402 GASETWNRM--ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE-GCTPNTITFN 458

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
             IK  C  G +E A ++L+ M+      PN+ TY+ L+D L +  ++ EA  LF+E+ +
Sbjct: 459 TFIKGLCGNGRVEWAMKLLERMQ-GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           ++ + P+ +TYN ++ GF R G +  A ++       G  P+   Y T+++ +CK+GK++
Sbjct: 518 RN-LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576

Query: 327 EAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            A ++ + + +     PD I YT+LI   C    ++EA+  L +   +G   +  T+N +
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636

Query: 386 L 386
           +
Sbjct: 637 V 637



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 129/269 (47%), Gaps = 5/269 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   N  TY+ ++D  A+            +M    C+ +   +  ++      S+ 
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           ++   +  K+  +    P+    +T +  L  + +V+ A   L+    H  L PN   +N
Sbjct: 436 DQANSLVEKM-TLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCL-PNITTYN 493

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L+    +    E AF + +E++   +  PNL+TY+T++ G  + G   EA++LF + + 
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARNLQ-PNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTTLMNGFCKEGKL 325
           +    PD++TYN +I  +C+ GKV  A +++E + +    +P++  YT+L+ G C    +
Sbjct: 553 RGTA-PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNI 611

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +EA    D+  N  + P+   +  L+ CF
Sbjct: 612 EEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 128/277 (46%), Gaps = 7/277 (2%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           L+  S ++  L  +      +  F  + + +     A TY V+I+   R  ++D  + I+
Sbjct: 38  LLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYIL 97

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + MK +G N     +  ++NG+ + G  ++A ++F  +  F  KP    Y  L++     
Sbjct: 98  QQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSE 157

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            +      L   MK+ G   ++ T+NI+L  LC+  +++ A  +  ++   G   +  +Y
Sbjct: 158 NKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTY 217

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LV 476
             +++  C+ G+++ A E     L   F P     N L+  +CK G  E  AI L G ++
Sbjct: 218 TTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIE-VAIKLLGEMM 271

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           + G  P   S++ ++  +C    +  AF L  ++ ++
Sbjct: 272 DNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 241/472 (51%), Gaps = 13/472 (2%)

Query: 42  PPVETSDTCVDAR--KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYA 99
           P V  S+  ++ R   + + +     +  +K ++     L  F+ ++    F H  +TY 
Sbjct: 19  PFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYR 78

Query: 100 TILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPI 159
            ++++L R  + + V  +L+QM  +     E +F+ ++  +      E+ L+MF++I   
Sbjct: 79  VMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEF 138

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
              KP+++  +  L+ L+  N+  +  N L  + +   L PN   +NIL+K  CK   ++
Sbjct: 139 GC-KPTVRIYNHLLDALLSENKFQMI-NPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           +A ++  EM       P+ +TY+T++  LCK G+  +A EL        +  P    YN 
Sbjct: 197 AAHKLFVEMSNKGCP-PDAVTYTTMVSSLCKAGKIDDAREL------AGRFKPSVPVYNA 249

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LIDG C+ G+++ A K++  M +NG +PNV +Y+ ++N  C  G ++ A  +F +M    
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 340 LKPDTIGYTTLI-NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              +   +T LI  CF R G++ EAL+L K M + GC+ ++V +N ++ GLC  G +EEA
Sbjct: 310 CDANIHTFTPLIKGCFMR-GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           L + +++   G   N  +Y I+++   + G+L  A E    M+  G  P+  T   ++  
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           LCK  M + A   +  +   G  P + ++   ++ +C   ++ +A +LL+ +
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 175/372 (47%), Gaps = 48/372 (12%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + N  +Y+ I++ L      E   A+  QM    C  +   F  L+K    C +  ++
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK---GCFMRGKL 330

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIF 205
            E       + ++  +P++ A +T ++ L  +  ++ A   L+  +Q  R    PN   +
Sbjct: 331 YEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA---LQVCDQMQRSGCLPNVTTY 387

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           +ILI    K G L  A E    M  S    PN++TY+ ++D LCKN  F +A  L E+M 
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMI-SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKM- 445

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           + +   P+ +T+N  I G C  G+V+ A K++E M+ +GC PN+  Y  L++   +  K 
Sbjct: 446 TLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKY 505

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EA  +F E++   L+P+ + Y T++  F RAG + EAL+L  +   RG   D +T+N +
Sbjct: 506 EEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTM 565

Query: 386 LGGLCREGK------------------------------------IEEALGMLEKLWYDG 409
           +   C++GK                                    IEEA+  L+K    G
Sbjct: 566 IHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQG 625

Query: 410 IYLNKASYRIVL 421
           I  N A++  ++
Sbjct: 626 ICPNFATWNALV 637



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 147/301 (48%), Gaps = 7/301 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N   Y T++  L      E    V  QM    C  +   +  L+  F+      
Sbjct: 342 QDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLV 401

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              E ++++  I+   +P++   +  +++L +++  D A + ++         PNT  FN
Sbjct: 402 GASETWNRM--ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE-GCTPNTMTFN 458

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
             IK  C  G +E A ++L+ M+      PN+ TY+ L+D L +  ++ EA  LF+E+ +
Sbjct: 459 TFIKGLCGNGRVEWAMKLLERMQ-GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           ++ + P+ +TYN ++ GF R G +  A ++       G  P+   Y T+++ +CK+GK++
Sbjct: 518 RN-LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576

Query: 327 EAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            A ++ + + +     PD I YT+LI   C    ++EA+  L +   +G   +  T+N +
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636

Query: 386 L 386
           +
Sbjct: 637 V 637



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 129/269 (47%), Gaps = 5/269 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   N  TY+ ++D  A+            +M    C+ +   +  ++      S+ 
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           ++   +  K+  +    P+    +T +  L  + +V+ A   L+    H  L PN   +N
Sbjct: 436 DQANSLVEKM-TLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCL-PNITTYN 493

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L+    +    E AF + +E++   +  PNL+TY+T++ G  + G   EA++LF + + 
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARNLQ-PNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTTLMNGFCKEGKL 325
           +    PD++TYN +I  +C+ GKV  A +++E + +    +P++  YT+L+ G C    +
Sbjct: 553 RGTA-PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNI 611

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +EA    D+  N  + P+   +  L+ CF
Sbjct: 612 EEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 128/277 (46%), Gaps = 7/277 (2%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           L+  S ++  L  +      +  F  + + +     A TY V+I+   R  ++D  + I+
Sbjct: 38  LLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYIL 97

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + MK +G N     +  ++NG+ + G  ++A ++F  +  F  KP    Y  L++     
Sbjct: 98  QQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSE 157

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            +      L   MK+ G   ++ T+NI+L  LC+  +++ A  +  ++   G   +  +Y
Sbjct: 158 NKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTY 217

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LV 476
             +++  C+ G+++ A E     L   F P     N L+  +CK G  E  AI L G ++
Sbjct: 218 TTMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIE-VAIKLLGEMM 271

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           + G  P   S++ ++  +C    +  AF L  ++ ++
Sbjct: 272 DNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308


>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Cucumis sativus]
          Length = 460

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 229/447 (51%), Gaps = 45/447 (10%)

Query: 52  DARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF 111
           + ++R +       ++ +K  K+P  AL +F    E KGF H+  +Y++++ KLAR ++F
Sbjct: 39  NHKQRRKIRERIPFVTDVKEVKDPCEALALFENYHE-KGFKHHYPSYSSLIYKLARSRRF 97

Query: 112 EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST 171
           EAV+ +L  +     + +E +F+ L++H+    L E+ +E+FH++ P      +L++ + 
Sbjct: 98  EAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQM-PSFNCFRTLQSFNV 156

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
            LN L++ +Q   A    + + + +  +PN+  +NI+IK   K+G  E A  +  EM + 
Sbjct: 157 LLNTLVDCDQFSKASEIFQQAYE-MDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEK 215

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  P+++TY++ +  LC+ G    A+ LF+ M  K    P+A+TY +L++G+C  GK  
Sbjct: 216 GVQ-PSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGH-HPNAVTYALLMEGWCFIGKYK 273

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            AKK+M  M+ +GC     NY  LM    K G + E + + +EMK   LKPD + Y  L+
Sbjct: 274 EAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILV 333

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+ G+V +A ++L +M+  GC  +  T+ +++ G C  G             +DG  
Sbjct: 334 NYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGD------------FDG-- 379

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
                                A+++L  ML  G  PH  T   L+V L K    +D    
Sbjct: 380 ---------------------AMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDD--YV 416

Query: 472 LFGLVEM---GFKPESDSWALLVELIC 495
            F L EM     + ++++W +L+  +C
Sbjct: 417 CFVLEEMEKRQLRFDAETWRILIMDVC 443



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 1/276 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N   +  LI    K     + IELF +M S +       ++NVL++      +  +A +I
Sbjct: 115 NETLFVALIQHYGKAHLVEKGIELFHQMPSFN-CFRTLQSFNVLLNTLVDCDQFSKASEI 173

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            +        PN  +Y  ++ G+ K+G  ++A  +FDEM    ++P  + Y + +   CR
Sbjct: 174 FQQAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCR 233

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G +D AL L K M E+G   + VT+ +++ G C  GK +EA  ++  + + G  L   +
Sbjct: 234 KGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVN 293

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +++    + G +++   LL  M  R   P   T N L+  LCK G   DA   L  + 
Sbjct: 294 YGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQ 353

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
             G  P + ++ ++++  C       A ++L+ +++
Sbjct: 354 VGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLM 389



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 139/284 (48%), Gaps = 4/284 (1%)

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K  +  YP   +YS+LI  L ++ RF EA+E     +    I  +   +  LI  + +  
Sbjct: 75  KGFKHHYP---SYSSLIYKLARSRRF-EAVETILGHLRNRNIRCNETLFVALIQHYGKAH 130

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            V++  ++   M +  C   + ++  L+N      +  +A E+F +      +P+++ Y 
Sbjct: 131 LVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYN 190

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            +I  + + G  ++A  L  EM E+G +  +VT+N  LG LCR+G+++ AL + + +   
Sbjct: 191 IMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEK 250

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G + N  +Y +++   C  G+ ++A +L+  M   G          L+  L K G  ++ 
Sbjct: 251 GHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEM 310

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
              L  + +   KP+  ++ +LV  +C+  K+  A+++L ++ +
Sbjct: 311 ESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQV 354


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 218/431 (50%), Gaps = 26/431 (6%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  ++  + R  + + V ++ R+M       +   F  LMK F +CS     L  F KI 
Sbjct: 81  FCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKIT 140

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    P++   ST L+ L   +++  A +       H   KPN   F  L+   C+ G 
Sbjct: 141 KLGFH-PTVVTFSTLLHGLCVEDRISEALDLF-----HQMCKPNVVTFTTLMNGLCREGR 194

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +  A  +L  M +  +  PN ITY T++DG+CK G    A+ L  +M     I P+ + +
Sbjct: 195 VVEAVALLDRMLEDGLQ-PNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIW 253

Query: 278 NV-----LIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
            +     +I+GFC  G+   A++++ E ++    +P+V  Y  L+N F KEGK  EA+E+
Sbjct: 254 PLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEEL 313

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           +DEM    + P TI Y+++I+ FC+  R+D A  +   M  +GC  DI+TFN ++ G CR
Sbjct: 314 YDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCR 373

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             ++++ + +L ++   G+  N  +Y  +++  CQ G+L  A +LL+ M+  G  P+  T
Sbjct: 374 AKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVT 433

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEM------------GFKPESDSWALLVELICRGRK 499
            N LL  LC  G  +D A+ +F  ++             G +P+  ++ +L+  +    K
Sbjct: 434 CNTLLDGLCDNGKLKD-ALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGK 492

Query: 500 LLFAFELLDEL 510
            L A EL +E+
Sbjct: 493 FLEAEELYEEM 503



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 189/370 (51%), Gaps = 13/370 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++   + E+K  + +  TY  +++   +  KF   + +  +M           + +++
Sbjct: 274 AQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMI 333

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F   +  +    MF+ +       P +   +T +     + +VD     L +      
Sbjct: 334 DGFCKQNRLDAAEHMFY-LMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLL-HEMTEAG 391

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  NT  +  LI   C+ G L +A ++L+EM  S +  PN++T +TL+DGLC NG+ ++A
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC-PNVVTCNTLLDGLCDNGKLKDA 450

Query: 258 IELFEEMVSK----------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           +E+F+ M             + + PD  TYN+LI G    GK   A+++ E M + G  P
Sbjct: 451 LEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 510

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y ++++G CK+ +L EA ++FD M +    P+ + +TTLIN +C+AGRVD+ LEL 
Sbjct: 511 DTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 570

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM  RG  A+ +T+  ++ G  + G I  AL + +++   G+Y +  + R +L     K
Sbjct: 571 CEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSK 630

Query: 428 GELEKAIELL 437
            EL++A+ +L
Sbjct: 631 EELKRAVAML 640



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 161/307 (52%), Gaps = 14/307 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS    S+ ++   + N++D A++   Y        P+   FN LI  +C+   ++   +
Sbjct: 324 PSTITYSSMIDGFCKQNRLDAAEHMF-YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIK 382

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM ++ +   N ITY+TLI G C+ G    A +L +EMVS   + P+ +T N L+DG
Sbjct: 383 LLHEMTEAGL-VANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG-VCPNVVTCNTLLDG 440

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L++G   EGK  EA+E++
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  + PDTI Y ++I+  C+  R+DEA ++   M  +    ++VTF  ++ G C+ 
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G++++ L +  ++   GI  N  +Y  +++   + G +  A+++ + M+  G  P   T 
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI 620

Query: 453 NELLVRL 459
             +L  L
Sbjct: 621 RNMLTGL 627



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 190/390 (48%), Gaps = 19/390 (4%)

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC--LNLLIESNQVDLAQNF 188
           G  L L   F      E  +++F  +    R +P    I  C  + +++   ++D+  + 
Sbjct: 44  GESLKLRSGFHEIKGLEDAIDLFGDM---VRSRPLPSVIDFCKLMGVVVRMGRLDVVIS- 99

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L    +  R+  N   F IL+K  C    L  A     ++ K    +P ++T+STL+ GL
Sbjct: 100 LHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGF-HPTVVTFSTLLHGL 158

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C   R  EA++LF +M       P+ +T+  L++G CR G+V  A  +++ M  +G  PN
Sbjct: 159 CVEDRISEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPN 213

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGY-----TTLINCFCRAGRVDE 362
              Y T+++G CK G    A  +  +M+    +KP+ + +     T +IN FC +GR  E
Sbjct: 214 QITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSE 273

Query: 363 ALELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           A +LL+EM ER     D+VT+N ++    +EGK  EA  + +++   GI  +  +Y  ++
Sbjct: 274 AQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMI 333

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C++  L+ A  +  LM  +G  P   T N L+   C+A   +D    L  + E G  
Sbjct: 334 DGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLV 393

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELV 511
             + ++  L+   C+   L  A +LL E+V
Sbjct: 394 ANTITYTTLIHGFCQVGDLNAAQDLLQEMV 423



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 169/329 (51%), Gaps = 17/329 (5%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  TY++++D   +  + +A + +   M  + C      F  L+  +      +R
Sbjct: 320 RGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRA---KR 376

Query: 149 VLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           V +    +H +T        I+  T ++   +   ++ AQ+ L+       + PN    N
Sbjct: 377 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS-GVCPNVVTCN 435

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSY----------PNLITYSTLIDGLCKNGRFRE 256
            L+   C  G L+ A E+ K M+KS+M            P++ TY+ LI GL   G+F E
Sbjct: 436 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLE 495

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A EL+EEM  +  I+PD +TYN +I G C+  ++D A ++ + M +   +PNV  +TTL+
Sbjct: 496 AEELYEEMPHRG-IVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK G++ +  E+F EM    +  + I Y TLI+ F + G ++ AL++ +EM   G  
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKL 405
            D +T   +L GL  + +++ A+ MLE L
Sbjct: 615 PDTITIRNMLTGLWSKEELKRAVAMLEDL 643



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 212/484 (43%), Gaps = 58/484 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ + +      N  T+ T+++ L R  +     A+L +M  +  + ++  +  ++
Sbjct: 167 ALDLFHQMCKP-----NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIV 221

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPS-----LKAISTCLNLLIESNQVDLAQNFLKYS 192
                       L +  K+  ++  KP+     L+  +  +N    S +   AQ  L+  
Sbjct: 222 DGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEM 281

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            +  ++ P+   +N LI    K G    A E+  EM    +  P+ ITYS++IDG CK  
Sbjct: 282 LERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI-IPSTITYSSMIDGFCKQN 340

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           R   A  +F  M +K    PD +T+N LI G+CR  +VD   K++  M   G   N   Y
Sbjct: 341 RLDAAEHMFYLMATKG-CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 399

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK---- 368
           TTL++GFC+ G L  A+++  EM +  + P+ +   TL++  C  G++ +ALE+ K    
Sbjct: 400 TTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459

Query: 369 ------------------------------------------EMKERGCKADIVTFNIIL 386
                                                     EM  RG   D +T+N ++
Sbjct: 460 SKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVI 519

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC++ +++EA  M + +       N  ++  ++N  C+ G ++  +EL   M  RG +
Sbjct: 520 HGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 579

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            +  T   L+    K G    A      ++  G  P++ +   ++  +    +L  A  +
Sbjct: 580 ANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAM 639

Query: 507 LDEL 510
           L++L
Sbjct: 640 LEDL 643


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 178/319 (55%), Gaps = 3/319 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +N+++   CK      A+EVLKEM+  +   P+L+TYST+I+G CK G    A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+  EMV++D + PD +TY  ++DG CR GK+DRA +++  MK  G  P+ F ++ L+ 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER---G 374
           G+C   K+ EA +++ E+     + D +  + LI   CR  R+ EA EL +EM+ R    
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            K D+VT+  ++ G C+ G +E+A+ ML  +       N  +Y  +L+  C+ G+L++A+
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +L R M  +G +P+  T   L+  LC A   + A + +  +       ++ S+  L++  
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 495 CRGRKLLFAFELLDELVIK 513
           CR  ++  A +L  E+  K
Sbjct: 305 CRLGRIEEAKQLFKEMAAK 323



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 223/467 (47%), Gaps = 41/467 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI   +  + G   +  TY +++D L R  K +    ++R+M  +  +  +  F  L+
Sbjct: 64  ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 123

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             + N    +  L+++ +I         L A+S+   +     +  + + +  +    +R
Sbjct: 124 TGWCNARKVDEALKLYKEILT---SSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 198 ----LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
                KP+   +  LI   CK G LE A ++L  M + +   PN++TYS+L+ GLCK G 
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM-EGRKCVPNVVTYSSLLHGLCKAGD 239

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A++LF  M SK  + P+ +TY  LI G C   KVD A+ +M+ M    C  +  +Y 
Sbjct: 240 LDQALDLFRRMTSKGCV-PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN 298

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK-E 372
            L++G+C+ G+++EAK++F EM      PD I YT L+  FC A R++EA  LL+ MK  
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL-- 430
            G   D+VT++I++ G  R  +  EA   ++++    +  N  +Y  +++  C+ G +  
Sbjct: 359 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNH 418

Query: 431 -----------------------------EKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
                                        E+A+ LL  M+ +   P   T N ++  LC+
Sbjct: 419 AMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCR 478

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            G  ++A   L  +   G +P   ++  L+E   R  ++  A+EL +
Sbjct: 479 LGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 525



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 218/441 (49%), Gaps = 13/441 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI-FLNL 136
           A E+   + + K    +  TY+T+++   +  + +    +LR+M        + + + ++
Sbjct: 28  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSV 87

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK-YSNQH 195
           +         +R  EM  ++  +   +P     S  +     + +VD A    K      
Sbjct: 88  VDGLCRDGKMDRACEMVREMK-LKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 146

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLK--EMKKSQMSYPNLITYSTLIDGLCKNGR 253
            RL  +    + LI   C+   +  A+E+ +  EM++     P+++TY+ LIDG CK+G 
Sbjct: 147 CRL--DAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGN 204

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+++   M  + + +P+ +TY+ L+ G C+ G +D+A  +   M + GC PNV  YT
Sbjct: 205 LEKAMKMLGVMEGR-KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 263

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL++G C   K+  A+ + DEM       DT+ Y  L++ +CR GR++EA +L KEM  +
Sbjct: 264 TLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAK 323

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEK 432
            C  D +T+  ++ G C   ++EEA  +LE +    GI  +  +Y IV+    +     +
Sbjct: 324 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVE 383

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A E ++ M+ R   P+  T + L+  LCKAG    A   L  +     KP+  ++ +++E
Sbjct: 384 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIE 439

Query: 493 LICRGRKLLFAFELLDELVIK 513
            +C   +   A  LL+E+V K
Sbjct: 440 GLCGTDRTEEALTLLEEMVNK 460



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 218/474 (45%), Gaps = 19/474 (4%)

Query: 36  NTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVS--EQKGFNH 93
           N  K D  ++     + +  R   +S  A I+ +  E+    A E+F  +   E   +  
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKP 187

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           +  TY  ++D   +    E    +L  M    C  +   + +L+         ++ L++F
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            ++       P++   +T ++ L  +++VD A+  +           +T  +N L+  +C
Sbjct: 248 RRMTS-KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC-CPADTVSYNALLDGYC 305

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           + G +E A ++ KEM  ++   P+ ITY+ L+ G C   R  EA  L E M +   I PD
Sbjct: 306 RLGRIEEAKQLFKEMA-AKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TY++++ G+ R  +   A + ++ M      PN   Y++L++G CK G++  A EV  
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK 424

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            +     KPD + YT +I   C   R +EAL LL+EM  +  +  + TFN ++G LCR G
Sbjct: 425 NVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLG 480

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG--------F 445
            ++EA  +L  +   G+     +Y  +L    + G +E A EL  +M  +          
Sbjct: 481 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANL 540

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP-ESDSWALLVELICRGR 498
           +P  A S  L+  LCKA   + A   +  L     +P E D  A++  L+  GR
Sbjct: 541 VPEQAFS-ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGR 593



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 14/312 (4%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           +  +Y  +LD   R  + E    + ++M  ++C      +  L++ F N S  E    + 
Sbjct: 293 DTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
             +       P +   S  +     + +   A  F++       + PN   ++ LI   C
Sbjct: 353 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR-NVAPNAVTYSSLIDGLC 411

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G +  A EVLK + K     P+++TY+ +I+GLC   R  EA+ L EEMV+K ++ P 
Sbjct: 412 KAGRVNHAMEVLKNVDK-----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK-RVEPS 465

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
             T+N +I   CR G +D A K++  M  +G  P +  YTTL+ GF + G+++ A E+F+
Sbjct: 466 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 525

Query: 334 EMKNFLLKPDTIG-------YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            M+    K  +         ++ LI   C+A  +D+A+ +++E++ R C+        I+
Sbjct: 526 VMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIV 585

Query: 387 GGLCREGKIEEA 398
            GL R G+ EEA
Sbjct: 586 DGLLRAGRTEEA 597



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 124/258 (48%), Gaps = 15/258 (5%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +  TY+ ++   +R K+F      +++M       +   + +L+            
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           +E+   +     +KP +   +  +  L  +++ + A   L+    + R++P+   FN +I
Sbjct: 420 MEVLKNV-----DKPDVVTYTIVIEGLCGTDRTEEALTLLE-EMVNKRVEPSVGTFNSVI 473

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C+ G ++ A+++L  M    +  P ++TY+TL++G  + GR   A ELFE M  K +
Sbjct: 474 GALCRLGDMDEAWKLLVAMAAHGLE-PGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAK 532

Query: 270 -------ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
                  ++P+   ++ LI G C+  ++D+A  ++E +++  C P   +   +++G  + 
Sbjct: 533 KSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRA 591

Query: 323 GKLQEAKEVFDEMKNFLL 340
           G+ +EA ++ + +    L
Sbjct: 592 GRTEEAGKLINSISKVGL 609



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE-RGCKADIVTFNIILGGLCREG 393
           M+ F+  P+   Y  ++N  C+A    +A E+LKEM++ +    D+VT++ ++ G C++G
Sbjct: 1   MREFV-APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59

Query: 394 KIEEALGML-EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           +++ A  +L E +  DG+  +  +Y  V++  C+ G++++A E++R M  +G  P   T 
Sbjct: 60  EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           + L+   C A   ++A      ++    + ++ S + L+  +CR R++  A+EL  E+ +
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179

Query: 513 KESG 516
           +E G
Sbjct: 180 REDG 183


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 193/350 (55%), Gaps = 3/350 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS  A ++ ++ L  +N  D A+      N+     P+   +N++I   CKRG LE A +
Sbjct: 43  PSTVAYTSLIHGLCMANSFDDARELFADMNRR-GCPPSPVTYNVMIDASCKRGMLEEACD 101

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++K+M +     P+++TY+T++DGLCK+ R  EA+ LF EM  +    P+  ++N +I G
Sbjct: 102 LIKKMIEDG-HVPDVVTYNTVMDGLCKSSRVEEALLLFNEM-ERLGCTPNRRSHNTIILG 159

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  K+D+A ++   M+     P+ ++Y  L++G  K GKL EA ++F  M +  + P 
Sbjct: 160 LCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPS 219

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  +I+  C A  +DEALEL K M+ +GC+    TFNI++   C+ GK++EA  +L+
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLK 279

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  DG   +  +Y  +++  C    ++ A  LL  M+ R   P   T N L+  LCKAG
Sbjct: 280 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 339

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++A   L  +V  G  P+  ++  LV   CR  +   A ELL ++V +
Sbjct: 340 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 210/432 (48%), Gaps = 20/432 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS------ 141
             G   +   Y +++  L     F+    +   M    C     +  N+M   S      
Sbjct: 38  HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP-VTYNVMIDASCKRGML 96

Query: 142 --NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
              C L ++++E  H         P +   +T ++ L +S++V+ A   L    + L   
Sbjct: 97  EEACDLIKKMIEDGHV--------PDVVTYNTVMDGLCKSSRVEEAL-LLFNEMERLGCT 147

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN    N +I   C++  ++ A +V  EM+   +  P+  +Y  LIDGL K G+  EA +
Sbjct: 148 PNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP-PDSWSYGILIDGLAKAGKLNEAYK 206

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+ M+    I P A+TYNV+I G C    +D A ++ + M++ GC P+ F +  L++  
Sbjct: 207 LFQRMLDSG-ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK GKL EA  +   M +    PD + Y+TLI+  C   RVD+A  LL++M +R CK  +
Sbjct: 266 CKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT N ++ GLC+ G+I+EA  +L+ +   G   +  +Y  +++  C+ G+ E+A ELL  
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P+  T   L+  LCKA    +A      +   G  P   ++  L+   C   +
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445

Query: 500 LLFAFELLDELV 511
           +    +L  E+V
Sbjct: 446 VDGGLKLFGEMV 457



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 194/385 (50%), Gaps = 12/385 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC----KFHEGIFLNLMKHFSNC 143
           + G   +  TY T++D L +  + E    +  +M    C    + H  I L L +     
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ---- 163

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           S  ++  ++FH++       P   +    ++ L ++ +++ A    +       + P+  
Sbjct: 164 SKIDQACQVFHEMEA-KDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS-GITPSAV 221

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N++I   C   TL+ A E+ K M+ S+   P+  T++ LID  CK G+  EA  L + 
Sbjct: 222 TYNVVIHGMCLAYTLDEALELFKSMR-SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKR 280

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M + D  +PD +TY+ LI G C   +VD A+ ++E M    C P V    TL++G CK G
Sbjct: 281 M-TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 339

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +++EA+EV D M +    PD + Y TL++  CRAG+ + A ELL +M  RG   ++VT+ 
Sbjct: 340 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYT 399

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC+  ++ EA G+  ++   G   N  +Y  ++   C  G+++  ++L   M+C 
Sbjct: 400 ALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA 459

Query: 444 GFLPHYATSNELLVRLCKAGMAEDA 468
           G  P +     L   LCK+G +  A
Sbjct: 460 GISPDHVVYGTLAAELCKSGRSARA 484



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 216/470 (45%), Gaps = 60/470 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +FN + E+ G   N  ++ TI+  L +  K +    V  +M  +        +  L+
Sbjct: 134 ALLLFNEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
              +         ++F ++    IT   PS    +  ++ +  +  +D A    K S + 
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGIT---PSAVTYNVVIHGMCLAYTLDEALELFK-SMRS 248

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC------ 249
              +P+   FNILI  HCKRG L+ AF +LK M       P+++TYSTLI GLC      
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG-HVPDVVTYSTLISGLCSIARVD 307

Query: 250 -----------------------------KNGRFREAIELFEEMVSKDQILPDALTYNVL 280
                                        K GR +EA E+ + MVS  Q  PD +TYN L
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS-PDVVTYNTL 366

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           + G CR G+ +RA++++  M   G  PNV  YT L++G CK  +L EA  VF +MK+   
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P+   YT LI  FC AG+VD  L+L  EM   G   D V +  +   LC+ G+   AL 
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 486

Query: 401 ML--------EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           +L         + W D +Y      R  ++   + G++E A+  +R M+  G LP     
Sbjct: 487 ILREGRESLRSEAWGDEVY------RFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERC 540

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEM--GFKPESDSWALLVELICRGRKL 500
             L+  LCK+G   +A   L  ++++  G K    +   + E++ +G ++
Sbjct: 541 ASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVEEMVGKGYEI 590



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 221/434 (50%), Gaps = 9/434 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F  ++ ++G   +  TY  ++D   +    E    ++++M  +        +  +M
Sbjct: 64  ARELFADMN-RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHL 196
                 S  E  L +F+++  +    P+ ++ +T +  L + +++D A Q F +   + +
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
              P++  + ILI    K G L  A+++ + M  S ++ P+ +TY+ +I G+C      E
Sbjct: 182 --PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGIT-PSAVTYNVVIHGMCLAYTLDE 238

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ELF+ M SK    P   T+N+LID  C+ GK+D A ++++ M ++G  P+V  Y+TL+
Sbjct: 239 ALELFKSMRSKG-CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G C   ++ +A+ + ++M     KP  +   TLI+  C+AGR+ EA E+L  M   G  
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+VT+N ++ G CR G+ E A  +L  +   G+  N  +Y  +++  C+   L +A  +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELIC 495
              M   G  P+  T   L++  C AG   D  + LFG +V  G  P+   +  L   +C
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQV-DGGLKLFGEMVCAGISPDHVVYGTLAAELC 476

Query: 496 RGRKLLFAFELLDE 509
           +  +   A E+L E
Sbjct: 477 KSGRSARALEILRE 490



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 176/317 (55%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P++  + ILI    K G L  A  + +++  S ++ P+ + Y++LI GLC    F +A
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT-PSTVAYTSLIHGLCMANSFDDA 64

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF +M ++    P  +TYNV+ID  C+ G ++ A  +++ M  +G  P+V  Y T+M+
Sbjct: 65  RELFADM-NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK  +++EA  +F+EM+     P+   + T+I   C+  ++D+A ++  EM+ +    
Sbjct: 124 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  ++ I++ GL + GK+ EA  + +++   GI  +  +Y +V++  C    L++A+EL 
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M  +G  P   T N L+   CK G  ++A   L  + + G  P+  +++ L+  +C  
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 498 RKLLFAFELLDELVIKE 514
            ++  A  LL+++V ++
Sbjct: 304 ARVDDARHLLEDMVKRQ 320



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 114/212 (53%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M     +P+ ++Y  L++G  K GKL +A+ +F ++ +  + P T+ YT+LI+  C A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            D+A EL  +M  RGC    VT+N+++   C+ G +EEA  +++K+  DG   +  +Y  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V++  C+   +E+A+ L   M   G  P+  + N +++ LC+    + A      +    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
             P+S S+ +L++ + +  KL  A++L   ++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRML 212


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 242/485 (49%), Gaps = 25/485 (5%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           KAD  V+     + +R     I      S I   K+ +  L +   + E KG  H+  T 
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM-ESKGIAHSIYTL 126

Query: 99  ATILDKLARYKK----FEAVDAVLRQMTYETCKFHEGIFLNLM----KHFSNCSLHERVL 150
           + +++   R +K    F  +  +++ + YE         LN +    +      L +R++
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMK-LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
           EM HK        P+L  ++T +N L  + +V  A   +    +    +PN   +  ++ 
Sbjct: 186 EMGHK--------PTLITLNTLVNGLCLNGKVSDAVVLIDRMVET-GFQPNEVTYGPVLN 236

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             CK G    A E+L++M++  +   + + YS +IDGLCK+G    A  LF EM  K   
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GF 294

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
             D +TYN LI GFC  G+ D   K++  M     +PNV  ++ L++ F KEGKL+EA +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  EM    + P+TI Y +LI+ FC+  R++EA++++  M  +GC  DI+TFNI++ G C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           +  +I++ L +  ++   G+  N  +Y  ++   CQ G+LE A +L + M+ R   P   
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD--SWALLVELICRGRKLLFAFELLD 508
           +   LL  LC  G  E  A+ +FG +E   K E D   + +++  +C   K+  A++L  
Sbjct: 475 SYKILLDGLCDNGELE-KALEIFGKIEKS-KMELDIGIYMIIIHGMCNASKVDDAWDLFC 532

Query: 509 ELVIK 513
            L +K
Sbjct: 533 SLPLK 537



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 214/426 (50%), Gaps = 8/426 (1%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K    V   D  V+   +   +++G  ++++    +   A+E+   + E++    +   Y
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKY 266

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
           + I+D L +    +    +  +M  +  K     +  L+  F N    +   ++   +  
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM-- 324

Query: 159 ITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           I R+  P++   S  ++  ++  ++  A   LK   Q   + PNT  +N LI   CK   
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENR 383

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           LE A +++ ++  S+   P+++T++ LI+G CK  R  + +ELF EM S   ++ + +TY
Sbjct: 384 LEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLRGVIANTVTY 441

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N L+ GFC+ GK++ AKK+ + M +    P++ +Y  L++G C  G+L++A E+F +++ 
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             ++ D   Y  +I+  C A +VD+A +L   +  +G K D   +NI++  LCR+  + +
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +  K+  +G   ++ +Y I++       +   A EL+  M   GF P   ++ ++++
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVI 620

Query: 458 RLCKAG 463
            +  +G
Sbjct: 621 NMLSSG 626



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 111/227 (48%)

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
           G K D A  +   M  +   P V ++  L +   K  + +    +  +M++  +      
Sbjct: 66  GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
            + +INCFCR  ++  A   + ++ + G + D V FN +L GLC E ++ EAL +++++ 
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G      +   ++N  C  G++  A+ L+  M+  GF P+  T   +L  +CK+G   
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            A   L  + E   K ++  ++++++ +C+   L  AF L +E+ IK
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 187/351 (53%), Gaps = 3/351 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP++ A +T ++ L +   V  A +F     +   + P+   ++ ++   C  G +  A 
Sbjct: 77  KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKE-GIPPDVFTYSSILHGFCNLGRVNEAT 135

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + K+M +  +  PN +T++ LIDGLCK     EA  +FE M  K  + PD  TYN L+D
Sbjct: 136 SLFKQMVERNV-IPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG-LEPDVYTYNALVD 193

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+C   ++D A+K+   M   GC PNV +Y  L+NG CK G++ EAK +  EM +  L P
Sbjct: 194 GYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTP 253

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y+TL+  FC+ GR  EA ELLKEM   G   +++T++I+L GLC+ G ++EA  +L
Sbjct: 254 DIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELL 313

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +    I  N   Y I++   C  G+LE A EL   +  +G  P   T   ++  L K 
Sbjct: 314 KAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKG 373

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           G++ +A      +   G  P S ++ ++++   R      A  L++E+V K
Sbjct: 374 GLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 218/418 (52%), Gaps = 9/418 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+ + +  G   +  TY+TI++ L +         +L++M  + CK +   +  ++
Sbjct: 29  AVKLFDEMVKM-GHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTII 87

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                  L    ++ F ++    +E   P +   S+ L+      +V+ A +  K   + 
Sbjct: 88  DSLCKDRLVTEAMDFFSEM---VKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER 144

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             + PN   F ILI   CK+  +  A+ V + M +  +  P++ TY+ L+DG C   +  
Sbjct: 145 -NVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE-PDVYTYNALVDGYCSRSQMD 202

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA +LF  M  +    P+  +YN+LI+G C+ G++D AK ++  M +    P++F Y+TL
Sbjct: 203 EAQKLFNIM-DRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTL 261

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M GFC+ G+ QEA+E+  EM ++ L P+ I Y+ +++  C+ G +DEA ELLK M+E   
Sbjct: 262 MRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKI 321

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + +I  + I++ G+C  GK+E A  +   L+  GI     +Y ++++   + G   +A E
Sbjct: 322 EPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACE 381

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           L R M   G LP+  T N ++    + G   +A   +  +V  GF  +S ++ +L +L
Sbjct: 382 LFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDL 439



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 177/352 (50%), Gaps = 35/352 (9%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-----SQMSY--------------- 235
           L L+P    FN L+   C +  +  A ++  EM K       ++Y               
Sbjct: 4   LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63

Query: 236 --------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
                         PN++ Y+T+ID LCK+    EA++ F EMV K+ I PD  TY+ ++
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMV-KEGIPPDVFTYSSIL 122

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            GFC  G+V+ A  + + M      PN   +T L++G CK+  + EA  VF+ M    L+
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD   Y  L++ +C   ++DEA +L   M  +GC  ++ ++NI++ G C+ G+I+EA G+
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L ++ +  +  +  +Y  ++   CQ G  ++A ELL+ M   G LP+  T + +L  LCK
Sbjct: 243 LAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCK 302

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G  ++A   L  + E   +P    + +L+E +C   KL  A EL   L +K
Sbjct: 303 HGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK 354



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 73/142 (51%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M + G +  +VTFN +L GLC + KI +A+ + +++   G   +  +Y  ++N  C+ G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
              A++LL+ M  +G  P+    N ++  LCK  +  +A      +V+ G  P+  +++ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 490 LVELICRGRKLLFAFELLDELV 511
           ++   C   ++  A  L  ++V
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMV 142


>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 261/525 (49%), Gaps = 31/525 (5%)

Query: 13  RFSSFSTSSSSLPWI--SPLEVIKANTPKADPPVETSDTCVDARKRSRF----------- 59
           RF   S  +S L +    P E  + + P++    +T+ T  +      F           
Sbjct: 16  RFIPISIFNSHLRYFCSDPQEQPQNSRPRSRNASKTAKTIANLINSKPFSNGLLSSLLIT 75

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL- 118
           IS    +  ++  K+P  AL  F   ++QKGF+H   +Y  +L+ L R +        L 
Sbjct: 76  ISKTTVLRTLRLIKDPSKALRFFKW-TQQKGFSHTPESYFIMLEILGRERNLNVARNFLF 134

Query: 119 --RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
              + +  T K  +  F +L++ ++   L +  +++F  +  I    PS+   ++ +++L
Sbjct: 135 SIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVS-PSVVTFNSLMSIL 193

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           ++  + ++A+           + P+TC +N+LI+  CK   ++  F   +EM+       
Sbjct: 194 LKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCD-A 252

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK-DQILPDALTYNVLIDGFCRGGKVDRAKK 295
           +++TY+TL+DGLC+ G+ R A  L   M  K + + P+ +TY  LI G+C   +V+ A  
Sbjct: 253 DVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALV 312

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK-NFLLKPDTIGYTTLINCF 354
           ++E M + G  PN+  Y TL+ G C+  KL + K+V + MK +    PDT  + T+I+  
Sbjct: 313 VLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLH 372

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C AG +DEAL++ + MK+    AD  +++ ++  LC++G  + A  + ++L+   I L+K
Sbjct: 373 CCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSK 432

Query: 415 -------ASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PHYATSNELLVRLCKAGMAE 466
                  ASY  +    C+ G+ +KA  ++R ++ RG   P   T+  +++  CK G  E
Sbjct: 433 FGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTT--VIMGHCKEGAYE 490

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                L  ++   F P+ + +  L++   +  K L A E L++++
Sbjct: 491 SGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKML 535



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 147/278 (52%), Gaps = 5/278 (1%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EF 299
           +++LI    + G F+E+++LF+ M S   + P  +T+N L+    + G+ + AK++  E 
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSI-AVSPSVVTFNSLMSILLKRGRTNMAKEVYDEM 209

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +   G +P+   Y  L+ GFCK   + E    F EM++F    D + Y TL++  CRAG+
Sbjct: 210 LGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGK 269

Query: 360 VDEALELLKEMKER--GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           V  A  L+  M ++  G   ++VT+  ++ G C + ++EEAL +LE++   G+  N  +Y
Sbjct: 270 VRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITY 329

Query: 418 RIVLNFSCQKGELEKAIELL-RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
             ++   C+  +L+K  ++L R+    GF P   T N ++   C AG  ++A      + 
Sbjct: 330 NTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMK 389

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +     +S S++ L+  +C+      A +L DEL  KE
Sbjct: 390 KFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKE 427



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 213/452 (47%), Gaps = 36/452 (7%)

Query: 80  EIFNTVSEQKGFN--HNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E F    E + FN   +  TY T++D L R  K      + R +     K  EG+  N++
Sbjct: 237 EGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVR----IARNLVNGMGKKCEGLNPNVV 292

Query: 138 KHFS---NCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
            + +      + + V E    +  +T    KP++   +T +  L E++++D  ++ L+  
Sbjct: 293 TYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERM 352

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                  P+T  FN +I  HC  G L+ A +V + MKK ++   +  +YSTLI  LC+ G
Sbjct: 353 KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIP-ADSASYSTLIRSLCQKG 411

Query: 253 RFREAIELFEEMVSKDQIL------PDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGC 305
            +  A +LF+E+  K+ +L      P A +YN + +  C  GK  +A++++ + MK    
Sbjct: 412 DYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ 471

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           +P   +YTT++ G CKEG  +   E+   M  ++FL  PD   Y  LI+ F +  +   A
Sbjct: 472 DPQ--SYTTVIMGHCKEGAYESGYELLMWMLRRDFL--PDIEIYDYLIDGFLQKDKPLLA 527

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEA----LGMLEKLWYDGIYLNKASYRI 419
            E L++M +   +    T++ +L  L  +G   E+    + MLEK     I L+  S ++
Sbjct: 528 KETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQL 587

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +      + + E+A E++ L+   G+   Y    E+   L K G   +A   L   +E  
Sbjct: 588 LFG----REQHERAFEIINLLYKNGY---YVKIEEVAQFLLKRGKLSEACKLLLFSLENH 640

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
              + D     +  +C+  K+  AF L  ELV
Sbjct: 641 QNVDIDLCNATILNLCKINKVSEAFSLCYELV 672



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 36/234 (15%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  +I  HCK G  ES +E+L  M +     P++  Y  LIDG  +  +   A E  E+M
Sbjct: 476 YTTVIMGHCKEGAYESGYELLMWMLRRDF-LPDIEIYDYLIDGFLQKDKPLLAKETLEKM 534

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV--------------- 309
           + K    P   T++ ++      G    +  ++  M       N+               
Sbjct: 535 L-KSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQ 593

Query: 310 ----FNYTTLM--NGF-----------CKEGKLQEA-KEVFDEMKNFLLKPDTIGYTTLI 351
               F    L+  NG+            K GKL EA K +   ++N       +   T++
Sbjct: 594 HERAFEIINLLYKNGYYVKIEEVAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATIL 653

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
           N  C+  +V EA  L  E+ E G   ++   + ++  L   GK EEA  + ++L
Sbjct: 654 N-LCKINKVSEAFSLCYELVENGLHQELTCLDDLIAALEEGGKREEAAFISKRL 706


>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g07740, mitochondrial-like [Cucumis sativus]
          Length = 460

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 224/433 (51%), Gaps = 45/433 (10%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           ++ +K  K+P  AL +F    E KGF H+  +Y++++ KLAR ++FEAV+ +L  +    
Sbjct: 53  VTDVKEVKDPCEALALFENYHE-KGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRN 111

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
            + +E +F+ L++H+    L E+ +E+FH++ P      +L++ +  LN L++ +Q   A
Sbjct: 112 IRCNETLFVALIQHYGKAHLVEKGIELFHQM-PSFNCFRTLQSFNVLLNTLVDCDQFSKA 170

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
               + + + +  +PN+  +NI+IK   K+G  E A  +  EM +  +  P+++TY++ +
Sbjct: 171 SEIFQQAYE-MGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQ-PSVVTYNSXL 228

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
             LC+ G    A+ LF+ M  K    P+A+TY +L++G+C  GK   AKK+M  M+ +GC
Sbjct: 229 GVLCRKGEMDTALCLFKNMTEKGH-HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGC 287

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
                NY  LM    K G + E + + +EMK   LKPD + Y  L+N  C+ G+V +A +
Sbjct: 288 KLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYK 347

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           +L +M+  GC  +  T+ +++ G C  G             +DG                
Sbjct: 348 VLVKMQVGGCDPNAATYRMMIDGYCNAGD------------FDG---------------- 379

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM---GFKP 482
                  A+++L  ML  G  PH  T   L+V L K    +D     F L EM     + 
Sbjct: 380 -------AMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDD--YVCFVLEEMEKRQLRF 430

Query: 483 ESDSWALLVELIC 495
           ++++W +L+  +C
Sbjct: 431 DAETWRILIMDVC 443



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 1/276 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N   +  LI    K     + IELF +M S +       ++NVL++      +  +A +I
Sbjct: 115 NETLFVALIQHYGKAHLVEKGIELFHQMPSFN-CFRTLQSFNVLLNTLVDCDQFSKASEI 173

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            +     G  PN  +Y  ++ G+ K+G  ++A  +FDEM    ++P  + Y + +   CR
Sbjct: 174 FQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCR 233

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G +D AL L K M E+G   + VT+ +++ G C  GK +EA  ++  + + G  L   +
Sbjct: 234 KGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVN 293

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +++    + G +++   LL  M  R   P   T N L+  LCK G   DA   L  + 
Sbjct: 294 YGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQ 353

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
             G  P + ++ ++++  C       A ++L+ +++
Sbjct: 354 VGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLM 389



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 139/284 (48%), Gaps = 4/284 (1%)

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K  +  YP   +YS+LI  L ++ RF EA+E     +    I  +   +  LI  + +  
Sbjct: 75  KGFKHHYP---SYSSLIYKLARSRRF-EAVETILGHLRNRNIRCNETLFVALIQHYGKAH 130

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            V++  ++   M +  C   + ++  L+N      +  +A E+F +      +P+++ Y 
Sbjct: 131 LVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYN 190

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            +I  + + G  ++A  L  EM E+G +  +VT+N  LG LCR+G+++ AL + + +   
Sbjct: 191 IMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEK 250

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G + N  +Y +++   C  G+ ++A +L+  M   G          L+  L K G  ++ 
Sbjct: 251 GHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEM 310

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
              L  + +   KP+  ++ +LV  +C+  K+  A+++L ++ +
Sbjct: 311 ESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQV 354



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/170 (18%), Positives = 71/170 (41%)

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +F+       K     Y++LI    R+ R +    +L  ++ R  + +   F  ++
Sbjct: 64  EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
               +   +E+ + +  ++     +    S+ ++LN      +  KA E+ +     GF 
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           P+  + N ++    K G  E A      ++E G +P   ++   + ++CR
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCR 233


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 182/309 (58%), Gaps = 5/309 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++  +C  G L++A  ++ EM       P+  TY+TLI GLC  GR   A+ + +EM
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMPVE----PDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + + + +PD +TY +L++  C+     +A K+++ M++ GC P++  Y  ++NG C+EG+
Sbjct: 59  LRR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A E    + ++  +P+T+ Y  ++   C A R ++A EL+ EM ++GC  ++VTFN+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR+G +E AL +LE++   G   N  SY  +L+  C++ +++KA+  L LM+ RG
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   + N LL  LC++G  + A   L  L + G  P   S+  +++ + +  K   A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 505 ELLDELVIK 513
           ELL+E+V K
Sbjct: 298 ELLNEMVSK 306



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 184/327 (56%), Gaps = 4/327 (1%)

Query: 187 NFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           N L   ++ LR +  P+   + IL++  CKR   + A ++L EM+    + P+++TY+ +
Sbjct: 50  NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT-PDIVTYNVV 108

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           ++G+C+ GR  +AIE  + + S     P+ ++YN+++ G C   + + A+++M  M   G
Sbjct: 109 VNGICQEGRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 167

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C PNV  +  L++  C++G ++ A EV +++  +   P+++ Y  L++ FC+  ++D+A+
Sbjct: 168 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 227

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
             L  M  RGC  DIV++N +L  LCR G+++ A+ +L +L   G      SY  V++  
Sbjct: 228 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
            + G+ ++A+ELL  M+ +G  P   T + +   LC+    EDA  A   + +MG +P +
Sbjct: 288 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 347

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
             +  ++  +C+ R+   A +L   ++
Sbjct: 348 VLYNAIILGLCKRRETHSAIDLFAYMI 374



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 171/312 (54%), Gaps = 4/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+++   C+ G ++ A E LK +  S    PN ++Y+ ++ GLC   R+ +A E
Sbjct: 100 PDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEE 158

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  K    P+ +T+N+LI   CR G V+ A +++E +   GC PN  +Y  L++ F
Sbjct: 159 LMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 217

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ K+ +A    D M +    PD + Y TL+   CR+G VD A+ELL ++K++GC   +
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 277

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++ GL + GK +EAL +L ++   G+  +  +Y  +    C++  +E AI     
Sbjct: 278 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 337

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGR 498
           +   G  P+    N +++ LCK      +AI LF  ++  G  P   ++ +L+E +    
Sbjct: 338 VQDMGIRPNTVLYNAIILGLCKR-RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 396

Query: 499 KLLFAFELLDEL 510
            +  A +LLDEL
Sbjct: 397 LIKEARDLLDEL 408



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 129/237 (54%), Gaps = 3/237 (1%)

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           + YN ++ G+C  G++D A++++  M      P+ + Y TL+ G C  G+   A  V DE
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M      PD + YT L+   C+     +A++LL EM+++GC  DIVT+N+++ G+C+EG+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +++A+  L+ L   G   N  SY IVL   C     E A EL+  M  +G  P+  T N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           L+  LC+ G+ E A   L  + + G  P S S+  L+   C+ +K+  A   LD +V
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 234



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 4/296 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  +Y  +L  L   +++E  + ++ +M  + C  +   F  L+       L E  
Sbjct: 132 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 191

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           LE+  +I P     P+  + +  L+   +  ++D A  FL          P+   +N L+
Sbjct: 192 LEVLEQI-PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLL 249

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C+ G ++ A E+L ++K    + P LI+Y+T+IDGL K G+ +EA+EL  EMVSK  
Sbjct: 250 TALCRSGEVDVAVELLHQLKDKGCA-PVLISYNTVIDGLTKAGKTKEALELLNEMVSKG- 307

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + PD +TY+ +  G CR  +++ A +    +++ G  PN   Y  ++ G CK  +   A 
Sbjct: 308 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 367

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           ++F  M      P+   YT LI      G + EA +LL E+  R  +  ++  ++I
Sbjct: 368 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLI 423


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 222/427 (51%), Gaps = 14/427 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAV-----LRQMTYETCKFHEGIFLNLMKHFSNCS 144
           G   N+ T++T+L+ L+   K + +DAV     + +M YE         +N +    + +
Sbjct: 42  GLQPNHVTFSTLLNGLS--SKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTT 99

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           +  ++L+   +       KP++   ST ++ L +   +  A  FL     +  + PN   
Sbjct: 100 MAIQLLKKMEE----KGCKPNVVVYSTIIDSLCKDKLITEAMEFLS-EMVNRGISPNVVT 154

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ ++   C  G    A  + K+M +  +  P+ +T++ L+DGL K G   EA  +FE M
Sbjct: 155 YSSILHGFCNLGRSNEATSLFKQMVERNV-MPDTVTFNILVDGLSKEGMILEAQCVFETM 213

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K  + P+  TYN L+DG+C   ++D A+K+   M   GC P+V +Y  L+ G CK G+
Sbjct: 214 IEKG-VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR 272

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EAK +  EM +  L PDT+ Y+TL+  FC+ GR  +A +LL+EM+  G   D++T++I
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSI 332

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L GLC++G ++EA  +L+ +    I  N   Y I++   C  G+LE A EL   +  +G
Sbjct: 333 VLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG 392

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T   ++  L K G++ +A      +   G  P S ++ ++++   R      A 
Sbjct: 393 IQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAG 452

Query: 505 ELLDELV 511
            L++E+V
Sbjct: 453 RLIEEMV 459



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 221/420 (52%), Gaps = 7/420 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+ + +  G+  +  TY+TI++ L +         +L++M  + CK +  ++  ++
Sbjct: 66  AVKLFDEMVKM-GYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
                  L    +E   ++  + R   P++   S+ L+      + + A +  K   +  
Sbjct: 125 DSLCKDKLITEAMEFLSEM--VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER- 181

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+T  FNIL+    K G +  A  V + M +  +  PN+ TY+ L+DG C   +  E
Sbjct: 182 NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVE-PNVNTYNALMDGYCSQSQMDE 240

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A +LF  MV K    P   +YN+LI G C+ G++D AK ++  M +    P+   Y+TLM
Sbjct: 241 AQKLFNIMVRKG-CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLM 299

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            GFC++G+ Q+A+++ +EM+++ L PD + Y+ +++  C+ G +DEA ELLK M+E   +
Sbjct: 300 KGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIE 359

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +I  + I++ G+C  GK+E A  +   L+  GI  +  +Y ++++   + G   +A EL
Sbjct: 360 PNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACEL 419

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            R M   G LP+  T N ++    + G   +A   +  +V  GF  +S ++ +L +L  R
Sbjct: 420 FRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 190/353 (53%), Gaps = 7/353 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLES 220
           +P+    ST LN L    ++  A   +K  ++ +++  +P+   ++ +I   CK G+   
Sbjct: 44  QPNHVTFSTLLNGLSSKAKIIDA---VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTM 100

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A ++LK+M++     PN++ YST+ID LCK+    EA+E   EMV++  I P+ +TY+ +
Sbjct: 101 AIQLLKKMEEKGCK-PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRG-ISPNVVTYSSI 158

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           + GFC  G+ + A  + + M      P+   +  L++G  KEG + EA+ VF+ M    +
Sbjct: 159 LHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           +P+   Y  L++ +C   ++DEA +L   M  +GC   + ++NI++ G C+ G+I+EA G
Sbjct: 219 EPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKG 278

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +L ++ +  +  +  +Y  ++   CQ G  + A +LL  M   G LP   T + +L  LC
Sbjct: 279 LLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLC 338

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           K G  ++A   L  + E   +P    + +L++ +C   KL  A EL   L +K
Sbjct: 339 KQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVK 391



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 131/246 (53%), Gaps = 2/246 (0%)

Query: 270 ILPDALTYNVLIDGFCRGGK--VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           I PD  T  +LI+ FC         A  ++  M   G  PN   ++TL+NG   + K+ +
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++FDEM     +PD I Y+T+IN  C+ G    A++LLK+M+E+GCK ++V ++ I+ 
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            LC++  I EA+  L ++   GI  N  +Y  +L+  C  G   +A  L + M+ R  +P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N L+  L K GM  +A      ++E G +P  +++  L++  C   ++  A +L 
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 508 DELVIK 513
           + +V K
Sbjct: 246 NIMVRK 251


>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 236/473 (49%), Gaps = 51/473 (10%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           + +PP  ++      RKR  F++       +K  ++P  AL +FN   +Q GF H+  +Y
Sbjct: 76  RREPPHRSTSRL---RKRIPFLAD------LKSVQDPDDALSLFNQY-QQMGFKHDYPSY 125

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
           + ++ KLAR + FEAV+ +L  +     +  E +F+ L++H+    + E+ +E+F ++ P
Sbjct: 126 SALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAVELFQRM-P 184

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
                 +L + +T LN+L+E+++   A      S + +  + N+  FNI+IK    +G  
Sbjct: 185 SFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTK-MGFRRNSISFNIIIKGWLGKGEW 243

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           + A++V +EM   ++  P ++T+++LI  LC  G    A+ L E+M+ K    P+A+TY 
Sbjct: 244 DKAWQVFEEMIDKEVK-PTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRH-RPNAVTYA 301

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           +L++G C  GK   AKK+M  M   GC P + N+  LM+   + G++ ++K +  EMK  
Sbjct: 302 LLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRR 361

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
             KPD + Y  LIN  C+ GR  EA ++L EM+  GC+ +  T+ +++ G          
Sbjct: 362 RFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGF--------- 412

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
                                     CQ  + E  +++L  ML  G  P   +  +L+V 
Sbjct: 413 --------------------------CQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVG 446

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           L K G  + A   L  + +   +   ++W  LV+  C G +   A  L+ ELV
Sbjct: 447 LLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDR--GAGGLVRELV 497



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 139/278 (50%), Gaps = 4/278 (1%)

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           YP   +YS L+  L ++  F EA+E   + +    I      +  LI  + +    ++A 
Sbjct: 122 YP---SYSALVYKLARSRNF-EAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAV 177

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           ++ + M +  C+  + ++ TL+N   +  +  +A  +FD       + ++I +  +I  +
Sbjct: 178 ELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGW 237

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
              G  D+A ++ +EM ++  K  +VTFN ++G LC +G ++ A+G+LE +       N 
Sbjct: 238 LGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNA 297

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y +++   C  G+ ++A +++  M  +G  P       L+  L + G  +D+   L  
Sbjct: 298 VTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLE 357

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           +    FKP+  ++ +L+  +C+  + L A+++L E+ +
Sbjct: 358 MKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQV 395


>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 230/461 (49%), Gaps = 49/461 (10%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           + +PP  ++      RKR  F++       +K  ++P  AL +FN   +Q GF H+  +Y
Sbjct: 438 RREPPHRSTSRL---RKRIPFLAD------LKSVQDPDDALSLFNQY-QQMGFKHDYPSY 487

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
           + ++ KLAR + FEAV+ +L  +     +  E +F+ L++H+    + E+ +E+F ++ P
Sbjct: 488 SALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAVELFQRM-P 546

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
                 +L + +T LN+L+E+++   A      S + +  + N+  FNI+IK    +G  
Sbjct: 547 SFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTK-MGFRRNSISFNIIIKGWLGKGEW 605

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           + A++V +EM   ++  P ++T+++LI  LC  G    A+ L E+M+ K    P+A+TY 
Sbjct: 606 DKAWQVFEEMIDKEVK-PTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRH-RPNAVTYA 663

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           +L++G C  GK   AKK+M  M   GC P + N+  LM+   + G++ ++K +  EMK  
Sbjct: 664 LLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRR 723

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
             KPD + Y  LIN  C+ GR  EA ++L EM+  GC+ +  T+ +++ G          
Sbjct: 724 RFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGF--------- 774

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
                                     CQ  + E  +++L  ML  G  P   +  +L+V 
Sbjct: 775 --------------------------CQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVG 808

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           L K G  + A   L  + +   +   ++W  LV+  C G +
Sbjct: 809 LLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDR 849



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 139/278 (50%), Gaps = 4/278 (1%)

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           YP   +YS L+  L ++  F EA+E   + +    I      +  LI  + +    ++A 
Sbjct: 484 YP---SYSALVYKLARSRNF-EAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAV 539

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           ++ + M +  C+  + ++ TL+N   +  +  +A  +FD       + ++I +  +I  +
Sbjct: 540 ELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGW 599

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
              G  D+A ++ +EM ++  K  +VTFN ++G LC +G ++ A+G+LE +       N 
Sbjct: 600 LGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNA 659

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y +++   C  G+ ++A +++  M  +G  P       L+  L + G  +D+   L  
Sbjct: 660 VTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLE 719

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           +    FKP+  ++ +L+  +C+  + L A+++L E+ +
Sbjct: 720 MKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQV 757



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 4/178 (2%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP    F +L+    +RG ++ +  +L EMK+ +   P+++TY+ LI+ LCK GR  EA 
Sbjct: 691 KPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFK-PDVVTYNILINHLCKEGRALEAY 749

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ++  EM       P+A TY +++DGFC+    +   K++  M   G  P + ++  L+ G
Sbjct: 750 KVLVEM-QVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVG 808

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
             K GK+  A  V +EM+   ++     +  L+   C   R   A  L++E+K+   K
Sbjct: 809 LLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDR--GAGGLVRELKQNTTK 864


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 172/298 (57%), Gaps = 2/298 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN  ++N +I   CK   +  AF++  EM    +S P+++TYS LI G C  G+  +A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGIS-PDVVTYSALISGFCILGKLNDA 279

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           I+LF +M+ ++ I PD  T+N+L++ FC+ GK+   K + + M   G  PN   Y +LM+
Sbjct: 280 IDLFNKMILEN-IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMD 338

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C   ++ +AK +F+ M    + PD   Y+ +IN FC+  + DEA+ L KEM  +    
Sbjct: 339 GYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP 398

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT++ ++ GL + G+I  AL +++++   G+     +Y  +L+  C+  +++KAI LL
Sbjct: 399 DVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALL 458

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
             +  +G  P+  T + L+  LC++G  EDA     GL+  G     D++ ++++  C
Sbjct: 459 TKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFC 516



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 173/349 (49%), Gaps = 37/349 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  F  LIK  C +G ++ AF    ++      + + I+Y TLI GLCK G  R A++
Sbjct: 153 PDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHF-DQISYGTLIHGLCKVGETRAALD 211

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L +  V  + + P+ + YN +ID  C+   V+ A  +   M + G +P+V  Y+ L++GF
Sbjct: 212 LLQR-VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGF 270

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C  GKL +A ++F++M    +KPD   +  L+N FC+ G++ E   +   M ++G K + 
Sbjct: 271 CILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF 330

Query: 380 VTFN-----------------------------------IILGGLCREGKIEEALGMLEK 404
           VT+N                                   I++ G C+  K +EA+ + ++
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +    I  +  +Y  +++   + G +  A++L+  M  RG  P   T N +L  LCK   
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQ 450

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + A   L  L + G +P   ++++L++ +C+  KL  A ++ + L++K
Sbjct: 451 VDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVK 499



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 171/348 (49%), Gaps = 29/348 (8%)

Query: 187 NFLKYSNQHLRLKPN------TCIFNILIKHHCKRGTLESAFE---VLKEMKKSQMSY-- 235
           NF+ YS+       N        +FN L++    R T   AFE   +L  + KS+  +  
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLR----RNTTPPAFEFNKILGSLVKSKHYHTV 104

Query: 236 -------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
                        PNL+  + LI+  C+ G    A  +F +++ K   +PD +T+  LI 
Sbjct: 105 LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL-KMGYVPDTITFTTLIK 163

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C  G++ +A    + +   G + +  +Y TL++G CK G+ + A ++   +   L++P
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y T+I+  C+   V+EA +L  EM  +G   D+VT++ ++ G C  GK+ +A+ + 
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF 283

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            K+  + I  +  ++ I++N  C+ G++++   +  +M+ +G  P++ T N L+   C  
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                A      + + G  P+  S+++++   C+ +K   A  L  E+
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 112/239 (46%)

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           ++Y+     F     VD A  +   +      P  F +  ++    K         +  +
Sbjct: 51  ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M+   +KP+ +    LINCFC+ G +  A  +  ++ + G   D +TF  ++ GLC +G+
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           I++A    +K+   G + ++ SY  +++  C+ GE   A++LL+ +      P+    N 
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++  +CK  +  +A      ++  G  P+  +++ L+   C   KL  A +L ++++++
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 5/252 (1%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           +  F+++ + +      KE   A  IFNT++ Q G N +  +Y+ +++   + KKF+   
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA-QGGVNPDIQSYSIMINGFCKIKKFDEAM 385

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            + ++M  +        + +L+   S        L++  ++H      P+++  ++ L+ 
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD-RGVPPTIRTYNSILDA 444

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L + +QVD A   L        ++PN   ++ILIK  C+ G LE A +V + +     + 
Sbjct: 445 LCKIHQVDKAIALLTKLKDK-GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNL 503

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
            N+ TY+ +I G C  G F EA+ L  +M   +  +PDA TY ++I    +  + D A+K
Sbjct: 504 -NVDTYTIMIQGFCVEGLFNEALALLSKM-EDNGCIPDAKTYEIIILSLFKKDENDMAEK 561

Query: 296 IMEFMKNNGCNP 307
           ++  M   G  P
Sbjct: 562 LLREMIARGVRP 573



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 76/170 (44%)

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           K + I Y++    F     VD+A+ L   +  R        FN ILG L +       L 
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           + +K+ + GI  N  +  I++N  CQ G +  A  +   +L  G++P   T   L+  LC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G  + A +    +V +GF  +  S+  L+  +C+  +   A +LL  +
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/216 (20%), Positives = 96/216 (44%), Gaps = 2/216 (0%)

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
           F+  +    N  +Y++    F     + +A  +F+ +      P    +  ++    ++ 
Sbjct: 40  FIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSK 99

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
                L L ++M+ RG K ++V  NI++   C+ G I  A  +  K+   G   +  ++ 
Sbjct: 100 HYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFT 159

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            ++   C KG++++A      ++  GF     +   L+  LCK G    AA+ L   V+ 
Sbjct: 160 TLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR-AALDLLQRVDG 218

Query: 479 GF-KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              +P    +  +++ +C+ + +  AF+L  E++ K
Sbjct: 219 NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK 254


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 231/468 (49%), Gaps = 24/468 (5%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL- 118
           IS      +++    P  A E FN  S + GF H++ +Y  +LD L R          L 
Sbjct: 25  ISKTTFFQVLRFIASPPKAFEFFNWAS-RNGFAHDSRSYFMMLDILGRNGNLNIARNFLF 83

Query: 119 --RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
              + +  + K  +     L++ + N  L    +++F  +   +   PS+   ++ L +L
Sbjct: 84  SIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKS-SGVSPSVITFNSLLLIL 142

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           ++  + ++A +          + P+T  FNILI+  CK   ++  F   KEM +     P
Sbjct: 143 LKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCE-P 201

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKK 295
           +++TY+TL+DGLC+ G+ R A  + + MV K + L PD +TY  L+ G+C   ++D A  
Sbjct: 202 DVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALV 261

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYTTLIN 352
           + E M + G  PN   Y TL+ G C+  K  + KE+       + F+  PDT  Y TL+N
Sbjct: 262 VFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFV--PDTCTYNTLMN 319

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C AG  DEAL++ K+MKE   + D  T+++++  LC+ G  E A  + +KL  + I L
Sbjct: 320 AQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILL 379

Query: 413 NK-------ASYRIVLNFSCQKGELEKAIELLRLMLCRGFL--PHYATSNELLVRLCKAG 463
                    A+Y  + +F C+ G+  KA  + R ++ +G    P Y T   L++  CK G
Sbjct: 380 RDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKT---LIIGHCKEG 436

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             E     L  ++   + P+ +++ LL+    +  + + A++ L+ ++
Sbjct: 437 TFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERML 484



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 168/342 (49%), Gaps = 11/342 (3%)

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L++ F   S+ +     F ++     E P +   +T ++ L  + +V +A N +K   + 
Sbjct: 174 LIRGFCKNSMVDEGFRFFKEMSRFNCE-PDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKK 232

Query: 196 LR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           ++ L P+   +  L++ +C +  ++ A  V +EM    +  PN ITY+TLI GLC+  +F
Sbjct: 233 MKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLK-PNDITYNTLIKGLCEVQKF 291

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +  E+    V     +PD  TYN L++  C  G  D A K+ + MK     P+   Y+ 
Sbjct: 292 DKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSV 351

Query: 315 LMNGFCKEGKLQEAKEVFDEM--KNFLLKPD-----TIGYTTLINCFCRAGRVDEALELL 367
           L+   C+ G  + A+++FD++  ++ LL+ D        Y  + +  C+ G+  +A  + 
Sbjct: 352 LIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVF 411

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           +++ ++G + D  ++  ++ G C+EG  E    +L  +       +  +Y +++N   QK
Sbjct: 412 RQLMKKGTQ-DPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQK 470

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           GE   A + L  ML   +LP  +  + +L  L K   A ++A
Sbjct: 471 GEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESA 512



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 202/452 (44%), Gaps = 28/452 (6%)

Query: 80  EIFNTVSEQKGFN--HNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLN 135
           E F    E   FN   +  TY T++D L R  K      V++ M  +       +  +  
Sbjct: 186 EGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTT 245

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           L++ +      +  L +F ++  ++R  KP+    +T +  L E  + D  +  L  +  
Sbjct: 246 LVRGYCMKQEIDEALVVFEEM--VSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVG 303

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
                P+TC +N L+   C  G  + A ++ K+MK+ ++  P+  TYS LI  LC+ G F
Sbjct: 304 GRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQ-PDSATYSVLIRNLCQRGDF 362

Query: 255 REAIELFEEMVSKDQILPD------ALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNP 307
             A +LF+++  +D +L D         YN + D  C+ GK  +A+++  + MK    +P
Sbjct: 363 ERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDP 422

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
              +Y TL+ G CKEG  +   ++   M      PD   Y  LIN F + G    A + L
Sbjct: 423 P--SYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTL 480

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALG----MLEKLWYDGIYLNKASYRIVLNF 423
           + M +         F+ IL  L +     E+      M+++     I L+  + R++   
Sbjct: 481 ERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFG- 539

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
               G   KA +++ L+   G++       EL+  +C+ G   DA   L   +E G   +
Sbjct: 540 ---SGLRIKAFQIVELLYDNGYM---VDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVD 593

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKES 515
            +   +++E +C+ ++ L AF L   LV K +
Sbjct: 594 INVCNVVIEGLCKMKRPLEAFGLYYMLVEKSN 625



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 173/427 (40%), Gaps = 76/427 (17%)

Query: 41  DPPVETSDTCVDA--RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSE----------- 87
           +P V T +T VD   R     I+H     ++K  K+    +  + T+             
Sbjct: 200 EPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEA 259

Query: 88  --------QKGFNHNNATYATILDKLARYKKFEAVDAVL------RQMTYETCKFHEGIF 133
                    +G   N+ TY T++  L   +KF+ +  +L      R    +TC ++    
Sbjct: 260 LVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYN---- 315

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYS 192
             LM    +    +  L+MF K+  + + +P     S  +  L +    + A Q F K S
Sbjct: 316 -TLMNAQCDAGNFDEALKMFKKMKEL-KVQPDSATYSVLIRNLCQRGDFERAEQLFDKLS 373

Query: 193 NQHLRLKPNTCI-----FNILIKHHCKRGTLESAFEVLKE-MKKSQMSYPNLITYSTLID 246
           ++ + L+ + C      +N +    CK G    A  V ++ MKK     P   +Y TLI 
Sbjct: 374 DEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPP---SYKTLII 430

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G CK G F    +L   M+ +D + PD  TY +LI+GF + G+   A K +E M  +   
Sbjct: 431 GHCKEGTFEAGYKLLLFMLRRDYV-PDFETYVLLINGFLQKGEPILAYKTLERMLKSSYL 489

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEM------KNFLLKPDTI--------------- 345
           P    + ++++   K    +E+      M      +N  L   T+               
Sbjct: 490 PKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQI 549

Query: 346 -------GYTT----LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
                  GY      LI   C+ G++ +A ++L    E+G   DI   N+++ GLC+  +
Sbjct: 550 VELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKR 609

Query: 395 IEEALGM 401
             EA G+
Sbjct: 610 PLEAFGL 616


>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
 gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
          Length = 475

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 213/395 (53%), Gaps = 5/395 (1%)

Query: 44  VETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD 103
           +E SD+  +A  +S   S      LI  + +P  A EIF+  S Q  F H+ ++Y  ++ 
Sbjct: 49  LEPSDSHPNANTKSPIGSPSRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSYLILIL 108

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK 163
           KL R K F  +D +L  +  +       +F  ++  +   +L ++ L++F+ I       
Sbjct: 109 KLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCN- 167

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLESAF 222
           PS K ++  L +L+ S+Q  +   F  + + H   + PNT  +NILI+  C  G +  A+
Sbjct: 168 PSPKHLNGILEILV-SHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAY 226

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  +M K  +  P++ +Y  L+  LC+  +   A++L E+M++K  + PDAL+Y  L++
Sbjct: 227 SLFNQMFKRDV-MPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYV-PDALSYTTLLN 284

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             CR  K+  A K++  MK  GCNP++ +Y T++ GFC+EG+  +A +V ++M++    P
Sbjct: 285 SLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMP 344

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y TL+   C  G  DEA   L+EM  +G        N ++ G C  GKIEEA G++
Sbjct: 345 NLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVV 404

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           E+L   G   +  ++ ++++  C+  +L++  E+L
Sbjct: 405 EELLKHGEAPHTETWVMMVSRICEVDDLQRIGEIL 439



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 35/239 (14%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           PN  +Y  L+  FC  G++  A  +F++M    + PD   Y  L+   CR  +V+ A++L
Sbjct: 204 PNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDL 263

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEA-----------------------LG--- 400
           L++M  +G   D +++  +L  LCR+ K+ EA                       LG   
Sbjct: 264 LEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCR 323

Query: 401 ---------MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
                    +LE +  +G   N  SYR ++   C +G  ++A   L  M+ +GF PH+A 
Sbjct: 324 EGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAV 383

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           SN L+   C  G  E+A   +  L++ G  P +++W ++V  IC    L    E+LD++
Sbjct: 384 SNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKV 442



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 135/294 (45%), Gaps = 7/294 (2%)

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVL 280
           F+        Q SY    +Y  LI  L +   F    +L  ++ SK+  + P   +Y  +
Sbjct: 87  FDYASRQPNFQHSYS---SYLILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSY--I 141

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK-EGKLQEAKEVFDEMKNFL 339
           I+ +      D+A KI   +    CNP+  +   ++      +  ++ A ++F +   + 
Sbjct: 142 INIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYD 201

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P+T  Y  LI  FC  G++  A  L  +M +R    D+ ++ I++  LCR+ ++  A+
Sbjct: 202 VFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAV 261

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +LE +   G   +  SY  +LN  C+K +L +A +LL  M  +G  P     N +++  
Sbjct: 262 DLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGF 321

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           C+ G A DA   L  +   G  P   S+  LV  +C       A   L+E+++K
Sbjct: 322 CREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMK 375



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 2/145 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N +I   C+ G    A +VL++M+ S    PNL++Y TL+ GLC  G F EA  
Sbjct: 309 PDIIHYNTVILGFCREGRAMDACKVLEDME-SNGCMPNLVSYRTLVGGLCDQGMFDEAKS 367

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             EEM+ K    P     N LI GFC  GK++ A  ++E +  +G  P+   +  +++  
Sbjct: 368 HLEEMMMKG-FSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRI 426

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+   LQ   E+ D++K   LK DT
Sbjct: 427 CEVDDLQRIGEILDKVKKVELKGDT 451


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 248/533 (46%), Gaps = 82/533 (15%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R+    H AA+  +K + +P  ALE+FN+   + GF H  +TY  I+ KL  + +FE ++
Sbjct: 3   RTLLPKHVAAV--VKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEME 60

Query: 116 AVLRQMTYETCK-FHEGIFLNLMKH------------------FSNC--SLHER-----V 149
            +L +M         EG ++  MK+                  F NC  S+H       +
Sbjct: 61  KLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNI 120

Query: 150 LEMF------HKIHPITREKPSLKAIST----------------CLNLLIESNQVDLAQN 187
           L  F      HK++   R++     + T                 L LL    ++    N
Sbjct: 121 LVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSN 180

Query: 188 FLKY-----------SNQHLR----------LKPNTCIFNILIKHHCKRGTLESAFEVLK 226
            + Y            + H R          L P+   FN L+   CK+G +  +  +L 
Sbjct: 181 AVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLG 240

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNG---------RFREAIELFEEMVSKDQILPDALTY 277
           ++ K  +  PNL T++  + GLC+ G         R  EA E   +MV+     PD LTY
Sbjct: 241 KVLKRGVC-PNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN-GGFEPDDLTY 298

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N +IDG+C+ G V  A ++++     G  P+ F Y +L+NGFCK+G    A  VF +   
Sbjct: 299 NSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLG 358

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             L+P  + Y TLI    + G +  AL+L+ EM E GC  +I T+N+++ GLC+ G + +
Sbjct: 359 KGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSD 418

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +++     G   +  +Y  +++  C++ +L+ A E++  M  +G  P   T N LL 
Sbjct: 419 ASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLN 478

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LCKAG +E+       + E G  P   ++ ++V+ +C+ +K+  A +LL E+
Sbjct: 479 GLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEM 531



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 177/313 (56%), Gaps = 3/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+   +  LI   CK G  + A  V K+     +  P+++ Y+TLI GL + G    A
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR-PSIVLYNTLIKGLSQQGLILPA 384

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L  EM +++  LP+  TYN++I+G C+ G V  A  +++     GC P++F Y TL++
Sbjct: 385 LQLMNEM-AENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLID 443

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK+ KL  A E+ + M +  + PD I Y TL+N  C+AG+ +E +E+ K M+E+GC  
Sbjct: 444 GYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTP 503

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I+T+NII+  LC+  K+ EA+ +L ++   G+  +  S+  +    C+ G+++ A +L 
Sbjct: 504 NIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLF 563

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICR 496
           R M  +  + H   +  ++V      +  + A+ LF +++  G  P++ ++ ++++  C+
Sbjct: 564 RRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCK 623

Query: 497 GRKLLFAFELLDE 509
              +   ++ L E
Sbjct: 624 MGNITQGYKFLLE 636



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 211/467 (45%), Gaps = 88/467 (18%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  ++ TY +I+D   +    +  + VL+   ++  K  E  + +L+  F      +R 
Sbjct: 290 GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRA 349

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           + +F         K  L                               L+P+  ++N LI
Sbjct: 350 MAVF---------KDGLGK----------------------------GLRPSIVLYNTLI 372

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
           K   ++G +  A +++ EM ++    PN+ TY+ +I+GLCK G   +A  L ++ ++K  
Sbjct: 373 KGLSQQGLILPALQLMNEMAENG-CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG- 430

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             PD  TYN LIDG+C+  K+D A +++  M + G  P+V  Y TL+NG CK GK +E  
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+F  M+     P+ I Y  +++  C+A +V+EA++LL EMK +G K D+V+F  +  G 
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550

Query: 390 CREGKIEEALGMLEKL--WYD----------------------------------GIYLN 413
           C+ G I+ A  +  ++   YD                                  G   +
Sbjct: 551 CKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPD 610

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +YR+V++  C+ G + +  + L   + + F+P   T   +L  LC      +A   + 
Sbjct: 611 NYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIH 670

Query: 474 GLVEMGFKPES------------DSWALLVE-LICRGRKLLFAFELL 507
            +++ G  PE+             +  +LVE L+ +G    + +ELL
Sbjct: 671 LMLQKGIVPETVNTIFEADKKVVAAPKILVEDLLKKGHIAYYTYELL 717



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 112/269 (41%), Gaps = 41/269 (15%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ N +  Q G   +  TY T+L+ L +  K E V  + + M  + C           
Sbjct: 454 ATEMVNRMWSQ-GMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGC----------- 501

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     P++   +  ++ L ++ +V+ A + L    +   
Sbjct: 502 -------------------------TPNIITYNIIVDSLCKAKKVNEAVDLLG-EMKSKG 535

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+   F  L    CK G ++ A+++ + M+K         TY+ ++    +      A
Sbjct: 536 LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMA 595

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK-IMEFMKNNGCNPNVFNYTTLM 316
           ++LF  M       PD  TY V+IDGFC+ G + +  K ++E M+     P++  +  ++
Sbjct: 596 MKLFSVM-KNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFI-PSLTTFGRVL 653

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           N  C + K+ EA  +   M    + P+T+
Sbjct: 654 NCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 49/273 (17%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNL 136
            +EIF  + E+KG   N  TY  I+D L + KK  EAVD +L +M        +G+    
Sbjct: 489 VMEIFKAM-EEKGCTPNIITYNIIVDSLCKAKKVNEAVD-LLGEMK------SKGL---- 536

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
                                     KP + +  T      +   +D A    +   +  
Sbjct: 537 --------------------------KPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            +   T  +NI++    ++  +  A ++   MK S    P+  TY  +IDG CK G   +
Sbjct: 571 DVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCD-PDNYTYRVVIDGFCKMGNITQ 629

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
             +   E + K + +P   T+  +++  C   KV  A  I+  M   G  P   N     
Sbjct: 630 GYKFLLENMEK-RFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTI--- 685

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
             F  + K+  A ++  E    LLK   I Y T
Sbjct: 686 --FEADKKVVAAPKILVED---LLKKGHIAYYT 713


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 239/495 (48%), Gaps = 48/495 (9%)

Query: 61  SHGAAI-SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           ++G+ I  L K  K  Q A E+ + + + +G     A +  ++  L +  +F       +
Sbjct: 32  TYGSLIHGLCKAGKLDQ-AYELLDEMRD-RGIPPGVAVHNGVIKGLCKAGRFGDALGYFK 89

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
            +    C      F  L+         E   ++F  +H  ++  P++   +T +N L + 
Sbjct: 90  TVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKD 149

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            ++D A   L   N+     PN   +++L++  CK G  +  F +L+EM +     P++I
Sbjct: 150 GKLDRAIELLDLMNET-GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ-PDVI 207

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            Y+TL++GLCK+ R  EA+EL + M+ +    P  +TYN L++ FCR  +VDRA ++++ 
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMI-RSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC P+V NY T++ G C++ +L +A+ +  +M      PD I Y+T+I+  C+  R
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326

Query: 360 VDE------ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           VD       A E+L+ MK+ GC  +  T+ +++ GLCR  K ++AL +L ++    +  +
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386

Query: 414 KASYRIVLNFSCQK-----------------------------------GELEKAIELLR 438
            +S+ +V+   C+                                    GE++KA+ +  
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           LM+   F P  AT N +L  LC  G  E+A   + G++     P+  S+  L+  +CR  
Sbjct: 447 LMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 499 KLLFAFELLDELVIK 513
            +  A+EL   +  K
Sbjct: 506 CVEEAYELFQAVEAK 520



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 181/321 (56%), Gaps = 7/321 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FNIL+    K G +E AF++ + M  S    PN++TY+T+I+GLCK+G+   AIE
Sbjct: 98  PDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE 157

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L + M ++    P+ +TY+VL++G C+ G+ D+   +++ M   G  P+V  Y TL+NG 
Sbjct: 158 LLDLM-NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  +L EA E+   M      P  + Y +L+  FCR+ +VD A  L++ M ERGC  D+
Sbjct: 217 CKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDV 276

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG------ELEKA 433
           + +N ++ GLCR+ ++++A  +L+++       +  +Y  +++  C+        +LE A
Sbjct: 277 INYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAA 336

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            E+L +M   G  P+  T   ++  LC+A  ++ A   L  +++    P+  S+++++  
Sbjct: 337 CEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGS 396

Query: 494 ICRGRKLLFAFELLDELVIKE 514
           +C+   L  A+++   +  +E
Sbjct: 397 LCKSHDLDAAYKIFGMMSERE 417



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 202/387 (52%), Gaps = 20/387 (5%)

Query: 142 NCSL--------HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           NC+L        H + +++F +     R  P+     + ++ L ++ ++D A   L    
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE----ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
               + P   + N +IK  CK G    A    K +  ++ + P++IT++ L+D L K+GR
Sbjct: 58  DR-GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCT-PDIITFNILVDALVKSGR 115

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA ++FE M +  Q LP+ +TY  +I+G C+ GK+DRA ++++ M   GC PNV  Y+
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G CK G+  +   +  EM     +PD I Y TL+N  C++ R+DEALEL++ M   
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC   +VT+N ++   CR  +++ A  +++ +   G   +  +Y  V+   C+   L+ A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCK-----AGMAEDAAIALFGLV-EMGFKPESDSW 487
             LL+ M+    +P   T + ++  LCK     A    +AA  +  ++ + G  P + ++
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 488 ALLVELICRGRKLLFAFELLDELVIKE 514
           A+++E +CR RK   A  LL  ++  E
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSE 382



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 226/451 (50%), Gaps = 19/451 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +IF ++        N  TY T+++ L +  K +    +L  M    C  +   +  L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           +         R  + F  +  +TR   +P +   +T LN L +S ++D A   ++   + 
Sbjct: 179 EGLCKAG---RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P    +N L++  C+   ++ AF +++ M +     P++I Y+T+I GLC++ R  
Sbjct: 236 -GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP-PDVINYNTVIAGLCRDARLD 293

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR------AKKIMEFMKNNGCNPNV 309
           +A  L ++MV+  + +PD +TY+ +IDG C+  +VD       A +I+E MK  GC PN 
Sbjct: 294 DAQALLKQMVAA-RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  ++ G C+  K Q+A  +   M +  + PD   ++ +I   C++  +D A ++   
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGM 412

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M ER CK + V +  ++ GL + G++++A+ + E L  +      A+Y  VL+  C  G 
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGR 471

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWA 488
           +E+A+ ++  M+ +   P  A+   L+  LC+    E+ A  LF  VE  GF  E   + 
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEE-AYELFQAVEAKGFAMEVGVYN 530

Query: 489 LLVELICRGRKLLFAFELLDELVIKESGTIQ 519
           +LV  +C+ ++L  A  + ++L+  E+G  Q
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLI--EAGYKQ 559


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 197/378 (52%), Gaps = 17/378 (4%)

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           L  RV E     H I R  P +   +T +N L    +V  A   L    ++  L+P+   
Sbjct: 163 LDHRVSEALDLFHQICR--PDVLTFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQIT 219

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +   +   CK G   SA  +L++M++     PN++ YS +IDGLCK+GR  ++  LF EM
Sbjct: 220 YGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM 279

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  I P+ +TYN +I GFC  G+   A+++++ M     +PNV  Y  L+N F KEGK
Sbjct: 280 QDK-GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             EA E++DEM    + P+TI Y ++I+ FC+  R+D A ++   M  +GC  D+ TF  
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C   +I++ + +L ++   G+  N  +Y  +++  C  G+L  A++L + M+  G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM------------GFKPESDSWALLVE 492
             P   T N LL  LC  G  +D A+ +F  ++             G +P+  ++ +L+ 
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKD-ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 493 LICRGRKLLFAFELLDEL 510
            +    K L A EL +E+
Sbjct: 518 GLINEGKFLEAEELYEEM 535



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 223/430 (51%), Gaps = 24/430 (5%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNCSLHERV--LE 151
           T+ T+++ L R  +     A+L +M     +  +   G F++ M     C + + V  L 
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM-----CKMGDTVSALN 238

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +  K+  I+  KP++   S  ++ L +  +   + N L    Q   + PN   +N +I  
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHN-LFIEMQDKGIFPNIVTYNCMIGG 297

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C  G   +A  +L+EM + ++S PN++TY+ LI+   K G+F EA EL++EM+ +  I+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKIS-PNVVTYNALINAFVKEGKFFEAAELYDEMLPR-GII 355

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+ +TYN +IDGFC+  ++D A+ +   M   GC+P+VF +TTL++G+C   ++ +  E+
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             EM    L  +T+ Y TLI+ FC  G ++ AL+L ++M   G   DIVT N +L GLC 
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 475

Query: 392 EGKIEEALGMLEKLW-----------YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            GK+++AL M + +            ++G+  +  +Y I++     +G+  +A EL   M
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG +P   T + ++  LCK    ++A      +    F P   ++  L+   C+  ++
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595

Query: 501 LFAFELLDEL 510
               EL  E+
Sbjct: 596 DDGLELFCEM 605



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 48/359 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY +++D   +  + +A + +   M  + C      F  L+  +      + 
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
            +E+ H       E P    ++                              NT  +N L
Sbjct: 412 GMELLH-------EMPRRGLVA------------------------------NTVTYNTL 434

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK- 267
           I   C  G L +A ++ ++M  S +  P+++T +TL+DGLC NG+ ++A+E+F+ M    
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 268 ---------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                    + + PD LTYN+LI G    GK   A+++ E M + G  P+   Y+++++G
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ +L EA ++F  M +    P+ + + TLIN +C+AGRVD+ LEL  EM  RG  AD
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            + +  ++ G  + G I  AL + +++   G+Y +  + R +L     K ELE+A+ +L
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 672



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 162/317 (51%), Gaps = 7/317 (2%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P+   F  L+   C    +  A ++       Q+  P+++T++TL++GLC+ GR  
Sbjct: 145 LGLHPDVVTFTTLLHGLCLDHRVSEALDLFH-----QICRPDVLTFTTLMNGLCREGRVV 199

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + MV ++ + PD +TY   +DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 200 EAVALLDRMV-ENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G CK+G+  ++  +F EM++  + P+ + Y  +I  FC +GR   A  LL+EM ER 
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++VT+N ++    +EGK  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++  LM  +G  P   T   L+   C A   +D    L  +   G    + ++  L+   
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438

Query: 495 CRGRKLLFAFELLDELV 511
           C    L  A +L  +++
Sbjct: 439 CLVGDLNAALDLSQQMI 455



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 185/383 (48%), Gaps = 17/383 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + KG   N  TY  ++       ++ A   +L++M       +   +  L+  F      
Sbjct: 280 QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF 339

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
               E++ ++ P     P+    ++ ++   + +++D A++   Y        P+   F 
Sbjct: 340 FEAAELYDEMLP-RGIIPNTITYNSMIDGFCKQDRLDAAEDMF-YLMATKGCSPDVFTFT 397

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +C    ++   E+L EM +  +   N +TY+TLI G C  G    A++L ++M+S
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGL-VANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTL 315
              + PD +T N L+DG C  GK+  A ++ + M+            NG  P+V  Y  L
Sbjct: 457 S-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G   EGK  EA+E+++EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +  
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK-GELEKAI 434
             ++VTFN ++ G C+ G++++ L +  ++   GI  +   Y I L +  +K G +  A+
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY-ITLIYGFRKVGNINGAL 634

Query: 435 ELLRLMLCRGFLPHYATSNELLV 457
           ++ + M+  G  P   T   +L 
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLT 657



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 133/257 (51%), Gaps = 6/257 (2%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI+LF +M+ + + LP  + +N L+    R  + D    + + M+      +++++T L
Sbjct: 64  DAIDLFSDML-RSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +  FC   KL  A   F ++    L PD + +TTL++  C   RV EAL+L  ++    C
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D++TF  ++ GLCREG++ EA+ +L+++  +G+  ++ +Y   ++  C+ G+   A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 436 LLRLMLCRGFL-PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           LLR M     + P+    + ++  LCK G   D+      + + G  P   ++  ++   
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 495 CRGRKLLFAFELLDELV 511
           C   +   A  LL E++
Sbjct: 299 CISGRWSAAQRLLQEML 315


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 197/378 (52%), Gaps = 17/378 (4%)

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           L  RV E     H I R  P +   +T +N L    +V  A   L    ++  L+P+   
Sbjct: 163 LDHRVSEALDLFHQICR--PDVLTFTTLMNGLCREGRVVEAVALLDRMVEN-GLQPDQIT 219

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +   +   CK G   SA  +L++M++     PN++ YS +IDGLCK+GR  ++  LF EM
Sbjct: 220 YGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM 279

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  I P+ +TYN +I GFC  G+   A+++++ M     +PNV  Y  L+N F KEGK
Sbjct: 280 QDK-GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             EA E++DEM    + P+TI Y ++I+ FC+  R+D A ++   M  +GC  D+ TF  
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C   +I++ + +L ++   G+  N  +Y  +++  C  G+L  A++L + M+  G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM------------GFKPESDSWALLVE 492
             P   T N LL  LC  G  +D A+ +F  ++             G +P+  ++ +L+ 
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKD-ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 493 LICRGRKLLFAFELLDEL 510
            +    K L A EL +E+
Sbjct: 518 GLINEGKFLEAEELYEEM 535



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 223/430 (51%), Gaps = 24/430 (5%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNCSLHERV--LE 151
           T+ T+++ L R  +     A+L +M     +  +   G F++ M     C + + V  L 
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM-----CKMGDTVSALN 238

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +  K+  I+  KP++   S  ++ L +  +   + N L    Q   + PN   +N +I  
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHN-LFIEMQDKGIFPNIVTYNCMIGG 297

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C  G   +A  +L+EM + ++S PN++TY+ LI+   K G+F EA EL++EM+ +  I+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKIS-PNVVTYNALINAFVKEGKFFEAAELYDEMLPR-GII 355

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+ +TYN +IDGFC+  ++D A+ +   M   GC+P+VF +TTL++G+C   ++ +  E+
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             EM    L  +T+ Y TLI+ FC  G ++ AL+L ++M   G   DIVT N +L GLC 
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 475

Query: 392 EGKIEEALGMLEKLW-----------YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            GK+++AL M + +            ++G+  +  +Y I++     +G+  +A EL   M
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG +P   T + ++  LCK    ++A      +    F P   ++  L+   C+  ++
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595

Query: 501 LFAFELLDEL 510
               EL  E+
Sbjct: 596 DDGLELFCEM 605



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 48/359 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY +++D   +  + +A + +   M  + C      F  L+  +      + 
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
            +E+ H       E P    ++                              NT  +N L
Sbjct: 412 GMELLH-------EMPRRGLVA------------------------------NTVTYNTL 434

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK- 267
           I   C  G L +A ++ ++M  S +  P+++T +TL+DGLC NG+ ++A+E+F+ M    
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 268 ---------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                    + + PD LTYN+LI G    GK   A+++ E M + G  P+   Y+++++G
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ +L EA ++F  M +    P+ + + TLIN +C+AGRVD+ LEL  EM  RG  AD
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            + +  ++ G  + G I  AL + +++   G+Y +  + R +L     K ELE+A+ +L
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 672



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 162/317 (51%), Gaps = 7/317 (2%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P+   F  L+   C    +  A ++       Q+  P+++T++TL++GLC+ GR  
Sbjct: 145 LGLHPDVVTFTTLLHGLCLDHRVSEALDLFH-----QICRPDVLTFTTLMNGLCREGRVV 199

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + MV ++ + PD +TY   +DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 200 EAVALLDRMV-ENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G CK+G+  ++  +F EM++  + P+ + Y  +I  FC +GR   A  LL+EM ER 
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++VT+N ++    +EGK  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++  LM  +G  P   T   L+   C A   +D    L  +   G    + ++  L+   
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438

Query: 495 CRGRKLLFAFELLDELV 511
           C    L  A +L  +++
Sbjct: 439 CLVGDLNAALDLSQQMI 455



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 185/383 (48%), Gaps = 17/383 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + KG   N  TY  ++       ++ A   +L++M       +   +  L+  F      
Sbjct: 280 QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF 339

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
               E++ ++ P     P+    ++ ++   + +++D A++   Y        P+   F 
Sbjct: 340 FEAAELYDEMLP-RGIIPNTITYNSMIDGFCKQDRLDAAEDMF-YLMATKGCSPDVFTFT 397

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +C    ++   E+L EM +  +   N +TY+TLI G C  G    A++L ++M+S
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGL-VANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTL 315
              + PD +T N L+DG C  GK+  A ++ + M+            NG  P+V  Y  L
Sbjct: 457 S-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G   EGK  EA+E+++EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +  
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK-GELEKAI 434
             ++VTFN ++ G C+ G++++ L +  ++   GI  +   Y I L +  +K G +  A+
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY-ITLIYGFRKVGNINGAL 634

Query: 435 ELLRLMLCRGFLPHYATSNELLV 457
           ++ + M+  G  P   T   +L 
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLT 657



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 203/449 (45%), Gaps = 41/449 (9%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  +  +    +   AL +   + E      N   Y+ I+D L +  +      +  
Sbjct: 218 ITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFI 277

Query: 120 QMTYETCKFHEGIFLNLMKHFSNC-----------SLHERVL-EMFHKIHPITREKPSLK 167
           +M        +GIF N++ +  NC           S  +R+L EM  +     +  P++ 
Sbjct: 278 EMQ------DKGIFPNIVTY--NCMIGGFCISGRWSAAQRLLQEMLER-----KISPNVV 324

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLK 226
             +  +N  ++  +   A     Y     R + PNT  +N +I   CK+  L++A ++  
Sbjct: 325 TYNALINAFVKEGKFFEAAEL--YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 382

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
            M     S P++ T++TLIDG C   R  + +EL  EM  +  ++ + +TYN LI GFC 
Sbjct: 383 LMATKGCS-PDVFTFTTLIDGYCGAKRIDDGMELLHEM-PRRGLVANTVTYNTLIHGFCL 440

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL------ 340
            G ++ A  + + M ++G  P++    TL++G C  GKL++A E+F  M+   +      
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500

Query: 341 -----KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                +PD + Y  LI      G+  EA EL +EM  RG   D +T++ ++ GLC++ ++
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA  M   +       N  ++  ++N  C+ G ++  +EL   M  RG +        L
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +    K G    A      ++  G  P++
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDT 649



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 133/257 (51%), Gaps = 6/257 (2%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI+LF +M+ + + LP  + +N L+    R  + D    + + M+      +++++T L
Sbjct: 64  DAIDLFSDML-RSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +  FC   KL  A   F ++    L PD + +TTL++  C   RV EAL+L  ++    C
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D++TF  ++ GLCREG++ EA+ +L+++  +G+  ++ +Y   ++  C+ G+   A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 436 LLRLMLCRGFL-PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           LLR M     + P+    + ++  LCK G   D+      + + G  P   ++  ++   
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 495 CRGRKLLFAFELLDELV 511
           C   +   A  LL E++
Sbjct: 299 CISGRWSAAQRLLQEML 315


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 226/463 (48%), Gaps = 24/463 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           ++   K+ +  ++ F  +S++  + HN   + ++L++L R + F   D + R +  + C+
Sbjct: 123 IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-RILMIKACR 181

Query: 128 FHEGI-----FLNLMKH----FSNCSLHERVL-----EMFHKIHPITRE------KPSLK 167
             E I     FLN +      FS  S +  ++     EM      + ++      +PSL 
Sbjct: 182 NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLL 241

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
             +T +N+L +  +V  A+  L    Q+  L P+   +  LI  HC+   L+ AF V   
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQY-DLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 300

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M K     PN +TYSTLI+GLC  GR  EA+++ EEM+ K  I P   TY + I   C  
Sbjct: 301 MVKEGCD-PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG-IEPTVYTYTLPITALCAI 358

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
              + A +++  MK  GC PNV  YT L++G  + GKL+ A  ++ +M    L P+T+ Y
Sbjct: 359 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 418

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             LIN  C  GR   AL++   M+  G  A+  T+N I+ GLC  G IE+A+ + EK+  
Sbjct: 419 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 478

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G      +Y  ++N    KG +  A  LL LM   G  P   T NEL+    K G  E 
Sbjct: 479 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 538

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           A+     +VE G  P   S+  L++   +  K+  A  LL+ +
Sbjct: 539 ASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM 581



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 173/314 (55%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PNT  +N LI   C  G   +A ++   M+    S  N  TY+ +I GLC  G   +A
Sbjct: 411 LVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGSLANTQTYNEIIKGLCLGGDIEKA 469

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LFE+M+ K   LP  +TYN LI+G+   G V+ A ++++ MK NGC P+ + Y  L++
Sbjct: 470 MVLFEKML-KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 528

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF K GKL+ A   F EM    L P+ + YTTLI+   + G+VD AL LL+ M+E GC  
Sbjct: 529 GFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNP 588

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ ++N ++ GL +E +  EA  + +K+   G+  N  +Y  +++  C+ G  + A ++ 
Sbjct: 589 NVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 648

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  R  LP+  T + L+  LC+ G A++A I L  +   G  P+  ++  L++     
Sbjct: 649 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVL 708

Query: 498 RKLLFAFELLDELV 511
            ++  AF LL  +V
Sbjct: 709 GRIDHAFLLLRRMV 722



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 224/458 (48%), Gaps = 38/458 (8%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   N  TY  ++  L+R  K E    +  +M  E    +   +  L+         
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 147 ERVLEMFHKI--HPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
              L++FH +  H       +   I    CL   IE   V L +  LK         P  
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV-LFEKMLKMGPL-----PTV 485

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N LI  +  +G + +A  +L  MK++    P+  TY+ L+ G  K G+   A   F+
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCE-PDEWTYNELVSGFSKWGKLESASFYFQ 544

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EMV +  + P+ ++Y  LIDG  + GKVD A  ++E M+  GCNPNV +Y  ++NG  KE
Sbjct: 545 EMV-ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKE 603

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            +  EA+++ D+M    L P+ I YTTLI+  CR GR   A ++  +M++R C  ++ T+
Sbjct: 604 NRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 663

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           + ++ GLC+EGK +EA  +L+++   G+  ++ ++  +++     G ++ A  LLR M+ 
Sbjct: 664 SSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVD 723

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIAL----------------FGLV--------EM 478
            G  P+Y T + LL  L K  +  +  +A+                F +V        E+
Sbjct: 724 VGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEI 783

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           G +P  D+++ LV  +CR  +   A +L+ ++  KE G
Sbjct: 784 GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM--KERG 819



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 179/342 (52%), Gaps = 28/342 (8%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +  LI  H K G ++ A  +L+ M++   + PN+ +Y+ +I+GL K  RF EA
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN-PNVESYNAVINGLSKENRFSEA 609

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ ++M ++  +LP+ +TY  LIDG CR G+   A KI   M+   C PN++ Y++L+ 
Sbjct: 610 EKICDKM-AEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 668

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+EGK  EA+ +  EM+   L PD + +T+LI+ F   GR+D A  LL+ M + GCK 
Sbjct: 669 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKP 728

Query: 378 DIVTFNIILGGLCREGKI-EEALGMLEKLWYD-----------------------GIYLN 413
           +  T++++L GL +E  + EE + +  +  Y                        G    
Sbjct: 729 NYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPT 788

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +++  C+KG   +A +L++ M  RGF P       LL+  CK  +  D A+ +F
Sbjct: 789 LDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK-NLEVDHALKIF 847

Query: 474 GLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             +E  GF+     +  L+  +C+  ++  A  L D ++ KE
Sbjct: 848 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 889



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 200/424 (47%), Gaps = 21/424 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   +  TY  ++   +++ K E+     ++M       +   +  L+   S     
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIF 205
           +  L +  ++  +    P++++ +  +N L + N+   A+    K + Q L   PN   +
Sbjct: 572 DIALSLLERMEEMGC-NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLL--PNVITY 628

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   C+ G  + AF++  +M+K +   PNL TYS+LI GLC+ G+  EA  L +EM 
Sbjct: 629 TTLIDGLCRNGRTQFAFKIFHDMEKRK-CLPNLYTYSSLIYGLCQEGKADEAEILLKEME 687

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K  + PD +T+  LIDGF   G++D A  ++  M + GC PN   Y+ L+ G  KE  L
Sbjct: 688 RKG-LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLL 746

Query: 326 QEAKEVFDEMKNFLLKPD--TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            E K        +   P    + +  + N             LL  M E GC+  + T++
Sbjct: 747 LEEKVAVQHEAVYSFSPHEKDVNFEIVSN-------------LLARMSEIGCEPTLDTYS 793

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLCR+G+  EA  +++ +   G   ++  Y  +L   C+  E++ A+++   +  +
Sbjct: 794 TLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 853

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           GF  H +    L+  LCKAG  E+A      ++E  +  +   W +LV+ + +  +L   
Sbjct: 854 GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLC 913

Query: 504 FELL 507
            +LL
Sbjct: 914 MKLL 917



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 1/170 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P L TYSTL+ GLC+ GRF EA +L ++M  +    PD   Y  L+   C+  +VD A K
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG-FCPDREIYYSLLIAHCKNLEVDHALK 845

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           I   ++  G   ++  Y  L+   CK G+++EA+ +FD M       D I +T L++   
Sbjct: 846 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 905

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
           + G +D  ++LL  M+ +    +I T+ I+   L R GK  E+  + +KL
Sbjct: 906 KEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 120/246 (48%), Gaps = 1/246 (0%)

Query: 267 KDQILPDALTYNVLIDGFCRGGK-VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +D++   A    +L+   CR  + + R    +  +   G   ++++  TL+    K   +
Sbjct: 162 RDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMV 221

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A+ ++ +M N  ++P  + + TLIN   + G+V EA  +L ++ +     D+ T+  +
Sbjct: 222 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 281

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G CR   ++ A G+ +++  +G   N  +Y  ++N  C +G +++A+++L  M+ +G 
Sbjct: 282 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 341

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   T    +  LC     E+A   +  + + G +P   ++  L+  + R  KL  A  
Sbjct: 342 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 401

Query: 506 LLDELV 511
           L  +++
Sbjct: 402 LYHKML 407



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 125/289 (43%), Gaps = 26/289 (8%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C++      EI     E+KG   +  T+ +++D      + +    +LR+M    CK + 
Sbjct: 671 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNY 730

Query: 131 GIFLNLMKHFSN-CSLHERVLEMFHK----IHPITRE------------------KPSLK 167
             +  L+K     C L E  + + H+      P  ++                  +P+L 
Sbjct: 731 RTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLD 790

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
             ST ++ L    +   A+  +K   +     P+  I+  L+  HCK   ++ A ++   
Sbjct: 791 TYSTLVSGLCRKGRFYEAEQLVKDMKER-GFCPDREIYYSLLIAHCKNLEVDHALKIFHS 849

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           ++       +L  Y  LI  LCK G+  EA  LF+ M+ K+    D + + VL+DG  + 
Sbjct: 850 IEAKGFQL-HLSIYRALICALCKAGQVEEAQALFDNMLEKEWN-ADEIVWTVLVDGLLKE 907

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           G++D   K++  M++    PN+  Y  L     + GK  E++ + D++K
Sbjct: 908 GELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 239/495 (48%), Gaps = 48/495 (9%)

Query: 61  SHGAAI-SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           ++G+ I  L K  K  Q A E+ + + + +G     A +  ++  L +  +F       +
Sbjct: 32  TYGSLIHGLCKAGKLDQ-AYELLDEMRD-RGIPPGVAVHNGVIRGLCKAGRFGDALGYFK 89

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
            +    C      F  L+         E   ++F  +H  ++  P++   +T +N L + 
Sbjct: 90  TVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKD 149

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            ++D A   L   N+     PN   +++L++  CK G  +  F +L+EM +     P++I
Sbjct: 150 GKLDRAIELLDLMNET-GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ-PDVI 207

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            Y+TL++GLCK+ R  EA+EL + M+ +    P  +TYN L++ FCR  +VDRA ++++ 
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMI-RSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC P+V NY T++ G C++ +L +A+ +  +M      PD I Y+T+I+  C+  R
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326

Query: 360 VDE------ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           VD       A E+L+ MK+ GC  +  T+ +++ GLCR  K ++AL +L ++    +  +
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386

Query: 414 KASYRIVLNFSCQK-----------------------------------GELEKAIELLR 438
            +S+ +V+   C+                                    GE++KA+ +  
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           LM+   F P  AT N +L  LC  G  E+A   + G++     P+  S+  L+  +CR  
Sbjct: 447 LMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 499 KLLFAFELLDELVIK 513
            +  A+EL   +  K
Sbjct: 506 CVEEAYELFQAVEAK 520



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 181/321 (56%), Gaps = 7/321 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FNIL+    K G +E AF++ + M  S    PN++TY+T+I+GLCK+G+   AIE
Sbjct: 98  PDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE 157

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L + M ++    P+ +TY+VL++G C+ G+ D+   +++ M   G  P+V  Y TL+NG 
Sbjct: 158 LLDLM-NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  +L EA E+   M      P  + Y +L+  FCR+ +VD A  L++ M ERGC  D+
Sbjct: 217 CKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDV 276

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG------ELEKA 433
           + +N ++ GLCR+ ++++A  +L+++       +  +Y  +++  C+        +LE A
Sbjct: 277 INYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAA 336

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            E+L +M   G  P+  T   ++  LC+A  ++ A   L  +++    P+  S+++++  
Sbjct: 337 CEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGS 396

Query: 494 ICRGRKLLFAFELLDELVIKE 514
           +C+   L  A+++   +  +E
Sbjct: 397 LCKSHDLDAAYKIFGMMSERE 417



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 202/387 (52%), Gaps = 20/387 (5%)

Query: 142 NCSL--------HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           NC+L        H + +++F +     R  P+     + ++ L ++ ++D A   L    
Sbjct: 2   NCALNLLVRAGQHGQAVQLFRE----ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
               + P   + N +I+  CK G    A    K +  ++ + P++IT++ L+D L K+GR
Sbjct: 58  DR-GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCT-PDIITFNILVDALVKSGR 115

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA ++FE M +  Q LP+ +TY  +I+G C+ GK+DRA ++++ M   GC PNV  Y+
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G CK G+  +   +  EM     +PD I Y TL+N  C++ R+DEALEL++ M   
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC   +VT+N ++   CR  +++ A  +++ +   G   +  +Y  V+   C+   L+ A
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCK-----AGMAEDAAIALFGLV-EMGFKPESDSW 487
             LL+ M+    +P   T + ++  LCK     A    +AA  +  ++ + G  P + ++
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355

Query: 488 ALLVELICRGRKLLFAFELLDELVIKE 514
           A+++E +CR RK   A  LL  ++  E
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSE 382



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 226/451 (50%), Gaps = 19/451 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +IF ++        N  TY T+++ L +  K +    +L  M    C  +   +  L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           +         R  + F  +  +TR   +P +   +T LN L +S ++D A   ++   + 
Sbjct: 179 EGLCKAG---RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P    +N L++  C+   ++ AF +++ M +     P++I Y+T+I GLC++ R  
Sbjct: 236 -GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP-PDVINYNTVIAGLCRDARLD 293

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR------AKKIMEFMKNNGCNPNV 309
           +A  L ++MV+  + +PD +TY+ +IDG C+  +VD       A +I+E MK  GC PN 
Sbjct: 294 DAQALLKQMVAA-RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  ++ G C+  K Q+A  +   M +  + PD   ++ +I   C++  +D A ++   
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGM 412

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M ER CK + V +  ++ GL + G++++A+ + E L  +      A+Y  VL+  C  G 
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGR 471

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWA 488
           +E+A+ ++  M+ +   P  A+   L+  LC+    E+ A  LF  VE  GF  E   + 
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEE-AYELFQAVEAKGFAMEVGVYN 530

Query: 489 LLVELICRGRKLLFAFELLDELVIKESGTIQ 519
           +LV  +C+ ++L  A  + ++L+  E+G  Q
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLI--EAGYKQ 559


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 242/482 (50%), Gaps = 26/482 (5%)

Query: 52  DARKRSRFISHGAAI----SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
           D R  S F S  A I     L++  ++ + AL  F     + GF H +  Y  ++  L  
Sbjct: 85  DFRIVSLFDSALAPIWASRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFC 144

Query: 108 YKKFEAVDAVLRQM------------------TYETCKFHEGIFLNLMKHFSNCSLHERV 149
            + +   +AVL+++                  T   C    G+F  L        + E  
Sbjct: 145 ARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEA 204

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E F K+    R  P  ++ +  L+ L +  + DL++ F K       +K +   +NI+I
Sbjct: 205 SECFLKMRKF-RVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAA-GIKRSVFTYNIMI 262

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
            + CK G LE A  +  +MK++  + P+++TY++LIDG  K G   E I +FE+M   D 
Sbjct: 263 DYLCKEGDLEMARSLFTQMKEAGFT-PDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD- 320

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             PD +TYN LI+ FC+  ++ +A + +  MK NG  PNV  Y+T ++ FCKEG LQEA 
Sbjct: 321 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           + F +M+   L P+   YT+LI+  C+AG + EAL+L++E+ + G K ++VT+  +L GL
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C EG+++EA  +   +   G+  N+ +Y  +++   +  E+E A ++L+ M  +   P  
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
                +L  LC     E+A + +  + E G    +  +  L++   +  +   A  LL+E
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 510 LV 511
           ++
Sbjct: 561 ML 562



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/314 (35%), Positives = 177/314 (56%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N LI   CK   +  AFE L EMK + +  PN++TYST ID  CK G  +EAI+
Sbjct: 323 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLK-PNVVTYSTFIDAFCKEGMLQEAIK 381

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F +M  +  + P+  TY  LID  C+ G +  A K++E +   G   NV  YT L++G 
Sbjct: 382 FFVDM-RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+EG+++EA+EVF  M N  + P+   YT L++ F +A  ++ A ++LKEMKE+  K D+
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           + +  IL GLC E ++EEA  ++ ++   GI  N   Y  +++   + G+  +A+ LL  
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML  G +    T   L+  LCK+G+ ++A      + E+G +P    +  LV+ +C+   
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620

Query: 500 LLFAFELLDELVIK 513
              A +L DE++ K
Sbjct: 621 FEVAKKLFDEMLDK 634



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 230/459 (50%), Gaps = 6/459 (1%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV 114
           KRS F ++   I  +  E + + A  +F  + E  GF  +  TY +++D   +    +  
Sbjct: 252 KRSVF-TYNIMIDYLCKEGDLEMARSLFTQMKEA-GFTPDIVTYNSLIDGHGKLGLLDEC 309

Query: 115 DAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
             +  QM    C      +  L+  F       +  E  H++      KP++   ST ++
Sbjct: 310 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKA-NGLKPNVVTYSTFID 368

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
              +   +  A  F     + + L PN   +  LI  +CK G L  A ++++E+ ++ + 
Sbjct: 369 AFCKEGMLQEAIKFF-VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 427

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
             N++TY+ L+DGLC+ GR +EA E+F  M++   + P+  TY  L+ GF +  +++ AK
Sbjct: 428 L-NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG-VAPNQETYTALVHGFIKAKEMEYAK 485

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            I++ MK     P++  Y T++ G C E +L+EAK +  E+K   +  + + YTTL++ +
Sbjct: 486 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 545

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
            ++G+  EAL LL+EM + G  A  VT+  ++ GLC+ G ++EA+    ++   G+  N 
Sbjct: 546 FKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNV 605

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           A Y  +++  C+    E A +L   ML +G +P       L+    K G  ++A      
Sbjct: 606 AVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 665

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++E+G + +  ++  L+  +    ++  A  LLDE++ K
Sbjct: 666 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 704



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 185/398 (46%), Gaps = 41/398 (10%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSE--QKGFNHNNATYATILDKLARY 108
           VD R+ +   +     SLI    +     E    V E  Q G   N  TY  +LD L   
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 443

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
            + +  + V R M       + G+                               P+ + 
Sbjct: 444 GRMKEAEEVFRAM------LNAGV------------------------------APNQET 467

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +  ++  I++ +++ A++ LK   +   +KP+  ++  ++   C    LE A  ++ E+
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLLLYGTILWGLCNESRLEEAKLLIGEI 526

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K+S ++  N + Y+TL+D   K+G+  EA+ L EEM+    I  + +TY  LIDG C+ G
Sbjct: 527 KESGIN-TNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE-VTYCALIDGLCKSG 584

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            V  A      M   G  PNV  YT L++G CK    + AK++FDEM +  + PD I YT
Sbjct: 585 LVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYT 644

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LI+   + G + EAL L   M E G + D+  +  ++ GL   G++++A  +L+++   
Sbjct: 645 ALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 704

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           G+  ++  Y  ++      G++++A+EL   M  RG +
Sbjct: 705 GVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 195/349 (55%), Gaps = 5/349 (1%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
            T +N L +  Q   A   L+  +  L ++PN  ++N +I   CK   +  AF++  EM 
Sbjct: 181 GTLINGLCKVGQTSAALQLLRRVDGKL-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
              +S P+++TY+ LI G C  G+ ++A +LF +M+ ++ I P+  T+N+L+DGFC+  +
Sbjct: 240 SKGIS-PDVVTYNALISGFCIVGKMKDATDLFNKMIFEN-INPNVYTFNILVDGFCKERR 297

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +  AK ++  M   G  P+VF Y +LM+ +C   ++ +AK +F+ +    + P+   Y+ 
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +I+ FC+  +VDEA+ L KEM       D+VT+N ++ GLC+ GKI  AL +++++   G
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  +K +Y  +L+  C+  +++KAI LL  M   G  P   T   L+  LCK G  EDA 
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           I    L+  G+  + + +  +++  C       + +LL ++  +E+G I
Sbjct: 478 IVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKM--EENGCI 524



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 188/364 (51%), Gaps = 8/364 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF+ N  +Y T+++ L +  +  A   +LR++  +  + +  ++  ++       L    
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 231

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            +++ ++    I+ +  +  A+ +   ++ +        N + + N    + PN   FNI
Sbjct: 232 FDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN----INPNVYTFNI 287

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   CK   L+ A  VL  M K  +  P++ TY++L+D  C      +A  +F   +S+
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIK-PDVFTYNSLMDRYCLVKEVNKAKHIFNT-ISQ 345

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + P+  +Y+++I GFC+  KVD A  + + M  N   P+V  Y +L++G CK GK+  
Sbjct: 346 RGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISY 405

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++ DEM +  +  D I Y ++++  C+  +VD+A+ LL +MK+ G + DI T+  ++ 
Sbjct: 406 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVD 465

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G++E+A  + E L   G  L+   Y  ++   C  G  +++++LL  M   G +P
Sbjct: 466 GLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIP 525

Query: 448 HYAT 451
           +  T
Sbjct: 526 NAVT 529



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 194/387 (50%), Gaps = 5/387 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S+G  I+ +    +   AL++   V + K    N   Y TI+D + + K       +  
Sbjct: 178 VSYGTLINGLCKVGQTSAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 236

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           +M  +        +  L+  F      +   ++F+K+       P++   +  ++   + 
Sbjct: 237 EMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKM-IFENINPNVYTFNILVDGFCKE 295

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            ++  A+N L    +   +KP+   +N L+  +C    +  A  +   + +  ++ PN+ 
Sbjct: 296 RRLKEAKNVLAMMMKQ-GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN-PNIH 353

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           +YS +I G CK  +  EA+ LF+EM   + I+PD +TYN LIDG C+ GK+  A K+++ 
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEM-HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE 412

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M + G   +   Y ++++  CK  ++ +A  +  +MK+  ++PD   YTTL++  C+ GR
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A  + +++  +G   D+  +  ++ G C  G  +E+L +L K+  +G   N  +Y I
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFL 446
           ++     K E +KA +LLR M+ RG  
Sbjct: 533 IICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 169/333 (50%), Gaps = 3/333 (0%)

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           + N+ +L  +F +  +Q    KP+   F  ++    K     +   + ++M+ + ++  +
Sbjct: 49  DDNKHNLVSSFNRLLHQK-NPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGIT-SD 106

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           L+  S LI+   + G+   +  +  +++ K    P+ +T   LI G C  G++ +A +  
Sbjct: 107 LVILSILINCFSQLGQNPLSFSVLAKIL-KMGYEPNVITLTTLIKGLCLKGQIHQALQFH 165

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + +   G + N  +Y TL+NG CK G+   A ++   +   L++P+ + Y T+I+  C+ 
Sbjct: 166 DKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 225

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
             V+EA +L  EM  +G   D+VT+N ++ G C  GK+++A  +  K+ ++ I  N  ++
Sbjct: 226 KLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTF 285

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I+++  C++  L++A  +L +M+ +G  P   T N L+ R C       A      + +
Sbjct: 286 NILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQ 345

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P   S+++++   C+ +K+  A  L  E+
Sbjct: 346 RGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 103/205 (50%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++F +  ++    K         +  +M+   +  D +  + LINCF + G+   +  +
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ + G + +++T   ++ GLC +G+I +AL   +K+   G +LNK SY  ++N  C+
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+   A++LLR +  +   P+    N ++  +CK  +  +A      +V  G  P+  +
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           +  L+   C   K+  A +L ++++
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMI 274


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 242/500 (48%), Gaps = 21/500 (4%)

Query: 17  FSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQ 76
            ST+SS     S L+ +    P  + P   S       + + F++    I +IK +K P 
Sbjct: 76  LSTASSI---TSFLQTLNPQNPTPNSPTSISPL----SQFAPFLNPXLVIQVIKSQKNPY 128

Query: 77  CALEIFNTVSEQKG----FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
            AL  FN  S        ++H++  Y  I D L  +  F    ++L Q  +    F    
Sbjct: 129 HALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLL-QSHHRLSDFAAAK 187

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F+   K + +       +  FH+   +   +  L + +  L + +++N++ LA+      
Sbjct: 188 FV---KAYGDRGDIRGAIHWFHRAKKMESGR-CLFSYNAILGVFVKANRIMLARAVFDQI 243

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            +   +KP+   +  +I+ +CK G +E+A  V  EM       PNL+TY+T+I+G CK G
Sbjct: 244 VKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMG----CKPNLVTYNTMINGFCKKG 299

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
               A+++ ++M   +  +PD +TY  LIDG+C+ G+++ A K ME M +  C PNV  Y
Sbjct: 300 LMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTY 359

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             ++ G C  G + EAK +   M+   LK +   +T+++   C  G++D+A   LKEM  
Sbjct: 360 NAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVG 419

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G +AD   + +++   C+ GK ++A+ +L+++   GI  + +S+  V     + G+ +K
Sbjct: 420 LGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDK 479

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKA-GMAEDAAIALFGLVEMGFKPESDSWALLV 491
           A  +LR M   G  P++ + + ++  LCKA G   +    +  +   G   ++  ++ LV
Sbjct: 480 AGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLV 539

Query: 492 ELICRGRKLLFAFELLDELV 511
           +  C       A  L  E++
Sbjct: 540 KGYCEDGNADMAMRLFCEML 559



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 38/295 (12%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH------ 129
           + A++I + ++E +    +  TY T++D   +  + E     + +M    C+ +      
Sbjct: 302 ESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNA 361

Query: 130 --EGIFLN--------LMKHF------SNCSLHERVLE---MFHKIHPITRE-------- 162
              G+ LN        +M          N + H  +L+   +  K+    R         
Sbjct: 362 IIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLG 421

Query: 163 -KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
            +   KA    +N   +  + D A + LK   +   + P+   FN + +   + G  + A
Sbjct: 422 MEADAKAYGVVVNEYCKIGKADDAISLLK-EMKSRGINPSVSSFNAVFRILVESGKTDKA 480

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCK-NGRFREAIELFEEMVSKDQILPDALTYNVL 280
             +L++MK+   + PN ++YST+IDGLCK  GR  E  E  ++M      L DA  Y+ L
Sbjct: 481 GLILRQMKQLGCT-PNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHL-DASMYSWL 538

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           + G+C  G  D A ++   M + G   N+ ++   + G   + K  E ++ F+EM
Sbjct: 539 VKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEM 593


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 198/352 (56%), Gaps = 5/352 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +P +   ST ++ L +   VD A +   YS  + R + P+   +  LI   C  G L  A
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDL--YSEMNARGIFPDVITYTTLICGFCLAGQLMEA 204

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           F +L EM    ++ PN+ TY+TLID LCK G+ +E+  L   M +K  + PD + Y++L+
Sbjct: 205 FGLLNEMILKNIN-PNIYTYNTLIDTLCKEGKVKESKNLLAVM-TKKGVKPDVVIYSILM 262

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG+C  G+V +AK+I   M   G NP+V++Y  ++NG CK  ++ EA  +  EM +  + 
Sbjct: 263 DGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMI 322

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PDT+ Y++LI+  C+ GR+   L+L KEM  RG  A++VT+N +L GLC+   +++A+ +
Sbjct: 323 PDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIAL 382

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K+   GI  NK +Y  +++  C+ G L+K   L + +L +G+     T   ++  LCK
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            GM ++A      + + G  P + ++ +++  +    +   A +LL E++ K
Sbjct: 443 EGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAK 494



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 214/393 (54%), Gaps = 15/393 (3%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S+G  ++ +    E +CA+++  T+ E +    +   Y+TI+D L + K  +    +  
Sbjct: 116 VSYGILLNGLCKIGETRCAIKLLRTI-EDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYS 174

Query: 120 QMTYETCKFHEGIFLNLMKHFS---NCSLHERVLEMFHKIHPITREK--PSLKAISTCLN 174
           +M         GIF +++ + +      L  +++E F  ++ +  +   P++   +T ++
Sbjct: 175 EMN------ARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
            L +  +V  ++N L    +   +KP+  I++IL+  +C  G ++ A ++   M ++ ++
Sbjct: 229 TLCKEGKVKESKNLLAVMTKK-GVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVN 287

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            P++ +Y+ +I+GLCK  R  EA+ L  EM+ K+ I PD +TY+ LIDG C+ G++    
Sbjct: 288 -PDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMI-PDTVTYSSLIDGLCKLGRITTIL 345

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            + + M + G   N+  Y +L++G CK   L +A  +F +MK   ++P+   YT LI+  
Sbjct: 346 DLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ GR+ +   L + +  +G   D+ T+ +++ GLC+EG  +EAL M  K+  +G   N 
Sbjct: 406 CKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNA 465

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            ++ I++    +K E +KA +LL  M+ +G LP
Sbjct: 466 VTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 176/312 (56%), Gaps = 4/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAI 258
           P+    +ILI   C  G +  +F VL ++ K  + Y PN I  +TL+ GLC  G  ++++
Sbjct: 43  PDLVTLSILINCFCHLGQMAFSFSVLGKILK--LGYQPNTIILNTLMKGLCLKGEVKKSL 100

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
              +++V++   + D ++Y +L++G C+ G+   A K++  +++    P+V  Y+T+++G
Sbjct: 101 HFHDKVVAQGFQM-DQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+  + EA +++ EM    + PD I YTTLI  FC AG++ EA  LL EM  +    +
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           I T+N ++  LC+EGK++E+  +L  +   G+  +   Y I+++  C  GE++KA ++  
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           +M+  G  P   + N ++  LCK    ++A   L  ++     P++ +++ L++ +C+  
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339

Query: 499 KLLFAFELLDEL 510
           ++    +L  E+
Sbjct: 340 RITTILDLTKEM 351



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 148/278 (53%), Gaps = 1/278 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+L+T S LI+  C  G+   +  +  +++ K    P+ +  N L+ G C  G+V ++  
Sbjct: 43  PDLVTLSILINCFCHLGQMAFSFSVLGKIL-KLGYQPNTIILNTLMKGLCLKGEVKKSLH 101

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
             + +   G   +  +Y  L+NG CK G+ + A ++   +++   +PD + Y+T+I+  C
Sbjct: 102 FHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLC 161

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +   VDEA +L  EM  RG   D++T+  ++ G C  G++ EA G+L ++    I  N  
Sbjct: 162 KDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIY 221

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++G+++++  LL +M  +G  P     + L+   C  G  + A      +
Sbjct: 222 TYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVM 281

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           V+ G  P+  S+ +++  +C+G+++  A  LL E++ K
Sbjct: 282 VQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK 319



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 106/207 (51%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  ++    K         +  +M+   + PD +  + LINCFC  G++  +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ + G + + +  N ++ GLC +G+++++L   +K+   G  +++ SY I+LN  C+
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            GE   AI+LLR +  R   P     + ++  LCK  + ++A      +   G  P+  +
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  L+   C   +L+ AF LL+E+++K
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILK 214


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 171/315 (54%), Gaps = 2/315 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +   P+T  FN LI+  C RG +  A  V  +M     S P+++TYS L+D  CK   +R
Sbjct: 156 MPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCS-PSVVTYSILLDATCKASGYR 214

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ L +EM +K    PD +TYNVLI+  C  G VD A  I+  + ++GC P+   YT +
Sbjct: 215 QAMVLLDEMRAK-GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPV 273

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +   C   + +E +E+F EM +    PD + + T++   C+ G VD A++++  M E GC
Sbjct: 274 LKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGC 333

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             DIVT++ IL GLC  G++++A+ +L +L   G   +  +Y  VL   C   + E A E
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+  M+C    P   T N ++  LC+ G+ + A   +  + E G  P+  ++  +++ +C
Sbjct: 394 LMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLC 453

Query: 496 RGRKLLFAFELLDEL 510
             R +  A ELL  L
Sbjct: 454 NERCIDDAMELLSNL 468



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 180/320 (56%), Gaps = 4/320 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N+LI   C  G ++ A  +L ++  S    P+ +TY+ ++  LC + R++E  
Sbjct: 229 EPDIVTYNVLINAMCNEGDVDEALNILSDLP-SHGCKPDAVTYTPVLKSLCGSERWKEVE 287

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ELF EM S ++  PD +T+N ++   C+ G VDRA K+++ M  +GC P++  Y+++++G
Sbjct: 288 ELFAEMAS-NKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDG 346

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C  G++ +A E+   +K++  KPDTI YTT++   C   + + A EL+ EM    C  D
Sbjct: 347 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPD 406

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            VTFN ++  LC++G ++ A+ ++E++  +G   +  +Y  +++  C +  ++ A+ELL 
Sbjct: 407 EVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLS 466

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P   T N LL  LC     EDA   +  ++     P++ ++  ++  +C+  
Sbjct: 467 NLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG 526

Query: 499 KLLFAFELLDELVIKESGTI 518
            LL A E L   ++ E+G I
Sbjct: 527 LLLQAIETLK--IMAENGCI 544



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 219/435 (50%), Gaps = 9/435 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +   +G + +  TY+ +LD   +   +     +L +M  + C+     +  L+
Sbjct: 181 ALAVFDDML-HRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLI 239

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV-DLAQNFLKYSNQHL 196
               N    +  L +   + P    KP     +  L  L  S +  ++ + F + ++   
Sbjct: 240 NAMCNEGDVDEALNILSDL-PSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASN-- 296

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +  P+   FN ++   C++G ++ A +V+  M +     P+++TYS+++DGLC  GR  +
Sbjct: 297 KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSE-HGCIPDIVTYSSILDGLCDVGRVDD 355

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+EL   + S     PD + Y  ++ G C   + + A+++M  M  + C P+   + T++
Sbjct: 356 AVELLSRLKSY-GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVI 414

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
              C++G +  A +V ++M      PD + Y ++I+  C    +D+A+ELL  ++  GCK
Sbjct: 415 ASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCK 474

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            DIVTFN +L GLC   + E+A  ++  + +     +  ++  V+   CQKG L +AIE 
Sbjct: 475 PDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIET 534

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L++M   G +P+ +T N ++  L KAG  ++A   L G+      P+  ++  ++  I +
Sbjct: 535 LKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN--GTPDLITYNTVISNITK 592

Query: 497 GRKLLFAFELLDELV 511
             K+  A +LL  +V
Sbjct: 593 AGKMEEALDLLRVMV 607



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 159/309 (51%), Gaps = 8/309 (2%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           NILIK  C  G +  A  V   +  S      ++TY+T+++G C+ GR  +A  L   M 
Sbjct: 102 NILIKRLCSGGRVADAERVFATLGASA----TVVTYNTMVNGYCRAGRIEDARRLISGM- 156

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
                 PD  T+N LI   C  G+V  A  + + M + GC+P+V  Y+ L++  CK    
Sbjct: 157 ---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGY 213

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           ++A  + DEM+    +PD + Y  LIN  C  G VDEAL +L ++   GCK D VT+  +
Sbjct: 214 RQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPV 273

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L  LC   + +E   +  ++  +    ++ ++  ++   CQ+G +++AI+++  M   G 
Sbjct: 274 LKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGC 333

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           +P   T + +L  LC  G  +DA   L  L   G KP++ ++  +++ +C   +   A E
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393

Query: 506 LLDELVIKE 514
           L+ E+V  +
Sbjct: 394 LMAEMVCSD 402



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 225/482 (46%), Gaps = 54/482 (11%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E  N +S+    G   +  TY  +L  L   ++++ V+ +  +M    C   E  F  ++
Sbjct: 250 EALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIV 309

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                  L +R +++   +  H      P +   S+ L+ L +  +VD A   L     +
Sbjct: 310 TSLCQQGLVDRAIKVVDHMSEHGCI---PDIVTYSSILDGLCDVGRVDDAVELLSRLKSY 366

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              KP+T  +  ++K  C     E A E++ EM  S    P+ +T++T+I  LC+ G   
Sbjct: 367 -GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCP-PDEVTFNTVIASLCQKGLVD 424

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            AI++ E+M S++   PD +TYN +IDG C    +D A +++  +++ GC P++  + TL
Sbjct: 425 RAIKVVEQM-SENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTL 483

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   + ++A+++   M +    PD   + T+I   C+ G + +A+E LK M E GC
Sbjct: 484 LKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGC 543

Query: 376 ---------------------------------KADIVTFNIILGGLCREGKIEEALGML 402
                                              D++T+N ++  + + GK+EEAL +L
Sbjct: 544 IPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLL 603

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +  +G+  +  +YR +    C++   ++AI +L  +   G  P     N++L+  C+ 
Sbjct: 604 RVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQ- 662

Query: 463 GMAEDAAIALFG-LVEMGFKPESDSWALLVE------LICRGRKLLF---AFELLDELVI 512
               D AI  F  +V  G  P+  ++ +L+E      L+   ++LL    +  +LD+ +I
Sbjct: 663 NWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSLI 722

Query: 513 KE 514
           +E
Sbjct: 723 EE 724



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 196/403 (48%), Gaps = 7/403 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++ + +SE  G   +  TY++ILD L    + +    +L ++    CK     +  ++
Sbjct: 321 AIKVVDHMSEH-GCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVL 379

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K   +    E   E+  ++   +   P     +T +  L +   VD A   ++  +++  
Sbjct: 380 KGLCSIEQWEHAEELMAEMV-CSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN-G 437

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +N +I   C    ++ A E+L  ++ S    P+++T++TL+ GLC   R+ +A
Sbjct: 438 CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ-SYGCKPDIVTFNTLLKGLCSVDRWEDA 496

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L   M+  D   PDA T+N +I   C+ G + +A + ++ M  NGC PN   Y  +++
Sbjct: 497 EQLMVNMMHSD-CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVD 555

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              K GK QEA ++   M N    PD I Y T+I+   +AG+++EAL+LL+ M   G   
Sbjct: 556 ALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSP 613

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D +T+  +  G+CRE   + A+ ML +L   G+  +   Y  +L   CQ    + AI+  
Sbjct: 614 DTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCF 673

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             M+  G +P  +T   LL  L    + ++A   L  L  +G 
Sbjct: 674 AHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/298 (36%), Positives = 169/298 (56%), Gaps = 2/298 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN   +N +I   CK G +  A  VL+EM    ++ P+ + Y+TLIDG CK G    A
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA-PDGVIYTTLIDGFCKLGNVSSA 277

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM  K +I PD +TY  +I G C+ G+V  A K+   M      P+   YT L++
Sbjct: 278 YRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CKEGK++EA  + ++M    L P+ + YT L +  C+ G VD A ELL EM  +G + 
Sbjct: 337 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 396

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I T+N ++ GLC+ G I++A+ +++ +   G + +  +Y  +++  C+  E+ +A ELL
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           R ML R   P   T N L+   C +GM ED    L  ++E G  P + ++  L++  C
Sbjct: 457 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 514



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 201/399 (50%), Gaps = 39/399 (9%)

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E VL++  ++  I   KP+    +  + LL ++ +V  A+  L+       + P+  I+ 
Sbjct: 205 EWVLKLIEEMQ-IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE-GIAPDGVIYT 262

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   CK G + SA+ +  EM+K ++S P+ ITY+ +I GLC+ GR  EA +LF EMV 
Sbjct: 263 TLIDGFCKLGNVSSAYRLFDEMQKRKIS-PDFITYTAVICGLCQTGRVMEADKLFHEMVC 321

Query: 267 KDQILPDALTYNVLIDGFCRGGK-----------------------------------VD 291
           K ++ PD +TY  LIDG+C+ GK                                   VD
Sbjct: 322 K-RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 380

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A +++  M   G   N++ Y +L+NG CK G + +A ++  +M+     PD + YTTL+
Sbjct: 381 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 440

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           + +C++  +  A ELL++M +R  +  +VTFN+++ G C  G +E+   +L+ +   GI 
Sbjct: 441 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 500

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y  ++   C +  +    E+ R M  +G +P   T N L+   CKA   ++A   
Sbjct: 501 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 560

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +V  GF     S+  L++   + +K L A EL +++
Sbjct: 561 HRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 599



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 239/521 (45%), Gaps = 22/521 (4%)

Query: 7   SLRKCCRFSSFSTSSSSLP---------WISP-LEVIKANTPKADPPVETSDTCVDARKR 56
           SL   C  +  +T+S  L          W++P L+V  +   K    +      +     
Sbjct: 125 SLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSC 184

Query: 57  SRFISH-GAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           + FISH    +  IK   + +  L++   + + KG   N  TY  ++  L +  K    +
Sbjct: 185 NLFISHLSEDLDGIKIALKGEWVLKLIEEM-QIKGLKPNPYTYNGVILLLCKTGKVAEAE 243

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHF---SNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
            VLR+M  E       I+  L+  F    N S   R+ +   K     +  P     +  
Sbjct: 244 RVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK----RKISPDFITYTAV 299

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           +  L ++ +V +  + L +     RL+P+   +  LI  +CK G ++ AF +  +M +  
Sbjct: 300 ICGLCQTGRV-MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 358

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           ++ PN++TY+ L DGLCK G    A EL  EM  K   L +  TYN L++G C+ G +D+
Sbjct: 359 LT-PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL-NIYTYNSLVNGLCKAGNIDQ 416

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A K+M+ M+  G +P+   YTTLM+ +CK  ++  A E+  +M +  L+P  + +  L+N
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FC +G +++  +LLK M E+G   +  T+N ++   C    +     +   +   G+  
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y I++   C+   +++A  L R M+ +GF    ++ N L+    K     +A    
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 596

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             +   G   + + + +  ++     K+    EL DE + K
Sbjct: 597 EQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEK 637



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 153/270 (56%), Gaps = 1/270 (0%)

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           +DG+    +    ++L EEM  K  + P+  TYN +I   C+ GKV  A++++  M + G
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQIKG-LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 253

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             P+   YTTL++GFCK G +  A  +FDEM+   + PD I YT +I   C+ GRV EA 
Sbjct: 254 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 313

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +L  EM  +  + D VT+  ++ G C+EGK++EA  +  ++   G+  N  +Y  + +  
Sbjct: 314 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 373

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ GE++ A ELL  M  +G   +  T N L+  LCKAG  + A   +  +   GF P++
Sbjct: 374 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 433

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIKE 514
            ++  L++  C+ R+++ A ELL +++ +E
Sbjct: 434 VTYTTLMDAYCKSREMVRAHELLRQMLDRE 463



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 4/296 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  + D L +  + +  + +L +M  +  + +   + +L+         +
Sbjct: 356 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 415

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +++   +  +    P     +T ++   +S ++  A   L+       L+P    FN+
Sbjct: 416 QAVKLMKDME-VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR-ELQPTVVTFNV 473

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G LE   ++LK M +  +  PN  TY++LI   C     R   E++  M +K
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGI-MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             ++PD  TYN+LI G C+   +  A  +   M   G N  V +Y  L+ GF K  K  E
Sbjct: 533 G-VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 591

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           A+E+F++M+   L  D   Y    +     G+++  LEL  E  E+    DI T N
Sbjct: 592 ARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 220/421 (52%), Gaps = 4/421 (0%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T+ T+++ L    K      ++ +M    C+ +   + +++            
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L++  K+      K  +   ST ++ L     +D A +  K   +   +K +   +N L+
Sbjct: 190 LDLLRKMDE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFK-EMETKGIKSSLVTYNSLV 247

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G      ++LK+M   ++  PN+IT++ LID   K G+ +EA EL++EM++K  
Sbjct: 248 GGLCKAGKWNDGVQLLKDMTSRKI-IPNVITFNVLIDVFVKEGKLQEANELYKEMITK-G 305

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ +TYN L+DG+C   ++  A  +++ M  N C+P++  +T+L+ G+CK  ++ E  
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++F ++    L  +T+ Y+ L+  FC++G+++ A EL +EM   G   D++T+ I+L GL
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  GK+E+AL + E L    + L+   Y I++   C+ G++E A  L   + C+G  P+ 
Sbjct: 426 CDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 485

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T   ++  LCK G   +A I L  + E G +P   ++  L+    R   L  + +L++E
Sbjct: 486 MTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEE 545

Query: 510 L 510
           +
Sbjct: 546 M 546



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 206/407 (50%), Gaps = 4/407 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  TY +I++ + +         +LR+M     K     +  ++         +
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             + +F ++      K SL   ++ +  L ++ + +     LK      ++ PN   FN+
Sbjct: 223 AAISLFKEMET-KGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR-KIIPNVITFNV 280

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI    K G L+ A E+ KEM    +S PN ITY++L+DG C   R  EA  + + MV +
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGIS-PNTITYNSLMDGYCMQNRLSEANNMLDLMV-R 338

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           +   PD +T+  LI G+C+  +VD   K+   +   G   N   Y+ L+ GFC+ GKL+ 
Sbjct: 339 NNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEI 398

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E+F EM +  + PD + Y  L++  C  G++++ALE+ +++++     DIV + II+ 
Sbjct: 399 AEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIE 458

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C+ GK+E+A  +   L   G+  N  +Y ++++  C+KG L +A  LLR M   G  P
Sbjct: 459 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEP 518

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +  T N L+    + G    +A  +  +   GF  ++ S  ++++++
Sbjct: 519 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 181/353 (51%), Gaps = 5/353 (1%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PSL   S   + +  + Q +L  +F K    +  +  N    NI+I   C+     
Sbjct: 59  SRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELN-GIAHNIYTLNIMINCFCRCCKTC 117

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A+ VL ++ K  + Y P+  T++TLI+GLC   +  EA+ L   MV ++   P+ +TYN
Sbjct: 118 FAYSVLGKVMK--LGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV-ENGCQPNVVTYN 174

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            +++G C+ G    A  ++  M       +VF Y+T+++  C++G +  A  +F EM+  
Sbjct: 175 SIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 234

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            +K   + Y +L+   C+AG+ ++ ++LLK+M  R    +++TFN+++    +EGK++EA
Sbjct: 235 GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEA 294

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             + +++   GI  N  +Y  +++  C +  L +A  +L LM+     P   T   L+  
Sbjct: 295 NELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKG 354

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            CK    ++       + + G    + ++++LV+  C+  KL  A EL  E+V
Sbjct: 355 YCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 11/286 (3%)

Query: 238 LITYSTLIDG-LCKNGRFR---------EAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           L T S + DG +C   R R         +AI+LF+EM+ + + LP  + ++    G    
Sbjct: 20  LCTISGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMI-RSRPLPSLVDFSRFFSGVAST 78

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            + +      + M+ NG   N++    ++N FC+  K   A  V  ++     +PDT  +
Sbjct: 79  KQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 138

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            TLIN  C   +V EA+ L+  M E GC+ ++VT+N I+ G+C+ G    AL +L K+  
Sbjct: 139 NTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDE 198

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
             +  +  +Y  +++  C+ G ++ AI L + M  +G      T N L+  LCKAG   D
Sbjct: 199 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWND 258

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               L  +      P   ++ +L+++  +  KL  A EL  E++ K
Sbjct: 259 GVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK 304



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 149/312 (47%), Gaps = 25/312 (8%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG + N  TY +++D      +    + +L  M    C      F +L+K +      + 
Sbjct: 304 KGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDE 363

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCI 204
            +++F KI      K  L A +   ++L++    S ++++A+   +     L + P+   
Sbjct: 364 GMKLFRKI-----SKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ-EMVSLGVLPDVMT 417

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           + IL+   C  G LE A E+ ++++KS+M+  +++ Y+ +I+G+CK G+  +A  LF  +
Sbjct: 418 YGILLDGLCDNGKLEKALEIFEDLQKSKMNL-DIVMYTIIIEGMCKGGKVEDAWNLFCSL 476

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  + P+ +TY V+I G C+ G +  A  ++  M+ +G  PN   Y TL+    ++G 
Sbjct: 477 PCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGD 535

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE-------RGCKA 377
           L  + ++ +EMK+     D      +I+       +  A+   KE +        RG +A
Sbjct: 536 LTASAKLIEEMKSCGFSADASSIKMVID------MLSSAVWWFKEPRRSPGVKRFRGTQA 589

Query: 378 DIVTFNIILGGL 389
            ++ FN I   L
Sbjct: 590 YLMPFNTITASL 601


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 207/384 (53%), Gaps = 17/384 (4%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLK 190
           F +L+ H S  +L    L +F  +H   R  P      T  N +I S   + DLA+  L+
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMH---RHAPPAPTAPT-YNAVIRSLCRRADLARA-LR 174

Query: 191 YSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           Y +  +R   +P+   FN LI  +C+   ++ A ++  +M     +  ++++Y+TLI+GL
Sbjct: 175 YLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ-DVVSYATLIEGL 233

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C+ GR  EA+ELF EM   DQ  PD   Y  L+ G C   + +    ++  MK  G  P+
Sbjct: 234 CEAGRIDEAVELFGEM---DQ--PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPS 288

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
              Y  +++  C+E K +EA+E+  EM    L P  +  T +IN +C+ GR+ +AL +L+
Sbjct: 289 TRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE 348

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            MK RGCK ++ T+N ++ G C EGK+ +A+ +L K+   G+  +  +Y +++   C  G
Sbjct: 349 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 408

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSW 487
            +E A  LLRLM   G +    T N L+  LCK G   D A +LF  +E  G KP + ++
Sbjct: 409 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT-DQACSLFDSLETRGIKPNAVTF 467

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
             L+  +C+  K   A++ L+++V
Sbjct: 468 NSLINGLCKSGKADIAWKFLEKMV 491



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 203/434 (46%), Gaps = 8/434 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F  +           TY  ++  L R          L  M     +     F +L+
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             +   +  +   ++F K+ P+      + + +T +  L E+ ++D A       +Q   
Sbjct: 196 VGYCRTNQVDVARDLFDKM-PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ--- 251

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+  ++  L+K  C     E    +L+ MK+     P+   Y+ ++D  C+  + +EA
Sbjct: 252 --PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWR-PSTRAYAAVVDFRCRERKAKEA 308

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+ +EM  K  + P  +T   +I+ +C+ G++  A +++E MK  GC PNV+ Y  L+ 
Sbjct: 309 EEMLQEMFEKG-LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ 367

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC EGK+ +A  + ++M+   + PD + Y  LI   C  G ++ A  LL+ M+  G  A
Sbjct: 368 GFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 427

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+N ++  LC++G+ ++A  + + L   GI  N  ++  ++N  C+ G+ + A + L
Sbjct: 428 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 487

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G  P   T +  +  LCK   +++    +  +++   KP + ++ +++  + + 
Sbjct: 488 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 547

Query: 498 RKLLFAFELLDELV 511
           R          E+V
Sbjct: 548 RNYGLVARTWGEMV 561



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 208/477 (43%), Gaps = 62/477 (12%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQM---TYETCKFHEGIFLNLMKHFSNCSLH 146
           G+  +   YA ++D   R +K +  + +L++M       C       +N        S  
Sbjct: 284 GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 343

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            RVLE+      +   KP++   +  +       +V  A   L    +   + P+   +N
Sbjct: 344 LRVLELMK----LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN-KMRACGVNPDAVTYN 398

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +LI+  C  G +ESAF +L+ M+   +   +  TY+ LI+ LCK+GR  +A  LF+ + +
Sbjct: 399 LLIRGQCIDGHIESAFRLLRLMEGDGL-IADQYTYNALINALCKDGRTDQACSLFDSLET 457

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I P+A+T+N LI+G C+ GK D A K +E M + GC P+ + Y++ +   CK    Q
Sbjct: 458 RG-IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQ 516

Query: 327 EAKEVFDEM----------------------KNFLL-------------KPDTIGYTTLI 351
           E      EM                      +N+ L              PD + YTT +
Sbjct: 517 EGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSM 576

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             +C  GR++EA  +L EM + G   D + +N ++ G    G+ + A+ +L+++      
Sbjct: 577 RAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV 636

Query: 412 LNKASYRIVLN-----------FSCQKGELEKAIE------LLRLMLCRGFLPHYATSNE 454
            N+ +Y I+L                   + KAIE      L  +M    FLP+  T + 
Sbjct: 637 PNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSS 696

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +L    + G  E+A   +  + E       D +  LV   C+ ++ L A+ L+  ++
Sbjct: 697 ILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMI 753



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 53/381 (13%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP+    ++ +N L +S + D+A  FL+         P+T  ++  I+H CK    +   
Sbjct: 461 KPNAVTFNSLINGLCKSGKADIAWKFLE-KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519

Query: 223 EVLKEM-----KKSQMSY-----------------------------PNLITYSTLIDGL 248
             + EM     K S ++Y                             P+++TY+T +   
Sbjct: 520 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 579

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C  GR  EA  +  EM SK+ +  D + YN L+DG    G+ D A  I++ M +    PN
Sbjct: 580 CIEGRLNEAENVLMEM-SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 638

Query: 309 VFNYTTLMN-----------------GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            F Y  L+                  G  K  +L +   +FD MK     P++  Y++++
Sbjct: 639 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 698

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             F   GR +EA  L+  MKE     +   +  ++   C+  +  +A  ++  +   G  
Sbjct: 699 EGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFI 758

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
               SY+ +L+    +G+ +KA E+      + + P       ++  L K G ++ +   
Sbjct: 759 PQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREM 818

Query: 472 LFGLVEMGFKPESDSWALLVE 492
           +  L  M  +P   ++A+L E
Sbjct: 819 IIMLERMNCRPSHQTYAMLTE 839



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/381 (21%), Positives = 162/381 (42%), Gaps = 56/381 (14%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F+++ E +G   N  T+ ++++ L +  K +     L +M    C      + + +
Sbjct: 448 ACSLFDSL-ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 138 KHFSNCSLHERVL----EMFHK------------IHPITREK------------------ 163
           +H       +  L    EM  K            IH + +E+                  
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +T +       +++ A+N L   +++  +  +T  +N L+  H   G  + A  
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN-GVTVDTMAYNTLMDGHASIGQTDHAVS 625

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCK-----------NGRFREAIELFE-----EMVSK 267
           +LK+M  S  S PN  TY  L+  L +                +AIEL +     +++ K
Sbjct: 626 ILKQMT-SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 684

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           ++ LP++ TY+ +++GF   G+ + A  ++  MK +  + N   YT L+  FCK  +  +
Sbjct: 685 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 744

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +   M      P  + Y  L++     G+ D+A E+    + +    D + + +I+ 
Sbjct: 745 AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 804

Query: 388 GLCREGKIE---EALGMLEKL 405
           GL ++G  +   E + MLE++
Sbjct: 805 GLIKKGHSDISREMIIMLERM 825


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/298 (36%), Positives = 169/298 (56%), Gaps = 2/298 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN   +N +I   CK G +  A  VL+EM    ++ P+ + Y+TLIDG CK G    A
Sbjct: 319 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA-PDGVIYTTLIDGFCKLGNVSSA 377

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM  K +I PD +TY  +I G C+ G+V  A K+   M      P+   YT L++
Sbjct: 378 YRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CKEGK++EA  + ++M    L P+ + YT L +  C+ G VD A ELL EM  +G + 
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I T+N ++ GLC+ G I++A+ +++ +   G + +  +Y  +++  C+  E+ +A ELL
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           R ML R   P   T N L+   C +GM ED    L  ++E G  P + ++  L++  C
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 226/468 (48%), Gaps = 40/468 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F    E  G   N A+Y  I   L +  +      +L QM    C      +  ++
Sbjct: 237 ALKVFVEFPEV-GVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             +      +RVL++  ++  I   KP+    +  + LL ++ +V  A+  L+       
Sbjct: 296 NGYCQVGELQRVLKLIEEMQ-IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE-G 353

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+  I+  LI   CK G + SA+ +  EM+K ++S P+ ITY+ +I GLC+ GR  EA
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKIS-PDFITYTAVICGLCQTGRVMEA 412

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGK---------------------------- 289
            +LF EMV K ++ PD +TY  LIDG+C+ GK                            
Sbjct: 413 DKLFHEMVCK-RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 471

Query: 290 -------VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
                  VD A +++  M   G   N++ Y +L+NG CK G + +A ++  +M+     P
Sbjct: 472 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 531

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + YTTL++ +C++  +  A ELL++M +R  +  +VTFN+++ G C  G +E+   +L
Sbjct: 532 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 591

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +   GI  N  +Y  ++   C +  +    E+ R M  +G +P   T N L+   CKA
Sbjct: 592 KWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 651

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              ++A      +V  GF     S+  L++   + +K L A EL +++
Sbjct: 652 RNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 699



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 182/314 (57%), Gaps = 2/314 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT  +NI+    C+ G +  A ++L +M+  +   P++I+YST+I+G C+ G  +  ++L
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQME-LRGCIPDVISYSTVINGYCQVGELQRVLKL 310

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            EEM  K  + P+  TYN +I   C+ GKV  A++++  M + G  P+   YTTL++GFC
Sbjct: 311 IEEMQIKG-LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 369

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G +  A  +FDEM+   + PD I YT +I   C+ GRV EA +L  EM  +  + D V
Sbjct: 370 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 429

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+  ++ G C+EGK++EA  +  ++   G+  N  +Y  + +  C+ GE++ A ELL  M
Sbjct: 430 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +  T N L+  LCKAG  + A   +  +   GF P++ ++  L++  C+ R++
Sbjct: 490 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 549

Query: 501 LFAFELLDELVIKE 514
           + A ELL +++ +E
Sbjct: 550 VRAHELLRQMLDRE 563



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 204/428 (47%), Gaps = 10/428 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF---SNCSL 145
           KG   N  TY  ++  L +  K    + VLR+M  E       I+  L+  F    N S 
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 376

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
             R+ +   K     +  P     +  +  L ++ +V +  + L +     RL+P+   +
Sbjct: 377 AYRLFDEMQK----RKISPDFITYTAVICGLCQTGRV-MEADKLFHEMVCKRLEPDEVTY 431

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI  +CK G ++ AF +  +M +  ++ PN++TY+ L DGLCK G    A EL  EM 
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLT-PNIVTYTALADGLCKCGEVDTANELLHEMC 490

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K   L +  TYN L++G C+ G +D+A K+M+ M+  G +P+   YTTLM+ +CK  ++
Sbjct: 491 RKGLEL-NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 549

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A E+  +M +  L+P  + +  L+N FC +G +++  +LLK M E+G   +  T+N +
Sbjct: 550 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 609

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +   C    +     +   +   G+  +  +Y I++   C+   +++A  L R M+ +GF
Sbjct: 610 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 669

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
               ++ N L+    K     +A      +   G   + + + +  ++     K+    E
Sbjct: 670 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLE 729

Query: 506 LLDELVIK 513
           L DE + K
Sbjct: 730 LCDEAIEK 737



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 180/366 (49%), Gaps = 19/366 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F+ + ++K  + +  TY  ++  L +  +    D +  +M  +  +  E  +  L+
Sbjct: 377 AYRLFDEMQKRK-ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435

Query: 138 KHF-------SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
             +          SLH ++L+M           P++   +   + L +  +VD A   L 
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQM--------GLTPNIVTYTALADGLCKCGEVDTANELL- 486

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           +      L+ N   +N L+   CK G ++ A +++K+M+ +   +P+ +TY+TL+D  CK
Sbjct: 487 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF-HPDAVTYTTLMDAYCK 545

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           +     A EL  +M+ + ++ P  +T+NVL++GFC  G ++  +K++++M   G  PN  
Sbjct: 546 SREMVRAHELLRQMLDR-ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y +L+  +C    ++   E++  M    + PD   Y  LI   C+A  + EA  L ++M
Sbjct: 605 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 664

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             +G    + ++N ++ G  +  K  EA  + E++  +G+  ++  Y I  + +  +G++
Sbjct: 665 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 724

Query: 431 EKAIEL 436
           E  +EL
Sbjct: 725 ELTLEL 730



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 4/296 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  + D L +  + +  + +L +M  +  + +   + +L+         +
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 515

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +++   +  +    P     +T ++   +S ++  A   L+       L+P    FN+
Sbjct: 516 QAVKLMKDME-VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR-ELQPTVVTFNV 573

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G LE   ++LK M +  +  PN  TY++LI   C     R   E++  M +K
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGI-MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 632

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             ++PD  TYN+LI G C+   +  A  +   M   G N  V +Y  L+ GF K  K  E
Sbjct: 633 G-VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 691

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           A+E+F++M+   L  D   Y    +     G+++  LEL  E  E+    DI T N
Sbjct: 692 ARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 121/248 (48%), Gaps = 13/248 (5%)

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-------CNPNVFNYTTLMNGFCKEGKL 325
           D   +++        G +D A+K+ + M N G       CN  + + +  ++G      +
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDG------I 234

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A +VF E     +  +T  Y  + +  C+ GRV EA +LL +M+ RGC  D+++++ +
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G C+ G+++  L ++E++   G+  N  +Y  V+   C+ G++ +A  +LR M+  G 
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P       L+   CK G    A      + +    P+  ++  ++  +C+  +++ A +
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414

Query: 506 LLDELVIK 513
           L  E+V K
Sbjct: 415 LFHEMVCK 422


>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 228/461 (49%), Gaps = 49/461 (10%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           + +PP  ++      RKR  F++       +K  ++P  AL +FN   +Q GF H+  +Y
Sbjct: 367 RREPPHRSTSRL---RKRIPFLAD------LKSVQDPDDALSLFNQY-QQMGFKHDYPSY 416

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
           + ++ KLAR + FEAV+ +L  +     +  E +F+ L++H+    + E+ +E+F ++ P
Sbjct: 417 SALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAIELFQRM-P 475

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
                 ++ + +T LN+L+E ++   A      S + +  + N+  FNI+IK    +G  
Sbjct: 476 SFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRSTK-MGFRRNSISFNIIIKGWLGKGEW 534

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           + A++V +EM   ++  P ++T+++LI  LC  G    A+ L Z+M+ K    P+A+TY 
Sbjct: 535 DKAWQVFEEMIDKEVK-PTVVTFNSLIGFLCGKGDLDGAMGLLZDMIQKRH-RPNAVTYA 592

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           +L++G C  GK   AKK+M  M   GC P + N+  LM+   + G++ + K +  EMK  
Sbjct: 593 LLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRR 652

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
             KPD + Y  LIN  C+ GR  EA ++L EM+  GC+ +  T+ +++ G          
Sbjct: 653 RFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGF--------- 703

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
                                     CQ  + E  +++L  ML  G  P   +  +L+V 
Sbjct: 704 --------------------------CQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVG 737

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           L K G  + A   L  + +   +   ++W  LV+  C G +
Sbjct: 738 LLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDR 778



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 137/278 (49%), Gaps = 4/278 (1%)

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           YP   +YS L+  L ++  F EA+E   + +    I      +  LI  + +    ++A 
Sbjct: 413 YP---SYSALVYKLARSRNF-EAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAI 468

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           ++ + M +  C+  + ++ TL+N   +  +  +A  +FD       + ++I +  +I  +
Sbjct: 469 ELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGW 528

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
              G  D+A ++ +EM ++  K  +VTFN ++G LC +G ++ A+G+LZ +       N 
Sbjct: 529 LGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLZDMIQKRHRPNA 588

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y +++   C  G+ ++A +++  M  +G  P       L+  L + G  +D    L  
Sbjct: 589 VTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLE 648

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           +    FKP+  ++ +L+  +C+  +   A+++L E+ +
Sbjct: 649 MKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQV 686


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 222/430 (51%), Gaps = 18/430 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
           + G+  +  T+ T++  L  + K     A++ +M    C+      G+ +N +    +  
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 204

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
           L    L + +K+     E   ++A     N +I+S      VD A N  K   +   ++P
Sbjct: 205 L---ALNLLNKM-----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRP 255

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   ++ LI   C  G    A ++L +M + +++ PNL+T++ LID   K G+F EA +L
Sbjct: 256 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           +++M+ K  I PD  TYN L++GFC   ++D+AK++ EFM +  C P+V  Y TL+ GFC
Sbjct: 315 YDDMI-KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 373

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  ++++  E+F EM +  L  DT+ YTTLI      G  D A ++ K+M   G   DI+
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++I+L GLC  GK+E+AL + + +    I L+   Y  ++   C+ G+++   +L   +
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 493

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G  P+  T N ++  LC   + ++A   L  + E G  P S ++  L+    R    
Sbjct: 494 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 553

Query: 501 LFAFELLDEL 510
             + EL+ E+
Sbjct: 554 AASAELIREM 563



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 175/355 (49%), Gaps = 39/355 (10%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   + +++   CKRG  + A  +L +M+ +++   +++ ++T+ID LCK     +A+
Sbjct: 184 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHVDDAL 242

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            LF+EM +K  I P+ +TY+ LI   C  G+   A +++  M     NPN+  +  L++ 
Sbjct: 243 NLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 301

Query: 319 FCKEGKLQEAKEVFDEM-----------KNFLLK------------------------PD 343
           F KEGK  EA++++D+M            N L+                         PD
Sbjct: 302 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y TLI  FC++ RV++  EL +EM  RG   D VT+  ++ GL  +G  + A  + +
Sbjct: 362 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 421

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  DG+  +  +Y I+L+  C  G+LEKA+E+   M              ++  +CKAG
Sbjct: 422 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 481

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
             +D       L   G KP   ++  ++  +C  R L  A+ LL ++  KE G +
Sbjct: 482 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPL 534



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 157/294 (53%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ A  +   M KS+   P+++ ++ L+  + K  +F   I L E+M  + +I+    TY
Sbjct: 28  LDDAIGLFGGMVKSR-PLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTY 85

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N+LI+ FCR  ++  A  ++  M   G  P++   ++L+NG+C   ++ +A  + D+M  
Sbjct: 86  NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 145

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +PDTI +TTLI+      +  EA+ L+  M +RGC+ ++VT+ +++ GLC+ G  + 
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +L K+    I  +   +  +++  C+   ++ A+ L + M  +G  P+  T + L+ 
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P   ++  L++   +  K + A +L D+++
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 40/369 (10%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   +  L+ + +  + D+  + L    Q L +      +NILI   C+R  + 
Sbjct: 41  SRPLPSIVEFNKLLSAIAKMKKFDVVIS-LGEKMQRLEIVHGLYTYNILINCFCRRSQIS 99

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A  +L +M K  + Y P+++T S+L++G C   R  +A+ L ++MV      PD +T+ 
Sbjct: 100 LALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFT 156

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG----------KLQEA 328
            LI G     K   A  +++ M   GC PN+  Y  ++NG CK G          K++ A
Sbjct: 157 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 216

Query: 329 K-------------------------EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           K                          +F EM+   ++P+ + Y++LI+C C  GR  +A
Sbjct: 217 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 276

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            +LL +M E+    ++VTFN ++    +EGK  EA  + + +    I  +  +Y  ++N 
Sbjct: 277 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 336

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C    L+KA ++   M+ +   P   T N L+   CK+   ED       +   G   +
Sbjct: 337 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 396

Query: 484 SDSWALLVE 492
           + ++  L++
Sbjct: 397 TVTYTTLIQ 405



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 155/315 (49%), Gaps = 2/315 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FN L+    K    +    + ++M++ ++ +  L TY+ LI+  C+  +   A+ 
Sbjct: 45  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-GLYTYNILINCFCRRSQISLALA 103

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  +M+ K    P  +T + L++G+C G ++  A  +++ M   G  P+   +TTL++G 
Sbjct: 104 LLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 162

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
               K  EA  + D M     +P+ + Y  ++N  C+ G  D AL LL +M+    +AD+
Sbjct: 163 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 222

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V FN I+  LC+   +++AL + +++   GI  N  +Y  +++  C  G    A +LL  
Sbjct: 223 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 282

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +   P+  T N L+    K G   +A      +++    P+  ++  LV   C   +
Sbjct: 283 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 342

Query: 500 LLFAFELLDELVIKE 514
           L  A ++ + +V K+
Sbjct: 343 LDKAKQMFEFMVSKD 357



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 131/263 (49%), Gaps = 3/263 (1%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI LF  MV K + LP  + +N L+    +  K D    + E M+       ++ Y
Sbjct: 27  KLDDAIGLFGGMV-KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTY 85

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L+N FC+  ++  A  +  +M     +P  +  ++L+N +C   R+ +A+ L+ +M E
Sbjct: 86  NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 145

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + D +TF  ++ GL    K  EA+ +++++   G   N  +Y +V+N  C++G+ + 
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLV 491
           A+ LL  M            N ++  LCK    +D A+ LF  +E  G +P   +++ L+
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETKGIRPNVVTYSSLI 264

Query: 492 ELICRGRKLLFAFELLDELVIKE 514
             +C   +   A +LL +++ K+
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKK 287



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 89/200 (44%)

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +Y  ++     + KL +A  +F  M      P  + +  L++   +  + D  + L ++M
Sbjct: 14  DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 73

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +       + T+NI++   CR  +I  AL +L K+   G   +  +   +LN  C    +
Sbjct: 74  QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 133

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+ L+  M+  G+ P   T   L+  L     A +A   +  +V+ G +P   ++ ++
Sbjct: 134 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 193

Query: 491 VELICRGRKLLFAFELLDEL 510
           V  +C+      A  LL+++
Sbjct: 194 VNGLCKRGDTDLALNLLNKM 213


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 222/430 (51%), Gaps = 18/430 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
           + G+  +  T+ T++  L  + K     A++ +M    C+      G+ +N +    +  
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
           L    L + +K+     E   ++A     N +I+S      VD A N  K   +   ++P
Sbjct: 243 L---ALNLLNKM-----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRP 293

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   ++ LI   C  G    A ++L +M + +++ PNL+T++ LID   K G+F EA +L
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKL 352

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           +++M+ K  I PD  TYN L++GFC   ++D+AK++ EFM +  C P+V  Y TL+ GFC
Sbjct: 353 YDDMI-KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  ++++  E+F EM +  L  DT+ YTTLI      G  D A ++ K+M   G   DI+
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++I+L GLC  GK+E+AL + + +    I L+   Y  ++   C+ G+++   +L   +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G  P+  T N ++  LC   + ++A   L  + E G  P S ++  L+    R    
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591

Query: 501 LFAFELLDEL 510
             + EL+ E+
Sbjct: 592 AASAELIREM 601



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 175/355 (49%), Gaps = 39/355 (10%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   + +++   CKRG  + A  +L +M+ +++   +++ ++T+ID LCK     +A+
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHVDDAL 280

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            LF+EM +K  I P+ +TY+ LI   C  G+   A +++  M     NPN+  +  L++ 
Sbjct: 281 NLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339

Query: 319 FCKEGKLQEAKEVFDEM-----------KNFLLK------------------------PD 343
           F KEGK  EA++++D+M            N L+                         PD
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y TLI  FC++ RV++  EL +EM  RG   D VT+  ++ GL  +G  + A  + +
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  DG+  +  +Y I+L+  C  G+LEKA+E+   M              ++  +CKAG
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
             +D       L   G KP   ++  ++  +C  R L  A+ LL ++  KE G +
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPL 572



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 157/294 (53%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ A  +   M KS+   P+++ ++ L+  + K  +F   I L E+M  + +I+    TY
Sbjct: 66  LDDAIGLFGGMVKSR-PLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTY 123

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N+LI+ FCR  ++  A  ++  M   G  P++   ++L+NG+C   ++ +A  + D+M  
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +PDTI +TTLI+      +  EA+ L+  M +RGC+ ++VT+ +++ GLC+ G  + 
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +L K+    I  +   +  +++  C+   ++ A+ L + M  +G  P+  T + L+ 
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P   ++  L++   +  K + A +L D+++
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 40/369 (10%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   +  L+ + +  + D+  + L    Q L +      +NILI   C+R  + 
Sbjct: 79  SRPLPSIVEFNKLLSAIAKMKKFDVVIS-LGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A  +L +M K  + Y P+++T S+L++G C   R  +A+ L ++MV      PD +T+ 
Sbjct: 138 LALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFT 194

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG----------KLQEA 328
            LI G     K   A  +++ M   GC PN+  Y  ++NG CK G          K++ A
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254

Query: 329 K-------------------------EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           K                          +F EM+   ++P+ + Y++LI+C C  GR  +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            +LL +M E+    ++VTFN ++    +EGK  EA  + + +    I  +  +Y  ++N 
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C    L+KA ++   M+ +   P   T N L+   CK+   ED       +   G   +
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434

Query: 484 SDSWALLVE 492
           + ++  L++
Sbjct: 435 TVTYTTLIQ 443



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 156/318 (49%), Gaps = 2/318 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R  P+   FN L+    K    +    + ++M++ ++ +  L TY+ LI+  C+  +   
Sbjct: 80  RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-GLYTYNILINCFCRRSQISL 138

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L  +M+ K    P  +T + L++G+C G ++  A  +++ M   G  P+   +TTL+
Sbjct: 139 ALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G     K  EA  + D M     +P+ + Y  ++N  C+ G  D AL LL +M+    +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           AD+V FN I+  LC+   +++AL + +++   GI  N  +Y  +++  C  G    A +L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M+ +   P+  T N L+    K G   +A      +++    P+  ++  LV   C 
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377

Query: 497 GRKLLFAFELLDELVIKE 514
             +L  A ++ + +V K+
Sbjct: 378 HDRLDKAKQMFEFMVSKD 395



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 131/263 (49%), Gaps = 3/263 (1%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI LF  MV K + LP  + +N L+    +  K D    + E M+       ++ Y
Sbjct: 65  KLDDAIGLFGGMV-KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTY 123

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L+N FC+  ++  A  +  +M     +P  +  ++L+N +C   R+ +A+ L+ +M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + D +TF  ++ GL    K  EA+ +++++   G   N  +Y +V+N  C++G+ + 
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLV 491
           A+ LL  M            N ++  LCK    +D A+ LF  +E  G +P   +++ L+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETKGIRPNVVTYSSLI 302

Query: 492 ELICRGRKLLFAFELLDELVIKE 514
             +C   +   A +LL +++ K+
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKK 325



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 89/200 (44%)

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +Y  ++     + KL +A  +F  M      P  + +  L++   +  + D  + L ++M
Sbjct: 52  DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +       + T+NI++   CR  +I  AL +L K+   G   +  +   +LN  C    +
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+ L+  M+  G+ P   T   L+  L     A +A   +  +V+ G +P   ++ ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231

Query: 491 VELICRGRKLLFAFELLDEL 510
           V  +C+      A  LL+++
Sbjct: 232 VNGLCKRGDTDLALNLLNKM 251


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 243/490 (49%), Gaps = 50/490 (10%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H AA+  I+ + +P  AL++FN V  + GF H   TY  +++KL  + KFEA++ VL +M
Sbjct: 9   HVAAV--IRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM 66

Query: 122 TYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
                 K  EG+++ +M+ +      +  + +F ++     E PS+++ +  +N+L+E  
Sbjct: 67  RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCE-PSVQSYNAIMNILVEYG 125

Query: 181 QVDLAQNFLKYSNQHLRLK-----PNTCIFNILIKHHCKRGTLESAFEVLKEMKK----- 230
               A         ++R+K     P+     I +K  C  G   +A  +L  M       
Sbjct: 126 YFSQAHKV------YMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF 179

Query: 231 SQMSY-----------------------------PNLITYSTLIDGLCKNGRFREAIELF 261
           + +SY                             P+++T++ LI  LCK G  +E+ +LF
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            + V K  + P+  T+N+ I G CR G +D A +++E + + G  P+V +Y TL+ GFCK
Sbjct: 240 SK-VMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             KL EA+    +M N  ++P+   Y T+IN FC+AG +  A ++L++   +G   D  T
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ ++ GLC +G +  A+ +  +    G   +   Y  ++    ++G + +A++L++ M+
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P   T N ++  LCK G   DA   L   +  G  P+  ++  L++  C+ R + 
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478

Query: 502 FAFELLDELV 511
            A E+LD ++
Sbjct: 479 KAIEILDTML 488



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 225/460 (48%), Gaps = 29/460 (6%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILD---------KLARYKKF------EAVD 115
           CE   Q    I N + E   F+  +  Y  + D            R K F       A  
Sbjct: 107 CEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAAL 166

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHF--SNCSLHERVLEMFHKIHPITREK--PSLKAIST 171
            +L  M  + C+F+   +  ++  F   NC +     E +H    + ++   P +   + 
Sbjct: 167 RLLNNMPGQGCEFNAVSYCAVISGFYKENCQI-----EAYHLFDEMLKQGICPDILTFNK 221

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
            +++L +   V  ++    +S    R + PN   FNI I+  C++G ++ A  +L+ +  
Sbjct: 222 LIHVLCKKGNVQESEKL--FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVS 279

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             ++ P++I+Y+TLI G CK+ +  EA     +MV+   + P+  TYN +I+GFC+ G +
Sbjct: 280 EGLT-PDVISYNTLICGFCKHSKLVEAECYLHKMVNSG-VEPNEFTYNTIINGFCKAGMM 337

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
             A KI+      G  P+ F Y++L+NG C +G +  A  VF E      K   I Y TL
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTL 397

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +    + G V +AL+L+K+M E GC  DI T+N+++ GLC+ G + +A G+L      G 
Sbjct: 398 VKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  ++  +++  C++  ++KAIE+L  ML  G  P   T N LL  LCKA   ++   
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
               ++E G  P   ++ +L+E  C+ RK+  A EL  E+
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 188/395 (47%), Gaps = 5/395 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY TI++   +    +  D +LR   ++     E  + +L+    N     R 
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           + +F++       K S+   +T +  L +   V  A   +K   +H    P+   +N+++
Sbjct: 376 MAVFYEAME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH-GCSPDIWTYNLVV 433

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G L  A  +L +   ++   P++ T++TLIDG CK     +AIE+ + M+S   
Sbjct: 434 NGLCKMGCLSDANGILND-AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG- 491

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I PD +TYN L++G C+  K+D      + M   GC PN+  Y  L+  FCK+ K+ EA 
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERGCKADIVTFNIILGG 388
           E+F EMK   L PD +   TLI   C  G +D+A EL   + KE         FNI++  
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C +  +  A  +  K+       +  +YR++++  C+ G ++ A   L   + +G +P 
Sbjct: 612 FCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           + T  ++L  LC      +A + +  +V+ G  PE
Sbjct: 672 FTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 201/430 (46%), Gaps = 17/430 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  +Y T++    ++ K    +  L +M     + +E  +  ++  F        
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG---- 335

Query: 149 VLEMFHKIHPITREK------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
              M      I R+       P     S+ +N L     ++ A     Y       K + 
Sbjct: 336 ---MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF-YEAMEKGFKHSI 391

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
            ++N L+K   K+G +  A +++K+M +   S P++ TY+ +++GLCK G   +A  +  
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS-PDIWTYNLVVNGLCKMGCLSDANGILN 450

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           + ++K  I PD  T+N LIDG+C+   +D+A +I++ M ++G  P+V  Y TL+NG CK 
Sbjct: 451 DAIAKGCI-PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            KL    + F  M      P+ I Y  LI  FC+  +V EA+EL KEMK RG   DIVT 
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL 569

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIY-LNKASYRIVLNFSCQKGELEKAIELLRLML 441
             ++ GLC  G++++A  +   +  +  +  + A + I++N  C+K  +  A +L   M 
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMG 629

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
                P   T   ++   CK G  + A   L   +  G  P   +   ++  +C   +L 
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689

Query: 502 FAFELLDELV 511
            A  +++ +V
Sbjct: 690 EAVVIINLMV 699



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 8/299 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++   + E  G + +  TY  +++ L +       + +L     + C      F  L+
Sbjct: 410 ALQLMKDMMEH-GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             +      ++ +E+   +  H IT   P +   +T LN L ++ ++D   +  K +   
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGIT---PDVITYNTLLNGLCKARKLDNVVDTFK-AMLE 524

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               PN   +NILI+  CK   +  A E+ KEMK   ++ P+++T  TLI GLC NG   
Sbjct: 525 KGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT-PDIVTLCTLICGLCSNGELD 583

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A ELF  +  + +       +N++I+ FC    V  A+K+   M  + C P+ + Y  +
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ +CK G +  A     E  +  L P       ++NC C   R+ EA+ ++  M + G
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 225/463 (48%), Gaps = 24/463 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           ++   K+ +  ++ F  +S++  + HN   + ++L++L R + F   D + R +  + C+
Sbjct: 81  IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-RILMIKACR 139

Query: 128 FHEGI-----FLNLMKH----FSNCSLHERVL-----EMFHKIHPITRE------KPSLK 167
             E I     FLN +      FS  S +  ++     EM      + ++      +PSL 
Sbjct: 140 NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLL 199

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
             +T +N+L +  +V  A+  L    Q+  L P+   +  LI  HC+   L+ AF V   
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQY-DLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 258

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M K     PN +TYSTLI+GLC  GR  EA+++ EEM+ K  I P   TY + I   C  
Sbjct: 259 MVKEGCD-PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG-IEPTVYTYTLPITALCAI 316

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
              + A +++  MK  GC PNV  YT L++G  + GKL+ A  ++ +M    L P+T+ Y
Sbjct: 317 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 376

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             LIN  C  GR   AL++   M+  G  A+  T+N I+ GLC  G IE+A+ + EK+  
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G      +Y  ++N    KG +  A  LL LM   G  P   T NEL+    K G  E 
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           A+     +VE G  P   S+  L++   +  K+  A  LL  +
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 172/314 (54%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PNT  +N LI   C  G   +A ++   M+    S  N  TY+ +I GLC  G   +A
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGSLANTQTYNEIIKGLCLGGDIEKA 427

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LFE+M+ K   LP  +TYN LI+G+   G V+ A ++++ MK NGC P+ + Y  L++
Sbjct: 428 MVLFEKML-KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF K GKL+ A   F EM    L P+ + YT LI+   + G+VD AL LLK M+E GC  
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ ++N ++ GL +E +  EA  + +K+   G+  N  +Y  +++  C+ G  + A ++ 
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  R  LP+  T + L+  LC+ G A++A I L  +   G  P+  ++  L++     
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVL 666

Query: 498 RKLLFAFELLDELV 511
            ++  AF LL  +V
Sbjct: 667 GRIDHAFLLLRRMV 680



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 192/379 (50%), Gaps = 12/379 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   N  TY  ++  L+R  K E    +  +M  E    +   +  L+         
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 147 ERVLEMFHKI--HPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
              L++FH +  H       +   I    CL   IE   V L +  LK         P  
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV-LFEKMLKMGPL-----PTV 443

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N LI  +  +G + +A  +L  MK++    P+  TY+ L+ G  K G+   A   F+
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCE-PDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EMV +  + P+ ++Y  LIDG  + GKVD A  +++ M+  GCNPNV +Y  ++NG  KE
Sbjct: 503 EMV-ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKE 561

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            +  EA+++ D+M    L P+ I YTTLI+  CR GR   A ++  +M++R C  ++ T+
Sbjct: 562 NRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           + ++ GLC+EGK +EA  +L+++   G+  ++ ++  +++     G ++ A  LLR M+ 
Sbjct: 622 SSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVD 681

Query: 443 RGFLPHYATSNELLVRLCK 461
            G  P+Y T + LL  L K
Sbjct: 682 MGCKPNYRTYSVLLKGLQK 700



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 120/195 (61%), Gaps = 2/195 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +  LI  H K G ++ A  +LK M++   + PN+ +Y+ +I+GL K  RF EA
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN-PNVESYNAVINGLSKENRFSEA 567

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ ++MV +  +LP+ +TY  LIDG CR G+   A KI   M+   C PN++ Y++L+ 
Sbjct: 568 EKICDKMVEQG-LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+EGK  EA+ +  EM+   L PD + +T+LI+ F   GR+D A  LL+ M + GCK 
Sbjct: 627 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKP 686

Query: 378 DIVTFNIILGGLCRE 392
           +  T++++L GL +E
Sbjct: 687 NYRTYSVLLKGLQKE 701



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 4/177 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++++ +  +N L + N+   A+       +   L PN   +  LI   C+ G  + AF+
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQ-GLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  +M+K +   PNL TYS+LI GLC+ G+  EA  L +EM  K  + PD +T+  LIDG
Sbjct: 605 IFHDMEKRK-CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG-LAPDEVTFTSLIDG 662

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           F   G++D A  ++  M + GC PN   Y+ L+ G  KE  L E K +F  + N+ L
Sbjct: 663 FVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEK-IFPLVDNYFL 718



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 120/246 (48%), Gaps = 1/246 (0%)

Query: 267 KDQILPDALTYNVLIDGFCRGGK-VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +D++   A    +L+   CR  + + R    +  +   G   ++++  TL+    K   +
Sbjct: 120 RDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMV 179

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A+ ++ +M N  ++P  + + TLIN   + G+V EA  +L ++ +     D+ T+  +
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G CR   ++ A G+ +++  +G   N  +Y  ++N  C +G +++A+++L  M+ +G 
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   T    +  LC     E+A   +  + + G +P   ++  L+  + R  KL  A  
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359

Query: 506 LLDELV 511
           L  +++
Sbjct: 360 LYHKML 365


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 225/463 (48%), Gaps = 24/463 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           ++   K+ +  ++ F  +S++  + HN   + ++L++L R + F   D + R +  + C+
Sbjct: 81  IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI-RILMIKACR 139

Query: 128 FHEGI-----FLNLMKH----FSNCSLHERVL-----EMFHKIHPITRE------KPSLK 167
             E I     FLN +      FS  S +  ++     EM      + ++      +PSL 
Sbjct: 140 NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLL 199

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
             +T +N+L +  +V  A+  L    Q+  L P+   +  LI  HC+   L+ AF V   
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQY-DLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 258

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M K     PN +TYSTLI+GLC  GR  EA+++ EEM+ K  I P   TY + I   C  
Sbjct: 259 MVKEGCD-PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG-IEPTVYTYTLPITALCAI 316

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
              + A +++  MK  GC PNV  YT L++G  + GKL+ A  ++ +M    L P+T+ Y
Sbjct: 317 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 376

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             LIN  C  GR   AL++   M+  G  A+  T+N I+ GLC  G IE+A+ + EK+  
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G      +Y  ++N    KG +  A  LL LM   G  P   T NEL+    K G  E 
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           A+     +VE G  P   S+  L++   +  K+  A  LL  +
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 178/319 (55%), Gaps = 8/319 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PNT  +N LI   C  G   +A ++   M+    S  N  TY+ +I GLC  G   +A
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGSLANTQTYNEIIKGLCLGGDIEKA 427

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LFE+M+ K   LP  +TYN LI+G+   G V+ A ++++ MK NGC P+ + Y  L++
Sbjct: 428 MVLFEKML-KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF K GKL+ A   F EM    L P+ + YT LI+   + G+VD AL LLK M+E GC  
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ ++N ++ GL +E +  EA  + +K+   G+  N  +Y  +++  C+ G  + A ++ 
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  R  LP+  T + L+  LC+ G A++A      + E+G +P  D+++ LV  +CR 
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRK 662

Query: 498 RKLLFAFELLDELVIKESG 516
            +   A +L+ ++  KE G
Sbjct: 663 GRFYEAEQLVKDM--KERG 679



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 214/433 (49%), Gaps = 18/433 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   N  TY  ++  L+R  K E    +  +M  E    +   +  L+         
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 147 ERVLEMFHKI--HPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
              L++FH +  H       +   I    CL   IE   V L +  LK         P  
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV-LFEKMLKMGPL-----PTV 443

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N LI  +  +G + +A  +L  MK++    P+  TY+ L+ G  K G+   A   F+
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCE-PDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EMV +  + P+ ++Y  LIDG  + GKVD A  +++ M+  GCNPNV +Y  ++NG  KE
Sbjct: 503 EMV-ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKE 561

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            +  EA+++ D+M    L P+ I YTTLI+  CR GR   A ++  +M++R C  ++ T+
Sbjct: 562 NRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           + ++ GLC+EGK +EA    E++   G      +Y  +++  C+KG   +A +L++ M  
Sbjct: 622 SSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKE 677

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLL 501
           RGF P       LL+  CK  +  D A+ +F  +E  GF+     +  L+  +C+  ++ 
Sbjct: 678 RGFCPDREIYYSLLIAHCK-NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736

Query: 502 FAFELLDELVIKE 514
            A  L D ++ KE
Sbjct: 737 EAQALFDNMLEKE 749



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 183/360 (50%), Gaps = 16/360 (4%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY T+++             +L  M    C+  E  +  L+  FS     E     F +
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +       P+  + +  ++   +  +VD+A + LK   + +   PN   +N +I    K 
Sbjct: 504 MVECGL-NPNPVSYTALIDGHSKDGKVDIALSLLK-RMEEMGCNPNVESYNAVINGLSKE 561

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
                A ++  +M + Q   PN+ITY+TLIDGLC+NGR + A ++F +M  K + LP+  
Sbjct: 562 NRFSEAEKICDKMVE-QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLY 619

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TY+ LI G C+ GK D A+++ E     GC P +  Y+TL++G C++G+  EA+++  +M
Sbjct: 620 TYSSLIYGLCQEGKADEAERMSEI----GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           K     PD   Y +L+   C+   VD AL++   ++ +G +  +  +  ++  LC+ G++
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 735

Query: 396 EEALG----MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           EEA      MLEK W      ++  + ++++   ++GEL+  ++LL +M  + F P+  T
Sbjct: 736 EEAQALFDNMLEKEWNA----DEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 791



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 32/272 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++++ +  +N L + N+   A+       +   L PN   +  LI   C+ G  + AF+
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQ-GLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 224 VLKEMKK----------SQMSY--------------------PNLITYSTLIDGLCKNGR 253
           +  +M+K          S + Y                    P L TYSTL+ GLC+ GR
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGR 664

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F EA +L ++M  +    PD   Y  L+   C+  +VD A KI   ++  G   ++  Y 
Sbjct: 665 FYEAEQLVKDMKERG-FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 723

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+   CK G+++EA+ +FD M       D I +T L++   + G +D  ++LL  M+ +
Sbjct: 724 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
               +I T+ I+   L R GK  E+  + +KL
Sbjct: 784 NFTPNIQTYVILGRELSRIGKSIESEPLADKL 815



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 120/246 (48%), Gaps = 1/246 (0%)

Query: 267 KDQILPDALTYNVLIDGFCRGGK-VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +D++   A    +L+   CR  + + R    +  +   G   ++++  TL+    K   +
Sbjct: 120 RDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMV 179

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A+ ++ +M N  ++P  + + TLIN   + G+V EA  +L ++ +     D+ T+  +
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G CR   ++ A G+ +++  +G   N  +Y  ++N  C +G +++A+++L  M+ +G 
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   T    +  LC     E+A   +  + + G +P   ++  L+  + R  KL  A  
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359

Query: 506 LLDELV 511
           L  +++
Sbjct: 360 LYHKML 365



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 129/290 (44%), Gaps = 18/290 (6%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH---FSNC 143
           E+ G N N  +Y  +++ L++  +F   + +  +M        +G+  N++ +       
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV------EQGLLPNVITYTTLIDGL 593

Query: 144 SLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN 201
             + R    F   H + + K  P+L   S+ +  L +  + D A+         +  +P 
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM-----SEIGCEPT 648

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              ++ L+   C++G    A +++K+MK+        I YS LI   CKN     A+++F
Sbjct: 649 LDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI-AHCKNLEVDHALKIF 707

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
             + +K   L  ++ Y  LI   C+ G+V+ A+ + + M     N +   +T L++G  K
Sbjct: 708 HSIEAKGFQLHLSI-YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 766

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           EG+L    ++   M++    P+   Y  L     R G+  E+  L  ++K
Sbjct: 767 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 9/276 (3%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           S+ A I+ +  E     A +I + + EQ G   N  TY T++D L R  + +    +   
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQ-GLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 608

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           M    C  +   + +L+  +  C   E   +   ++  I  E P+L   ST ++ L    
Sbjct: 609 MEKRKCLPNLYTYSSLI--YGLC--QEGKADEAERMSEIGCE-PTLDTYSTLVSGLCRKG 663

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           +   A+  +K   +     P+  I+  L+  HCK   ++ A ++   ++       +L  
Sbjct: 664 RFYEAEQLVKDMKER-GFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL-HLSI 721

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y  LI  LCK G+  EA  LF+ M+ K+    D + + VL+DG  + G++D   K++  M
Sbjct: 722 YRALICALCKAGQVEEAQALFDNMLEKEWN-ADEIVWTVLVDGLLKEGELDLCMKLLHIM 780

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           ++    PN+  Y  L     + GK  E++ + D++K
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816


>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
          Length = 418

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 213/399 (53%), Gaps = 8/399 (2%)

Query: 67  SLIKCEKEPQCALEIF-NTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           SL++ +  P+ AL++F N   + K F + + +Y  I+ KL R + F  ++ +L Q+  ET
Sbjct: 14  SLLRLQNGPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEMEQILSQLRRET 73

Query: 126 CKFH--EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
            +F   E IF N++  +    L +R ++ F  I P  R + ++K++++ LN L+   + +
Sbjct: 74  -RFSPKEIIFCNVISFYGRARLPDRAIQTFESI-PEFRCQRTVKSLNSLLNALLNCKEFE 131

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
                L   ++     PN C +NILI   C  G L  A+ V  EM +  +  PN++T+ T
Sbjct: 132 KFDGILSGIDKFA--TPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVC-PNVVTFGT 188

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI GLC++ R  EA  L E+MV    + P+A  Y  L+ G CR  ++  A ++ + M  N
Sbjct: 189 LISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN 248

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
               +   Y+TL+    K G+  E   V +EM+    KPDT+ Y  +I+ FC     + A
Sbjct: 249 KLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAA 308

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             +L+EM  +GCK D++++N+I+ GLC+EGK  EA  + E +   G   +  SYRI+ + 
Sbjct: 309 YGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDG 368

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            C+  +  +A  +L  M+ +G+ P  A+  + +  LC  
Sbjct: 369 LCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALCSG 407



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 124/243 (51%), Gaps = 1/243 (0%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+  TYN+LI+  C  G++  A  + + M      PNV  + TL++G C++ +L EA  +
Sbjct: 146 PNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRL 205

Query: 332 FDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
            ++M K F +KP+   Y +L+   CR   +  A EL KEM     + D   ++ ++  L 
Sbjct: 206 KEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALF 265

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + G+ +E   +LE++  +G   +  +Y  +++  C + + E A  +L  M+ +G  P   
Sbjct: 266 KVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVI 325

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           + N ++  LCK G   +A      +   G  P+  S+ +L + +C G +   A  +LDE+
Sbjct: 326 SYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEM 385

Query: 511 VIK 513
           V K
Sbjct: 386 VFK 388



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+T  +N +I   C     E+A+ VL+EM   +   P++I+Y+ +I GLCK G++REA 
Sbjct: 286 KPDTVTYNAMISGFCNEKDFEAAYGVLEEMV-VKGCKPDVISYNVIISGLCKEGKWREAN 344

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LFE+M  +    PD  +Y +L DG C G + + A  I++ M   G  P   + T  +  
Sbjct: 345 DLFEDM-PRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEA 403

Query: 319 FCKEGKLQEAKEVFD 333
            C   +L    + F+
Sbjct: 404 LCSGRELGVVVQSFE 418


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 215/438 (49%), Gaps = 10/438 (2%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           LE   T    +G   +  T+ T++D L R ++      +L +M+       E  F  LM+
Sbjct: 180 LESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLME 239

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHLR 197
            F      E  L +  ++  +          S  +N+LI    ++    + L Y  Q + 
Sbjct: 240 GFVEEGSIEAALRLKARMSEM-----GCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIA 294

Query: 198 --LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              +P+   F+  +   C+ G ++ A +VL  M + +   P++ TYST+I+ LC NG   
Sbjct: 295 DGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQ-EGCEPDVYTYSTVINCLCNNGELE 353

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA  +  +MV     LPD  T+N LI   C   +++ A  +   +   G +PNV+ +  L
Sbjct: 354 EAKGIVNQMVDSG-CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNIL 412

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N  CK G    A  +F+EMK+    PD + Y  LI+  C +G++ +AL+LLKEM+  GC
Sbjct: 413 INALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGC 472

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
               VT+N I+ GLC+  +IEEA  + +++   GI  N  ++  +++  C    ++ A E
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAE 532

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+  M+  G  P+  T N +L   CK G    AA  L  +   GF+ +  ++A L+  +C
Sbjct: 533 LVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592

Query: 496 RGRKLLFAFELLDELVIK 513
           + R+   A +LL  + +K
Sbjct: 593 KARRTQAALKLLRGMRMK 610



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 193/352 (54%), Gaps = 8/352 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLES 220
           +P +   ST +N L  + +++ A+  +   NQ +     P+T  FN LI   C    LE 
Sbjct: 333 EPDVYTYSTVINCLCNNGELEEAKGIV---NQMVDSGCLPDTTTFNTLIVALCTENQLEE 389

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A ++ +E+    +S PN+ T++ LI+ LCK G    A+ LFEEM S     PD +TYN+L
Sbjct: 390 ALDLARELTVKGLS-PNVYTFNILINALCKVGDPHLAVRLFEEMKSSG-CTPDEVTYNIL 447

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           ID  C  GK+ +A  +++ M+ +GC  +   Y T+++G CK  +++EA+EVFD+M    +
Sbjct: 448 IDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGI 507

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
             + I + TLI+  C A R+D+A EL+ +M   G + + VT+N IL   C++G I +A  
Sbjct: 508 GRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAAD 567

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +L+ +  +G  ++  +Y  ++N  C+    + A++LLR M  +G  P     N ++  L 
Sbjct: 568 ILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLF 627

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF-AFELLDELV 511
           +     DA      + E+G  P++ ++ ++   +CRG   +  AF+ L E+ 
Sbjct: 628 RGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMA 679



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 251/508 (49%), Gaps = 18/508 (3%)

Query: 20  SSSSLP-WISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAA-------ISLIKC 71
           +SSS P   SPL  + A    A  P          ++R+RF    AA       ++ ++ 
Sbjct: 8   ASSSYPRAASPLPQVTACPSNAGLPAAARGPW--WQRRARFQLKFAAGSEQERLVTALRE 65

Query: 72  EKEPQCALEIFNT-VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           + +P+ AL + N+ ++   G   +   Y  I+ KL     F+ +  ++ +M  E  +   
Sbjct: 66  QADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGL 125

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FL 189
           G+  + +  ++   L +   ++      +   + + +  +  L +L E +++ L ++ + 
Sbjct: 126 GLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYT 185

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           + S+Q +  +P+   FN +I   C+     +A  +L+EM    ++ P+  T++TL++G  
Sbjct: 186 EMSSQGI--EPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVA-PDETTFTTLMEGFV 242

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           + G    A+ L   M S+    P ++T NVLI+G+C+ G+V  A   ++    +G  P+ 
Sbjct: 243 EEGSIEAALRLKARM-SEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDR 301

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             ++T +NG C+ G +  A +V   M     +PD   Y+T+INC C  G ++EA  ++ +
Sbjct: 302 VTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQ 361

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M + GC  D  TFN ++  LC E ++EEAL +  +L   G+  N  ++ I++N  C+ G+
Sbjct: 362 MVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGD 421

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD-SWA 488
              A+ L   M   G  P   T N L+  LC +G     A+ L   +E+   P+S  ++ 
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAK-ALDLLKEMEVSGCPQSTVTYN 480

Query: 489 LLVELICRGRKLLFAFELLDELVIKESG 516
            +++ +C+ R++  A E+ D++ +   G
Sbjct: 481 TIIDGLCKRRRIEEAEEVFDQMDVTGIG 508



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 198/403 (49%), Gaps = 5/403 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY+T+++ L    + E    ++ QM    C      F  L+      +  E
Sbjct: 329 QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLE 388

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             L++  ++  +    P++   +  +N L +     LA    +   +     P+   +NI
Sbjct: 389 EALDLARELT-VKGLSPNVYTFNILINALCKVGDPHLAVRLFE-EMKSSGCTPDEVTYNI 446

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI + C  G L  A ++LKEM+ S     + +TY+T+IDGLCK  R  EA E+F++M   
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQ-STVTYNTIIDGLCKRRRIEEAEEVFDQM-DV 504

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I  +A+T+N LIDG C   ++D A ++++ M + G  PN   Y +++  +CK+G + +
Sbjct: 505 TGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISK 564

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++   M     + D + Y TLIN  C+A R   AL+LL+ M+ +G K     +N ++ 
Sbjct: 565 AADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQ 624

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG-ELEKAIELLRLMLCRGFL 446
            L R     +AL +  ++   G   +  +Y+IV    C+ G  +++A + L  M   GF+
Sbjct: 625 SLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFI 684

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           P +++   L   L   GM +    A+  +VE     ESD  A+
Sbjct: 685 PEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKANFRESDISAI 727


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 228/470 (48%), Gaps = 46/470 (9%)

Query: 64  AAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV--------D 115
            AI       +P  A +IF  +   +    N  T  T+L+ L RY    +V        D
Sbjct: 140 TAIGAYVQSGQPHHAFQIFKKMKRLR-LRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198

Query: 116 AV----------LRQMTYETC---KFHEGI-FLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           A+             + Y  C   KF + + FLN+M  + NCS                 
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY-NCS----------------- 240

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
             P     +T L+ L +  ++  A++ L    +   L PN   +NIL+  +CK G L+ A
Sbjct: 241 --PDNVTYNTILDTLCKKGRLGDARDLL-MDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             V++ M ++ +  P++ TY+ LI+GLC  GR  EA +L +EM +  ++LPD ++YN LI
Sbjct: 298 ANVIELMTQNNL-LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL-KLLPDVVSYNTLI 355

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           +G     K+  A K++E M   G  PN   +  ++  +CKEGK+ +A     +M+     
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + Y TLIN +C+AG + EA   + EM  +  K D VT N IL  LCRE K+EEA  +
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L      G ++++ SY  ++    + G +++A++L   M  +  +P   T N ++  LC+
Sbjct: 476 LSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQ 535

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G  E A   L  L+E G  P+  ++  ++   CR   +  AF+  +++V
Sbjct: 536 CGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 190/367 (51%), Gaps = 38/367 (10%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A N ++   Q+  L P+   +N+LI   C  G +E AF++  EM+  ++  P++++Y+TL
Sbjct: 297 AANVIELMTQN-NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKL-LPDVVSYNTL 354

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           I+G  +  +  EA +L EEM S+  + P+A+T+N+++  +C+ GK+D A   +  M+ +G
Sbjct: 355 INGCLEWSKISEAFKLLEEM-SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA------- 357
            +P+   Y TL+NG+CK G + EA    DEM    +K D++   T++   CR        
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 358 ----------------------------GRVDEALELLKEMKERGCKADIVTFNIILGGL 389
                                       G VD AL+L  EMKE+      VT+N I+GGL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+ GK E+A+  L +L   G+  ++ +Y  +L+  C++G++EKA +    M+   F P  
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T N LL  LC  G+ E A       V  G   ++ ++  L+  +C+  +L  AF LL E
Sbjct: 594 FTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653

Query: 510 LVIKESG 516
           +  KE G
Sbjct: 654 MEEKELG 660



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 189/357 (52%), Gaps = 3/357 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P + + +T +N  +E +++  A   L+  ++   +KPN    NI++K +CK G ++ A  
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEK-GVKPNAVTHNIMVKWYCKEGKMDDASN 404

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            + +M++S  S P+ +TY+TLI+G CK G   EA    +EM  K+  + D++T N ++  
Sbjct: 405 TITKMEESGFS-PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM-DSVTLNTILRT 462

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            CR  K++ A K++   +  G   +  +Y TL+ G+ K+G +  A +++DEMK   + P 
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ Y  +I   C+ G+ ++A+  L E+ E G   D  T+N IL G CREG +E+A     
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+  +    +  +  I+L   C +G LEKA++L    + +G      T N L+  LCK G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
             +DA   L  + E    P+  ++  ++  +    ++  A E + +++ K +   QV
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 170/350 (48%), Gaps = 39/350 (11%)

Query: 196 LRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-------------------- 234
           LRL  P+  + +  I  + + G    AF++ K+MK+ ++                     
Sbjct: 128 LRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSH 187

Query: 235 -----------------YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
                             PN+ T++ +I G C   +F++A+E F  ++ K    PD +TY
Sbjct: 188 SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVE-FLNVMGKYNCSPDNVTY 246

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N ++D  C+ G++  A+ ++  MK+ G  PN   Y  L+ G+CK G L+EA  V + M  
Sbjct: 247 NTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             L PD   Y  LIN  C  GR++EA +L  EM+      D+V++N ++ G     KI E
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +LE++   G+  N  ++ I++ + C++G+++ A   +  M   GF P   T N L+ 
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             CKAG   +A   +  +     K +S +   ++  +CR +KL  A++LL
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 25/241 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  +N +I   C+ G  E A   L E+ +S +  P+  TY+T++ G C+ G   +A +
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL-LPDETTYNTILHGYCREGDVEKAFQ 579

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              +MV ++   PD  T N+L+ G C  G +++A K+     + G   +   Y TL+   
Sbjct: 580 FHNKMV-ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD- 378
           CKEG+L +A  +  EM+   L PD   Y  +I     +GR+ EA E + +M E+G   D 
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQ 698

Query: 379 ----------------------IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
                                  V ++  +  LC EGK ++A+ +  +    GI ++K++
Sbjct: 699 VLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758

Query: 417 Y 417
           Y
Sbjct: 759 Y 759



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 73/312 (23%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN-------------- 317
           P     +  I  + + G+   A +I + MK     PN+    TL+N              
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 318 ------------------------GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
                                   G+C E K ++A E  + M  +   PD + Y T+++ 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 354 FCRAGRVDEALELLKEMKERG---------------CK--------------------AD 378
            C+ GR+ +A +LL +MK RG               CK                     D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + T+N+++ GLC EG+IEEA  + +++    +  +  SY  ++N   +  ++ +A +LL 
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  +G  P+  T N ++   CK G  +DA+  +  + E GF P+  ++  L+   C+  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 499 KLLFAFELLDEL 510
            +  AF  +DE+
Sbjct: 433 NMGEAFRTMDEM 444


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 206/402 (51%), Gaps = 45/402 (11%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHLRLKPNTCIFN 206
           RV+E+       T   P + + +  ++   ++NQ+D A Q F +  ++     P+   +N
Sbjct: 118 RVMEILE-----TYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGF--SPDVVTYN 170

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           I+I   C RG LE AFEV+ E+ K     P++ITY+ LI+     GR  EA+ELF+E+VS
Sbjct: 171 IMIGSLCSRGKLELAFEVMDELLKDGCK-PSVITYTILIEATILEGRINEALELFDELVS 229

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRA--------------------------------- 293
           +  + PD  TYN +I G C+ G  DRA                                 
Sbjct: 230 RG-LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWE 288

Query: 294 --KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
             +++M+ M  +GC PNV  ++ L++ FC+EG+++EA  V + MK   L PD+  Y  LI
Sbjct: 289 DGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLI 348

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           + FC+ GR+D A+E L++M   GC  DIV +N IL  LC+ G  + AL + EKL   G  
Sbjct: 349 SAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCP 408

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
               +Y  + +     G   KA+E++  M+ +G  P   T N L+  LC+ G+ ++A   
Sbjct: 409 PTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGL 468

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L  +    F+P   S+ +++  +C+  ++    ELL  +V K
Sbjct: 469 LVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEK 510



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 205/412 (49%), Gaps = 13/412 (3%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           S+ A IS      +   A ++F+ +   +GF+ +  TY  ++  L    K E    V+ +
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRM-RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIES 179
           +  + CK     +  L++           LE+F ++  ++R  +P L   +  +  + + 
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDEL--VSRGLRPDLYTYNAIIRGICKE 249

Query: 180 NQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
              D A +F++    HL  +   P+   +NIL++    +   E    ++K+M  S    P
Sbjct: 250 GMEDRALDFVR----HLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCE-P 304

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N++T+S LI   C+ GR REA+ + E M  K  + PD+ +Y+ LI  FC+ G++D A + 
Sbjct: 305 NVVTHSILISSFCREGRVREAVNVLEVMKEKG-LTPDSYSYDPLISAFCKEGRLDLAIEY 363

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +E M ++GC P++ NY T++   CK G    A +VF+++      P    Y T+ +    
Sbjct: 364 LEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G   +ALE++ EM  +G   D +T+N ++  LCR+G ++EA+G+L  +          S
Sbjct: 424 CGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVIS 483

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           + IVL   C+   + + IELL  M+ +G LP+  +   L+  +  AG   +A
Sbjct: 484 FNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 170/351 (48%), Gaps = 38/351 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+  +   LIK       L+ A  V++ ++      P++ +Y+ +I G  K  +   A
Sbjct: 93  FKPDVVLCTKLIKGFFNSRNLKKAMRVMEILE--TYGDPDVYSYNAMISGFSKANQIDSA 150

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F+ M S+    PD +TYN++I   C  GK++ A ++M+ +  +GC P+V  YT L+ 
Sbjct: 151 NQVFDRMRSRG-FSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIE 209

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
               EG++ EA E+FDE+ +  L+PD   Y  +I   C+ G  D AL+ ++ +  RGC  
Sbjct: 210 ATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNP 269

Query: 378 DIVTFNIIL-----------------------------------GGLCREGKIEEALGML 402
           D+V++NI+L                                      CREG++ EA+ +L
Sbjct: 270 DVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVL 329

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           E +   G+  +  SY  +++  C++G L+ AIE L  M+  G LP     N +L  LCK 
Sbjct: 330 EVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKF 389

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           G A+ A      L E+G  P   ++  +   +      + A E++ E++ K
Sbjct: 390 GCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRK 440



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 3/304 (0%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C+ G    +   L+ +  S+   P+++  + LI G   +   ++A+ + E + + 
Sbjct: 68  LLNRSCRAGKHNESLYFLESVV-SKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETY 126

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               PD  +YN +I GF +  ++D A ++ + M++ G +P+V  Y  ++   C  GKL+ 
Sbjct: 127 GD--PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLEL 184

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A EV DE+     KP  I YT LI      GR++EALEL  E+  RG + D+ T+N I+ 
Sbjct: 185 AFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIR 244

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C+EG  + AL  +  L   G   +  SY I+L     K   E    L++ M+  G  P
Sbjct: 245 GICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP 304

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T + L+   C+ G   +A   L  + E G  P+S S+  L+   C+  +L  A E L
Sbjct: 305 NVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYL 364

Query: 508 DELV 511
           +++V
Sbjct: 365 EKMV 368


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 229/479 (47%), Gaps = 54/479 (11%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL---RQMTYE 124
           +++  K P  AL+ FN   E  GF HN+ +Y  +L+ L R +        L   ++ +  
Sbjct: 92  VLRLIKTPSKALQFFNWAPEL-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNG 150

Query: 125 TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
           T K  +  F +L++ +    L +  +++F+ +  +    PS+   ++ L +L++  + ++
Sbjct: 151 TVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVG-VSPSVVTFNSLLLILLKRGRTNM 209

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           AQ+          + P+T  FNILI+  CK   ++  F   KEM + +   P+L+TY+TL
Sbjct: 210 AQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCD-PDLVTYNTL 268

Query: 245 IDGLCKNGRFR-------------------------------------EAIELFEEMVSK 267
           +DGLC+ G+                                       EA+ +FEEMVSK
Sbjct: 269 VDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSK 328

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIME-FMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
             + P+ +TYN LI G C   K+D+ K+I E  +   G  P+     TLMN  C  G L 
Sbjct: 329 G-LKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLN 387

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-------GCKADI 379
           +A EVF++M    ++PD+  Y+ LI   C+ G  + A +L  E+ E+       GC   +
Sbjct: 388 DALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLV 447

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +  +   LCR GK  +A  +  +L   G   +  S++I++   C++G  E   ELL L
Sbjct: 448 AAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVL 506

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW-ALLVELICRG 497
           ML R F+P   T   L+  L + G    A   L  +++    PE+ ++ ++L  L+ +G
Sbjct: 507 MLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKG 565



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 183/354 (51%), Gaps = 19/354 (5%)

Query: 173 LNLLIESNQVDLAQNFL----KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           L +L  +  +++A+NFL    + SN  ++L+     FN LI+ + K G  + + +V   M
Sbjct: 125 LEILGRARNLNVARNFLFSIKRRSNGTVKLEDR--FFNSLIRSYGKAGLFQESVQVFNSM 182

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K   +S P+++T+++L+  L K GR   A  +F+EM+S   + PD  T+N+LI GFC+  
Sbjct: 183 KSVGVS-PSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNS 241

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIG 346
            VD   +  + M    C+P++  Y TL++G C+ GK+  A  V + M  K+  L PD + 
Sbjct: 242 MVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVT 301

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE-KL 405
           YTTL+  +C    +DEAL + +EM  +G K + +T+N ++ GLC   KI++   + E  L
Sbjct: 302 YTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGAL 361

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G   +  +   ++N  C  G L  A+E+   M+     P  AT + L+  LC+ G  
Sbjct: 362 GGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNF 421

Query: 466 EDAAIALFG--------LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           E A   LF         L + G  P   ++  + E +CR  K   A  +  +L+
Sbjct: 422 ERAE-QLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLM 474



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 145/278 (52%), Gaps = 5/278 (1%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EF 299
           +++LI    K G F+E++++F  M S   + P  +T+N L+    + G+ + A+ +  E 
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVG-VSPSVVTFNSLLLILLKRGRTNMAQSVFDEM 217

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +   G  P+ + +  L+ GFCK   + E    F EM  F   PD + Y TL++  CRAG+
Sbjct: 218 LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277

Query: 360 VDEALELLKEM--KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           V+ A  ++  M  K      D+VT+  ++ G C + +I+EAL + E++   G+  N+ +Y
Sbjct: 278 VNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITY 337

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRG-FLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
             ++   C+  +++K  ++    L  G F+P   T N L+   C AG   DA      ++
Sbjct: 338 NTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM 397

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            +  +P+S ++++L+  +C+      A +L DEL  KE
Sbjct: 398 VLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKE 435



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 137/329 (41%), Gaps = 50/329 (15%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSLHE--RVLE 151
            TY T++D L R  K      V+  M  ++   +  +  +  L++ +  C  HE    L 
Sbjct: 263 VTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGY--CMKHEIDEALV 320

Query: 152 MFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
           +F ++  +++  KP+    +T +  L E  ++D  +   + +       P+TC  N L+ 
Sbjct: 321 VFEEM--VSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMN 378

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            HC  G L  A EV ++M    +  P+  TYS LI  LC+ G F  A +LF+E+  K+ +
Sbjct: 379 AHCNAGNLNDALEVFEKMMVLNVR-PDSATYSVLIRNLCQRGNFERAEQLFDELSEKEIL 437

Query: 271 L----------------------------------------PDALTYNVLIDGFCRGGKV 290
           L                                         D L++ +LI G CR G  
Sbjct: 438 LRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTF 497

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           +   +++  M      P++  Y +L++G  ++G+   A +  ++M      P+T  + ++
Sbjct: 498 EAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSI 557

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADI 379
           +      G   E+   +  M E   + +I
Sbjct: 558 LARLLAKGCAHESARFIMLMLEGKIRQNI 586


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 243/490 (49%), Gaps = 50/490 (10%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H AA+  I+ + +P  AL++FN V  + GF H   TY  +++KL  + KFEA++ VL +M
Sbjct: 9   HVAAV--IRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM 66

Query: 122 TYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
                 K  EG+++ +M+ +      +  + +F ++     E PS+++ +  +N+L+E  
Sbjct: 67  RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCE-PSVQSYNAIMNILVEYG 125

Query: 181 QVDLAQNFLKYSNQHLRLK-----PNTCIFNILIKHHCKRGTLESAFEVLKEMKK----- 230
               A         ++R+K     P+     I +K  C  G   +A  +L  M       
Sbjct: 126 YFSQAHKV------YMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF 179

Query: 231 SQMSY-----------------------------PNLITYSTLIDGLCKNGRFREAIELF 261
           + +SY                             P+++T++ LI  LCK G  +E+ +LF
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            + V K  + P+  T+N+ I G CR G +D A +++E + + G  P+V +Y TL+ GFCK
Sbjct: 240 SK-VMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             KL EA+    +M N  ++P+   Y T+IN FC+AG +  A ++L++   +G   D  T
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ ++ GLC +G +  A+ +  +    G   +   Y  ++    ++G + +A++L++ M+
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P   T N ++  LCK G   DA   L   +  G  P+  ++  L++  C+ R + 
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478

Query: 502 FAFELLDELV 511
            A E+LD ++
Sbjct: 479 KAIEILDTML 488



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 225/460 (48%), Gaps = 29/460 (6%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILD---------KLARYKKF------EAVD 115
           CE   Q    I N + E   F+  +  Y  + D            R K F       A  
Sbjct: 107 CEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAAL 166

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHF--SNCSLHERVLEMFHKIHPITREK--PSLKAIST 171
            +L  M  + C+F+   +  ++  F   NC +     E +H    + ++   P +   + 
Sbjct: 167 RLLNNMPGQGCEFNAVSYCAVISGFYKENCQI-----EAYHLFDEMLKQGICPDILTFNK 221

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
            +++L +   V  ++    +S    R + PN   FNI I+  C++G ++ A  +L+ +  
Sbjct: 222 LIHVLCKKGNVQESEKL--FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVS 279

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             ++ P++I+Y+TLI G CK+ +  EA     +MV+   + P+  TYN +I+GFC+ G +
Sbjct: 280 EGLT-PDVISYNTLICGFCKHSKLVEAECYLHKMVNSG-VEPNEFTYNTIINGFCKAGMM 337

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
             A KI+      G  P+ F Y++L+NG C +G +  A  VF E      K   I Y TL
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTL 397

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +    + G V +AL+L+K+M E GC  DI T+N+++ GLC+ G + +A G+L      G 
Sbjct: 398 VKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGC 457

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  ++  +++  C++  ++KAIE+L  ML  G  P   T N LL  LCKA   ++   
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
               ++E G  P   ++ +L+E  C+ RK+  A EL  E+
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 188/395 (47%), Gaps = 5/395 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY TI++   +    +  D +LR   ++     E  + +L+    N     R 
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           + +F++       K S+   +T +  L +   V  A   +K   +H    P+   +N+++
Sbjct: 376 MAVFYEAME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH-GCSPDIWTYNLVV 433

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G L  A  +L +   ++   P++ T++TLIDG CK     +AIE+ + M+S   
Sbjct: 434 NGLCKMGCLSDANGILND-AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG- 491

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I PD +TYN L++G C+  K+D      + M   GC PN+  Y  L+  FCK+ K+ EA 
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERGCKADIVTFNIILGG 388
           E+F EMK   L PD +   TLI   C  G +D+A EL   + KE         FNI++  
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C +  +  A  +  K+       +  +YR++++  C+ G ++ A   L   + +G +P 
Sbjct: 612 FCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           + T  ++L  LC      +A + +  +V+ G  PE
Sbjct: 672 FTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 200/430 (46%), Gaps = 17/430 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  +Y T++    ++ K    +  L +M     + +E  +  ++  F        
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG---- 335

Query: 149 VLEMFHKIHPITREK------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
              M      I R+       P     S+ +N L     ++ A     Y       K + 
Sbjct: 336 ---MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF-YEAMEKGFKHSI 391

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
            ++N L+K   K+G +  A +++K+M +   S P++ TY+ +++GLCK G   +A  +  
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS-PDIWTYNLVVNGLCKMGCLSDANGILN 450

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           + ++K  I PD  T+N LIDG+C+   +D+A +I++ M ++G  P+V  Y TL+NG CK 
Sbjct: 451 DAIAKGCI-PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            KL    + F  M      P+ I Y  LI  FC+  +V EA+EL KEMK RG   DIVT 
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL 569

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIY-LNKASYRIVLNFSCQKGELEKAIELLRLML 441
             ++ GLC  G++++A  +   +  +  +  + A + I++N  C K  +  A +L   M 
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMG 629

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
                P   T   ++   CK G  + A   L   +  G  P   +   ++  +C   +L 
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689

Query: 502 FAFELLDELV 511
            A  +++ +V
Sbjct: 690 EAVVIINLMV 699



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 8/299 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++   + E  G + +  TY  +++ L +       + +L     + C      F  L+
Sbjct: 410 ALQLMKDMMEH-GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             +      ++ +E+   +  H IT   P +   +T LN L ++ ++D   +  K +   
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGIT---PDVITYNTLLNGLCKARKLDNVVDTFK-AMLE 524

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               PN   +NILI+  CK   +  A E+ KEMK   ++ P+++T  TLI GLC NG   
Sbjct: 525 KGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT-PDIVTLCTLICGLCSNGELD 583

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A ELF  +  + +       +N++I+ FC    V  A+K+   M  + C P+ + Y  +
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ +CK G +  A     E  +  L P       ++NC C   R+ EA+ ++  M + G
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 248/521 (47%), Gaps = 70/521 (13%)

Query: 6   FSLR---KCCRFSSFSTSSSSLPWIS-----PLEVIKANTPKADPPVE-TSDTCVDARKR 56
           FSLR   +    SS    SS LP  S     P  V K +T  + P  E +S+ C  + K 
Sbjct: 17  FSLRGSHQSFNLSSEPHPSSPLPISSTTNPFPELVSKISTILSSPKWEHSSELCHLSPK- 75

Query: 57  SRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA 116
              +     +++++  K     L  F  +S +K F H+ + + ++L++L R + F   D 
Sbjct: 76  ---LKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADH 132

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           V R +  ++C+ +EG               +RV +   +I+       +L + +T L  L
Sbjct: 133 V-RILMIKSCR-NEGEV-------------KRVTQFLSEINSKYDFGYTLCSFTTLLIQL 177

Query: 177 IESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
            + + VDLA++ ++K  N  +R                                      
Sbjct: 178 GKFDMVDLARDMYIKMLNSGIR-------------------------------------- 199

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+L+T++T+I+ LCK GR +EA  +   +   D   P+A TY  LI G CR   +D A  
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA-YPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M  +GC+PN   Y+TL+NG C EG+L+EA ++ +EM    ++P    YT  +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
            AG   EA+ELL +MK+RGC  +I TF  ++ GL R+GK E A+G+  K+  DG+     
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  ++N  C +G  E A  + + ML  G LP   T NE++   C  G  + A +    +
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           ++ G  P   ++  L+   C+   L  A  LL+  ++K +G
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE--IMKGNG 477



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 207/417 (49%), Gaps = 13/417 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G + N+ TY+T+++ L    + E    +L +M  +  +     +   +    +     
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 148 RVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
             +E+  K+    +++   P+++  +  ++ L    + ++A   L +      L P T  
Sbjct: 325 EAVELLGKM----KKRGCVPNIQTFTALISGLSRDGKFEIAIG-LYHKMLADGLVPTTVT 379

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   C  G  E+AF + K M  S  S P+  TY+ +I   C  G  ++A+ +F++M
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWML-SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K    P+ +TYN LI G+C+ G ++ A +++E MK NG  P+ + YT L++GF + GK
Sbjct: 439 L-KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+ A  +F  M    + P+ + YT +I+ +    +VD+AL L  +M E G      T+N+
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G  +   I EA     K+   G+  N  +Y   ++  C+ G    A ++   M  R 
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIA--LFGLVEMGFKPESDSWALLVELIC-RGR 498
           + P+  T + L+  LC+ G AEDA +   L  L   G +P  D++  LV+ +C  GR
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 176/347 (50%), Gaps = 3/347 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    ST +N L    +++ A + L+   Q   ++P    + I +   C  G    A E
Sbjct: 270 PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAGCSSEAVE 328

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L +MKK +   PN+ T++ LI GL ++G+F  AI L+ +M++ D ++P  +TYN LI+ 
Sbjct: 329 LLGKMKK-RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA-DGLVPTTVTYNALINQ 386

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C  G+ + A  I ++M ++G  P+   Y  ++  FC  G +Q+A  +FD+M      P+
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y TLI  +C+ G ++ A+ LL+ MK  G K D  T+  ++ G  R GK+E A  +  
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   GI  N  +Y  +++      +++ A+ L   M+  G LP   T N ++    K  
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTN 566

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +A      +V+ G  P   ++   ++ +CR  +   AF++  E+
Sbjct: 567 SISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 197/446 (44%), Gaps = 41/446 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QKG      TY   L  L           +L +M    C  +   F  L+   S     E
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             + ++HK+       P+    +  +N L    + + A    K+   H  L P+T  +N 
Sbjct: 360 IAIGLYHKMLA-DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL-PSTQTYNE 417

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +IK  C  G ++ A  +  +M K+  S PN+ITY+TLI G CK G    A+ L E M   
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSS-PNVITYNTLIYGYCKQGNLNNAMRLLEIM-KG 475

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + PDA TY  LI GF RGGK++ A  +   M  +G +PN   YT +++G+    K+ +
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535

Query: 328 AKEVF----------------------------DEMKNFL-------LKPDTIGYTTLIN 352
           A  +F                             E +NF        L P+ I YT+ I+
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFID 595

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA--LGMLEKLWYDGI 410
             CR GR   A ++  EM++R    ++ T++ ++ GLC+EG+ E+A    +L +L + G 
Sbjct: 596 GLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC 655

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N  +Y  ++   C +G   +A +L+  M  +G  P       LL+  CK    E A  
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALN 715

Query: 471 ALFGLVEMGFKPESDSWALLVELICR 496
             + +  +GF+     +  L+  +C+
Sbjct: 716 IFYSMDTLGFQLHLSDYKALICALCK 741



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 189/405 (46%), Gaps = 6/405 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G      TY  ++++L    +FE    + + M           +  ++K F      ++ 
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           + +F K+       P++   +T +    +   ++ A   L+    +  LKP+   +  LI
Sbjct: 432 MVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN-GLKPDAWTYTELI 489

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
               + G LE A  +   M +  +S PN +TY+ +IDG     +  +A+ LF +MV    
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGIS-PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            LP + TYNV+I GF +   +  A+     M   G  PNV  YT+ ++G C+ G+   A 
Sbjct: 549 -LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA--LELLKEMKERGCKADIVTFNIILG 387
           ++F EM+     P+   Y++LI   C+ GR ++A    LL  +   GC+ ++ T+  ++ 
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC EG+  EA  ++  +   G+  ++  YR +L   C+  ++E A+ +   M   GF  
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           H +    L+  LCK    E+A      ++E  +  +  +W +L++
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLD 772



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 207/447 (46%), Gaps = 40/447 (8%)

Query: 50  CVDARKRSRF------ISHGAAIS------LIKC---EKEPQCALEIFNTVSEQKGFNHN 94
           CV+ R  + F      +SHG+  S      +IKC     + Q A+ IF+ +  + G + N
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML-KAGSSPN 446

Query: 95  NATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
             TY T++    +         +L  M     K     +  L+  FS     E    +F+
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506

Query: 155 KI--HPITREKPSLKAI-STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
            +  H I+    +  AI     NL    + + L    ++  N      P++  +N++I  
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL-----PSSQTYNVMISG 561

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
             K  ++  A     +M K Q   PN+ITY++ IDGLC+NGR   A ++F EM  K    
Sbjct: 562 FSKTNSISEAENFCGKMVK-QGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM-EKRNYF 619

Query: 272 PDALTYNVLIDGFCRGGKVDRAK--KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           P+  TY+ LI G C+ G+ + A+   ++  + + GC PNV  YTTL+ G C EG+  EA 
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++   M+   L+P    Y  L+   C+  +V+ AL +   M   G +  +  +  ++  L
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739

Query: 390 CREGKIEEA----LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           C+E  IEEA      MLEK W      ++ ++ ++L+   ++GE +  ++LL +M  R  
Sbjct: 740 CKENFIEEAQCIFQTMLEKHWNS----DEVAWTVLLDGLLKEGETDLCLKLLHVMESRNC 795

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIAL 472
             ++ T     V L +   A D AI +
Sbjct: 796 TLNFQT----YVMLARELSALDCAIKI 818


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 248/521 (47%), Gaps = 70/521 (13%)

Query: 6   FSLR---KCCRFSSFSTSSSSLPWIS-----PLEVIKANTPKADPPVE-TSDTCVDARKR 56
           FSLR   +    SS    SS LP  S     P  V K +T  + P  E +S+ C  + K 
Sbjct: 17  FSLRGSHQSFNLSSEPHPSSPLPISSTTNPFPELVSKISTILSSPKWEHSSELCHLSPK- 75

Query: 57  SRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA 116
              +     +++++  K     L  F  +S +K F H+ + + ++L++L R + F   D 
Sbjct: 76  ---LKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADH 132

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           V R +  ++C+ +EG               +RV +   +I+       +L + +T L  L
Sbjct: 133 V-RILMIKSCR-NEGEV-------------KRVTQFLSEINSKYDFGYTLCSFTTLLIQL 177

Query: 177 IESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
            + + VDLA++ ++K  N  +R                                      
Sbjct: 178 GKFDMVDLARDMYIKMLNSGIR-------------------------------------- 199

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+L+T++T+I+ LCK GR +EA  +   +   D   P+A TY  LI G CR   +D A  
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA-YPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M  +GC+PN   Y+TL+NG C EG+L+EA ++ +EM    ++P    YT  +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
            AG   EA+ELL +MK+RGC  +I TF  ++ GL R+GK E A+G+  K+  DG+     
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  ++N  C +G  E A  + + ML  G LP   T NE++   C  G  + A +    +
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           ++ G  P   ++  L+   C+   L  A  LL+  ++K +G
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE--IMKGNG 477



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 207/417 (49%), Gaps = 13/417 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G + N+ TY+T+++ L    + E    +L +M  +  +     +   +    +     
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 148 RVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
             +E+  K+    +++   P+++  +  ++ L    + ++A   L +      L P T  
Sbjct: 325 EAVELLGKM----KKRGCVPNIQTFTALISGLSRDGKFEIAIG-LYHKMLADGLVPTTVT 379

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   C  G  E+AF + K M  S  S P+  TY+ +I   C  G  ++A+ +F++M
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWML-SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K    P+ +TYN LI G+C+ G ++ A +++E MK NG  P+ + YT L++GF + GK
Sbjct: 439 L-KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+ A  +F  M    + P+ + YT +I+ +    +VD+AL L  +M E G      T+N+
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G  +   I EA     K+   G+  N  +Y   ++  C+ G    A ++   M  R 
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIA--LFGLVEMGFKPESDSWALLVELIC-RGR 498
           + P+  T + L+  LC+ G AEDA +   L  L   G +P  D++  LV+ +C  GR
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 176/347 (50%), Gaps = 3/347 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    ST +N L    +++ A + L+   Q   ++P    + I +   C  G    A E
Sbjct: 270 PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAGCSSEAVE 328

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L +MKK +   PN+ T++ LI GL ++G+F  AI L+ +M++ D ++P  +TYN LI+ 
Sbjct: 329 LLGKMKK-RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA-DGLVPTTVTYNALINQ 386

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C  G+ + A  I ++M ++G  P+   Y  ++  FC  G +Q+A  +FD+M      P+
Sbjct: 387 LCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y TLI  +C+ G ++ A+ LL+ MK  G K D  T+  ++ G  R GK+E A  +  
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   GI  N  +Y  +++      +++ A+ L   M+  G LP   T N ++    K  
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTN 566

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +A      +V+ G  P   ++   ++ +CR  +   AF++  E+
Sbjct: 567 SISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 197/446 (44%), Gaps = 41/446 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QKG      TY   L  L           +L +M    C  +   F  L+   S     E
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             + ++HK+       P+    +  +N L    + + A    K+   H  L P+T  +N 
Sbjct: 360 IAIGLYHKMLA-DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL-PSTQTYNE 417

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +IK  C  G ++ A  +  +M K+  S PN+ITY+TLI G CK G    A+ L E M   
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSS-PNVITYNTLIYGYCKQGNLNNAMRLLEIM-KG 475

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + PDA TY  LI GF RGGK++ A  +   M  +G +PN   YT +++G+    K+ +
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535

Query: 328 AKEVF----------------------------DEMKNFL-------LKPDTIGYTTLIN 352
           A  +F                             E +NF        L P+ I YT+ I+
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFID 595

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA--LGMLEKLWYDGI 410
             CR GR   A ++  EM++R    ++ T++ ++ GLC+EG+ E+A    +L +L + G 
Sbjct: 596 GLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC 655

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N  +Y  ++   C +G   +A +L+  M  +G  P       LL+  CK    E A  
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALN 715

Query: 471 ALFGLVEMGFKPESDSWALLVELICR 496
             + +  +GF+     +  L+  +C+
Sbjct: 716 IFYSMDTLGFQLHLSDYKALICALCK 741



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 188/405 (46%), Gaps = 6/405 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G      TY  ++++L    +FE    + + M           +  ++K F      ++ 
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           + +F K+       P++   +T +    +   ++ A   L+    +  LKP+   +  LI
Sbjct: 432 MVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN-GLKPDAWTYTELI 489

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
               + G LE A  +   M +  +S PN +TY+ +IDG     +  +A+ LF +MV    
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGIS-PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            LP + TYNV+I GF +   +  A+     M   G  PNV  YT+ ++G C+ G+   A 
Sbjct: 549 -LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA--LELLKEMKERGCKADIVTFNIILG 387
           ++F EM+     P+   Y++LI   C+ GR ++A    LL  +   GC+ ++ T+  ++ 
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC EG+  EA  ++  +   G+  ++  YR +L   C+  ++E A+ +   M   GF  
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           H +    L+  LCK    E+A      ++E  +  +   W +L++
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLD 772



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 206/447 (46%), Gaps = 40/447 (8%)

Query: 50  CVDARKRSRF------ISHGAAIS------LIKC---EKEPQCALEIFNTVSEQKGFNHN 94
           CV+ R  + F      +SHG+  S      +IKC     + Q A+ IF+ +  + G + N
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML-KAGSSPN 446

Query: 95  NATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
             TY T++    +         +L  M     K     +  L+  FS     E    +F+
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506

Query: 155 KI--HPITREKPSLKAI-STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
            +  H I+    +  AI     NL    + + L    ++  N      P++  +N++I  
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL-----PSSQTYNVMISG 561

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
             K  ++  A     +M K Q   PN+ITY++ IDGLC+NGR   A ++F EM  K    
Sbjct: 562 FSKTNSISEAENFCGKMVK-QGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM-EKRNYF 619

Query: 272 PDALTYNVLIDGFCRGGKVDRAK--KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           P+  TY+ LI G C+ G+ + A+   ++  + + GC PNV  YTTL+ G C EG+  EA 
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++   M+   L+P    Y  L+   C+  +V+ AL +   M   G +  +  +  ++  L
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739

Query: 390 CREGKIEEA----LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           C+E  IEEA      MLEK W      ++  + ++L+   ++GE +  ++LL +M  R  
Sbjct: 740 CKENFIEEAQCIFQTMLEKHWNS----DEVVWTVLLDGLLKEGETDLCLKLLHVMESRNC 795

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIAL 472
             ++ T     V L +   A D AI +
Sbjct: 796 TLNFQT----YVMLARELSALDCAIKI 818


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 243/512 (47%), Gaps = 79/512 (15%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT-YETCKFHEGIFLNL 136
           A ++F+ ++ + G   +  TY T++D L R  +    +A+L  M   +T  F+    +N 
Sbjct: 484 AFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFN--CCING 541

Query: 137 MKHFSNCS----LHERVLEM---------------------FHKIHPITRE------KPS 165
           +    + S    ++ R+LE+                     F +   +  E      +P 
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 601

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           +      ++ L ++ QV+ A++ L     +L + PN   +N L+   CK G +E A + L
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMG-NLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
           +EM  S    P+ ITY +L+  LC+  R  +A++L  E+ S     PD +TYN+L+DG  
Sbjct: 661 EEMVSSG-CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD-PDTVTYNILVDGLW 718

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK---P 342
           + G+ ++A  ++E M   G +P+V  Y TL++  CK G L+EA+ +  +M + + +   P
Sbjct: 719 KSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP 778

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA------------------------- 377
           + + Y+ LIN  C+ GR+DEA EL++EM  + C                           
Sbjct: 779 NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE 838

Query: 378 --------------DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
                         D VTF+ ++ GLC+ G+ +EA  + + +   G   N  +Y +++N 
Sbjct: 839 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNG 898

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+  ++E+A  ++  M+ +G  P   T + L+   CKA   ++A   L G+   G  P 
Sbjct: 899 LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKES 515
             ++  +++ +C+  +   AF++ D++ +K  
Sbjct: 959 VVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHG 990



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 224/478 (46%), Gaps = 76/478 (15%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALEIF     + G      TY TI++ L +  +  A                        
Sbjct: 199 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA------------------------ 234

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  L E ++E  H         P +   +T ++ L ++  ++ A+  L        
Sbjct: 235 ----GMELFEELVERGHH--------PDVVTYNTLIDSLCKAGDLEEARR-LHGDMSSRS 281

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFRE 256
             PN   +++LI   CK G ++ A E+++EM +KS    PN+ITY++ +DGLCK     E
Sbjct: 282 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 341

Query: 257 AIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           A EL   +     ++ PD +T++ LIDG C+ G++D A  + + M   G  PNV  Y  L
Sbjct: 342 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 401

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK  K++ A  + + M +  + PD I Y+ L++ FC+A RVDEALELL  M  RGC
Sbjct: 402 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 461

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWY-DGIYLNKASYRIVLN------------ 422
             ++VTFN I+ GLC+  +  EA  M + +    G+  +K +Y  +++            
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAE 521

Query: 423 -------------FSC------QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
                        F+C      + G++ +A+++   ML    +P   T N L+   CKAG
Sbjct: 522 ALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAG 581

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
             E A+     +V    +P+  ++  L++ +C+  ++  A ++LD +     G + VP
Sbjct: 582 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM-----GNLGVP 634



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 208/451 (46%), Gaps = 71/451 (15%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSLHERVLE 151
           N  TY+ +++ L +  + +    ++++MT ++C     I  + + +      S+     E
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +   +                                    +  LR+ P+T  F+ LI  
Sbjct: 345 LMRSLR-----------------------------------DGSLRVSPDTVTFSTLIDG 369

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CK G ++ A  V  +M       PN+ITY+ L++GLCK  +   A  + E MV K  + 
Sbjct: 370 LCKCGQIDEACSVFDDMIAGGY-VPNVITYNALVNGLCKADKMERAHAMIESMVDK-GVT 427

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD +TY+VL+D FC+  +VD A +++  M + GC PNV  + ++++G CK  +  EA ++
Sbjct: 428 PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQM 487

Query: 332 FDEMK-NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA------------- 377
           FD+M     L PD I Y TLI+   R GR  +A  LL  M +    A             
Sbjct: 488 FDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGD 547

Query: 378 ------------------DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
                             D VTFNI++ G C+ G  E+A  + E++    +  +  ++  
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G++E A ++L LM   G  P+  T N L+  LCK+G  E+A   L  +V  G
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
             P+S ++  LV  +CR  +   A +L+ EL
Sbjct: 668 CVPDSITYGSLVYALCRASRTDDALQLVSEL 698



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 180/316 (56%), Gaps = 7/316 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLK-EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +NI+++  C+ G    A E+ + EM +  ++ P ++TY+T+I+GLCK+      +ELFEE
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVA-PTIVTYNTIINGLCKSNELGAGMELFEE 241

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           +V +    PD +TYN LID  C+ G ++ A+++   M +  C PNV  Y+ L+NG CK G
Sbjct: 242 LVERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVG 300

Query: 324 KLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA--DI 379
           ++ EA+E+  EM  K+  + P+ I Y + ++  C+     EA EL++ +++   +   D 
Sbjct: 301 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 360

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTF+ ++ GLC+ G+I+EA  + + +   G   N  +Y  ++N  C+  ++E+A  ++  
Sbjct: 361 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 420

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P   T + L+   CKA   ++A   L G+   G  P   ++  +++ +C+  +
Sbjct: 421 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 480

Query: 500 LLFAFELLDELVIKES 515
              AF++ D++ +K  
Sbjct: 481 SGEAFQMFDDMALKHG 496



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 196/392 (50%), Gaps = 42/392 (10%)

Query: 151  EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----PNTCIFN 206
            EM  K H      P +   +T ++ L ++  ++ A+    + +   R+     PN   ++
Sbjct: 732  EMVGKGH-----HPDVVTYNTLIDSLCKAGDLEEARRL--HGDMSSRVSRCCVPNVVTYS 784

Query: 207  ILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
            +LI   CK G ++ A E+++EM +KS    PN+ITY++ +DGLCK     EA EL   + 
Sbjct: 785  VLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844

Query: 266  SKD-QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
                ++ PD +T++ LIDG C+ G+ D A  + + M   G  PNV  Y  LMNG CK  K
Sbjct: 845  DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDK 904

Query: 325  LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            ++ A  + + M +  + PD I Y+ L++ FC+A  VDEALELL  M  RGC  ++VTFN 
Sbjct: 905  MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964

Query: 385  ILGGLCREGKIEEALGMLEKLWY-DGIYLNKASYRIVLN--------------------- 422
            I+ GLC+  +  EA  M + +    G+  +K +Y  +++                     
Sbjct: 965  IIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP 1024

Query: 423  ----FSCQKGELEKAIELLRL---MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
                F+C    L K  ++ R    ML    +P   T N L+   CKAG  E A+     +
Sbjct: 1025 DTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 1084

Query: 476  VEMGFKPESDSWALLVELICRGRKLLFAFELL 507
            V    +P+  ++  L++ +C+  ++   ++++
Sbjct: 1085 VAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 213/454 (46%), Gaps = 37/454 (8%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           +  T++T++D L +  + +   +V   M       +   +  L+         ER   M 
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
             +       P +   S  ++   ++++VD A   L +        PN   FN +I   C
Sbjct: 419 ESMVD-KGVTPDVITYSVLVDAFCKASRVDEALELL-HGMASRGCTPNVVTFNSIIDGLC 476

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD----- 268
           K      AF++  +M       P+ ITY TLIDGL + GR  +A  L + M   D     
Sbjct: 477 KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFN 536

Query: 269 -------------------------QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
                                    +++PD +T+N+LI G C+ G  ++A  + E M   
Sbjct: 537 CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
              P+V  +  L++G CK G+++ A+++ D M N  + P+ + Y  L++  C++GR++EA
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            + L+EM   GC  D +T+  ++  LCR  + ++AL ++ +L   G   +  +Y I+++ 
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK-- 481
             + G+ E+AI +L  M+ +G  P   T N L+  LCKAG  E+A   L G +       
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR-RLHGDMSSRVSRC 775

Query: 482 --PESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P   ++++L+  +C+  ++  A EL+ E++ K
Sbjct: 776 CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 184/340 (54%), Gaps = 9/340 (2%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           LNLL++S     A +  + S    R +PN   ++ L++   K G        L   ++ +
Sbjct: 118 LNLLVKSGSPAKAIDLFR-SRLPPRCRPNHFTYSTLLRATYKAGG--DVERTLGFFRRIR 174

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            S  ++  Y+ ++  LC+ G    A+E+F   +++D + P  +TYN +I+G C+  ++  
Sbjct: 175 SSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA 234

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++ E +   G +P+V  Y TL++  CK G L+EA+ +  +M +    P+ + Y+ LIN
Sbjct: 235 GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLIN 294

Query: 353 CFCRAGRVDEALELLKEMKERGCKA--DIVTFNIILGGLCREGKIEEALGMLEKLWYDG- 409
             C+ GR+DEA EL++EM  + C    +I+T+N  L GLC++    EA  ++  L  DG 
Sbjct: 295 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGS 353

Query: 410 --IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
             +  +  ++  +++  C+ G++++A  +   M+  G++P+  T N L+  LCKA   E 
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           A   +  +V+ G  P+  ++++LV+  C+  ++  A ELL
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 453



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 177/375 (47%), Gaps = 45/375 (12%)

Query: 94   NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
            N  TY+ +++ L +  + +    ++++M  ++C                           
Sbjct: 779  NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDV------------------------- 813

Query: 154  HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHH 212
                      P++   ++ L+ L + + +  A   ++   +  LR+ P+T  F+ LI   
Sbjct: 814  ---------LPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 864

Query: 213  CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
            CK G  + A  V  +M       PN++TY+ L++GLCK  +   A  + E MV K  + P
Sbjct: 865  CKCGQTDEACNVFDDMIAGGY-VPNVVTYNVLMNGLCKTDKMERAHAMIESMVDK-GVTP 922

Query: 273  DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            D +TY+VL+D FC+   VD A +++  M + GC PNV  + ++++G CK  +  EA ++F
Sbjct: 923  DVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMF 982

Query: 333  DEMK-NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            D+M     L PD I Y TLI+   R G   +A  LL  M +     D   FN  + GL +
Sbjct: 983  DDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSK 1038

Query: 392  EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             G +  AL  + +L    +  +K ++ I++  +C+ G  E+A  L   M+ +   P   T
Sbjct: 1039 LGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 1095

Query: 452  SNELLVRLCKAGMAE 466
               L+  LCKAG  E
Sbjct: 1096 FGALIDGLCKAGQVE 1110



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 4/208 (1%)

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA-GRVDEALEL 366
            +F++   +N   K G   +A ++F        +P+   Y+TL+    +A G V+  L  
Sbjct: 110 TIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGF 169

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE-KLWYDGIYLNKASYRIVLNFSC 425
            + ++       +  +NI+L  LCR G+   AL +   ++  DG+     +Y  ++N  C
Sbjct: 170 FRRIRSS--SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLC 227

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           +  EL   +EL   ++ RG  P   T N L+  LCKAG  E+A      +      P   
Sbjct: 228 KSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVV 287

Query: 486 SWALLVELICRGRKLLFAFELLDELVIK 513
           ++++L+  +C+  ++  A EL+ E+  K
Sbjct: 288 TYSVLINGLCKVGRIDEARELIQEMTRK 315


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 248/538 (46%), Gaps = 86/538 (15%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H AA+  +K +K+P  AL IFN+V ++ GF H   TY  +++KL  + +F+A++ VL +M
Sbjct: 9   HVAAV--LKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEM 66

Query: 122 TYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
                    EG++++ M+++      +  +++F ++     E PS+ + +  +N+L+E  
Sbjct: 67  RLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCE-PSIFSYNAIMNILVEYG 125

Query: 181 QVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
             + A   +L+   +H  + P+ C F I IK  C+     +A  +L  M  SQ    N +
Sbjct: 126 YFNQAHKVYLRM--KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNM-PSQGCELNAV 182

Query: 240 TYSTLIDGLCKNGRFREAIELFEEM----------------------------------V 265
            Y T+I G  +     EA ELF +M                                  V
Sbjct: 183 VYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKV 242

Query: 266 SKDQILPDALTYNVLIDGFCRGG-------KVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            K+ + P+  T+N+ I G CR G       KV  A+  +  M N G  P+ F Y T++ G
Sbjct: 243 LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           + K GK+Q+A  +  + K     PD   Y +LI   C+ G +D AL L +E   +G K  
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG---------- 428
           IV +N ++ GL ++G + +AL ++  +  +G+  +  +Y +V+N  C+ G          
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422

Query: 429 -------------------------ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
                                    +++ AI +L  M   G  P   T N +L  LCKA 
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
             ED       ++E G  P   ++ +L+E +C+ RK+  A +LL+E  I+  G I  P
Sbjct: 483 KPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEE--IRNRGLIPDP 538



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 168/300 (56%), Gaps = 7/300 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  LI   C+ G ++ A  + +E     +  P+++ Y+TLI GL + G   +A++
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLK-PSIVLYNTLIKGLSQQGLVLKALQ 384

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  +M SK+ + PD  TYN++I+G C+ G V  A  ++      G  P++F + TL++G+
Sbjct: 385 LMNDM-SKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGY 443

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  K+  A  + D M +  + PD I Y +++N  C+A + ++ +E  K + E+GC  +I
Sbjct: 444 CKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNI 503

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+NI++  LC+  K+ EAL +LE++   G+  +  S+  V++  C  G+L++A +L R 
Sbjct: 504 ITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRR 563

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK---PESDSWALLVELICR 496
           M  +  + H   +  +++      +  D A  LF   EMG K   P+S ++ ++++  C+
Sbjct: 564 MEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFH--EMGDKGCDPDSYTYRVMIDGFCK 621



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 178/354 (50%), Gaps = 43/354 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+  ++N LIK   ++G +  A +++ +M K  MS P++ TY+ +I+GLCK G   +A
Sbjct: 359 LKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMS-PDIWTYNLVINGLCKMGCVSDA 417

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L    ++K   LPD  T+N LIDG+C+  K+D A  I++ M ++G  P+V  Y +++N
Sbjct: 418 NNLLNAAIAKGY-LPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILN 476

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK  K ++  E F  +      P+ I Y  LI   C+A +V EAL+LL+E++ RG   
Sbjct: 477 GLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIP 536

Query: 378 DIVTFNIILGGLCREGKIEEA--------------------------------LGMLEKL 405
           D V+F  ++ G C  G ++EA                                + M +KL
Sbjct: 537 DPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKL 596

Query: 406 WYD----GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           +++    G   +  +YR++++  C+ G +    + L   +  GF+P   T   ++  LC 
Sbjct: 597 FHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCV 656

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
                +A   +  +V  G  PE+     +V +    +K + A +++ E ++K+S
Sbjct: 657 QHRVHEAVGIVHLMVRTGVVPEA-----VVTIFDADKKAVAAPKIIVEDLLKKS 705



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 172/360 (47%), Gaps = 44/360 (12%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF  +  TY +++  + +    +   A+  +   +  K    ++  L+K  S   L   
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGL--- 378

Query: 149 VLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           VL+    ++ +++E   P +   +  +N L +   V  A N L  +     L P+   FN
Sbjct: 379 VLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYL-PDIFTFN 437

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +CKR  +++A  +L  M    ++ P++ITY+++++GLCK  +  + +E F+ M+ 
Sbjct: 438 TLIDGYCKRLKMDNAIGILDSMWSHGVT-PDVITYNSILNGLCKAAKPEDVMETFK-MIM 495

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +   LP+ +TYN+LI+  C+  KV  A  ++E ++N G  P+  ++ T+++GFC  G L 
Sbjct: 496 EKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLD 555

Query: 327 EAKEVFDEMK------------NFLLK------------------------PDTIGYTTL 350
           EA ++F  M+            N ++                         PD+  Y  +
Sbjct: 556 EAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVM 615

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+ FC+ G V+   + L +  E G    + TF  ++  LC + ++ EA+G++  +   G+
Sbjct: 616 IDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGV 675


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 227/470 (48%), Gaps = 46/470 (9%)

Query: 64  AAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV--------D 115
            AI       +P  A +IF  +   +    N  T  T+L+ L RY    +V        D
Sbjct: 140 TAIGAYVQSGQPHHAFQIFKKMKRLR-LRPNLLTCNTLLNSLVRYPSSHSVSFSREAFND 198

Query: 116 AV----------LRQMTYETC---KFHEGI-FLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           A+             + Y  C   KF + + FLN+M  + NCS                 
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY-NCS----------------- 240

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
             P     +T L+ L +  ++  A++ L    +   L PN   +NIL+  +CK G L+ A
Sbjct: 241 --PDNVTYNTILDALCKKGRLGDARDLL-MDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             V++ M ++ +  P++ TY+ LI+GLC  GR  EA +L +EM    ++LPD ++YN LI
Sbjct: 298 ANVIELMTQNNL-LPDVWTYNMLINGLCNEGRIEEAFKLRDEM-ENLKLLPDVVSYNTLI 355

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           +G     K+  A K++E M   G  PN   +  ++  +CKEGK+ +A     +M+     
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + Y TLIN +C+AG + EA   + EM  +  K D VT N IL  LCRE K+EEA  +
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L      G ++++ SY  ++    + G +++A++L   M  +  +P   T N ++  LC+
Sbjct: 476 LSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQ 535

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G  E A   L  L+E G  P+  ++  ++   CR   +  AF+  +++V
Sbjct: 536 CGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 190/367 (51%), Gaps = 38/367 (10%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A N ++   Q+  L P+   +N+LI   C  G +E AF++  EM+  ++  P++++Y+TL
Sbjct: 297 AANVIELMTQN-NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKL-LPDVVSYNTL 354

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           I+G  +  +  EA +L EEM S+  + P+A+T+N+++  +C+ GK+D A   +  M+ +G
Sbjct: 355 INGCLEWSKISEAFKLLEEM-SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA------- 357
            +P+   Y TL+NG+CK G + EA    DEM    +K D++   T++   CR        
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 358 ----------------------------GRVDEALELLKEMKERGCKADIVTFNIILGGL 389
                                       G VD AL+L  EMKE+      VT+N I+GGL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+ GK E+A+  L +L   G+  ++ +Y  +L+  C++G++EKA +    M+   F P  
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T N LL  LC  GM E A       V  G   ++ ++  L+  +C+  +L  AF LL E
Sbjct: 594 FTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653

Query: 510 LVIKESG 516
           +  KE G
Sbjct: 654 MEEKELG 660



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 188/357 (52%), Gaps = 3/357 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P + + +T +N  +E +++  A   L+  ++   +KPN    NI++K +CK G ++ A  
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEK-GVKPNAVTHNIMVKWYCKEGKMDDASN 404

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            + +M++S  S P+ +TY+TLI+G CK G   EA    +EM  K+  + D++T N ++  
Sbjct: 405 TITKMEESGFS-PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM-DSVTLNTILRT 462

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            CR  K++ A K++   +  G   +  +Y TL+ G+ K+G +  A +++DEMK   + P 
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ Y  +I   C+ G+ ++A+  L E+ E G   D  T+N IL G CREG +E+A     
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+  +    +  +  I+L   C +G LEKA++L    + +G      T N L+  LCK G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
             +DA   L  + E    P+  ++  ++  +    ++  A E + +++ K     QV
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 170/350 (48%), Gaps = 39/350 (11%)

Query: 196 LRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-------------------- 234
           LRL  P+  + +  I  + + G    AF++ K+MK+ ++                     
Sbjct: 128 LRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSH 187

Query: 235 -----------------YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
                             PN+ T++ +I G C   +F++A+E F  ++ K    PD +TY
Sbjct: 188 SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVE-FLNVMGKYNCSPDNVTY 246

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N ++D  C+ G++  A+ ++  MK+ G  PN   Y  L+ G+CK G L+EA  V + M  
Sbjct: 247 NTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             L PD   Y  LIN  C  GR++EA +L  EM+      D+V++N ++ G     KI E
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +LE++   G+  N  ++ I++ + C++G+++ A   +  M   GF P   T N L+ 
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             CKAG   +A   +  +     K +S +   ++  +CR +KL  A++LL
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 25/241 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  +N +I   C+ G  E A   L E+ +S +  P+  TY+T++ G C+ G   +A +
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL-LPDETTYNTILHGYCREGDVEKAFQ 579

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              +MV ++   PD  T N+L+ G C  G +++A K+     + G   +   Y TL+   
Sbjct: 580 FHNKMV-ENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC---- 375
           CKEG+L +A  +  EM+   L PD   Y  +I     +GR+ EA E + +M E+G     
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQ 698

Query: 376 -------------------KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
                               +  V ++  +  LC EGK ++A+ +  +    GI ++K++
Sbjct: 699 VLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758

Query: 417 Y 417
           Y
Sbjct: 759 Y 759



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 73/312 (23%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN-------------- 317
           P     +  I  + + G+   A +I + MK     PN+    TL+N              
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 318 ------------------------GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
                                   G+C E K ++A E  + M  +   PD + Y T+++ 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 354 FCRAGRVDEALELLKEMKERG---------------CK--------------------AD 378
            C+ GR+ +A +LL +MK RG               CK                     D
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + T+N+++ GLC EG+IEEA  + +++    +  +  SY  ++N   +  ++ +A +LL 
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  +G  P+  T N ++   CK G  +DA+  +  + E GF P+  ++  L+   C+  
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 499 KLLFAFELLDEL 510
            +  AF  +DE+
Sbjct: 433 NMGEAFRTMDEM 444


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 222/431 (51%), Gaps = 10/431 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T +++L+     K+     A++ QM  E     + +  N + H     LH + 
Sbjct: 145 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-EMGYKPDTVTFNTLIH--GLFLHNKA 201

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    +  + +   +P L      +N L +   +DLA + LK   +  +++ +  I+N 
Sbjct: 202 SEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYNT 260

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK   ++ AF +  +M+   +  P++ TY++LI  LC  GR+ +A  L   M+ +
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIR-PDVFTYNSLISCLCNYGRWSDASRLLSNMIER 319

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I P+ +T++ LID F + GK+  A+K+ + M     +P++F Y++L+NGFC   +L E
Sbjct: 320 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AK +F+ M +    P+ + Y TLI  FC+A RV+E +EL +EM +RG   + VT+N ++ 
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G  + A  + +K+  DG+  +  +Y I+L+  C+ G+LEKA+ +   +      P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N ++  +CKAG  ED       L   G KP    +  ++   CR      A  L 
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558

Query: 508 DELVIKESGTI 518
            E+  KE GT+
Sbjct: 559 REM--KEDGTL 567



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 215/427 (50%), Gaps = 12/427 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
           + G+  +  T+ T++  L  + K     A++ QM    C+      G  +N +    +  
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTC 203
           L   +L+   K     + +  +   +T ++ L +   +D A  F  ++    + ++P+  
Sbjct: 238 LALSLLKKMEK----GKIEADVVIYNTIIDGLCKYKHIDDA--FALFNKMETKGIRPDVF 291

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N LI   C  G    A  +L  M + +++ PN++T+S LID   K G+  EA +L++E
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ K  I PD  TY+ LI+GFC   ++D AK + E M +  C PNV  Y TL+ GFCK  
Sbjct: 351 MI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +++E  E+F EM    L  +T+ Y TLI    +AG  D A ++ K+M   G   DI+T++
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I+L GLC+ GK+E+AL + E L    +  +  +Y I++   C+ G++E   +L   +  +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P+      ++   C+ G+ E+A      + E G  P+S  +  L+    R      +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAAS 589

Query: 504 FELLDEL 510
            EL+ E+
Sbjct: 590 AELIKEM 596



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 215/461 (46%), Gaps = 42/461 (9%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           KA   V   D  V    +   +++GA ++ +    +   AL +   + + K    +   Y
Sbjct: 200 KASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIY 258

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
            TI+D L +YK  +   A+  +M  ET      +F                         
Sbjct: 259 NTIIDGLCKYKHIDDAFALFNKM--ETKGIRPDVF------------------------- 291

Query: 159 ITREKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
                 +  ++ +CL N    S+   L  N ++      ++ PN   F+ LI    K G 
Sbjct: 292 ------TYNSLISCLCNYGRWSDASRLLSNMIER-----KINPNVVTFSALIDAFVKEGK 340

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L  A ++  EM K  +  P++ TYS+LI+G C + R  EA  +FE M+SKD   P+ +TY
Sbjct: 341 LVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTY 398

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N LI GFC+  +V+   ++   M   G   N   Y TL+ G  + G    A+++F +M +
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             + PD I Y+ L++  C+ G++++AL + + +++   + DI T+NI++ G+C+ GK+E+
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
              +   L   G+  N   Y  +++  C+KG  E+A  L R M   G LP     N L+ 
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 578

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
              + G    +A  +  +   GF  ++ + ++++ ++  GR
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 157/294 (53%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ A  +  EM +S+   P+++ ++ L+  + K  +F   I L E M +  +I  D  +Y
Sbjct: 61  LDDAIGLFGEMVQSR-PLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNL-RISYDLYSY 118

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N+LI+ FCR  ++  A  ++  M   G  P++   ++L+NG+C   ++ +A  + D+M  
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              KPDT+ + TLI+      +  EA+ L+ +M +RGC+ D+VT+  ++ GLC+ G I+ 
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +L+K+    I  +   Y  +++  C+   ++ A  L   M  +G  P   T N L+ 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P   +++ L++   +  KL+ A +L DE++
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 170/344 (49%), Gaps = 38/344 (11%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   +  L+ + +  + DL  + L    Q+LR+  +   +NILI   C+R  L 
Sbjct: 74  SRPLPSIVEFNKLLSAIAKMKKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRSQLP 132

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSK----------- 267
            A  VL +M K  + Y P+++T S+L++G C + R  +A+ L ++MV             
Sbjct: 133 LALAVLGKMMK--LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNT 190

Query: 268 ------------------DQIL-----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
                             DQ++     PD +TY  +++G C+ G +D A  +++ M+   
Sbjct: 191 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +V  Y T+++G CK   + +A  +F++M+   ++PD   Y +LI+C C  GR  +A 
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            LL  M ER    ++VTF+ ++    +EGK+ EA  + +++    I  +  +Y  ++N  
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           C    L++A  +  LM+ +   P+  T N L+   CKA   E+ 
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 14/439 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI N +S   GF  +  +Y T+L  L   ++++ V  +  +M  + C  +E  F  L+
Sbjct: 241 AKEILNRLSSY-GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 299

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           + F    + ER +++  ++  H  T   P+    +  +N + +  +VD A +FL     +
Sbjct: 300 RFFCRGGMVERAIQVLQQMSQHGCT---PNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+T  +  +++  C+ G  E A E+L EM +     PN +T++T I  LC+ G   
Sbjct: 357 -GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCP-PNEVTFNTFICILCQKGLIE 414

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI+L E M      +   +TYN L+ GFC  G+VD A   +E   N  C PN   YTTL
Sbjct: 415 QAIKLIELMPEYGCSV-GIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYTTL 470

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   +L  A E+  EM       + + +  L++ FC+ G V+EA+EL+ +M E GC
Sbjct: 471 LTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 530

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +++TFN +L G+ ++   EEAL +L  L   G+ L+  +Y  V++   ++   E+AI+
Sbjct: 531 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQ 590

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELI 494
           +L  +   G  P     N++L  LCK     D AI  F  +V  G  P   ++ +L+E +
Sbjct: 591 MLHAVQDMGMRPKVGMYNKILFALCKR-CETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649

Query: 495 CRGRKLLFAFELLDELVIK 513
                L  A  +L EL  K
Sbjct: 650 AHEGLLKEARYVLSELYAK 668



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 193/352 (54%), Gaps = 12/352 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLE 219
           +PS+   +  L  + +S+    A N L      +R K   PN   +N++I   C+ G ++
Sbjct: 184 QPSVVTYTVLLEAVCKSSGFGEAMNVL----DEMRAKGCTPNIVTYNVIINGMCREGRVD 239

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A E+L  +       P++++Y+T++ GLC   R+ +   LF EMV K + +P+ +T+++
Sbjct: 240 DAKEILNRLSSYGFQ-PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-KCVPNEVTFDM 297

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L+  FCRGG V+RA ++++ M  +GC PN      ++N  CK+G++ +A +  + M  + 
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             PDTI YTT++   CRAGR + A ELL EM  + C  + VTFN  +  LC++G IE+A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            ++E +   G  +   +Y  +++  C +G ++ A+EL   + C    P+  T   LL  L
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 474

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           C A   + AA  L  +++      + ++ +LV   C+   +  A EL+++++
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 526



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 236/499 (47%), Gaps = 55/499 (11%)

Query: 35  ANTPKA--DPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFN 92
           A+TP+A   PP  +  T    R      S GA+ +         C+  +      Q+G  
Sbjct: 136 ASTPRAASSPPCPSRPTPTPTRP-----SSGASATAEGSATRSPCSTML------QRGCQ 184

Query: 93  HNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEM 152
            +  TY  +L+ + +   F     VL +M  + C  +   +  ++         +   E+
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQ------------------------------- 181
            +++     + P + + +T L  L  + +                               
Sbjct: 245 LNRLSSYGFQ-PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 303

Query: 182 ----VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
               V+ A   L+  +QH    PNT + NI+I   CK+G ++ A++ L  M     + P+
Sbjct: 304 RGGMVERAIQVLQQMSQH-GCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN-PD 361

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            I+Y+T++ GLC+ GR+  A EL  EMV K+   P+ +T+N  I   C+ G +++A K++
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKN-CPPNEVTFNTFICILCQKGLIEQAIKLI 420

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           E M   GC+  +  Y  L++GFC +G++  A E+F+   N   +P+TI YTTL+   C A
Sbjct: 421 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTLLTGLCHA 477

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            R+D A ELL EM ++ C  + VTFN+++   C++G +EEA+ ++ ++   G   N  ++
Sbjct: 478 ERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITF 537

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +L+   +    E+A+ELL  ++ +G      T + ++  L +    E+A   L  + +
Sbjct: 538 NTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQD 597

Query: 478 MGFKPESDSWALLVELICR 496
           MG +P+   +  ++  +C+
Sbjct: 598 MGMRPKVGMYNKILFALCK 616



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 162/316 (51%), Gaps = 5/316 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   + +L++  CK      A  VL EM+ ++   PN++TY+ +I+G+C+ GR  +A 
Sbjct: 184 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMR-AKGCTPNIVTYNVIINGMCREGRVDDAK 242

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+   + S     PD ++Y  ++ G C   + D  K +   M +  C PN   +  L+  
Sbjct: 243 EILNRLSSYG-FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FC+ G ++ A +V  +M      P+T     +IN  C+ GRVD+A + L  M   GC  D
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            +++  +L GLCR G+ E A  +L ++       N+ ++   +   CQKG +E+AI+L+ 
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           LM   G      T N L+   C  G   D+A+ LF    +  +P + ++  L+  +C   
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRV-DSALELFN--NLPCEPNTITYTTLLTGLCHAE 478

Query: 499 KLLFAFELLDELVIKE 514
           +L  A ELL E++ K+
Sbjct: 479 RLDAAAELLAEMIQKD 494



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 112/214 (52%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC P+V  YT L+   CK     EA  V DEM+     P+ + Y  +IN  CR GR
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           VD+A E+L  +   G + DIV++  +L GLC   + ++   +  ++       N+ ++ +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++ F C+ G +E+AI++L+ M   G  P+    N ++  +CK G  +DA   L  +   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P++ S+  ++  +CR  +   A ELL E+V K
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 391


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 244/473 (51%), Gaps = 16/473 (3%)

Query: 52  DARKR-SRFISHGAAISLIKCEKEPQC----------ALEIFNTVSEQKGFNHNNATYAT 100
           +ARK   + +++G A+S   C     C           L++F+    Q G   N  +Y  
Sbjct: 57  EARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFP-QLGVCWNTESYNI 115

Query: 101 ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPIT 160
           +++ L R  K      +L +M ++ C      +  ++  + +    ++V+++  ++  + 
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ-LK 174

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
             KP+L   S+ + LL +S +V   +  L+   +   + P+  I+  LI   CK G  ++
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKR-GVFPDHVIYTTLIDGFCKLGNTQA 233

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A+++  EM+  ++  P+ I +S LI GL  +G+  EA +LF EM+ K    PD +TY  L
Sbjct: 234 AYKLFSEMEAREI-VPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG-FEPDEVTYTAL 291

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG+C+ G++ +A  +   M   G  PNV  YT L +G CK G+L  A E+  EM    L
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           + +   Y T++N  C+AG + +A++L++EMKE G   D +T+  ++    + G++ +A  
Sbjct: 352 QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARE 411

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +L ++   G+     ++ +++N  C  G+LE    LL+ ML +G +P+ AT N ++ + C
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                  +     G+   G  P+S+++ +L++  C+ R +  A+ L  E+V K
Sbjct: 472 IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK 524



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 195/402 (48%), Gaps = 10/402 (2%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIK--CE-KEPQCALEIFNTVSEQKGFNHNN 95
           K+   VE      +  KR  F  H    +LI   C+    Q A ++F+ + E +    ++
Sbjct: 192 KSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM-EAREIVPDS 250

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF-H 154
             ++ ++  L+   K    D +  +M  +  +  E  +  L+  +  C L E     F H
Sbjct: 251 IAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY--CKLGEMKKAFFLH 308

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
                    P++   +   + L +S ++D A   L +      L+ N   +N ++   CK
Sbjct: 309 NQMVQIGLTPNVVTYTALADGLCKSGELDTANELL-HEMCRKGLQLNISTYNTIVNGLCK 367

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
            G +  A ++++EMK++ + +P+ ITY+TL+D   K G   +A EL  EM+ +  + P  
Sbjct: 368 AGNILQAVKLMEEMKEAGL-HPDTITYTTLMDAYYKTGEMVKARELLREMLDRG-LQPTV 425

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +T+NVL++G C  GK++  ++++++M   G  PN   Y ++M  +C    ++ + E++  
Sbjct: 426 VTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRG 485

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M    + PD+  Y  LI   C+A  + EA  L KEM E+       ++N ++ G  +  K
Sbjct: 486 MCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKK 545

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           + EA  + E++  +G+  +   Y + ++ + ++G +E  +EL
Sbjct: 546 LLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 137/266 (51%), Gaps = 2/266 (0%)

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           FL      + L PN   +  L    CK G L++A E+L EM +  +   N+ TY+T+++G
Sbjct: 306 FLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQL-NISTYNTIVNG 364

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           LCK G   +A++L EEM  +  + PD +TY  L+D + + G++ +A++++  M + G  P
Sbjct: 365 LCKAGNILQAVKLMEEM-KEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQP 423

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
            V  +  LMNG C  GKL++ + +   M    + P+   Y +++  +C    +  + E+ 
Sbjct: 424 TVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY 483

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           + M  +G   D  T+NI++ G C+   ++EA  + +++      L  +SY  ++    ++
Sbjct: 484 RGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKR 543

Query: 428 GELEKAIELLRLMLCRGFLPHYATSN 453
            +L +A +L   M   G +      N
Sbjct: 544 KKLLEARQLFEEMRREGLVASAEIYN 569



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 14/291 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  + D L +  + +  + +L +M    C+  +G+ LN+  + +  +   
Sbjct: 313 QIGLTPNVVTYTALADGLCKSGELDTANELLHEM----CR--KGLQLNISTYNTIVNGLC 366

Query: 148 RVLEMFHKIHPITREK-----PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
           +   +   +  +   K     P     +T ++   ++ ++  A+  L+       L+P  
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR-GLQPTV 425

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             FN+L+   C  G LE    +LK M +  +  PN  TY++++   C     R + E++ 
Sbjct: 426 VTFNVLMNGLCMSGKLEDGERLLKWMLEKGI-MPNAATYNSIMKQYCIRNNMRISTEIYR 484

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            M ++  ++PD+ TYN+LI G C+   +  A  + + M     N    +Y  L+ GF K 
Sbjct: 485 GMCAQG-VVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKR 543

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            KL EA+++F+EM+   L      Y   ++     G ++  LEL  E  E+
Sbjct: 544 KKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 107/215 (49%), Gaps = 3/215 (1%)

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC-RAGR 359
           K+ G +P+VF+         + G L EA++ FD++ N+ +          + C   +   
Sbjct: 33  KDWGSDPHVFD--VFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDM 90

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +   L++  E  + G   +  ++NI++  L R GKI EA  +L ++ + G   +  SY  
Sbjct: 91  LGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTT 150

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C  GEL+K ++L++ M  +G  P+  T + +++ LCK+G   +    L  +++ G
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             P+   +  L++  C+      A++L  E+  +E
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEARE 245


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 237/483 (49%), Gaps = 44/483 (9%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++IKC+K+P  ALE+FN++ ++ GF H  +TY ++++KL  Y KFEA++ VL  M  E  
Sbjct: 12  AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENV 70

Query: 127 KFH--EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
             H  EG+++  MK++      +  + +F ++     E P++ + +  +++L++S   D 
Sbjct: 71  GNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCE-PTVFSYNAIMSVLVDSGYFDQ 129

Query: 185 AQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
           A   +++  ++ +   P+   F I +K  CK     +A  +L  M  SQ    N++ Y T
Sbjct: 130 AHKVYMRMRDRGI--TPDVYSFTIRMKSFCKTSRPHAALRLLNNMS-SQGCEMNVVAYCT 186

Query: 244 LIDG-----------------------------------LCKNGRFREAIELFEEMVSKD 268
           ++ G                                   LCK G  +E  +L ++++ K 
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI-KR 245

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LP+  TYN+ I G C+ G++D A +++  +   G  P+V  Y  L+ G CK  K QEA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           +    +M N  L+PD+  Y TLI  +C+ G V  A  ++ +    G   D  T+  ++ G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC EG+   AL +  +    GI  N   Y  ++     +G + +A +L   M  +G +P 
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N L+  LCK G   DA   +  ++  G+ P+  ++ +L+       K+  A E+LD
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485

Query: 509 ELV 511
            ++
Sbjct: 486 VML 488



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/311 (36%), Positives = 180/311 (57%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N+ I+  C+RG L+ A  ++  + + Q   P++ITY+ LI GLCKN +F+EA  
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIE-QGPKPDVITYNNLIYGLCKNSKFQEAEV 307

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              +MV+ + + PD+ TYN LI G+C+GG V  A++I+     NG  P+ F Y +L++G 
Sbjct: 308 YLGKMVN-EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C EG+   A  +F+E     +KP+ I Y TLI      G + EA +L  EM E+G   ++
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TFNI++ GLC+ G + +A G+++ +   G + +  ++ I+++    + ++E A+E+L +
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML  G  P   T N LL  LCK    ED       +VE G  P   ++ +L+E +CR RK
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546

Query: 500 LLFAFELLDEL 510
           L  A  LL+E+
Sbjct: 547 LDEALGLLEEM 557



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 164/320 (51%), Gaps = 10/320 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    FNIL+   CK G +  A  ++K M  S+  +P++ T++ LI G     +   A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMI-SKGYFPDIFTFNILIHGYSTQLKMENA 480

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +E+ + M+  + + PD  TYN L++G C+  K +   +  + M   GC PN+F +  L+ 
Sbjct: 481 LEILDVMLD-NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCK 376
             C+  KL EA  + +EMKN  + PD + + TLI+ FC+ G +D A  L ++M+E     
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           +   T+NII+     +  +  A  + +++    +  +  +YR++++  C+ G +    + 
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKF 659

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M+  GF+P   T   ++  LC      +AA  +  +V+ G  PE+      V  IC 
Sbjct: 660 LLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICD 713

Query: 497 -GRKLLFAFELLDELVIKES 515
             +K + A +L+ E ++K+S
Sbjct: 714 VDKKEVAAPKLVLEDLLKKS 733



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 4/198 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            +E + T+ E KG   N  T+  +L+ L RY+K +    +L +M  ++       F  L+
Sbjct: 515 VMETYKTMVE-KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F      +    +F K+    +   S    +  ++   E   V +A+   +       
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC- 632

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   + +++   CK G +   ++ L EM ++    P+L T   +I+ LC   R  EA
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF-IPSLTTLGRVINCLCVEDRVYEA 691

Query: 258 IELFEEMVSKDQILPDAL 275
             +   MV K  ++P+A+
Sbjct: 692 AGIIHRMVQKG-LVPEAV 708


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 226/448 (50%), Gaps = 33/448 (7%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT----- 122
           ++ C    Q ALE+F++VS +     N   Y+ I+  L   K +     ++R +      
Sbjct: 44  ILTCRTANQ-ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQK 102

Query: 123 ----------------YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSL 166
                            E+ KF   +F  L+  FS   L E  L +++K+  +    P++
Sbjct: 103 SRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL----PAM 158

Query: 167 KAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVL 225
           +A +  L+ L++  + D       Y +   R   PN   +  LI   C++G    AF + 
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKV--YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
            EM + ++ +P ++ Y+ LI GLC   R  EA  +F  M     +LP+  TYN ++DG+C
Sbjct: 217 DEMIEKKI-FPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMMDGYC 274

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           +   V +A ++   M  +G  PNV  +  L++G CK  ++  A++   +M +F + P+  
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  LI+ +C+AG + EAL L  E+++     D+ T++I++ GLC   ++EEA G+L+++
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G   N  +Y  +++  C++G +EKAIE+   M  +G  P+  T + L+   CKAG  
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 466 EDAAIALFG-LVEMGFKPESDSWALLVE 492
           E AA+ L+  +V  G  P+  ++  L++
Sbjct: 455 E-AAMGLYTEMVIKGLLPDVVAYTALID 481



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 207/428 (48%), Gaps = 18/428 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F+ + E+K F      Y  ++  L    +    +++ R M       +   +  +M
Sbjct: 212 AFRLFDEMIEKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             +   +  ++ LE++ ++       P++      ++ L +++++  A+ FL        
Sbjct: 271 DGYCKIAHVKKALELYXEMLG-DGLLPNVVTFGILIDGLCKTDEMVSARKFL-IDMASFG 328

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  ++N LI  +CK G L  A  +  E++K ++  P++ TYS LI GLC   R  EA
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI-LPDVFTYSILIKGLCGVDRMEEA 387

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM  K   LP+A+TYN LIDG+C+ G +++A ++   M   G  PN+  ++TL++
Sbjct: 388 DGLLQEM-KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK GK++ A  ++ EM    L PD + YT LI+   + G   EA  L KEM+E G   
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 378 DIVTFNIILGGLCREGKIEEALGM-LEKLWYDGI------------YLNKASYRIVLNFS 424
           ++ T + ++ GLC++G+I +A+ + L K   D                N   Y  ++   
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C  G + KA +    M C G  P   T   ++    +A    D  +    +++MG  P S
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626

Query: 485 DSWALLVE 492
             + +L +
Sbjct: 627 SVYRVLAK 634



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 15/250 (6%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI  +CK G +E A EV  +M +  +  PN+IT+STLIDG CK G+   A+ 
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIE-PNIITFSTLIDGYCKAGKMEAAMG 459

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+ EMV K  +LPD + Y  LIDG  + G    A ++ + M+  G +PNVF  + L++G 
Sbjct: 460 LYTEMVIKG-LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 320 CKEGKLQEAKEVF-------------DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           CK+G++ +A ++F             +E+   L  P+ + YT LI   C  GR+ +A + 
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             +M+  G + D+ T  +I+ G  R   + + + +   +   GI  N + YR++     +
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEE 638

Query: 427 KGELEKAIEL 436
            G L+ A+  
Sbjct: 639 SGYLKSALSF 648



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 151/292 (51%), Gaps = 9/292 (3%)

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           S F VL  ++ S+ + PN+  +  LI    + G   EA+ ++ +M     +LP     N+
Sbjct: 111 SVFNVLSRLESSKFT-PNV--FGVLIIAFSEMGLVEEALWVYYKM----DVLPAMQACNM 163

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           ++DG  + G+ D   K+   M   G +PNV  Y TL++G C++G   +A  +FDEM    
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P  + YT LI   C   R+ EA  + + M+  G   ++ T+N ++ G C+   +++AL
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +  ++  DG+  N  ++ I+++  C+  E+  A + L  M   G +P+    N L+   
Sbjct: 284 ELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 460 CKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLFAFELLDEL 510
           CKAG   + A++L   +E     P+  ++++L++ +C   ++  A  LL E+
Sbjct: 344 CKAGNLSE-ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 133/286 (46%), Gaps = 17/286 (5%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY+ ++  L    + E  D +L++M  +    +   +  L+  +      E+ +E+  ++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKR 215
                E P++   ST ++   ++ +++ A     Y+   ++ L P+   +  LI  H K 
Sbjct: 430 TEKGIE-PNIITFSTLIDGYCKAGKMEAAMGL--YTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI----- 270
           G  + AF + KEM+++ + +PN+ T S LIDGLCK+GR  +AI+LF      D       
Sbjct: 487 GNTKEAFRLHKEMQEAGL-HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 271 -------LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                   P+ + Y  LI G C  G++ +A K    M+ +G  P+VF    ++ G  +  
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAM 605

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
            L++   +  ++    + P++  Y  L   +  +G +  AL    E
Sbjct: 606 HLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 34/243 (13%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           R  +A++LF +M   D   PD +T  V +      G +D  + I  ++++ G + ++   
Sbjct: 729 RPNKALQLFRQM-QMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLN 787

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            +L+N + K G++  A+ +FD  +    K D   +T++I      G+ +EAL+L  EMKE
Sbjct: 788 NSLINMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMKE 843

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              +A             R G+ E +L          +  N  ++  VL      G +E+
Sbjct: 844 TNKRARKNK---------RNGEXESSL----------VLPNDVTFMGVLMACSHAGLVEE 884

Query: 433 AIELLRLM----LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
             +  R M      R  + H+    +L   LC+AG+  +A      +++M  +P +  W 
Sbjct: 885 GKQHFRSMKEDYSLRPRISHFGCMVDL---LCRAGLLTEAYEF---ILKMPVRPNAVVWR 938

Query: 489 LLV 491
            L+
Sbjct: 939 TLL 941



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 101/264 (38%), Gaps = 38/264 (14%)

Query: 150  LEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            L+M   IH   R +     L   ++ +N+  +  ++  A+     +      K +   + 
Sbjct: 765  LDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQ-----KKDVTTWT 819

Query: 207  ILIKHHCKRGTLESAFEVLKEMKK---------------SQMSYPNLITYSTLIDGLCKN 251
             +I  H   G  E A ++  EMK+               S +  PN +T+  ++      
Sbjct: 820  SMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHA 879

Query: 252  GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            G   E  + F  M     + P    +  ++D  CR G +  A    EF+      PN   
Sbjct: 880  GLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVV 936

Query: 312  YTTLMNGFC-----KEGKLQEAKEVFDEMKNFL--LKPDTIGYTTLI-NCFCRAGRVDEA 363
            + TL+ G C       G      ++  E +  L  L+P  +G   ++ N +   G  D+ 
Sbjct: 937  WRTLL-GACSLQGDSNGNGNSNIKIXSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKK 995

Query: 364  LELLKEMKER---GCKADIVTFNI 384
            + +  ++K+R   GC +  V  +I
Sbjct: 996  MLVRNQIKQRRDPGCSSIEVGIDI 1019


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 173/314 (55%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I  +CK    + AF  L+ M    +  PNLIT++ +I+GLC++GR +E  E
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLE-PNLITFNMIINGLCRDGRLKETSE 74

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  EM S+   +PD +TYN L++G+C+ G   +A  +   M  NG +PNV  YT+L+N  
Sbjct: 75  VLVEM-SRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSM 133

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G L  A E FD+M    L P+   YTT+IN F + G +DEA  +L EM   G    I
Sbjct: 134 CKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSI 193

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++ G C  G++EEA+G+L+ +   G+  +  SY  +++   +  EL++A ++   
Sbjct: 194 VTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVE 253

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +  LP   T + L+  LC+     +A      ++ +   P+  ++  L+   C+   
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGD 313

Query: 500 LLFAFELLDELVIK 513
           L  A  L DE++ K
Sbjct: 314 LNKALHLHDEMIQK 327



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 185/367 (50%), Gaps = 38/367 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T ++   +  + D A  FL+ S     L+PN   FN++I   C+ G L+   E
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLR-SMGLKGLEPNLITFNMIINGLCRDGRLKETSE 74

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VL EM +     P+ +TY+TL++G CK G F +A+ L  EMV ++ + P+ +TY  LI+ 
Sbjct: 75  VLVEMSRKGY-VPDEVTYNTLVNGYCKEGNFHQALVLHAEMV-RNGLSPNVVTYTSLINS 132

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G ++RA +  + M   G  PN   YTT++NGF ++G L EA  V +EM      P 
Sbjct: 133 MCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPS 192

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG---------------- 387
            + Y  LIN  C  GR++EA+ LL++M  +G   D+V+++ I+                 
Sbjct: 193 IVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKV 252

Query: 388 -------------------GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
                              GLC + ++ EA  M +++    +  ++ +Y  ++N  C++G
Sbjct: 253 EMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEG 312

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +L KA+ L   M+ +GFLP   T N L+  L K   +++A   L  L      P + ++ 
Sbjct: 313 DLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYN 372

Query: 489 LLVELIC 495
            L+E  C
Sbjct: 373 TLIENCC 379



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 227/485 (46%), Gaps = 62/485 (12%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-SNCSLHE 147
           KG   N  T+  I++ L R  + +    VL +M+ +     E  +  L+  +    + H+
Sbjct: 47  KGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQ 106

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
            ++   H         P++   ++ +N + ++  ++ A  F  +   H+R L PN   + 
Sbjct: 107 ALV--LHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEF--FDQMHVRGLCPNERTYT 162

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I    ++G L+ A+ VL EM +S    P+++TY+ LI+G C  GR  EAI L ++MV 
Sbjct: 163 TIINGFAQQGLLDEAYRVLNEMTRSGF-IPSIVTYNALINGHCVLGRMEEAIGLLQDMVG 221

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  +LPD ++Y+ +I GF R  ++DRA ++   M      P+   Y++L+ G C++ +L 
Sbjct: 222 KG-VLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLT 280

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++F EM    L PD   YTTLIN +C+ G +++AL L  EM ++G   D VT+N+++
Sbjct: 281 EACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLI 340

Query: 387 GGL--------------------------------------------------CREGKIE 396
            GL                                                  C +G ++
Sbjct: 341 NGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMD 400

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  + E +       N+A Y ++++  C+ G + KA +L + M+   F+PH  T   L+
Sbjct: 401 EADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALV 460

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL----VI 512
             L   GM  +    +  ++      +++   +LVE+  +   +   F LL E+    +I
Sbjct: 461 KALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLI 520

Query: 513 KESGT 517
             +GT
Sbjct: 521 PSTGT 525



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 138/257 (53%), Gaps = 1/257 (0%)

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
            +  F+EM  ++  LP+ +TYN +IDG+C+  + D A   +  M   G  PN+  +  ++
Sbjct: 2   GLRFFKEM-ERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG C++G+L+E  EV  EM      PD + Y TL+N +C+ G   +AL L  EM   G  
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++VT+  ++  +C+ G +  A+   +++   G+  N+ +Y  ++N   Q+G L++A  +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M   GF+P   T N L+   C  G  E+A   L  +V  G  P+  S++ ++    R
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 497 GRKLLFAFELLDELVIK 513
            ++L  AF++  E++ K
Sbjct: 241 NQELDRAFQMKVEMIGK 257



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 183/401 (45%), Gaps = 30/401 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E F+ +   +G   N  TY TI++  A+    +    VL +MT        G   +++
Sbjct: 142 AMEFFDQM-HVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT------RSGFIPSIV 194

Query: 138 KHFSNCSLH---ERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYS 192
            + +  + H    R+ E    +  +  +   P + + ST ++    + ++D A   +K  
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQ-MKVE 253

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                + P+   ++ LI+  C++  L  A ++ +EM   ++  P+  TY+TLI+  CK G
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLP-PDEFTYTTLINAYCKEG 312

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              +A+ L +EM+ K   LPDA+TYNVLI+G  +  +   A++++  +  +   P+   Y
Sbjct: 313 DLNKALHLHDEMIQKG-FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTY 371

Query: 313 TTLM---------------NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
            TL+                GFC +G + EA +VF+ M N   KP+   Y  +I+  CR 
Sbjct: 372 NTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRI 431

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G V +A +L KEM         VT   ++  L  EG   E   ++  +       +    
Sbjct: 432 GNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELS 491

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           ++++  + ++G ++    LL  M   G +P   T    + R
Sbjct: 492 KVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAIAR 532


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 218/440 (49%), Gaps = 17/440 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A++ F+  + Q G+ H+  T   +L    R KK +    + +      C      +  L+
Sbjct: 115 AVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLI 174

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK----PSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             F      ++   +  ++     EK    P     +T +  L ++ +VD A   + Y +
Sbjct: 175 NGFCKARDFQQAYRLLDEM-----EKRGIVPHNAVYNTIIKGLCDNGRVDSA--LVHYRD 227

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
                 P+   + IL+   CK   +  A  +L++M ++  + PN++TY+TLI+G CK G 
Sbjct: 228 MQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCA-PNVVTYNTLINGFCKLGN 286

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA+ LF +M+ ++   PD  TYN+LIDG+C+  +     K+++ M   GC PN   Y 
Sbjct: 287 MDEAVVLFNQML-ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 345

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TLM+   K GK  +A  +   M     KP    +  +I+ FC+ G++D A EL + M +R
Sbjct: 346 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 405

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  DI T+NI++ G CR  +I++A  +LE++   G   +  +Y  +++  C+  ++++A
Sbjct: 406 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            E+  ++   G+     T + L+  LCK+   +DA   L  +   G  P+  ++ +L+  
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525

Query: 494 ICRG----RKLLFAFELLDE 509
            C+     + L F  E+LD+
Sbjct: 526 FCKADQLDKSLAFFSEMLDK 545



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 169/311 (54%), Gaps = 3/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P++  ++ LI   CK    + A+ +L EM+K  +  P+   Y+T+I GLC NGR   A+ 
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGI-VPHNAVYNTIIKGLCDNGRVDSALV 223

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            + +M  +    P  +TY +L+D  C+  ++  A  I+E M   GC PNV  Y TL+NGF
Sbjct: 224 HYRDM--QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 281

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G + EA  +F++M      PD   Y  LI+ +C+  R  +  +LL+EM + GC+ + 
Sbjct: 282 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 341

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N ++  L + GK  +A  + + +       +  ++ ++++  C+ G+L+ A EL +L
Sbjct: 342 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  RG LP   T N ++   C+A   +DA   L  + E G  P+  ++  +V  +C+  +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461

Query: 500 LLFAFELLDEL 510
           +  A+E+ + L
Sbjct: 462 VDEAYEVYEVL 472



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 235/458 (51%), Gaps = 42/458 (9%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           ++ TY+T+++   + + F+    +L +M       H  ++  ++K   +   + RV    
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCD---NGRVDSAL 222

Query: 154 HKIHPITRE-KPSLKAISTCLNLLIESNQVD-------------LAQNFLKYS------- 192
                + R   PS+   +  ++ L +S ++               A N + Y+       
Sbjct: 223 VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282

Query: 193 ------------NQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
                       NQ L     P+   +NILI  +CK+   +   ++L+EM K     PN 
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE-PNF 341

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           ITY+TL+D L K+G++ +A  L + M+ +D   P   T+N++ID FC+ G++D A ++ +
Sbjct: 342 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRD-CKPSHFTFNLMIDMFCKVGQLDLAYELFQ 400

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M + GC P+++ Y  +++G C+  ++ +A+++ + M      PD + Y ++++  C+A 
Sbjct: 401 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 460

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           +VDEA E+ + ++  G   D+VT + ++ GLC+  ++++A  +L ++  +G   +  +Y 
Sbjct: 461 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 520

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I+++  C+  +L+K++     ML +G +P   T + ++ +LCK+    D  + L  ++E 
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           G  P++  +  +++ +C+      A+EL    ++K++G
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYK--LMKQTG 616



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 208/421 (49%), Gaps = 22/421 (5%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY  ++D L +  +      +L  M    C  +   +  L+  F      +  + +F+++
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 297

Query: 157 HPITREKPSLKAISTCLNLLIES--------NQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                E      + T  N+LI+         +   L Q  +KY       +PN   +N L
Sbjct: 298 ----LENSCSPDVFT-YNILIDGYCKQERPQDGAKLLQEMVKYG-----CEPNFITYNTL 347

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +    K G    AF + + M +     P+  T++ +ID  CK G+   A ELF+ M  + 
Sbjct: 348 MDSLVKSGKYIDAFNLAQMMLRRDCK-PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR- 405

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
             LPD  TYN++I G CR  ++D A++++E M   GC P+V  Y ++++G CK  ++ EA
Sbjct: 406 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            EV++ ++N     D +  +TLI+  C++ R+D+A +LL+EM+  G   D+V + I++ G
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C+  +++++L    ++   G      +Y IV++  C+   +     LL+ ML RG  P 
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPD 585

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLV-EMGFKPESDSWALLVELICRGRKLLFAFELL 507
                 ++  LCK+  + D A  L+ L+ + G  P   ++ +LV+ +C+  +L  A  LL
Sbjct: 586 AIVYTSVIDGLCKSD-SYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLL 644

Query: 508 D 508
           +
Sbjct: 645 E 645



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 208/407 (51%), Gaps = 18/407 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  TY T+++   +    +    +  QM   +C      +  L+  +      E
Sbjct: 264 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCK---QE 320

Query: 148 RVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQV----DLAQNFLKYSNQHLRLKPN 201
           R  +    +  + +   +P+    +T ++ L++S +     +LAQ  L+        KP+
Sbjct: 321 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD-----CKPS 375

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              FN++I   CK G L+ A+E+ + M   +   P++ TY+ +I G C+  R  +A +L 
Sbjct: 376 HFTFNLMIDMFCKVGQLDLAYELFQLMT-DRGCLPDIYTYNIMISGACRANRIDDARQLL 434

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           E M ++    PD +TYN ++ G C+  +VD A ++ E ++N G   +V   +TL++G CK
Sbjct: 435 ERM-TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 493

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             +L +A+++  EM+     PD + YT LI+ FC+A ++D++L    EM ++GC   ++T
Sbjct: 494 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 553

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++I++  LC+  ++ +   +L+ +   G+  +   Y  V++  C+    ++A EL +LM 
Sbjct: 554 YSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMK 613

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSW 487
             G  P   T N L+ +LCK     D AI L  ++E  G  P++ ++
Sbjct: 614 QTGCAPTVVTYNVLVDKLCKVSRL-DEAIHLLEVMESDGCLPDTVTY 659



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 208/416 (50%), Gaps = 10/416 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY  ++D   + ++ +    +L++M    C+ +   +  LM          + ++ F+  
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG---KYIDAFNLA 364

Query: 157 HPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
             + R   KPS    +  +++  +  Q+DLA    +       L P+   +NI+I   C+
Sbjct: 365 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCL-PDIYTYNIMISGACR 423

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
              ++ A ++L+ M ++    P+++TY++++ GLCK  +  EA E++E + +    L D 
Sbjct: 424 ANRIDDARQLLERMTEAGCP-PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL-DV 481

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +T + LIDG C+  ++D A+K++  M+ NG  P+V  YT L++GFCK  +L ++   F E
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M +    P  I Y+ +I+  C++ RV +   LLK M ERG   D + +  ++ GLC+   
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
            +EA  + + +   G      +Y ++++  C+   L++AI LL +M   G LP   T N 
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661

Query: 455 LLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
           +     K+    D A  LF  +   G  P    ++LL+  +    K+  A E+ +E
Sbjct: 662 VFDGFWKSA-EHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEE 716



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A++ F+    +        T N L+  F R  K   A  + +  +   C+P+   Y+TL
Sbjct: 114 KAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTL 173

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGFCK    Q+A  + DEM+   + P    Y T+I   C  GRVD AL   ++M +R C
Sbjct: 174 INGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNC 232

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
              ++T+ I++  LC+  +I +A  +LE +   G   N  +Y  ++N  C+ G +++A+ 
Sbjct: 233 APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV 292

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   ML     P   T N L+   CK    +D A  L  +V+ G +P   ++  L++ + 
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 352

Query: 496 RGRKLLFAFEL 506
           +  K + AF L
Sbjct: 353 KSGKYIDAFNL 363



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 99/179 (55%), Gaps = 2/179 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    ++I+I   CK   +     +LK M +  ++ P+ I Y+++IDGLCK+  + EA E
Sbjct: 549 PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT-PDAIVYTSVIDGLCKSDSYDEAYE 607

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L++ ++ +    P  +TYNVL+D  C+  ++D A  ++E M+++GC P+   Y ++ +GF
Sbjct: 608 LYK-LMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF 666

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            K  +  +A  +F  MK+    P    Y+ L+       ++D+A+E+ +E  E G   D
Sbjct: 667 WKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 10/227 (4%)

Query: 290 VDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           +D+A K  ++     G   + F    L++ F ++ K QEA ++F   +  L  PD+I Y+
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           TLIN FC+A    +A  LL EM++RG       +N I+ GLC  G+++ AL     + Y 
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-----VHYR 226

Query: 409 GIYLNKA----SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            +  N A    +Y I+++  C+   +  A  +L  M+  G  P+  T N L+   CK G 
Sbjct: 227 DMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 286

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            ++A +    ++E    P+  ++ +L++  C+  +     +LL E+V
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 238/495 (48%), Gaps = 62/495 (12%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT----- 122
           ++ C    Q ALE+F++VS +     N   Y+ I+  L   K +     ++R +      
Sbjct: 44  ILTCRTANQ-ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQN 102

Query: 123 ----------------YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSL 166
                            E+ KF   +F  L+  FS   L E  L +++K+  +    P++
Sbjct: 103 SRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL----PAM 158

Query: 167 KAISTCLNLLIESNQVDL-------------AQNFLKYSN------------QHLRLK-- 199
           +A +  L+ L++  + D              + N + Y              +  RL   
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218

Query: 200 -------PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                  P   I+ ILI+  C    +  A  + + M+ S M  PNL TY+T++DG CK  
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM-LPNLYTYNTMMDGYCKIA 277

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
             ++A+EL++EM+  D +LP+ +T+ +LIDG C+  ++  A+K +  M + G  PN+F Y
Sbjct: 278 HVKKALELYQEMLG-DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L++G+CK G L EA  +  E++   + PD   Y+ LI   C   R++EA  LL+EMK+
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK 396

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G   + VT+N ++ G C+EG +E+A+ +  ++   GI  N  ++  +++  C+ G++E 
Sbjct: 397 KGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+ L   M+ +G LP       L+    K G  ++A      + E G  P   + + L++
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLID 516

Query: 493 LICRGRKLLFAFELL 507
            +C+  ++  A +L 
Sbjct: 517 GLCKDGRISDAIKLF 531



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 16/226 (7%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +   G +  A  +  E+        NLI+++++I     N R  +A++LF +M   
Sbjct: 672 LISMYSATGNVADAHNMFDEIPSK-----NLISWTSVISAYVDNQRPNKALQLFRQM-QM 725

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D + PD +T  V +      G +D  + I  ++++ G + ++    +L+N + K G++  
Sbjct: 726 DDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGT 785

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCKADIVTFNIIL 386
           A+      +  L+ P+ + +  ++     AG V+E  +  + MKE    +  I  F  ++
Sbjct: 786 AR------RFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMV 839

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
             LCR G + EA   + K+    +  N   +R +L     +G  +K
Sbjct: 840 DLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMWDK 882



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 106/227 (46%), Gaps = 11/227 (4%)

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            K++   + N G  P +F  T+L++ +   G + +A  +FDE+ +     + I +T++I+
Sbjct: 650 GKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPS----KNLISWTSVIS 705

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            +    R ++AL+L ++M+    + DIVT  + L      G ++    +   + + G+  
Sbjct: 706 AYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDT 765

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +      ++N   + GE+  A    R  L    LP+  T   +L+    AG+ E+     
Sbjct: 766 DLCLNNSLINMYSKCGEIGTA---RRFSL---VLPNDVTFMGVLMACSHAGLVEEGKQHF 819

Query: 473 FGLVE-MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
             + E    +P    +  +V+L+CR   L  A+E + ++ ++ +  +
Sbjct: 820 RSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVV 866



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEA 328
           +LP+ +T+  ++      G V+  K+    MK +    P + ++  +++  C+ G L EA
Sbjct: 792 VLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA 851

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER---GCKADIVTFNI 384
            E   +M    ++P+ + + TL+      G  D+ + +  ++K+R   GC +  V  +I
Sbjct: 852 YEFILKMP---VRPNAVVWRTLLGACSLQGMWDKKMLVRNQIKQRRDPGCSSIEVGIDI 907


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 217/426 (50%), Gaps = 6/426 (1%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-TCKFHEGIFL 134
            CA  +   +  + G   N  T+ T+L  L    K      + +++  E  C+ +E ++ 
Sbjct: 114 DCAFSVL-PIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYG 172

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            +M   S     E+ L +  +I      KP ++  S  ++ L +   +D A N L    Q
Sbjct: 173 TVMNGLSKRGHTEKTLSLL-RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQ 231

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + PN   +N LI   CK G  E    +L EM    ++ PN+ T+S LIDGLCK G+ 
Sbjct: 232 K-NIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNIN-PNVHTFSILIDGLCKEGKV 289

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A E+   M+ K  + PD +TY+ ++DG+C  G+VDRA+++   +++ G  PN+F+Y+ 
Sbjct: 290 EDADEVMRHMIEKG-VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK+  L +A ++F E+    LKPDT+ Y+T+++     GR+ +A ++  EM   G
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI   + +L G  + G +EEA+ +  KL  +    N + Y +V+N  C+   + +A 
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAH 468

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +   +   G +P   T N ++   C+ G+ ++    L  + + G    + ++ ++++  
Sbjct: 469 AIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528

Query: 495 CRGRKL 500
            R  K+
Sbjct: 529 FRSNKI 534



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 172/310 (55%), Gaps = 5/310 (1%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           I NI+   +C R  ++ AF VL    K+ + + N++T++TL+ GL    +  +A+ LF++
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPF-NVVTFNTLLGGLFAENKVTDAVVLFKK 157

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           +V +    P+ + Y  +++G  + G  ++   ++  M+     P+V  Y+ +++  CK+ 
Sbjct: 158 LVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDI 217

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            L  A  + +EMK   + P+   Y +LI+  C+ G+ ++   LL EM       ++ TF+
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++ GLC+EGK+E+A  ++  +   G+  +  +Y  +++  C +G++++A  +  ++  +
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK 337

Query: 444 GFLPHYATSNELLVRLC-KAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLL 501
           G  P+  + + L+   C K  +A+  A+ LFG + + G KP++ +++ ++  +    ++ 
Sbjct: 338 GIKPNIFSYSILINGYCKKKNLAK--AMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIG 395

Query: 502 FAFELLDELV 511
            A ++ DE++
Sbjct: 396 DAKKIFDEML 405



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 127/296 (42%), Gaps = 36/296 (12%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ A  +   M + +   P++I +S L   +     +   + LF EM      + D++  
Sbjct: 43  LDDAVSLFHRMVRMK-PLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSI-L 100

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N++ + +C   ++D A  ++      G   NV  + TL+ G   E K+ +A  +F ++  
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL-- 158

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
                                           ++E+ C+ + V +  ++ GL + G  E+
Sbjct: 159 --------------------------------VREKICEPNEVMYGTVMNGLSKRGHTEK 186

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
            L +L  +       +  +Y IV++  C+   L+ AI LL  M  +   P+  T N L+ 
Sbjct: 187 TLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLID 246

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            LCK G  E     L  +V +   P   ++++L++ +C+  K+  A E++  ++ K
Sbjct: 247 GLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEK 302


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 230/439 (52%), Gaps = 17/439 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE---GIFL 134
           A+ + + + E K +  N  T  T+++ L    +      ++ +M    C+ +E   G  L
Sbjct: 158 AVALVDRMVEMK-YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVL 216

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYS 192
           N M    N +L    L++F K+     E+ S+KA     +++I+S     +L      ++
Sbjct: 217 NRMCKSGNTAL---ALDLFRKM-----EERSIKASVVQYSIVIDSLCKDGNLDDALSLFN 268

Query: 193 NQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
              ++ +K +   ++ +I   C  G  +   ++L+EM    +  PN++T+S LID   K 
Sbjct: 269 EMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNI-IPNVVTFSALIDVFVKE 327

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+  EA EL+ EMV++  I PD +TY+ LIDGFC+  ++  A ++++ M + GC PN+  
Sbjct: 328 GKLLEAKELYNEMVARG-IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVT 386

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+ L+N +CK  ++     +F E+ +  L  DT+ Y TL+  FC++G+++ A EL +EM 
Sbjct: 387 YSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMV 446

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
            RG    +VT+ I+L GLC  G++++AL + EK+    + L    Y I+++  C   +++
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVD 506

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A  L   +  +G  P   T N ++  LCK G   +A +    + E G  P   ++ +L+
Sbjct: 507 DAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566

Query: 492 ELICRGRKLLFAFELLDEL 510
                G  ++ + EL++E+
Sbjct: 567 RAHLGGSGVISSVELIEEM 585



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 208/402 (51%), Gaps = 9/402 (2%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  ++ +        AL++F  + E++    +   Y+ ++D L +    +   ++  
Sbjct: 210 ITYGPVLNRMCKSGNTALALDLFRKM-EERSIKASVVQYSIVIDSLCKDGNLDDALSLFN 268

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK-PSLKAISTCLNLLIE 178
           +M  +  K     + +++    N    +   +M  ++  I R   P++   S  +++ ++
Sbjct: 269 EMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREM--IGRNIIPNVVTFSALIDVFVK 326

Query: 179 SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
             ++  A+    Y+    R + P+T  ++ LI   CK   L  A ++L ++  S+   PN
Sbjct: 327 EGKLLEAKEL--YNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML-DLMVSKGCEPN 383

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++TYS LI+  CK  R    + LF E+ SK  ++ D +TYN L+ GFC+ GK++ AK++ 
Sbjct: 384 IVTYSILINSYCKAKRVDNGMRLFCEISSKG-LVADTVTYNTLVQGFCQSGKLNVAKELF 442

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M + G  P+V  Y  L++G C  G+LQ+A E+F++M+   +      Y  +I+  C A
Sbjct: 443 QEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNA 502

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            +VD+A  L   +  +G K D++T+N+++GGLC++G + EA  +  K+  DG   +  +Y
Sbjct: 503 SKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTY 562

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            I++        +  ++EL+  M  RGF    +T   ++V L
Sbjct: 563 NILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML 604



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 162/314 (51%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F+ L     +R   +      KEM  + + + N+ T + +I+  C+  +   A  
Sbjct: 67  PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEH-NMYTMNIMINCFCRKRKLLFAFS 125

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +    + K    P+ +T++ LI+GFC  G+V  A  +++ M      PNV    TL+NG 
Sbjct: 126 VVGRAL-KFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGL 184

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C +G++ EA  + D M  +  + + I Y  ++N  C++G    AL+L ++M+ER  KA +
Sbjct: 185 CLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASV 244

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V ++I++  LC++G +++AL +  ++   GI  +  +Y  ++   C  G  +   ++LR 
Sbjct: 245 VQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLRE 304

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ R  +P+  T + L+    K G   +A      +V  G  P++ +++ L++  C+  +
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENR 364

Query: 500 LLFAFELLDELVIK 513
           L  A ++LD +V K
Sbjct: 365 LGEANQMLDLMVSK 378



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 178/363 (49%), Gaps = 20/363 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +FN + E KG   +   Y++I+  L    +++    +LR+M       +   F  L+
Sbjct: 263 ALSLFNEM-EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
             F          E+++++  + R   P     S+ ++   + N+       L  +NQ L
Sbjct: 322 DVFVKEGKLLEAKELYNEM--VARGIAPDTITYSSLIDGFCKENR-------LGEANQML 372

Query: 197 RL------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            L      +PN   ++ILI  +CK   +++   +  E+  S+    + +TY+TL+ G C+
Sbjct: 373 DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS-SKGLVADTVTYNTLVQGFCQ 431

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           +G+   A ELF+EMVS+  + P  +TY +L+DG C  G++ +A +I E M+ +     + 
Sbjct: 432 SGKLNVAKELFQEMVSRG-VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIG 490

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y  +++G C   K+ +A  +F  +    +KPD + Y  +I   C+ G + EA  L ++M
Sbjct: 491 IYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKM 550

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           KE GC     T+NI++        +  ++ ++E++   G   + ++ ++V+      G L
Sbjct: 551 KEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV-VMLSDGRL 609

Query: 431 EKA 433
           +K 
Sbjct: 610 DKT 612



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 138/260 (53%), Gaps = 3/260 (1%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EAI+LFE M+ + + LP  + ++ L     R  + D      + M  NG   N++  
Sbjct: 49  KVNEAIDLFESMI-QSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTM 107

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             ++N FC++ KL  A  V      F  +P+TI ++TLIN FC  GRV EA+ L+  M E
Sbjct: 108 NIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVE 167

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              + ++VT N ++ GLC +G++ EAL +++++   G   N+ +Y  VLN  C+ G    
Sbjct: 168 MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLV 491
           A++L R M  R         + ++  LCK G  +D A++LF  +EM G K +  +++ ++
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDD-ALSLFNEMEMKGIKADVVAYSSII 286

Query: 492 ELICRGRKLLFAFELLDELV 511
             +C   +     ++L E++
Sbjct: 287 GGLCNDGRWDDGAKMLREMI 306


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 224/431 (51%), Gaps = 4/431 (0%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           + E   + +IF +  +   +   +AT+  +++  A  ++F  +  VL +M  E     E 
Sbjct: 66  QNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTET 125

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-- 189
           IF+ + K      L    +  FH++      K ++K+ ++ LN++I+      A  F   
Sbjct: 126 IFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLH 185

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
            +       +PN   +N++IK  CK G ++ A +  +EM     + P++ TYSTL++GLC
Sbjct: 186 VFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCN-PDVFTYSTLMNGLC 244

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K  R  EA+ L +EM   +  LP+ +T+NVLID   + G + RA K+++ M   GC PN 
Sbjct: 245 KERRVDEAVFLLDEM-QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 303

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y TL++G C +GKL +A  + ++M +    P+ + Y T+IN   +  R ++ + +L  
Sbjct: 304 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 363

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M+ERG KA+   ++ ++ GL +EGK E A+ + +++   G   N   Y   ++  C+  +
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            ++A ++L+ ML +GFLP+  T + L+    K G ++ A +    ++    +      ++
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483

Query: 490 LVELICRGRKL 500
           L+  +C   +L
Sbjct: 484 LLNGLCESGRL 494



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 209/449 (46%), Gaps = 31/449 (6%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           L +F   S  KGF  N  TY  I+  L +  + +      R+M  + C      +  LM 
Sbjct: 184 LHVFGANS--KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMN 241

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE--SNQVDLAQNFLKYSNQHL 196
                    RV E    +  +  E      ++   N+LI+  S   DL++      N  L
Sbjct: 242 GLCK---ERRVDEAVFLLDEMQAEGCLPNPVT--FNVLIDALSKNGDLSRAAKLVDNMFL 296

Query: 197 R-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +   PN   +N LI   C +G L+ A  +L++M  S+   PN +TY T+I+GL K  R  
Sbjct: 297 KGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK-CVPNQVTYGTIINGLVKQRRAE 355

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           + + +   M  + Q   +   Y+ LI G  + GK + A ++ + M   GC PNV  Y   
Sbjct: 356 DGVHILMSMEERGQK-ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAF 414

Query: 316 MNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           ++G C++ K  EA+++  EM  K FL  P+   Y++L+  F + G   +A+ + KEM  +
Sbjct: 415 IDGLCRDEKPDEAEDILQEMLSKGFL--PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ 472

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
             + ++V  +++L GLC  G++ EAL +   +  +G+  +  +Y  ++   C  G ++K 
Sbjct: 473 DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKG 532

Query: 434 IELLRLMLCR--GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           ++L   M C+     P   T N L   LC+      A   L  +++ G  P+S +  + +
Sbjct: 533 LKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL 592

Query: 492 ELICR-------GRKLLFAFELLDELVIK 513
           E +         GR  LF    LDELV++
Sbjct: 593 ETLRERINPPQDGR--LF----LDELVVR 615



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 156/310 (50%), Gaps = 3/310 (0%)

Query: 207 ILIKHHCKRGTLES-AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           ILI   C +  L   A      M         + +++++++ + + G F  A + +  + 
Sbjct: 128 ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 187

Query: 266 SKDQ--ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
             +     P+ LTYN++I   C+ G++DRA      M    CNP+VF Y+TLMNG CKE 
Sbjct: 188 GANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKER 247

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++ EA  + DEM+     P+ + +  LI+   + G +  A +L+  M  +GC  + VT+N
Sbjct: 248 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 307

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC +GK+++AL +LEK+       N+ +Y  ++N   ++   E  + +L  M  R
Sbjct: 308 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEER 367

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G   +    + L+  L K G +E+A      + E G KP    +   ++ +CR  K   A
Sbjct: 368 GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEA 427

Query: 504 FELLDELVIK 513
            ++L E++ K
Sbjct: 428 EDILQEMLSK 437


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 220/437 (50%), Gaps = 11/437 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++ N+ S  +G      TY  IL  L +  K++    VL +M       +   +  L+
Sbjct: 311 AFQLLNSFS-SRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSN-Q 194
                    + +LE       ++R    P L + S+ + +L  +    L Q  + +   +
Sbjct: 370 VEICR---RDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH--LYQALMHFREME 424

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + P+  I+ ILI   C+ G L  A ++  EM  ++  + +++TY+T ++GLCK   F
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML-ARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  LF EMV +  + PD  T+  LI G+C+ G +D+A  + E M      P+   Y T
Sbjct: 484 ADADMLFNEMVERGMV-PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++GFCK G++  AKE++D+M    + PD I Y T++N FC +G + EAL L  +M E+G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + ++VT N ++ G CR G + +A   L K+  +GI  +  SY  +++   ++  LEKA 
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L+  M  RG   +  T N +L   C  G  ++A   L  ++E+G  P+  +++ L+   
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722

Query: 495 CRGRKLLFAFELLDELV 511
                +  AF   DE++
Sbjct: 723 VSQDNMKEAFRFHDEML 739



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 228/462 (49%), Gaps = 24/462 (5%)

Query: 63  GAAISLIKCEK---------EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           G ++S+  C K             A EI+  V  + G   N  T   +++ L + +KFE 
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV-RGGIELNVYTLNIMVNALCKDRKFEN 275

Query: 114 VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER---VLEMFHKIHPITRE--KPSLKA 168
           V   L  M        +G+F +++ + +  + + R   V E F  ++  +    +P L  
Sbjct: 276 VMFFLSDME------GKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLT 329

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +  L  L +  + D A++ L    Q L L PN   +N L+   C+R  +  A E+  EM
Sbjct: 330 YNAILYGLCKIGKYDRAKDVLIEMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
            +  +  P+L+++S+LI  L +NG   +A+  F EM  +  I+PD + Y +LIDGFCR G
Sbjct: 389 SRRGV-LPDLVSFSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYTILIDGFCRNG 446

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            +  A K+ + M   GC  +V  Y T +NG CK+    +A  +F+EM    + PD   +T
Sbjct: 447 ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFT 506

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           TLI  +C+ G +D+AL L + M     K D VT+N ++ G C+ G++  A  + + +   
Sbjct: 507 TLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            I  +  SY  VLN  C  G L +A+ L   ML +G  P+  T N L+   C++G    A
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              L  ++  G  P+S S+  L++   +   L  AF L++E+
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 222/467 (47%), Gaps = 26/467 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQ-KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           L +C  +    L+    VS     F H++ + + ++  L R ++     A + +M  ++ 
Sbjct: 107 LFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSG 166

Query: 127 KFHEGIFLNLMK---HFSNCSL----------HERVLEMFHKIHPITREKPSLKAISTC- 172
                +  +L+    +F +  L            + L    +   I R K    +I+ C 
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACN 226

Query: 173 --LNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
             L  L+ +  VDLA        + +R  ++ N    NI++   CK    E+    L +M
Sbjct: 227 KLLGGLVRTGWVDLAWEIY---GEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM 283

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           +   + + +++TY+TLI+  C+ G   EA +L     S+  + P  LTYN ++ G C+ G
Sbjct: 284 EGKGV-FADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG-MEPGLLTYNAILYGLCKIG 341

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K DRAK ++  M   G  PN   Y TL+   C+   + EA+E+FDEM    + PD + ++
Sbjct: 342 KYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFS 401

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           +LI    R G + +AL   +EM+  G   D V + I++ G CR G + +AL M +++   
Sbjct: 402 SLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR 461

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G +++  +Y   LN  C+K     A  L   M+ RG +P + T   L+   CK G   D 
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG-NMDK 520

Query: 469 AIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           A+ LF  +V    KP+  ++  L++  C+  ++  A EL D+++ K+
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 147/248 (59%), Gaps = 2/248 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F  LI+ +CK G ++ A  + + M ++ +  P+ +TY+TLIDG CK G    A E
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK-PDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+++M+ KD I+PD ++Y  +++GFC  G +  A  + + M   G  PN+    TL+ G+
Sbjct: 559 LWDDMIRKD-IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G + +A E   +M +  + PD+  Y TLI+ + +   +++A  L+ EM++RG + +I
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNI 677

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N+IL G C EGK++EA  +L K+   GI  + A+Y  ++N    +  +++A      
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDE 737

Query: 440 MLCRGFLP 447
           ML RG +P
Sbjct: 738 MLQRGLVP 745



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI  +C+ G +E AF++L       M  P L+TY+ ++ GLCK G++  A ++  EM
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGME-PGLLTYNAILYGLCKIGKYDRAKDVLIEM 353

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +    + P+A TYN L+   CR   +  A++I + M   G  P++ ++++L+    + G 
Sbjct: 354 LQLG-LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F EM+   + PD + YT LI+ FCR G + +AL++  EM  RGC  D+VT+N 
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            L GLC++    +A  +  ++   G+  +  ++  ++   C+ G ++KA+ L   M+   
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N L+   CKAG    A      ++     P+  S+  ++   C    L  A 
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592

Query: 505 ELLDELVIK 513
            L D+++ K
Sbjct: 593 NLCDQMLEK 601



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 139/285 (48%), Gaps = 8/285 (2%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY T L+ L + K F   D +  +M           F  L++ +      ++ L +F  
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHC 213
           +   T  KP     +T ++   ++ ++  A+      +  +R  + P+   +  ++   C
Sbjct: 528 MVR-TNLKPDKVTYNTLIDGFCKAGEMGRAKELW---DDMIRKDIIPDHISYGTVLNGFC 583

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
             G L  A  +  +M +  +  PNL+T +TLI G C++G   +A E   +M+S + I+PD
Sbjct: 584 SSGLLPEALNLCDQMLEKGIR-PNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS-NGIIPD 641

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           + +YN LIDG+ +   +++A  ++  M+  G   N+  Y  ++NGFC EGK+QEA++V  
Sbjct: 642 SFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLR 701

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +M    + PD   Y++LIN       + EA     EM +RG   D
Sbjct: 702 KMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 230/444 (51%), Gaps = 10/444 (2%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           + + + AL+ F     Q  + H+   Y  +LD L++ K  +    VLR M     +    
Sbjct: 60  QSDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQ 119

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            F  +M  +S        +++   +     E P+L   +T +++L+ +N ++ A  FL+ 
Sbjct: 120 DFCCVMVSYSRAGKLRNAMQVLTMMQKAGIE-PNLLVCNTAIHVLVMANMLEKALRFLE- 177

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             Q L + PN   +N LIK +C    +E A E++ EM     S P+ ++Y T++  LCKN
Sbjct: 178 RMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCS-PDKVSYYTVMGFLCKN 236

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R RE +++ E+M    ++L D +TYN LI   C+    D A + +   +  G   +   
Sbjct: 237 RRIREVMDVIEKM-EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVG 295

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+ +++ +CKEG++ +AKE+ +EM      PD + YT +IN F +AG V +A ++L++M 
Sbjct: 296 YSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMY 355

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGML---EKLWYDGIYLNKASYRIVLNFSCQKG 428
           + GCK + V++   L GLC++G   EA  M+   E+ W+     N  +Y +V++   ++G
Sbjct: 356 KHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTP---NAITYSVVMHGFRREG 412

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +L  A +++R M+ +GF P     N LL  LC+ G  ++A   +   + MG    + ++ 
Sbjct: 413 KLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFT 472

Query: 489 LLVELICRGRKLLFAFELLDELVI 512
            ++   C+   +  A  LLD++ +
Sbjct: 473 TVIHRFCQQDDIEAALSLLDDMYL 496



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 191/374 (51%), Gaps = 6/374 (1%)

Query: 143 CSLH--ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
           C LH  E  +E+  ++ P+    P   +  T +  L ++ ++    + ++   +  +L  
Sbjct: 199 CDLHRVEDAMELISEM-PLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIE-KMEDTKLLA 256

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +N LI   CK    + A + L+E +K        + YS ++D  CK GR  +A E+
Sbjct: 257 DQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDK-VGYSAIVDSYCKEGRMDQAKEI 315

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             EM ++  I PD +TY  +I+GF + G+V +A+K+++ M  +GC PN  +YT  + G C
Sbjct: 316 VNEMFTRGCI-PDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLC 374

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++G   EA+E+    +     P+ I Y+ +++ F R G++ +A ++++EM  +G     V
Sbjct: 375 QKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPV 434

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
             N++L  LCR G+++EA   +E+    G  +N  ++  V++  CQ+ ++E A+ LL  M
Sbjct: 435 EINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDM 494

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                 P   T   ++  L K G  E+A      +++ G  P   ++  ++    +  ++
Sbjct: 495 YLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRV 554

Query: 501 LFAFELLDELVIKE 514
                LLD+++ ++
Sbjct: 555 EDLLNLLDKMLTRQ 568



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 169/309 (54%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F  ++  + + G L +A +VL  M+K+ +  PNL+  +T I  L       +A+   E M
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIE-PNLLVCNTAIHVLVMANMLEKALRFLERM 179

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
                I+P+ +TYN LI G+C   +V+ A +++  M   GC+P+  +Y T+M   CK  +
Sbjct: 180 -QLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRR 238

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++E  +V ++M++  L  D + Y TLI+  C+    DEAL+ L+E ++RG + D V ++ 
Sbjct: 239 IREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSA 298

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           I+   C+EG++++A  ++ +++  G   +  +Y  ++N   Q GE+ +A ++L+ M   G
Sbjct: 299 IVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHG 358

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+  +    L  LC+ G + +A   +    E  + P + ++++++    R  KL  A 
Sbjct: 359 CKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDAC 418

Query: 505 ELLDELVIK 513
           +++ E++ K
Sbjct: 419 DVVREMIGK 427



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 160/349 (45%), Gaps = 36/349 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +  +N   ++ +V  A+  L+   +H   KPNT  +   +K  C++G    A E
Sbjct: 326 PDVVTYTAIINGFSQAGEVGQARKMLQQMYKH-GCKPNTVSYTAFLKGLCQKGNSSEARE 384

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++K   + Q   PN ITYS ++ G  + G+  +A ++  EM+ K    P  +  N+L+  
Sbjct: 385 MMKA-SEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKG-FFPTPVEINLLLQS 442

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            CR G+VD AKK ME   N GC  N  N+TT+++ FC++  ++ A  + D+M      PD
Sbjct: 443 LCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPD 502

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT---------------------- 381
            + YTT+I+   + GR++EA EL  +M ++G     VT                      
Sbjct: 503 AVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLD 562

Query: 382 -----------FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
                      FN ++  LC  G +E A  +L K+      ++  +  +++    +KG  
Sbjct: 563 KMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIP 622

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
             A ++   M  R  +P      ++  +L + G +E+A       VE G
Sbjct: 623 LSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERG 671


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 197/348 (56%), Gaps = 3/348 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS+ A +  L L +    +  A+ FL    +H  + PN   +NIL++  C RG LE A  
Sbjct: 116 PSVPAYNAVL-LALSDASLPSARRFLSSMLRH-GVAPNVYTYNILVRALCARGRLEEAVG 173

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V+ +M+ +  + PN +TY+TL+   C+ G    A  +   M  +    P+ +T+N +++G
Sbjct: 174 VVGDMRGAGCA-PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G+++ A+K+ + M   G  P+V +Y TL++G+CK G L E+  VF EM    L PD
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + +T+LI+  C+AG +++A+ L+ +M+ERG + + VTF  ++ G C++G +++AL  +E
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   GI  +   Y  ++N  C+ G ++ A EL+R M  +   P   T + ++   CK G
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             + A      +++ G  P++ +++ L+  +C  ++L  A EL + ++
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 217/410 (52%), Gaps = 15/410 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  TY  ++  L    + E    V+  M    C  +   +  L+  F  C   E
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF--CRAGE 202

Query: 148 RVLEMFHKIHPITRE----KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPN 201
             L+   ++  + RE    KP+L   ++ +N L ++ +++ A+   K  ++ +R  L P+
Sbjct: 203 --LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR---KVFDEMVREGLAPD 257

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N L+  +CK G L  +  V  EM +  +  P+++T+++LI   CK G   +A+ L 
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL-VPDVVTFTSLIHATCKAGNLEQAVALV 316

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            +M  +   + + +T+  LIDGFC+ G +D A   +E M+  G  P+V  Y  L+NG+CK
Sbjct: 317 AQMRERGLRM-NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G++  A+E+  EM+   +KPD + Y+T+I+ +C+ G +D A +L ++M ++G   D +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ ++ GLC E ++ +A  + E +   G+  ++ +Y  +++  C++G +EKA+ L   M+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            +G LP   T + L+  L K+   ++A   LF L      P++  +  L+
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 163/298 (54%), Gaps = 25/298 (8%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+   +N LI  +CK G ++ A E+++EM+  ++  P+++TYST+I G CK G    A
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK-PDVVTYSTIISGYCKVGNLDSA 417

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L ++M+ K  +LPDA+TY+ LI G C   +++ A ++ E M   G  P+ F YTTL++
Sbjct: 418 FQLNQKMLKKG-VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG--- 374
           G CKEG +++A  + DEM    + PD + Y+ LIN   ++ R  EA  LL ++       
Sbjct: 477 GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVP 536

Query: 375 ------------CKADIVTFNIILGGLCREGKIEEA----LGMLEKLWYDGIYLNKASYR 418
                        KA+  +   +L G C +G ++EA      ML++ W     L+ + Y 
Sbjct: 537 DNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW----KLDGSVYS 592

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           I+++  C+ G + KA+   + ML  GF P+  ++  L+  L + GM  +A  A+  L+
Sbjct: 593 ILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 177/354 (50%), Gaps = 20/354 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           +L +F+ ++ Q+G   +  T+ +++    +    E   A++ QM     + +E  F  L+
Sbjct: 277 SLAVFSEMT-QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F      +  L    ++     + PS+   +  +N   +  ++DLA+  ++   +  R
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQ-PSVVCYNALINGYCKLGRMDLARELIR-EMEAKR 393

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+   ++ +I  +CK G L+SAF++ ++M K  +  P+ ITYS+LI GLC+  R  +A
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV-LPDAITYSSLIRGLCEEKRLNDA 452

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELFE M+ +  + PD  TY  LIDG C+ G V++A  + + M   G  P+V  Y+ L+N
Sbjct: 453 CELFENML-QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 511

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC---------------FCRAGRVDE 362
           G  K  + +EA  +  ++ +    PD I Y  L+ C               FC  G + E
Sbjct: 512 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 571

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           A ++ + M +R  K D   ++I++ G CR G + +AL   +++   G   N  S
Sbjct: 572 ADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 180/309 (58%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI   CK G  ++A E+L+     ++  P+++ Y+T+IDG+CK+    +A +L+ E 
Sbjct: 301 YGTLINGLCKVGETKAALELLRR-NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEK 359

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSK +I PD  TYN LI GFC  GK+  A  +   M +    P+V+ ++ L++GFCK+G 
Sbjct: 360 VSK-RIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGN 418

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++EAK V   M    +KPD + Y++L++ +C    V++A  +   M  RG  A++ ++NI
Sbjct: 419 IKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNI 478

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+   ++EA+ + +++ +  I+ +  +Y  +++  C+ G +  A+EL+  M  RG
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N +L  LCK    + A   L  L   G +P+ +++ +LV+ +C+  KL  A 
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598

Query: 505 ELLDELVIK 513
           ++ ++L++K
Sbjct: 599 KVFEDLLVK 607



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 210/404 (51%), Gaps = 46/404 (11%)

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            H++V+ M   +  ++          T +N L +  +   A   L+ ++  L ++P+  +
Sbjct: 285 FHDKVIAMGFHLDQVSY--------GTLINGLCKVGETKAALELLRRNDGKL-VQPDVVM 335

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N +I   CK   +  AF++  E K S+  +P++ TY+ LI G C  G+ ++AI+LF +M
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLYSE-KVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM-------- 316
            SK+ I+PD  T+++L+DGFC+ G +  AK ++  M      P+V  Y++LM        
Sbjct: 395 TSKN-IIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453

Query: 317 ---------------------------NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
                                      NGFCK   + EA ++F EM +  + PD I Y++
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI+  C++GR+  ALEL+ EM  RG + DI+T+N IL  LC++  +++A+ +L KL   G
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I  +  +Y I++   CQ G+LE A ++   +L +G+         ++   C  G+ ++A 
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             L  + E G  P++ ++ +++  +    +   A +LL E++++
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 222/452 (49%), Gaps = 26/452 (5%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVL 118
           +S+G  I+ +    E + ALE+    ++ K    +   Y TI+D + + K   +A D   
Sbjct: 299 VSYGTLINGLCKVGETKAALELLRR-NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYS 357

Query: 119 RQMTYETCKFHEGIFLN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
            +++     F +    N L+  F      +  +++F+K+       P +   S  ++   
Sbjct: 358 EKVSKRI--FPDVFTYNALISGFCIVGKLKDAIDLFNKMTS-KNIIPDVYTFSILVDGFC 414

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +   +  A+N L    +   +KP+   ++ L+  +C    +  A  +   M    ++  N
Sbjct: 415 KDGNIKEAKNVLAMMMKQ-SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVT-AN 472

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + +Y+ +I+G CK     EA++LF+EM  K QI PD +TY+ LIDG C+ G++  A +++
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHK-QIFPDVITYSSLIDGLCKSGRISYALELV 531

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   G  P++  Y ++++  CK+  + +A  +  ++K   ++PD   YT L+   C++
Sbjct: 532 DEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQS 591

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G++++A ++ +++  +G   D+  + +++ G C +G  +EAL +L K+  +G   +  +Y
Sbjct: 592 GKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTY 651

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I++    +K E + A +LLR M+ RG L   A +++L+  +               LV 
Sbjct: 652 EIIILSLFEKDENDMAEKLLREMIMRGLL--VALTDDLVASI---------------LVR 694

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDE 509
             +      W   + L+ R  +L   F++ DE
Sbjct: 695 RTWCARLALWVTFISLLLRVIELKPGFDISDE 726



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 42/316 (13%)

Query: 234 SYPNLITY-STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           S+  LI Y  T I   C    F  +IE     + K+   PD +T    I GFC  G++ +
Sbjct: 222 SFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQ 281

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT--- 349
           A    + +   G + +  +Y TL+NG CK G+ + A E+       L++PD + Y T   
Sbjct: 282 ALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIID 341

Query: 350 --------------------------------LINCFCRAGRVDEALELLKEMKERGCKA 377
                                           LI+ FC  G++ +A++L  +M  +    
Sbjct: 342 GMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIP 401

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ TF+I++ G C++G I+EA  +L  +    I  +  +Y  +++  C   E+ KA  + 
Sbjct: 402 DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIF 461

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK---PESDSWALLVELI 494
             M  RG   +  + N ++   CK  M  D A+ LF   EM  K   P+  +++ L++ +
Sbjct: 462 NTMSHRGVTANVQSYNIMINGFCKIKMV-DEAMKLFK--EMHHKQIFPDVITYSSLIDGL 518

Query: 495 CRGRKLLFAFELLDEL 510
           C+  ++ +A EL+DE+
Sbjct: 519 CKSGRISYALELVDEM 534


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 225/431 (52%), Gaps = 4/431 (0%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           + E   + +IF +  +   +   +AT+  +++  A  ++F  +  VL +M  E     E 
Sbjct: 42  QNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTET 101

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-- 189
           IF+ + K      L    +  FH++      K ++K+ ++ LN++I+      A  F   
Sbjct: 102 IFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLH 161

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
            +       +PN   +N++IK  CK G ++ A +  +EM     + P++ TYSTL++GLC
Sbjct: 162 VFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCN-PDVFTYSTLMNGLC 220

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K  R  EA+ L +EM + +  LP+ +T+NVLID   + G + RA K+++ M   GC PN 
Sbjct: 221 KERRVDEAVFLLDEMQA-EGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 279

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y TL++G C +GKL +A  + ++M +    P+ + Y T+IN   +  R ++ + +L  
Sbjct: 280 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 339

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M+ERG KA+   ++ ++ GL +EGK E A+ + +++   G   N   Y   ++  C+  +
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            ++A ++L+ ML +GFLP+  T + L+    K G ++ A +    ++    +      ++
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459

Query: 490 LVELICRGRKL 500
           L+  +C   +L
Sbjct: 460 LLNGLCESGRL 470



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 209/449 (46%), Gaps = 31/449 (6%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           L +F   S  KGF  N  TY  I+  L +  + +      R+M  + C      +  LM 
Sbjct: 160 LHVFGANS--KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMN 217

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE--SNQVDLAQNFLKYSNQHL 196
                    RV E    +  +  E      ++   N+LI+  S   DL++      N  L
Sbjct: 218 GLCK---ERRVDEAVFLLDEMQAEGCLPNPVT--FNVLIDALSKNGDLSRAAKLVDNMFL 272

Query: 197 R-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +   PN   +N LI   C +G L+ A  +L++M  S+   PN +TY T+I+GL K  R  
Sbjct: 273 KGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK-CVPNQVTYGTIINGLVKQRRAE 331

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           + + +   M  + Q   +   Y+ LI G  + GK + A ++ + M   GC PNV  Y   
Sbjct: 332 DGVHILMSMEERGQK-ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAF 390

Query: 316 MNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           ++G C++ K  EA+++  EM  K FL  P+   Y++L+  F + G   +A+ + KEM  +
Sbjct: 391 IDGLCRDEKPDEAEDILQEMLSKGFL--PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ 448

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
             + ++V  +++L GLC  G++ EAL +   +  +G+  +  +Y  ++   C  G ++K 
Sbjct: 449 DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKG 508

Query: 434 IELLRLMLCR--GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           ++L   M C+     P   T N L   LC+      A   L  +++ G  P+S +  + +
Sbjct: 509 LKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL 568

Query: 492 ELICR-------GRKLLFAFELLDELVIK 513
           E +         GR  LF    LDELV++
Sbjct: 569 ETLRERINPPQDGR--LF----LDELVVR 591



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 156/310 (50%), Gaps = 3/310 (0%)

Query: 207 ILIKHHCKRGTLES-AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           ILI   C +  L   A      M         + +++++++ + + G F  A + +  + 
Sbjct: 104 ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 163

Query: 266 SKDQ--ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
             +     P+ LTYN++I   C+ G++DRA      M    CNP+VF Y+TLMNG CKE 
Sbjct: 164 GANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKER 223

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++ EA  + DEM+     P+ + +  LI+   + G +  A +L+  M  +GC  + VT+N
Sbjct: 224 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 283

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC +GK+++AL +LEK+       N+ +Y  ++N   ++   E  + +L  M  R
Sbjct: 284 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEER 343

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G   +    + L+  L K G +E+A      + E G KP    +   ++ +CR  K   A
Sbjct: 344 GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEA 403

Query: 504 FELLDELVIK 513
            ++L E++ K
Sbjct: 404 EDILQEMLSK 413


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 224/448 (50%), Gaps = 23/448 (5%)

Query: 83  NTVSEQKGFNH---------NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           + VSE   F H         N  T+ T+++ L R  +     A+L +M  +  +  +  +
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             ++            L +  K+  ++   P++   S  ++ L +  +   AQN      
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT-EM 281

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q   + P+   +N +I   C  G    A ++L+EM + ++S P+++TY+ LI+   K G+
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS-PDVVTYNALINAFVKEGK 340

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F EA EL++EM+ +  I+P+ +TYN +IDGFC+  ++D A+ +   M   GC+P+VF +T
Sbjct: 341 FFEAAELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 399

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL++G+C   ++ +  E+  EM    L  +T+ Y TLI+ FC  G ++ AL+L ++M   
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 459

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLW-----------YDGIYLNKASYRIVLN 422
           G   DIVT N +L GLC  GK+++AL M + +            ++G+  +  +Y I++ 
Sbjct: 460 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
               +G+  +A EL   M  RG +P   T + ++  LCK    ++A      +    F P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 579

Query: 483 ESDSWALLVELICRGRKLLFAFELLDEL 510
              ++  L+   C+  ++    EL  E+
Sbjct: 580 NVVTFNTLINGYCKAGRVDDGLELFCEM 607



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 217/444 (48%), Gaps = 20/444 (4%)

Query: 70  KCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
            C K P  AL  F  ++ + G + +  T+ T+L  L    +         QM   TC+ +
Sbjct: 126 SCSKLP-FALSTFGKIT-KLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQN 187
              F  LM          R++E    +  +  +  +P+     T ++ + +      A N
Sbjct: 184 VVTFTTLMNGLCR---EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            L+   +   + PN  I++ +I   CK G    A  +  EM++  + +P+L TY+++I G
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVG 299

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C +GR+ +A +L +EM+ + +I PD +TYN LI+ F + GK   A ++ + M   G  P
Sbjct: 300 FCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 358

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N   Y ++++GFCK+ +L  A+++F  M      PD   +TTLI+ +C A R+D+ +ELL
Sbjct: 359 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 418

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM  RG  A+ VT+N ++ G C  G +  AL + +++   G+  +  +   +L+  C  
Sbjct: 419 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 478

Query: 428 GELEKAIELLRLML-----------CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           G+L+ A+E+ + M              G  P   T N L+  L   G   +A      + 
Sbjct: 479 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 538

Query: 477 EMGFKPESDSWALLVELICRGRKL 500
             G  P++ +++ +++ +C+  +L
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRL 562



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 216/461 (46%), Gaps = 53/461 (11%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  ++  + R ++ + V ++ ++M  +  +     F  L+K F +CS     L  F KI 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    P +   +T L+ L   ++V  A +F  +       +PN   F  L+   C+ G 
Sbjct: 142 KLGLH-PDVVTFTTLLHGLCVEDRVSEALDFF-HQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDG------------------------------ 247
           +  A  +L  M +  +  P  ITY T++DG                              
Sbjct: 200 IVEAVALLDRMMEDGLQ-PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258

Query: 248 ------LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                 LCK+GR  +A  LF EM  K  I PD  TYN +I GFC  G+   A+++++ M 
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
               +P+V  Y  L+N F KEGK  EA E++DEM    + P+TI Y ++I+ FC+  R+D
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 377

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A ++   M  +GC  D+ TF  ++ G C   +I++ + +L ++   G+  N  +Y  ++
Sbjct: 378 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM--- 478
           +  C  G+L  A++L + M+  G  P   T N LL  LC  G  +D A+ +F  ++    
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD-ALEMFKAMQKSKM 496

Query: 479 ---------GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                    G +P+  ++ +L+  +    K L A EL +E+
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 537



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 48/359 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY +++D   +  + +A + +   M  + C      F  L+  +      + 
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
            +E+ H       E P    ++                              NT  +N L
Sbjct: 414 GMELLH-------EMPRRGLVA------------------------------NTVTYNTL 436

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK- 267
           I   C  G L +A ++ ++M  S +  P+++T +TL+DGLC NG+ ++A+E+F+ M    
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 268 ---------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                    + + PD LTYN+LI G    GK   A+++ E M + G  P+   Y+++++G
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ +L EA ++F  M +    P+ + + TLIN +C+AGRVD+ LEL  EM  RG  AD
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            + +  ++ G  + G I  AL + +++   G+Y +  + R +L     K ELE+A+ +L
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 674



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 164/317 (51%), Gaps = 3/317 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P+   F  L+   C    +  A +   +M ++    PN++T++TL++GLC+ GR  
Sbjct: 143 LGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT-CRPNVVTFTTLMNGLCREGRIV 201

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + M+ +D + P  +TY  ++DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 202 EAVALLDRMM-EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++  CK+G+  +A+ +F EM+   + PD   Y ++I  FC +GR  +A +LL+EM ER 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+VT+N ++    +EGK  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++  LM  +G  P   T   L+   C A   +D    L  +   G    + ++  L+   
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440

Query: 495 CRGRKLLFAFELLDELV 511
           C    L  A +L  +++
Sbjct: 441 CLVGDLNAALDLSQQMI 457



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 158/306 (51%), Gaps = 16/306 (5%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    ++ ++   + +++D A++   Y        P+   F  LI  +C    ++   E
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMF-YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 416

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM +  +   N +TY+TLI G C  G    A++L ++M+S   + PD +T N L+DG
Sbjct: 417 LLHEMPRRGL-VANTVTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTLLDG 474

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L+ G   EGK  EA+E++
Sbjct: 475 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 534

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +    ++VTFN ++ G C+ 
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 594

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK-GELEKAIELLRLMLCRGFLPHYAT 451
           G++++ L +  ++   GI  +   Y I L +  +K G +  A+++ + M+  G  P   T
Sbjct: 595 GRVDDGLELFCEMGRRGIVADAIIY-ITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 653

Query: 452 SNELLV 457
              +L 
Sbjct: 654 IRNMLT 659



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 37/294 (12%)

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +AI+LF +M+ + + LP  + +  L+    R  + D    + + M+      +++++ 
Sbjct: 60  LEDAIDLFSDML-RSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+  FC   KL  A   F ++    L PD + +TTL++  C   RV EAL+   +M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            C+ ++VTF  ++ GLCREG+I EA+ +L+++  DG+   + +Y  +++  C+KG+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 434 IELLRLM-------------------LC-----------------RGFLPHYATSNELLV 457
           + LLR M                   LC                 +G  P   T N ++V
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             C +G   DA   L  ++E    P+  ++  L+    +  K   A EL DE++
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 94/196 (47%)

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L +GF +   L++A ++F +M      P  + +  L+    R  R D  + L ++M+ + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + DI +FNI++   C   K+  AL    K+   G++ +  ++  +L+  C +  + +A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +    M      P+  T   L+  LC+ G   +A   L  ++E G +P   ++  +V+ +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 495 CRGRKLLFAFELLDEL 510
           C+    + A  LL ++
Sbjct: 230 CKKGDTVSALNLLRKM 245


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 197/348 (56%), Gaps = 3/348 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS+ A +  L L +    +  A+ FL    +H  + PN   +NIL++  C RG LE A  
Sbjct: 116 PSVPAYNAVL-LALSDASLPSARRFLSSMLRH-GVAPNVYTYNILVRALCARGRLEEAVG 173

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V+ +M+ +  + PN +TY+TL+   C+ G    A  +   M  +    P+ +T+N +++G
Sbjct: 174 VVGDMRGAGCA-PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G+++ A+K+ + M   G  P+V +Y TL++G+CK G L E+  VF EM    L PD
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + +T+LI+  C+AG +++A+ L+ +M+ERG + + VTF  ++ G C++G +++AL  +E
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   GI  +   Y  ++N  C+ G ++ A EL+R M  +   P   T + ++   CK G
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             + A      +++ G  P++ +++ L+  +C  ++L  A EL + ++
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 217/410 (52%), Gaps = 15/410 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  TY  ++  L    + E    V+  M    C  +   +  L+  F  C   E
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF--CRAGE 202

Query: 148 RVLEMFHKIHPITRE----KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPN 201
             L+   ++  + RE    KP+L   ++ +N L ++ +++ A+   K  ++ +R  L P+
Sbjct: 203 --LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR---KVFDEMVREGLAPD 257

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N L+  +CK G L  +  V  EM +  +  P+++T+++LI   CK G   +A+ L 
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL-VPDVVTFTSLIHATCKAGNLEQAVALV 316

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            +M  +   + + +T+  LIDGFC+ G +D A   +E M+  G  P+V  Y  L+NG+CK
Sbjct: 317 AQMRERGLRM-NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G++  A+E+  EM+   +KPD + Y+T+I+ +C+ G +D A +L ++M ++G   D +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ ++ GLC E ++ +A  + E +   G+  ++ +Y  +++  C++G +EKA+ L   M+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            +G LP   T + L+  L K+   ++A   LF L      P++  +  L+
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 171/315 (54%), Gaps = 25/315 (7%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+   +N LI  +CK G ++ A E+++EM+  ++  P+++TYST+I G CK G    A
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK-PDVVTYSTIISGYCKVGNLDSA 417

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L ++M+ K  +LPDA+TY+ LI G C   +++ A ++ E M   G  P+ F YTTL++
Sbjct: 418 FQLNQKMLKKG-VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CKEG +++A  + DEM    + PD + Y+ LIN   ++ R  EA  LL ++       
Sbjct: 477 GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVP 536

Query: 378 DIVTFNII---------------LGGLCREGKIEEA----LGMLEKLWYDGIYLNKASYR 418
           D + ++ +               L G C +G ++EA      ML++ W     L+ + Y 
Sbjct: 537 DNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW----KLDGSVYS 592

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I+++  C+ G + KA+   + ML  GF P+  ++  L+  L + GM  +A  A+  L+  
Sbjct: 593 ILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTC 652

Query: 479 GFKPESDSWALLVEL 493
               ++++   L++L
Sbjct: 653 CPLADAEASKALIDL 667



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 202/422 (47%), Gaps = 20/422 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           +L +F+ ++ Q+G   +  T+ +++    +    E   A++ QM     + +E  F  L+
Sbjct: 277 SLAVFSEMT-QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 335

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F      +  L    ++     + PS+   +  +N   +  ++DLA+  ++   +  R
Sbjct: 336 DGFCKKGFLDDALLAVEEMRKCGIQ-PSVVCYNALINGYCKLGRMDLARELIR-EMEAKR 393

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+   ++ +I  +CK G L+SAF++ ++M K  +  P+ ITYS+LI GLC+  R  +A
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV-LPDAITYSSLIRGLCEEKRLNDA 452

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELFE M+ +  + PD  TY  LIDG C+ G V++A  + + M   G  P+V  Y+ L+N
Sbjct: 453 CELFENML-QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 511

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC---------------FCRAGRVDE 362
           G  K  + +EA  +  ++ +    PD I Y  L+ C               FC  G + E
Sbjct: 512 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 571

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A ++ + M +R  K D   ++I++ G CR G + +AL   +++   G   N  S   ++ 
Sbjct: 572 ADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVR 631

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
              ++G + +A   ++ +L    L     S  L+    K G  +     L G+   G  P
Sbjct: 632 GLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691

Query: 483 ES 484
            S
Sbjct: 692 SS 693


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 227/451 (50%), Gaps = 22/451 (4%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           +EI N+    +G   +  T+  ++  L R  +      ++ +M        E  F  LM+
Sbjct: 195 VEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQ 254

Query: 139 HF---SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI----ESNQVDLAQNFL-K 190
            F    N +   R+ E       +    PS    +  +N+L+    +  +++   +F+ +
Sbjct: 255 GFIEEGNMNGALRIREQM-----VAAGCPS---SNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            SN+  R  P+   FN L+   C+ G ++ A E+L  M +     P++ TY++LI GLCK
Sbjct: 307 MSNEGFR--PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD-PDIFTYNSLIFGLCK 363

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G   EA+E+  +M+ +D   P+ +TYN LI   C+  +V+ A ++   + + G  P+V 
Sbjct: 364 LGEVEEAVEILNQMILRD-FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 422

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            + +L+ G C     + A E+F+EMK     PD   Y  LI+  C  GR++EAL LLKEM
Sbjct: 423 TFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +  GC  ++VT+N ++ G C+  +IEEA  + +++   GI  N  +Y  +++  C+   +
Sbjct: 483 ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRV 542

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           E+A +L+  ML  G  P   T N LL   C+AG  + AA  +  +   G +P+S ++  L
Sbjct: 543 EEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602

Query: 491 VELICRGRKLLFAFELLDELVIKESGTIQVP 521
           +  + +  ++  A  LL  + +K  G +  P
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLK--GMVLAP 631



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 218/424 (51%), Gaps = 17/424 (4%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E+ + + E   +GF  +  T+ ++++ L R    +    +L  M  E   F   IF    
Sbjct: 299 EVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE--GFDPDIFTYNS 356

Query: 138 KHFSNCSLHE--RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
             F  C L E    +E+ +++  I R+  P+    +T ++ L + NQV+ A    +    
Sbjct: 357 LIFGLCKLGEVEEAVEILNQM--ILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTS 414

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              L P+ C FN LI+  C       A E+ +EMK ++  +P+  TY+ LID LC  GR 
Sbjct: 415 KGIL-PDVCTFNSLIQGLCLTNNHRLAMELFEEMK-TKGCHPDEFTYNMLIDSLCSRGRL 472

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA+ L +EM S      + +TYN LIDGFC+  +++ A++I + M+  G + NV  Y T
Sbjct: 473 EEALSLLKEMESSG-CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G CK  +++EA ++ D+M    LKPD   Y +L+  FCRAG + +A ++++ M   G
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           C+ D VT+  ++ GL + G++E A  +L  +   G+ L   +Y  V+    ++    +A+
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM---GFKPESDSWALLV 491
            L R M+ +G  P   T   +   LC  G     A+    LVEM   GF P+  S+ +L 
Sbjct: 652 RLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDF--LVEMTDKGFLPDFSSFLMLA 709

Query: 492 ELIC 495
           E +C
Sbjct: 710 EGLC 713



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 213/426 (50%), Gaps = 8/426 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +  T+ T++              +  QM    C     + +N++ H   C    R+
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCP-SSNVTVNVLVH-GYCK-EGRI 297

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E+   I  ++ E  +P     ++ +N L     V  A   L    Q     P+   +N 
Sbjct: 298 EEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE-GFDPDIFTYNS 356

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   CK G +E A E+L +M     S PN +TY+TLI  LCK  +  EA EL   + SK
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFS-PNTVTYNTLISTLCKENQVEEATELARVLTSK 415

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             ILPD  T+N LI G C       A ++ E MK  GC+P+ F Y  L++  C  G+L+E
Sbjct: 416 G-ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEE 474

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +  EM++     + + Y TLI+ FC+  R++EA E+  EM+ +G   ++VT+N ++ 
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+  ++EEA  +++++  +G+  +K +Y  +L + C+ G+++KA ++++ M   G  P
Sbjct: 535 GLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEP 594

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T   L++ L KAG  E A+  L  +   G      ++  +++ + R ++   A  L 
Sbjct: 595 DSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLF 654

Query: 508 DELVIK 513
            E++ K
Sbjct: 655 REMMEK 660



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 205/403 (50%), Gaps = 13/403 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALEI + V  Q+GF+ +  TY +++  L +  + E    +L QM       +   +  L+
Sbjct: 335 ALEILD-VMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLI 393

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 +  E   E+  ++       P +   ++ +  L  +N   LA        + ++
Sbjct: 394 STLCKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELF----EEMK 448

Query: 198 LK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            K   P+   +N+LI   C RG LE A  +LKEM+ S  S  N++TY+TLIDG CKN R 
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSR-NVVTYNTLIDGFCKNKRI 507

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA E+F+EM     I  + +TYN LIDG C+  +V+ A ++M+ M   G  P+ F Y +
Sbjct: 508 EEAEEIFDEM-ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+  FC+ G +++A ++   M +   +PD++ Y TLI    +AGRV+ A  LL+ ++ +G
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG-ELEKA 433
                 T+N ++  L RE +  EA+ +  ++   G   +  +Y++V    C  G  + +A
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEA 686

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           ++ L  M  +GFLP +++   L   LC   M ED  I L   V
Sbjct: 687 VDFLVEMTDKGFLPDFSSFLMLAEGLCALSM-EDTLIKLVNRV 728



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 181/368 (49%), Gaps = 22/368 (5%)

Query: 167 KAISTCLNLLIESNQVDLAQNF---------------------LKYSNQHLRLKPNTCIF 205
           +A+S   + L  S    L QNF                     L ++++     P++ I+
Sbjct: 49  QAVSPSFSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIY 108

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             +++   K G+  S   VL+EMK +        T+  LI+   K   F EA+ + + M 
Sbjct: 109 EEVLRKLGKDGSFGSMRRVLQEMKHTGCEI-RRGTFLILIESYAKFELFDEAVAVVDIME 167

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +  +  DA TYN L++    G K+   + +   M + G  P+V  +  L+   C+  ++
Sbjct: 168 EEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQI 227

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A  + +EM ++ L PD   +TTL+  F   G ++ AL + ++M   GC +  VT N++
Sbjct: 228 RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVL 287

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G C+EG+IEE L  ++++  +G   ++ ++  ++N  C+ G ++ A+E+L +ML  GF
Sbjct: 288 VHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGF 347

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   T N L+  LCK G  E+A   L  ++   F P + ++  L+  +C+  ++  A E
Sbjct: 348 DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATE 407

Query: 506 LLDELVIK 513
           L   L  K
Sbjct: 408 LARVLTSK 415



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 158/309 (51%), Gaps = 1/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F ILI+ + K    + A  V+  M++      +  TY+ L++ L    + +    +   M
Sbjct: 143 FLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRM 202

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VS+  I PD  T+N+LI   CR  ++  A  +ME M + G +P+   +TTLM GF +EG 
Sbjct: 203 VSRG-IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A  + ++M         +    L++ +C+ GR++E L  + EM   G + D  TFN 
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLCR G ++ AL +L+ +  +G   +  +Y  ++   C+ GE+E+A+E+L  M+ R 
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           F P+  T N L+  LCK    E+A      L   G  P+  ++  L++ +C       A 
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441

Query: 505 ELLDELVIK 513
           EL +E+  K
Sbjct: 442 ELFEEMKTK 450


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 238/495 (48%), Gaps = 62/495 (12%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT----- 122
           ++ C    Q ALE+F++VS +     N   Y+ I+  L   K +     ++R +      
Sbjct: 44  ILTCRTANQ-ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQN 102

Query: 123 ----------------YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSL 166
                            E+ KF   +F  L+  FS   L E  L +++K+  +    P++
Sbjct: 103 SRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL----PAM 158

Query: 167 KAISTCLNLLIESNQVDL-------------AQNFLKYSN------------QHLRLK-- 199
           +A +  L+ L++  + D              + N + Y              +  RL   
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218

Query: 200 -------PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                  P   I+ ILI+  C    +  A  + + M+ S M  PNL TY+T++DG CK  
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM-LPNLYTYNTMMDGYCKIA 277

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
             ++A+EL++EM+  D +LP+ +T+ +LIDG C+  ++  A+K +  M + G  PN+F Y
Sbjct: 278 HVKKALELYQEMLG-DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L++G+CK G L EA  +  E++   + PD   Y+ LI   C   R++EA  LL+EMK+
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK 396

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G   + VT+N ++ G C+EG +E+A+ +  ++   GI  N  ++  +++  C+ G++E 
Sbjct: 397 KGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+ L   M+ +G LP       L+    K G  ++A      + E G  P   + + L++
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLID 516

Query: 493 LICRGRKLLFAFELL 507
            +C+  ++  A +L 
Sbjct: 517 GLCKDGRISDAIKLF 531



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 207/428 (48%), Gaps = 18/428 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F+ + E+K F      Y  ++  L    +    +++ R M       +   +  +M
Sbjct: 212 AFRLFDEMIEKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             +   +  ++ LE++ ++       P++      ++ L +++++  A+ FL        
Sbjct: 271 DGYCKIAHVKKALELYQEMLG-DGLLPNVVTFGILIDGLCKTDEMVSARKFL-IDMASFG 328

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  ++N LI  +CK G L  A  +  E++K ++  P++ TYS LI GLC   R  EA
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI-LPDVFTYSILIKGLCGVDRMEEA 387

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM  K   LP+A+TYN LIDG+C+ G +++A ++   M   G  PN+  ++TL++
Sbjct: 388 DGLLQEM-KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK GK++ A  ++ EM    L PD + YT LI+   + G   EA  L KEM+E G   
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 378 DIVTFNIILGGLCREGKIEEALGM-LEKLWYDGI------------YLNKASYRIVLNFS 424
           ++ T + ++ GLC++G+I +A+ + L K   D                N   Y  ++   
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C  G + KA +    M C G  P   T   ++    +A    D  +    +++MG  P S
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626

Query: 485 DSWALLVE 492
             + +L +
Sbjct: 627 SVYRVLAK 634



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 133/248 (53%), Gaps = 15/248 (6%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI  +CK G +E A EV  +M +  +  PN+IT+STLIDG CK G+   A+ 
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIE-PNIITFSTLIDGYCKAGKMEAAMG 459

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+ EMV K  +LPD + Y  LIDG  + G    A ++ + M+  G +PNVF  + L++G 
Sbjct: 460 LYTEMVIKG-LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 320 CKEGKLQEAKEVF-------------DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           CK+G++ +A ++F             +E+   L  P+ + YT LI   C  GR+ +A + 
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             +M+  G + D+ T  +I+ G  R   + + + +   +   GI  N + YR++     +
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEE 638

Query: 427 KGELEKAI 434
            G L+ A+
Sbjct: 639 SGYLKSAL 646


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 220/437 (50%), Gaps = 11/437 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++ N+ S  +G      TY  IL  L +  K++    VL +M       +   +  L+
Sbjct: 311 AFQLLNSFS-SRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSN-Q 194
                    + +LE       ++R    P L + S+ + +L  +    L Q  + +   +
Sbjct: 370 VEICR---RDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH--LYQALMHFREME 424

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + P+  I+ ILI   C+ G L  A ++  EM  ++  + +++TY+T ++GLCK   F
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML-ARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  LF EMV +  + PD  T+  LI G+C+ G +D+A  + E M      P+   Y T
Sbjct: 484 ADADMLFNEMVERGMV-PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++GFCK G++  AKE++D+M    + PD I Y T++N FC +G + EAL L  +M E+G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + ++VT N ++ G CR G + +A   L K+  +GI  +  SY  +++   ++  LEKA 
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L+  M  RG   +  T N +L   C  G  ++A   L  ++E+G  P+  +++ L+   
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722

Query: 495 CRGRKLLFAFELLDELV 511
                +  AF   DE++
Sbjct: 723 VSQDNMKEAFRFHDEML 739



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 228/462 (49%), Gaps = 24/462 (5%)

Query: 63  GAAISLIKCEK---------EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           G ++S+  C K             A EI+  V  + G   N  T   +++ L + +KFE 
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV-RGGIELNVYTLNIMVNALCKDRKFEN 275

Query: 114 VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER---VLEMFHKIHPITRE--KPSLKA 168
           V   L  M        +G+F +++ + +  + + R   V E F  ++  +    +P L  
Sbjct: 276 VMFFLSDME------GKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLT 329

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +  L  L +  + D A++ L    Q L L PN   +N L+   C+R  +  A E+  EM
Sbjct: 330 YNAILYGLCKIGKYDRAKDVLIEMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
            +  +  P+L+++S+LI  L +NG   +A+  F EM  +  I+PD + Y +LIDGFCR G
Sbjct: 389 SRRGV-LPDLVSFSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYTILIDGFCRNG 446

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            +  A K+ + M   GC  +V  Y T +NG CK+    +A  +F+EM    + PD   +T
Sbjct: 447 ALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFT 506

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           TLI  +C+ G +D+AL L + M     K D VT+N ++ G C+ G++  A  + + +   
Sbjct: 507 TLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            I  +  SY  VLN  C  G L +A+ L   ML +G  P+  T N L+   C++G    A
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              L  ++  G  P+S S+  L++   +   L  AF L++E+
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 222/467 (47%), Gaps = 26/467 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQ-KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           L +C  +    L+    VS     F H++ + + ++  L R ++     A + +M  ++ 
Sbjct: 107 LFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSG 166

Query: 127 KFHEGIFLNLMK---HFSNCSL----------HERVLEMFHKIHPITREKPSLKAISTC- 172
                +  +L+    +F +  L            + L    +   I R K    +I+ C 
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACN 226

Query: 173 --LNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
             L  L+ +  VDLA        + +R  ++ N    NI++   CK    E+    L +M
Sbjct: 227 KLLGGLVRTGWVDLAWEIY---GEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM 283

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           +   + + +++TY+TLI+  C+ G   EA +L     S+  + P  LTYN ++ G C+ G
Sbjct: 284 EGKGV-FADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG-MEPGLLTYNAILYGLCKIG 341

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K DRAK ++  M   G  PN   Y TL+   C+   + EA+E+FDEM    + PD + ++
Sbjct: 342 KYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFS 401

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           +LI    R G + +AL   +EM+  G   D V + I++ G CR G + +AL M +++   
Sbjct: 402 SLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR 461

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G +++  +Y   LN  C+K     A  L   M+ RG +P + T   L+   CK G   D 
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDG-NMDK 520

Query: 469 AIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           A+ LF  +V    KP+  ++  L++  C+  ++  A EL D+++ K+
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 147/248 (59%), Gaps = 2/248 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F  LI+ +CK G ++ A  + + M ++ +  P+ +TY+TLIDG CK G    A E
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLK-PDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+++M+ KD I+PD ++Y  +++GFC  G +  A  + + M   G  PN+    TL+ G+
Sbjct: 559 LWDDMIRKD-IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G + +A E   +M +  + PD+  Y TLI+ + +   +++A  L+ EM++RG + +I
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNI 677

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N+IL G C EGK++EA  +L K+   GI  + A+Y  ++N    +  +++A      
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDE 737

Query: 440 MLCRGFLP 447
           ML RG +P
Sbjct: 738 MLQRGLVP 745



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI  +C+ G +E AF++L       M  P L+TY+ ++ GLCK G++  A ++  EM
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGME-PGLLTYNAILYGLCKIGKYDRAKDVLIEM 353

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +    + P+A TYN L+   CR   +  A++I + M   G  P++ ++++L+    + G 
Sbjct: 354 LQLG-LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F EM+   + PD + YT LI+ FCR G + +AL++  EM  RGC  D+VT+N 
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            L GLC++    +A  +  ++   G+  +  ++  ++   C+ G ++KA+ L   M+   
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N L+   CKAG    A      ++     P+  S+  ++   C    L  A 
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592

Query: 505 ELLDELVIK 513
            L D+++ K
Sbjct: 593 NLCDQMLEK 601



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 139/285 (48%), Gaps = 8/285 (2%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY T L+ L + K F   D +  +M           F  L++ +      ++ L +F  
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHC 213
           +   T  KP     +T ++   ++ ++  A+      +  +R  + P+   +  ++   C
Sbjct: 528 MVR-TNLKPDKVTYNTLIDGFCKAGEMGRAKELW---DDMIRKDIIPDHISYGTVLNGFC 583

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
             G L  A  +  +M +  +  PNL+T +TLI G C++G   +A E   +M+S + I+PD
Sbjct: 584 SSGLLPEALNLCDQMLEKGIR-PNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS-NGIIPD 641

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           + +YN LIDG+ +   +++A  ++  M+  G   N+  Y  ++NGFC EGK+QEA++V  
Sbjct: 642 SFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLR 701

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +M    + PD   Y++LIN       + EA     EM +RG   D
Sbjct: 702 KMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 185/351 (52%), Gaps = 3/351 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP +   +T ++ L +   V+ A  FL        + PN   +N ++   C  G L  A 
Sbjct: 225 KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR-GIPPNVFTYNCMVHGFCILGQLNEAT 283

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + KEM    +  P+ +T + L+DGLCK G   EA  +FE M  K  + P+  TYN L+D
Sbjct: 284 RLFKEMVGRDV-MPDTVTLTILVDGLCKEGMVSEARLVFETMTEKG-VEPNISTYNALMD 341

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+C    ++ AKK+ E M   GC P V +Y  L+NGFCK  ++ EAK +  EM +  L P
Sbjct: 342 GYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNP 401

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           DT+ Y+TL+   C+ GR  EAL + KEM   G   ++VT++I+L G C+ G ++EAL +L
Sbjct: 402 DTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLL 461

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +    +  N   + I++      G+LE A EL   +   G  P   T   ++  L K 
Sbjct: 462 KSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKE 521

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           G++++A      + + GF P S S+ ++++   + +    A  L+DE+V K
Sbjct: 522 GLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK 572



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 223/452 (49%), Gaps = 22/452 (4%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           F +H   IS   C ++P              GF  NN+T  +I D LA + +   ++   
Sbjct: 35  FFNH-HHISTSACTRKPSLP-------QNNGGFVSNNSTNISIDDALASFYRMVRMNP-- 84

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           R    E  KF  G F    ++ +  SL  + +++F   H       ++ +++  +N L  
Sbjct: 85  RPSVAEFGKF-LGSFAKKKQYSTVVSLCNQ-MDLFGVTH-------NVYSLNVLINCLCR 135

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
            N VD A + L    + L + P    FN LI   C  G ++ A E+  EM +     PN+
Sbjct: 136 LNHVDFAVSILGKMFK-LGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE-PNV 193

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           I+Y+T+I+GLCK G    A+++F++M  ++   PD +TYN +ID  C+   V+ A + + 
Sbjct: 194 ISYNTIINGLCKTGNTSMAVDVFKKM-EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLS 252

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M + G  PNVF Y  +++GFC  G+L EA  +F EM    + PDT+  T L++  C+ G
Sbjct: 253 EMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEG 312

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            V EA  + + M E+G + +I T+N ++ G C +  + EA  + E +   G      SY 
Sbjct: 313 MVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYN 372

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I++N  C+   +++A  LL  M  +   P   T + L+  LC+ G  ++A      +   
Sbjct: 373 ILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSY 432

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G  P   ++++L++  C+   L  A +LL  +
Sbjct: 433 GLLPNLVTYSILLDGFCKHGHLDEALKLLKSM 464



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK----FHEGIF 133
           A+E+FN +  ++G   N  +Y TI++ L +         V ++M    CK     +  I 
Sbjct: 177 AVELFNEMV-RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTII 235

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
            +L K        E + EM  +  P     P++   +  ++      Q++ A    K   
Sbjct: 236 DSLCKDRLVNDAMEFLSEMLDRGIP-----PNVFTYNCMVHGFCILGQLNEATRLFKEMV 290

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
               + P+T    IL+   CK G +  A  V + M +  +  PN+ TY+ L+DG C    
Sbjct: 291 GR-DVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVE-PNISTYNALMDGYCLQRL 348

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA ++FE M+ +    P   +YN+LI+GFC+  ++D AK ++  M +   NP+   Y+
Sbjct: 349 MNEAKKVFEIMI-RQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYS 407

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TLM G C+ G+ +EA  +F EM ++ L P+ + Y+ L++ FC+ G +DEAL+LLK M+E+
Sbjct: 408 TLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
             + +IV   I++ G+   GK+E A  +  KL+ DGI     +Y +++    ++G  ++A
Sbjct: 468 KLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEA 527

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            +L R M   GFLP+  + N ++    +   +  A   +  +V   F     ++ +L++L
Sbjct: 528 YDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDL 587



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 159/315 (50%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   F   +    K+    +   +  +M    +++ N+ + + LI+ LC+      A+
Sbjct: 85  RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTH-NVYSLNVLINCLCRLNHVDFAV 143

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +  +M  K  I P A T+N LI+G C  GK+  A ++   M   G  PNV +Y T++NG
Sbjct: 144 SILGKMF-KLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIING 202

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK G    A +VF +M+    KPD + Y T+I+  C+   V++A+E L EM +RG   +
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + T+N ++ G C  G++ EA  + +++    +  +  +  I+++  C++G + +A  +  
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFE 322

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  +G  P+ +T N L+   C   +  +A      ++  G  P   S+ +L+   C+ R
Sbjct: 323 TMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSR 382

Query: 499 KLLFAFELLDELVIK 513
           ++  A  LL E+  K
Sbjct: 383 RMDEAKSLLAEMYHK 397



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 134/227 (59%), Gaps = 2/227 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +NILI   CK   ++ A  +L EM    ++ P+ +TYSTL+ GLC+ GR +EA+ 
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALN-PDTVTYSTLMQGLCQFGRPKEALN 424

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+EM S   +LP+ +TY++L+DGFC+ G +D A K+++ M+     PN+ ++T L+ G 
Sbjct: 425 IFKEMCSYG-LLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
              GKL+ AKE+F ++    ++P    YT +I    + G  DEA +L ++M++ G   + 
Sbjct: 484 FIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNS 543

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
            ++N+++ G  +      A+ +++++       N ++++++L+   Q
Sbjct: 544 CSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQ 590


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 183/326 (56%), Gaps = 6/326 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N+L+   CK G L+ A + L  M  S  S PN+IT++ ++  +C  GR+ +A 
Sbjct: 48  KPDVVTYNVLVNGMCKEGRLDEAIKFLNSMP-SYGSQPNVITHNIILRSMCSTGRWMDAE 106

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +L  EMV K    P  +T+N+LI+  CR G + RA  I+E M  +GC PN  +Y  L++G
Sbjct: 107 KLLTEMVRKG-CSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FCKE K+  A +  + M +    PD + Y T++   C+ G+VD A+ELL ++  +GC   
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPV 225

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+N ++ GL + GK ++A+ +L ++   G+  +  +Y  ++    ++G++E+AI+   
Sbjct: 226 LITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH 285

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P+  T N ++  LCKA   + A   L  ++  G KP   S+ +L+E I    
Sbjct: 286 DVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEG 345

Query: 499 KLLFAFELLDEL----VIKESGTIQV 520
               A ELL+EL    V+K+S   QV
Sbjct: 346 LAKEALELLNELCSRGVVKKSSAEQV 371



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 184/331 (55%), Gaps = 3/331 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP +   +  +N + +  ++D A  FL  S      +PN    NI+++  C  G    A 
Sbjct: 48  KPDVVTYNVLVNGMCKEGRLDEAIKFLN-SMPSYGSQPNVITHNIILRSMCSTGRWMDAE 106

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++L EM +   S P+++T++ LI+ LC+ G    AI++ E+M +     P++L+YN L+ 
Sbjct: 107 KLLTEMVRKGCS-PSVVTFNILINFLCRKGLLGRAIDILEKMPTHG-CTPNSLSYNPLLH 164

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GFC+  K+DRA + +E M + GC P++  Y T++   CK+GK+  A E+ +++ +    P
Sbjct: 165 GFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSP 224

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
             I Y T+I+   + G+ D+A+ELL EM+ +G K D++T++ ++ GL REGK+EEA+   
Sbjct: 225 VLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFF 284

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +   G+  N  +Y  ++   C+  + ++AI+ L  M+ +G  P   +   L+  +   
Sbjct: 285 HDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANE 344

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           G+A++A   L  L   G   +S +  ++V L
Sbjct: 345 GLAKEALELLNELCSRGVVKKSSAEQVVVRL 375



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 150/276 (54%), Gaps = 1/276 (0%)

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           YP++ITY+ LI+  C      +A++L +EM S+    PD +TYNVL++G C+ G++D A 
Sbjct: 13  YPDVITYTILIEATCAESGVGQAMKLLDEMGSRG-CKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           K +  M + G  PNV  +  ++   C  G+  +A+++  EM      P  + +  LIN  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           CR G +  A+++L++M   GC  + +++N +L G C+E K++ A+  LE +   G Y + 
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +L   C+ G+++ A+ELL  +  +G  P   T N ++  L K G  + A   L  
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +   G KP+  +++ L+  + R  K+  A +   ++
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 113/206 (54%)

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C P+V  YT L+   C E  + +A ++ DEM +   KPD + Y  L+N  C+ GR+DEA+
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           + L  M   G + +++T NIIL  +C  G+  +A  +L ++   G   +  ++ I++NF 
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+KG L +AI++L  M   G  P+  + N LL   CK    + A   L  +V  G  P+ 
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
            ++  ++  +C+  K+  A ELL++L
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQL 217



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 39/193 (20%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+ N +S  KG +    TY T++D L++  K +    +L +M  +  K     + +L+
Sbjct: 210 AVELLNQLS-SKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLI 268

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
              S     E  ++ FH +      KP+    ++ +  L ++ Q D A +FL Y      
Sbjct: 269 AGLSREGKVEEAIKFFHDVEGFGV-KPNAFTYNSIMFGLCKAQQTDRAIDFLAY------ 321

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
                     +I   CK                     P  ++Y+ LI+G+   G  +EA
Sbjct: 322 ----------MISKGCK---------------------PTEVSYTILIEGIANEGLAKEA 350

Query: 258 IELFEEMVSKDQI 270
           +EL  E+ S+  +
Sbjct: 351 LELLNELCSRGVV 363


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 180/324 (55%), Gaps = 14/324 (4%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGR--- 253
           +KPN    NILI   C+ G + SAF VL ++ K  M Y PN IT +TLI GLC NG+   
Sbjct: 93  IKPNLVNCNILINSFCQLGHIPSAFSVLTKILK--MGYKPNTITLNTLIKGLCLNGKIHD 150

Query: 254 -------FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
                   ++A++LF +M+ ++ I PD  T+ +L+DGFC+ G+V  AK ++  M   G  
Sbjct: 151 KHCIVGKLKDAVDLFNKMILEN-INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIK 209

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P V  Y +LM+G+    ++ +AK +F+ M    + PD   Y+ LIN FC+   +DEA+EL
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMEL 269

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           LKEM  +    ++VT++ ++ GLC+ GKI  AL +++++   G   N  +Y  +L+  C+
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
             +++ AI LL  M  +G  P+  T   L+  LC++G  EDA      L+  G      +
Sbjct: 330 NHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYT 389

Query: 487 WALLVELICRGRKLLFAFELLDEL 510
           + ++++  C       A  LL ++
Sbjct: 390 YTVMIQGFCDKGLFDEALTLLSKM 413



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 218/434 (50%), Gaps = 17/434 (3%)

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAV 117
            FI + +  +      +   A+ +FN + +Q      N  +  IL  L + K +  V  +
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNP-TPPNIEFNKILGSLVKSKHYHTVLYL 84

Query: 118 LRQMTYE-------TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
            ++M +         C      F  L    S  S+  ++L+M +K + IT     +K + 
Sbjct: 85  SQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNT-LIKGL- 142

Query: 171 TCLNLLIESNQ--VDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
            CLN  I      V   ++ +   N+ +   + P+   F IL+   CK G ++ A  VL 
Sbjct: 143 -CLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVL- 200

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
            M   Q   P ++TY++L+DG     +  +A  +F  M ++  + PD  +Y++LI+GFC+
Sbjct: 201 AMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTM-AQLGVSPDIQSYSILINGFCK 259

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
              +D A ++++ M +    PNV  Y++L++G CK GK+  A ++ DEM +    P+ + 
Sbjct: 260 IKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVT 319

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y+++++  C+  +VD A+ LL +MK +G + ++ T+ I++ GLC+ GK+E+A  + E L 
Sbjct: 320 YSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLL 379

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G  LN  +Y +++   C KG  ++A+ LL  M   G +P+  T   +++ L K    E
Sbjct: 380 VKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENE 439

Query: 467 DAAIALFGLVEMGF 480
            A   L  ++E  F
Sbjct: 440 MAEKLLCEMIETNF 453



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 111/238 (46%), Gaps = 12/238 (5%)

Query: 284 FCRGGKVDRAKKIME-FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           F     VD A  +    ++ N   PN+  +  ++    K         +  +M+   +KP
Sbjct: 37  FHNNNDVDDAVSLFNRLLQQNPTPPNI-EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 95

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI------- 395
           + +    LIN FC+ G +  A  +L ++ + G K + +T N ++ GLC  GKI       
Sbjct: 96  NLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIV 155

Query: 396 ---EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
              ++A+ +  K+  + I  +  ++ I+++  C++G +++A  +L +M+ +G  P   T 
Sbjct: 156 GKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTY 215

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           N L+           A      + ++G  P+  S+++L+   C+ + +  A ELL E+
Sbjct: 216 NSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 180/364 (49%), Gaps = 70/364 (19%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +N +I   C RG +++A ++++EM++     PN  TY T+I G CK GR  EA+
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD--------------------------- 291
           ++F+EM++K ++ P+A+ YN LI G+C  GK+D                           
Sbjct: 571 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 630

Query: 292 --------RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE--------------------- 322
                    A +++E M   G  P+VF Y  L+NG CKE                     
Sbjct: 631 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 690

Query: 323 --------------GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                         G++QE  ++FDE     ++PD + Y  LIN    +G +D A E++ 
Sbjct: 691 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 750

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM+++    D VT+N ++ GLC  G+++EA  +++++   GI  +  +Y  +++    KG
Sbjct: 751 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 810

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +++ A+ +   M+ +GF P   T N L+  LCK G  +DA   +  +VE G  P+  ++ 
Sbjct: 811 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 870

Query: 489 LLVE 492
            L+E
Sbjct: 871 SLIE 874



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 162/374 (43%), Gaps = 42/374 (11%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++   I+        Q AL+I   + E+ G   N  TY T++    +  + +   
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            V  +M  +     E +  N +     C   +    + ++   + R    +       NL
Sbjct: 571 KVFDEMLTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVER---GVAMTVATYNL 626

Query: 176 LIESNQVDLAQNFLKYSNQHLR---LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L+ +  +D          + +    L P+   +NILI  HCK G ++ A E+ + M +  
Sbjct: 627 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 686

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMV--------------------------- 265
           +    ++TY+ LI  L K G+ +E  +LF+E V                           
Sbjct: 687 VRA-TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 745

Query: 266 -------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                   K +I PD +TYN L+ G C  G+VD A+K+++ M   G  P++  Y TL++G
Sbjct: 746 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 805

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +  +G +++A  + +EM N    P  + Y  LI   C+ G+ D+A  ++KEM E G   D
Sbjct: 806 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 865

Query: 379 IVTFNIILGGLCRE 392
             T+  ++ GL  E
Sbjct: 866 DSTYISLIEGLTTE 879



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 6/182 (3%)

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +F +M    L   T  +  ++   C AG+   ALELL++M     + + VT+N ++ G C
Sbjct: 470 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFC 525

Query: 391 REGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PH 448
             G+++ AL ++ ++    GI  N+ +Y  V++  C+ G +++A+++   ML +G + P 
Sbjct: 526 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 585

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
               N L+   C  G  + A +    +VE G      ++ LLV  +    +   A+EL++
Sbjct: 586 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 645

Query: 509 EL 510
           E+
Sbjct: 646 EM 647


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 180/364 (49%), Gaps = 70/364 (19%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +N +I   C RG +++A ++++EM++     PN  TY T+I G CK GR  EA+
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD--------------------------- 291
           ++F+EM++K ++ P+A+ YN LI G+C  GK+D                           
Sbjct: 202 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 261

Query: 292 --------RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE--------------------- 322
                    A +++E M   G  P+VF Y  L+NG CKE                     
Sbjct: 262 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 321

Query: 323 --------------GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                         G++QE  ++FDE     ++PD + Y  LIN    +G +D A E++ 
Sbjct: 322 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 381

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM+++    D VT+N ++ GLC  G+++EA  +++++   GI  +  +Y  +++    KG
Sbjct: 382 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 441

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +++ A+ +   M+ +GF P   T N L+  LCK G  +DA   +  +VE G  P+  ++ 
Sbjct: 442 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 501

Query: 489 LLVE 492
            L+E
Sbjct: 502 SLIE 505



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 162/374 (43%), Gaps = 42/374 (11%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++   I+        Q AL+I   + E+ G   N  TY T++    +  + +   
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            V  +M  +     E +  N +     C   +    + ++   + R    +       NL
Sbjct: 202 KVFDEMLTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVER---GVAMTVATYNL 257

Query: 176 LIESNQVDLAQNFLKYSNQHLR---LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L+ +  +D          + +    L P+   +NILI  HCK G ++ A E+ + M +  
Sbjct: 258 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 317

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMV--------------------------- 265
           +    ++TY+ LI  L K G+ +E  +LF+E V                           
Sbjct: 318 VR-ATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 376

Query: 266 -------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                   K +I PD +TYN L+ G C  G+VD A+K+++ M   G  P++  Y TL++G
Sbjct: 377 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 436

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +  +G +++A  + +EM N    P  + Y  LI   C+ G+ D+A  ++KEM E G   D
Sbjct: 437 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 496

Query: 379 IVTFNIILGGLCRE 392
             T+  ++ GL  E
Sbjct: 497 DSTYISLIEGLTTE 510



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 6/182 (3%)

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +F +M    L   T  +  ++   C AG+   ALELL++M     + + VT+N ++ G C
Sbjct: 101 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFC 156

Query: 391 REGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PH 448
             G+++ AL ++ ++    GI  N+ +Y  V++  C+ G +++A+++   ML +G + P 
Sbjct: 157 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 216

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
               N L+   C  G  + A +    +VE G      ++ LLV  +    +   A+EL++
Sbjct: 217 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 276

Query: 509 EL 510
           E+
Sbjct: 277 EM 278


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 181/312 (58%), Gaps = 5/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N++I   C+ G ++ A E+L  +       P+ ++Y+TL+ GLC + R+ +  E
Sbjct: 211 PNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQ-PDTVSYTTLLKGLCASKRWDDVEE 269

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM+ K+  +P+ +T+++LI  FCRGG V+RA +++E M  +GC  N      ++N  
Sbjct: 270 LFAEMMEKN-CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSI 328

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+G++ +A ++ ++M ++   PDTI YTT++   CRA R D+A ELL EM    C  + 
Sbjct: 329 CKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNE 388

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFN  +  LC++G IE+A+ ++E++   G  +   +Y  ++N  C +G ++ A+EL R 
Sbjct: 389 VTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 448

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M C+   P+  T   LL  LC A   + AA  +  ++     P   ++ +LV   C+   
Sbjct: 449 MPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGF 505

Query: 500 LLFAFELLDELV 511
           L  A EL+++++
Sbjct: 506 LEEAIELVEQMM 517



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 207/406 (50%), Gaps = 13/406 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  +  +Y T+L  L   K+++ V+ +  +M  + C  +E  F  L++ F    + ER 
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 302

Query: 150 LEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +++  ++     E       + C   +N + +  +VD A   L     +    P+T  + 
Sbjct: 303 IQVLEQM----TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY-GCNPDTISYT 357

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            ++K  C+    + A E+L EM ++    PN +T++T I  LC+ G   +AI L E+M S
Sbjct: 358 TVLKGLCRAERWDDAKELLNEMVRNNCP-PNEVTFNTFICILCQKGLIEQAIMLIEQM-S 415

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +       +TYN L++GFC  G +D A   +E  ++  C PN   YTTL+ G C   +L 
Sbjct: 416 EHGCTVGVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLD 472

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A E+  EM      P+ + +  L++ FC+ G ++EA+EL+++M E GC  +++T+N +L
Sbjct: 473 GAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLL 532

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G+ ++   E+AL +L  L   G+  +  ++  ++    ++  +E+A++L  ++   G  
Sbjct: 533 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMR 592

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           P     N++L+ LCK    ++A      +V  G  P   ++ +L+E
Sbjct: 593 PKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIE 638



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 169/306 (55%), Gaps = 5/306 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+  +C+ G L++A  ++  M  +    P+  TY+ LI  LC  GR  +A+ L ++M
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMPVA----PDAYTYTPLIRVLCDRGRVADALSLLDDM 169

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + +    P+ +TY VL++  CR    ++A  +++ M+  GC PN+  Y  ++NG C+EG+
Sbjct: 170 LRRG-CQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 228

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A+E+ + + ++  +PDT+ YTTL+   C + R D+  EL  EM E+ C  + VTF++
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   CR G +E A+ +LE++   G   N     IV+N  C++G ++ A +LL  M   G
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   +   +L  LC+A   +DA   L  +V     P   ++   + ++C+   +  A 
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 408

Query: 505 ELLDEL 510
            L++++
Sbjct: 409 MLIEQM 414



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 170/318 (53%), Gaps = 2/318 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+   +  LI+  C RG +  A  +L +M + +   PN++TY+ L++ +C+N  F 
Sbjct: 137 MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR-RGCQPNVVTYTVLLEAMCRNSGFE 195

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ + +EM +K    P+ +TYNV+I+G CR G+VD A++++  + + G  P+  +YTTL
Sbjct: 196 QAMAVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTL 254

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   +  + +E+F EM      P+ + +  LI  FCR G V+ A+++L++M E GC
Sbjct: 255 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGC 314

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +    NI++  +C++G++++A  +L  +   G   +  SY  VL   C+    + A E
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M+     P+  T N  +  LC+ G+ E A + +  + E G      ++  LV   C
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434

Query: 496 RGRKLLFAFELLDELVIK 513
               +  A EL   +  K
Sbjct: 435 VQGHIDSALELFRSMPCK 452



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 219/448 (48%), Gaps = 50/448 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH-------------EG--- 131
           ++G   N  TY  +L+ + R   FE   AVL +M  + C  +             EG   
Sbjct: 171 RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230

Query: 132 -------------------IFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAI 169
                               +  L+K        + V E+F ++     EK   P+    
Sbjct: 231 DARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMM----EKNCMPNEVTF 286

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
              +        V+ A   L+   +H     NT + NI+I   CK+G ++ AF++L +M 
Sbjct: 287 DMLIRFFCRGGMVERAIQVLEQMTEH-GCATNTTLCNIVINSICKQGRVDDAFKLLNDM- 344

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
            S    P+ I+Y+T++ GLC+  R+ +A EL  EMV ++   P+ +T+N  I   C+ G 
Sbjct: 345 GSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMV-RNNCPPNEVTFNTFICILCQKGL 403

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +++A  ++E M  +GC   V  Y  L+NGFC +G +  A E+F  M     KP+TI YTT
Sbjct: 404 IEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTT 460

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           L+   C A R+D A EL+ EM    C  ++VTFN+++   C++G +EEA+ ++E++   G
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
              N  +Y  +L+   +    E A+ELL  ++ +G  P   T + ++  L K    E+ A
Sbjct: 521 CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEE-A 579

Query: 470 IALFGLVE-MGFKPESDSWALLVELICR 496
           + LF +V+ +G +P++  +  ++  +C+
Sbjct: 580 VQLFHVVQDIGMRPKAVVYNKILLGLCK 607



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 159/312 (50%), Gaps = 5/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LI++ C+RG    A  VL+  + S  S  ++  Y+TL+ G C+ G    A  
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG-SPVDVFAYNTLVAGYCRYGHLDAARR 132

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M     + PDA TY  LI   C  G+V  A  +++ M   GC PNV  YT L+   
Sbjct: 133 LIGSM----PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAM 188

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+    ++A  V DEM+     P+ + Y  +IN  CR GRVD+A ELL  +   G + D 
Sbjct: 189 CRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDT 248

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++  +L GLC   + ++   +  ++       N+ ++ +++ F C+ G +E+AI++L  
Sbjct: 249 VSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQ 308

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G   +    N ++  +CK G  +DA   L  +   G  P++ S+  +++ +CR  +
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368

Query: 500 LLFAFELLDELV 511
              A ELL+E+V
Sbjct: 369 WDDAKELLNEMV 380



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           R  L  A  +++         P++   + LI  LC+ GR  +A  +          + D 
Sbjct: 53  REDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV-DV 111

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
             YN L+ G+CR G +D A++++  M      P+ + YT L+   C  G++ +A  + D+
Sbjct: 112 FAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDD 168

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M     +P+ + YT L+   CR    ++A+ +L EM+ +GC  +IVT+N+I+ G+CREG+
Sbjct: 169 MLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 228

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +++A  +L +L   G   +  SY  +L   C     +   EL   M+ +  +P+  T + 
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           L+   C+ GM E A   L  + E G    +    +++  IC+  ++  AF+LL+++
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM 344


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 255/554 (46%), Gaps = 82/554 (14%)

Query: 11  CCR--FSSFSTSSSSLPWISPLEVIKANTP--KADPPVETSDTCVDARKRSRFISHGAAI 66
           CC   FS+FS  +     +S  E +++     KAD  ++     + +R     I      
Sbjct: 41  CCERGFSAFSDRN-----LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLF 95

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK----FEAVDAVLRQMT 122
           S I   K+    L +   + E KG  HN  T + +++   R +K    F A+  +++ + 
Sbjct: 96  SAIAKTKQYDLVLALCKQM-ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LG 153

Query: 123 YETCKFHEGIFLNLM----KHFSNCSLHERVLEMFHKIHPITRE---------------- 162
           YE         +N +    +      L +R++EM HK   IT                  
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213

Query: 163 -----------KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
                      +P+       LN++ +S Q  LA   L+   +   +K +   ++I+I  
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDG 272

Query: 212 HCKRGTLESAFEVLKEMKKSQMSY----------------------------------PN 237
            CK G+L++AF +  EM+   ++                                   PN
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++T+S LID   K G+ REA EL +EM+ +  I PD +TY  LIDGFC+   +D+A +++
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQMV 391

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M + GC+PN+  +  L+NG+CK  ++ +  E+F +M    +  DT+ Y TLI  FC  
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G+++ A EL +EM  R    +IVT+ I+L GLC  G+ E+AL + EK+    + L+   Y
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I+++  C   +++ A +L   +  +G  P   T N ++  LCK G   +A +    + E
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571

Query: 478 MGFKPESDSWALLV 491
            G  P+  ++ +L+
Sbjct: 572 DGHAPDGWTYNILI 585



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 184/367 (50%), Gaps = 16/367 (4%)

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP---NTCIFNI 207
           +M H     +R  P++   S   + + ++ Q DL     K     + LK    N    +I
Sbjct: 78  DMIH-----SRPLPTVIDFSRLFSAIAKTKQYDLVLALCK----QMELKGIAHNLYTLSI 128

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +I   C+   L  AF  + ++ K  + Y PN IT+STLI+GLC  GR  EA+EL + MV 
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIK--LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                PD +T N L++G C  GK   A  +++ M   GC PN   Y  ++N  CK G+  
Sbjct: 187 MGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A E+  +M+   +K D + Y+ +I+  C+ G +D A  L  EM+ +G   +I+T+NI++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           GG C  G+ ++   +L  +    I  N  ++ ++++   ++G+L +A EL + M+ RG  
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T   L+   CK    + A   +  +V  G  P   ++ +L+   C+  ++    EL
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 507 LDELVIK 513
             ++ ++
Sbjct: 426 FRKMSLR 432



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 213/437 (48%), Gaps = 28/437 (6%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF---- 128
           KE +  L I   V  + G   N  TY  +L+ + +  +      +LR+M     K     
Sbjct: 208 KEAEAMLLIDKMV--EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL---NLLI----ESNQ 181
           +  I   L KH S     +    +F+++         +K I+T +   N+LI     + +
Sbjct: 266 YSIIIDGLCKHGS----LDNAFNLFNEME--------MKGITTNIITYNILIGGFCNAGR 313

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
            D     L+   +  ++ PN   F++LI    K G L  A E+ KEM    ++ P+ ITY
Sbjct: 314 WDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA-PDTITY 371

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           ++LIDG CK     +A ++ + MVSK    P+  T+N+LI+G+C+  ++D   ++   M 
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             G   +   Y TL+ GFC+ GKL  AKE+F EM +  + P+ + Y  L++  C  G  +
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           +ALE+ +++++   + DI  +NII+ G+C   K+++A  +   L   G+     +Y I++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
              C+KG L +A  L R M   G  P   T N L+      G A  +   +  L   GF 
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610

Query: 482 PESDSWALLVELICRGR 498
            ++ +  ++++++  GR
Sbjct: 611 VDASTIKMVIDMLSDGR 627



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 175/317 (55%), Gaps = 4/317 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRF 254
           L  +PNT  F+ LI   C  G +  A E++  M   +M + P+LIT +TL++GLC +G+ 
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRM--VEMGHKPDLITINTLVNGLCLSGKE 209

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA+ L ++MV      P+A+TY  +++  C+ G+   A +++  M+      +   Y+ 
Sbjct: 210 AEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G CK G L  A  +F+EM+   +  + I Y  LI  FC AGR D+  +LL++M +R 
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++VTF++++    +EGK+ EA  + +++ + GI  +  +Y  +++  C++  L+KA 
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +++ LM+ +G  P+  T N L+   CKA   +D       +   G   ++ ++  L++  
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448

Query: 495 CRGRKLLFAFELLDELV 511
           C   KL  A EL  E+V
Sbjct: 449 CELGKLNVAKELFQEMV 465



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 96/187 (51%)

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K  +A ++F +M +    P  I ++ L +   +  + D  L L K+M+ +G   ++ T +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++   CR  K+  A   + K+   G   N  ++  ++N  C +G + +A+EL+  M+  
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T N L+  LC +G   +A + +  +VE G +P + ++  ++ ++C+  +   A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 504 FELLDEL 510
            ELL ++
Sbjct: 248 MELLRKM 254



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 75/153 (49%)

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           + D+A++L ++M        ++ F+ +   + +  + +  L + +++   GI  N  +  
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I++N  C+  +L  A   +  ++  G+ P+  T + L+  LC  G   +A   +  +VEM
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G KP+  +   LV  +C   K   A  L+D++V
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 220/445 (49%), Gaps = 24/445 (5%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           LE   +   ++G   +  T+ T++  L R  +      +L +M+       E  F  LM+
Sbjct: 169 LETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQ 228

Query: 139 HF-------SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLK 190
            F       +   +  R+LEM      +T            +N+LI    ++   ++ L 
Sbjct: 229 GFVEEGSIKAALRVKARMLEMGCSPTKVT------------VNVLINGYCKLGRVEDALG 276

Query: 191 YSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           Y  Q +    +P+   +N  +   C+ G +  A +V+  M +     P++ TY+ +++ L
Sbjct: 277 YIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD-PDVFTYNIVVNCL 335

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           CKNG+  EA  +  +MV +   LPD  T+N LI   C G +++ A  +   +   G +P+
Sbjct: 336 CKNGQLEEAKGILNQMVERG-CLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           V+ +  L+N  CK G  Q A  +F+EMK+    PD + Y TLI+  C  G++ +AL+LLK
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM+  GC    VT+N I+ GLC++ +IEEA  + +++   GI  N  ++  +++  C+  
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            ++ A +L+  M+  G  P+  T N +L   CK G  + AA  L  +   GF+ +  ++ 
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574

Query: 489 LLVELICRGRKLLFAFELLDELVIK 513
            L+  +C+  +   A +LL  + IK
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIK 599



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 195/353 (55%), Gaps = 8/353 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESA 221
           P +   +  +N L ++ Q++ A+  L   NQ +     P+   FN LI   C    LE A
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGIL---NQMVERGCLPDITTFNTLIVALCSGNRLEEA 379

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++ +++    +S P++ T++ LI+ LCK G  + A+ LFEEM S     PD +TYN LI
Sbjct: 380 LDLARQVTLKGLS-PDVYTFNILINALCKVGDPQLALRLFEEMKSSG-CTPDEVTYNTLI 437

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C  GK+ +A  +++ M++ GC  +   Y T+++G CK+ +++EA+EVFD+M    + 
Sbjct: 438 DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 497

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            + I + TLI+  C+  R+D+A +L+ +M   G + + +T+N IL   C++G I++A  +
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 557

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L+ +  +G  ++  +Y  ++N  C+ G  + A++LLR M  +G        N ++  L +
Sbjct: 558 LQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFR 617

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GRKLLFAFELLDELVIK 513
                DA      + E+G  P++ ++ ++   +CR G  +  AF+ L E+V K
Sbjct: 618 RNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDK 670



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 127/244 (52%)

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I  D + YN L++    G K+   + +   M   G  P+V  + TLM   C+  +++ A 
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAV 205

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            + +EM +  + PD   +TTL+  F   G +  AL +   M E GC    VT N+++ G 
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+ G++E+ALG +++   +G   ++ +Y   +N  CQ G +  A++++ +M+  G  P  
Sbjct: 266 CKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDV 325

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T N ++  LCK G  E+A   L  +VE G  P+  ++  L+  +C G +L  A +L  +
Sbjct: 326 FTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQ 385

Query: 510 LVIK 513
           + +K
Sbjct: 386 VTLK 389


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 241/522 (46%), Gaps = 73/522 (13%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           KAD  ++     + +R     I      S I   K+    L +   + E KG  HN  T 
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM-ELKGIAHNLYTL 224

Query: 99  ATILDKLARYKK----FEAVDAVLRQMTYETCKFHEGIFLNLM----KHFSNCSLHERVL 150
           + +++   R +K    F A+  +++ + YE         +N +    +      L +R++
Sbjct: 225 SIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283

Query: 151 EMFHKIHPITRE---------------------------KPSLKAISTCLNLLIESNQVD 183
           EM HK   IT                             +P+       LN++ +S Q  
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-------- 235
           LA   L+   +   +K +   ++I+I   CK G+L++AF +  EM+   ++         
Sbjct: 344 LAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 402

Query: 236 --------------------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
                                     PN++T+S LID   K G+ REA EL +EM+ +  
Sbjct: 403 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-G 461

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I PD +TY  LIDGFC+   +D+A ++++ M + GC+PN+  +  L+NG+CK  ++ +  
Sbjct: 462 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 521

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+F +M    +  DT+ Y TLI  FC  G+++ A EL +EM  R    +IVT+ I+L GL
Sbjct: 522 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  G+ E+AL + EK+    + L+   Y I+++  C   +++ A +L   +  +G  P  
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 641

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            T N ++  LCK G   +A +    + E G  P+  ++ +L+
Sbjct: 642 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 188/372 (50%), Gaps = 14/372 (3%)

Query: 147 ERVLEMFHK-IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP---NT 202
           +  +++F   IH  +R  P++   S   + + ++ Q DL     K     + LK    N 
Sbjct: 168 DDAIDLFRDMIH--SRPLPTVIDFSRLFSAIAKTKQYDLVLALCK----QMELKGIAHNL 221

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELF 261
              +I+I   C+   L  AF  + ++ K  + Y PN IT+STLI+GLC  GR  EA+EL 
Sbjct: 222 YTLSIMINCFCRCRKLCLAFSAMGKIIK--LGYEPNTITFSTLINGLCLEGRVSEALELV 279

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           + MV      PD +T N L++G C  GK   A  +++ M   GC PN   Y  ++N  CK
Sbjct: 280 DRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 338

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G+   A E+  +M+   +K D + Y+ +I+  C+ G +D A  L  EM+ +G   +I+T
Sbjct: 339 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 398

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +NI++GG C  G+ ++   +L  +    I  N  ++ ++++   ++G+L +A EL + M+
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 458

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG  P   T   L+   CK    + A   +  +V  G  P   ++ +L+   C+  ++ 
Sbjct: 459 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 518

Query: 502 FAFELLDELVIK 513
              EL  ++ ++
Sbjct: 519 DGLELFRKMSLR 530



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 177/320 (55%), Gaps = 4/320 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRF 254
           L  +PNT  F+ LI   C  G +  A E++  M   +M + P+LIT +TL++GLC +G+ 
Sbjct: 250 LGYEPNTITFSTLINGLCLEGRVSEALELVDRM--VEMGHKPDLITINTLVNGLCLSGKE 307

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA+ L ++MV      P+A+TY  +++  C+ G+   A +++  M+      +   Y+ 
Sbjct: 308 AEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G CK G L  A  +F+EM+   +  + I Y  LI  FC AGR D+  +LL++M +R 
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++VTF++++    +EGK+ EA  + +++ + GI  +  +Y  +++  C++  L+KA 
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +++ LM+ +G  P+  T N L+   CKA   +D       +   G   ++ ++  L++  
Sbjct: 487 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 546

Query: 495 CRGRKLLFAFELLDELVIKE 514
           C   KL  A EL  E+V ++
Sbjct: 547 CELGKLNVAKELFQEMVSRK 566



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 214/442 (48%), Gaps = 28/442 (6%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF---- 128
           KE +  L I   V  + G   N  TY  +L+ + +  +      +LR+M     K     
Sbjct: 306 KEAEAMLLIDKMV--EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL---NLLI----ESNQ 181
           +  I   L KH S     +    +F+++         +K I+T +   N+LI     + +
Sbjct: 364 YSIIIDGLCKHGS----LDNAFNLFNEME--------MKGITTNIITYNILIGGFCNAGR 411

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
            D     L+   +  ++ PN   F++LI    K G L  A E+ KEM    ++ P+ ITY
Sbjct: 412 WDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA-PDTITY 469

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           ++LIDG CK     +A ++ + MVSK    P+  T+N+LI+G+C+  ++D   ++   M 
Sbjct: 470 TSLIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             G   +   Y TL+ GFC+ GKL  AKE+F EM +  + P+ + Y  L++  C  G  +
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 588

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           +ALE+ +++++   + DI  +NII+ G+C   K+++A  +   L   G+     +Y I++
Sbjct: 589 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 648

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
              C+KG L +A  L R M   G  P   T N L+      G A  +   +  L   GF 
Sbjct: 649 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 708

Query: 482 PESDSWALLVELICRGRKLLFA 503
            ++ +  ++++++   +   F+
Sbjct: 709 VDASTIKMVIDMLSDDKANYFS 730



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 96/187 (51%)

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K  +A ++F +M +    P  I ++ L +   +  + D  L L K+M+ +G   ++ T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++   CR  K+  A   + K+   G   N  ++  ++N  C +G + +A+EL+  M+  
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T N L+  LC +G   +A + +  +VE G +P + ++  ++ ++C+  +   A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 504 FELLDEL 510
            ELL ++
Sbjct: 346 MELLRKM 352



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 75/153 (49%)

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           + D+A++L ++M        ++ F+ +   + +  + +  L + +++   GI  N  +  
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I++N  C+  +L  A   +  ++  G+ P+  T + L+  LC  G   +A   +  +VEM
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G KP+  +   LV  +C   K   A  L+D++V
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 318


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 192/362 (53%), Gaps = 7/362 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP + A +T ++ L +  + + A  F         + PN   ++ ++   C  G L  A 
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ-GIPPNVVTYSSILHGFCNLGQLNEAT 266

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + K+M    +  PN +T++ L+DGLCK G   EA  +FE M++++ + PDA TY+ L+D
Sbjct: 267 SLFKQMIGRNV-MPNTVTFTILVDGLCKEGMILEARRVFE-MMTENGVEPDAYTYSALMD 324

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+C   ++D A+K+ + M   G  P+V  Y  L+NG CK  +L EAK +  EM +  L P
Sbjct: 325 GYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTP 384

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           DT+ Y+TL+  FC+AGR   A +L KEM   G   D +T++I+L GLC+ G ++EA  +L
Sbjct: 385 DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLL 444

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +    I  +   Y I++   C  G+LE A EL   +  +G  P   T   ++  L K 
Sbjct: 445 KAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKE 504

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK----ESGTI 518
           G++ +A      +V  G  P S ++ + ++   R      A  L++E+V +    +S T 
Sbjct: 505 GLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTF 564

Query: 519 QV 520
           Q+
Sbjct: 565 QM 566



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 213/418 (50%), Gaps = 9/418 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+ + +  GF  +  TY TI+  L +         +L++M  + CK     +  ++
Sbjct: 160 AVKLFDEIGKM-GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                     R  E  +    +  +   P++   S+ L+      Q++ A +  K     
Sbjct: 219 DSLCK---DRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR 275

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             + PNT  F IL+   CK G +  A  V + M ++ +  P+  TYS L+DG C   +  
Sbjct: 276 -NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVE-PDAYTYSALMDGYCLQSQMD 333

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA +LF+ MV K    P    YN+LI+G C+  +++ AK ++  M +    P+   Y+TL
Sbjct: 334 EAQKLFDIMVGKG-FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTL 392

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M GFC+ G+ Q A+++F EM ++ L PD+I Y+ L++  C+ G +DEA  LLK M+E   
Sbjct: 393 MQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI 452

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           +  I  +NI++ G+C  GK+E A  +   L+  GI  +  +Y ++++   ++G   +A E
Sbjct: 453 EPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACE 512

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           + R M+  G LP+  T N  +    + G   +A   +  +V  GF  +S ++ +L++L
Sbjct: 513 MFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 211/422 (50%), Gaps = 10/422 (2%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHERVLEM 152
             +  +L  L + K +  V ++ +QM     +   +   I +N + H +   +H      
Sbjct: 70  VVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVH-FAFSA 128

Query: 153 FHKIHPITREKPSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
             K+  +  + P+     T LN L  ++  +D  + F +     +   P+   +  +IK 
Sbjct: 129 LGKMFKLGLQ-PTHVTFGTLLNGLCSKAKIIDAVKLFDEIGK--MGFAPSLITYTTIIKG 185

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CK G   +A ++LK+M++     P+++ Y+T+ID LCK+ R  EA+  F EMV +  I 
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCK-PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG-IP 243

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+ +TY+ ++ GFC  G+++ A  + + M      PN   +T L++G CKEG + EA+ V
Sbjct: 244 PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRV 303

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F+ M    ++PD   Y+ L++ +C   ++DEA +L   M  +G    +  +NI++ G C+
Sbjct: 304 FEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCK 363

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             ++ EA  +L +++   +  +  +Y  ++   CQ G  + A +L + M   G LP   T
Sbjct: 364 SRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSIT 423

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + LL  LCK G  ++A   L  + E   +P    + +L++ +C   KL  A EL   L 
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLF 483

Query: 512 IK 513
           +K
Sbjct: 484 VK 485



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 145/280 (51%), Gaps = 3/280 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK--VDRA 293
           P ++ ++ L+  L K   +   I L ++M     I P+  T  +LI+  C   +  V  A
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQM-DLSNIRPNVYTLTILINCLCHSNRDHVHFA 125

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
              +  M   G  P    + TL+NG C + K+ +A ++FDE+      P  I YTT+I  
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+ G    AL+LLK+M+E+GCK D+V +N ++  LC++ +  EA+    ++   GI  N
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +L+  C  G+L +A  L + M+ R  +P+  T   L+  LCK GM  +A     
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + E G +P++ +++ L++  C   ++  A +L D +V K
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK 345


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 216/424 (50%), Gaps = 12/424 (2%)

Query: 91  FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHE 147
           +  N  T+ T++  L  + K     A++ +M    C+   F  G  +N +    +  L  
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFN 206
            +L+   K     + +  +   +T ++ L     V+ A N F +  N+ +R  PN   +N
Sbjct: 225 SLLKKMEK----GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR--PNVVTYN 278

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI+  C  G    A  +L +M + +++ PN++T+S LID   K G+  EA +L++EM+ 
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMI- 336

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  I PD  TY+ LI+GFC   ++D AK + E M +  C PNV  Y TL+ GFCK  +++
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           E  E+F EM    L  +T+ Y TLI    +AG  D A ++ K+M   G   DI+T++I+L
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 456

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+ GK+E+AL + E L    +  +  +Y I++   C+ G++E   +L   +  +G  
Sbjct: 457 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 516

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+      ++   C+ G+ E+A      + E G  P S ++  L+    R      + EL
Sbjct: 517 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 576

Query: 507 LDEL 510
           + E+
Sbjct: 577 IKEM 580



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 219/431 (50%), Gaps = 10/431 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T +++L+     K+     A++ QM     + +   F N + H     LH + 
Sbjct: 129 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF-NTLIH--GLFLHNKA 185

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    I  +     +P L    T +N L +   +DLA + LK   +  +++ +  I+  
Sbjct: 186 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYTT 244

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   C    +  A  +  EM    +  PN++TY++LI  LC  GR+ +A  L  +M+ +
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIR-PNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 303

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I P+ +T++ LID F + GK+  A+K+ + M     +P++F Y++L+NGFC   +L E
Sbjct: 304 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 362

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AK +F+ M +    P+ + Y TLI  FC+A RV+E +EL +EM +RG   + VT+N ++ 
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G  + A  + +K+  DG+  +  +Y I+L+  C+ G+LEKA+ +   +      P
Sbjct: 423 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 482

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N ++  +CKAG  ED       L   G KP    +  ++   CR      A  L 
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 542

Query: 508 DELVIKESGTI 518
            E+  KE GT+
Sbjct: 543 REM--KEDGTL 551



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 202/402 (50%), Gaps = 4/402 (0%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+++ L +    +   ++L++M     +    I+  ++    N       L +F ++
Sbjct: 206 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 265

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                 +P++   ++ +  L    +   A   L    +  ++ PN   F+ LI    K G
Sbjct: 266 DN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEG 323

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            L  A ++  EM K  +  P++ TYS+LI+G C + R  EA  +FE M+SKD   P+ +T
Sbjct: 324 KLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVT 381

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN LI GFC+  +V+   ++   M   G   N   Y TL+ G  + G    A+++F +M 
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +  + PD I Y+ L++  C+ G++++AL + + +++   + DI T+NI++ G+C+ GK+E
Sbjct: 442 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +   +   L   G+  N   Y  +++  C+KG  E+A  L R M   G LP+  T N L+
Sbjct: 502 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
               + G    +A  +  +   GF  ++ + ++++ ++  GR
Sbjct: 562 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 603



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 40/369 (10%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   +  L+ + + N+ DL  + L    Q+LR+  +   +NILI   C+R  L 
Sbjct: 58  SRPLPSIVEFNKLLSAIAKMNKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRSQLP 116

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A  VL +M K  + Y P+++T S+L++G C   R  EA+ L ++M    +  P+ +T+N
Sbjct: 117 LALAVLGKMMK--LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM-EYQPNTVTFN 173

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ------------ 326
            LI G     K   A  +++ M   GC P++F Y T++NG CK G +             
Sbjct: 174 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 233

Query: 327 -----------------------EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
                                  +A  +F EM N  ++P+ + Y +LI C C  GR  +A
Sbjct: 234 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 293

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             LL +M ER    ++VTF+ ++    +EGK+ EA  + +++    I  +  +Y  ++N 
Sbjct: 294 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 353

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C    L++A  +  LM+ +   P+  T N L+   CKA   E+       + + G    
Sbjct: 354 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 413

Query: 484 SDSWALLVE 492
           + ++  L++
Sbjct: 414 TVTYNTLIQ 422



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 190/364 (52%), Gaps = 13/364 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F T  + KG   N  TY +++  L  Y ++     +L  M       +   F  L+
Sbjct: 258 ALNLF-TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 316

Query: 138 KHFSNCSLHERVLEMFHKIHP--ITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
             F    + E  L    K++   I R   P +   S+ +N     +++D A++  +    
Sbjct: 317 DAF----VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 372

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
                PN   +N LIK  CK   +E   E+ +EM +  +   N +TY+TLI GL + G  
Sbjct: 373 K-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAGDC 430

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A ++F++MVS D + PD +TY++L+DG C+ GK+++A  + E+++ +   P+++ Y  
Sbjct: 431 DMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 489

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G CK GK+++  ++F  +    +KP+ I YTT+I+ FCR G  +EA  L +EMKE G
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA- 433
              +  T+N ++    R+G    +  +++++   G   + ++  +V+N     G LEK+ 
Sbjct: 550 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 608

Query: 434 IELL 437
           +E+L
Sbjct: 609 LEML 612



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 155/294 (52%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ A ++  EM +S+   P+++ ++ L+  + K  +F   I L E M +  +I  D  +Y
Sbjct: 45  LDDAVDLFGEMVQSR-PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL-RISYDLYSY 102

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N+LI+ FCR  ++  A  ++  M   G  P++   ++L+NG+C   ++ EA  + D+M  
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +P+T+ + TLI+      +  EA+ L+  M  RGC+ D+ T+  ++ GLC+ G I+ 
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +L+K+    I  +   Y  +++  C    +  A+ L   M  +G  P+  T N L+ 
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P   +++ L++   +  KL+ A +L DE++
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 75/155 (48%)

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           ++D+A++L  EM +      IV FN +L  + +  K +  + + E++    I  +  SY 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I++N  C++ +L  A+ +L  M+  G+ P   T + LL   C      +A   +  +  M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            ++P + ++  L+  +    K   A  L+D +V +
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 198


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 173/306 (56%), Gaps = 3/306 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P + A +  ++ L ++ +V+ A +F K   +   ++PN   +  L+   C  G    A 
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK-GIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L++M K +++ PN+ITYS L+D   KNG+  EA E+FEEMV +  I PD +TY+ LI+
Sbjct: 246 RLLRDMIKRKIT-PNVITYSALLDAFVKNGKVLEAKEIFEEMV-RMSIDPDIVTYSSLIN 303

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   ++D A ++ + M + GC P+V +Y TL+NGFCK  ++++  ++F +M    L  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVN 363

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +T+ Y TLI  F + G VD+A E   +M   G   DI T+NI+LGGLC  G +E+AL + 
Sbjct: 364 NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIF 423

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           E +    + L+  +Y  V+   C+ G++E A  L   +  +G  P   T   ++  LC  
Sbjct: 424 EDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 463 GMAEDA 468
           G+  + 
Sbjct: 484 GLQHEV 489



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 212/418 (50%), Gaps = 5/418 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F  + + + F  +   +  +L  + + KK++ V ++ ++M     +     F  ++
Sbjct: 69  AINLFREMVKTRPF-PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F  C      L +  K+  +  E P    I + +N     N+V  A + +      + 
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVD-KMVEIG 185

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +P+   +N +I   CK   +  A +  KE+ +  +  PN++TY+ L++GLC +GR+ +A
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIR-PNVVTYTALVNGLCNSGRWNDA 244

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L  +M+ K +I P+ +TY+ L+D F + GKV  AK+I E M     +P++  Y++L+N
Sbjct: 245 ARLLRDMI-KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C   ++ EA ++FD M +    PD + Y TLIN FC+A RV++ ++L ++M +RG   
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVN 363

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VT+N ++ G  + G +++A     ++   G+  +  +Y I+L   C  G LEKA+ + 
Sbjct: 364 NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIF 423

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
             M          T   ++  +CK G  EDA      L   G KP+  ++  ++  +C
Sbjct: 424 EDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 179/336 (53%), Gaps = 9/336 (2%)

Query: 181 QVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
           QV LA + L    + L+L  +P+      L+   C+R  +  A  ++ +M   ++ Y P+
Sbjct: 135 QVSLALSVL---GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM--VEIGYRPD 189

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+ +ID LCK  R  +A++ F+E + +  I P+ +TY  L++G C  G+ + A +++
Sbjct: 190 IVAYNAIIDSLCKTRRVNDALDFFKE-IGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M      PNV  Y+ L++ F K GK+ EAKE+F+EM    + PD + Y++LIN  C  
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            R+DEA ++   M  +GC  D+V++N ++ G C+  ++E+ + +  K+   G+  N  +Y
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++    Q G+++KA E    M   G  P   T N LL  LC  G+ E A +    + +
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                +  ++  +++ +C+  K+  A+ L   L +K
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLK 464



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 192/410 (46%), Gaps = 48/410 (11%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           +    V   D  V+   R   +++ A I  +   +    AL+ F  +  +KG   N  TY
Sbjct: 170 RVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIG-RKGIRPNVVTY 228

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
             +++ L    ++     +LR M                                     
Sbjct: 229 TALVNGLCNSGRWNDAARLLRDM------------------------------------- 251

Query: 159 ITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           I R+  P++   S  L+  +++ +V  A+   +     + + P+   ++ LI   C    
Sbjct: 252 IKRKITPNVITYSALLDAFVKNGKVLEAKEIFE-EMVRMSIDPDIVTYSSLINGLCLHDR 310

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           ++ A ++  ++  S+  +P++++Y+TLI+G CK  R  + ++LF +M S+  ++ + +TY
Sbjct: 311 IDEANQMF-DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKM-SQRGLVNNTVTY 368

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N LI GF + G VD+A++    M + G +P+++ Y  L+ G C  G L++A  +F++M+ 
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             +  D + YTT+I   C+ G+V++A  L   +  +G K DIVT+  ++ GLC +G   E
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
              +  K+  +G+  N +            G++  + EL++ ML  G+ P
Sbjct: 489 VEALYTKMKQEGLMKNDSM------LCLGDGDITISAELIKKMLSCGYAP 532



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 144/283 (50%), Gaps = 2/283 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L  A  + +EM K++  +P+++ ++ L+  + K  ++   I L ++M     I  D  T+
Sbjct: 66  LHDAINLFREMVKTR-PFPSIVDFNRLLSAIVKMKKYDVVISLGKKM-EVLGIRNDLYTF 123

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N++I+ FC   +V  A  ++  M   G  P+     +L+NGFC+  ++ +A  + D+M  
Sbjct: 124 NIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +PD + Y  +I+  C+  RV++AL+  KE+  +G + ++VT+  ++ GLC  G+  +
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L  +    I  N  +Y  +L+   + G++ +A E+   M+     P   T + L+ 
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
            LC     ++A      +V  G  P+  S+  L+   C+ +++
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRV 346



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 1/261 (0%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI LF EMV K +  P  + +N L+    +  K D    + + M+  G   +++ +
Sbjct: 65  KLHDAINLFREMV-KTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             ++N FC   ++  A  V  +M     +PD +   +L+N FCR  RV +A+ L+ +M E
Sbjct: 124 NIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + DIV +N I+  LC+  ++ +AL   +++   GI  N  +Y  ++N  C  G    
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  LLR M+ R   P+  T + LL    K G   +A      +V M   P+  +++ L+ 
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303

Query: 493 LICRGRKLLFAFELLDELVIK 513
            +C   ++  A ++ D +V K
Sbjct: 304 GLCLHDRIDEANQMFDLMVSK 324


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 216/424 (50%), Gaps = 12/424 (2%)

Query: 91  FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHE 147
           +  N  T+ T++  L  + K     A++ +M    C+   F  G  +N +    +  L  
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFN 206
            +L+   K     + +  +   +T ++ L     V+ A N F +  N+ +R  PN   +N
Sbjct: 241 SLLKKMEK----GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR--PNVVTYN 294

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI+  C  G    A  +L +M + +++ PN++T+S LID   K G+  EA +L++EM+ 
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMI- 352

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  I PD  TY+ LI+GFC   ++D AK + E M +  C PNV  Y TL+ GFCK  +++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           E  E+F EM    L  +T+ Y TLI    +AG  D A ++ K+M   G   DI+T++I+L
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+ GK+E+AL + E L    +  +  +Y I++   C+ G++E   +L   +  +G  
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+      ++   C+ G+ E+A      + E G  P S ++  L+    R      + EL
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592

Query: 507 LDEL 510
           + E+
Sbjct: 593 IKEM 596



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 219/431 (50%), Gaps = 10/431 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T +++L+     K+     A++ QM     + +   F N + H     LH + 
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF-NTLIH--GLFLHNKA 201

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    I  +     +P L    T +N L +   +DLA + LK   +  +++ +  I+  
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYTT 260

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   C    +  A  +  EM    +  PN++TY++LI  LC  GR+ +A  L  +M+ +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIR-PNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I P+ +T++ LID F + GK+  A+K+ + M     +P++F Y++L+NGFC   +L E
Sbjct: 320 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AK +F+ M +    P+ + Y TLI  FC+A RV+E +EL +EM +RG   + VT+N ++ 
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G  + A  + +K+  DG+  +  +Y I+L+  C+ G+LEKA+ +   +      P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N ++  +CKAG  ED       L   G KP    +  ++   CR      A  L 
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558

Query: 508 DELVIKESGTI 518
            E+  KE GT+
Sbjct: 559 REM--KEDGTL 567



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 202/402 (50%), Gaps = 4/402 (0%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+++ L +    +   ++L++M     +    I+  ++    N       L +F ++
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                 +P++   ++ +  L    +   A   L    +  ++ PN   F+ LI    K G
Sbjct: 282 DN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEG 339

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            L  A ++  EM K  +  P++ TYS+LI+G C + R  EA  +FE M+SKD   P+ +T
Sbjct: 340 KLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVT 397

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN LI GFC+  +V+   ++   M   G   N   Y TL+ G  + G    A+++F +M 
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +  + PD I Y+ L++  C+ G++++AL + + +++   + DI T+NI++ G+C+ GK+E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +   +   L   G+  N   Y  +++  C+KG  E+A  L R M   G LP+  T N L+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
               + G    +A  +  +   GF  ++ + ++++ ++  GR
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 40/369 (10%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   +  L+ + + N+ DL  + L    Q+LR+  +   +NILI   C+R  L 
Sbjct: 74  SRPLPSIVEFNKLLSAIAKMNKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRSQLP 132

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A  VL +M K  + Y P+++T S+L++G C   R  EA+ L ++M    +  P+ +T+N
Sbjct: 133 LALAVLGKMMK--LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM-EYQPNTVTFN 189

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ------------ 326
            LI G     K   A  +++ M   GC P++F Y T++NG CK G +             
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249

Query: 327 -----------------------EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
                                  +A  +F EM N  ++P+ + Y +LI C C  GR  +A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             LL +M ER    ++VTF+ ++    +EGK+ EA  + +++    I  +  +Y  ++N 
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C    L++A  +  LM+ +   P+  T N L+   CKA   E+       + + G    
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429

Query: 484 SDSWALLVE 492
           + ++  L++
Sbjct: 430 TVTYNTLIQ 438



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 190/364 (52%), Gaps = 13/364 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F T  + KG   N  TY +++  L  Y ++     +L  M       +   F  L+
Sbjct: 274 ALNLF-TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332

Query: 138 KHFSNCSLHERVLEMFHKIHP--ITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
             F    + E  L    K++   I R   P +   S+ +N     +++D A++  +    
Sbjct: 333 DAF----VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
                PN   +N LIK  CK   +E   E+ +EM +  +   N +TY+TLI GL + G  
Sbjct: 389 K-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAGDC 446

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A ++F++MVS D + PD +TY++L+DG C+ GK+++A  + E+++ +   P+++ Y  
Sbjct: 447 DMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G CK GK+++  ++F  +    +KP+ I YTT+I+ FCR G  +EA  L +EMKE G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA- 433
              +  T+N ++    R+G    +  +++++   G   + ++  +V+N     G LEK+ 
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 624

Query: 434 IELL 437
           +E+L
Sbjct: 625 LEML 628



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 155/294 (52%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ A ++  EM +S+   P+++ ++ L+  + K  +F   I L E M +  +I  D  +Y
Sbjct: 61  LDDAVDLFGEMVQSR-PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL-RISYDLYSY 118

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N+LI+ FCR  ++  A  ++  M   G  P++   ++L+NG+C   ++ EA  + D+M  
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +P+T+ + TLI+      +  EA+ L+  M  RGC+ D+ T+  ++ GLC+ G I+ 
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +L+K+    I  +   Y  +++  C    +  A+ L   M  +G  P+  T N L+ 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P   +++ L++   +  KL+ A +L DE++
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 75/155 (48%)

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           ++D+A++L  EM +      IV FN +L  + +  K +  + + E++    I  +  SY 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I++N  C++ +L  A+ +L  M+  G+ P   T + LL   C      +A   +  +  M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            ++P + ++  L+  +    K   A  L+D +V +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 167/309 (54%), Gaps = 5/309 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N+LI  +CK G +E A  VL  M  S    PN  TY  ++  LC  G+ ++A+++    
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRMGVS----PNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + + +  PD +T  VLID  C+   V +A K+   M+N GC P+V  Y  L+ GFCK G+
Sbjct: 208 L-QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGR 266

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA     ++ ++  +PD I +  ++   C  GR  +A++LL  M  +GC   +VTFNI
Sbjct: 267 LDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNI 326

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LC++G + +AL +LE +   G   N  S+  ++   C    +++AIE L +M+ RG
Sbjct: 327 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRG 386

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N LL  LCK G  +DA + L  L   G  P   S+  +++ + +  K   A 
Sbjct: 387 CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAV 446

Query: 505 ELLDELVIK 513
           ELL+E+  K
Sbjct: 447 ELLEEMCYK 455



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 191/382 (50%), Gaps = 45/382 (11%)

Query: 171 TCLNLLI----ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           T  N+LI    +S +++ A   L      + + PN   ++ ++   C RG L+ A +VL 
Sbjct: 150 TSYNVLISGYCKSGEIEEALRVL----DRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
              +S+  YP+++T + LID  CK     +A++LF EM +K    PD +TYNVLI GFC+
Sbjct: 206 RQLQSK-CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKG-CKPDVVTYNVLIKGFCK 263

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV--------------- 331
           GG++D A + ++ + + GC P+V ++  ++   C  G+  +A ++               
Sbjct: 264 GGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVT 323

Query: 332 FDEMKNFLLK--------------------PDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           F+ + NFL +                    P++  +  LI  FC    +D A+E L+ M 
Sbjct: 324 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
            RGC  DIVT+NI+L  LC++GK+++A+ +L +L   G   +  SY  V++   + G+ E
Sbjct: 384 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 443

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A+ELL  M  +G  P   T   ++  L + G   +A      L     +P +  +  ++
Sbjct: 444 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSII 503

Query: 492 ELICRGRKLLFAFELLDELVIK 513
             +C+ ++   A + L ++V K
Sbjct: 504 TGLCKSQQTSLAIDFLADMVAK 525



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 192/385 (49%), Gaps = 4/385 (1%)

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           V ++ G + N ATY  +L  L    K +    VL +     C         L+      S
Sbjct: 171 VLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKES 230

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
              + +++F+++      KP +   +  +    +  ++D A  FLK    +   +P+   
Sbjct: 231 GVGQAMKLFNEMRN-KGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSY-GCQPDVIS 288

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
            N++++  C  G    A ++L  M + +   P+++T++ LI+ LC+ G   +A+ + E M
Sbjct: 289 HNMILRSLCSGGRWMDAMKLLATMLR-KGCLPSVVTFNILINFLCQKGLLGKALNVLE-M 346

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K    P++ ++N LI GFC G  +DRA + +E M + GC P++  Y  L+   CK+GK
Sbjct: 347 MPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGK 406

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A  +  ++ +    P  I Y T+I+   + G+ + A+ELL+EM  +G K D++T   
Sbjct: 407 VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTS 466

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++GGL REGK+ EA+     L    I  N   Y  ++   C+  +   AI+ L  M+ +G
Sbjct: 467 VVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKG 526

Query: 445 FLPHYATSNELLVRLCKAGMAEDAA 469
             P  AT   L+  +   G+AEDA+
Sbjct: 527 CKPTEATYTTLIKGITYEGLAEDAS 551



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 33/296 (11%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L +NG   E     E M +K +  PD +    LI  FC+ G+   A +IM  ++ +G   
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKS-PDVIACTALIREFCKIGRTKNASQIMGILEESGAVI 147

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEM------------------------------KN 337
           +V +Y  L++G+CK G+++EA  V D M                              + 
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 338 FLLK--PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
              K  PD +  T LI+  C+   V +A++L  EM+ +GCK D+VT+N+++ G C+ G++
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA+  L+KL   G   +  S+ ++L   C  G    A++LL  ML +G LP   T N L
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC+ G+   A   L  + + G  P S S+  L++  C G+ +  A E L+ +V
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 130/247 (52%), Gaps = 2/247 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FNILI   C++G L  A  VL+ M K   + PN  +++ LI G C       AIE
Sbjct: 319 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT-PNSRSFNPLIQGFCNGKGIDRAIE 377

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             E MVS+    PD +TYN+L+   C+ GKVD A  I+  + + GC+P++ +Y T+++G 
Sbjct: 378 YLEIMVSRG-CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 436

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K GK + A E+ +EM    LKPD I  T+++    R G+V EA++    +K    + + 
Sbjct: 437 LKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNA 496

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N I+ GLC+  +   A+  L  +   G    +A+Y  ++     +G  E A +L   
Sbjct: 497 FIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNE 556

Query: 440 MLCRGFL 446
           +  RG +
Sbjct: 557 LYSRGLV 563



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 120/228 (52%), Gaps = 3/228 (1%)

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R G+++   + +E+M N G +P+V   T L+  FCK G+ + A ++   ++      D  
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  LI+ +C++G ++EAL +L  M   G   +  T++ +L  LC  GK+++A+ +L + 
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
                Y +  +  ++++ +C++  + +A++L   M  +G  P   T N L+   CK G  
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++A   L  L   G +P+  S  +++  +C G + + A +LL  ++ K
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRK 315


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 180/364 (49%), Gaps = 70/364 (19%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +N +I   C RG +++A ++++EM++     PN  TY T+I G CK GR  EA+
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD--------------------------- 291
           ++F+EM++K ++ P+A+ YN LI G+C  GK+D                           
Sbjct: 576 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 635

Query: 292 --------RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE--------------------- 322
                    A +++E M   G  P+VF Y  L+NG CKE                     
Sbjct: 636 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 695

Query: 323 --------------GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                         G++QE  ++FDE     ++PD + Y  LIN    +G +D A E++ 
Sbjct: 696 VVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 755

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM+++    D VT+N ++ GLC  G+++EA  +++++   GI  +  +Y  +++    KG
Sbjct: 756 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 815

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +++ A+ +   M+ +GF P   T N L+  LCK G  +DA   +  +VE G  P+  ++ 
Sbjct: 816 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 875

Query: 489 LLVE 492
            L+E
Sbjct: 876 SLIE 879



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 162/374 (43%), Gaps = 42/374 (11%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++   I+        Q AL+I   + E+ G   N  TY T++    +  + +   
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            V  +M  +     E +  N +     C   +    + ++   + R    +       NL
Sbjct: 576 KVFDEMLTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVER---GVAMTVATYNL 631

Query: 176 LIESNQVDLAQNFLKYSNQHLR---LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L+ +  +D          + +    L P+   +NILI  HCK G ++ A E+ + M +  
Sbjct: 632 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 691

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMV--------------------------- 265
           +    ++TY+ LI  L K G+ +E  +LF+E V                           
Sbjct: 692 VRA-TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 750

Query: 266 -------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                   K +I PD +TYN L+ G C  G+VD A+K+++ M   G  P++  Y TL++G
Sbjct: 751 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 810

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +  +G +++A  + +EM N    P  + Y  LI   C+ G+ D+A  ++KEM E G   D
Sbjct: 811 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 870

Query: 379 IVTFNIILGGLCRE 392
             T+  ++ GL  E
Sbjct: 871 DSTYISLIEGLTTE 884



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 6/182 (3%)

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +F +M    L   T  +  ++   C AG+   ALELL++M     + + VT+N ++ G C
Sbjct: 475 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFC 530

Query: 391 REGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PH 448
             G+++ AL ++ ++    GI  N+ +Y  V++  C+ G +++A+++   ML +G + P 
Sbjct: 531 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 590

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
               N L+   C  G  + A +    +VE G      ++ LLV  +    +   A+EL++
Sbjct: 591 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 650

Query: 509 EL 510
           E+
Sbjct: 651 EM 652


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 235/467 (50%), Gaps = 9/467 (1%)

Query: 27  ISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVS 86
           I PL  I A     + P+++       +   + +     +++I+ ++    AL+IF+   
Sbjct: 21  IVPLRFIFA----VETPLQSYTVTPPIKPWPQRLFPNRLVAMIRRQQNLDLALQIFHYAG 76

Query: 87  E-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           +    F HN  TY  I+ +L+R + FE V+++L ++        E +F+ +++ +   S 
Sbjct: 77  KYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASR 136

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            +  L+ F +I      + S+++++T LN L+++N+        KYS     + PN    
Sbjct: 137 PKMALKTFLRIQTFGVRR-SVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTC 195

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           NILIK  CK+  +E A +V  EM  S    PN++TY+T++ G    G    A  +F E+ 
Sbjct: 196 NILIKALCKKNDVEGARKVFDEMP-SMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELF 254

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
                LPDA TY +L+DG+ + G+   A K+M+ M+ NG  PN   Y  ++ G+CKE K 
Sbjct: 255 DHGW-LPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKS 313

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA  + ++M      P++     +I+  C  GRV EA ++ +++ ++ C  D    + +
Sbjct: 314 GEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTL 373

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +  LC+EG I EA  +  + +  G   +  +Y  ++   C+ GEL +A  L   ML +G 
Sbjct: 374 IHWLCKEGNIWEARKLFNE-FERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGC 432

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           +P+  T N L+    K G A++    +  +++ G      ++ +LVE
Sbjct: 433 VPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVE 479



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 145/274 (52%), Gaps = 1/274 (0%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           + +TL++ L +N RF     LF+   SK  ++P+  T N+LI   C+   V+ A+K+ + 
Sbjct: 158 SLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDE 217

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M + G  PNV  YTT++ G+   G +  AK VF E+ +    PD   YT L++ + + GR
Sbjct: 218 MPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGR 277

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             +A++++ EM+E G + + +T+ +I+ G C+E K  EAL +L  +       N A    
Sbjct: 278 FTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCK 337

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V++  C +G +++A ++   +L +   P  A ++ L+  LCK G   +A   LF   E G
Sbjct: 338 VIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEAR-KLFNEFERG 396

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                 ++  L+  +C   +L  A  L D+++ K
Sbjct: 397 TISSLLTYNTLIAGMCEMGELCEAARLWDDMLEK 430



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 110/240 (45%), Gaps = 1/240 (0%)

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TY+ +I    R    +  + ++  ++++G N +   + T++  +    + + A + F  +
Sbjct: 88  TYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRI 147

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGK 394
           + F ++       TL+N   +  R      L K  K + G   ++ T NI++  LC++  
Sbjct: 148 QTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKND 207

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +E A  + +++   GI  N  +Y  +L     +G++  A  +   +   G+LP   T   
Sbjct: 208 VEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTI 267

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L+    K G   DA   +  + E G +P   ++ +++   C+ RK   A  LL++++ K+
Sbjct: 268 LMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKK 327


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 187/319 (58%), Gaps = 2/319 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ PN   FN LI   C  G L+ A  +L EM  + ++ PN+ T++ LIDGLCK G  ++
Sbjct: 224 KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVN-PNVYTFNILIDGLCKEGEVKK 282

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +   M+ K  + P+ +TY  L+DG+    +V++AK +   +   G  PNV +Y+ ++
Sbjct: 283 ATSVLSVMI-KQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMI 341

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG CK   + EA ++F EM    + P+T+ Y++LI+  C++GR+ +  +L+ E+  RG  
Sbjct: 342 NGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQP 401

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           A+I+T+N +L GLC+  ++++A+ +L K+  +GI  + ++Y  +++  C+ G L+ A  +
Sbjct: 402 ANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRI 461

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + +LC+G+  +      ++  LCK G  ++A   L  + + G  P++ ++  L+  + +
Sbjct: 462 YQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFK 521

Query: 497 GRKLLFAFELLDELVIKES 515
             K   A +LL E++ +ES
Sbjct: 522 NNKNGKAVKLLREMIARES 540



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 175/354 (49%), Gaps = 38/354 (10%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +P+T   N L++  C  G ++ A      + + +  + + ++Y TLI+GLCK+G  R
Sbjct: 117 LGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRF-HLDQVSYGTLINGLCKSGETR 175

Query: 256 EAIE------------------------------------LFEEMVSKDQILPDALTYNV 279
            A++                                    L+ EM+ K +I P+ +T+N 
Sbjct: 176 AALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK-KIYPNVVTFNS 234

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI GFC  G++  A  ++  M  N  NPNV+ +  L++G CKEG++++A  V   M    
Sbjct: 235 LIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           ++P+ + YT+L++ +     V++A  +   +  RG   ++ ++++++ GLC+   ++EA+
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            + +++    +  N  +Y  +++  C+ G +    +L+  +  RG   +  T N LL  L
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           CK    + A   L  + + G +P+  ++  LV+ +C+  +L  A  +  +L+ K
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK 468



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 7/224 (3%)

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D        +  N   P +F +  +++   K    + A     +M+   ++P+   +  L
Sbjct: 35  DAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNIL 94

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           INCF    +++ A  ++ ++ + G + D VT N +L GLC  GK++EAL   + +     
Sbjct: 95  INCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRF 154

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLR----LMLCRGFLPHYATSNELLVRLCKAGMAE 466
           +L++ SY  ++N  C+ GE   A++LLR    L+L R   P       ++   CK  +  
Sbjct: 155 HLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVR---PDVIMYTAIIDSFCKDKLVI 211

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           DA      ++     P   ++  L+   C   +L  A  LL+E+
Sbjct: 212 DAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM 255



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 108/244 (44%), Gaps = 5/244 (2%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+  F  ++  +   P    +N ++    +      A    + M+  G  P +F +  L
Sbjct: 35  DAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNIL 94

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N F    +L  A  +  ++     +PDT+   TL+   C  G+V EAL     +  +  
Sbjct: 95  INCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRF 154

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS---YRIVLNFSCQKGELEK 432
             D V++  ++ GLC+ G+   AL +L K+  +G+ L +     Y  +++  C+   +  
Sbjct: 155 HLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVID 212

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A +L   M+ +   P+  T N L+   C  G  ++A   L  +      P   ++ +L++
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272

Query: 493 LICR 496
            +C+
Sbjct: 273 GLCK 276


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 192/343 (55%), Gaps = 8/343 (2%)

Query: 174 NLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           N+LI+      +VD A N L      + L+P+   +N L+   CK   ++ A E+ K M 
Sbjct: 47  NILIDGYAKKGRVDEA-NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA 105

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIE-LFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           +     P+++TYST+I GLCK G+  EA+E LF +M+ +     + + YN LI+G C+  
Sbjct: 106 EKGFE-PDVVTYSTIISGLCKTGKVTEALEMLFHKMIER-GCSANTVAYNALINGLCKDE 163

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            ++RA K++E M + G  P+   Y T+++G C+ GK+ EAK+ FD M +    PD + Y 
Sbjct: 164 NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 223

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            L++   + G+ DEA++L K++  +G   D VT+N IL GL R+  ++EA  M +K+   
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N A+Y IVL+  C+  +++ A ++L  M   G +P   T N LL  LCK  + + A
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                 +V+ G  P+  S+++++  +C+  K+  A  L D ++
Sbjct: 344 HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 386



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 162/277 (58%), Gaps = 2/277 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN  T+  ++   CK G+ R+  +LFE+M+  + I PD + YN+LIDG+ + G+VD A +
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLD-NGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + E M + G  P+++ Y +L+N FCKE K++EA E+F  M     +PD + Y+T+I+  C
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 356 RAGRVDEALELL-KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           + G+V EALE+L  +M ERGC A+ V +N ++ GLC++  IE A  +LE++   G   + 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +L+  C+ G++ +A +    M  RG+ P     N LL  L K G  ++A      
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           ++  G+ P++ ++  ++  + R   +  A E+  ++V
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 281



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 184/349 (52%), Gaps = 2/349 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +PS+   ++ LN   +  ++  A    K   +    +P+   ++ +I   CK G +  A 
Sbjct: 75  EPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK-GFEPDVVTYSTIISGLCKTGKVTEAL 133

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+L      +    N + Y+ LI+GLCK+     A +L EEM SK  + PD +TYN ++ 
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV-PDNITYNTILS 192

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G CR GKV  AK+  + M + G +P+V  Y  L++   KEGK  EA ++F ++      P
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMP 252

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           DT+ Y +++    R   +DEA E+ K+M   GC  +  T++I+L G CR  K+++A  +L
Sbjct: 253 DTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVL 312

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           E++   G   +  +Y I+L+  C+   ++KA EL   M+  G  P   + + +L  LCK 
Sbjct: 313 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 372

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
               DA +    ++E    P+  ++ +L++ +C+  KL  A +LLD++ 
Sbjct: 373 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 178/312 (57%), Gaps = 3/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   F +++K  CK+G L   +++ ++M  + +S P+ I Y+ LIDG  K GR  EA  
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGIS-PDGIEYNILIDGYAKKGRVDEANR 64

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+EEMVS   + P   TYN L++ FC+  K+  A ++ + M   G  P+V  Y+T+++G 
Sbjct: 65  LYEEMVSV-GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 320 CKEGKLQEAKE-VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           CK GK+ EA E +F +M       +T+ Y  LIN  C+   ++ A +LL+EM  +G   D
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            +T+N IL GLCR GK+ EA    + +   G   +  +Y  +L+   ++G+ ++A++L +
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            ++ +G++P   T N +L+ L +    ++A      +V  G  P   ++++++   CR +
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 499 KLLFAFELLDEL 510
           K+  A ++L+E+
Sbjct: 304 KVDDAHKVLEEM 315



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 204/425 (48%), Gaps = 36/425 (8%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +   Y  ++D  A+  + +  + +  +M     +     + +L+  F   +  +  
Sbjct: 38  GISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEA 97

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           +E+F  +     E P +   ST ++ L ++ +V  A   L +         NT  +N LI
Sbjct: 98  MELFKTMAEKGFE-PDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALI 156

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS--- 266
              CK   +E A+++L+EM  S+   P+ ITY+T++ GLC+ G+  EA + F+ M S   
Sbjct: 157 NGLCKDENIERAYKLLEEMA-SKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGY 215

Query: 267 ---------------------------KDQI----LPDALTYNVLIDGFCRGGKVDRAKK 295
                                      KD I    +PD +TYN ++ G  R   +D A++
Sbjct: 216 SPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 275

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M  +GC PN   Y+ +++G C+  K+ +A +V +EM      PD + Y  L++  C
Sbjct: 276 MFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLC 335

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +   VD+A EL   M + GC  DIV+++++L GLC+  K+ +A  + +++    +  +  
Sbjct: 336 KTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVV 395

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++ I+++  C+ G+L++A +LL  M C G  P Y   N L+  L K G    A      +
Sbjct: 396 TFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 455

Query: 476 VEMGF 480
            E GF
Sbjct: 456 KEKGF 460



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 191/371 (51%), Gaps = 8/371 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNL 136
           A+E+F T++E KGF  +  TY+TI+  L +  K  EA++ +  +M    C  +   +  L
Sbjct: 97  AMELFKTMAE-KGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNAL 155

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           +         ER  ++  ++       P     +T L+ L    +V  A+ F   S    
Sbjct: 156 INGLCKDENIERAYKLLEEMAS-KGYVPDNITYNTILSGLCRMGKVSEAKQFFD-SMPSR 213

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKE-MKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              P+   +N L+    K G  + A ++ K+ + K  M  P+ +TY++++ GL +     
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM--PDTVTYNSILLGLARKSNMD 271

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA E+F++MV+     P+  TY++++ G CR  KVD A K++E M   G  P+V  Y  L
Sbjct: 272 EAEEMFKKMVAS-GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 330

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CK   + +A E+F  M +    PD + Y+ ++N  C+  +V +A  L   M ER  
Sbjct: 331 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VTFNI++ GLC+ GK++EA  +L+++   G   +  +Y  ++N   ++G   +A  
Sbjct: 391 VPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADR 450

Query: 436 LLRLMLCRGFL 446
           L + M  +GFL
Sbjct: 451 LTQAMKEKGFL 461



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 140/243 (57%), Gaps = 1/243 (0%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+  T+ V++  FC+ GK+    K+ E M +NG +P+   Y  L++G+ K+G++ EA  +
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           ++EM +  L+P    Y +L+N FC+  ++ EA+EL K M E+G + D+VT++ I+ GLC+
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 392 EGKIEEALGML-EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
            GK+ EAL ML  K+   G   N  +Y  ++N  C+   +E+A +LL  M  +G++P   
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N +L  LC+ G   +A      +   G+ P+  ++  L++ + +  K   A +L  ++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 511 VIK 513
           + K
Sbjct: 246 IAK 248



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 4/291 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG+  +N TY TIL  L R  K          M           +  L+         +
Sbjct: 177 SKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTD 236

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             +++F  +        ++   S  L L  +SN  +  + F K         PN   ++I
Sbjct: 237 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGC--APNGATYSI 294

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++  HC+   ++ A +VL+EM K   + P+++TY+ L+DGLCK     +A ELF  MV  
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIG-AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD- 352

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           +   PD ++Y+V+++G C+  KV  A+ + + M      P+V  +  LM+G CK GKL E
Sbjct: 353 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 412

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           AK++ D+M      PD + Y TL+N   + GR  +A  L + MKE+G  +D
Sbjct: 413 AKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 70/135 (51%)

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           R C  +  TF ++L   C++GK+ +   + E++  +GI  +   Y I+++   +KG +++
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  L   M+  G  P   T N LL   CK    ++A      + E GF+P+  +++ ++ 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 493 LICRGRKLLFAFELL 507
            +C+  K+  A E+L
Sbjct: 122 GLCKTGKVTEALEML 136


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 210/421 (49%), Gaps = 44/421 (10%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKF-HEGIFLNLMKH-FSNCSLHERVLEMFHK 155
           ++ +L K+A+ K ++ V ++   M  E C   H+    N++ +    CS     L +  K
Sbjct: 72  FSKVLSKIAKSKNYDLVISLFHHM--EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +     E P +  +S+ +N   + N+V  A + +    + +  +P+  I+N +I   CK 
Sbjct: 130 MMKFGYE-PDVVTVSSLINGFCQGNRVFDAIDLVS-KMEEMGFRPDVVIYNTIIDGSCKI 187

Query: 216 GTLESAFEVLKEMKKS-----QMSY-----------------------------PNLITY 241
           G +  A E+   M++       ++Y                             PN+IT+
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           + +ID   K G+F EA++L+EEM ++  + PD  TYN LI+G C  G+VD AK++++ M 
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC P+V  Y TL+NGFCK  ++ E  ++F EM    L  DTI Y T+I  + +AGR D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A E+   M  R    +I T++I+L GLC   ++E+AL + E +    I L+  +Y IV+
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G +E A +L R + C+G  P   +   ++   C+    + + +    + E G  
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483

Query: 482 P 482
           P
Sbjct: 484 P 484



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 164/334 (49%), Gaps = 36/334 (10%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREA 257
           +P+    + LI   C+   +  A +++ +M+  +M + P+++ Y+T+IDG CK G   +A
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKME--EMGFRPDVVIYNTIIDGSCKIGLVNDA 193

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +ELF+ M  +D +  DA+TYN L+ G C  G+   A ++M  M      PNV  +T +++
Sbjct: 194 VELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            F KEGK  EA ++++EM    + PD   Y +LIN  C  GRVDEA ++L  M  +GC  
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT+N ++ G C+  +++E   +  ++   G+  +  +Y  ++    Q G  + A E+ 
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372

Query: 438 RLMLCRGFLPHYA--------------------------------TSNELLVRLCKAGMA 465
             M  R  +  Y+                                T N ++  +CK G  
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           EDA      L   G KP+  S+  ++   CR R+
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 142/256 (55%), Gaps = 1/256 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           +L +Y+ +I+ LC+  RF  A+ +  +M+ K    PD +T + LI+GFC+G +V  A  +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMM-KFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +  M+  G  P+V  Y T+++G CK G + +A E+FD M+   ++ D + Y +L+   C 
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           +GR  +A  L+++M  R    +++TF  ++    +EGK  EA+ + E++    +  +  +
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++N  C  G +++A ++L LM+ +G LP   T N L+   CK+   ++       + 
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341

Query: 477 EMGFKPESDSWALLVE 492
           + G   ++ ++  +++
Sbjct: 342 QRGLVGDTITYNTIIQ 357



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 149/299 (49%), Gaps = 12/299 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F+ + E+ G   +  TY +++  L    ++     ++R M       +   F  ++
Sbjct: 193 AVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             F         ++++ ++   TR    P +   ++ +N L    +VD A+  L      
Sbjct: 252 DVFVKEGKFSEAMKLYEEM---TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L P+   +N LI   CK   ++   ++ +EM +  +   + ITY+T+I G  + GR  
Sbjct: 309 GCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL-VGDTITYNTIIQGYFQAGRPD 366

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A E+F  M S+    P+  TY++L+ G C   +V++A  + E M+ +    ++  Y  +
Sbjct: 367 AAQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++G CK G +++A ++F  +    LKPD + YTT+I+ FCR  + D++  L ++M+E G
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 130/258 (50%), Gaps = 1/258 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E I+LF +M+ + + LP  + ++ ++    +    D    +   M+  G   ++++Y  +
Sbjct: 52  EEIDLFCKMI-QSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N  C+  +   A  V  +M  F  +PD +  ++LIN FC+  RV +A++L+ +M+E G 
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D+V +N I+ G C+ G + +A+ + +++  DG+  +  +Y  ++   C  G    A  
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+R M+ R  +P+  T   ++    K G   +A      +      P+  ++  L+  +C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290

Query: 496 RGRKLLFAFELLDELVIK 513
              ++  A ++LD +V K
Sbjct: 291 MHGRVDEAKQMLDLMVTK 308



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 93/191 (48%), Gaps = 2/191 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+E  ++F +M      P  + ++ +++   ++   D  + L   M+  G   D+ ++NI
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR  +   AL ++ K+   G   +  +   ++N  CQ   +  AI+L+  M   G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFA 503
           F P     N ++   CK G+  D A+ LF  +E  G + ++ ++  LV  +C   +   A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVND-AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 504 FELLDELVIKE 514
             L+ ++V+++
Sbjct: 229 ARLMRDMVMRD 239


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 190/335 (56%), Gaps = 7/335 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLES 220
           +P +   +T +N +    ++ +A   ++  N+ +R   +P+   +N LI   C  G    
Sbjct: 160 QPDVITFTTLINGVCNEGKIKVA---VELYNEMVRSGHEPDVISYNTLINGLCNSGNTNM 216

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  V K+M+++    PN++TY+T+ID LCK+    +A++   EMV +  I PDA+TYN +
Sbjct: 217 AVHVFKKMEQNGCK-PNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG-IPPDAITYNSI 274

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           + G C  G+++ A ++ + M+ NGC P+V  Y  +++   K+  + +A +   EM +  +
Sbjct: 275 VHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI 334

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            PD + YTT+++  C  G+++EA+ L K+M+++GCK D+V +N I+  LC++  + +A+ 
Sbjct: 335 PPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAME 394

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
            L ++   GI  N  +Y  +L+  C  G+L++A +L + M+ R  +P+  T + L+  LC
Sbjct: 395 FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC 454

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           + GM  +A      + E G +P   ++  L+   C
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYC 489



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 170/307 (55%), Gaps = 2/307 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
            NILI   C+   ++ A  V  +M K  +  P++IT++TLI+G+C  G+ + A+EL+ EM
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQ-PDVITFTTLINGVCNEGKIKVAVELYNEM 189

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V      PD ++YN LI+G C  G  + A  + + M+ NGC PNV  Y T+++  CK+  
Sbjct: 190 VRSGH-EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL 248

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A +   EM    + PD I Y ++++  C  G+++EA  L K M++ GCK D+VT+NI
Sbjct: 249 VNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           I+  L ++  + +A   L ++   GI  +  +Y  +L+  C  G+L +AI L + M  +G
Sbjct: 309 IIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG 368

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P     N ++  LCK  +  DA   L  +V+ G  P + +++ ++   C   +L  A 
Sbjct: 369 CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEAT 428

Query: 505 ELLDELV 511
           +L  E+V
Sbjct: 429 QLFKEMV 435



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 228/493 (46%), Gaps = 42/493 (8%)

Query: 36  NTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNN 95
           N  K    VE  +  V +      IS+   I+ +        A+ +F  + EQ G   N 
Sbjct: 175 NEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM-EQNGCKPNV 233

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC--SLHERVLEMF 153
            TY TI+D L + +        L +M        + I  N + H   C   L+E    +F
Sbjct: 234 VTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIP-PDAITYNSIVHGLCCLGQLNEAT-RLF 291

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK-------------YS-------- 192
            ++      KP +   +  ++ L +   V+ A +FL              Y+        
Sbjct: 292 KRMEQ-NGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCY 350

Query: 193 ----NQHLRL---------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
               N+ +RL         KP+   +N +I   CK   +  A E L EM    +  PN +
Sbjct: 351 LGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIP-PNAV 409

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TYST++ G C  G+  EA +LF+EMV ++ ++P+ LT+++L+DG C+ G V  A+ + E 
Sbjct: 410 TYSTILHGFCNLGQLDEATQLFKEMVGRN-VMPNTLTFSILVDGLCQEGMVSEARWVFET 468

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G  PN++ Y  LMNG+C   K+ EA++VF+ M      PD   Y  LIN +C + R
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +D+A  LL +M  +    + VT+N I+ GLC  G++ +A  + +K+   G+     +Y I
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +LN  C+ G L++A++L + M  +   P       L+  +   G  E A      L   G
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648

Query: 480 FKPESDSWALLVE 492
            +P   ++ ++++
Sbjct: 649 IQPPGRTYNVMIK 661



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 186/353 (52%), Gaps = 3/353 (0%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
            +P + + +T +N L  S   ++A +  K   Q+   KPN   +N +I   CK   +  A
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQN-GCKPNVVTYNTIIDSLCKDRLVNDA 252

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            + L EM    +  P+ ITY++++ GLC  G+  EA  LF+ M  ++   PD +TYN++I
Sbjct: 253 MDFLSEMVGRGIP-PDAITYNSIVHGLCCLGQLNEATRLFKRM-EQNGCKPDVVTYNIII 310

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D   +   V+ A   +  M + G  P+V  YTT+++G C  G+L EA  +F +M+    K
Sbjct: 311 DSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK 370

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + Y T+I+  C+   V++A+E L EM +RG   + VT++ IL G C  G+++EA  +
Sbjct: 371 PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQL 430

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            +++    +  N  ++ I+++  CQ+G + +A  +   M  +G  P+  T N L+   C 
Sbjct: 431 FKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCL 490

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
                +A      +V  G  P+  S+ +L+   C  R++  A  LL ++ +K+
Sbjct: 491 RCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 213/440 (48%), Gaps = 7/440 (1%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E + + A+E++N +  + G   +  +Y T+++ L           V ++M    CK +  
Sbjct: 176 EGKIKVAVELYNEMV-RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVV 234

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLK 190
            +  ++       L    ++   ++  + R   P     ++ ++ L    Q++ A    K
Sbjct: 235 TYNTIIDSLCKDRLVNDAMDFLSEM--VGRGIPPDAITYNSIVHGLCCLGQLNEATRLFK 292

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
              Q+   KP+   +NI+I    K   +  A + L EM    +  P+++TY+T++ GLC 
Sbjct: 293 RMEQN-GCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP-PDVVTYTTILHGLCY 350

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G+  EAI LF++M  K    PD + YN +ID  C+   V+ A + +  M + G  PN  
Sbjct: 351 LGQLNEAIRLFKKMEQKG-CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAV 409

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y+T+++GFC  G+L EA ++F EM    + P+T+ ++ L++  C+ G V EA  + + M
Sbjct: 410 TYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETM 469

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            E+G + +I T+N ++ G C   K+ EA  + E +   G   +  SY I++N  C    +
Sbjct: 470 TEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRM 529

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           +KA  LL  M  +   P+  T N ++  LC  G   DA      +   G  P   ++++L
Sbjct: 530 DKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSIL 589

Query: 491 VELICRGRKLLFAFELLDEL 510
           +  +C+   L  A +L   +
Sbjct: 590 LNGLCKHGHLDEALKLFKSM 609



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 192/398 (48%), Gaps = 22/398 (5%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +  +D+  + R ++  A                 F +    +G   +  TY TI
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAAD----------------FLSEMVDQGIPPDVVTYTTI 344

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           L  L    +      + ++M  + CK     +  ++       L    +E   ++  + R
Sbjct: 345 LHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM--VDR 402

Query: 162 E-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
              P+    ST L+      Q+D A    K       + PNT  F+IL+   C+ G +  
Sbjct: 403 GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR-NVMPNTLTFSILVDGLCQEGMVSE 461

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  V + M +  +  PN+ TY+ L++G C   +  EA ++FE MV K    PD  +YN+L
Sbjct: 462 ARWVFETMTEKGVE-PNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG-CAPDLHSYNIL 519

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I+G+C   ++D+AK ++  M      PN   Y T+M G C  G+L +A+E+F +M +  +
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGM 579

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P  + Y+ L+N  C+ G +DEAL+L K MKE+  + DI+ + I++ G+   GK+E A G
Sbjct: 580 LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG 639

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +  KL  DGI     +Y +++    ++G  ++A EL R
Sbjct: 640 LFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 2/172 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +NILI  +C    ++ A  +L +M   +++ PN +TY+T++ GLC  GR  +A E
Sbjct: 511 PDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLT-PNTVTYNTIMKGLCYVGRLLDAQE 569

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF++M S   +LP  +TY++L++G C+ G +D A K+ + MK     P++  YT L+ G 
Sbjct: 570 LFKKMCSSG-MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGM 628

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
              GKL+ AK +F ++    ++P    Y  +I    + G  DEA EL ++ K
Sbjct: 629 FIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWK 680



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 107/208 (51%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G    V++   L+N  C+   +  A  V+ +M    ++PD I +TTLIN  C  G++  A
Sbjct: 123 GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVA 182

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           +EL  EM   G + D++++N ++ GLC  G    A+ + +K+  +G   N  +Y  +++ 
Sbjct: 183 VELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+   +  A++ L  M+ RG  P   T N ++  LC  G   +A      + + G KP+
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             ++ ++++ + + R +  A + L E+V
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMV 330



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 89/189 (47%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++  +   +    K  +      + ++M  F +         LINC CR   VD A+ +
Sbjct: 91  PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             +M + G + D++TF  ++ G+C EGKI+ A+ +  ++   G   +  SY  ++N  C 
Sbjct: 151 WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G    A+ + + M   G  P+  T N ++  LCK  +  DA   L  +V  G  P++ +
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270

Query: 487 WALLVELIC 495
           +  +V  +C
Sbjct: 271 YNSIVHGLC 279



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 86/187 (45%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F  M     +P  + +   +    +  +    + L  +M   G    + + NI
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR   ++ A+ +  K++  GI  +  ++  ++N  C +G+++ A+EL   M+  G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   + N L+  LC +G    A      + + G KP   ++  +++ +C+ R +  A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 505 ELLDELV 511
           + L E+V
Sbjct: 254 DFLSEMV 260


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 191/347 (55%), Gaps = 6/347 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           K SL + +  L+ L++ N++   +   K   +  R+  N   FNI I   C+ G L  A 
Sbjct: 162 KLSLTSCNPLLSALVKENKIGDVEYVYKEMIKR-RIHTNLNTFNIFINGLCRAGKLNKAE 220

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNG---RFREAIELFEEMVSKDQILPDALTYNV 279
           + +++MK   +S PN++TY+TL+DG CK G   +  +A    +EM++ ++I P+ +T+N 
Sbjct: 221 DAIEDMKAWGIS-PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA-NKICPNEVTFNT 278

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LIDGFC+   V  AKK  E M+  G  PN+  Y +L+NG C  GKL+EA +++D+M    
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           LKP+ + Y  LIN FC+   + EA ++  ++ ++    +++TFN ++   C+EG +EE  
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +   +  +GI  N ++Y  ++   C+K +L+ A ELL  M  +G      T N L+  L
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           CK   + +A   L  +  +G KP   ++  L++  C   KL  A  +
Sbjct: 459 CKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 167/299 (55%), Gaps = 3/299 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN LI   CK   + +A +  +EM+K  +  PN++TY++LI+GLC NG+  EAI+
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK-PNIVTYNSLINGLCNNGKLEEAID 329

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+++MV    + P+ +TYN LI+GFC+   +  A K+ + +      PNV  + T+++ +
Sbjct: 330 LWDKMVGLG-LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG ++E   +   M +  + P+   Y  LI   CR   +  A ELL EM+ +G K D+
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+NI++ GLC+  K   A  +L +++  G+  N  +Y  +++  C +G+L+ A+ +   
Sbjct: 449 VTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTR 508

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL-VELICRG 497
           M      P+  T N L+   CK    E A   L  ++E G  P   ++ ++ +E++ +G
Sbjct: 509 MEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 158/285 (55%), Gaps = 2/285 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q   LKPN   +N LI   C  G LE A ++  +M    +  PN++TY+ LI+G CK   
Sbjct: 300 QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLK-PNIVTYNALINGFCKKKM 358

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            +EA ++F++ VSK +++P+ +T+N +ID +C+ G ++    +   M + G  PNV  Y 
Sbjct: 359 MKEATKVFDD-VSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYN 417

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G C++  LQ AKE+ +EM+N  LK D + Y  LI+  C+  +   A +LL EM   
Sbjct: 418 CLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNL 477

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K + VT+N ++ G C EGK++ AL +  ++  +    N  +Y +++   C+  +LE A
Sbjct: 478 GLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAA 537

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
             LL  ML +G  P+  T + + + + + G + D    L+ +  M
Sbjct: 538 NGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEGHLYNISSM 582



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 181/326 (55%), Gaps = 7/326 (2%)

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           F +  +   +L   +C  N L+    K   +     V KEM K ++ + NL T++  I+G
Sbjct: 153 FTRAKDYGFKLSLTSC--NPLLSALVKENKIGDVEYVYKEMIKRRI-HTNLNTFNIFING 209

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR---GGKVDRAKKIMEFMKNNG 304
           LC+ G+  +A +  E+M +   I P+ +TYN L+DG+C+    GK+ +A+  M+ M  N 
Sbjct: 210 LCRAGKLNKAEDAIEDMKAWG-ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             PN   + TL++GFCK+  +  AK+ F+EM+   LKP+ + Y +LIN  C  G+++EA+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +L  +M   G K +IVT+N ++ G C++  ++EA  + + +    +  N  ++  +++  
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C++G +E+   L   ML  G LP+ +T N L+  LC+    + A   L  +   G K + 
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
            ++ +L++ +C+  K   A +LL+E+
Sbjct: 449 VTYNILIDGLCKNDKSRNAEKLLNEM 474



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 188/424 (44%), Gaps = 69/424 (16%)

Query: 149 VLEMFHKIHPITREKPSLKAI--STCLNLLIESN-QVDLAQNFLKYSNQHLRL----KPN 201
           + E+  K H  +  KP L+    +T L+ L+ +    +L   F K+S +  RL    +P 
Sbjct: 23  ISELLSKQH-WSELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPT 81

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG-------------- 247
           + + + L   + KR +   +F  L    K++    + + +S L+DG              
Sbjct: 82  SKVLHFLA--NSKRYSKVRSF--LDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLV 137

Query: 248 --LCKNGRFREAIELFEEMVSKDQILPDALTY-NVLIDGFCRGGKVDRAKKIMEFMKNNG 304
               KN     A E F    +KD     +LT  N L+    +  K+   + + + M    
Sbjct: 138 LAYVKNLELHCAYEAFTR--AKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR---AGRVD 361
            + N+  +   +NG C+ GKL +A++  ++MK + + P+ + Y TL++ +C+   AG++ 
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           +A   +KEM       + VTFN ++ G C++  +  A    E++   G+  N  +Y  ++
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA------------ 469
           N  C  G+LE+AI+L   M+  G  P+  T N L+   CK  M ++A             
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375

Query: 470 --IALF----------GLVEMGFK-----------PESDSWALLVELICRGRKLLFAFEL 506
             +  F          G++E GF            P   ++  L+  +CR + L  A EL
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435

Query: 507 LDEL 510
           L+E+
Sbjct: 436 LNEM 439



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 27/256 (10%)

Query: 36  NTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNN 95
           N  K +  ++  D  V    +   +++ A I+    +K  + A ++F+ VS+Q+    N 
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE-LVPNV 378

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH--------E 147
            T+ T++D   +    E   ++   M        EGI  N+  +  NC +         +
Sbjct: 379 ITFNTMIDAYCKEGMMEEGFSLCSSM------LDEGILPNVSTY--NCLIAGLCRKQDLQ 430

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQ--HLRLKPNTCI 204
              E+ +++     E   LK      N+LI+   + D ++N  K  N+  +L LKPN   
Sbjct: 431 AAKELLNEM-----ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVT 485

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+  +C  G L++A  V   M+K +   PN++TY+ LI G CK  +   A  L  EM
Sbjct: 486 YNTLMDGYCMEGKLKAALNVRTRMEKER-KQPNVVTYNVLIKGYCKINKLEAANGLLNEM 544

Query: 265 VSKDQILPDALTYNVL 280
           + K  + P+  TY+++
Sbjct: 545 LEKG-LNPNRTTYDIV 559


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 235/507 (46%), Gaps = 53/507 (10%)

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQ-KGFNHNNATYATILDKLARYKKFEAVDA 116
           R  S      L KC +  Q      ++++     F H+  +++ ++  L R ++     A
Sbjct: 198 RLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQA 257

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK------------- 163
           V+ +M  ++      I  +L+  + NC  +  V ++  + +   R+              
Sbjct: 258 VILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK 317

Query: 164 ---PSLKAISTCLNLLIESNQVDLAQNFLK-----------YS----------NQHLR-- 197
               S+ A ++ L  L++   VDLA    +           Y+          NQ +   
Sbjct: 318 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 377

Query: 198 -----------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
                      + P+   +N LI  +C++G LE AFE++  M    +  P + TY+ +I+
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK-PCVFTYNAIIN 436

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           GLCK G++  A  + +EM+ K  + PD  TYN+L+   CR   +  A++I + M + G  
Sbjct: 437 GLCKTGKYLRAKGVLDEML-KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 495

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ +++ L+    K G L +A + F +MKN  L PD + YT LI  FCR G + EAL++
Sbjct: 496 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 555

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             EM E+GC  D+VT+N IL GLC+E  + EA  +  ++   G++ +  ++  ++N   +
Sbjct: 556 RDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXK 615

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G + KA+ L  +M+ R   P   T N L+   CK    E        ++     P   S
Sbjct: 616 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 675

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           + +L+   C    +  AF L DE+V K
Sbjct: 676 YGILINGYCNMGCVSEAFRLWDEMVEK 702



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 219/439 (49%), Gaps = 15/439 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGI 132
           A E+ +++S  KG      TY  I++ L +  K+     VL +M     + +T  ++  I
Sbjct: 412 AFELMDSMS-GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN--I 468

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
            L       N    ER+ +      P     P L + S  + LL ++  +D A  + +  
Sbjct: 469 LLVECCRNDNMMDAERIFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR-D 523

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            ++  L P+  I+ ILI   C+ G +  A +V  EM + Q    +++TY+T+++GLCK  
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCXLDVVTYNTILNGLCKEK 582

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              EA ELF EM  +  + PD  T+  LI+G+ + G +++A  + E M      P+V  Y
Sbjct: 583 MLSEADELFTEMTERG-VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTY 641

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            TL++GFCK  ++++  E++++M +  + P+ I Y  LIN +C  G V EA  L  EM E
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G +A I+T N I+ G CR G   +A   L  +   GI  +  +Y  ++N   ++  +++
Sbjct: 702 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 761

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  L+  M   G LP   T N +L    + G  ++A + +  ++E G  P+  ++  L+ 
Sbjct: 762 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 821

Query: 493 LICRGRKLLFAFELLDELV 511
                  L  AF + DE++
Sbjct: 822 GHVTQNNLKEAFRVHDEML 840



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 15/438 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN-L 136
           A EI+  V  + G   N  T   +++ L + +K E   + L  M  E   F + +  N L
Sbjct: 342 AWEIYQEVV-RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTL 399

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           +  +    L E   E+   +      KP +   +  +N L ++ +   A+  L      +
Sbjct: 400 INAYCRQGLLEEAFELMDSMSG-KGLKPCVFTYNAIINGLCKTGKYLRAKGVLD-EMLKI 457

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+T  +NIL+   C+   +  A  +  EM  SQ   P+L+++S LI  L KNG   +
Sbjct: 458 GMSPDTATYNILLVECCRNDNMMDAERIFDEMP-SQGVVPDLVSFSALIGLLSKNGCLDQ 516

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A++ F +M +   + PD + Y +LI GFCR G +  A K+ + M   GC  +V  Y T++
Sbjct: 517 ALKYFRDMKNAG-LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTIL 575

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG CKE  L EA E+F EM    + PD   +TTLIN + + G +++A+ L + M +R  K
Sbjct: 576 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLK 635

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GIYLNKASYRIVLNFSCQKGELEK 432
            D+VT+N ++ G C+  ++E+    + +LW D     IY N  SY I++N  C  G + +
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEK----VNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 691

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  L   M+ +GF     T N ++   C+AG A  A   L  ++  G  P+  ++  L+ 
Sbjct: 692 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751

Query: 493 LICRGRKLLFAFELLDEL 510
              +   +  AF L++++
Sbjct: 752 GFIKEENMDRAFALVNKM 769



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 149/302 (49%), Gaps = 7/302 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ + + EQ G   +  TY TIL+ L + K     D +  +MT          F  L+
Sbjct: 552 ALKVRDEMLEQ-GCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 610

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
             +       + + +F  +  I R  KP +   +T ++   + ++++   N L       
Sbjct: 611 NGYXKDGNMNKAVTLFEMM--IQRNLKPDVVTYNTLIDGFCKGSEMEKV-NELWNDMISR 667

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ PN   + ILI  +C  G +  AF +  EM +       +IT +T++ G C+ G   +
Sbjct: 668 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE-ATIITCNTIVKGYCRAGNAVK 726

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A E    M+ K  I+PD +TYN LI+GF +   +DRA  ++  M+N+G  P+V  Y  ++
Sbjct: 727 ADEFLSNMLLKG-IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 785

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NGF ++G++QEA+ +  +M    + PD   YT+LIN       + EA  +  EM +RG  
Sbjct: 786 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 845

Query: 377 AD 378
            D
Sbjct: 846 PD 847


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 176/300 (58%), Gaps = 3/300 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +  L  +   +     L   ++H    P+  ++  +I   CK G LE A E
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L  M    +  PN++ Y+T++ GLC   R++EA EL  EM  KD  L D +T+N+L+D 
Sbjct: 308 ILNRMPSYGLK-PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL-DDVTFNILVDF 365

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+ G VDR  +++E M ++GC P+V  YTT++NGFCKEG + EA  +   M +   KP+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ YT ++   C AGR  +A EL+ +M ++GC  + VTFN ++  LC++G +E+A+ +L+
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  +G   +  SY  V++   + G+ E+A+ELL +M+ +G  P+    + +   L + G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 203/436 (46%), Gaps = 40/436 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+ + +S  KG       Y  IL+   R   F     VL  M  + C    G      
Sbjct: 130 ALEVLDEMS-FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTG------ 182

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               NC+L                           LN + E   VD A   L+       
Sbjct: 183 ----NCNL--------------------------VLNAICEQGCVDEAVGLLR-KLAFFG 211

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            + +   +N ++K  C         E++ EM +   + PN++T++TLI  LC+NG F   
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA-PNIVTFNTLIGYLCRNGLFERV 270

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+  +M S+    PD   Y  +IDG C+ G ++ A +I+  M + G  PNV  Y T++ 
Sbjct: 271 HEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C   + +EA+E+  EM       D + +  L++ FC+ G VD  +ELL++M   GC  
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D++T+  ++ G C+EG I+EA+ +L+ +   G   N  SY IVL   C  G    A EL+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ +G  P+  T N L+  LCK G+ E A   L  ++  G  P+  S++ +++ + + 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 498 RKLLFAFELLDELVIK 513
            K   A ELL+ +V K
Sbjct: 510 GKTEEALELLNVMVNK 525



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 173/322 (53%), Gaps = 5/322 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN LI + C+ G  E   EVL +M +   + P++  Y+T+IDG+CK G    A E
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT-PDIRMYATIIDGICKEGHLEVANE 307

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M S   + P+ + YN ++ G C   +   A++++  M    C  +   +  L++ F
Sbjct: 308 ILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G +    E+ ++M +    PD I YTT+IN FC+ G +DEA+ LLK M   GCK + 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++ I+L GLC  G+  +A  ++ ++   G   N  ++  ++NF C+KG +E+AIELL+ 
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
           ML  G  P   + + ++  L KAG  E+A   L  +V  G  P +  ++ +   + R GR
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 499 --KLLFAFELLDELVIKESGTI 518
             K++  F+ + +  I+    +
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVL 568



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 203/416 (48%), Gaps = 43/416 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  +Y  +L  L   K++  V+ ++ +M    C  +   F  L+ +     L ERV
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E+  ++  H  T   P ++  +T ++ + +   +++A   L     +  LKPN   +N 
Sbjct: 271 HEVLAQMSEHGCT---PDIRMYATIIDGICKEGHLEVANEILNRMPSY-GLKPNVVCYNT 326

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++K  C     + A E+L EM +      + +T++ L+D  C+NG     IEL E+M+S 
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              +PD +TY  +I+GFC+ G +D A  +++ M + GC PN  +YT ++ G C  G+  +
Sbjct: 386 G-CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444

Query: 328 AKEV---------------FDEMKNFLLK--------------------PDTIGYTTLIN 352
           A+E+               F+ + NFL K                    PD I Y+T+I+
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 504

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              +AG+ +EALELL  M  +G   + + ++ I   L REG++ + + M + +    I  
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS 564

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +   Y  V++  C++ E ++AI+    M+  G +P+ +T   L+  L   G+A++A
Sbjct: 565 DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 37/349 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFRE 256
           + PN   F  +++  C RG +  A EVL EM  K     P +  Y  +++  C++G FR 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM--YHVILEAACRSGGFRN 164

Query: 257 AIELFEEMVSKDQIL----------------------------------PDALTYNVLID 282
           ++ + E M +K   L                                   D ++YN ++ 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   +    +++M+ M    C PN+  + TL+   C+ G  +   EV  +M      P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y T+I+  C+ G ++ A E+L  M   G K ++V +N +L GLC   + +EA  +L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +++     L+  ++ I+++F CQ G +++ IELL  ML  G +P   T   ++   CK 
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G+ ++A + L  +   G KP + S+ ++++ +C   + + A EL+ +++
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 196/383 (51%), Gaps = 18/383 (4%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E+   +SE  G   +   YATI+D + +    E  + +L +M     K +   +  ++K 
Sbjct: 272 EVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330

Query: 140 FSNCS----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             +        E + EMF K  P+     ++     C N L++   ++L +  L +    
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD-RVIELLEQMLSHG--- 386

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+   +  +I   CK G ++ A  +LK M       PN ++Y+ ++ GLC  GR+ 
Sbjct: 387 --CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK-PNTVSYTIVLKGLCSAGRWV 443

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A EL  +M+ +    P+ +T+N LI+  C+ G V++A ++++ M  NGC+P++ +Y+T+
Sbjct: 444 DAEELMSQMIQQG-CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G  K GK +EA E+ + M N  + P+TI Y+++     R GRV++ +++   +K+   
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           ++D V +N ++  LC+  + + A+     +  +G   N+++Y +++     +G  ++A E
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622

Query: 436 LLRLMLCRG-----FLPHYATSN 453
           LL  +  RG      + H+  SN
Sbjct: 623 LLSELCSRGALRKHLMRHFGISN 645



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 150/307 (48%), Gaps = 5/307 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++  +C+ G L +A  +   +       PN  T+  ++ GLC  GR  +A+E+ +EM
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K    P    Y+V+++  CR G    + +++E M   GC  +  N   ++N  C++G 
Sbjct: 138 SFKG-CAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  +  ++  F  + D + Y  ++   C A R  +  EL+ EM    C  +IVTFN 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++G LCR G  E    +L ++   G   +   Y  +++  C++G LE A E+L  M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+    N +L  LC A   ++A   L  + +     +  ++ +LV+  C+   +    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 505 ELLDELV 511
           ELL++++
Sbjct: 377 ELLEQML 383



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 10/280 (3%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+ ++ G C+ G+   A  L   +     + P+A T+  ++ G C  G++  A +++
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV----PVPPNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   GC P    Y  ++   C+ G  + +  V + M       DT     ++N  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLC---REGKIEEALGMLEKLWYDGIYLNK 414
           G VDEA+ LL+++   GC+ADIV++N +L GLC   R G +EE   +++++       N 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEE---LMDEMVRVDCAPNI 251

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            ++  ++ + C+ G  E+  E+L  M   G  P       ++  +CK G  E A   L  
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +   G KP    +  +++ +C   +   A ELL E+  K+
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 29/192 (15%)

Query: 349 TLINCFCRAGRV------------DEALELLKEMKERGCKA-----------------DI 379
            LI   C AGR                +     M    C+A                 + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TF  ++ GLC  G+I +AL +L+++ + G       Y ++L  +C+ G    ++ +L  
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +G        N +L  +C+ G  ++A   L  L   G + +  S+  +++ +C  ++
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 500 LLFAFELLDELV 511
                EL+DE+V
Sbjct: 232 WGDVEELMDEMV 243


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 170/319 (53%), Gaps = 5/319 (1%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-----PNLITYSTLIDGLCKN 251
           +++P+   F IL+ H CK   ++ A +V   ++    S      P+++ ++TLIDGLCK 
Sbjct: 311 KIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKV 370

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+  + + L EEM   +   P+ +TYN LIDGF + G  DRA ++   M   G  PNV  
Sbjct: 371 GKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVIT 430

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             TL++G CK G++  A E F+EMK   LK +   YT LI+ FC    ++ A++  +EM 
Sbjct: 431 LNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEML 490

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
             GC  D V +  ++ GLC  G++ +A  ++ KL   G  L+++ Y ++++  C+K +LE
Sbjct: 491 SSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLE 550

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +  ELL  M   G  P   T N L+  L K G    A+  +  +++ G +P   ++  ++
Sbjct: 551 RVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAII 610

Query: 492 ELICRGRKLLFAFELLDEL 510
              C  + +    ++  E+
Sbjct: 611 HAYCSKKNVDEGMKIFGEM 629



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 171/315 (54%), Gaps = 5/315 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PNT  +N LI    K G  + A E+ ++M +  +  PN+IT +TL+DGLCK+GR   A+
Sbjct: 390 RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQ-PNVITLNTLVDGLCKHGRVHRAV 448

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E F EM  K  +  +A TY  LI  FC    ++RA +  E M ++GC+P+   Y +L++G
Sbjct: 449 EFFNEMKGKG-LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISG 507

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C  G++ +A  V  ++K      D   Y  LI+ FC+  +++   ELL EM+E G K D
Sbjct: 508 LCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPD 567

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            +T+N ++  L + G    A  ++EK+  +G+  +  +Y  +++  C K  +++ +++  
Sbjct: 568 TITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFG 627

Query: 439 LMLCRGFL-PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            M     + P+    N L+  LC+    + A   +  +     +P + ++  +++ + R 
Sbjct: 628 EMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGV-RD 686

Query: 498 RKLLF-AFELLDELV 511
           +K+L  AFEL+D +V
Sbjct: 687 KKMLHKAFELMDRMV 701



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 179/408 (43%), Gaps = 77/408 (18%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFL-----KYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           +PS+      +N L ++ ++D A         K  +  + ++P+  +FN LI   CK G 
Sbjct: 313 RPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGK 372

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            E    +L+EMK   ++ PN +TY+ LIDG  K G F  A ELF +M +++ + P+ +T 
Sbjct: 373 EEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQM-NEEGVQPNVITL 431

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N L+DG C+ G+V RA +    MK  G   N   YT L++ FC    +  A + F+EM +
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEA---------------------------------- 363
               PD + Y +LI+  C AGR+++A                                  
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLER 551

Query: 364 -LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG------------- 409
             ELL EM+E G K D +T+N ++  L + G    A  ++EK+  +G             
Sbjct: 552 VYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIH 611

Query: 410 -----------------------IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
                                  +  N   Y I+++  C+  ++++AI L+  M  +   
Sbjct: 612 AYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVR 671

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           P+  T N +L  +    M   A   +  +VE   +P+  +  +L E +
Sbjct: 672 PNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 174/397 (43%), Gaps = 46/397 (11%)

Query: 78  ALEIFNTVSEQKGFNH-----NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           AL++F+ +  + G N      +   + T++D L +  K E   ++L +M          +
Sbjct: 335 ALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTV 394

Query: 133 FLN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
             N L+  F      +R  E+F +++     +P++  ++T ++ L +  +V  A  F   
Sbjct: 395 TYNCLIDGFFKAGNFDRAHELFRQMNE-EGVQPNVITLNTLVDGLCKHGRVHRAVEFFN- 452

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +   LK N   +  LI   C    +  A +  +EM  S  S P+ + Y +LI GLC  
Sbjct: 453 EMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCS-PDAVVYYSLISGLCIA 511

Query: 252 GRFREA-----------------------------------IELFEEMVSKDQILPDALT 276
           GR  +A                                    EL  EM  +  + PD +T
Sbjct: 512 GRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEM-EETGVKPDTIT 570

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM- 335
           YN LI    + G    A K+ME M   G  P+V  Y  +++ +C +  + E  ++F EM 
Sbjct: 571 YNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMC 630

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
               + P+T+ Y  LI+  CR   VD A+ L+++MK +  + +  T+N IL G+  +  +
Sbjct: 631 STSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKML 690

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            +A  +++++  +    +  +  ++  +    GE+EK
Sbjct: 691 HKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 165/390 (42%), Gaps = 21/390 (5%)

Query: 134 LNLMKHFSNCSLHERVLEMFHK-IHPITREKP-SLKAISTCLNLLIESNQVDLAQNFLKY 191
           L L     N   H   L  F K  HP     P S   +  CL      N   L  N L  
Sbjct: 110 LELASRHPNSQTHLLSLHRFRKSTHPTLPLTPKSASLLLQCLENARLVNDSLLLFNQLDP 169

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           S++     P  C  + L++   K G    A  VL EM ++   +   +T   +   L ++
Sbjct: 170 SSK----SPQLC--HGLLRVLLKSGRAGDALHVLDEMPQANSGFS--VTGEIVFGELVRS 221

Query: 252 GRF---REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           GR     E + L  ++  +  + PD      L+   C   K   A +++  +   G   +
Sbjct: 222 GRSFPDGEVVGLVAKLGERG-VFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVD 280

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
             +   L+    +   ++   E+  EM+   ++P  + +  L+N  C+A R+DEAL++  
Sbjct: 281 AASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFD 340

Query: 369 EMKER------GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-YLNKASYRIVL 421
            ++ +      G + D+V FN ++ GLC+ GK E+ L +LE++    I   N  +Y  ++
Sbjct: 341 RLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLI 400

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +   + G  ++A EL R M   G  P+  T N L+  LCK G    A      +   G K
Sbjct: 401 DGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLK 460

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELV 511
             + ++  L+   C    +  A +  +E++
Sbjct: 461 GNAATYTALISAFCGVNNINRAMQCFEEML 490



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 88/220 (40%), Gaps = 38/220 (17%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           T  E+ G   +  TY T++  L +   F     V+ +M        EG+           
Sbjct: 557 TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKM------IKEGL----------- 599

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
                              +PS+      ++       VD             ++ PNT 
Sbjct: 600 -------------------RPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTV 640

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           I+NILI   C+   ++ A  ++++MK  ++  PN  TY+ ++ G+       +A EL + 
Sbjct: 641 IYNILIDALCRNNDVDRAISLMEDMKVKRVR-PNTTTYNAILKGVRDKKMLHKAFELMDR 699

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           MV ++   PD +T  VL +     G++++ K  +E  +++
Sbjct: 700 MV-EEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDS 738


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 176/300 (58%), Gaps = 3/300 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +  L  +   +     L   ++H    P+  ++  +I   CK G LE A E
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L  M    +  PN++ Y+T++ GLC   R++EA EL  EM  KD  L D +T+N+L+D 
Sbjct: 308 ILNRMPSYGLK-PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDF 365

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+ G VDR  +++E M ++GC P+V  YTT++NGFCKEG + EA  +   M +   KP+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ YT ++   C AGR  +A EL+ +M ++GC  + VTFN ++  LC++G +E+A+ +L+
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  +G   +  SY  V++   + G+ E+A+ELL +M+ +G  P+    + +   L + G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 203/436 (46%), Gaps = 40/436 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+ + +S  KG       Y  IL+   R   F     VL  M  + C    G      
Sbjct: 130 ALEVLDEMS-FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTG------ 182

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               NC+L                           LN + E   VD A   L+       
Sbjct: 183 ----NCNL--------------------------VLNAICEQGCVDEAVGLLR-KLAFFG 211

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            + +   +N ++K  C         E++ EM +   + PN++T++TLI  LC+NG F   
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA-PNIVTFNTLIGYLCRNGLFERV 270

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+  +M S+    PD   Y  +IDG C+ G ++ A +I+  M + G  PNV  Y T++ 
Sbjct: 271 HEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C   + +EA+E+  EM       D + +  L++ FC+ G VD  +ELL++M   GC  
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D++T+  ++ G C+EG I+EA+ +L+ +   G   N  SY IVL   C  G    A EL+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ +G  P+  T N L+  LCK G+ E A   L  ++  G  P+  S++ +++ + + 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 498 RKLLFAFELLDELVIK 513
            K   A ELL+ +V K
Sbjct: 510 GKTEEALELLNVMVNK 525



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 173/322 (53%), Gaps = 5/322 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN LI + C+ G  E   EVL +M +   + P++  Y+T+IDG+CK G    A E
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT-PDIRMYATIIDGICKEGHLEVANE 307

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M S   + P+ + YN ++ G C   +   A++++  M    C  +   +  L++ F
Sbjct: 308 ILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G +    E+ ++M +    PD I YTT+IN FC+ G +DEA+ LLK M   GCK + 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++ I+L GLC  G+  +A  ++ ++   G   N  ++  ++NF C+KG +E+AIELL+ 
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
           ML  G  P   + + ++  L KAG  E+A   L  +V  G  P +  ++ +   + R GR
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 499 --KLLFAFELLDELVIKESGTI 518
             K++  F+ + +  I+    +
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVL 568



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 203/416 (48%), Gaps = 43/416 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  +Y  +L  L   K++  V+ ++ +M    C  +   F  L+ +     L ERV
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E+  ++  H  T   P ++  +T ++ + +   +++A   L     +  LKPN   +N 
Sbjct: 271 HEVLAQMSEHGCT---PDIRMYATIIDGICKEGHLEVANEILNRMPSY-GLKPNVVCYNT 326

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++K  C     + A E+L EM +      + +T++ L+D  C+NG     IEL E+M+S 
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              +PD +TY  +I+GFC+ G +D A  +++ M + GC PN  +YT ++ G C  G+  +
Sbjct: 386 G-CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444

Query: 328 AKEV---------------FDEMKNFLLK--------------------PDTIGYTTLIN 352
           A+E+               F+ + NFL K                    PD I Y+T+I+
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 504

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              +AG+ +EALELL  M  +G   + + ++ I   L REG++ + + M + +    I  
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS 564

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +   Y  V++  C++ E ++AI+    M+  G +P+ +T   L+  L   G+A++A
Sbjct: 565 DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 37/349 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFRE 256
           + PN   F  +++  C RG +  A EVL EM  K     P +  Y  +++  C++G FR 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM--YHVILEAACRSGGFRN 164

Query: 257 AIELFEEMVSKDQIL----------------------------------PDALTYNVLID 282
           ++ + E M +K   L                                   D ++YN ++ 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   +    +++M+ M    C PN+  + TL+   C+ G  +   EV  +M      P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y T+I+  C+ G ++ A E+L  M   G K ++V +N +L GLC   + +EA  +L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +++     L+  ++ I+++F CQ G +++ IELL  ML  G +P   T   ++   CK 
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G+ ++A + L  +   G KP + S+ ++++ +C   + + A EL+ +++
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 193/371 (52%), Gaps = 13/371 (3%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E+   +SE  G   +   YATI+D + +    E  + +L +M     K +   +  ++K 
Sbjct: 272 EVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330

Query: 140 FSNCS----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             +        E + EMF K  P+     ++     C N L++   ++L +  L +    
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD-RVIELLEQMLSHG--- 386

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+   +  +I   CK G ++ A  +LK M  S    PN ++Y+ ++ GLC  GR+ 
Sbjct: 387 --CMPDVITYTTVINGFCKEGLIDEAVMLLKSMS-SCGCKPNTVSYTIVLKGLCSAGRWV 443

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A EL  +M+ +    P+ +T+N LI+  C+ G V++A ++++ M  NGC+P++ +Y+T+
Sbjct: 444 DAEELMSQMIQQG-CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G  K GK +EA E+ + M N  + P+TI Y+++     R GRV++ +++   +K+   
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           ++D V +N ++  LC+  + + A+     +  +G   N+++Y +++     +G  ++A E
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622

Query: 436 LLRLMLCRGFL 446
           LL  +  RG L
Sbjct: 623 LLSELCSRGAL 633



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 150/307 (48%), Gaps = 5/307 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++  +C+ G L +A  +   +       PN  T+  ++ GLC  GR  +A+E+ +EM
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K    P    Y+V+++  CR G    + +++E M   GC  +  N   ++N  C++G 
Sbjct: 138 SFKG-CAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  +  ++  F  + D + Y  ++   C A R  +  EL+ EM    C  +IVTFN 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++G LCR G  E    +L ++   G   +   Y  +++  C++G LE A E+L  M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+    N +L  LC A   ++A   L  + +     +  ++ +LV+  C+   +    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 505 ELLDELV 511
           ELL++++
Sbjct: 377 ELLEQML 383



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 10/280 (3%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+ ++ G C+ G+   A  L   +     + P+A T+  ++ G C  G++  A +++
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV----PVPPNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   GC P    Y  ++   C+ G  + +  V + M       DT     ++N  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLC---REGKIEEALGMLEKLWYDGIYLNK 414
           G VDEA+ LL+++   GC+ADIV++N +L GLC   R G +EE   +++++       N 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEE---LMDEMVRVDCAPNI 251

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            ++  ++ + C+ G  E+  E+L  M   G  P       ++  +CK G  E A   L  
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +   G KP    +  +++ +C   +   A ELL E+  K+
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 29/192 (15%)

Query: 349 TLINCFCRAGRV------------DEALELLKEMKERGCKA-----------------DI 379
            LI   C AGR                +     M    C+A                 + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TF  ++ GLC  G+I +AL +L+++ + G       Y ++L  +C+ G    ++ +L  
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +G        N +L  +C+ G  ++A   L  L   G + +  S+  +++ +C  ++
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 500 LLFAFELLDELV 511
                EL+DE+V
Sbjct: 232 WGDVEELMDEMV 243


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 176/300 (58%), Gaps = 3/300 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +  L  +   +     L   ++H    P+  ++  +I   CK G LE A E
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L  M    +  PN++ Y+T++ GLC   R++EA EL  EM  KD  L D +T+N+L+D 
Sbjct: 308 ILNRMPSYGLK-PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDF 365

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+ G VDR  +++E M ++GC P+V  YTT++NGFCKEG + EA  +   M +   KP+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ YT ++   C AGR  +A EL+ +M ++GC  + VTFN ++  LC++G +E+A+ +L+
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  +G   +  SY  V++   + G+ E+A+ELL +M+ +G  P+    + +   L + G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 203/436 (46%), Gaps = 40/436 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+ + +S  KG       Y  IL+   R   F     VL  M  + C    G      
Sbjct: 130 ALEVLDEMS-FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTG------ 182

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               NC+L                           LN + E   VD A   L+       
Sbjct: 183 ----NCNL--------------------------VLNAICEQGCVDEAVGLLR-KLAFFG 211

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            + +   +N ++K  C         E++ EM +   + PN++T++TLI  LC+NG F   
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA-PNIVTFNTLIGYLCRNGLFERV 270

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+  +M S+    PD   Y  +IDG C+ G ++ A +I+  M + G  PNV  Y T++ 
Sbjct: 271 HEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C   + +EA+E+  EM       D + +  L++ FC+ G VD  +ELL++M   GC  
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D++T+  ++ G C+EG I+EA+ +L+ +   G   N  SY IVL   C  G    A EL+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ +G  P+  T N L+  LCK G+ E A   L  ++  G  P+  S++ +++ + + 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 498 RKLLFAFELLDELVIK 513
            K   A ELL+ +V K
Sbjct: 510 GKTEEALELLNVMVNK 525



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 173/322 (53%), Gaps = 5/322 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN LI + C+ G  E   EVL +M +   + P++  Y+T+IDG+CK G    A E
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT-PDIRMYATIIDGICKEGHLEVANE 307

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M S   + P+ + YN ++ G C   +   A++++  M    C  +   +  L++ F
Sbjct: 308 ILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G +    E+ ++M +    PD I YTT+IN FC+ G +DEA+ LLK M   GCK + 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++ I+L GLC  G+  +A  ++ ++   G   N  ++  ++NF C+KG +E+AIELL+ 
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
           ML  G  P   + + ++  L KAG  E+A   L  +V  G  P +  ++ +   + R GR
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 499 --KLLFAFELLDELVIKESGTI 518
             K++  F+ + +  I+    +
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVL 568



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 203/416 (48%), Gaps = 43/416 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  +Y  +L  L   K++  V+ ++ +M    C  +   F  L+ +     L ERV
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E+  ++  H  T   P ++  +T ++ + +   +++A   L     +  LKPN   +N 
Sbjct: 271 HEVLAQMSEHGCT---PDIRMYATIIDGICKEGHLEVANEILNRMPSY-GLKPNVVCYNT 326

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++K  C     + A E+L EM +      + +T++ L+D  C+NG     IEL E+M+S 
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              +PD +TY  +I+GFC+ G +D A  +++ M + GC PN  +YT ++ G C  G+  +
Sbjct: 386 G-CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444

Query: 328 AKEV---------------FDEMKNFLLK--------------------PDTIGYTTLIN 352
           A+E+               F+ + NFL K                    PD I Y+T+I+
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 504

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              +AG+ +EALELL  M  +G   + + ++ I   L REG++ + + M + +    I  
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS 564

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +   Y  V++  C++ E ++AI+    M+  G +P+ +T   L+  L   G+A++A
Sbjct: 565 DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 37/349 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFRE 256
           + PN   F  +++  C RG +  A EVL EM  K     P +  Y  +++  C++G FR 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM--YHVILEAACRSGGFRN 164

Query: 257 AIELFEEMVSKDQIL----------------------------------PDALTYNVLID 282
           ++ + E M +K   L                                   D ++YN ++ 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   +    +++M+ M    C PN+  + TL+   C+ G  +   EV  +M      P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y T+I+  C+ G ++ A E+L  M   G K ++V +N +L GLC   + +EA  +L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +++     L+  ++ I+++F CQ G +++ IELL  ML  G +P   T   ++   CK 
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G+ ++A + L  +   G KP + S+ ++++ +C   + + A EL+ +++
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 193/371 (52%), Gaps = 13/371 (3%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E+   +SE  G   +   YATI+D + +    E  + +L +M     K +   +  ++K 
Sbjct: 272 EVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330

Query: 140 FSNCS----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             +        E + EMF K  P+     ++     C N L++   ++L +  L +    
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD-RVIELLEQMLSHG--- 386

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+   +  +I   CK G ++ A  +LK M  S    PN ++Y+ ++ GLC  GR+ 
Sbjct: 387 --CMPDVITYTTVINGFCKEGLIDEAVMLLKSMS-SCGCKPNTVSYTIVLKGLCSAGRWV 443

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A EL  +M+ +    P+ +T+N LI+  C+ G V++A ++++ M  NGC+P++ +Y+T+
Sbjct: 444 DAEELMSQMIQQG-CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G  K GK +EA E+ + M N  + P+TI Y+++     R GRV++ +++   +K+   
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           ++D V +N ++  LC+  + + A+     +  +G   N+++Y +++     +G  ++A E
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622

Query: 436 LLRLMLCRGFL 446
           LL  +  RG L
Sbjct: 623 LLSELCSRGAL 633



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 150/307 (48%), Gaps = 5/307 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++  +C+ G L +A  +   +       PN  T+  ++ GLC  GR  +A+E+ +EM
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K    P    Y+V+++  CR G    + +++E M   GC  +  N   ++N  C++G 
Sbjct: 138 SFKG-CAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  +  ++  F  + D + Y  ++   C A R  +  EL+ EM    C  +IVTFN 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++G LCR G  E    +L ++   G   +   Y  +++  C++G LE A E+L  M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+    N +L  LC A   ++A   L  + +     +  ++ +LV+  C+   +    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 505 ELLDELV 511
           ELL++++
Sbjct: 377 ELLEQML 383



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 10/280 (3%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+ ++ G C+ G+   A  L   +     + P+A T+  ++ G C  G++  A +++
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV----PVPPNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   GC P    Y  ++   C+ G  + +  V + M       DT     ++N  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLC---REGKIEEALGMLEKLWYDGIYLNK 414
           G VDEA+ LL+++   GC+ADIV++N +L GLC   R G +EE   +++++       N 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEE---LMDEMVRVDCAPNI 251

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            ++  ++ + C+ G  E+  E+L  M   G  P       ++  +CK G  E A   L  
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +   G KP    +  +++ +C   +   A ELL E+  K+
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 29/192 (15%)

Query: 349 TLINCFCRAGRV------------DEALELLKEMKERGCKA-----------------DI 379
            LI   C AGR                +     M    C+A                 + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TF  ++ GLC  G+I +AL +L+++ + G       Y ++L  +C+ G    ++ +L  
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +G        N +L  +C+ G  ++A   L  L   G + +  S+  +++ +C  ++
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 500 LLFAFELLDELV 511
                EL+DE+V
Sbjct: 232 WGDVEELMDEMV 243


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 235/507 (46%), Gaps = 53/507 (10%)

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQ-KGFNHNNATYATILDKLARYKKFEAVDA 116
           R  S      L KC +  Q      ++++     F H+  +++ ++  L R ++     A
Sbjct: 94  RLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQA 153

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK------------- 163
           V+ +M  ++      I  +L+  + NC  +  V ++  + +   R+              
Sbjct: 154 VILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK 213

Query: 164 ---PSLKAISTCLNLLIESNQVDLAQNFLK-----------YS----------NQHLR-- 197
               S+ A ++ L  L++   VDLA    +           Y+          NQ +   
Sbjct: 214 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 273

Query: 198 -----------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
                      + P+   +N LI  +C++G LE AFE++  M    +  P + TY+ +I+
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK-PCVFTYNAIIN 332

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           GLCK G++  A  + +EM+ K  + PD  TYN+L+   CR   +  A++I + M + G  
Sbjct: 333 GLCKTGKYLRAKGVLDEML-KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 391

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ +++ L+    K G L +A + F +MKN  L PD + YT LI  FCR G + EAL++
Sbjct: 392 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 451

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             EM E+GC  D+VT+N IL GLC+E  + EA  +  ++   G++ +  ++  ++N   +
Sbjct: 452 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 511

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G + KA+ L  +M+ R   P   T N L+   CK    E        ++     P   S
Sbjct: 512 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 571

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           + +L+   C    +  AF L DE+V K
Sbjct: 572 YGILINGYCNMGCVSEAFRLWDEMVEK 598



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 219/439 (49%), Gaps = 15/439 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGI 132
           A E+ +++S  KG      TY  I++ L +  K+     VL +M     + +T  ++  I
Sbjct: 308 AFELMDSMS-GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN--I 364

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
            L       N    ER+ +      P     P L + S  + LL ++  +D A  + +  
Sbjct: 365 LLVECCRNDNMMDAERIFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR-D 419

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            ++  L P+  I+ ILI   C+ G +  A +V  EM + Q    +++TY+T+++GLCK  
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCVLDVVTYNTILNGLCKEK 478

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              EA ELF EM  +  + PD  T+  LI+G+ + G +++A  + E M      P+V  Y
Sbjct: 479 MLSEADELFTEMTERG-VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 537

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            TL++GFCK  ++++  E++++M +  + P+ I Y  LIN +C  G V EA  L  EM E
Sbjct: 538 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 597

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G +A I+T N I+ G CR G   +A   L  +   GI  +  +Y  ++N   ++  +++
Sbjct: 598 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 657

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  L+  M   G LP   T N +L    + G  ++A + +  ++E G  P+  ++  L+ 
Sbjct: 658 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 717

Query: 493 LICRGRKLLFAFELLDELV 511
                  L  AF + DE++
Sbjct: 718 GHVTQNNLKEAFRVHDEML 736



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 15/438 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN-L 136
           A EI+  V  + G   N  T   +++ L + +K E   + L  M  E   F + +  N L
Sbjct: 238 AWEIYQEVV-RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTL 295

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           +  +    L E   E+   +      KP +   +  +N L ++ +   A+  L      +
Sbjct: 296 INAYCRQGLLEEAFELMDSMSG-KGLKPCVFTYNAIINGLCKTGKYLRAKGVLD-EMLKI 353

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+T  +NIL+   C+   +  A  +  EM  SQ   P+L+++S LI  L KNG   +
Sbjct: 354 GMSPDTATYNILLVECCRNDNMMDAERIFDEMP-SQGVVPDLVSFSALIGLLSKNGCLDQ 412

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A++ F +M +   + PD + Y +LI GFCR G +  A K+ + M   GC  +V  Y T++
Sbjct: 413 ALKYFRDMKNAG-LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 471

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG CKE  L EA E+F EM    + PD   +TTLIN + + G +++A+ L + M +R  K
Sbjct: 472 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 531

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GIYLNKASYRIVLNFSCQKGELEK 432
            D+VT+N ++ G C+  ++E+    + +LW D     IY N  SY I++N  C  G + +
Sbjct: 532 PDVVTYNTLIDGFCKGSEMEK----VNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 587

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  L   M+ +GF     T N ++   C+AG A  A   L  ++  G  P+  ++  L+ 
Sbjct: 588 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 647

Query: 493 LICRGRKLLFAFELLDEL 510
              +   +  AF L++++
Sbjct: 648 GFIKEENMDRAFALVNKM 665



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 150/302 (49%), Gaps = 7/302 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ + + EQ G   +  TY TIL+ L + K     D +  +MT          F  L+
Sbjct: 448 ALKVRDEMLEQ-GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
             +S      + + +F  +  I R  KP +   +T ++   + ++++   N L       
Sbjct: 507 NGYSKDGNMNKAVTLFEMM--IQRNLKPDVVTYNTLIDGFCKGSEMEKV-NELWNDMISR 563

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ PN   + ILI  +C  G +  AF +  EM +       +IT +T++ G C+ G   +
Sbjct: 564 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE-ATIITCNTIVKGYCRAGNAVK 622

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A E    M+ K  I+PD +TYN LI+GF +   +DRA  ++  M+N+G  P+V  Y  ++
Sbjct: 623 ADEFLSNMLLKG-IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 681

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NGF ++G++QEA+ +  +M    + PD   YT+LIN       + EA  +  EM +RG  
Sbjct: 682 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 741

Query: 377 AD 378
            D
Sbjct: 742 PD 743


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 210/421 (49%), Gaps = 44/421 (10%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKF-HEGIFLNLMKH-FSNCSLHERVLEMFHK 155
           ++ +L K+A+ K ++ V ++   M  E C   H+    N++ +    CS     L +  K
Sbjct: 13  FSKVLSKIAKSKNYDLVISLFHHM--EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 70

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +     E P +  +S+ +N   + N+V  A + +    + +  +P+  I+N +I   CK 
Sbjct: 71  MMKFGYE-PDVVTVSSLINGFCQGNRVFDAIDLVS-KMEEMGFRPDVVIYNTIIDGSCKI 128

Query: 216 GTLESAFEVLKEMKKS-----QMSY-----------------------------PNLITY 241
           G +  A E+   M++       ++Y                             PN+IT+
Sbjct: 129 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 188

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           + +ID   K G+F EA++L+EEM ++  + PD  TYN LI+G C  G+VD AK++++ M 
Sbjct: 189 TAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC P+V  Y TL+NGFCK  ++ E  ++F EM    L  DTI Y T+I  + +AGR D
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A E+   M  R    +I T++I+L GLC   ++E+AL + E +    I L+  +Y IV+
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G +E A +L R + C+G  P   +   ++   C+    + + +    + E G  
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424

Query: 482 P 482
           P
Sbjct: 425 P 425



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 164/334 (49%), Gaps = 36/334 (10%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREA 257
           +P+    + LI   C+   +  A +++ +M+  +M + P+++ Y+T+IDG CK G   +A
Sbjct: 77  EPDVVTVSSLINGFCQGNRVFDAIDLVSKME--EMGFRPDVVIYNTIIDGSCKIGLVNDA 134

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +ELF+ M  +D +  DA+TYN L+ G C  G+   A ++M  M      PNV  +T +++
Sbjct: 135 VELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 193

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            F KEGK  EA ++++EM    + PD   Y +LIN  C  GRVDEA ++L  M  +GC  
Sbjct: 194 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 253

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT+N ++ G C+  +++E   +  ++   G+  +  +Y  ++    Q G  + A E+ 
Sbjct: 254 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 313

Query: 438 RLMLCRGFLPHYA--------------------------------TSNELLVRLCKAGMA 465
             M  R  +  Y+                                T N ++  +CK G  
Sbjct: 314 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 373

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           EDA      L   G KP+  S+  ++   CR R+
Sbjct: 374 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 407



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 142/256 (55%), Gaps = 1/256 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           +L +Y+ +I+ LC+  RF  A+ +  +M+ K    PD +T + LI+GFC+G +V  A  +
Sbjct: 44  DLYSYNIVINCLCRCSRFVIALSVVGKMM-KFGYEPDVVTVSSLINGFCQGNRVFDAIDL 102

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +  M+  G  P+V  Y T+++G CK G + +A E+FD M+   ++ D + Y +L+   C 
Sbjct: 103 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 162

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           +GR  +A  L+++M  R    +++TF  ++    +EGK  EA+ + E++    +  +  +
Sbjct: 163 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 222

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++N  C  G +++A ++L LM+ +G LP   T N L+   CK+   ++       + 
Sbjct: 223 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 282

Query: 477 EMGFKPESDSWALLVE 492
           + G   ++ ++  +++
Sbjct: 283 QRGLVGDTITYNTIIQ 298



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 149/299 (49%), Gaps = 12/299 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F+ + E+ G   +  TY +++  L    ++     ++R M       +   F  ++
Sbjct: 134 AVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             F         ++++ ++   TR    P +   ++ +N L    +VD A+  L      
Sbjct: 193 DVFVKEGKFSEAMKLYEEM---TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 249

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L P+   +N LI   CK   ++   ++ +EM +  +   + ITY+T+I G  + GR  
Sbjct: 250 GCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL-VGDTITYNTIIQGYFQAGRPD 307

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A E+F  M S+    P+  TY++L+ G C   +V++A  + E M+ +    ++  Y  +
Sbjct: 308 AAQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 363

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++G CK G +++A ++F  +    LKPD + YTT+I+ FCR  + D++  L ++M+E G
Sbjct: 364 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 120/243 (49%)

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           LP  + ++ ++    +    D    +   M+  G   ++++Y  ++N  C+  +   A  
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           V  +M  F  +PD +  ++LIN FC+  RV +A++L+ +M+E G + D+V +N I+ G C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + G + +A+ + +++  DG+  +  +Y  ++   C  G    A  L+R M+ R  +P+  
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T   ++    K G   +A      +      P+  ++  L+  +C   ++  A ++LD +
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 511 VIK 513
           V K
Sbjct: 247 VTK 249



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 85/174 (48%), Gaps = 2/174 (1%)

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  + ++ +++   ++   D  + L   M+  G   D+ ++NI++  LCR  +   AL +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           + K+   G   +  +   ++N  CQ   +  AI+L+  M   GF P     N ++   CK
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 462 AGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            G+  D A+ LF  +E  G + ++ ++  LV  +C   +   A  L+ ++V+++
Sbjct: 128 IGLVND-AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 180/315 (57%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N L+   CK G +E A+    EMK+  +   N++T+ST +D  CKNG  REA+
Sbjct: 261 RPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGV-MANVVTFSTFVDAFCKNGMVREAM 319

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF +M  K  + P+ +TY  L+DG C+ G++D A  +   M   G   NV  YT L++G
Sbjct: 320 KLFAQMRMKG-MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDG 378

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKEGK+ EA++VF  M+   ++ + + YTTLI+        + AL LL EMK++G + D
Sbjct: 379 LCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELD 438

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +  +  ++ GLC   K++EA  +L K+   G+  N   Y  +++   +  +  +AI LL+
Sbjct: 439 VSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQ 498

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  GF P+  T   L+  LCKAG  ++A      +V++G +P   ++  LV+ +C+  
Sbjct: 499 KMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNG 558

Query: 499 KLLFAFELLDELVIK 513
           +L  A  LLDE++ K
Sbjct: 559 RLDKAVLLLDEMIDK 573



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 202/375 (53%), Gaps = 23/375 (6%)

Query: 145 LHERVLEMFHK----IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
           L   ++++ H+    + P     PS+  + T L+LL +   +D A   L    + LR+ P
Sbjct: 105 LAASLVDLLHRAALALGPRRSALPSV--VDTLLSLLADRGLLDDAVLALARVRE-LRVPP 161

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT   N ++    +  + E A+ + +     Q+  PN+ T++ +ID LCK G   EA  L
Sbjct: 162 NTRTCNHILLCLARERSSELAWRLFE-----QLPAPNVFTFNIMIDFLCKEGDLAEARAL 216

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
              M +     PD +TYN LIDG+ + G+++  +K++  M+  GC P+V  Y  L+N FC
Sbjct: 217 LARMKAIG-CSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFC 275

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G+++ A   F EMK   +  + + ++T ++ FC+ G V EA++L  +M+ +G K + V
Sbjct: 276 KFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEV 335

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+  ++ G C+ G++++AL +  ++   G+ LN  +Y ++++  C++G++ +A ++ RLM
Sbjct: 336 TYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLM 395

Query: 441 LCRGFLPHYATSNELLVRLCKAG--MAEDAAIALFGLVEM---GFKPESDSWALLVELIC 495
              G       +NELL      G  + +++  AL  L EM   G + +   +  L+  +C
Sbjct: 396 ERAGI-----RANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLC 450

Query: 496 RGRKLLFAFELLDEL 510
             +KL  A  LL+++
Sbjct: 451 NLQKLDEAKSLLNKM 465



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 212/475 (44%), Gaps = 44/475 (9%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E+  + A  +F  +     F     T+  ++D L +        A+L +M    C     
Sbjct: 176 ERSSELAWRLFEQLPAPNVF-----TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVV 230

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            + +L+  +  C   E V ++  ++      +P +   +  +N   +  +++ A ++   
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMRGCGC-RPDVVTYNALVNCFCKFGRMERAYSYFAE 289

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +   +  N   F+  +   CK G +  A ++  +M+   M  PN +TY+ L+DG CK 
Sbjct: 290 MKRE-GVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMK-PNEVTYTCLVDGTCKA 347

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  +A+ L  EMV +   L + +TY VL+DG C+ GKV  A+ +   M+  G   N   
Sbjct: 348 GRLDDALVLTNEMVQQGVPL-NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELL 406

Query: 312 YTTLMNG-----------------------------------FCKEGKLQEAKEVFDEMK 336
           YTTL++G                                    C   KL EAK + ++M 
Sbjct: 407 YTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMD 466

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              LKP+ + YT +++   +A +  EA+ LL++M + G + +IVT+  ++ GLC+ G I+
Sbjct: 467 ECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSID 526

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA+    K+   G+  N  +Y  +++  C+ G L+KA+ LL  M+ +G          L+
Sbjct: 527 EAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLM 586

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
               K G  +DA      ++  G + +   +   V   C    +  A E+L E++
Sbjct: 587 DGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 4/311 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   N  TY  ++D L +  K    + V R M     + +E ++  L+         E
Sbjct: 362 QQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R L +  ++     E   +      +  L    ++D A++ L   ++   LKPN  I+  
Sbjct: 422 RALSLLSEMKDKGMEL-DVSLYGALIWGLCNLQKLDEAKSLLNKMDE-CGLKPNNVIYTN 479

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++    K      A  +L++M  S    PN++TY  L+DGLCK G   EAI  F +MV  
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFR-PNIVTYCALVDGLCKAGSIDEAISHFNKMVDL 538

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + P+   Y  L+DG C+ G++D+A  +++ M + G + +    T+LM+G  K+G LQ+
Sbjct: 539 G-LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD 597

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +  +M N  L+ D  GYT  +  FC    + EA E+L EM E G   D V +N ++ 
Sbjct: 598 AFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657

Query: 388 GLCREGKIEEA 398
              + G +EEA
Sbjct: 658 KCQKLGNMEEA 668



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 192/455 (42%), Gaps = 82/455 (18%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +  TY +++D   +  + E V+ ++ +M    C+     +  L+  F      ER 
Sbjct: 224 GCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERA 283

Query: 150 LEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
              F ++    RE    ++   ST ++   ++  V  A     ++   ++ +KPN   + 
Sbjct: 284 YSYFAEMK---REGVMANVVTFSTFVDAFCKNGMVREAMKL--FAQMRMKGMKPNEVTYT 338

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREA-------- 257
            L+   CK G L+ A  +  EM   Q   P N++TY+ L+DGLCK G+  EA        
Sbjct: 339 CLVDGTCKAGRLDDALVLTNEM--VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLME 396

Query: 258 ---------------------------IELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
                                      + L  EM  K   L D   Y  LI G C   K+
Sbjct: 397 RAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMEL-DVSLYGALIWGLCNLQKL 455

Query: 291 DRAKKIM-----------------------------------EFMKNNGCNPNVFNYTTL 315
           D AK ++                                   + M ++G  PN+  Y  L
Sbjct: 456 DEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCAL 515

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CK G + EA   F++M +  L+P+   YT L++  C+ GR+D+A+ LL EM ++G 
Sbjct: 516 VDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGM 575

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D V    ++ G  ++G +++A  +  K+   G+ L+   Y   +   C    +++A E
Sbjct: 576 SLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEARE 635

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           +L  M+  G  P     N L+ +  K G  E+AAI
Sbjct: 636 VLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAI 670



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 10/288 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+ G   N   Y T++     YK  E   ++L +M  +  +    ++  L+    N    
Sbjct: 396 ERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKL 455

Query: 147 ERVLEMFHKIHPITREKPSL---KAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +    + +K+     +  ++     +  C     ES  + L Q  +         +PN  
Sbjct: 456 DEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG-----FRPNIV 510

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +  L+   CK G+++ A     +M    +  PN+  Y+ L+DGLCKNGR  +A+ L +E
Sbjct: 511 TYCALVDGLCKAGSIDEAISHFNKMVDLGLE-PNVQAYTALVDGLCKNGRLDKAVLLLDE 569

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ K   L D +    L+DG  + G +  A  +   M N+G   +++ YT  + GFC   
Sbjct: 570 MIDKGMSL-DNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLN 628

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
            +QEA+EV  EM    + PD + Y  LIN   + G ++EA  L  EM+
Sbjct: 629 MIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 6/254 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + KG   + + Y  ++  L   +K +   ++L +M     K +  I+ N+M         
Sbjct: 431 KDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKE 490

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHLRLKPNTCIF 205
              + +  K+   +  +P++      ++ L ++  +D A  +F K  +  L L+PN   +
Sbjct: 491 SEAIALLQKMMD-SGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVD--LGLEPNVQAY 547

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             L+   CK G L+ A  +L EM    MS  N++  ++L+DG  K G  ++A  L  +M+
Sbjct: 548 TALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVC-TSLMDGHLKQGNLQDAFALKAKMI 606

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +    L D   Y   + GFC    +  A++++  M  NG  P+   Y  L+N   K G +
Sbjct: 607 NSGLQL-DLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNM 665

Query: 326 QEAKEVFDEMKNFL 339
           +EA  + +EM++ L
Sbjct: 666 EEAAILQNEMESLL 679



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 6/225 (2%)

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G +D A   +  ++     PN      ++    +E   + A  +F+++      P+   +
Sbjct: 142 GLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTF 197

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             +I+  C+ G + EA  LL  MK  GC  D+VT+N ++ G  + G++EE   ++ ++  
Sbjct: 198 NIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRG 257

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G   +  +Y  ++N  C+ G +E+A      M   G + +  T +  +   CK GM  +
Sbjct: 258 CGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVRE 317

Query: 468 AAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            A+ LF  + M G KP   ++  LV+  C+  +L  A  L +E+V
Sbjct: 318 -AMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV 361


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 224/466 (48%), Gaps = 45/466 (9%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           +LIK  K     + ++  +  +     +  T++ +++  A+  +     ++L  +     
Sbjct: 78  TLIKL-KRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGF 136

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQV-D 183
           +    I   LMK      L  RVLE    +H           +   T +N L +  +  D
Sbjct: 137 QIDVRILTTLMK---GLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRD 193

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
             Q F K   + +R+ PN  ++N +I   CK+G ++ A  +  EM ++ +   ++ +Y++
Sbjct: 194 AIQMFPKM--KKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIEL-DVYSYNS 250

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           +I G C  GRF+ A++L +EMV + ++ PD  T+N+LIDG C+ G+V  A  ++  M   
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P++ +Y  LMNG+C  G + EAK+VFD+M      P+ I Y TLIN +C+   VDEA
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEA 370

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREG------------------------------ 393
           + LL EM  +    D VT+N +L GL + G                              
Sbjct: 371 MVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDD 430

Query: 394 -----KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
                K ++AL + + +   GI  N  +Y I+L+  C+ G L+ A E+ +L+  +G  P+
Sbjct: 431 YFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPN 490

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
             T N ++  LCK G  ++A   L+ +V   + P   ++  +V  I
Sbjct: 491 IRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 181/386 (46%), Gaps = 71/386 (18%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS--QMSYPNLIT--------------- 240
           +KP+   F+ILI    + G +  AF +L  + K   Q+    L T               
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 241 -----------------YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                            Y T+I+GLCK G+ R+AI++F +M  K ++ P+ + YN +IDG
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKM-KKIRVYPNLIMYNTVIDG 219

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKP 342
            C+ G VD A  +   M  NG   +V++Y ++++GFC  G+ Q A ++ DEM     + P
Sbjct: 220 LCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   +  LI+  C+ GRV EA  ++  M +RG K DIV++N ++ G C  G + EA  + 
Sbjct: 280 DVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVF 339

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +K+       N  SY  ++N  C+   +++A+ LL  M  +  +P   T N LL  L K+
Sbjct: 340 DKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKS 399

Query: 463 GMAE----------------------------------DAAIALFG-LVEMGFKPESDSW 487
           G +                                   D A+ALF  ++E+G  P   ++
Sbjct: 400 GRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTY 459

Query: 488 ALLVELICRGRKLLFAFELLDELVIK 513
            +L++ +C+  +L +A E+   L  K
Sbjct: 460 NILLDGLCKSGRLKYAKEIFQLLSAK 485



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 148/272 (54%), Gaps = 1/272 (0%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           ++ L+  L K  R+   + L+  + SK  I P  +T+++LI+ F + G++  A  ++  +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G   +V   TTLM G C +G++ EA  +  E  +   + D + Y T+IN  C+ G+ 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            +A+++  +MK+     +++ +N ++ GLC++G ++EA G+  ++  +GI L+  SY  +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 421 LNFSCQKGELEKAIELLRLMLCRG-FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++  C  G  + A++LL  M+ RG   P   T N L+  LCK G   +A   +  +++ G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +KP+  S+  L+   C    +  A ++ D++V
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMV 343


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 220/403 (54%), Gaps = 13/403 (3%)

Query: 112 EAVDAVLRQMTY--ETCKFHEGIFLNLM-KHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
           EAVD + R M    +  +F  G  LN M K  +  S  + + +M H+     + KP +  
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHR-----KIKPHVVT 267

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            +  ++ L +  ++D A +F  +S    + +K N   +N LI   C  G  +   ++L++
Sbjct: 268 YTIIIDNLCKDGRLDDALSF--FSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRD 325

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M   +++ PN++T+S LID L K G+  EA +L+ EM+++  I P+ +TYN LI G C  
Sbjct: 326 MITRKIT-PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG-IEPNTITYNSLIYGLCND 383

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            ++D A ++M+ M + GC+P+++ Y  L+NGFCK  ++ +   +F +M    +  DT+ Y
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           +TLI  FC++ ++  A ++ +EM  +G    I+T+ I+L GLC  G++EEALG+L+++  
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
             + L+   Y I+++  C   +++ A  L   +  +G      + N +L  LCK     +
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           A      + E G++P+  ++  L+    RG  +  + +L++E+
Sbjct: 564 ADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 33/436 (7%)

Query: 87  EQKGFNHNNATYATILDKLARYKK----FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN 142
           E KG  ++  T   +++   R +K    F A+  + + + YE         LN       
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFK-LGYEPNTVTFNTLLN------G 169

Query: 143 CSLHERVLEMFHKIH--PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
             L  RV E    +    +++  P L  ++T +N L   ++V  A + +     +   +P
Sbjct: 170 LCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMAN-GCQP 228

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +  ++   CK G   SA ++L++M+  ++  P+++TY+ +ID LCK+GR  +A+  
Sbjct: 229 NQFTYGPILNRMCKSGNTASALDLLRKMEHRKIK-PHVVTYTIIIDNLCKDGRLDDALSF 287

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F EM +K  I  +  TYN LI  FC  G+ D   +++  M      PNV  ++ L++   
Sbjct: 288 FSEMETKG-IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLV 346

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           KEGKL EAK++++EM    ++P+TI Y +LI   C   R+DEA +++  M  +GC  DI 
Sbjct: 347 KEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIW 406

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+NI++ G C+  ++++ + +  K+   G+  +  +Y  ++   CQ  +L  A ++ + M
Sbjct: 407 TYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEM 466

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDA--------------AIALFGLVEMGF---KPE 483
           + +G  P   T   LL  LC  G  E+A               I ++ ++  G       
Sbjct: 467 VSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKV 526

Query: 484 SDSWALLVELICRGRK 499
            D+W+L   L  +G K
Sbjct: 527 DDAWSLFCSLPSKGVK 542



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 187/358 (52%), Gaps = 11/358 (3%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP---NTCIFNILIKHHCKRG 216
           +R  P++   +    LL  + Q DL     K     + LK    +    NI+I   C+R 
Sbjct: 84  SRPLPTVIDFNRLFGLLARTKQYDLVLALCK----QMELKGIAYDLYTLNIMINCFCRRR 139

Query: 217 TLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
            L  AF  + ++ K  + Y PN +T++TL++GLC  GR  EA+EL + MV   Q +PD +
Sbjct: 140 KLGFAFSAMGKIFK--LGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS-QHVPDLI 196

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           T N +++G C   +V  A  ++  M  NGC PN F Y  ++N  CK G    A ++  +M
Sbjct: 197 TLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKM 256

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           ++  +KP  + YT +I+  C+ GR+D+AL    EM+ +G KA++ T+N ++G  C  G+ 
Sbjct: 257 EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRW 316

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           ++   +L  +    I  N  ++  +++   ++G+L +A +L   M+ RG  P+  T N L
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL 376

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +  LC     ++A   +  +V  G  P+  ++ +L+   C+ +++     L  ++ ++
Sbjct: 377 IYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLR 434



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 169/316 (53%), Gaps = 2/316 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +PNT  FN L+   C  G +  A E++  M  SQ   P+LIT +T+++GLC   R  
Sbjct: 154 LGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ-HVPDLITLNTIVNGLCLKDRVS 212

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA++L   M++ +   P+  TY  +++  C+ G    A  ++  M++    P+V  YT +
Sbjct: 213 EAVDLIARMMA-NGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTII 271

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++  CK+G+L +A   F EM+   +K +   Y +LI  FC  GR D+  +LL++M  R  
Sbjct: 272 IDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKI 331

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             ++VTF+ ++  L +EGK+ EA  +  ++   GI  N  +Y  ++   C    L++A +
Sbjct: 332 TPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQ 391

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           ++ LM+ +G  P   T N L+   CKA   +D       +   G   ++ +++ L++  C
Sbjct: 392 MMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFC 451

Query: 496 RGRKLLFAFELLDELV 511
           + RKL+ A ++  E+V
Sbjct: 452 QSRKLIVAKKVFQEMV 467



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 188/367 (51%), Gaps = 8/367 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E +    +  TY  I+D L +  + +   +   +M  +  K +   + +L+  F +    
Sbjct: 257 EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRW 316

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCI 204
           +   ++   +  ITR+  P++   S  ++ L++  ++  A++   Y+    R ++PNT  
Sbjct: 317 DDGAQLLRDM--ITRKITPNVVTFSALIDSLVKEGKLTEAKDL--YNEMITRGIEPNTIT 372

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   C    L+ A +++ ++  S+   P++ TY+ LI+G CK  +  + + LF +M
Sbjct: 373 YNSLIYGLCNDKRLDEANQMM-DLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            S   ++ D +TY+ LI GFC+  K+  AKK+ + M + G +P +  Y  L++G C  G+
Sbjct: 432 -SLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGE 490

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+EA  + D+M    ++ D   Y  +I+  C A +VD+A  L   +  +G K DI ++NI
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L GLC+   + EA  +  K+  DG   +  +Y  ++    +  ++  +++L+  M   G
Sbjct: 551 MLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCG 610

Query: 445 FLPHYAT 451
           F    +T
Sbjct: 611 FSSDAST 617



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 175/363 (48%), Gaps = 20/363 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL  F+ + E KG   N  TY +++     + +++    +LR M       +   F  L+
Sbjct: 284 ALSFFSEM-ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALI 342

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
                        ++++++  ITR  +P+    ++ +  L    ++D A       NQ +
Sbjct: 343 DSLVKEGKLTEAKDLYNEM--ITRGIEPNTITYNSLIYGLCNDKRLDEA-------NQMM 393

Query: 197 RL------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            L       P+   +NILI   CK   ++    + ++M    M   + +TYSTLI G C+
Sbjct: 394 DLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM-IADTVTYSTLIQGFCQ 452

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           + +   A ++F+EMVS+  + P  +TY +L+DG C  G+++ A  I++ M       ++ 
Sbjct: 453 SRKLIVAKKVFQEMVSQG-VHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIG 511

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y  +++G C   K+ +A  +F  + +  +K D   Y  +++  C+   + EA  L ++M
Sbjct: 512 IYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKM 571

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           KE G + D  T+N ++    R   I  ++ ++E++   G   + ++ +IV++     GEL
Sbjct: 572 KEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDM-LSSGEL 630

Query: 431 EKA 433
           +K+
Sbjct: 631 DKS 633



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 157/320 (49%), Gaps = 14/320 (4%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  T++ ++D L +  K      +  +M     + +   + +L+    N    ++ L+  
Sbjct: 334 NVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCN----DKRLDEA 389

Query: 154 HKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILI 209
           +++  +   K   P +   +  +N   ++ QVD      +     LR +  +T  ++ LI
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFR--KMSLRGMIADTVTYSTLI 447

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
           +  C+   L  A +V +EM  SQ  +P ++TY+ L+DGLC NG   EA+ + ++M  K +
Sbjct: 448 QGFCQSRKLIVAKKVFQEMV-SQGVHPGIMTYAILLDGLCDNGELEEALGILDQM-HKCK 505

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           +  D   YN++I G C   KVD A  +   + + G   ++ +Y  +++G CK   L EA 
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +F +MK    +PD   Y TLI    R   +  +++L++EMK  G  +D  T  I++  L
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML 625

Query: 390 CREGKIEEA-LGMLEKLWYD 408
              G+++++ L ML   + D
Sbjct: 626 -SSGELDKSFLNMLSGPFGD 644



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 132/260 (50%), Gaps = 3/260 (1%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ LF+ M+ + + LP  + +N L     R  + D    + + M+  G   +++    +
Sbjct: 73  DAVALFQSML-RSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N FC+  KL  A     ++     +P+T+ + TL+N  C  GRV EA+EL+  M     
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D++T N I+ GLC + ++ EA+ ++ ++  +G   N+ +Y  +LN  C+ G    A++
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELI 494
           LLR M  R   PH  T   ++  LCK G  +D A++ F  +E  G K    ++  L+   
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDD-ALSFFSEMETKGIKANVFTYNSLIGSF 310

Query: 495 CRGRKLLFAFELLDELVIKE 514
           C   +     +LL +++ ++
Sbjct: 311 CSFGRWDDGAQLLRDMITRK 330


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 180/364 (49%), Gaps = 70/364 (19%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +N +I   C RG +++A ++++EM++     PN  TY T+I G CK GR  EA+
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD--------------------------- 291
           ++F+EM++K ++ P+A+ YN LI G+C  GK+D                           
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188

Query: 292 --------RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE--------------------- 322
                    A +++E M   G  P+VF Y  L+NG CKE                     
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248

Query: 323 --------------GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                         G++QE  ++FDE     ++PD + Y  LIN    +G +D A E++ 
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM+++    D VT+N ++ GLC  G+++EA  +++++   GI  +  +Y  +++    KG
Sbjct: 309 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +++ A+ +   M+ +GF P   T N L+  LCK G  +DA   +  +VE G  P+  ++ 
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 428

Query: 489 LLVE 492
            L+E
Sbjct: 429 SLIE 432



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 163/374 (43%), Gaps = 42/374 (11%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++   I+        Q AL+I   + E+ G   N  TY T++    +  + +   
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            V  +M  +     E +  N +     C   +    + ++   + R    +       NL
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVER---GVAMTVATYNL 184

Query: 176 LIESNQVDLAQNFLKYSNQHLR---LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L+ +  +D          + +    L P+   +NILI  HCK G ++ A E+ + M +  
Sbjct: 185 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMV--------------------------- 265
           +    ++TY++LI  L K G+ +E  +LF+E V                           
Sbjct: 245 VR-ATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 303

Query: 266 -------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                   K +I PD +TYN L+ G C  G+VD A+K+++ M   G  P++  Y TL++G
Sbjct: 304 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 363

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +  +G +++A  + +EM N    P  + Y  LI   C+ G+ D+A  ++KEM E G   D
Sbjct: 364 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 423

Query: 379 IVTFNIILGGLCRE 392
             T+  ++ GL  E
Sbjct: 424 DSTYISLIEGLTTE 437



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 6/182 (3%)

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +F +M    L   T  +  ++   C AG+   ALELL++M     + + VT+N ++ G C
Sbjct: 28  LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFC 83

Query: 391 REGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PH 448
             G+++ AL ++ ++    GI  N+ +Y  V++  C+ G +++A+++   ML +G + P 
Sbjct: 84  SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
               N L+   C  G  + A +    +VE G      ++ LLV  +    +   A+EL++
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 203

Query: 509 EL 510
           E+
Sbjct: 204 EM 205


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 236/462 (51%), Gaps = 10/462 (2%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
           V+A     F ++ + I      K+   A ++FN +   KG   N   Y  ++  L   ++
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP-LKGCRRNEVAYTHLIHGLCVARR 303

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
            +    +  +M  + C      +  L+K           L +  ++   T  KP++   +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE-TGIKPNIHTYT 362

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
             ++ L    + + A+  L    Q L   L PN   +N LI  +CKRG +E A +V++ M
Sbjct: 363 VLIDSLCSQCKFEKARELL---GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           +  ++S PN  TY+ LI G CK+    +A+ +  +M+ + ++LPD +TYN LIDG CR G
Sbjct: 420 ESRKLS-PNTRTYNELIKGYCKSN-VHKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRSG 476

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
             D A +++  M + G  P+ + YT++++  CK  +++EA ++FD ++   + P+ + YT
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LI+ +C+AG+VDEA  +L++M  + C  + +TFN ++ GLC +GK++EA  + EK+   
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G+    ++  I+++   + G+ + A    + ML  G  P   T    +   C+ G   DA
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +  + E G  P+  +++ L++      +  FAF++L  +
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 172/318 (54%), Gaps = 5/318 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    + +LIK  C       A  ++KEM+++ +  PN+ TY+ LID LC   +F +A E
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK-PNIHTYTVLIDSLCSQCKFEKARE 379

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  +M+ K  ++P+ +TYN LI+G+C+ G ++ A  ++E M++   +PN   Y  L+ G+
Sbjct: 380 LLGQMLEKG-LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK   + +A  V ++M    + PD + Y +LI+  CR+G  D A  LL  M +RG   D 
Sbjct: 439 CK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+  ++  LC+  ++EEA  + + L   G+  N   Y  +++  C+ G++++A  +L  
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML +  LP+  T N L+  LC  G  ++A +    +V++G +P   +  +L+  + +   
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617

Query: 500 LLFAFELLDELVIKESGT 517
              A+    +++   SGT
Sbjct: 618 FDHAYSRFQQML--SSGT 633



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 226/493 (45%), Gaps = 58/493 (11%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           IS     SL   + +P+ AL   + +S+   + H+  +YA++L  L     +  V   +R
Sbjct: 88  ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLIN-NGYVGVVFKIR 146

Query: 120 QMTYETC-KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
            +  ++C    + ++               VL++  K++   R +   K I  C N L+ 
Sbjct: 147 LLMIKSCDSVGDALY---------------VLDLCRKMNKDERFELKYKLIIGCYNTLLN 191

Query: 179 S----------NQV-------DLAQNFLKY---------------SNQHLR------LKP 200
           S           QV        +  N   Y               +NQ++       L P
Sbjct: 192 SLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP 251

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +  LI  +C+R  L+SAF+V  EM        N + Y+ LI GLC   R  EA++L
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR-NEVAYTHLIHGLCVARRIDEAMDL 310

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M   D+  P   TY VLI   C   +   A  +++ M+  G  PN+  YT L++  C
Sbjct: 311 FVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            + K ++A+E+  +M    L P+ I Y  LIN +C+ G +++A+++++ M+ R    +  
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N ++ G C+   + +A+G+L K+    +  +  +Y  +++  C+ G  + A  LL LM
Sbjct: 430 TYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG +P   T   ++  LCK+   E+A      L + G  P    +  L++  C+  K+
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548

Query: 501 LFAFELLDELVIK 513
             A  +L++++ K
Sbjct: 549 DEAHLMLEKMLSK 561



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 221/453 (48%), Gaps = 48/453 (10%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P+C   +  +VS  +      +T  T+   + R ++F +V  +LR +  E         
Sbjct: 6   QPRCNSGLTGSVSAFEVLKKKFSTDVTVPSPVTR-RQFCSVSPLLRNLPEEES------- 57

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL------AQN 187
                   + S+  R+L +  K  P   + PSLK++ + ++    S+   L      A N
Sbjct: 58  -------DSMSVPHRLLSILSK--PNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALN 108

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS---------------- 231
           F  + +Q+ R K +   +  L+      G +   F++   M KS                
Sbjct: 109 FSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRK 168

Query: 232 -------QMSYPNLIT-YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                  ++ Y  +I  Y+TL++ L + G   E  +++ EM+ +D++ P+  TYN +++G
Sbjct: 169 MNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML-EDKVCPNIYTYNKMVNG 227

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+ G V+ A + +  +   G +P+ F YT+L+ G+C+   L  A +VF+EM     + +
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRN 287

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + YT LI+  C A R+DEA++L  +MK+  C   + T+ +++  LC   +  EAL +++
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   GI  N  +Y ++++  C + + EKA ELL  ML +G +P+  T N L+   CK G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           M EDA   +  +      P + ++  L++  C+
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 200/444 (45%), Gaps = 27/444 (6%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+ G   N  TY  ++D L    KFE    +L QM  +    +   +  L+  +    + 
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCI 204
           E  +++   +     E   L   +   N LI+          +   N+ L  K  P+   
Sbjct: 410 EDAVDVVELM-----ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVT 464

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   C+ G  +SA+ +L  M    +  P+  TY+++ID LCK+ R  EA +LF+ +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGL-VPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  + P+ + Y  LIDG+C+ GKVD A  ++E M +  C PN   +  L++G C +GK
Sbjct: 524 EQKG-VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+EA  + ++M    L+P     T LI+   + G  D A    ++M   G K D  T+  
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            +   CREG++ +A  M+ K+  +G+  +  +Y  ++      G+   A ++L+ M   G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702

Query: 445 FLPHYATSNELLVRLCK----------------AGMAE-DAAIALF-GLVEMGFKPESDS 486
             P   T   L+  L +                + M E D  + L   +VE    P + S
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762

Query: 487 WALLVELICRGRKLLFAFELLDEL 510
           +  L+  IC    L  A ++ D +
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHM 786



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 186/407 (45%), Gaps = 59/407 (14%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P     ++ ++ L +S +V+ A +    S +   + PN  ++  LI  +CK G ++ A  
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFD-SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L++M  S+   PN +T++ LI GLC +G+ +EA  L E+MV K  + P   T  +LI  
Sbjct: 554 MLEKML-SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV-KIGLQPTVSTDTILIHR 611

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             + G  D A    + M ++G  P+   YTT +  +C+EG+L +A+++  +M+   + PD
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC--REGK------- 394
              Y++LI  +   G+ + A ++LK M++ GC+    TF  ++  L   + GK       
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731

Query: 395 ---------IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE-------------- 431
                     +  + +LEK+    +  N  SY  ++   C+ G L               
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791

Query: 432 ----------------------KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
                                 +A +++  M+C G LP   +   L+  L K G  E   
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
                L++ G+  +  +W ++++ + +   +   +EL +  V++++G
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN--VMEKNG 896



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 1/171 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            ++  E+L++M +  ++ PN  +Y  LI G+C+ G  R A ++F+ M   + I P  L +
Sbjct: 741 FDTVVELLEKMVEHSVT-PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N L+   C+  K + A K+++ M   G  P + +   L+ G  K+G+ +    VF  +  
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
                D + +  +I+   + G V+   EL   M++ GCK    T+++++ G
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 174/311 (55%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FNI I+  CK G+L+ A  +L  + +  +  P+++TY+T+I GLC+  R  EA E
Sbjct: 328 PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLR-PDVVTYNTVICGLCRKSRVVEAEE 386

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              +MV+     P+  TYN +IDG+C+ G V  A +I++     G  P+ F Y +L+NGF
Sbjct: 387 CLHKMVN-GGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C++G   +A  VF +     L+P  I Y TLI   C+ G +  AL+L+ EM E+GCK DI
Sbjct: 446 CQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDI 505

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N+I+ GLC+ G + +A  ++      G   +  +Y  +++  C++ +L+ AIEL+  
Sbjct: 506 WTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 565

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +G  P   T N LL  LCK   +E+       + E G  P   ++  ++E +C  +K
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 625

Query: 500 LLFAFELLDEL 510
           +  A +LL E+
Sbjct: 626 VNEAVDLLGEM 636



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 171/319 (53%), Gaps = 5/319 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+  ++N LIK  C++G +  A +++ EM +     P++ TY+ +I+GLCK G   +A
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCK-PDIWTYNLIINGLCKMGCLSDA 524

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L  + ++K  I PD  TYN L+DG+CR  K+D A +++  M + G  P+V  Y TL+N
Sbjct: 525 NHLIGDAITKGCI-PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK  K +E  E+F  M      P+ I Y T+I   C + +V+EA++LL EMK +G   
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTP 643

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKL--WYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           D+V+F  ++ G C+ G ++ A G+   +   YD +    A+Y I+++   ++  ++ A+ 
Sbjct: 644 DVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYD-VSHTTATYNIIISAFSEQLNMKMALR 702

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   M   G  P   T   L+   CK G        L   +E GF P   ++  ++  +C
Sbjct: 703 LFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLC 762

Query: 496 RGRKLLFAFELLDELVIKE 514
              K+  A  ++  +V K+
Sbjct: 763 VEHKVQEAVGIIHLMVQKD 781



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 216/428 (50%), Gaps = 7/428 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-TCKFHEGIFLNLMKHFSNCSLH 146
           ++GF H   TY ++L KL  + KF  ++ +L +M         EG+++  M+ +      
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKI 171

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIF 205
           +  ++ F ++     + PS+ + +  +N+L+E    + A   +++  ++  +++ +   +
Sbjct: 172 QEAVDTFERMDLFNCD-PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDK--KVESDVYTY 228

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
            I IK  C+ G   +A  +L+ M      + N + Y T++ G  + G    A ELF+EM+
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLG-CFSNAVAYCTVVTGFYEFGDNDRARELFDEML 287

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +  + PD  T+N L+   C+ G V  ++++ + +   G  PN+F +   + G CKEG L
Sbjct: 288 -ECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A  +   +    L+PD + Y T+I   CR  RV EA E L +M   G + +  T+N I
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G C++G + +A  +L+   + G   ++ +Y  ++N  CQ G+ ++A+ + +  L +G 
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P     N L+  LC+ G+   A   +  + E G KP+  ++ L++  +C+   L  A  
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 506 LLDELVIK 513
           L+ + + K
Sbjct: 527 LIGDAITK 534



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 167/313 (53%), Gaps = 3/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+   +  L+   C+ G  + A  V K+     +  P++I Y+TLI GLC+ G    A
Sbjct: 431 FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLR-PSIIVYNTLIKGLCQQGLILPA 489

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L  EM  K    PD  TYN++I+G C+ G +  A  ++      GC P++F Y TL++
Sbjct: 490 LQLMNEMAEKG-CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 548

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C++ KL  A E+ + M +  + PD I Y TL+N  C+  + +E +E+ K M E+GC  
Sbjct: 549 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I+T+N I+  LC   K+ EA+ +L ++   G+  +  S+  ++   C+ G+L+ A  L 
Sbjct: 609 NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLF 668

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICR 496
           R M  +  + H   +  +++      +    A+ LF  + + G  P++ ++ +L++  C+
Sbjct: 669 RGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCK 728

Query: 497 GRKLLFAFELLDE 509
              +   ++ L E
Sbjct: 729 TGNVNQGYKFLLE 741



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 173/344 (50%), Gaps = 3/344 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L   +  +  L +   +D A   L   ++   L+P+   +N +I   C++  +  A E
Sbjct: 328 PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSRE-GLRPDVVTYNTVICGLCRKSRVVEAEE 386

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            L +M       PN  TY+++IDG CK G   +A  + ++ V K    PD  TY  L++G
Sbjct: 387 CLHKMVNGGFE-PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKG-FKPDEFTYCSLVNG 444

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+ G  D+A  + +     G  P++  Y TL+ G C++G +  A ++ +EM     KPD
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y  +IN  C+ G + +A  L+ +   +GC  DI T+N ++ G CR+ K++ A+ ++ 
Sbjct: 505 IWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVN 564

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++W  G+  +  +Y  +LN  C+  + E+ +E+ + M  +G  P+  T N ++  LC + 
Sbjct: 565 RMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSK 624

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              +A   L  +   G  P+  S+  L+   C+   L  A+ L 
Sbjct: 625 KVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLF 668



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 184/396 (46%), Gaps = 44/396 (11%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDA--VLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           GF  N+ TY +I+D     KK   VDA  +L+   ++  K  E  + +L+  F      +
Sbjct: 395 GFEPNDFTYNSIIDGYC--KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + + +F K       +PS+   +T +  L +   +  A   +    +    KP+   +N+
Sbjct: 453 QAMAVF-KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEK-GCKPDIWTYNL 510

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK G L  A  ++ +   ++   P++ TY+TL+DG C+  +   AIEL   M S+
Sbjct: 511 IINGLCKMGCLSDANHLIGD-AITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD +TYN L++G C+  K +   +I + M   GC PN+  Y T++   C   K+ E
Sbjct: 570 G-MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNE 628

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA------------------------ 363
           A ++  EMK+  L PD + + TLI  FC+ G +D A                        
Sbjct: 629 AVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIII 688

Query: 364 ------------LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
                       L L  EMK+ GC  D  T+ +++ G C+ G + +    L +    G  
Sbjct: 689 SAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFI 748

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            +  ++  VLN  C + ++++A+ ++ LM+ +  +P
Sbjct: 749 PSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVP 784



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 9/252 (3%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++D   R  K ++   ++ +M  +        +  L+      +  E V+E+F  +
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601

Query: 157 HPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
                EK   P++   +T +  L  S +V+ A + L    +   L P+   F  LI   C
Sbjct: 602 ----TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLG-EMKSKGLTPDVVSFGTLITGFC 656

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G L+ A+ + + M+K         TY+ +I    +    + A+ LF EM  K+   PD
Sbjct: 657 KVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEM-KKNGCDPD 715

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
             TY VLIDGFC+ G V++  K +      G  P++  +  ++N  C E K+QEA  +  
Sbjct: 716 NYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIH 775

Query: 334 EMKNFLLKPDTI 345
            M    + PDT+
Sbjct: 776 LMVQKDIVPDTV 787


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 241/481 (50%), Gaps = 38/481 (7%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           ++ ++ + +P+ AL++ N+   ++ F  + A Y  I+ KL     F+ ++ ++R+M  E 
Sbjct: 60  LTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREG 119

Query: 126 CKFHEGIFLNLMKHFS-----------------------NCSLHERVLEMFHK------I 156
            +   G+  + ++ ++                       + +++  +L +  +      +
Sbjct: 120 HEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLL 179

Query: 157 HPITRE------KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
             +  E      +P +  ++T +  L  ++QV  A   L+  + H  + P+   F  L++
Sbjct: 180 ESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH-AVAPDETTFTTLMQ 238

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
              + G++E+A  V  +M ++  S P  +T + LI+G CK GR  +A+   ++ ++ D  
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCS-PTRVTVNVLINGYCKMGRVEDALGYIQKEIA-DGF 296

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PD +TYN  +   C+ G V  A K+M+ M   G +P+VF Y T++N   K G+L EAK 
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 356

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + ++M +    PDT  + TLI   C   R++EAL+L +E+  +G   D+ TFNI++  LC
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + G     + + E++   G   ++ +Y I+++  C  G+L  A++LL+ M   G      
Sbjct: 417 KVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTV 476

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N ++  LCK    E+A      +   G    + ++  L++ +C+ +++  A EL++++
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 536

Query: 511 V 511
           V
Sbjct: 537 V 537



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 198/353 (56%), Gaps = 8/353 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESA 221
           P +   +T +N L ++ ++D A+  +   NQ +     P+T  FN LI   C +  LE A
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIV---NQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++ +E+    +S P++ T++ LI+ LCK G     I LFEEM S     PD +TYN+LI
Sbjct: 390 LDLARELTVKGLS-PDVYTFNILINALCKVGDPHLGIRLFEEMKSSG-CAPDEVTYNILI 447

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C  GK+  A  +++ M++NGC  +   Y T+++  CK+ +++EA+EVFD+M    + 
Sbjct: 448 DHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGIS 507

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
              + + TLI+  C+A R+D+A EL+++M + G +   +T+N IL   C++G +++A  +
Sbjct: 508 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADI 567

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LE +  +G  ++  +Y  ++N  C+ G  + A++LLR M  +G  P     N ++  L +
Sbjct: 568 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 627

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GRKLLFAFELLDELVIK 513
                DA      + E+G  P++ ++ ++   +CR G  +  AF+ L E+V K
Sbjct: 628 RNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNK 680



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 157/314 (50%), Gaps = 1/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  ++  +I+     G  +    +++EM++        +  S  ++   +  RF +A++
Sbjct: 87  PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRS-FVESYARLRRFDDAVD 145

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L    ++   +  D   YN L++    G ++   + +   M + G  P+V    TL+   
Sbjct: 146 LVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKAL 205

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+  +++ A  + +EM +  + PD   +TTL+  F   G ++ AL +  +M E GC    
Sbjct: 206 CRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTR 265

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT N+++ G C+ G++E+ALG ++K   DG   ++ +Y   ++  CQ G +  A++++ L
Sbjct: 266 VTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML  G  P   T N ++  L K G  ++A   +  +V+ G  P++ ++  L+  +C   +
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR 385

Query: 500 LLFAFELLDELVIK 513
           L  A +L  EL +K
Sbjct: 386 LEEALDLARELTVK 399


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 223/430 (51%), Gaps = 6/430 (1%)

Query: 75  PQCALEIFNTVSEQKG-FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           PQ      NT S + G +   + ++ ++++  +    F +++ +L QM  E   F E  F
Sbjct: 44  PQIFKSPSNTSSHKWGSYKLGDLSFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSF 103

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY-- 191
           + + K +    L ++ L++FH++      K ++K+ +T LN++I+    DLA  F  +  
Sbjct: 104 IIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVI 163

Query: 192 -SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            SN    ++PN   FN++IK  C+ G ++ A EV + M        +  TYSTL+ GLC 
Sbjct: 164 DSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRN-CVADGYTYSTLMHGLCN 222

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            GR  EA+ L +EM   +   P+ + +NVLI   C+ G + RA K+++ M   GC PN  
Sbjct: 223 EGRIDEAVSLLDEM-QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEV 281

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y +L++G C +GKL +A  + + M      P+ I + TL++ F + GR  + + +L  +
Sbjct: 282 TYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSL 341

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +E+G + +  +++ ++ GL +EGK E  + + +++   G   N   Y  +++  C++G+ 
Sbjct: 342 EEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKP 401

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           ++A E L  M  +G  P+  T + L+    +AG    A +    + +         +++L
Sbjct: 402 DEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSIL 461

Query: 491 VELICRGRKL 500
           +  +C+  KL
Sbjct: 462 INGLCKNGKL 471



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 220/485 (45%), Gaps = 67/485 (13%)

Query: 78  ALEIFNTVSEQKGFNH---NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
           ALE +N V +   F++   N  ++  ++  L R    +    V R M+   C      + 
Sbjct: 155 ALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYS 214

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            LM    N    +  + +  ++  +    P+  A +  ++ L +   +  A   +   N 
Sbjct: 215 TLMHGLCNEGRIDEAVSLLDEMQ-VEGTFPNPVAFNVLISALCKKGDLSRASKLV--DNM 271

Query: 195 HLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            L+   PN   +N L+   C +G L+ A  +L  M  ++   PN IT+ TL+DG  K+GR
Sbjct: 272 FLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK-CVPNDITFGTLVDGFVKHGR 330

Query: 254 ------------------------------FREA-----IELFEEMVSKDQILPDALTYN 278
                                         F+E      ++L++EMV K    P+ + Y+
Sbjct: 331 ALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG-CKPNTIVYS 389

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            LIDG CR GK D AK+ +  MKN G  PN F Y++LM G+ + G + +A  V+ EM + 
Sbjct: 390 ALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDN 449

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
                 + Y+ LIN  C+ G++ EAL + K+M  RG K D+V ++ ++ G C    +E+ 
Sbjct: 450 DCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQG 509

Query: 399 LGMLEKLWYDGIYL--NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN--- 453
           + +  ++      L  +  +Y I+LN  C K  + +AI++L  ML +G  P + T +   
Sbjct: 510 MKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFL 569

Query: 454 ------------------ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
                             EL+VRL K      A+  +  +++    P+  +WAL V+ +C
Sbjct: 570 KTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLC 629

Query: 496 RGRKL 500
           +  K+
Sbjct: 630 KPMKV 634



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 160/309 (51%), Gaps = 3/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F I+ K + K    + A ++   M         + +++T+++ + + G F  A+E +  +
Sbjct: 103 FIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHV 162

Query: 265 VSKD---QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           +  +    I P+ L++N++I   CR G VD+A ++   M +  C  + + Y+TLM+G C 
Sbjct: 163 IDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCN 222

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           EG++ EA  + DEM+     P+ + +  LI+  C+ G +  A +L+  M  +GC  + VT
Sbjct: 223 EGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVT 282

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N ++ GLC +GK+++A+ +L ++  +    N  ++  +++   + G     + +L  + 
Sbjct: 283 YNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLE 342

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            +G+  +  + + L+  L K G  E        +VE G KP +  ++ L++ +CR  K  
Sbjct: 343 EKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPD 402

Query: 502 FAFELLDEL 510
            A E L E+
Sbjct: 403 EAKEYLIEM 411



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 132/263 (50%), Gaps = 4/263 (1%)

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA----KKIMEFMKNNGCNPNVF 310
           ++A++LF  M ++        ++N +++   + G  D A      +++    +   PN  
Sbjct: 117 QKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGL 176

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           ++  ++   C+ G + +A EVF  M +     D   Y+TL++  C  GR+DEA+ LL EM
Sbjct: 177 SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM 236

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +  G   + V FN+++  LC++G +  A  +++ ++  G   N+ +Y  +++  C KG+L
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKL 296

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           +KA+ LL  M+    +P+  T   L+    K G A D    L  L E G++    S++ L
Sbjct: 297 DKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSL 356

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           +  + +  K     +L  E+V K
Sbjct: 357 ISGLFKEGKGEHGMQLWKEMVEK 379


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 220/438 (50%), Gaps = 18/438 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +I N +S   GF  +  +Y T+L  L   K++E V+ +  +M    C  +E  F  L+
Sbjct: 226 ARQILNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLV 284

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSN 193
           + F    + ER +E+  ++      +    A +T  N++I S     +VD A  FL    
Sbjct: 285 RFFCRGGMVERAIEVLDRM-----SEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMG 339

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            +    P+T  +  ++K  C+ G  E A E+L EM +     PN +T++T I  LC+ G 
Sbjct: 340 SY-GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCP-PNEVTFNTFICILCQKGL 397

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +AI L E+M      +   +TYN L++GFC  G+VD A   +E   +  C PN   YT
Sbjct: 398 IDQAILLIEQMPEYGCSV-GIVTYNALVNGFCVQGRVDSA---LELFNSLPCEPNTITYT 453

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+ G C   +L  A E+  EM       + + +  L++ FC+ G V+EA+EL+++M E 
Sbjct: 454 TLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEH 513

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  +++TFN +L G+  +   EEAL +L  L   GI L+  +Y  +++   ++  +E+A
Sbjct: 514 GCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEA 573

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVE 492
           +++   +   G  P     N++L  LCK     D AI  F  +V     P   ++ +L+E
Sbjct: 574 VQMFHAVQDMGMRPKAVMYNKILSALCKR-CETDRAIDFFAHMVSNSCMPNESTYVILIE 632

Query: 493 LICRGRKLLFAFELLDEL 510
            + R   L  A  +L EL
Sbjct: 633 GLAREGLLKEARYVLSEL 650



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 230/473 (48%), Gaps = 30/473 (6%)

Query: 53  ARKRSRFISHGAAISLIKCEK---------EPQCALEIFNTVSEQKGFNHNNATYATILD 103
           AR   R  S G A  +  C K             A  +  T +E  G   +   Y T++ 
Sbjct: 55  ARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRT-AEGSGAPVDVFAYNTLVA 113

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE- 162
              RY + +A   ++  M      +    +  L++   +     RV +    +  + R  
Sbjct: 114 GYCRYGRLDAARRLIASMPVPPDAY---TYTPLIRGLCD---RGRVGDALSLLDDMLRRE 167

Query: 163 -KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTL 218
            +PS+   +  L  + +S+    A   L      +R K   PN   +N++I   C+   +
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVL----DEMRAKGCTPNIVTYNVIINGMCREDRV 223

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           + A ++L  +       P+ ++Y+T++ GLC   R+ +   LF EMV ++  +P+ +T++
Sbjct: 224 DDARQILNRLSSYGFQ-PDTVSYTTVLKGLCAAKRWEDVEVLFCEMV-ENNCVPNEVTFD 281

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           +L+  FCRGG V+RA ++++ M  +GC  N      ++N  CK+G++ +A E  + M ++
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              PDTI YTT++   CRAGR ++A ELL EM  + C  + VTFN  +  LC++G I++A
Sbjct: 342 GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           + ++E++   G  +   +Y  ++N  C +G ++ A+EL   + C    P+  T   LL  
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTG 458

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           LC A   + AA  L  +++        ++ +LV   C+   +  A EL+ +++
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMM 511



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 160/314 (50%), Gaps = 5/314 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LI++ C+RG    A  VL+  + S     ++  Y+TL+ G C+ GR   A  
Sbjct: 68  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPV-DVFAYNTLVAGYCRYGRLDAARR 126

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M     + PDA TY  LI G C  G+V  A  +++ M    C P+V  YT L+   
Sbjct: 127 LIASM----PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAV 182

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK     +A +V DEM+     P+ + Y  +IN  CR  RVD+A ++L  +   G + D 
Sbjct: 183 CKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDT 242

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++  +L GLC   + E+   +  ++  +    N+ ++ +++ F C+ G +E+AIE+L  
Sbjct: 243 VSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDR 302

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G   +    N ++  +CK G  +DA   L  +   G  P++ S+  +++ +CR  +
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362

Query: 500 LLFAFELLDELVIK 513
              A ELL+E+V K
Sbjct: 363 WEDAKELLNEMVRK 376



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 32/250 (12%)

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A +++E   + G  P+V+  T L+   C+ G+  +A  V    +      D   Y TL+ 
Sbjct: 54  AARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVA 113

Query: 353 CFCRAGRVD--------------------------------EALELLKEMKERGCKADIV 380
            +CR GR+D                                +AL LL +M  R C+  +V
Sbjct: 114 GYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVV 173

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+ ++L  +C+     +A+ +L+++   G   N  +Y +++N  C++  ++ A ++L  +
Sbjct: 174 TYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRL 233

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              GF P   +   +L  LC A   ED  +    +VE    P   ++ +LV   CRG  +
Sbjct: 234 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMV 293

Query: 501 LFAFELLDEL 510
             A E+LD +
Sbjct: 294 ERAIEVLDRM 303



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 32/207 (15%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA  + +   +    PD    T LI   CR GR  +A  +L+  +  G   D+  +N 
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 385 ILGGLCREGKIE--------------------------------EALGMLEKLWYDGIYL 412
           ++ G CR G+++                                +AL +L+ +       
Sbjct: 111 LVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQP 170

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y ++L   C+     +A+++L  M  +G  P+  T N ++  +C+    +DA   L
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQIL 230

Query: 473 FGLVEMGFKPESDSWALLVELICRGRK 499
             L   GF+P++ S+  +++ +C  ++
Sbjct: 231 NRLSSYGFQPDTVSYTTVLKGLCAAKR 257


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 221/430 (51%), Gaps = 18/430 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
           + G+  +  T+ T++  L  + K     A++ +M    C+      G+ +N +    +  
Sbjct: 107 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 166

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
           L      + +K+     E   ++A     N +I+S      VD A N  K   +   ++P
Sbjct: 167 L---AFNLLNKM-----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRP 217

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   ++ LI   C  G    A ++L +M + +++ PNL+T++ LID   K G+F EA +L
Sbjct: 218 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKL 276

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M+ K  I PD  TYN LI+GFC   ++D+AK++ EFM +  C P++  Y TL+ GFC
Sbjct: 277 HDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 335

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  ++++  E+F EM +  L  DT+ YTTLI      G  D A ++ K+M   G   DI+
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++I+L GLC  GK+E+AL + + +    I L+   Y  ++   C+ G+++   +L   +
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G  P+  T N ++  LC   + ++A   L  + E G  P+S ++  L+    R    
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515

Query: 501 LFAFELLDEL 510
             + EL+ E+
Sbjct: 516 AASAELIREM 525



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 217/465 (46%), Gaps = 57/465 (12%)

Query: 98  YATILDKLARYKKFEAVDAV-----LRQMTYETCKFHEGIFLNLMKHFSNCS----LHER 148
           +  +L  +A+ KKF+ V ++     + ++ YE         LN   H    S    L ++
Sbjct: 45  FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 104

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           ++EM ++   IT         +T ++ L   N+   A   +    Q    +PN   + ++
Sbjct: 105 MVEMGYRPDTIT--------FTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVV 155

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +   CKRG ++ AF +L +M+ +++   +++ ++T+ID LCK     +A+ LF+EM +K 
Sbjct: 156 VNGLCKRGDIDLAFNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHVDDALNLFKEMETK- 213

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            I P+ +TY+ LI   C  G+   A +++  M     NPN+  +  L++ F KEGK  EA
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273

Query: 329 KEVFDEMKNFLLKPDTIGYTTLIN-----------------------------------C 353
           +++ D+M    + PD   Y +LIN                                    
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           FC++ RV++  EL +EM  RG   D VT+  ++ GL  +G  + A  + +++  DG+  +
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y I+L+  C  G+LEKA+E+   M              ++  +CKAG  +D      
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
            L   G KP   ++  ++  +C  R L  A+ LL ++  KE G +
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPL 496



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 6/300 (2%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL---PDA 274
           L+ A  +   M KS+   P++  ++ L+  + K  +F   I L   ++ K   L   P  
Sbjct: 23  LDDAIGLFGGMVKSR-PLPSIFEFNKLLSAIAKMKKFDLVISL--ALLGKMMKLGYEPSI 79

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +T + L++G+C G ++  A  +++ M   G  P+   +TTL++G     K  EA  + D 
Sbjct: 80  VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 139

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M     +P+ + Y  ++N  C+ G +D A  LL +M+    +AD+V FN I+  LC+   
Sbjct: 140 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 199

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +++AL + +++   GI  N  +Y  +++  C  G    A +LL  M+ +   P+  T N 
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L+    K G   +A      +++    P+  ++  L+   C   +L  A ++ + +V K+
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 221/430 (51%), Gaps = 18/430 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
           + G+  +  T+ T++  L  + K     A++ +M    C+      G+ +N +    +  
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
           L      + +K+     E   ++A     N +I+S      VD A N  K   +   ++P
Sbjct: 168 L---AFNLLNKM-----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRP 218

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   ++ LI   C  G    A ++L +M + +++ PNL+T++ LID   K G+F EA +L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKL 277

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M+ K  I PD  TYN LI+GFC   ++D+AK++ EFM +  C P++  Y TL+ GFC
Sbjct: 278 HDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  ++++  E+F EM +  L  DT+ YTTLI      G  D A ++ K+M   G   DI+
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++I+L GLC  GK+E+AL + + +    I L+   Y  ++   C+ G+++   +L   +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G  P+  T N ++  LC   + ++A   L  + E G  P+S ++  L+    R    
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516

Query: 501 LFAFELLDEL 510
             + EL+ E+
Sbjct: 517 AASAELIREM 526



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 219/474 (46%), Gaps = 55/474 (11%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNC 143
           ++ G +HN  TY  +++   R  +     A+L +M    YE         LN   H    
Sbjct: 37  QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96

Query: 144 S----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
           S    L ++++EM ++   IT         +T ++ L   N+   A   +    Q    +
Sbjct: 97  SDAVALVDQMVEMGYRPDTIT--------FTTLIHGLFLHNKASEAVALVDRMVQR-GCQ 147

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   + +++   CKRG ++ AF +L +M+ +++   +++ ++T+ID LCK     +A+ 
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHVDDALN 206

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+EM +K  I P+ +TY+ LI   C  G+   A +++  M     NPN+  +  L++ F
Sbjct: 207 LFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN--------------------------- 352
            KEGK  EA+++ D+M    + PD   Y +LIN                           
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325

Query: 353 --------CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
                    FC++ RV++  EL +EM  RG   D VT+  ++ GL  +G  + A  + ++
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +  DG+  +  +Y I+L+  C  G+LEKA+E+   M              ++  +CKAG 
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
            +D       L   G KP   ++  ++  +C  R L  A+ LL ++  KE G +
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPL 497



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 147/276 (53%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++  ++ L+  + K  +F   I L E+M  +  I  +  TYN+LI+ FCR  ++  A  
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M   G  P++   ++L+NG+C   ++ +A  + D+M     +PDTI +TTLI+   
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
              +  EA+ L+  M +RGC+ ++VT+ +++ GLC+ G I+ A  +L K+    I  +  
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            +  +++  C+   ++ A+ L + M  +G  P+  T + L+  LC  G   DA+  L  +
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +E    P   ++  L++   +  K + A +L D+++
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 156/315 (49%), Gaps = 2/315 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FN L+    K    +    + ++M++  +S+ NL TY+ LI+  C+  +   A+ 
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLALA 66

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  +M+ K    P  +T + L++G+C G ++  A  +++ M   G  P+   +TTL++G 
Sbjct: 67  LLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
               K  EA  + D M     +P+ + Y  ++N  C+ G +D A  LL +M+    +AD+
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V FN I+  LC+   +++AL + +++   GI  N  +Y  +++  C  G    A +LL  
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +   P+  T N L+    K G   +A      +++    P+  ++  L+   C   +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305

Query: 500 LLFAFELLDELVIKE 514
           L  A ++ + +V K+
Sbjct: 306 LDKAKQMFEFMVSKD 320



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 125/249 (50%), Gaps = 2/249 (0%)

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K + LP    +N L+    +  K D    + E M+  G + N++ Y  L+N FC+  ++ 
Sbjct: 3   KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A  +  +M     +P  +  ++L+N +C   R+ +A+ L+ +M E G + D +TF  ++
Sbjct: 63  LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL    K  EA+ +++++   G   N  +Y +V+N  C++G+++ A  LL  M      
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFE 505
                 N ++  LCK    +D A+ LF  +E  G +P   +++ L+  +C   +   A +
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 506 LLDELVIKE 514
           LL +++ K+
Sbjct: 242 LLSDMIEKK 250


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 176/300 (58%), Gaps = 3/300 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +  L  +   +     L   ++H    P+  ++  +I   CK G LE A E
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVANE 307

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L  M    +  PN++ Y+T++ GLC   R++EA EL  EM  KD  L D +T+N+L+D 
Sbjct: 308 ILNRMPSYGLK-PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD-VTFNILVDF 365

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+ G VDR  +++E M ++GC P+V  YTT++NGFCKEG + EA  +   M +   KP+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ YT ++   C AGR  +A EL+ +M ++GC  + VTFN ++  LC++G +E+A+ +L+
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  +G   +  SY  V++   + G+ E+A+ELL +M+ +G  P+    + +   L + G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 178/341 (52%), Gaps = 3/341 (0%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           LN + E   VD A   L+        + +   +N ++K  C         E++ EM +  
Sbjct: 188 LNAICEQGCVDEAVGLLR-KLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            + PN++T++TLI  LC+NG F    E+  +M S+    PD   Y  +IDG C+ G ++ 
Sbjct: 247 CA-PNIVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEV 304

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A +I+  M + G  PNV  Y T++ G C   + +EA+E+  EM       D + +  L++
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FC+ G VD  +ELL++M   GC  D++T+  ++ G C+EG I+EA+ +L+ +   G   
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N  SY IVL   C  G    A EL+  M+ +G  P+  T N L+  LCK G+ E A   L
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++  G  P+  S++ +++ + +  K   A ELL+ +V K
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 173/322 (53%), Gaps = 5/322 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN LI + C+ G  E   EVL +M +   + P++  Y+T+IDG+CK G    A E
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT-PDIRMYATIIDGICKEGHLEVANE 307

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M S   + P+ + YN ++ G C   +   A++++  M    C  +   +  L++ F
Sbjct: 308 ILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G +    E+ ++M +    PD I YTT+IN FC+ G +DEA+ LLK M   GCK + 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++ I+L GLC  G+  +A  ++ ++   G   N  ++  ++NF C+KG +E+AIELL+ 
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
           ML  G  P   + + ++  L KAG  E+A   L  +V  G  P +  ++ +   + R GR
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 499 --KLLFAFELLDELVIKESGTI 518
             K++  F+ + +  I+    +
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVL 568



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 174/307 (56%), Gaps = 2/307 (0%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N+++   C++G ++ A  +L+++        ++++Y+ ++ GLC   R+ +  EL +EMV
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCE-ADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
             D   P+ +T+N LI   CR G  +R  +++  M  +GC P++  Y T+++G CKEG L
Sbjct: 244 RVD-CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A E+ + M ++ LKP+ + Y T++   C A R  EA ELL EM ++ C  D VTFNI+
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +   C+ G ++  + +LE++   G   +  +Y  V+N  C++G +++A+ LL+ M   G 
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+  +   +L  LC AG   DA   +  +++ G  P   ++  L+  +C+   +  A E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 506 LLDELVI 512
           LL ++++
Sbjct: 483 LLKQMLV 489



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 192/375 (51%), Gaps = 4/375 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  T+ T++  L R   FE V  VL QM+   C     ++  ++         E   E+ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +++ P    KP++   +T L  L  + +   A+  L    Q      +   FNIL+   C
Sbjct: 310 NRM-PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCPLDDVTFNILVDFFC 367

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           + G ++   E+L++M  S    P++ITY+T+I+G CK G   EA+ L + M S     P+
Sbjct: 368 QNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-SSCGCKPN 425

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            ++Y +++ G C  G+   A+++M  M   GC PN   + TL+N  CK+G +++A E+  
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           +M      PD I Y+T+I+   +AG+ +EALELL  M  +G   + + ++ I   L REG
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++ + + M + +    I  +   Y  V++  C++ E ++AI+    M+  G +P+ +T  
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 454 ELLVRLCKAGMAEDA 468
            L+  L   G+A++A
Sbjct: 606 MLIKGLASEGLAKEA 620



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 37/349 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFRE 256
           + PN   F  +++  C RG +  A EVL EM  K     P +  Y  +++  C++G FR 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM--YHVILEAACRSGGFRN 164

Query: 257 AIELFEEMVSKDQIL----------------------------------PDALTYNVLID 282
           ++ + E M +K   L                                   D ++YN ++ 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   +    +++M+ M    C PN+  + TL+   C+ G  +   EV  +M      P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y T+I+  C+ G ++ A E+L  M   G K ++V +N +L GLC   + +EA  +L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +++     L+  ++ I+++F CQ G +++ IELL  ML  G +P   T   ++   CK 
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G+ ++A + L  +   G KP + S+ ++++ +C   + + A EL+ +++
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 197/383 (51%), Gaps = 18/383 (4%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E+   +SE  G   +   YATI+D + +    E  + +L +M     K +   +  ++K 
Sbjct: 272 EVLAQMSEH-GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330

Query: 140 FSNCS----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             +        E + EMF K  P+     ++     C N L++   ++L +  L +    
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD-RVIELLEQMLSHG--- 386

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+   +  +I   CK G ++ A  +LK M  S    PN ++Y+ ++ GLC  GR+ 
Sbjct: 387 --CMPDVITYTTVINGFCKEGLIDEAVMLLKSMS-SCGCKPNTVSYTIVLKGLCSAGRWV 443

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A EL  +M+ +    P+ +T+N LI+  C+ G V++A ++++ M  NGC+P++ +Y+T+
Sbjct: 444 DAEELMSQMIQQG-CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G  K GK +EA E+ + M N  + P+TI Y+++     R GRV++ +++   +K+   
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           ++D V +N ++  LC+  + + A+     +  +G   N+++Y +++     +G  ++A E
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622

Query: 436 LLRLMLCRG-----FLPHYATSN 453
           LL  +  RG      + H+  SN
Sbjct: 623 LLSELCSRGALRKHLMRHFGISN 645



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 150/307 (48%), Gaps = 5/307 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++  +C+ G L +A  +   +       PN  T+  ++ GLC  GR  +A+E+ +EM
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K    P    Y+V+++  CR G    + +++E M   GC  +  N   ++N  C++G 
Sbjct: 138 SFKG-CAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  +  ++  F  + D + Y  ++   C A R  +  EL+ EM    C  +IVTFN 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++G LCR G  E    +L ++   G   +   Y  +++  C++G LE A E+L  M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+    N +L  LC A   ++A   L  + +     +  ++ +LV+  C+   +    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 505 ELLDELV 511
           ELL++++
Sbjct: 377 ELLEQML 383



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 10/280 (3%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+ ++ G C+ G+   A  L   +     + P+A T+  ++ G C  G++  A +++
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV----PVPPNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   GC P    Y  ++   C+ G  + +  V + M       DT     ++N  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLC---REGKIEEALGMLEKLWYDGIYLNK 414
           G VDEA+ LL+++   GC+ADIV++N +L GLC   R G +EE   +++++       N 
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEE---LMDEMVRVDCAPNI 251

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            ++  ++ + C+ G  E+  E+L  M   G  P       ++  +CK G  E A   L  
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +   G KP    +  +++ +C   +   A ELL E+  K+
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 29/192 (15%)

Query: 349 TLINCFCRAGRV------------DEALELLKEMKERGCKA-----------------DI 379
            LI   C AGR                +     M    C+A                 + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TF  ++ GLC  G+I +AL +L+++ + G       Y ++L  +C+ G    ++ +L  
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +G        N +L  +C+ G  ++A   L  L   G + +  S+  +++ +C  ++
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 500 LLFAFELLDELV 511
                EL+DE+V
Sbjct: 232 WGDVEELMDEMV 243


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 212/405 (52%), Gaps = 12/405 (2%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           + L+K EK P  AL +F+    + GF+ ++A +  IL ++A         A  R +    
Sbjct: 14  LKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGLLLAHAP-RIIAAIH 72

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
           C   E + L L+K ++   +    L +F  +  +    P++++ +T LN  +ES+Q   A
Sbjct: 73  CPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARA 132

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           +NF KY  +  R+ PN   +N+L+K  CK+G  E    +L  M  + MS P+ ITY TLI
Sbjct: 133 ENFFKYF-EAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMS-PDRITYGTLI 190

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME-FMKNNG 304
            G+ K+G    A+E+F+EM  +  + PD + YN++IDGF + G   +A ++ E  ++   
Sbjct: 191 GGVAKSGDLGFALEVFDEMRERG-VEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREEL 249

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             P+V +Y  +++G CK G+  E  E+++ MK    K D   Y+ LI+    AG +  A 
Sbjct: 250 VFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGAR 309

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           ++ +EM  RG + D+VT N +L GLC+ G +EE   + E++    +  N  SY I L   
Sbjct: 310 KVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGL 368

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVR-LCKAGMAEDA 468
            + G+++ A     +ML  G L   + +  ++V  LC  G    A
Sbjct: 369 FENGKVDDA-----MMLWDGLLEADSATYGVVVHGLCWNGYVNRA 408



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 216/489 (44%), Gaps = 43/489 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  I  +    +   ALE+F+ + E +G   +   Y  I+D   +   F     +  
Sbjct: 184 ITYGTLIGGVAKSGDLGFALEVFDEMRE-RGVEPDVVCYNMIIDGFFKRGDFVKAGEMWE 242

Query: 120 QMTYETCKFHEGIFLNLM-KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           ++  E   F   +  N+M      C      LE++ ++    R K  L   S  ++ L E
Sbjct: 243 RLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNER-KCDLFTYSALIHGLSE 301

Query: 179 SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK------- 230
           +  +  A+    Y     R ++P+    N ++   CK G +E  FE+ +EM K       
Sbjct: 302 AGDLGGARKV--YEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVR 359

Query: 231 -----------------SQMSYPNLI-----TYSTLIDGLCKNGRFREAIELFEEMVSKD 268
                            + M +  L+     TY  ++ GLC NG    A+++ EE   ++
Sbjct: 360 SYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHRE 419

Query: 269 QILP-DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             +  D   Y+ LI+  C+ G++D A  ++E M   GC  N      L++GF K  KL  
Sbjct: 420 GGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDS 479

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A +VF EM         + Y  LIN   RA R  EA + + EM E+G K DI+T++ ++G
Sbjct: 480 AVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIG 539

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL---LRLMLCRG 444
           GL     ++ AL +  +    G   +   Y IV++  C  G++E A++L   LR   C  
Sbjct: 540 GLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVN 599

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            + H    N ++    K G  E A+     ++E   +P+  S+ + ++ +C   ++  A 
Sbjct: 600 LVTH----NTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAV 655

Query: 505 ELLDELVIK 513
             LD+ +++
Sbjct: 656 GFLDDALVR 664



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 37/296 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFRE 256
           L+ ++  + +++   C  G +  A +VL+E +  +     +   YS+LI+ LCK GR  E
Sbjct: 385 LEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDE 444

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  + E +++K     ++   NVLIDGF +  K+D A K+   M   GC+  V +Y  L+
Sbjct: 445 ADGVVE-LMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILI 503

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG  +  + +EA +  +EM     KPD I Y+TLI     +  +D AL L  +  + G K
Sbjct: 504 NGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHK 563

Query: 377 ADIVTFNIILGGLCREGKIEEALG------------------------------MLEKLW 406
            DI+ +NI++  LC  GK+E+AL                               M  K+W
Sbjct: 564 PDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIW 623

Query: 407 Y----DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
                D +  +  SY I L   C  G +  A+  L   L RGFLP   T N +LVR
Sbjct: 624 AHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWN-ILVR 678



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 132/254 (51%), Gaps = 4/254 (1%)

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           A S+ +N L +  ++D A   ++  N+    K N+ + N+LI    K   L+SA +V +E
Sbjct: 428 AYSSLINALCKEGRLDEADGVVELMNKR-GCKFNSHVCNVLIDGFVKHSKLDSAVKVFRE 486

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M     S   +++Y+ LI+GL +  RFREA +   EM+ K    PD +TY+ LI G    
Sbjct: 487 MSGKGCSL-TVVSYNILINGLLRAERFREAYDCVNEMLEKGW-KPDIITYSTLIGGLYES 544

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
             +D A ++     + G  P++  Y  +++  C  GK+++A +++  ++      + + +
Sbjct: 545 NMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTH 603

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            T++  F + G  + A ++   + E   + DI+++NI L GLC  G++ +A+G L+    
Sbjct: 604 NTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALV 663

Query: 408 DGIYLNKASYRIVL 421
            G      ++ I++
Sbjct: 664 RGFLPTAITWNILV 677



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 1/269 (0%)

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TL+    K     EA+ +F+ M       P   ++N L++ F    +  RA+   ++ + 
Sbjct: 82  TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
              +PNV  Y  LM   CK+G+ ++ + +   M    + PD I Y TLI    ++G +  
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG-IYLNKASYRIVL 421
           ALE+  EM+ERG + D+V +N+I+ G  + G   +A  M E+L  +  ++ +  SY +++
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G   + +E+   M          T + L+  L +AG    A      +V  G +
Sbjct: 262 SGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVR 321

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
           P+  +   ++  +C+   +   FEL +E+
Sbjct: 322 PDVVTCNAMLNGLCKAGNVEECFELWEEM 350



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 118/247 (47%), Gaps = 17/247 (6%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E    +E+ N    ++G   N+     ++D   ++ K ++   V R+M+ + C      +
Sbjct: 444 EADGVVELMN----KRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSY 499

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
             L+         ER  E +  ++ +  +  KP +   ST +  L ESN +D A   L+ 
Sbjct: 500 NILINGLLRA---ERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAA---LRL 553

Query: 192 SNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
            +Q L    KP+  ++NI+I   C  G +E A ++   +++ +    NL+T++T+++G  
Sbjct: 554 WHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV--NLVTHNTIMEGFY 611

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K G    A +++  ++ +D++ PD ++YN+ + G C  G+V  A   ++     G  P  
Sbjct: 612 KVGNCEMASKIWAHIL-EDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTA 670

Query: 310 FNYTTLM 316
             +  L+
Sbjct: 671 ITWNILV 677



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 7/170 (4%)

Query: 349 TLINCFCRAGRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           TL+  + +    +EAL + + M    GC   I +FN +L       +   A    +    
Sbjct: 82  TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
             +  N  +Y +++   C+KGE EK   LL  M   G  P   T   L+  + K+G   D
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSG---D 198

Query: 468 AAIALFGLVEM---GFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
              AL    EM   G +P+   + ++++   +    + A E+ + L+ +E
Sbjct: 199 LGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREE 248


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 218/418 (52%), Gaps = 5/418 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+ + + + F  +   +  +L  + + KK++ V ++ ++M     +     F  ++
Sbjct: 69  AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F  C      L +  K+  +  E P    I + +N     N+V  A + +      + 
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVD-KMVEIG 185

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+   +N +I   CK   +  AF+  KE+++  +  PN++TY+ L++GLC + R+ +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR-PNVVTYTALVNGLCNSSRWSDA 244

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L  +M+ K +I P+ +TY+ L+D F + GKV  AK++ E M     +P++  Y++L+N
Sbjct: 245 ARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C   ++ EA ++FD M +     D + Y TLIN FC+A RV++ ++L +EM +RG  +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VT+N ++ G  + G +++A     ++ + GI  +  +Y I+L   C  GELEKA+ + 
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
             M  R       T   ++  +CK G  E+A      L   G KP+  ++  ++  +C
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 172/302 (56%), Gaps = 3/302 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP + A +  ++ L ++ +V+ A +F K   +   ++PN   +  L+   C       A 
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L +M K +++ PN+ITYS L+D   KNG+  EA ELFEEMV +  I PD +TY+ LI+
Sbjct: 246 RLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVTYSSLIN 303

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   ++D A ++ + M + GC  +V +Y TL+NGFCK  ++++  ++F EM    L  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +T+ Y TLI  F +AG VD+A E   +M   G   DI T+NI+LGGLC  G++E+AL + 
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           E +    + L+  +Y  V+   C+ G++E+A  L   +  +G  P   T   ++  LC  
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 463 GM 464
           G+
Sbjct: 484 GL 485



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 175/336 (52%), Gaps = 9/336 (2%)

Query: 181 QVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
           QV LA + L    + L+L  +P+      L+   C+R  +  A  ++ +M   ++ Y P+
Sbjct: 135 QVSLALSIL---GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM--VEIGYKPD 189

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+ +ID LCK  R  +A + F+E + +  I P+ +TY  L++G C   +   A +++
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M      PNV  Y+ L++ F K GK+ EAKE+F+EM    + PD + Y++LIN  C  
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            R+DEA ++   M  +GC AD+V++N ++ G C+  ++E+ + +  ++   G+  N  +Y
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++    Q G+++KA E    M   G  P   T N LL  LC  G  E A +    + +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                +  ++  ++  +C+  K+  A+ L   L +K
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 171/329 (51%), Gaps = 13/329 (3%)

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           +RV + F     I R+  +P++   +  +N L  S++   A   L    +  ++ PN   
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVIT 262

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ L+    K G +  A E+ +EM +  +  P+++TYS+LI+GLC + R  EA ++F+ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSK   L D ++YN LI+GFC+  +V+   K+   M   G   N   Y TL+ GF + G 
Sbjct: 322 VSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A+E F +M  F + PD   Y  L+   C  G +++AL + ++M++R    DIVT+  
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G+C+ GK+EEA  +   L   G+  +  +Y  +++  C KG L +   L   M   G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500

Query: 445 FLPHYAT--------SNELLVRLCKAGMA 465
            + +  T        S EL+ ++   G A
Sbjct: 501 LMKNDCTLSDGDITLSAELIKKMLSCGYA 529



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 1/261 (0%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI+LF +MV K +  P  + +N L+    +  K D    + + M+  G   +++ +
Sbjct: 65  KLNDAIDLFSDMV-KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             ++N FC   ++  A  +  +M     +PD +   +L+N FCR  RV +A+ L+ +M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G K DIV +N I+  LC+  ++ +A    +++   GI  N  +Y  ++N  C       
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  LL  M+ +   P+  T + LL    K G   +A      +V M   P+  +++ L+ 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 493 LICRGRKLLFAFELLDELVIK 513
            +C   ++  A ++ D +V K
Sbjct: 304 GLCLHDRIDEANQMFDLMVSK 324



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 92/194 (47%)

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++ KL +A ++F +M      P  + +  L++   +  + D  + L K+M+  G + D+ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TFNI++   C   ++  AL +L K+   G   ++ +   ++N  C++  +  A+ L+  M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           +  G+ P     N ++  LCK     DA      +   G +P   ++  LV  +C   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 501 LFAFELLDELVIKE 514
             A  LL +++ K+
Sbjct: 242 SDAARLLSDMIKKK 255


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 233/488 (47%), Gaps = 37/488 (7%)

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQK-GFNHNNATYATILDKLARYKKFEAVDA 116
           R IS  A + + +C K+   A E+F  +S  + GF H+  T   +LD  AR K+      
Sbjct: 21  REISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGN 80

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           +L+     T       +  L+  +      E    +  ++       PSLK  +  L+ L
Sbjct: 81  LLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGL 140

Query: 177 IESNQVDLAQNFLKYS---------------------NQHLR-------------LKPNT 202
            +S +V  A +  + +                     N+ ++               P  
Sbjct: 141 CKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTI 200

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N L+   CK G LE A ++L+++  +  + P+++TY++LIDGL K  R  EA +LF+
Sbjct: 201 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVTYTSLIDGLGKEKRSFEAYKLFK 259

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM  +  +L D + Y  LI G  + GK+ +A  + + M + GC P+V   +T+++G CK 
Sbjct: 260 EMALRGLVL-DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G++  A  +F  M+   L P+ + Y+ LI+  C+A ++D ALE+L +MK+  C  D +T+
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 378

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           NI++ GLC+ G +E A    +++   G   +  +Y I+++  C+ G  + A  +   M  
Sbjct: 379 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSS 438

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
               P+  T   L+  LCK      A++    + E G  P+S  ++ LV+ +C+  KL  
Sbjct: 439 SHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEG 498

Query: 503 AFELLDEL 510
              L DE+
Sbjct: 499 GCMLFDEM 506



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 196/420 (46%), Gaps = 40/420 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A++ F T +   G   +  TY  I+D LA+ KK +   A++ ++T   C      +  L+
Sbjct: 149 AMDHFETTTTN-GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALL 207

Query: 138 KHFSNCSLHERVLEMFHKI----------------HPITREKPSLKAI------------ 169
                    E  +++  KI                  + +EK S +A             
Sbjct: 208 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLV 267

Query: 170 --STCLNLLI----ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
             + C   LI    ++ ++  A +  K         P+    + +I   CK G + +A  
Sbjct: 268 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ-GCVPDVVTLSTMIDGLCKAGRIGAAVR 326

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + K M+   ++ PN + YS LI GLCK  +   A+E+  +M  K    PD +TYN+LIDG
Sbjct: 327 IFKSMEARGLA-PNEVVYSALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDG 384

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G V+ A+   + M   GC P+V+ Y  L++GFCK G    A  VFD+M +    P+
Sbjct: 385 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPN 444

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y TLI+  C+  ++ +A    + MKERGC  D   ++ ++ GLC+ GK+E    + +
Sbjct: 445 VVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFD 504

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  ++   R++ +  C+   +++A+ L   +   G +PH    N ++  L K+ 
Sbjct: 505 EMERSGVANSQTRTRLIFHL-CKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSA 562



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 165/313 (52%), Gaps = 3/313 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+LI  +C     E AF V++EM++     P+L T++ ++ GLCK+G+   A++
Sbjct: 92  PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            FE   +    + D  TY  ++D   +  K+  A  +ME +  NGC P +  Y  L+NG 
Sbjct: 152 HFETTTTNGCTI-DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL 210

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G+L+EA ++  ++ +    PD + YT+LI+   +  R  EA +L KEM  RG   D 
Sbjct: 211 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDT 270

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +  ++ GL + GKI +A  + + +   G   +  +   +++  C+ G +  A+ + + 
Sbjct: 271 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKS 330

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF-KPESDSWALLVELICRGR 498
           M  RG  P+    + L+  LCKA    D A+ +   ++  F  P++ ++ +L++ +C+  
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKA-RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389

Query: 499 KLLFAFELLDELV 511
            +  A    DE++
Sbjct: 390 DVEAARAFFDEML 402



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 1/211 (0%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G   +V     L++ F +  + +EA  +          PD   +  LI  +C A   +EA
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 364 LELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
             +++EM+E  G    + T N++L GLC+ GK+  A+   E    +G  ++  +Y  +++
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           +  +  +++ A+ L+  +   G  P  AT N LL  LCK G  E+A   L  +V+ G  P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +  ++  L++ + + ++   A++L  E+ ++
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 264


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 206/395 (52%), Gaps = 27/395 (6%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAV--------- 117
           L+   ++P+ AL+ F     Q GF H   +Y  I+  + R + + +A D V         
Sbjct: 136 LLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRM 195

Query: 118 --------LRQMTYET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSL 166
                   +  M + T   C    G+F  L   F    L E   E F ++    R  P  
Sbjct: 196 DMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNF-RTLPKA 254

Query: 167 KAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           ++ +  L+ L +S    L + F         + P+   +N++I + CK G LE++  +  
Sbjct: 255 RSCNFLLHRLSKSGNGQLVRKFFN-DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFV 313

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVLIDGFC 285
           +M++  +S P+++TY++LIDG  K G   E   LF EM  KD   +PD +TYN LI+ +C
Sbjct: 314 QMREMGLS-PDVVTYNSLIDGYGKVGSLEEVASLFNEM--KDVGCVPDIITYNGLINCYC 370

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           +  K+ RA +    MKNNG  PNV  Y+TL++ FCKEG +Q A ++F +M+   L P+  
Sbjct: 371 KFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEF 430

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YT+LI+  C+AG + EA +LL +M + G K +IVT+  +L GLC+ G++ EA  +   +
Sbjct: 431 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
             DGI  N+  Y  +++   +   +E A+++L+ M
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 168/311 (54%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N LI  +CK   +  AFE   EMK + +  PN++TYSTLID  CK G  + AI+
Sbjct: 357 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK-PNVVTYSTLIDAFCKEGMMQGAIK 415

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF +M  +  +LP+  TY  LID  C+ G +  A K++  M   G   N+  YT L++G 
Sbjct: 416 LFVDM-RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G++ EA+EVF  M    + P+   YT L++ + +A R+++A+++LK+M E   K D+
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 534

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           + +  I+ G C + K+EE   +LE++   GI  N      +++   + G+   A+   + 
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 594

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G      T   L+  LCKAG+ E A      ++ +G +P    +  L++ +C+   
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654

Query: 500 LLFAFELLDEL 510
           +  A +L DE+
Sbjct: 655 IESAKKLFDEM 665



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 213/426 (50%), Gaps = 4/426 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G + +  TY +++D   +    E V ++  +M    C      +  L+  +       
Sbjct: 317 EMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMP 376

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R  E F ++      KP++   ST ++   +   +  A   L    +   L PN   +  
Sbjct: 377 RAFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIK-LFVDMRRTGLLPNEFTYTS 434

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +CK G L  A+++L +M ++ +   N++TY+ L+DGLCK GR  EA E+F  M+ K
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKL-NIVTYTALLDGLCKAGRMIEAEEVFRSML-K 492

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D I P+   Y  L+ G+ +  +++ A KI++ M      P++  Y +++ G C + KL+E
Sbjct: 493 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 552

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
            K + +EMK+  +  + +  TT+I+ + +AG+  +AL   +EM++ G +A IVT+ +++ 
Sbjct: 553 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 612

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G +E A+    ++   G+  N A Y  +++  C+   +E A +L   M CRG  P
Sbjct: 613 GLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTP 672

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                  L+    K G  ++A + +  + E+  + +   +  LV    +  +L  A +  
Sbjct: 673 DITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFF 732

Query: 508 DELVIK 513
           +E++ K
Sbjct: 733 NEMIEK 738



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 162/307 (52%), Gaps = 2/307 (0%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +F++L     + G LE A E    M+  + + P   + + L+  L K+G  +   + F +
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFR-TLPKARSCNFLLHRLSKSGNGQLVRKFFND 279

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+    I P   TYNV+ID  C+ G ++ ++++   M+  G +P+V  Y +L++G+ K G
Sbjct: 280 MIGAG-IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 338

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            L+E   +F+EMK+    PD I Y  LINC+C+  ++  A E   EMK  G K ++VT++
Sbjct: 339 SLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYS 398

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++   C+EG ++ A+ +   +   G+  N+ +Y  +++ +C+ G L +A +LL  ML  
Sbjct: 399 TLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA 458

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G   +  T   LL  LCKAG   +A      +++ G  P    +  LV    +  ++  A
Sbjct: 459 GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDA 518

Query: 504 FELLDEL 510
            ++L ++
Sbjct: 519 MKILKQM 525



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 162/348 (46%), Gaps = 21/348 (6%)

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM---KKSQMSYP--NL 238
           LA  F K++   +  +  T  + I++    +      A + +KE+    +  M +P  N+
Sbjct: 145 LALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNI 204

Query: 239 I---------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                            +  L     + G   EA E F  M    + LP A + N L+  
Sbjct: 205 FDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM-RNFRTLPKARSCNFLLHR 263

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             + G     +K    M   G  P+VF Y  +++  CKEG L+ ++ +F +M+   L PD
Sbjct: 264 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 323

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y +LI+ + + G ++E   L  EMK+ GC  DI+T+N ++   C+  K+  A     
Sbjct: 324 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFS 383

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  +G+  N  +Y  +++  C++G ++ AI+L   M   G LP+  T   L+   CKAG
Sbjct: 384 EMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAG 443

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              +A   L  +++ G K    ++  L++ +C+  +++ A E+   ++
Sbjct: 444 NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 491



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 179/403 (44%), Gaps = 41/403 (10%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSE--QKGFNHNNATYATILDKLARY 108
           VD R+     +     SLI    +     E +  +++  Q G   N  TY  +LD L + 
Sbjct: 418 VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 477

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
            +    + V R M  +    ++ ++  L+  +      E  +++             LK 
Sbjct: 478 GRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI-------------LKQ 524

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           ++ C                         +KP+  ++  +I  HC +  LE    +L+EM
Sbjct: 525 MTEC------------------------NIKPDLILYGSIIWGHCSQRKLEETKLILEEM 560

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K   +S  N +  +T+ID   K G+  +A+  F+EM     +    +TY VLIDG C+ G
Sbjct: 561 KSRGIS-ANPVISTTIIDAYFKAGKSSDALNFFQEM-QDVGVEATIVTYCVLIDGLCKAG 618

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            V+ A      M + G  PNV  YT+L++G CK   ++ AK++FDEM+   + PD   +T
Sbjct: 619 IVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFT 678

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LI+   + G + EAL L+  M E   + D+  +  ++ G  + G++ +A     ++   
Sbjct: 679 ALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 738

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           GI   +     +L    ++G+L++AIEL   M   G +   AT
Sbjct: 739 GILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 218/418 (52%), Gaps = 5/418 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+ + + + F  +   +  +L  + + KK++ V ++ ++M     +     F  ++
Sbjct: 69  AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F  C      L +  K+  +  E P    I + +N     N+V  A + +      + 
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVD-KMVEIG 185

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+   +N +I   CK   +  AF+  KE+++  +  PN++TY+ L++GLC + R+ +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR-PNVVTYTALVNGLCNSSRWSDA 244

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L  +M+ K +I P+ +TY+ L+D F + GKV  AK++ E M     +P++  Y++L+N
Sbjct: 245 ARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C   ++ EA ++FD M +     D + Y TLIN FC+A RV++ ++L +EM +RG  +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VT+N ++ G  + G +++A     ++ + GI  +  +Y I+L   C  GELEKA+ + 
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
             M  R       T   ++  +CK G  E+A      L   G KP+  ++  ++  +C
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 172/302 (56%), Gaps = 3/302 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP + A +  ++ L ++ +V+ A +F K   +   ++PN   +  L+   C       A 
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L +M K +++ PN+ITYS L+D   KNG+  EA ELFEEMV +  I PD +TY+ L++
Sbjct: 246 RLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVTYSSLVN 303

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   ++D A ++ + M + GC  +V +Y TL+NGFCK  ++++  ++F EM    L  
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +T+ Y TLI  F +AG VD+A E   +M   G   DI T+NI+LGGLC  G++E+AL + 
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           E +    + L+  +Y  V+   C+ G++E+A  L   +  +G  P   T   ++  LC  
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 463 GM 464
           G+
Sbjct: 484 GL 485



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 175/336 (52%), Gaps = 9/336 (2%)

Query: 181 QVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
           QV LA + L    + L+L  +P+      L+   C+R  +  A  ++ +M   ++ Y P+
Sbjct: 135 QVSLALSIL---GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM--VEIGYKPD 189

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+ +ID LCK  R  +A + F+E + +  I P+ +TY  L++G C   +   A +++
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M      PNV  Y+ L++ F K GK+ EAKE+F+EM    + PD + Y++L+N  C  
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            R+DEA ++   M  +GC AD+V++N ++ G C+  ++E+ + +  ++   G+  N  +Y
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++    Q G+++KA E    M   G  P   T N LL  LC  G  E A +    + +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                +  ++  ++  +C+  K+  A+ L   L +K
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 171/329 (51%), Gaps = 13/329 (3%)

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           +RV + F     I R+  +P++   +  +N L  S++   A   L    +  ++ PN   
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVIT 262

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ L+    K G +  A E+ +EM +  +  P+++TYS+L++GLC + R  EA ++F+ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLVNGLCLHDRIDEANQMFDLM 321

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSK   L D ++YN LI+GFC+  +V+   K+   M   G   N   Y TL+ GF + G 
Sbjct: 322 VSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A+E F +M  F + PD   Y  L+   C  G +++AL + ++M++R    DIVT+  
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G+C+ GK+EEA  +   L   G+  +  +Y  +++  C KG L +   L   M   G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500

Query: 445 FLPHYAT--------SNELLVRLCKAGMA 465
            + +  T        S EL+ ++   G A
Sbjct: 501 LMKNDCTLSDGDITLSAELIKKMLSCGYA 529



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 1/261 (0%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI+LF +MV K +  P  + +N L+    +  K D    + + M+  G   +++ +
Sbjct: 65  KLNDAIDLFSDMV-KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             ++N FC   ++  A  +  +M     +PD +   +L+N FCR  RV +A+ L+ +M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G K DIV +N I+  LC+  ++ +A    +++   GI  N  +Y  ++N  C       
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  LL  M+ +   P+  T + LL    K G   +A      +V M   P+  +++ LV 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303

Query: 493 LICRGRKLLFAFELLDELVIK 513
            +C   ++  A ++ D +V K
Sbjct: 304 GLCLHDRIDEANQMFDLMVSK 324



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 92/194 (47%)

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++ KL +A ++F +M      P  + +  L++   +  + D  + L K+M+  G + D+ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TFNI++   C   ++  AL +L K+   G   ++ +   ++N  C++  +  A+ L+  M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           +  G+ P     N ++  LCK     DA      +   G +P   ++  LV  +C   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 501 LFAFELLDELVIKE 514
             A  LL +++ K+
Sbjct: 242 SDAARLLSDMIKKK 255


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 170/298 (57%), Gaps = 4/298 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N LI   CK+G L SA E++ EM+      PN+ITY+ LID  CK GR  EA  
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCE-PNVITYTILIDRFCKEGRLEEARN 70

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + +EM  K   L +A+ YN LI   C+  KV  A  +   M + GC P++F + +L+ G 
Sbjct: 71  VLDEMSGKGLAL-NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 129

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  K +EA  ++ +M    +  +TI Y TLI+ F R G + EAL+L+ +M  RGC  D 
Sbjct: 130 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 189

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N ++  LCR G IE+ L + E +   G+  N  S  I++N  C+ G ++ A+E LR 
Sbjct: 190 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 249

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICR 496
           M+ RG  P   T N L+  LCK G A++ A+ LF  +++ G  P++ ++  L+   C+
Sbjct: 250 MIHRGLTPDIVTYNSLINGLCKTGRAQE-ALNLFDKLQVEGICPDAITYNTLISWHCK 306



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 143/241 (59%), Gaps = 2/241 (0%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD  TYN LI G C+ G +  A+++M  M+  GC PNV  YT L++ FCKEG+L+EA+ V
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            DEM    L  + +GY  LI+  C+  +V +AL +  +M  +GCK DI TFN ++ GLC+
Sbjct: 72  LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             K EEALG+ + +  +G+  N  +Y  +++   ++G +++A++L+  ML RG      T
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191

Query: 452 SNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            N L+  LC+AG  E   +ALF  ++  G  P + S  +L+  +CR   +  A E L ++
Sbjct: 192 YNGLIKALCRAGNIE-KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250

Query: 511 V 511
           +
Sbjct: 251 I 251



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 152/302 (50%), Gaps = 35/302 (11%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY----------------------- 235
           +PN   + ILI   CK G LE A  VL EM    ++                        
Sbjct: 46  EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 105

Query: 236 -----------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
                      P++ T+++LI GLCK  +F EA+ L+++M+  + ++ + +TYN LI  F
Sbjct: 106 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYNTLIHAF 164

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
            R G +  A K++  M   GC  +   Y  L+   C+ G +++   +F++M +  L P+ 
Sbjct: 165 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 224

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I    LIN  CR G +  ALE L++M  RG   DIVT+N ++ GLC+ G+ +EAL + +K
Sbjct: 225 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 284

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           L  +GI  +  +Y  ++++ C++G  + A  LL   +  GF+P+  T   L+    K G 
Sbjct: 285 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344

Query: 465 AE 466
            E
Sbjct: 345 QE 346


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 182/364 (50%), Gaps = 70/364 (19%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +N +I   C RG +++A EV++EM++     P+  TY+TLI G CK GR  +A+
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK----------------------- 295
           ++F+EM++K ++ P A+ YN LI G+C  GK+D A +                       
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263

Query: 296 ------------IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK------- 336
                       ++E M+ NG +P+VF Y  L+NG+CKEG  ++A EVF+EM        
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323

Query: 337 ------------------------NFLLK----PDTIGYTTLINCFCRAGRVDEALELLK 368
                                   N  +K    PD + Y  LIN  C  G ++ A E++ 
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMA 383

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM+++    D +T+N ++ G C  G+++EA  +++++   GI  +  SY  +++    KG
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKG 443

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +++ A+ +   M+ +GF P   T N L+  LCK    +DA   +  +V  G  P+  ++ 
Sbjct: 444 DIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYI 503

Query: 489 LLVE 492
            L+E
Sbjct: 504 SLIE 507



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 166/375 (44%), Gaps = 44/375 (11%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++   I+        Q ALE+   + E+ G   +  TYAT++    +  + E   
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            V  +M  +       +  N +     C + +  + + ++   + R    +       NL
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIG-GYCDVGKLDVALQYREDMVQR---GIAMTVATYNL 259

Query: 176 LIESNQVDLAQNFLKYS----NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM--- 228
           L+ +  +D A+    Y+     Q     P+   +NILI  +CK G  + A EV +EM   
Sbjct: 260 LMHALFMD-ARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQK 318

Query: 229 --KKSQMSY-----------------------------PNLITYSTLIDGLCKNGRFREA 257
             + + ++Y                             P+++ Y+ LI+  C  G    A
Sbjct: 319 GVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERA 378

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+  EM  K +I PD +TYN L+ GFC  G++D A+ +++ M   G  P++ +Y TL++
Sbjct: 379 YEIMAEM-EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+  +G +++A  V DEM +    P  + Y  LI   C+  + D+A  L+KEM  +G   
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497

Query: 378 DIVTFNIILGGLCRE 392
           D  T+  ++ GL  E
Sbjct: 498 DDSTYISLIEGLTTE 512


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 234/517 (45%), Gaps = 90/517 (17%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           +  ++ + +   AL + +  S+Q  F  N++ Y  IL KL +   F ++  +L++M    
Sbjct: 58  LDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLD 117

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
           C+   G+ L  +  ++   L+E +L +   +             +  LN+L++ N++ L 
Sbjct: 118 CQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLV 177

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           +N +  +     +KP+   FNILIK  CK   +  A  V++EM    +  P+  T++TL+
Sbjct: 178 EN-VHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGL-VPDEKTFTTLM 235

Query: 246 DGL-----------------------------------CKNGRFREA------------- 257
            G                                    CK GR  EA             
Sbjct: 236 QGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKH 295

Query: 258 ---IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
              IEL+ EM +K    PD  TYN+LID  C  GK+  A  ++  M+ +GC  NV  Y T
Sbjct: 296 TMAIELYNEMKNKG-CQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNT 354

Query: 315 LMNGFCKEGKLQEAKEVFDEMK-----------NFL------------------------ 339
           L++GFCK  K++EA+E+FD+M+           N L                        
Sbjct: 355 LIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEG 414

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           LKPD   Y +++  FCR G + +A ++++ M   GC+ DIVT+  ++GGLC+ G++E A 
Sbjct: 415 LKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVAS 474

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L  +   G+ L   +Y  V+    ++   ++A+ L R M  +G  P   T   +   L
Sbjct: 475 RLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGL 534

Query: 460 CKAGMAEDAAIA-LFGLVEMGFKPESDSWALLVELIC 495
             +G     A+  +  ++E GF PE  S+ +L E +C
Sbjct: 535 SNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 160/279 (57%), Gaps = 4/279 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N+LI   C RG L+ A  +L+EM+ S  +  N+ITY+TLIDG CKN +  EA 
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCAR-NVITYNTLIDGFCKNKKIEEAE 369

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+F++M  +  +  +++TYN LIDG C+  +V  A ++M+ M   G  P+ F Y +++  
Sbjct: 370 EIFDQMEIQG-LSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTY 428

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FC+EG +Q+A ++   M +   +PD + Y TLI   C+AGRV+ A  LL+ ++ +G    
Sbjct: 429 FCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLT 488

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL-NFSCQKGELEKAIELL 437
              +N ++  L +  + +EA+ +  ++   G   +  +Y+IV    S   G + +A++ +
Sbjct: 489 PHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFV 548

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
             M+ +GFLP +++   L   LC   M ED  I L  LV
Sbjct: 549 IEMIEKGFLPEFSSFYMLAEGLCSLSM-EDTLIKLVDLV 586



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 193/435 (44%), Gaps = 89/435 (20%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK--K 230
           L+ L   N    A   L ++++    +PN+ I+  +++   K G+  S  ++L+EMK   
Sbjct: 58  LDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLD 117

Query: 231 SQM----------SYP-----------------------NLITYSTLIDGLCKNGRFREA 257
            Q+          SY                        + + Y+ L++ L    + +  
Sbjct: 118 CQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLV 177

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM- 316
             +   MVSK  I PD  T+N+LI   C+  ++  A  +ME M + G  P+   +TTLM 
Sbjct: 178 ENVHSTMVSKG-IKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQ 236

Query: 317 ----------------------------------NGFCKEGKLQEAK------------- 329
                                             +GFCKEG+++EA              
Sbjct: 237 GFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHT 296

Query: 330 ---EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
              E+++EMKN   +PD   Y  LI+  C  G++ EAL LL+EM+  GC  +++T+N ++
Sbjct: 297 MAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLI 356

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C+  KIEEA  + +++   G+  N  +Y  +++  C+   +++A +L+  M+  G  
Sbjct: 357 DGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLK 416

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T N +L   C+ G  + AA  +  +   G +P+  ++  L+  +C+  ++  A  L
Sbjct: 417 PDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRL 476

Query: 507 LDELVIKESGTIQVP 521
           L  + +K  G +  P
Sbjct: 477 LRSIQLK--GMVLTP 489


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 225/439 (51%), Gaps = 11/439 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +FN +  Q      +  +  IL  L + K +  V ++ ++M Y   K +   F  L+
Sbjct: 54  AVSLFNCLLRQNP-TPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF---LKYSNQ 194
             F    L      +  KI  +  E P    ++T +       Q+  A NF   L     
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYE-PDTITLNTFIKGFCLKGQIHQALNFHDKLVALGF 171

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           HL    +   +  LI   CK G   +A E+L+ +   ++   +++ YST+ID +CK+   
Sbjct: 172 HL----DQVSYGTLINGLCKVGETRAALELLRRVD-GKLVQLDVVMYSTIIDSMCKDKNV 226

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A +L+ EMVS+ +I  + +TY+ LI GFC  GK+  A  +   M +   NP+V+ +  
Sbjct: 227 NDAFDLYSEMVSR-RISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++ FCKEG+++EAK     M    +KPD + Y +L++ +C    V+ A  +L  M  RG
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
             A + ++NI++ G C+   +++A+ + +++ +  I+ N  +Y  +++  C+ G +  A+
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           EL+ LM  RG  P   T + +L  LCK  + + A   L  L + G +P   ++ +L++ +
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465

Query: 495 CRGRKLLFAFELLDELVIK 513
           C+G +L  A  + ++L++K
Sbjct: 466 CKGGRLEDARNIFEDLLVK 484



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 169/310 (54%), Gaps = 2/310 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +  +++ +I   CK   +  AF++  EM   ++S  N++TYS LI G C  G+ ++AI L
Sbjct: 209 DVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRIS-SNIVTYSALISGFCIVGKLKDAIGL 267

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M S++ I PD  T+N+L+D FC+ G+V  AK  +  M   G  P++  Y +LM+G+C
Sbjct: 268 FNKMTSEN-INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC 326

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
              ++  AK + + M +  +      Y  +IN FC+   VD+A++L KEM  +    +++
Sbjct: 327 LVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVI 386

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N ++ GLC+ G+I  AL +++ +   G   +  +Y  +L+  C+   ++KAI LL  +
Sbjct: 387 TYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKL 446

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G  P+  T   L+  LCK G  EDA      L+  G+    +++ ++++  C     
Sbjct: 447 KDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLF 506

Query: 501 LFAFELLDEL 510
             A  LL ++
Sbjct: 507 DEALSLLSKM 516



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 174/325 (53%), Gaps = 21/325 (6%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+  N   ++ LI   C  G L+ A  +  +M    ++ P++ T++ L+D  CK GR +E
Sbjct: 240 RISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENIN-PDVYTFNILVDAFCKEGRVKE 298

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A      M+ K  I PD +TYN L+DG+C   +V+ AK I+  M + G    V +Y  ++
Sbjct: 299 AKNGLA-MMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NGFCK   + +A ++F EM +  + P+ I Y +LI+  C++GR+  ALEL+  M +RG +
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ 417

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            DI+T++ IL  LC+   +++A+ +L KL   GI  N  +Y I+++  C+ G LE A  +
Sbjct: 418 PDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNI 477

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV----- 491
              +L +G+     T   ++   C  G+ ++A   L  + +    P++ ++ +++     
Sbjct: 478 FEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFD 537

Query: 492 ------------ELICRGRKLLFAF 504
                       E+I RG  LL++F
Sbjct: 538 KDENDKAEKLLREMITRG--LLYSF 560



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 145/279 (51%), Gaps = 1/279 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN + ++ LI+  C+ G    A  +  +++ K    PD +T N  I GFC  G++ +A  
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKIL-KMGYEPDTITLNTFIKGFCLKGQIHQALN 161

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
             + +   G + +  +Y TL+NG CK G+ + A E+   +   L++ D + Y+T+I+  C
Sbjct: 162 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC 221

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +   V++A +L  EM  R   ++IVT++ ++ G C  GK+++A+G+  K+  + I  +  
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++ I+++  C++G +++A   L +M+ +G  P   T N L+   C       A   L  +
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
              G      S+ +++   C+ + +  A +L  E+  K+
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ 380



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 143/374 (38%), Gaps = 88/374 (23%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E   A  I NT+S  +G      +Y  +++   + K  +    + ++M       H+ IF
Sbjct: 330 EVNMAKSILNTMS-HRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEM------HHKQIF 382

Query: 134 LNLMKHFS------NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
            N++ + S              LE+   +H    ++P +   S+ L+ L +++ VD A  
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHD-RGQQPDIITYSSILDALCKNHLVDKAIA 441

Query: 188 FL-KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM------------------ 228
            L K  +Q +R  PN   + ILI   CK G LE A  + +++                  
Sbjct: 442 LLIKLKDQGIR--PNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQG 499

Query: 229 ----------------KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
                            K     P+ ITY  +I  L       +A +L  EM+++  +L 
Sbjct: 500 FCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG-LLY 558

Query: 273 DALTYNVLIDGF--------------CRGGK--VDRAKKIME-------FMKNNGCNPNV 309
             L Y      F              C   +   + AK ++E         K+N  + +V
Sbjct: 559 SFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDV 618

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
              + ++   C   K           + ++L  +T  YT +I  FC  G  DE+L LL +
Sbjct: 619 ECPSVIIYSTCDWSK-----------QGYILDVNT--YTVMIQGFCSHGLFDESLALLSK 665

Query: 370 MKERGCKADIVTFN 383
           M+  GC  D VT++
Sbjct: 666 MEVNGCIPDAVTYD 679


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 214/435 (49%), Gaps = 24/435 (5%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-------S 141
           +G   +  T+ T++  L R  +      +L +M+       E  F  LM+ F       +
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEA 234

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHLR--L 198
              +  R+LEM               A    +N+LI    ++   ++ L Y  Q +    
Sbjct: 235 ALRVKARMLEM------------GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 282

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N  +   C+   +  A +V+  M +     P++ TY+ +++ LCKNG+  EA 
Sbjct: 283 EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD-PDVFTYNIVVNCLCKNGQLEEAK 341

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +  +MV +   LPD  T+N LI   C G +++ A  +   +   G +P+V+ +  L+N 
Sbjct: 342 GILNQMVDRG-CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK G    A  +F+EMKN    PD + Y TLI+  C  G++ +AL+LLK+M+  GC   
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            +T+N I+ GLC++ +IEEA  + +++   GI  N  ++  +++  C+  +++ A EL+ 
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G  P+  T N +L   CK G  + AA  L  +   GF+ +  ++  L+  +C+  
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 499 KLLFAFELLDELVIK 513
           +   A ++L  + IK
Sbjct: 581 RTQVALKVLRGMRIK 595



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 194/358 (54%), Gaps = 12/358 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESA 221
           P +   +  +N L ++ Q++ A+  L   NQ +     P+   FN LI   C    LE A
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGIL---NQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++ +++    +S P++ T++ LI+ LCK G    A+ LFEEM       PD +TYN LI
Sbjct: 376 LDLARQVTVKGVS-PDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLI 433

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C  GK+ +A  +++ M++ GC  +   Y T+++G CK+ +++EA+EVFD+M    + 
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            + I + TLI+  C+  ++D+A EL+ +M   G + + +T+N IL   C++G I++A  +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LE +  +G  ++  +Y  ++N  C+ G  + A+++LR M  +G  P     N +L  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL-----FAFELLDELVIKE 514
                DA      + E+G  P++ ++ ++   +CRG   +     F  E++D+  I E
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 163/342 (47%), Gaps = 2/342 (0%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L  L E    D A   L  +       P   ++  +I+     G L+    ++ EM++  
Sbjct: 45  LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREG 104

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIEL-FEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
                 + +S  +D       F +A++L   ++     I  D + YN L++    G K+ 
Sbjct: 105 HQVKLGVVHS-FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
             + +   M   G  P+V  + TLM   C+  +++ A  + +EM +  + PD   +TTL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             F   G ++ AL +   M E GC A  VT N+++ G C+ G++E+ALG +++   DG  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            ++ +Y   +N  CQ   +  A++++ +M+  G  P   T N ++  LCK G  E+A   
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L  +V+ G  P+  ++  L+  +C G +L  A +L  ++ +K
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   +  TY TI+D L +  + E  + V  QM        +GI  N +         
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL------QGISRNAI--------- 497

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCI 204
                                  +T ++ L +  ++D A   +   NQ +   L+PN   
Sbjct: 498 ---------------------TFNTLIDGLCKDKKIDDAFELI---NQMISEGLQPNNIT 533

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++ H+CK+G ++ A ++L+ M  +     +++TY TLI+GLCK GR + A+++   M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEV-DVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  + P    YN ++    R   +  A  +   M   G  P+   Y  +  G C+ G 
Sbjct: 593 RIKG-MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 325 LQEAKEVFDEM 335
               KE FD M
Sbjct: 652 --PIKEAFDFM 660


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 229/447 (51%), Gaps = 22/447 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDK--LARYKKFEAVDAVLRQM-------------- 121
           AL+  N V +Q G    + T+   +    L R + +E   ++L+ +              
Sbjct: 28  ALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGAL 87

Query: 122 --TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
             TY  CK +  +F  L++ +    +    LE F ++  I    PS+   +  L  L++ 
Sbjct: 88  MNTYPLCKSNPSVFDLLIRVYLREGMVGDALETF-RLMGIRGFNPSVYTCNMLLGKLVKE 146

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            +V     F K      R+ P+   FNILI   C  G L+ A  +LK+M++S    P+++
Sbjct: 147 RKVGAVWLFFKEMLAR-RVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGY-VPSVV 204

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY+T+++  CK GR++ A+EL ++M SK  I  DA TYN+L+D  C+  +  +   +++ 
Sbjct: 205 TYNTVLNWYCKKGRYKAALELIDQMGSKG-IEADACTYNMLVDDLCKNNRSAKGYLLLKK 263

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+    +PN   Y +++NGF KEGK+  A  +F EM    L P+ + Y  LI+  C  G 
Sbjct: 264 MRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGN 323

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            ++AL +L+ M+  G K + V+++ +L GLCR  K E +  +LE++  +G+ +   +Y  
Sbjct: 324 FEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTA 383

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G L ++++LL  ML  G +P   T + L+   C+ G  ++    +  + + G
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443

Query: 480 FKPESDSWALLVELICRGRKLLFAFEL 506
             P S  +  L+   C+   ++ AF++
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKV 470



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 221/439 (50%), Gaps = 15/439 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV-----DAVLRQMTYETCKFHEGI 132
           ALE F  +   +GFN +  T   +L KL + +K  AV     + + R++  +   F+  I
Sbjct: 117 ALETFRLMG-IRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFN--I 173

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
            +N++           +L+   +   +    PS+   +T LN   +  +   A   +   
Sbjct: 174 LINVLCVEGKLKKAGYLLKKMEESGYV----PSVVTYNTVLNWYCKKGRYKAALELIDQM 229

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                ++ + C +N+L+   CK       + +LK+M+K  +S PN ITY+++I+G  K G
Sbjct: 230 GSK-GIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMIS-PNEITYNSIINGFVKEG 287

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +   A  +F+EM S   +LP+ +TYN LIDG C  G  ++A  I+E M+  G  PN  +Y
Sbjct: 288 KIGAATRIFQEM-SMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSY 346

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           + L+NG C+  K + +K + + M+   +    I YT +I+  CR G ++E+++LL +M +
Sbjct: 347 SALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLK 406

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G   D+VTF++++ G CR GKI+    ++ K++  G+  N   Y  ++   C+ G++ +
Sbjct: 407 DGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVE 466

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A ++   M   G+  +    N L+  LCK G    A      + ++G  P S ++  ++ 
Sbjct: 467 AFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIIN 526

Query: 493 LICRGRKLLFAFELLDELV 511
                   L AF + DE++
Sbjct: 527 GYGNSGNGLKAFSMFDEMI 545



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 206/426 (48%), Gaps = 6/426 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+ G+  +  TY T+L+   +  +++A   ++ QM  +  +     +  L+      +  
Sbjct: 195 EESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRS 254

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            +   +  K+       P+    ++ +N  ++  ++  A    +  +  L L PN   +N
Sbjct: 255 AKGYLLLKKMRK-RMISPNEITYNSIINGFVKEGKIGAATRIFQEMSM-LNLLPNCVTYN 312

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  HC  G  E A  +L EM ++    PN ++YS L++GLC++ +F  +  + E M  
Sbjct: 313 ALIDGHCHDGNFEQALTIL-EMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRM 371

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              I+   + Y  +IDG CR G ++ + K+++ M  +G  P+V  ++ L+NGFC+ GK++
Sbjct: 372 NGMIV-GCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIK 430

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
             KE+  +M    L P++I YTTLI  +C+ G V EA ++   M   G  A+    N+++
Sbjct: 431 NVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLV 490

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC++GK+  A      +   G   N  ++  ++N     G   KA  +   M+  G  
Sbjct: 491 SSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHH 550

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW-ALLVELICRGRKLLFAFE 505
           P + T   LL  LC+AG  ++A   L  L  +    ++ ++  +LVE    G  L  A  
Sbjct: 551 PSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGM-LTDAVA 609

Query: 506 LLDELV 511
           L DE+V
Sbjct: 610 LFDEMV 615



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 150/311 (48%), Gaps = 2/311 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T  +N ++    K G L  A  +  EM +  +  P+  TY+ +  GL + G+   A+  
Sbjct: 587 DTVTYNTILVETFKSGMLTDAVALFDEMVQRNV-LPDSYTYAIIFAGLIRRGKMVAALHF 645

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           +  ++ K  + P+ + Y   +DG  R G+   A    E M+ NG   ++     ++NG+ 
Sbjct: 646 YGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYS 705

Query: 321 KEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           + GK+ +A ++F  M     + P    Y  L++ + +   + +   L   M   G   D 
Sbjct: 706 RMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDK 765

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T + ++ G C+   ++  L +L+K+  DG+ +++ ++ +++   C+  E+ KA +L+ +
Sbjct: 766 LTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNI 825

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M      P   T + ++  L +    +++ + L  ++E G  P+   +  LV  +CR   
Sbjct: 826 MNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGH 885

Query: 500 LLFAFELLDEL 510
           +  AF+L DE+
Sbjct: 886 IHGAFKLKDEM 896



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 125/236 (52%), Gaps = 8/236 (3%)

Query: 201  NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
            + C FN+LI  +C+   +  AF+++  M    + +P++ T+ ++I  L +    +E+  L
Sbjct: 799  DQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDI-FPDMTTHDSIISVLSRVSTVQESHLL 857

Query: 261  FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
              EM+ +  I PD   Y  L++  CR G +  A K+ + M+  G +      + L+ G  
Sbjct: 858  LHEMLERGCI-PDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLA 916

Query: 321  KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            K GK++EAK V D M    L P    +TTL++ FCR   + EAL+L   M     K D++
Sbjct: 917  KCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVI 976

Query: 381  TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL------NFSCQKGEL 430
             +N+++ GLC +G +  AL + +++   G++ N  +Y I++      + S  KGE+
Sbjct: 977  AYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEV 1032



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/436 (20%), Positives = 183/436 (41%), Gaps = 6/436 (1%)

Query: 78  ALEIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
            L+ F+   E  + G + ++ TY  +L  L R  KF+    +L ++ Y         +  
Sbjct: 534 GLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNT 593

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREK-PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           ++       +    + +F ++  + R   P     +     LI   ++  A +F      
Sbjct: 594 ILVETFKSGMLTDAVALFDEM--VQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLG 651

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + P   ++   +    + G  ++A    ++M+K+ +   +LI  + +++G  + G+ 
Sbjct: 652 KGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLC-ADLIATNVILNGYSRMGKM 710

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A ++F  M S   I P   TYN+L+ G+ +   + +   +   M   G  P+     +
Sbjct: 711 AKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHS 770

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+ GFCK   L    ++  +M    +  D   +  LI  +C    V +A +L+  M    
Sbjct: 771 LILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFD 830

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+ T + I+  L R   ++E+  +L ++   G   ++  Y  ++N  C+ G +  A 
Sbjct: 831 IFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAF 890

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +L   M   G        + L+  L K G  E+A + L  ++     P   ++  L+ + 
Sbjct: 891 KLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950

Query: 495 CRGRKLLFAFELLDEL 510
           CR   L+ A +L D +
Sbjct: 951 CRNESLVEALKLKDTM 966



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 35/270 (12%)

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
            +++LI  + R G V  A +    M   G NP+V+    L+    KE K+      F EM
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEM 159

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
               + PD   +  LIN  C  G++ +A  LLK+M+E G    +VT+N +L   C++G+ 
Sbjct: 160 LARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRY 219

Query: 396 EEALGMLEKLWYDGI-----------------------YL------------NKASYRIV 420
           + AL +++++   GI                       YL            N+ +Y  +
Sbjct: 220 KAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSI 279

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +N   ++G++  A  + + M     LP+  T N L+   C  G  E A   L  +   G 
Sbjct: 280 INGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDEL 510
           KP   S++ L+  +CR  K   +  +L+ +
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERM 369



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 1/212 (0%)

Query: 240  TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            T++ LI   C+     +A +L   M   D I PD  T++ +I    R   V  +  ++  
Sbjct: 802  TFNMLIMKYCETDEVGKAFDLVNIMNLFD-IFPDMTTHDSIISVLSRVSTVQESHLLLHE 860

Query: 300  MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
            M   GC P+   Y  L+N  C+ G +  A ++ DEM+   +    +  + L+    + G+
Sbjct: 861  MLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGK 920

Query: 360  VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            V+EA  +L  M  +     I TF  ++   CR   + EAL + + + +  + L+  +Y +
Sbjct: 921  VEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNV 980

Query: 420  VLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            +++  C  G++  A++L + +  RG  P+  T
Sbjct: 981  LISGLCADGDVASALKLYKEIKQRGLWPNMTT 1012



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 164  PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
            P++   +T +++   +  +  A   LK +     +K +   +N+LI   C  G + SA +
Sbjct: 938  PTIATFTTLMHMFCRNESLVEALK-LKDTMDFCDVKLDVIAYNVLISGLCADGDVASALK 996

Query: 224  VLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            + KE+K+  + +PN+ TY  LID +  N
Sbjct: 997  LYKEIKQRGL-WPNMTTYCILIDAIFTN 1023


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 214/435 (49%), Gaps = 24/435 (5%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-------S 141
           +G   +  T+ T++  L R  +      +L +M+       E  F  LM+ F       +
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEA 234

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHLR--L 198
              +  R+LEM               A    +N+LI    ++   ++ L Y  Q +    
Sbjct: 235 ALRVKARMLEM------------GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 282

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N  +   C+   +  A +V+  M +     P++ TY+ +++ LCKNG+  EA 
Sbjct: 283 EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD-PDVFTYNIVVNCLCKNGQLEEAK 341

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +  +MV +   LPD  T+N LI   C G +++ A  +   +   G +P+V+ +  L+N 
Sbjct: 342 GILNQMVDRG-CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK G    A  +F+EMKN    PD + Y TLI+  C  G++ +AL+LLK+M+  GC   
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            +T+N I+ GLC++ +IEEA  + +++   GI  N  ++  +++  C+  +++ A EL+ 
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G  P+  T N +L   CK G  + AA  L  +   GF+ +  ++  L+  +C+  
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 499 KLLFAFELLDELVIK 513
           +   A ++L  + IK
Sbjct: 581 RTQVALKVLRGMRIK 595



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 194/358 (54%), Gaps = 12/358 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESA 221
           P +   +  +N L ++ Q++ A+  L   NQ +     P+   FN LI   C    LE A
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGIL---NQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++ +++    +S P++ T++ LI+ LCK G    A+ LFEEM       PD +TYN LI
Sbjct: 376 LDLARQVTVKGVS-PDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLI 433

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C  GK+ +A  +++ M++ GC  +   Y T+++G CK+ +++EA+EVFD+M    + 
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            + I + TLI+  C+  ++D+A EL+ +M   G + + +T+N IL   C++G I++A  +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LE +  +G  ++  +Y  ++N  C+ G  + A+++LR M  +G  P     N +L  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL-----FAFELLDELVIKE 514
                DA      + E+G  P++ ++ ++   +CRG   +     F  E++D+  I E
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 163/342 (47%), Gaps = 2/342 (0%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L  L E    D A   L  +       P   ++  +I+     G L+    ++ EM++  
Sbjct: 45  LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREG 104

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIEL-FEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
                 + +S  +D       F +A++L   ++     I  D + YN L++    G K+ 
Sbjct: 105 HQVKLGVVHS-FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
             + +   M   G  P+V  + TLM   C+  +++ A  + +EM +  + PD   +TTL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             F   G ++ AL +   M E GC A  VT N+++ G C+ G++E+ALG +++   DG  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            ++ +Y   +N  CQ   +  A++++ +M+  G  P   T N ++  LCK G  E+A   
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L  +V+ G  P+  ++  L+  +C G +L  A +L  ++ +K
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   +  TY TI+D L +  + E  + V  QM        +GI  N +         
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL------QGISRNAI--------- 497

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCI 204
                                  +T ++ L +  ++D A   +   NQ +   L+PN   
Sbjct: 498 ---------------------TFNTLIDGLCKDKKIDDAFELI---NQMISEGLQPNNIT 533

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++ H+CK+G ++ A ++L+ M  +     +++TY TLI+GLCK GR + A+++   M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEV-DVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  + P    YN ++    R   +  A  +   M   G  P+   Y  +  G C+ G 
Sbjct: 593 RIKG-MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 325 LQEAKEVFDEM 335
               KE FD M
Sbjct: 652 --PIKEAFDFM 660


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 234/482 (48%), Gaps = 42/482 (8%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++I+C+K+P  ALE+FN++ ++ GF H  +TY +I++KL  Y KFEA++ VL  M     
Sbjct: 12  TVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVG 71

Query: 127 KFH-EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
               EG+++  MK++      +  + +F ++     E P++ + +  +++L++S   D A
Sbjct: 72  NHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCE-PTVFSYNAIMSILVDSGYFDQA 130

Query: 186 QN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
              +++  ++ +   P+   F I +K  C+     +A  +L  M  SQ    N++ Y T+
Sbjct: 131 HKVYMRMRDRGI--TPDVYSFTIRMKSFCRTSRPHAALRLLNNMS-SQGCEMNVVAYCTV 187

Query: 245 IDG-----------------------------------LCKNGRFREAIELFEEMVSKDQ 269
           + G                                   LCK G  +E  +L ++++ K  
Sbjct: 188 VGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVI-KRG 246

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           +LP+  TYN  I G C+ G++D A +++  + + G  P+V  Y  L+ G CK  K QEA+
Sbjct: 247 VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAE 306

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
               ++ N  L+PD+  Y TLI  +C+ G V  A  +L      G   D  T+  ++ GL
Sbjct: 307 VYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGL 366

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C EG+   AL +  +    GI  N   Y  ++     +G + +A +L   M  +G +P  
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEV 426

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T N L+  LCK G   DA   +  ++  G+ P+  ++ +L+       K+  A E+LD 
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486

Query: 510 LV 511
           ++
Sbjct: 487 MM 488



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 219/423 (51%), Gaps = 4/423 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            +G   +  ++   +    R  +  A   +L  M+ + C+ +   +  ++  F   +  +
Sbjct: 139 DRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKD 198

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              E+F K+   +     L   +  L++L +   V   +  L    +   L PN   +N 
Sbjct: 199 EGYELFGKMLA-SGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVL-PNLFTYNF 256

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            I+  C++G L++A  ++  +   Q   P+++TY+ LI GLCKN +F+EA E++   +  
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLI-DQGPKPDVVTYNYLIYGLCKNSKFQEA-EVYLGKLVN 314

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + PD+ TYN LI G+C+GG V  A++I+     NG  P+ F Y +L++G C EG+   
Sbjct: 315 EGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNR 374

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F+E     +KP+ I Y TLI      G + EA +L  EM E+G   ++ TFNI++ 
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVN 434

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G + +A G+++ +   G + +  ++ I+++    + ++E A+E+L +M+  G  P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDP 494

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N LL  LCK    ED       +VE G  P   ++ +L+E +CR  KL  A  LL
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLL 554

Query: 508 DEL 510
           +E+
Sbjct: 555 EEM 557



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 148/288 (51%), Gaps = 3/288 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    FNIL+   CK G +  A  ++K M  S+  +P++ T++ LI G     +   A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMI-SKGYFPDIFTFNILIHGYSTQLKMENA 480

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +E+ + M+  + + PD  TYN L++G C+  K +   +  + M   GC PN+F +  L+ 
Sbjct: 481 LEILDVMMD-NGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLE 539

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE-RGCK 376
             C+  KL +A  + +EMKN  + PD + + TLI+ FC+ G +D A  L ++M+E     
Sbjct: 540 SLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVS 599

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
               T+NII+     +  +  A  + +++    +  +  +YR++++  C+ G ++   + 
Sbjct: 600 CSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKF 659

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           L  M+  GF+P   T   ++  LC      +AA  +  +V+ G  PE+
Sbjct: 660 LLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 176/374 (47%), Gaps = 18/374 (4%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLL--------IESNQVDLAQNFLKYSNQHLRLK 199
           + LEMF+ +      K +L    + +  L        +E   VD+ QN     N  L   
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNV---GNHMLE-- 76

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
               ++   +K++ ++G ++ A  V + M       P + +Y+ ++  L  +G F +A +
Sbjct: 77  ---GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCE-PTVFSYNAIMSILVDSGYFDQAHK 132

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           ++  M  +  I PD  ++ + +  FCR  +   A +++  M + GC  NV  Y T++ GF
Sbjct: 133 VYMRMRDRG-ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            +E    E  E+F +M    +      +  L++  C+ G V E  +LL ++ +RG   ++
Sbjct: 192 YEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNL 251

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N  + GLC++G+++ A+ M+ +L   G   +  +Y  ++   C+  + ++A   L  
Sbjct: 252 FTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGK 311

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ++  G  P   T N L+   CK GM + A   L   V  GF P+  ++  L++ +C   +
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371

Query: 500 LLFAFELLDELVIK 513
              A  L +E + K
Sbjct: 372 TNRALALFNEALGK 385



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FNIL++  C+   L+ A  +L+EMK   ++ P+ +T+ TLIDG CKNG    A  
Sbjct: 529 PNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVN-PDAVTFGTLIDGFCKNGDLDGAYT 587

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF +M     +     TYN++I  F     V  A+K+ + M +    P+ + Y  +++GF
Sbjct: 588 LFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G +    +   EM      P       +INC C   RV EA  ++  M ++G   + 
Sbjct: 648 CKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707

Query: 380 V 380
           V
Sbjct: 708 V 708



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 6/205 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            +E + T+ E KG   N  T+  +L+ L RY K +    +L +M  ++       F  L+
Sbjct: 515 VMETYKTMVE-KGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLI 573

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F      +    +F K+  +     S    +  ++   E   V +A+   +       
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC- 632

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   + +++   CK G ++  ++ L EM ++    P+L T   +I+ LC   R  EA
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGF-IPSLTTLGRVINCLCVEDRVYEA 691

Query: 258 IELFEEMVSKDQILPDALTYNVLID 282
             +   MV K  ++P+A+  N + D
Sbjct: 692 AGIIHRMVQKG-LVPEAV--NTIFD 713


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 212/435 (48%), Gaps = 42/435 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  N  TY T++  L +     A   +LR M  + C+          
Sbjct: 163 ALHLFDKMVGE-GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCE---------- 211

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     P++   +T ++ L +  QV+ A N   +S    +
Sbjct: 212 --------------------------PNVITYNTIIDCLFKDRQVNEALNI--FSEMIAK 243

Query: 198 -LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + PN   +N +I   CK    +    ++ EM  S++  PN++ ++TL+D LCK G    
Sbjct: 244 GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKI-MPNVVIFTTLVDALCKEGMVTI 302

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++ + M+ +  + PD +TY  L+DG C   ++D A K+ + M   GC PNV +Y+TL+
Sbjct: 303 AHDVVDVMIQRG-VEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLI 361

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK  ++ +A  +F+EM    L P+ + Y TLI+  C  GR+ +A+ L  EM   G  
Sbjct: 362 NGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQI 421

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+VT+ I+L  LC+   +++A+ ML+ +    +  +  SY IV++  C+ GELE A +L
Sbjct: 422 PDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDL 481

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +  +G  P   T   ++  LC  G+  +A      +   G  P+  ++ L+     R
Sbjct: 482 FSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLR 541

Query: 497 GRKLLFAFELLDELV 511
             + L A +LL E++
Sbjct: 542 NNETLSAIQLLQEML 556



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 218/477 (45%), Gaps = 56/477 (11%)

Query: 82  FNTVSEQ-KGFNH--------NNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFH 129
           FNT+ E    FN         +   +A IL  +A  K +  V ++ +QM      +  + 
Sbjct: 52  FNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYT 111

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL-NLLIESNQVDLAQNF 188
             I +N   H +       VL    K+      +P     +T +  L +E    +    F
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKL----GHQPDTATFTTLIRGLCVEGKIGEALHLF 167

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
            K   +    +PN   +  LI   CK G   +A  +L+ M +     PN+ITY+T+ID L
Sbjct: 168 DKMVGE--GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCE-PNVITYNTIIDCL 224

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
            K+ +  EA+ +F EM++K  I P+  TYN +I G C+  +      +M  M ++   PN
Sbjct: 225 FKDRQVNEALNIFSEMIAKG-ISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPN 283

Query: 309 VFNYTTLMNGFCKEG-----------------------------------KLQEAKEVFD 333
           V  +TTL++  CKEG                                   ++ EA +VFD
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M      P+ I Y+TLIN +C+  R+D+A+ L +EM +R    +IVT+N ++ GLC  G
Sbjct: 344 TMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVG 403

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++ +A+ +  ++   G   +  +YRI+L++ C+   L++A+ +L+ +      P   + N
Sbjct: 404 RLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYN 463

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            ++  +C+ G  E A      L   G  P+  ++ +++  +C    L  A +L  E+
Sbjct: 464 IVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREM 520



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 146/321 (45%), Gaps = 4/321 (1%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGR 253
           H++  P+   F  ++          +   + K+M    +  P ++ T + +I+  C   R
Sbjct: 67  HMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDS--LGIPSDVYTLAIVINSFCHLNR 124

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
                 +  ++       PD  T+  LI G C  GK+  A  + + M   G  PN   Y 
Sbjct: 125 VDFGFSVLAKIFKLGH-QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYG 183

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL++G CK G  + A  +   M     +P+ I Y T+I+C  +  +V+EAL +  EM  +
Sbjct: 184 TLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAK 243

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   ++ T+N I+ GLC+  + +    ++ ++    I  N   +  +++  C++G +  A
Sbjct: 244 GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIA 303

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            +++ +M+ RG  P   T   L+   C     ++A      +V  G  P   S++ L+  
Sbjct: 304 HDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLING 363

Query: 494 ICRGRKLLFAFELLDELVIKE 514
            C+ +++  A  L +E+  +E
Sbjct: 364 YCKIQRIDKAMYLFEEMCQRE 384


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 220/439 (50%), Gaps = 14/439 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI N +S   GF  +  +Y T+L  L   ++++ V  +  +M  + C  +E  F  L+
Sbjct: 230 AKEILNRLSSY-GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 288

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           + F    + ER +++  ++  H  T   P+    +  +N + +  +VD A +FL     +
Sbjct: 289 RFFCRGGMVERAIQVLQQMSQHGCT---PNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+T  +  +++  C+ G  E A E+L EM +     PN +T++T I  LC+ G   
Sbjct: 346 -GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCP-PNEVTFNTFICILCQKGLIE 403

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI+L E M      +   +TYN L+ GFC  G+VD A   +E   N  C PN   YTTL
Sbjct: 404 QAIKLIELMPEYGCSV-GIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYTTL 459

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   +L  A E+   M       + + +  L++ FC+ G V+EA+EL+ +M E GC
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 519

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +++TFN +L G+ ++   EEAL +L  L   G+ L+  +Y  V++   ++   E+AI+
Sbjct: 520 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQ 579

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELI 494
           +L  +   G  P     N++L  LCK     D AI  F  +V  G  P   ++ +L+E +
Sbjct: 580 MLHAVQDMGMRPKVGMYNKILFALCKR-CETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638

Query: 495 CRGRKLLFAFELLDELVIK 513
                L  A  +L EL  K
Sbjct: 639 AHEGLLKEARYVLSELYAK 657



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 194/352 (55%), Gaps = 12/352 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLE 219
           +PS+   +  L  + +S+    A N L      +R K   PN   +N++I   C+ G ++
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVL----DEMRAKGCTPNIVTYNVIINGMCREGRVD 228

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A E+L  +       P++++Y+T++ GLC   R+ +   LF EMV K + +P+ +T+++
Sbjct: 229 DAKEILNRLSSYGFQ-PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-KCVPNEVTFDM 286

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L+  FCRGG V+RA ++++ M  +GC PN      ++N  CK+G++ +A +  + M  + 
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             PDTI YTT++   CRAGR + A ELL EM  + C  + VTFN  +  LC++G IE+A+
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            ++E +   G  +   +Y  +++  C +G ++ A+EL   + C    P+  T   LL  L
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 463

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           C A   + AA  L G+++      + ++ +LV   C+   +  A EL+++++
Sbjct: 464 CHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 515



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 172/315 (54%), Gaps = 2/315 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+   +  +I+  C RG +  A  +L +M + +   P+++TY+ L++ +CK+  F 
Sbjct: 135 MPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ-RGCQPSVVTYTVLLEAVCKSSGFG 193

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA+ + +EM +K    P+ +TYNV+I+G CR G+VD AK+I+  + + G  P++ +YTT+
Sbjct: 194 EAMNVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTV 252

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   +  + K +F EM +    P+ + +  L+  FCR G V+ A+++L++M + GC
Sbjct: 253 LKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGC 312

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +    NI++  +C++G++++A   L  +   G   +  SY  VL   C+ G  E A E
Sbjct: 313 TPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKE 372

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M+ +   P+  T N  +  LC+ G+ E A   +  + E G      ++  LV   C
Sbjct: 373 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 432

Query: 496 RGRKLLFAFELLDEL 510
              ++  A EL + L
Sbjct: 433 VQGRVDSALELFNNL 447



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 161/314 (51%), Gaps = 5/314 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LI++ C+RG    A  VL+  + S     ++  Y+TL+ G C+ GR   A  
Sbjct: 72  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPV-DVFAYNTLVAGYCRYGRLDAARR 130

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M     + PDA TY  +I G C  G+V  A  +++ M   GC P+V  YT L+   
Sbjct: 131 LIASM----PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAV 186

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK     EA  V DEM+     P+ + Y  +IN  CR GRVD+A E+L  +   G + DI
Sbjct: 187 CKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDI 246

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++  +L GLC   + ++   +  ++       N+ ++ +++ F C+ G +E+AI++L+ 
Sbjct: 247 VSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQ 306

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G  P+    N ++  +CK G  +DA   L  +   G  P++ S+  ++  +CR  +
Sbjct: 307 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 366

Query: 500 LLFAFELLDELVIK 513
              A ELL E+V K
Sbjct: 367 WEHAKELLPEMVRK 380



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 9/222 (4%)

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A +++E   + G  P+V+  T L+   C+ G+  +A  V    +      D   Y TL+ 
Sbjct: 58  AARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVA 117

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            +CR GR+D A  L+  M       D  T+  I+ GLC  G++ +AL +L+ +   G   
Sbjct: 118 GYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQP 174

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y ++L   C+     +A+ +L  M  +G  P+  T N ++  +C+ G  +DA   L
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 234

Query: 473 FGLVEMGFKPESDSWALLVELICRGR-----KLLFAFELLDE 509
             L   GF+P+  S+  +++ +C  R     K+LFA E++D+
Sbjct: 235 NRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFA-EMVDK 275


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 193/399 (48%), Gaps = 43/399 (10%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           RV+E+  K       +P + A +  +N   + N++D A   L          P+T  +NI
Sbjct: 141 RVMEILEKFG-----QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNI 194

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   C RG L+ A +VL ++  S    P +ITY+ LI+     G   EA++L +EM+S+
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSR 253

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRA---------------------------------- 293
             + PD  TYN +I G C+ G VDRA                                  
Sbjct: 254 G-LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEE 312

Query: 294 -KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            +K+M  M +  C+PNV  Y+ L+   C++GK++EA  +   MK   L PD   Y  LI 
Sbjct: 313 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 372

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FCR GR+D A+E L+ M   GC  DIV +N +L  LC+ GK ++AL +  KL   G   
Sbjct: 373 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 432

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N +SY  + +     G+  +A+ ++  M+  G  P   T N ++  LC+ GM + A   L
Sbjct: 433 NSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELL 492

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             +    F P   ++ +++   C+  ++  A ++LD +V
Sbjct: 493 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMV 531



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 176/316 (55%), Gaps = 6/316 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLK--EMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           LKP+   +N +I+  CK G ++ AFE+++  E+K  +   P++I+Y+ L+  L   G++ 
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCE---PDVISYNILLRALLNQGKWE 311

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E  +L  +M S ++  P+ +TY++LI   CR GK++ A  +++ MK  G  P+ ++Y  L
Sbjct: 312 EGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 370

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +  FC+EG+L  A E  + M +    PD + Y T++   C+ G+ D+ALE+  ++ E GC
Sbjct: 371 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 430

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  ++N +   L   G    AL M+ ++  +GI  ++ +Y  +++  C++G ++KA E
Sbjct: 431 SPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFE 490

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M    F P   T N +L+  CKA   EDA   L  +V  G +P   ++ +L+E I 
Sbjct: 491 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIG 550

Query: 496 RGRKLLFAFELLDELV 511
                  A EL ++LV
Sbjct: 551 FAGYRAEAMELANDLV 566



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 175/348 (50%), Gaps = 40/348 (11%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LIK       +  A  V++ ++K     P++  Y+ LI+G CK  R  +A  
Sbjct: 118 PDVILCTKLIKGFFTLRNVPKAVRVMEILEK--FGQPDVFAYNALINGFCKMNRIDDATR 175

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + M SKD   PD +TYN++I   C  GK+D A K+++ + ++ C P V  YT L+   
Sbjct: 176 VLDRMRSKD-FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEAT 234

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             EG + EA ++ DEM +  LKPD   Y T+I   C+ G VD A E+++ ++ +GC+ D+
Sbjct: 235 MLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDV 294

Query: 380 VTFNIILGG-----------------------------------LCREGKIEEALGMLEK 404
           +++NI+L                                     LCR+GKIEEA+ +L+ 
Sbjct: 295 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 354

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+  +  SY  ++   C++G L+ AIE L  M+  G LP     N +L  LCK G 
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 414

Query: 465 AEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           A D A+ +FG L E+G  P S S+  +   +      + A  ++ E+V
Sbjct: 415 A-DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMV 461



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 9/377 (2%)

Query: 138 KHFSNCS---LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           KH+SN S    H R L  F   +P      S  + S   NL   +    +     +  +Q
Sbjct: 21  KHYSNSSHGLSHNRSLLTFSNSNPNHDNGKSFSS-SGARNLQATTTDAAIPTERRQQHSQ 79

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            L  + +T +  I     C+ G    +  +L+ M +   + P++I  + LI G       
Sbjct: 80  SLGFR-DTQMLKIF-HRSCRSGNYIESLHLLETMVRKGYN-PDVILCTKLIKGFFTLRNV 136

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A+ + E +    Q  PD   YN LI+GFC+  ++D A ++++ M++   +P+   Y  
Sbjct: 137 PKAVRVMEILEKFGQ--PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 194

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++   C  GKL  A +V D++ +   +P  I YT LI      G VDEAL+LL EM  RG
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG 254

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            K D+ T+N I+ G+C+EG ++ A  M+  L   G   +  SY I+L     +G+ E+  
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGE 314

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +L+  M      P+  T + L+  LC+ G  E+A   L  + E G  P++ S+  L+   
Sbjct: 315 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 374

Query: 495 CRGRKLLFAFELLDELV 511
           CR  +L  A E L+ ++
Sbjct: 375 CREGRLDVAIEFLETMI 391



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 95/194 (48%), Gaps = 1/194 (0%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G   E+  + + M      PD I  T LI  F     V +A+ ++ E+ E+  + D+
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N ++ G C+  +I++A  +L+++       +  +Y I++   C +G+L+ A+++L  
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +L     P   T   L+      G  ++A   L  ++  G KP+  ++  ++  +C+   
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 500 LLFAFELLDELVIK 513
           +  AFE++  L +K
Sbjct: 275 VDRAFEMIRNLELK 288


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 214/435 (49%), Gaps = 24/435 (5%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-------S 141
           +G   +  T+ T++  L R  +      +L +M+       E  F  LM+ F       +
Sbjct: 83  RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEA 142

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHLR--L 198
              +  R+LEM               A    +N+LI    ++   ++ L Y  Q +    
Sbjct: 143 ALRVKARMLEM------------GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 190

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N  +   C+   +  A +V+  M +     P++ TY+ +++ LCKNG+  EA 
Sbjct: 191 EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD-PDVFTYNIVVNCLCKNGQLEEAK 249

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +  +MV +   LPD  T+N LI   C G +++ A  +   +   G +P+V+ +  L+N 
Sbjct: 250 GILNQMVDRG-CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK G    A  +F+EMKN    PD + Y TLI+  C  G++ +AL+LLK+M+  GC   
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            +T+N I+ GLC++ +IEEA  + +++   GI  N  ++  +++  C+  +++ A EL+ 
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 428

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G  P+  T N +L   CK G  + AA  L  +   GF+ +  ++  L+  +C+  
Sbjct: 429 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488

Query: 499 KLLFAFELLDELVIK 513
           +   A ++L  + IK
Sbjct: 489 RTQVALKVLRGMRIK 503



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 194/358 (54%), Gaps = 12/358 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESA 221
           P +   +  +N L ++ Q++ A+  L   NQ +     P+   FN LI   C    LE A
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGIL---NQMVDRGCLPDITTFNTLIAALCTGNRLEEA 283

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++ +++    +S P++ T++ LI+ LCK G    A+ LFEEM       PD +TYN LI
Sbjct: 284 LDLARQVTVKGVS-PDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLI 341

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C  GK+ +A  +++ M++ GC  +   Y T+++G CK+ +++EA+EVFD+M    + 
Sbjct: 342 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 401

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            + I + TLI+  C+  ++D+A EL+ +M   G + + +T+N IL   C++G I++A  +
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 461

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LE +  +G  ++  +Y  ++N  C+ G  + A+++LR M  +G  P     N +L  L +
Sbjct: 462 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 521

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL-----FAFELLDELVIKE 514
                DA      + E+G  P++ ++ ++   +CRG   +     F  E++D+  I E
Sbjct: 522 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 579



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 138/266 (51%), Gaps = 8/266 (3%)

Query: 256 EAIELFEEMVSK--DQILP------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           E  +LF++ V    +Q+ P      D + YN L++    G K+   + +   M   G  P
Sbjct: 28  EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 87

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V  + TLM   C+  +++ A  + +EM +  + PD   +TTL+  F   G ++ AL + 
Sbjct: 88  DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 147

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M E GC A  VT N+++ G C+ G++E+ALG +++   DG   ++ +Y   +N  CQ 
Sbjct: 148 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 207

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
             +  A++++ +M+  G  P   T N ++  LCK G  E+A   L  +V+ G  P+  ++
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267

Query: 488 ALLVELICRGRKLLFAFELLDELVIK 513
             L+  +C G +L  A +L  ++ +K
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVK 293



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   +  TY TI+D L +  + E  + V  QM        +GI  N +         
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL------QGISRNAI--------- 405

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCI 204
                                  +T ++ L +  ++D A   +   NQ +   L+PN   
Sbjct: 406 ---------------------TFNTLIDGLCKDKKIDDAFELI---NQMISEGLQPNNIT 441

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++ H+CK+G ++ A ++L+ M  +     +++TY TLI+GLCK GR + A+++   M
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEV-DVVTYGTLINGLCKAGRTQVALKVLRGM 500

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  + P    YN ++    R   +  A  +   M   G  P+   Y  +  G C+ G 
Sbjct: 501 RIKG-MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 559

Query: 325 LQEAKEVFDEM 335
               KE FD M
Sbjct: 560 --PIKEAFDFM 568


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 222/428 (51%), Gaps = 14/428 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G+  +  T+ T++  L ++ K     A++ +M  + C+     +  ++         +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222

Query: 148 RVLEMFHKIHPITREKPSLKA----ISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNT 202
             L + +K+     EK  ++A     ST ++ L +   VD A N F +  N+ +R  P+ 
Sbjct: 223 LALNLLNKM-----EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR--PDV 275

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             ++ LI   C  G    A  +L +M + +++ PN++T+++LID   K G+  EA +LF+
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKIN-PNVVTFNSLIDAFAKEGKLIEAEKLFD 334

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM+ +  I P+ +TYN LI+GFC   ++D A++I   M +  C P+V  Y TL+NGFCK 
Sbjct: 335 EMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            K+ +  E+F +M    L  +T+ YTTLI+ F +A   D A  + K+M   G   +I+T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N +L GLC+ GK+E+A+ + E L    +  +  +Y I+    C+ G++E   +L   +  
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G  P     N ++   CK G+ E+A      + E G  P+S ++  L+    R      
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573

Query: 503 AFELLDEL 510
           + EL+ E+
Sbjct: 574 SAELIKEM 581



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 17/481 (3%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K D  V+     V +R     +     +S I   K+    +  F    E  G +HN  TY
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTY 103

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH-ERVLEMFHKIH 157
             +++ L R  +     A+L +M     K   G  +  +    N   H  R+ E    + 
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMM----KLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159

Query: 158 PITR--EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHH 212
            +     +P     +T ++ L + N+   A   +    + + +K   P+   +  +I   
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV----ERMVVKGCQPDLVTYGAVINGL 215

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CKRG  + A  +L +M+K ++   +++ YST+ID LCK     +A+ LF EM +K  I P
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIE-ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRP 273

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D  TY+ LI   C  G+   A +++  M     NPNV  + +L++ F KEGKL EA+++F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           DEM    + P+ + Y +LIN FC   R+DEA ++   M  + C  D+VT+N ++ G C+ 
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
            K+ + + +   +   G+  N  +Y  +++   Q  + + A  + + M+  G  P+  T 
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           N LL  LCK G  E A +    L +   +P+  ++ ++ E +C+  K+   ++L   L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513

Query: 513 K 513
           K
Sbjct: 514 K 514



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 212/440 (48%), Gaps = 40/440 (9%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
            +++GA I+ +    EP  AL + N + + K    +   Y+T++D L +Y+  +  DA  
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVD--DA-- 259

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
                          LNL     N             I P      SL  IS   N    
Sbjct: 260 ---------------LNLFTEMDN-----------KGIRPDVFTYSSL--ISCLCNYGRW 291

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           S+   L  + L+      ++ PN   FN LI    K G L  A ++  EM +  +  PN+
Sbjct: 292 SDASRLLSDMLER-----KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID-PNI 345

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +TY++LI+G C + R  EA ++F  MVSKD  LPD +TYN LI+GFC+  KV    ++  
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKD-CLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M   G   N   YTTL++GF +      A+ VF +M +  + P+ + Y TL++  C+ G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           ++++A+ + + +++   + DI T+NI+  G+C+ GK+E+   +   L   G+  +  +Y 
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +++  C+KG  E+A  L   M   G LP   T N L+    + G    +A  +  +   
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584

Query: 479 GFKPESDSWALLVELICRGR 498
            F  ++ ++ L+ +++  GR
Sbjct: 585 RFAGDASTYGLVTDMLHDGR 604



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 1/278 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           NL TY+ +I+ LC+  +   A+ +  +M+ K    P  +T N L++GFC G ++  A  +
Sbjct: 99  NLYTYNIMINCLCRRSQLSFALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           ++ M   G  P+   +TTL++G  +  K  EA  + + M     +PD + Y  +IN  C+
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G  D AL LL +M++   +AD+V ++ ++  LC+   +++AL +  ++   GI  +  +
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C  G    A  LL  ML R   P+  T N L+    K G   +A      ++
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +    P   ++  L+   C   +L  A ++   +V K+
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375


>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 229/461 (49%), Gaps = 57/461 (12%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM------ 121
           L+K +K+   +LE FN V  +   +H   T++ IL  L + +KF++ + +L+ +      
Sbjct: 66  LLKIQKDHVLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFI 125

Query: 122 ------------TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
                       +Y  C     +F +L K  ++        + F ++       P++++ 
Sbjct: 126 DLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGF-LPTVESC 184

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +  L+ L++ ++VD+A  F K                                    EM+
Sbjct: 185 NAYLSSLLDLHRVDIALAFYK------------------------------------EMR 208

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           + ++S PN+ T + ++   CK+G+  +A+++FEEM S   I P+  +YN LI G+CR G 
Sbjct: 209 RCRIS-PNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVG-ISPNDTSYNTLIMGYCRKGL 266

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           ++ A K+   M+  G   NV  + +L++GFCKEGKL EA +VF EMK   + P+TI Y T
Sbjct: 267 LNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNT 326

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LIN   + G  +    L +EM   G KADI+T+N ++ GLC+EGK ++A  M+++L  + 
Sbjct: 327 LINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKEN 386

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N +++  +++  C +   ++A +L + M+  G  P+  T N L+   CK    E A 
Sbjct: 387 LVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAF 446

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           + L  + E  F P SD  + +   +C   K   A +L  EL
Sbjct: 447 LVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSEL 487



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 1/271 (0%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           + +L   L    +FR A + F +M      LP   + N  +       +VD A    + M
Sbjct: 149 FDSLFKTLAHMKKFRNATDTFLQMKGYG-FLPTVESCNAYLSSLLDLHRVDIALAFYKEM 207

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           +    +PNV+    +M  FCK GKL++A +VF+EM++  + P+   Y TLI  +CR G +
Sbjct: 208 RRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLL 267

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           + A++L   M+ +G +A++VTFN ++ G C+EGK+ EA  +  ++    +  N  +Y  +
Sbjct: 268 NSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTL 327

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +N   Q G  E    L   M   G      T N L++ LCK G  + AA  +  L +   
Sbjct: 328 INGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENL 387

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELV 511
            P + +++ L+   C       AF+L   +V
Sbjct: 388 VPNASTFSALISGQCIRNNSDRAFQLYKSMV 418



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 2/178 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L + PNT  +N LI  H + G  E    + +EM ++ +   +++TY+ LI GLCK G+ +
Sbjct: 315 LNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVK-ADILTYNALILGLCKEGKTK 373

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  + +E+  K+ ++P+A T++ LI G C     DRA ++ + M   GC+PN   +  L
Sbjct: 374 KAAYMVKEL-DKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNML 432

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           ++ FCK    + A  V  EM      P +   + + +  C  G+   A++L  E+K R
Sbjct: 433 VSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSELKAR 490



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/296 (20%), Positives = 113/296 (38%), Gaps = 61/296 (20%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           + E    ++    S   L T+S ++  L KN +F+ A     E++ K          +VL
Sbjct: 76  SLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSA-----ELILK----------SVL 120

Query: 281 IDGFCRGGKVDRAKKIMEFM----KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           + GF     +D   K+ E +    +    +P VF+  +L        K + A + F +MK
Sbjct: 121 VKGF-----IDLPDKLFEAILYSYRMCDSSPRVFD--SLFKTLAHMKKFRNATDTFLQMK 173

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
            +   P        ++      RVD AL   KEM+      ++ T N+++   C+     
Sbjct: 174 GYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKS---- 229

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
                                          G+LEKA+++   M   G  P+  + N L+
Sbjct: 230 -------------------------------GKLEKAVQVFEEMESVGISPNDTSYNTLI 258

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           +  C+ G+   A      +   G +    ++  L++  C+  KL  A ++  E+ +
Sbjct: 259 MGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKV 314


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 209/409 (51%), Gaps = 8/409 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T +++L+     K+     A++ QM     +     F  L+       LH + 
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKA 206

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    +  + +   +P+L      +N L +   +DLA N L    +  +++ N  I++ 
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN-KMEAAKIEANVVIYST 265

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK    + A  +  EM+   +  PN+ITYS+LI  LC   R+ +A  L  +M+ +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVR-PNVITYSSLISCLCNYERWSDASRLLSDMIER 324

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I P+ +T+N LID F + GK+  A+K+ + M     +P++F Y++L+NGFC   +L E
Sbjct: 325 -KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AK +F+ M +    P+ + Y TLIN FC+A R+DE +EL +EM +RG   + VT+  ++ 
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G  +    + A  + +++  DG++ N  +Y  +L+  C+ G+LEKA+ +   +      P
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              T N ++  +CKAG  ED       L   G KP+   +  ++   CR
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 206/403 (51%), Gaps = 12/403 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
           + G+  +  T+ T++  L  + K     A++ +M    C+      G+ +N +    +  
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTC 203
           L      + +K+     E  ++   ST ++ L +    D A N F +  N+ +R  PN  
Sbjct: 243 L---AFNLLNKMEAAKIE-ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR--PNVI 296

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            ++ LI   C       A  +L +M + +++ PN++T++ LID   K G+  EA +L++E
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVEAEKLYDE 355

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ K  I PD  TY+ LI+GFC   ++D AK + E M +  C PNV  Y TL+NGFCK  
Sbjct: 356 MI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++ E  E+F EM    L  +T+ YTTLI+ F +A   D A  + K+M   G   +I+T+N
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            +L GLC+ GK+E+A+ + E L    +     +Y I++   C+ G++E   +L   +  +
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           G  P     N ++   C+ G+ E+A      + E G  P+S +
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 218/434 (50%), Gaps = 18/434 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNC 143
           ++ G +HN  TY  +++   R  +     A+L +M    YE         LN   H    
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 144 S----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
           S    L ++++EM ++   IT         +T ++ L   N+   A   +    Q    +
Sbjct: 172 SDAVALVDQMVEMGYRPDTIT--------FTTLIHGLFLHNKASEAVALVDRMVQR-GCQ 222

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   + +++   CKRG ++ AF +L +M+ +++   N++ YST+ID LCK     +A+ 
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE-ANVVIYSTVIDSLCKYRHEDDALN 281

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM +K  + P+ +TY+ LI   C   +   A +++  M     NPNV  +  L++ F
Sbjct: 282 LFTEMENKG-VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            KEGKL EA++++DEM    + PD   Y++LIN FC   R+DEA  + + M  + C  ++
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++ G C+  +I+E + +  ++   G+  N  +Y  +++   Q  + + A  + + 
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G  P+  T N LL  LCK G  E A +    L     +P   ++ +++E +C+  K
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520

Query: 500 LLFAFELLDELVIK 513
           +   ++L   L +K
Sbjct: 521 VEDGWDLFCSLSLK 534



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 191/413 (46%), Gaps = 40/413 (9%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           KA   V   D  V    +   +++G  ++ +    +   A  + N +   K    N   Y
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEANVVIY 263

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
           +T++D L +Y+                   HE   LNL     N  +             
Sbjct: 264 STVIDSLCKYR-------------------HEDDALNLFTEMENKGV------------- 291

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
               +P++   S+ ++ L    +   A   L    +  ++ PN   FN LI    K G L
Sbjct: 292 ----RPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKL 346

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
             A ++  EM K  +  P++ TYS+LI+G C + R  EA  +FE M+SKD   P+ +TYN
Sbjct: 347 VEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYN 404

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            LI+GFC+  ++D   ++   M   G   N   YTTL++GF +      A+ VF +M + 
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            + P+ + Y TL++  C+ G++++A+ + + ++    +  I T+NI++ G+C+ GK+E+ 
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             +   L   G+  +   Y  +++  C+KG  E+A  L R M   G LP   T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 3/260 (1%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI LF  MV K + LP    +N L+    +  K D    + E M+  G + N++ Y
Sbjct: 65  KLDDAIGLFGGMV-KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY 123

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L+N FC+  ++  A  +  +M     +P  +  ++L+N +C   R+ +A+ L+ +M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + D +TF  ++ GL    K  EA+ +++++   G   N  +Y +V+N  C++G+++ 
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLV 491
           A  LL  M       +    + ++  LCK    ED A+ LF  +E  G +P   +++ L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKY-RHEDDALNLFTEMENKGVRPNVITYSSLI 302

Query: 492 ELICRGRKLLFAFELLDELV 511
             +C   +   A  LL +++
Sbjct: 303 SCLCNYERWSDASRLLSDMI 322



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 153/318 (48%), Gaps = 2/318 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R  P+   FN L+    K    +    + ++M++  +S+ NL TY+ LI+  C+  +   
Sbjct: 80  RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISL 138

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L  +M+ K    P  +T + L++G+C G ++  A  +++ M   G  P+   +TTL+
Sbjct: 139 ALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G     K  EA  + D M     +P+ + Y  ++N  C+ G +D A  LL +M+    +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           A++V ++ ++  LC+    ++AL +  ++   G+  N  +Y  +++  C       A  L
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M+ R   P+  T N L+    K G   +A      +++    P+  +++ L+   C 
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377

Query: 497 GRKLLFAFELLDELVIKE 514
             +L  A  + + ++ K+
Sbjct: 378 HDRLDEAKHMFELMISKD 395



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 91/200 (45%)

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +Y  ++       KL +A  +F  M      P    +  L++   +  + D  + L ++M
Sbjct: 52  DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +  G   ++ T+NI++   CR  +I  AL +L K+   G   +  +   +LN  C    +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+ L+  M+  G+ P   T   L+  L     A +A   +  +V+ G +P   ++ ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231

Query: 491 VELICRGRKLLFAFELLDEL 510
           V  +C+   +  AF LL+++
Sbjct: 232 VNGLCKRGDIDLAFNLLNKM 251


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 256/561 (45%), Gaps = 75/561 (13%)

Query: 2   NSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTP--KADPPVETSDTCVDARKRSRF 59
            ++R +L   C    FS+ S     +S  E +++     K D  V+       +R R R 
Sbjct: 13  GTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRL 72

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK----FEAVD 115
           I      S++   K+    L++   + E KG  HN  T + +++   R +K    F A+ 
Sbjct: 73  IDFSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131

Query: 116 AVLRQMTYETCKFHEGIFLNLM----KHFSNCSLHERVLEMFHKIHPITRE--------- 162
            +++ + YE         +N +    +      L +R++EM HK   IT           
Sbjct: 132 KIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190

Query: 163 ------------------KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
                             +P+       L ++ +S Q  LA   L+   +  ++K +   
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER-KIKLDAVK 249

Query: 205 FNILIKHHCKRGTLESAFEVLKEM-----KKSQMSY------------------------ 235
           ++I+I   CK G+L++AF +  EM     K   + Y                        
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 236 -----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
                P+++ +S LID   K G+ REA EL +EM+ +  I PD +TY  LIDGFC+  ++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQL 368

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D+A  +++ M + GC PN+  +  L+NG+CK   + +  E+F +M    +  DT+ Y TL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I  FC  G+++ A EL +EM  R  + DIV++ I+L GLC  G+ E+AL + EK+    +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
            L+   Y I+++  C   +++ A +L   +  +G  P   T N ++  LCK G   +A +
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 471 ALFGLVEMGFKPESDSWALLV 491
               + E G  P   ++ +L+
Sbjct: 549 LFRKMEEDGHSPNGCTYNILI 569



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 237/500 (47%), Gaps = 17/500 (3%)

Query: 11  CCRFSSFSTSSSSLPWISPL----EVIKANT--------PKADPPVETSDTCVDARKRSR 58
           CCR    S + S++  I  L    + +  +T         +    +E  D  V+   +  
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
            I+  A ++ +    +   A+ + + + E  GF  N  TY  +L  + +  +      +L
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           R+M     K     +  ++         +    +F+++  I   K  +   +T +     
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIIIYTTLIRGFCY 294

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           + + D     L+   +  ++ P+   F+ LI    K G L  A E+ KEM +  +S P+ 
Sbjct: 295 AGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS-PDT 352

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +TY++LIDG CK  +  +A  + + MVSK    P+  T+N+LI+G+C+   +D   ++  
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDGLELFR 411

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M   G   +   Y TL+ GFC+ GKL+ AKE+F EM +  ++PD + Y  L++  C  G
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
             ++ALE+ +++++   + DI  +NII+ G+C   K+++A  +   L   G+  +  +Y 
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I++   C+KG L +A  L R M   G  P+  T N L+      G A  +A  +  +   
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591

Query: 479 GFKPESDSWALLVELICRGR 498
           GF  ++ +  ++V+++  GR
Sbjct: 592 GFSVDASTVKMVVDMLSDGR 611



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 225/438 (51%), Gaps = 12/438 (2%)

Query: 76  QCALEIFNTVSEQKG-FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
            C   +F++VS+ KG  ++     + I+D     K+ +AVD + ++MT    +     F 
Sbjct: 22  SCYGRVFSSVSDGKGKVSYRERLRSGIVD----IKEDDAVD-LFQEMTRSRPRPRLIDFS 76

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            L    +    ++ VL++  ++  +     +L  +S  +N      ++ LA + +    +
Sbjct: 77  RLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK 135

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGR 253
            L  +P+T  F+ LI   C  G +  A E++  M   +M + P LIT + L++GLC NG+
Sbjct: 136 -LGYEPDTVTFSTLINGLCLEGRVSEALELVDRM--VEMGHKPTLITLNALVNGLCLNGK 192

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+ L + MV +    P+ +TY  ++   C+ G+   A +++  M+      +   Y+
Sbjct: 193 VSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            +++G CK+G L  A  +F+EM+    K D I YTTLI  FC AGR D+  +LL++M +R
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
               D+V F+ ++    +EGK+ EA  + +++   GI  +  +Y  +++  C++ +L+KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             +L LM+ +G  P+  T N L+   CKA + +D       +   G   ++ ++  L++ 
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 494 ICRGRKLLFAFELLDELV 511
            C   KL  A EL  E+V
Sbjct: 432 FCELGKLEVAKELFQEMV 449



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 7/339 (2%)

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           E + VDL Q   +      R +P    F+ L     +    +   ++ K+M+   +++ N
Sbjct: 53  EDDAVDLFQEMTRS-----RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-N 106

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           L T S +I+  C+  +   A     +++ K    PD +T++ LI+G C  G+V  A +++
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKII-KLGYEPDTVTFSTLINGLCLEGRVSEALELV 165

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   G  P +     L+NG C  GK+ +A  + D M     +P+ + Y  ++   C++
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G+   A+ELL++M+ER  K D V ++II+ GLC++G ++ A  +  ++   G   +   Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++   C  G  +   +LLR M+ R   P     + L+    K G   +A      +++
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
            G  P++ ++  L++  C+  +L  A  +LD +V K  G
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 217/417 (52%), Gaps = 8/417 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS-NCSLHERVLEM 152
           N  T   ++    +  +F+ VDAV+ +M  + C F + +  N+M          E  + +
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEME-KRCVFPDVVTHNVMVDARFRAGDAEAAMAL 152

Query: 153 FHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
              +  +++  KP +   ++ L  L  S   D A    K  +    + P+   F ILI  
Sbjct: 153 VDSM--VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD-FGVAPDVRSFTILIGG 209

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C+ G +E A ++ KEM+   +  P+L+++S LI    + G+   A+    EM     ++
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIK-PDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG-LV 267

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD + Y ++I GFCR G +  A ++ + M   GC P+V  Y TL+NG CKE +L +A+ +
Sbjct: 268 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            +EM+   + PD   +TTLI+ +C  G++D+AL+L   M  +  + DIVT+N ++ G+CR
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +G +++A  + + +    I+ N  +Y I+++  C+KG++E A   L  M+ +G LP+  T
Sbjct: 388 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 447

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            N ++   C++G        L  ++     P+  ++  L+    +  K+  AF+LL+
Sbjct: 448 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 504



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 230/484 (47%), Gaps = 26/484 (5%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +  VDAR R+                + + A+ + +++   KG      TY ++
Sbjct: 128 PDVVTHNVMVDARFRA---------------GDAEAAMALVDSMV-SKGLKPGIVTYNSV 171

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           L  L R   ++    V ++M           F  L+  F      E  L+++ ++     
Sbjct: 172 LKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH-RG 230

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
            KP L + S  + L     ++D A  +L+   +   L P+  I+ ++I   C+ G +  A
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLR-EMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 289

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             V  EM       P+++TY+TL++GLCK  R  +A  L  EM  +  + PD  T+  LI
Sbjct: 290 LRVRDEMVGCG-CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG-VPPDLCTFTTLI 347

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G+C  GK+D+A ++ + M N    P++  Y TL++G C++G L +A +++D+M +  + 
Sbjct: 348 HGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIF 407

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ + Y+ LI+  C  G+V++A   L EM  +G   +I+T+N I+ G CR G + +    
Sbjct: 408 PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKF 467

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L+K+  + +  +  +Y  +++   ++ ++  A +LL +M      P   T N L+     
Sbjct: 468 LQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 527

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI------KES 515
            G  ++A      +   G +P+  ++  ++           AF+L DE++       + +
Sbjct: 528 HGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAA 587

Query: 516 GTIQ 519
           GT+Q
Sbjct: 588 GTVQ 591



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 183/348 (52%), Gaps = 37/348 (10%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT   NI++ ++CK    +    V+ EM+K +  +P+++T++ ++D   + G    A+ L
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEK-RCVFPDVVTHNVMVDARFRAGDAEAAMAL 152

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            + MVSK  + P  +TYN ++ G CR G  D+A ++ + M + G  P+V ++T L+ GFC
Sbjct: 153 VDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211

Query: 321 KEGKLQEAKEVFDEMKN-----------------------------------FLLKPDTI 345
           + G+++EA +++ EM++                                   F L PD +
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YT +I  FCRAG + +AL +  EM   GC  D+VT+N +L GLC+E ++ +A G+L ++
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+  +  ++  +++  C +G+L+KA++L   ML +   P   T N L+  +C+ G  
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           + A      +      P   ++++L++  C   ++  AF  LDE++ K
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 439



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 146/281 (51%), Gaps = 1/281 (0%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S  S  N  T + ++   CK   F +   +  EM  K  + PD +T+NV++D   R G  
Sbjct: 88  SSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAGDA 146

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           + A  +++ M + G  P +  Y +++ G C+ G   +A EVF EM +F + PD   +T L
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I  FCR G ++EAL++ KEM+ RG K D+V+F+ ++G   R GK++ A+  L ++   G+
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 266

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +   Y +V+   C+ G +  A+ +   M+  G LP   T N LL  LCK     DA  
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 326

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L  + E G  P+  ++  L+   C   KL  A +L D ++
Sbjct: 327 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 36/310 (11%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    +  LI    ++ + REA E F  ++     +P A +  +L     R G    A  
Sbjct: 23  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA-LSRAGWPHLAAD 81

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
               + ++    N +    +++ +CK  +  +   V  EM+   + PD + +  +++   
Sbjct: 82  AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 141

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIIL----------------------------- 386
           RAG  + A+ L+  M  +G K  IVT+N +L                             
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 387 ------GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
                 GG CR G+IEEAL + +++ + GI  +  S+  ++    ++G+++ A+  LR M
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
            C G +P       ++   C+AG+  DA      +V  G  P+  ++  L+  +C+ R+L
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321

Query: 501 LFAFELLDEL 510
           L A  LL+E+
Sbjct: 322 LDAEGLLNEM 331


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 215/430 (50%), Gaps = 19/430 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   +  TY +++D      +++ V  +L +M  E     +  F  L+          
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK---EG 279

Query: 148 RVLEMFHKIHPITR--EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTC 203
           R+LE    +  +++  EKP +   +  +        V  A+      N+ ++  L+P+  
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF---NRMVKRGLEPDVL 336

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N+LI  +CK   ++ A  + KE+    +  P + +Y++LIDGLC +GR     +L +E
Sbjct: 337 NYNVLIDGYCKTKMVDEAMVLFKELCNKNL-VPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M    Q  PD +TYN+LID  C+ G++  A  ++  M   G  PN+  Y  +M+G+C   
Sbjct: 396 MHGSAQP-PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +  AK++F+ M    L+PD + Y  LIN +C+   VDEA+ L KEM+ +    DI ++N
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYN 514

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC  G+I     +L+++   G   +  +Y I+L+  C+    +KAI L R  +  
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR-QIVE 573

Query: 444 GFLPHYATSNELLVRLCKA---GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           G  P + T++ ++  LCK     MAED   AL  L+  G  P   ++ +L+  +C+    
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAED---ALKHLLMHGCSPNVQTYTILINALCKDGSF 630

Query: 501 LFAFELLDEL 510
             A  LL ++
Sbjct: 631 GEAMLLLSKM 640



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 210/425 (49%), Gaps = 8/425 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G+  +  TY T+++ L++  + +A   +L++M   + + +  ++  L+           
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFN 206
            L +  +I     E+  L    T  +L+     V   Q   +   + +R  + P+   FN
Sbjct: 214 ALGLCSQI----GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ILI   CK G +  A  VL  M K +   P+++TY+ L++G C      EA ELF  MV 
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSK-RGEKPDIVTYNALMEGYCSRENVHEARELFNRMV- 327

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + PD L YNVLIDG+C+   VD A  + + + N    P + +Y +L++G C  G++ 
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
             K++ DEM      PD + Y  LI+  C+ GR+ EAL +L  M ++G K +IVT+N ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C    +  A  +  ++   G+  +  +Y +++N  C+   +++AI L + M  +  +
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLI 507

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P  A+ N L+  LC  G        L  + + G  P+  ++ +L++  C+ +    A  L
Sbjct: 508 PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL 567

Query: 507 LDELV 511
             ++V
Sbjct: 568 FRQIV 572



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 37/317 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++ + ++ ++ L  S ++   +  L   +   +  P+   +NILI   CK G +  A  
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ-PPDVVTYNILIDALCKEGRILEALG 426

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VL  M K  +  PN++TY+ ++DG C       A ++F  MV K  + PD L YNVLI+G
Sbjct: 427 VLVMMMKKGVK-PNIVTYNAMMDGYCLRNNVNVAKDIFNRMV-KSGLEPDILNYNVLING 484

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+   VD A  + + M++    P++ +Y +L++G C  G++   +E+ DEM +    PD
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPD 544

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKE------------------------------- 372
            I Y  L++ FC+    D+A+ L +++ E                               
Sbjct: 545 VITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKH 604

Query: 373 ---RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
               GC  ++ T+ I++  LC++G   EA+ +L K+  +    +  ++ I++    Q+ E
Sbjct: 605 LLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664

Query: 430 LEKAIELLRLMLCRGFL 446
            +KA +L   M+ RG +
Sbjct: 665 TDKAEKLREEMIARGLV 681



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 159/311 (51%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P T +F+ L+    + G   +A  +  +++   +S P++ T++ LI+          A  
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS-PSIATFTILINCYFHQSHTAFAFS 111

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   ++ K    P+ +T+N +I+GFC  G + +A    + +   G   + F Y TL+NG 
Sbjct: 112 LLATIL-KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGL 170

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K G+++ A  +  EM+   ++P+ + Y+ LI+  C+ G V +AL L  ++ ERG   D 
Sbjct: 171 SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA 230

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++ G C  G+ +E   +L K+  + +  +  ++ I+++  C++G + +A  +L +
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  RG  P   T N L+   C      +A      +V+ G +P+  ++ +L++  C+ + 
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 500 LLFAFELLDEL 510
           +  A  L  EL
Sbjct: 351 VDEAMVLFKEL 361



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 166/323 (51%), Gaps = 21/323 (6%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
           A+Y +++D L    +   V  +L +M + + +  + +  N++          R+LE    
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEM-HGSAQPPDVVTYNIL--IDALCKEGRILEALGV 427

Query: 156 IHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKH 211
           +  + ++  KP++   +  ++     N V++A++     N+ ++  L+P+   +N+LI  
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF---NRMVKSGLEPDILNYNVLING 484

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
           +CK   ++ A  + KEM+   +  P++ +Y++LIDGLC  GR     EL +EM    Q  
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNL-IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS- 542

Query: 272 PDALTYNVLIDGFCRGGKVDRA----KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           PD +TYN+L+D FC+    D+A    ++I+E     G  P+ +    +++  CK  KL+ 
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIVE-----GIWPDFYTNHAIVDNLCKGEKLKM 597

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A++    +      P+   YT LIN  C+ G   EA+ LL +M++     D +TF II+G
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657

Query: 388 GLCREGKIEEALGMLEKLWYDGI 410
            L +  + ++A  + E++   G+
Sbjct: 658 VLLQRNETDKAEKLREEMIARGL 680



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%)

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           CR   VD A      M      P    +  L+    + G    A  +F ++++  + P  
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             +T LINC+        A  LL  + + G + ++VTFN I+ G C  G I +AL   + 
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           L   G   ++ +Y  ++N   + G+++ A+ LL+ M      P+    + L+  LCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             DA      + E G   ++ ++  L++  C   +     +LL ++V
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 193/352 (54%), Gaps = 25/352 (7%)

Query: 190 KYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           KY ++ L   L PN  ++ +LI  H K G L  A  + + +    +  P++ T S  I G
Sbjct: 276 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV-LPDVQTCSAFIHG 334

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L KNGR +EA+++F E+  K  ++PD  TY+ LI GFC+ G+V++A ++ + M   G  P
Sbjct: 335 LLKNGRVQEALKVFSELKEKG-LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 393

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N+F Y  L++G CK G +Q A+++FD M    L+PD++ Y+T+I+ +C++  V EA  L 
Sbjct: 394 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 453

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM  +G +     +N ++ G C+EG +E+A+ +  ++   G +    S+  +++  C+ 
Sbjct: 454 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKS 512

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE----------------DAAIA 471
            ++++A +L + M+ +  +P + T   ++   CKAG  E                D   A
Sbjct: 513 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFA 572

Query: 472 LF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK---ESGTIQ 519
           LF  +V  G KP+  ++ L++   C+   L+ AF+L DE+V K     GTI 
Sbjct: 573 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIH 624



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 168/313 (53%), Gaps = 2/313 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N+LI   CK G +E A E+LK M  +    PN  T+  LI+G C+      A+EL
Sbjct: 79  NLITYNVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCREHNMGRALEL 137

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM  K  ++P A++Y  +I+G C    +  A K++E M  +G  PNV  Y+TL+ G+ 
Sbjct: 138 LDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 196

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            EG+++EA+ + D M    + PD   Y  +I+C  +AG+++EA   L E++ RG K D V
Sbjct: 197 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 256

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TF   + G  + GK+ EA    +++   G+  N   Y +++N   + G L +A+ + R +
Sbjct: 257 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 316

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G LP   T +  +  L K G  ++A      L E G  P+  +++ L+   C+  ++
Sbjct: 317 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 376

Query: 501 LFAFELLDELVIK 513
             AFEL DE+ +K
Sbjct: 377 EKAFELHDEMCLK 389



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 212/469 (45%), Gaps = 61/469 (13%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG   N  TY  I   L R K+         +M              L   ++ CS   
Sbjct: 3   EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKT----------GLKPDYNACS--- 49

Query: 148 RVLEMFHK---IHPITREKPSLKAISTCLNL---------LIESNQVDLAQNFLKYSNQH 195
            +++ F +   I  + R K  + +    +NL         L +  +++ A   LK     
Sbjct: 50  ALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK-GMIT 108

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-----SQMSY--------------- 235
           L  KPN+  F +LI+ +C+   +  A E+L EM+K     S +SY               
Sbjct: 109 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 168

Query: 236 --------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
                         PN++ YSTLI G    GR  EA  L + M S   + PD   YN +I
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM-SCSGVAPDIFCYNAII 227

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
               + GK++ A   +  ++  G  P+   +   + G+ K GK+ EA + FDEM +  L 
Sbjct: 228 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+   YT LIN   +AG + EAL + + +   G   D+ T +  + GL + G+++EAL +
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 347

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             +L   G+  +  +Y  +++  C++GE+EKA EL   M  +G  P+    N L+  LCK
Sbjct: 348 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 407

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +G  + A     G+ E G +P+S +++ +++  C+   +  AF L  E+
Sbjct: 408 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 456



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 205/430 (47%), Gaps = 8/430 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE-- 147
           G   N  TY  ++  L ++ K E    +L+ M    CK +   F  L++ +  C  H   
Sbjct: 75  GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGY--CREHNMG 132

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R LE+  ++       PS  +    +N L     + LA   L+       LKPN  +++ 
Sbjct: 133 RALELLDEMEK-RNLVPSAVSYGAMINGLCHCKDLSLANKLLE-KMTFSGLKPNVVVYST 190

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +   G +E A  +L  M  S ++ P++  Y+ +I  L K G+  EA     E+  +
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVA-PDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PDA+T+   I G+ + GK+  A K  + M ++G  PN   YT L+NG  K G L E
Sbjct: 250 G-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F  +    + PD    +  I+   + GRV EAL++  E+KE+G   D+ T++ ++ 
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G C++G++E+A  + +++   GI  N   Y  +++  C+ G++++A +L   M  +G  P
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T + ++   CK+    +A      +   G +P S  +  LV   C+   +  A  L 
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 488

Query: 508 DELVIKESGT 517
            E++ K   T
Sbjct: 489 REMLQKGFAT 498



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 195/404 (48%), Gaps = 56/404 (13%)

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
           HF   +L E  L +F  +H +    P ++  S  ++ L+++ +V  A        +   L
Sbjct: 300 HFKAGNLME-ALSIFRHLHALGV-LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK-GL 356

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   ++ LI   CK+G +E AFE+  EM    ++ PN+  Y+ L+DGLCK+G  + A 
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA-PNIFIYNALVDGLCKSGDIQRAR 415

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF+ M  K  + PD++TY+ +IDG+C+   V  A  +   M + G  P+ F Y  L++G
Sbjct: 416 KLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474

Query: 319 FCKEG----------------------------------KLQEAKEVFDEMKNFLLKPDT 344
            CKEG                                  K+QEA ++F EM    + PD 
Sbjct: 475 CCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 534

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKER-----------------GCKADIVTFNIILG 387
           + YTT+I+  C+AG+++EA  L KEM+ER                 G K D VT+ +++ 
Sbjct: 535 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIY 594

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
             C+E  + EA  + +++   G+      + +++   C++ +L +A +LL  M   G  P
Sbjct: 595 AHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 654

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             A  + L+    +AG  ++A     G+  +G  P++ +   LV
Sbjct: 655 SLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 698



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN  TY+ +  GLC+  R  EA   FEEM  K  + PD    + LIDGF R G +D   +
Sbjct: 8   PNTYTYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDEVLR 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           I + M + G   N+  Y  L++G CK GK+++A E+   M     KP++  +  LI  +C
Sbjct: 67  IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R   +  ALELL EM++R      V++  ++ GLC    +  A  +LEK+ + G+  N  
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 186

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  ++     +G +E+A  LL  M C G  P     N ++  L KAG  E+A+  L  +
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              G KP++ ++   +    +  K+  A +  DE++
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 184/385 (47%), Gaps = 27/385 (7%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q AL++F+ + E KG   +  TY++++    +  + E    +  +M  +    +  I+  
Sbjct: 342 QEALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+         +R  ++F  + P    +P     ST ++   +S  V  A+ F  +    
Sbjct: 401 LVDGLCKSGDIQRARKLFDGM-PEKGLEPDSVTYSTMIDGYCKSENV--AEAFSLFHEMP 457

Query: 196 LR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            + ++P++ ++N L+   CK G +E A  + +EM   Q  +   ++++TLIDG CK+ + 
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM--LQKGFATTLSFNTLIDGYCKSCKI 515

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK-----------------VDRAKKIM 297
           +EA +LF+EM++K QI+PD +TY  +ID  C+ GK                 VD    + 
Sbjct: 516 QEASQLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALF 574

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCR 356
           E M   G  P+   Y  ++   CKE  L EA ++ DE+    +L   TI +  LI   C+
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI-HDLLITALCK 633

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
              + EA +LL EM E G K  +   + ++      GK++EA  + E +   G+  +  +
Sbjct: 634 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 693

Query: 417 YRIVLNFSCQKGELEKAIELLRLML 441
              ++N +    + E A  L++ ++
Sbjct: 694 LIDLVNGNLNDTDSEDARNLIKQLV 718



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 98/192 (51%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G  PN + YT +  G C+  ++ EAK  F+EM+   LKPD    + LI+ F R G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +DE L +   M   G   +++T+N+++ GLC+ GK+E+A  +L+ +   G   N  ++ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C++  + +A+ELL  M  R  +P   +   ++  LC       A   L  +   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 480 FKPESDSWALLV 491
            KP    ++ L+
Sbjct: 181 LKPNVVVYSTLI 192



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 77/141 (54%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M E+G   +  T+ II  GLCR  ++ EA    E++   G+  +  +   +++   ++G+
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +++ + +  +M+  G   +  T N L+  LCK G  E AA  L G++ +G KP S ++ L
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 490 LVELICRGRKLLFAFELLDEL 510
           L+E  CR   +  A ELLDE+
Sbjct: 121 LIEGYCREHNMGRALELLDEM 141


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 206/393 (52%), Gaps = 4/393 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G  HN  T   +L+   R  +     + L +M     +     F +L+  F         
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L MF ++  +   KP++   +T ++ L +S QVD A + L    +   + P+   +N LI
Sbjct: 171 LYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLI 228

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C  G    A  ++  M K ++ YP++ T++ LID   K GR  EA E +EEM+ +  
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-S 286

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + PD +TY++LI G C   ++D A+++  FM + GC P+V  Y+ L+NG+CK  K++   
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++F EM    +  +T+ YT LI  +CRAG+++ A E+ + M   G   +I+T+N++L GL
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  GKIE+AL +L  +  +G+  +  +Y I++   C+ GE+  A ++   + C+G +P  
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
            T   +++ L K G+  +A      + E G  P
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 204/395 (51%), Gaps = 10/395 (2%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
           A ++ +L  +++ KK++ V  +  QM       +      L+  F  CS     L    K
Sbjct: 82  ADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHC 213
           +  +  E PS+    + LN     ++V    + L   +Q + +  KPN  I+N +I   C
Sbjct: 142 MIKLGHE-PSIVTFGSLLNGFCRGDRV---YDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K   +++A ++L  M+K  +  P+++TY++LI GLC +GR+ +A  +   M +K +I PD
Sbjct: 198 KSKQVDNALDLLNRMEKDGIG-PDVVTYNSLISGLCSSGRWSDATRMVSCM-TKREIYPD 255

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
             T+N LID   + G+V  A++  E M     +P++  Y+ L+ G C   +L EA+E+F 
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M +    PD + Y+ LIN +C++ +V+  ++L  EM +RG   + VT+ I++ G CR G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           K+  A  +  ++ + G++ N  +Y ++L+  C  G++EKA+ +L  M   G      T N
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            ++  +CKAG   DA      L   G  P  D W 
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMP--DIWT 468



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 181/337 (53%), Gaps = 9/337 (2%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           LN     +Q+ LA +FL    + ++L  +P+   F  L+   C+   +  A  +  +M  
Sbjct: 123 LNCFCRCSQLSLALSFL---GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM-- 177

Query: 231 SQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
             M Y PN++ Y+T+IDGLCK+ +   A++L   M  KD I PD +TYN LI G C  G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSGR 236

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
              A +++  M      P+VF +  L++   KEG++ EA+E ++EM    L PD + Y+ 
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI   C   R+DEA E+   M  +GC  D+VT++I++ G C+  K+E  + +  ++   G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N  +Y I++   C+ G+L  A E+ R M+  G  P+  T N LL  LC  G  E A 
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           + L  + + G   +  ++ +++  +C+  ++  A+++
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 141/251 (56%), Gaps = 2/251 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   FN LI    K G +  A E  +EM +  +  P+++TYS LI GLC   R  EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD-PDIVTYSLLIYGLCMYSRLDEA 310

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+F  MVSK    PD +TY++LI+G+C+  KV+   K+   M   G   N   YT L+ 
Sbjct: 311 EEMFGFMVSKG-CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C+ GKL  A+E+F  M    + P+ I Y  L++  C  G++++AL +L +M++ G  A
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DIVT+NII+ G+C+ G++ +A  +   L   G+  +  +Y  ++    +KG   +A  L 
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489

Query: 438 RLMLCRGFLPH 448
           R M   G LP+
Sbjct: 490 RKMKEDGILPN 500



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 175/343 (51%), Gaps = 17/343 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +    G+  N   Y TI+D L + K+ +    +L +M        +GI  +++
Sbjct: 170 ALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME------KDGIGPDVV 222

Query: 138 KH---FSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYS 192
            +    S      R  +    +  +T+ +  P +   +  ++  ++  +V  A+ F  Y 
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF--YE 280

Query: 193 NQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
               R L P+   +++LI   C    L+ A E+   M  S+  +P+++TYS LI+G CK+
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV-SKGCFPDVVTYSILINGYCKS 339

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +    ++LF EM S+  ++ + +TY +LI G+CR GK++ A++I   M   G +PN+  
Sbjct: 340 KKVEHGMKLFCEM-SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  L++G C  GK+++A  +  +M+   +  D + Y  +I   C+AG V +A ++   + 
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
            +G   DI T+  ++ GL ++G   EA  +  K+  DGI  N+
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 136/275 (49%), Gaps = 1/275 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           NL T + L++  C+  +   A+    +M+      P  +T+  L++GFCRG +V  A  +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYM 173

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            + M   G  PNV  Y T+++G CK  ++  A ++ + M+   + PD + Y +LI+  C 
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           +GR  +A  ++  M +R    D+ TFN ++    +EG++ EA    E++    +  +  +
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +++   C    L++A E+   M+ +G  P   T + L+   CK+   E        + 
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + G    + ++ +L++  CR  KL  A E+   +V
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 1/283 (0%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S+ +Y N   Y  ++    +  +  ++++LF  MV + + LP    ++ L+    +  K 
Sbjct: 39  SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMV-QCRPLPSIADFSRLLSAISKMKKY 97

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D    + E M+  G   N+     L+N FC+  +L  A     +M     +P  + + +L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +N FCR  RV +AL +  +M   G K ++V +N I+ GLC+  +++ AL +L ++  DGI
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  +Y  +++  C  G    A  ++  M  R   P   T N L+    K G   +A  
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               ++     P+  +++LL+  +C   +L  A E+   +V K
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 222/464 (47%), Gaps = 43/464 (9%)

Query: 83  NTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN 142
           +T  +Q+ ++  +  +   L++L +  K+      L QM     K    +   L+K    
Sbjct: 65  DTRPQQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFT 124

Query: 143 CSLHE---RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
               E   RV+E+  +        P   A +  ++    S++ D A N +    ++    
Sbjct: 125 SKRTEKAVRVMEILEQYG-----DPDSFAYNAVISGFCRSDRFD-AANRVILRMKYRGFS 178

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +NILI   C RG L+ A +V+ ++ +   + P +ITY+ LI+    +G   +A+ 
Sbjct: 179 PDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCN-PTVITYTILIEATIIHGSIDDAMR 237

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA-------------------------- 293
           L +EM+S+  + PD  TYNV++ G C+ G VDRA                          
Sbjct: 238 LLDEMMSR-GLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNE 296

Query: 294 ------KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
                 +++M  M   GC PN+  Y+ L++  C++GK  EA +V   MK   L PD   Y
Sbjct: 297 GRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCY 356

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             LI+ FC+ G+VD A+  + +M   G   DIV +N I+G LC++G+ +EAL + +KL  
Sbjct: 357 DPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEE 416

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G   N +SY  +       G+  +A+ ++  ML  G  P   T N L+  LC+ GM ++
Sbjct: 417 VGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDE 476

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           A   L  +    ++P   S+ +++  +C+  +++ A E+L  +V
Sbjct: 477 AIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMV 520



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 212/428 (49%), Gaps = 14/428 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           EQ G + ++  Y  ++    R  +F+A + V+ +M Y    F   +    +   S C+  
Sbjct: 139 EQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYR--GFSPDVVTYNILIGSLCARG 195

Query: 147 ERVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  L++  K+     E    P++   +  +   I    +D A   L        L+P+  
Sbjct: 196 K--LDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLD-EMMSRGLQPDMY 252

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N++++  CKRG ++ AFE +  +  +    P+L  Y+ L+ GL   GR+     L  +
Sbjct: 253 TYNVIVRGMCKRGLVDRAFEFVSNLNTT----PSLNLYNLLLKGLLNEGRWEAGERLMSD 308

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ K    P+ +TY+VLI   CR GK   A  ++  MK  G NP+ + Y  L++ FCKEG
Sbjct: 309 MIVK-GCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEG 367

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K+  A    D+M +    PD + Y T++   C+ GR DEAL + K+++E GC  +  ++N
Sbjct: 368 KVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYN 427

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            + G L   G    AL M+ ++  +G+  ++ +Y  +++  C+ G +++AI LL  M   
Sbjct: 428 TMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERT 487

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
            + P   + N +L+ LCKA    DA   L  +V+ G +P   ++ LLVE +       +A
Sbjct: 488 EWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYA 547

Query: 504 FELLDELV 511
            EL   LV
Sbjct: 548 VELAKSLV 555


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 200/353 (56%), Gaps = 5/353 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +P++   +T ++ L +   V+ A +   YS    R + PN   ++ LI   C  G L  A
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDL--YSEMDARGIFPNVITYSTLIYGFCLAGQLMEA 204

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           F +L EM    ++ PN+ TY+ L+D LCK G+ +EA  L   M +K+ + P+ ++YN L+
Sbjct: 205 FGLLNEMILKNIN-PNVYTYTILMDALCKEGKVKEAKNLLAVM-TKEGVKPNVVSYNTLM 262

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG+C  G+V  AK++   M   G NPNV++Y  +++  CK  ++ EA  +  E+ +  + 
Sbjct: 263 DGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMV 322

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+T+ Y++LI+ FC+ GR+  AL+LLKEM  RG  AD+VT+  +L  LC+   +++A  +
Sbjct: 323 PNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATAL 382

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K+   GI  NK +Y  +++  C+ G  + A +L + +L +G   +  T N ++  LCK
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            GM ++A      + E G  P++ ++ +++  +    +   A +LL E++ K+
Sbjct: 443 EGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKD 495



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 194/353 (54%), Gaps = 5/353 (1%)

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
           + R+ P +   +  +  L++      A +  K   Q   ++P+    NILI   C  G +
Sbjct: 3   LVRDTPPIMEFNKIVGSLVKMKHYPTAISLFK-QMQVKGIEPDLFTLNILINCFCHLGQM 61

Query: 219 ESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
             +F VL ++ K  + Y PN IT +TL+ GLC  G  ++++   +++V++   + D ++Y
Sbjct: 62  TFSFTVLGKILK--LGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQM-DQVSY 118

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
             L++G C+ G+   A K++  +++    PNV  Y T+++G CK+  + EA +++ EM  
Sbjct: 119 ATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDA 178

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             + P+ I Y+TLI  FC AG++ EA  LL EM  +    ++ T+ I++  LC+EGK++E
Sbjct: 179 RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKE 238

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L  +  +G+  N  SY  +++  C  GE++ A ++   M+ +G  P+  + N ++ 
Sbjct: 239 AKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMID 298

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           RLCK+   ++A   L  ++     P + +++ L++  C+  ++  A +LL E+
Sbjct: 299 RLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 206/379 (54%), Gaps = 17/379 (4%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E + AL++   + E +    N   Y TI+D L + K       +  +M         GIF
Sbjct: 130 ETRSALKLLRMI-EDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD------ARGIF 182

Query: 134 LNLMKH----FSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQN 187
            N++ +    +  C L  +++E F  ++ +  +   P++   +  ++ L +  +V  A+N
Sbjct: 183 PNVITYSTLIYGFC-LAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            L    +   +KPN   +N L+  +C  G +++A ++   M +  ++ PN+ +Y+ +ID 
Sbjct: 242 LLAVMTKE-GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVN-PNVYSYNIMIDR 299

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           LCK+ R  EA+ L  E++ K+ + P+ +TY+ LIDGFC+ G++  A  +++ M + G   
Sbjct: 300 LCKSKRVDEAMNLLREVLHKNMV-PNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPA 358

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V  YT+L++  CK   L +A  +F +MK   ++P+   YT LI+  C+ GR   A +L 
Sbjct: 359 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLF 418

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           + +  +GC+ ++ T+N+++ GLC+EG ++EAL M  K+  +G   +  ++ I++    +K
Sbjct: 419 QHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEK 478

Query: 428 GELEKAIELLRLMLCRGFL 446
            + +KA +LL  M+ +  L
Sbjct: 479 DQNDKAEKLLHEMIAKDLL 497



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 168/321 (52%), Gaps = 4/321 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +PNT   N L+K  C +G ++ +     +   +Q    + ++Y+TL++GLCK G  R
Sbjct: 74  LGYQPNTITLNTLMKGLCLKGEVKKSLH-FHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A++L   M+      P+ + YN +IDG C+   V+ A  +   M   G  PNV  Y+TL
Sbjct: 133 SALKLLR-MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + GFC  G+L EA  + +EM    + P+   YT L++  C+ G+V EA  LL  M + G 
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           K ++V++N ++ G C  G+++ A  M   +   G+  N  SY I+++  C+   +++A+ 
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LLR +L +  +P+  T + L+   CK G    A   L  +   G   +  ++  L++ +C
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371

Query: 496 RGRKLLFAFELLDELVIKESG 516
           + + L  A  L   + +KE G
Sbjct: 372 KNQNLDKATALF--MKMKERG 390



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 108/207 (52%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  ++    K      A  +F +M+   ++PD      LINCFC  G++  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ + G + + +T N ++ GLC +G+++++L   +K+   G  +++ SY  +LN  C+
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            GE   A++LLR++  R   P+    N ++  LCK  +  +A      +   G  P   +
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           ++ L+   C   +L+ AF LL+E+++K
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILK 214


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 4/316 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N +I   CK   L  A E+ KEMK  +   PN +T+S LIDG CKNG   E 
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECK-PNSVTFSALIDGFCKNGDVEEG 218

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L EEM  K  +  D   Y+ LI GFC  G ++R K++   M      PNV  Y+ LMN
Sbjct: 219 FGLLEEM-EKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMN 277

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK+ K +EA ++ D M    ++PD + YT L +   + GR  +A+++L  M +RG + 
Sbjct: 278 ALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEP 337

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VT+N I+ GLC+EG++++ALG+LE +   G   +  +Y  ++   C  G++++A++LL
Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397

Query: 438 RLMLCRGFL--PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            L++ + F   P     N ++  LCK      A    + +VE GF     ++ +L++   
Sbjct: 398 NLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYL 457

Query: 496 RGRKLLFAFELLDELV 511
              KL  A EL  + V
Sbjct: 458 SAGKLTKALELWKDAV 473



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 169/294 (57%), Gaps = 2/294 (0%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           AF VL  + K    + N+  ++ L+ G C++G   +A++LF  M+ ++ ++PD ++YN +
Sbjct: 113 AFGVLGLIMKRGF-HLNVYNFNLLLKGFCQSGDSHKAMDLFC-MMKRNCLIPDCVSYNTV 170

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I+G C+G ++  AK++ + MK   C PN   ++ L++GFCK G ++E   + +EM+   L
Sbjct: 171 INGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGL 230

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           + D   Y+ LI+ FC  G ++   EL  EM  +    ++VT++ ++  LC++ K +EA  
Sbjct: 231 EGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQ 290

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           ML+ +    +  +  +Y ++ +   + G    AI++L LM+ RG  P+  T N ++  LC
Sbjct: 291 MLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLC 350

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           K G  +DA   L  + + G KP+  +++ LV+ +C   K+  A +LL+ L+ KE
Sbjct: 351 KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 206/455 (45%), Gaps = 45/455 (9%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            +Y T+++ L + K+      + ++M    CK +   F  L+  F      E    +  +
Sbjct: 165 VSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEE 224

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHC 213
           +  +  E       S  ++       ++  +      N+ LR  + PN   ++ L+   C
Sbjct: 225 MEKMGLEGDVF-VYSALISGFCSKGDIERGKELF---NEMLRKNVTPNVVTYSCLMNALC 280

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K+   + A ++L  M   ++  P+++ Y+ L DGL KNGR  +AI++ + MV + +  P+
Sbjct: 281 KKQKWKEAAQMLDTMTGCKVR-PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE-EPN 338

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TYN +I+G C+ G+VD A  I+E M   G  P+V  Y+TL+ G C  GK+ EA ++ +
Sbjct: 339 NVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLN 398

Query: 334 EM--KNFLLKPDT-----------------------------------IGYTTLINCFCR 356
            +  K F +KPD                                    + Y  LI+ +  
Sbjct: 399 LLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLS 458

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           AG++ +ALEL K+  + G   +  T+ +++ GLC+   +  A G+  K    G     + 
Sbjct: 459 AGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSE 518

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++   C++  +E+A  L + M      P   + N ++    KAG  E A   L  ++
Sbjct: 519 YNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEML 578

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            M   P++ ++++L+    +  +L  A  L + +V
Sbjct: 579 NMNLVPDNITFSILINRFLKLGQLDEAASLYERMV 613



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 37/294 (12%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +N +I   CK G ++ A  +L+ M K +   P+++TYSTL+ GLC  G+  EA+
Sbjct: 336 EPNNVTYNAIINGLCKEGRVDDALGILETMAK-KGKKPDVVTYSTLVKGLCGVGKIDEAV 394

Query: 259 ELFEEMVSKD-QILPDA-----------------------------------LTYNVLID 282
           +L   ++SK+  I PD                                    +TYN+LID
Sbjct: 395 DLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+   GK+ +A ++ +   ++G +PN   YT L+NG CK   L  AK +F++ +    +P
Sbjct: 455 GYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRP 514

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
               Y TL+   CR   V++A  L +EM+      D+V+FNII+ G  + G +E A  +L
Sbjct: 515 TVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            ++    +  +  ++ I++N   + G+L++A  L   M+  G +P     + LL
Sbjct: 575 LEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLL 628



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 86/161 (53%), Gaps = 2/161 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P    +N L+   C+  ++E A  + +EM+ +    P++++++ +IDG  K G   E+ 
Sbjct: 513 RPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD-PDVVSFNIIIDGTLKAGDV-ESA 570

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +     +    ++PD +T+++LI+ F + G++D A  + E M + G  P+   + +L+ G
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +  +GK ++   +  +M +  +  D+   +T++ C C   +
Sbjct: 631 YSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK 671


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 219/430 (50%), Gaps = 18/430 (4%)

Query: 86  SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF-HEGIFLNLMKHFSNCS 144
           +E+ G   +   Y T++    RY + +A   ++  M      + +  I   L        
Sbjct: 135 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGE 194

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PN 201
               + +M H+       +PS+   +  L  + +S     A   L      +R K   PN
Sbjct: 195 ALSLLDDMLHRGC-----QPSVVTYTVLLEAVCKSTGFGQAMEVL----DEMRAKGCTPN 245

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N++I   C+ G ++ A E L  +       P+ ++Y+T++ GLC   R+ +  ELF
Sbjct: 246 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQ-PDTVSYTTVLKGLCAAKRWEDVEELF 304

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            EM+ K+  +P+ +T+++L+  FCRGG V+RA +++E M  +GC  N      ++N  CK
Sbjct: 305 AEMMEKN-CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 363

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G++ +A +  + M ++   PDTI YTT++   CRA R ++A ELLKEM  + C  + VT
Sbjct: 364 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 423

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           FN  +  LC++G IE+A  ++E++   G  +N  +Y  ++N  C +G ++ A+EL   M 
Sbjct: 424 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 483

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
           C+   P+  T   LL  LC A   + AA  L  +++    P   ++ +LV   C+   + 
Sbjct: 484 CK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 540

Query: 502 FAFELLDELV 511
            A EL+++++
Sbjct: 541 EAIELVEQMM 550



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 222/438 (50%), Gaps = 18/438 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E  N +S   GF  +  +Y T+L  L   K++E V+ +  +M  + C  +E  F  L+
Sbjct: 265 AREFLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSN 193
           + F    + ER +++  ++           A +T  N++I +     +VD A  FL    
Sbjct: 324 RFFCRGGMVERAIQVLEQM-----SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMG 378

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            +    P+T  +  ++K  C+    E A E+LKEM +     PN +T++T I  LC+ G 
Sbjct: 379 SY-GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP-PNEVTFNTFICILCQKGL 436

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A  L E+M S+     + +TYN L++GFC  G+VD A   +E   +  C PN   YT
Sbjct: 437 IEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYT 492

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+ G C   +L  A E+  EM      P+ + +  L++ FC+ G +DEA+EL+++M E 
Sbjct: 493 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 552

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  +++T+N +L G+ ++   EEAL +L  L  +G+  +  +Y  ++    ++  +E+A
Sbjct: 553 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 612

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVE 492
           I++  ++   G  P     N++L+ LCK     D AI  F  +V  G  P   ++  L+E
Sbjct: 613 IKMFHIVQDLGMRPKAVIYNKILLALCKR-CNTDGAIDFFAYMVSNGCMPNELTYITLIE 671

Query: 493 LICRGRKLLFAFELLDEL 510
            +     L    +LL EL
Sbjct: 672 GLANEDFLKETRDLLREL 689



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 162/314 (51%), Gaps = 5/314 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LI++ C+RG    A  VL+  ++S  +  ++  Y+TL+ G C+ G+   A  
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV-DVFAYNTLVAGYCRYGQLDAARR 165

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M     + PDA TY  +I G C  G+V  A  +++ M + GC P+V  YT L+   
Sbjct: 166 LIASM----PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 221

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK     +A EV DEM+     P+ + Y  +IN  CR GRVD+A E L  +   G + D 
Sbjct: 222 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 281

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++  +L GLC   + E+   +  ++       N+ ++ +++ F C+ G +E+AI++L  
Sbjct: 282 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 341

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G   +    N ++  +CK G  +DA   L  +   G  P++ S+  +++ +CR  +
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 401

Query: 500 LLFAFELLDELVIK 513
              A ELL E+V K
Sbjct: 402 WEDAKELLKEMVRK 415



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 172/357 (48%), Gaps = 42/357 (11%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +  +Y T+L  L R +++E    +L++M  + C  +E  F                
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF---------------- 424

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
                               +T + +L +   ++ A   ++  ++H   + N   +N L+
Sbjct: 425 --------------------NTFICILCQKGLIEQATMLIEQMSEH-GCEVNIVTYNALV 463

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C +G ++SA E+   M       PN ITY+TL+ GLC   R   A EL  EM+ KD 
Sbjct: 464 NGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD- 518

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ +T+NVL+  FC+ G +D A +++E M  +GC PN+  Y TL++G  K+   +EA 
Sbjct: 519 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 578

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+   + +  + PD + Y+++I    R  RV+EA+++   +++ G +   V +N IL  L
Sbjct: 579 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 638

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           C+    + A+     +  +G   N+ +Y  ++     +  L++  +LLR +  RG L
Sbjct: 639 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 256/561 (45%), Gaps = 75/561 (13%)

Query: 2   NSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTP--KADPPVETSDTCVDARKRSRF 59
            ++R +L   C    FS+ S     +S  E +++     K D  V+       +R R R 
Sbjct: 13  GTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRL 72

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK----FEAVD 115
           I      S++   K+    L++   + E KG  HN  T + +++   R +K    F A+ 
Sbjct: 73  IDFSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131

Query: 116 AVLRQMTYETCKFHEGIFLNLM----KHFSNCSLHERVLEMFHKIHPITRE--------- 162
            +++ + YE         +N +    +      L +R++EM HK   IT           
Sbjct: 132 KIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190

Query: 163 ------------------KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
                             +P+       L ++ +S Q  LA   L+   +  ++K +   
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER-KIKLDAVK 249

Query: 205 FNILIKHHCKRGTLESAFEVLKEM-----KKSQMSY------------------------ 235
           ++I+I   CK G+L++AF +  EM     K   + Y                        
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 236 -----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
                P+++ +S LID   K G+ REA EL +EM+ +  I PD +TY  LIDGFC+  ++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQL 368

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D+A  +++ M + GC PN+  +  L+NG+CK   + +  E+F +M    +  DT+ Y TL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I  FC  G+++ A EL +EM  R  + DIV++ I+L GLC  G+ E+AL + EK+    +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
            L+   Y I+++  C   +++ A +L   +  +G  P   T N ++  LCK G   +A +
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 471 ALFGLVEMGFKPESDSWALLV 491
               + E G  P   ++ +L+
Sbjct: 549 LFRKMEEDGHSPNGCTYNILI 569



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 225/438 (51%), Gaps = 12/438 (2%)

Query: 76  QCALEIFNTVSEQKG-FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
            C   +F++VS+ KG  ++     + I+D     K+ +AVD + ++MT    +     F 
Sbjct: 22  SCYGRVFSSVSDGKGKVSYRERLRSGIVD----IKEDDAVD-LFQEMTRSRPRPRLIDFS 76

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            L    +    ++ VL++  ++  +     +L  +S  +N      ++ LA + +    +
Sbjct: 77  RLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK 135

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGR 253
            L  +P+T  F+ LI   C  G +  A E++  M   +M + P LIT + L++GLC NG+
Sbjct: 136 -LGYEPDTVTFSTLINGLCLEGRVSEALELVDRM--VEMGHKPTLITLNALVNGLCLNGK 192

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+ L + MV +    P+ +TY  ++   C+ G+   A +++  M+      +   Y+
Sbjct: 193 VSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            +++G CK+G L  A  +F+EM+    K D I YTTLI  FC AGR D+  +LL++M +R
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
               D+V F+ ++    +EGK+ EA  + +++   GI  +  +Y  +++  C++ +L+KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             +L LM+ +G  P+  T N L+   CKA + +D       +   G   ++ ++  L++ 
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 494 ICRGRKLLFAFELLDELV 511
            C   KL  A EL  E+V
Sbjct: 432 FCELGKLEVAKELFQEMV 449



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 199/409 (48%), Gaps = 4/409 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF  N  TY  +L  + +  +      +LR+M     K     +  ++         +
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
               +F+++  I   K  +   +T +     + + D     L+   +  ++ P+   F+ 
Sbjct: 265 NAFNLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSA 322

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI    K G L  A E+ KEM +  +S P+ +TY++LIDG CK  +  +A  + + MVSK
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGIS-PDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               P+  T+N+LI+G+C+   +D   ++   M   G   +   Y TL+ GFC+ GKL+ 
Sbjct: 382 G-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AKE+F EM +  ++PD + Y  L++  C  G  ++ALE+ +++++   + DI  +NII+ 
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C   K+++A  +   L   G+  +  +Y I++   C+KG L +A  L R M   G  P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           +  T N L+      G A  +A  +  +   GF  ++ +    +  + R
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 7/339 (2%)

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           E + VDL Q   +      R +P    F+ L     +    +   ++ K+M+   +++ N
Sbjct: 53  EDDAVDLFQEMTRS-----RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-N 106

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           L T S +I+  C+  +   A     +++ K    PD +T++ LI+G C  G+V  A +++
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKII-KLGYEPDTVTFSTLINGLCLEGRVSEALELV 165

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   G  P +     L+NG C  GK+ +A  + D M     +P+ + Y  ++   C++
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G+   A+ELL++M+ER  K D V ++II+ GLC++G ++ A  +  ++   G   +   Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++   C  G  +   +LLR M+ R   P     + L+    K G   +A      +++
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
            G  P++ ++  L++  C+  +L  A  +LD +V K  G
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 180/384 (46%), Gaps = 42/384 (10%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G + +  TY +++D   +  + +  + +L  M  + C  +   F  L+  +   +L +
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404

Query: 148 RVLEMFHKIHPITREKPSLKAI---STCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
             LE+F K+        SL+ +   +   N LI+      ++++A+   +      R++P
Sbjct: 405 DGLELFRKM--------SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRP 455

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   + IL+   C  G  E A E+ ++++KS+M   ++  Y+ +I G+C   +  +A +L
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL-DIGIYNIIIHGMCNASKVDDAWDL 514

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F  +  K  + PD  TYN++I G C+ G +  A  +   M+ +G +PN   Y  L+    
Sbjct: 515 FCSLPLKG-VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573

Query: 321 KEGKLQEAKEVFDEMKN-----------FLL-----------KPDTIGYTTLINCFC--R 356
            EG   ++ ++ +E+K            F L           +PD   +TTL+  FC   
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEE 633

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
              V +A  L K MK  G K ++VT+N ++ GL     I +  G+L++++  G   N  +
Sbjct: 634 NASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVT 693

Query: 417 YRIVLNFSCQKGELEKAIELLRLM 440
               ++  C++     AI LLR M
Sbjct: 694 KSTFISGLCKQDLHGSAILLLRKM 717


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 179/304 (58%), Gaps = 7/304 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK---RGTLE 219
           +P++   +  +N L ++ +++ A++ ++   +     PN   +N LI  +CK    G + 
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVME-DMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  VLKEM ++++S PNL T++ LIDG  K+     ++++F+EM+ +D ++P+ +TYN 
Sbjct: 279 KADAVLKEMVENEVS-PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQD-VIPNVITYNS 336

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI+G C GGK++ A  + + M + G  PN+  Y +L+NGFCK G ++EA ++FD +K   
Sbjct: 337 LINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
            +P T  Y  LI+ +C+ G++D+   L +EM+  G   D+ T+N ++ GLCR G IE A 
Sbjct: 397 TRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            + ++L   G+  +  ++ I++   C +GE  KA  LL+ M   G  P + T N ++   
Sbjct: 457 KLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGY 515

Query: 460 CKAG 463
           CK G
Sbjct: 516 CKEG 519



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 151/277 (54%), Gaps = 4/277 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI   C  G +  A  +  +M  + +  PNLITY +LI+G CKNG  +EA++
Sbjct: 329 PNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ-PNLITYHSLINGFCKNGMMKEALD 387

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+  V      P    YN+LID +C+ GK+D    + E M+  G  P+V  Y  L+ G 
Sbjct: 388 MFDS-VKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G ++ AK++FD++ N  L PD + +  L+  +C  G   +A  LLKEM + G K   
Sbjct: 447 CRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRH 505

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDG-IYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +T+NI++ G C+EG ++ A  M  ++  +  + +N ASY ++L    QKG+LE A  LL 
Sbjct: 506 LTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLN 565

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            ML +G +P+  T   +   +   G   D    LF +
Sbjct: 566 EMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHLFNV 602



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 168/317 (52%), Gaps = 7/317 (2%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIE 259
           N+ I ++L+  +      E  FE  K  +     Y  + ++   L+  L K  R  +   
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFK--RSGYYGYKLSAMSCKPLMVALLKQNRSADVEY 209

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L++EM+ + +I P+  T+NV+I+  C+ GK+++A+ +ME MK  G +PNV +Y TL++G+
Sbjct: 210 LYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGY 268

Query: 320 CK---EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           CK    GK+ +A  V  EM    + P+   +  LI+ F +   +  +L++ KEM ++   
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVI 328

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +++T+N ++ GLC  GKI EA+GM +K+   G+  N  +Y  ++N  C+ G +++A+++
Sbjct: 329 PNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDM 388

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +  +G  P     N L+   CK G  +D       +   G  P+  ++  L+  +CR
Sbjct: 389 FDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 497 GRKLLFAFELLDELVIK 513
              +  A +L D+L  K
Sbjct: 449 NGNIEAAKKLFDQLTNK 465



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 158/288 (54%), Gaps = 6/288 (2%)

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
           KEM + ++  PN+ T++ +I+ LCK G+  +A ++ E+M       P+ ++YN LIDG+C
Sbjct: 212 KEMIRRKIQ-PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYS-PNVVSYNTLIDGYC 269

Query: 286 R---GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           +    GK+ +A  +++ M  N  +PN+  +  L++GF K+  L  + +VF EM +  + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + I Y +LIN  C  G+++EA+ +  +M   G + +++T++ ++ G C+ G ++EAL M 
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +   G       Y ++++  C+ G+++    L   M   G +P   T N L+  LC+ 
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G  E AA  LF  +     P+  ++ +L+E  C   +   A  LL E+
Sbjct: 450 GNIE-AAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEM 496



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 173/343 (50%), Gaps = 9/343 (2%)

Query: 90  GFNHNNATYATILD---KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           G++ N  +Y T++D   KL    K    DAVL++M       +   F  L+  F      
Sbjct: 253 GYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNL 312

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              L++F ++       P++   ++ +N L    +++ A   ++       ++PN   ++
Sbjct: 313 PGSLKVFKEMLD-QDVIPNVITYNSLINGLCNGGKINEAIG-MRDKMVSAGVQPNLITYH 370

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   CK G ++ A ++   +K  Q + P    Y+ LID  CK G+  +   L EEM  
Sbjct: 371 SLINGFCKNGMMKEALDMFDSVK-GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM-E 428

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           ++ I+PD  TYN LI G CR G ++ AKK+ + + N G  P++  +  LM G+C  G+ +
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESR 487

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERGCKADIVTFNII 385
           +A  +  EM    LKP  + Y  ++  +C+ G +  A  +  +M KER  + ++ ++N++
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           L G  ++GK+E+A  +L ++   G+  N+ +Y IV      KG
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 120/205 (58%), Gaps = 4/205 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P T ++N+LI  +CK G ++  F + +EM++  +  P++ TY+ LI GLC+NG    A 
Sbjct: 398 RPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI-VPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF+++ +K   LPD +T+++L++G+C  G+  +A  +++ M   G  P    Y  +M G
Sbjct: 457 KLFDQLTNKG--LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKG 514

Query: 319 FCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           +CKEG L+ A  +  +M K   L+ +   Y  L+  + + G++++A  LL EM E+G   
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574

Query: 378 DIVTFNIILGGLCREGKIEEALGML 402
           + +T+ I+   +  +G + +  G L
Sbjct: 575 NRITYEIVKEEMVDKGFVPDIEGHL 599



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/325 (19%), Positives = 158/325 (48%), Gaps = 11/325 (3%)

Query: 198 LKPNTCI--FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L P+ C+  +  L+K+     +LE  F++L  +  ++  Y  + ++   +DG  +NG   
Sbjct: 79  LNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLANAK-RYSKIRSF---LDGFVRNGSDH 134

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +   +F  +   D +  +++  ++L+  +    + +   +  +     G   +  +   L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPL 194

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M    K+ +  + + ++ EM    ++P+   +  +IN  C+ G++++A +++++MK  G 
Sbjct: 195 MVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGY 254

Query: 376 KADIVTFNIILGGLCR---EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
             ++V++N ++ G C+    GK+ +A  +L+++  + +  N  ++ I+++   +   L  
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPG 314

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           ++++ + ML +  +P+  T N L+  LC  G   +A      +V  G +P   ++  L+ 
Sbjct: 315 SLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLIN 374

Query: 493 LICRGRKLLFAFELLDELVIKESGT 517
             C+   +  A ++ D   +K  GT
Sbjct: 375 GFCKNGMMKEALDMFDS--VKGQGT 397



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 5/245 (2%)

Query: 36  NTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNN 95
           N  K +  +   D  V A  +   I++ + I+        + AL++F++V  Q G     
Sbjct: 343 NGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQ-GTRPTT 401

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
             Y  ++D   +  K +   A+  +M  E      G +  L+         E   ++F +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +    +  P L      +       +   A   LK  ++ + LKP    +NI++K +CK 
Sbjct: 462 L--TNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSK-MGLKPRHLTYNIMMKGYCKE 518

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G L++A  +  +M+K +    N+ +Y+ L+ G  + G+  +A  L  EM+ K  ++P+ +
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG-LVPNRI 577

Query: 276 TYNVL 280
           TY ++
Sbjct: 578 TYEIV 582


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 217/417 (52%), Gaps = 8/417 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS-NCSLHERVLEM 152
           N  T   ++    +  +F+ VDAV+ +M  + C F + +  N+M          E  + +
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEME-KRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213

Query: 153 FHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
              +  +++  KP +   ++ L  L  S   D A    K  +    + P+   F ILI  
Sbjct: 214 VDSM--VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD-FGVAPDVRSFTILIGG 270

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C+ G +E A ++ KEM+   +  P+L+++S LI    + G+   A+    EM     ++
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIK-PDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG-LV 328

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD + Y ++I GFCR G +  A ++ + M   GC P+V  Y TL+NG CKE +L +A+ +
Sbjct: 329 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            +EM+   + PD   +TTLI+ +C  G++D+AL+L   M  +  + DIVT+N ++ G+CR
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 448

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +G +++A  + + +    I+ N  +Y I+++  C+KG++E A   L  M+ +G LP+  T
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            N ++   C++G        L  ++     P+  ++  L+    +  K+  AF+LL+
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 565



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 224/470 (47%), Gaps = 20/470 (4%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +  VDAR R+                + + A+ + +++   KG      TY ++
Sbjct: 189 PDVVTHNVMVDARFRA---------------GDAEAAMALVDSMV-SKGLKPGIVTYNSV 232

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           L  L R   ++    V ++M           F  L+  F      E  L+++ ++     
Sbjct: 233 LKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH-RG 291

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
            KP L + S  + L     ++D A  +L+   +   L P+  I+ ++I   C+ G +  A
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLR-EMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 350

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             V  EM       P+++TY+TL++GLCK  R  +A  L  EM  +  + PD  T+  LI
Sbjct: 351 LRVRDEMVGCG-CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG-VPPDLCTFTTLI 408

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G+C  GK+D+A ++ + M N    P++  Y TL++G C++G L +A +++D+M +  + 
Sbjct: 409 HGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIF 468

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ + Y+ LI+  C  G+V++A   L EM  +G   +I+T+N I+ G CR G + +    
Sbjct: 469 PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKF 528

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L+K+  + +  +  +Y  +++   ++ ++  A +LL +M      P   T N L+     
Sbjct: 529 LQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 588

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G  ++A      +   G +P+  ++  ++           AF+L DE++
Sbjct: 589 HGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 638



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 175/317 (55%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP    +N ++K  C+ G  + A+EV KEM    ++ P++ +++ LI G C+ G   EA
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA-PDVRSFTILIGGFCRVGEIEEA 280

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +++++EM  +  I PD ++++ LI  F R GK+D A   +  M+  G  P+   YT ++ 
Sbjct: 281 LKIYKEMRHRG-IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIG 339

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC+ G + +A  V DEM      PD + Y TL+N  C+  R+ +A  LL EM+ERG   
Sbjct: 340 GFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP 399

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ TF  ++ G C EGK+++AL + + +    +  +  +Y  +++  C++G+L+KA +L 
Sbjct: 400 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 459

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  R   P++ T + L+   C+ G  EDA   L  ++  G  P   ++  +++  CR 
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519

Query: 498 RKLLFAFELLDELVIKE 514
             +    + L ++++ +
Sbjct: 520 GNVSKGQKFLQKMMVNK 536



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 183/348 (52%), Gaps = 37/348 (10%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT   NI++ ++CK    +    V+ EM+K +  +P+++T++ ++D   + G    A+ L
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEK-RCVFPDVVTHNVMVDARFRAGDAEAAMAL 213

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            + MVSK  + P  +TYN ++ G CR G  D+A ++ + M + G  P+V ++T L+ GFC
Sbjct: 214 VDSMVSKG-LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 321 KEGKLQEAKEVFDEMKN-----------------------------------FLLKPDTI 345
           + G+++EA +++ EM++                                   F L PD +
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YT +I  FCRAG + +AL +  EM   GC  D+VT+N +L GLC+E ++ +A G+L ++
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+  +  ++  +++  C +G+L+KA++L   ML +   P   T N L+  +C+ G  
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           + A      +      P   ++++L++  C   ++  AF  LDE++ K
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 195/377 (51%), Gaps = 19/377 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL+I+  +   +G   +  +++ ++   AR  K +   A LR+M          I+  ++
Sbjct: 280 ALKIYKEM-RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 338

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK-------PSLKAISTCLNLLIESNQVDLAQNFLK 190
             F    L    L +        R++       P +   +T LN L +  ++  A+  L 
Sbjct: 339 GGFCRAGLMSDALRV--------RDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 390

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
              +   + P+ C F  LI  +C  G L+ A ++   M   ++  P+++TY+TLIDG+C+
Sbjct: 391 EMRER-GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR-PDIVTYNTLIDGMCR 448

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G   +A +L+++M S+ +I P+ +TY++LID  C  G+V+ A   ++ M N G  PN+ 
Sbjct: 449 QGDLDKANDLWDDMHSR-EIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 507

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y +++ G+C+ G + + ++   +M    + PD I Y TLI+ + +  ++ +A +LL  M
Sbjct: 508 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 567

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           ++   + D+VT+N+++ G    G ++EA  + EK+   GI  ++ +Y  ++N     G  
Sbjct: 568 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 627

Query: 431 EKAIELLRLMLCRGFLP 447
           ++A +L   ML RGF P
Sbjct: 628 KEAFQLHDEMLQRGFAP 644



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 146/281 (51%), Gaps = 1/281 (0%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S  S  N  T + ++   CK   F +   +  EM  K  + PD +T+NV++D   R G  
Sbjct: 149 SSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAGDA 207

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           + A  +++ M + G  P +  Y +++ G C+ G   +A EVF EM +F + PD   +T L
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I  FCR G ++EAL++ KEM+ RG K D+V+F+ ++G   R GK++ A+  L ++   G+
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 327

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +   Y +V+   C+ G +  A+ +   M+  G LP   T N LL  LCK     DA  
Sbjct: 328 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 387

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L  + E G  P+  ++  L+   C   KL  A +L D ++
Sbjct: 388 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 36/310 (11%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    +  LI    ++ + REA E F  ++     +P A +  +L     R G    A  
Sbjct: 84  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA-LSRAGWPHLAAD 142

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
               + ++    N +    +++ +CK  +  +   V  EM+   + PD + +  +++   
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIIL----------------------------- 386
           RAG  + A+ L+  M  +G K  IVT+N +L                             
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 387 ------GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
                 GG CR G+IEEAL + +++ + GI  +  S+  ++    ++G+++ A+  LR M
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
            C G +P       ++   C+AG+  DA      +V  G  P+  ++  L+  +C+ R+L
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382

Query: 501 LFAFELLDEL 510
           L A  LL+E+
Sbjct: 383 LDAEGLLNEM 392


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 218/460 (47%), Gaps = 41/460 (8%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            + ++  +  +   L++  +  K++     L+ M     K    +   L+K F N    E
Sbjct: 70  DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIE 129

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +++   +      KP + A +  ++   ++++VD A   L    +    +P+   +NI
Sbjct: 130 KAIQVMEILE--KHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKR-GFEPDVVTYNI 186

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI + C RG L+ A  V+ ++ K     P +ITY+ LI+     G   EA++L +EM+S+
Sbjct: 187 LIGNFCGRGRLDLALRVMDQLLKDNCK-PTVITYTILIEATITQGGIDEAMKLLDEMLSR 245

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRA---------------------------------- 293
             + PD  TYNV+++G C+ G +DRA                                  
Sbjct: 246 -GLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEY 304

Query: 294 -KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            +K+M  M   GC PN   Y+TL+   C++GK+ EAK V   MK   L PD   Y  LI+
Sbjct: 305 GEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLIS 364

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             CR G+VD A+E L +M   G   DI+++N IL  LC+ G  +EAL + EKL   G   
Sbjct: 365 ALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPP 424

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N  SY  +       G+  +A+ ++  ML  G  P   T N L+  LC+ G+ + A   L
Sbjct: 425 NAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELL 484

Query: 473 FGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             + E    +P   S+  ++  +C+ ++++ A E+L  +V
Sbjct: 485 VDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMV 524



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 38/237 (16%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   ++ LI   C+ G ++ A  VLK MK+  ++ P+  +Y  LI  LC+ G+   AI
Sbjct: 318 EPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALA-PDGYSYDPLISALCREGKVDLAI 376

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E  ++M+S    LPD L+YN ++   C+ G  D A  I E +   GC PN  +Y TL   
Sbjct: 377 EFLDDMISGGH-LPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGA 435

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG-------------------- 358
               G    A  +  EM +  + PD I Y +LI+C CR G                    
Sbjct: 436 LWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQP 495

Query: 359 ----------------RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
                           R+ +A+E+L  M   GC  +  T+ +++ G+   G   +A+
Sbjct: 496 TVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAM 552



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 39/240 (16%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P+    ST +  L    ++D A+N LK   +   L P+   ++ LI   C+ G ++ A 
Sbjct: 318 EPNPITYSTLITALCRDGKIDEAKNVLKVMKEK-ALAPDGYSYDPLISALCREGKVDLAI 376

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE-------------------- 262
           E L +M  S    P++++Y++++  LCKNG   EA+ +FE                    
Sbjct: 377 EFLDDMI-SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGA 435

Query: 263 ---------------EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCN 306
                          EM+S + I PD +TYN LI   CR G VD+A +++ +  ++  C 
Sbjct: 436 LWSSGDKIRALGMILEMLS-NGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQ 494

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P V +Y T++ G CK  ++ +A EV   M N    P+   YT LI     AG   +A+EL
Sbjct: 495 PTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 7/257 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  TY+T++  L R  K +    VL+ M  +        +  L+         + 
Sbjct: 315 KGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDL 374

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
            +E    +       P + + ++ L  L ++   D A N  +   + +   PN   +N L
Sbjct: 375 AIEFLDDMIS-GGHLPDILSYNSILASLCKNGNADEALNIFEKLGE-VGCPPNAGSYNTL 432

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
                  G    A  ++ EM  + +  P+ ITY++LI  LC++G   +AIEL  +M   +
Sbjct: 433 FGALWSSGDKIRALGMILEMLSNGID-PDEITYNSLISCLCRDGLVDQAIELLVDMFESE 491

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
           +  P  ++YN ++ G C+  ++  A +++  M N GC PN   YT L+ G    G   +A
Sbjct: 492 KCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDA 551

Query: 329 KEVFDEMKNFLLKPDTI 345
                E+ N L+  D I
Sbjct: 552 M----ELANLLVNMDAI 564


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 229/449 (51%), Gaps = 9/449 (2%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++++ + + + AL  F     Q  ++H+   Y T+LD L++ K  +    VLR MT    
Sbjct: 172 AVLRSQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGI 231

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
           +     F  +M  +S        L +   +     E PSL   +T + +L++  +++ A 
Sbjct: 232 ECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVE-PSLSICNTTIYVLVKGGKLEKAL 290

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            FL+   Q   +KP+   +N LIK +C    +E A E++  +  S+   P+ ++Y T++ 
Sbjct: 291 KFLE-RMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGL-PSKGCPPDKVSYYTVMG 348

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
            LCK  +  E   L E+MV    ++PD +TYN LI    + G  D A   ++  ++ G +
Sbjct: 349 FLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFH 408

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +   Y+ +++ FC++G++ EAK +  +M +    PD + YT +++ FCR GR+DEA ++
Sbjct: 409 IDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKI 468

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGML---EKLWYDGIYLNKASYRIVLNF 423
           L++M + GCK + V++  +L GLC  GK  EA  M+   E+ W+     N  +Y  V++ 
Sbjct: 469 LQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTP---NAITYGAVMHG 525

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             ++G+L +A +L R M+ +GF P     N L+  LC+     +A   L   +  G    
Sbjct: 526 LRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAIN 585

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVI 512
             ++  ++   C+   +  A  +LD++ +
Sbjct: 586 VVNFTTVIHGFCQIGDMEAALSVLDDMYL 614



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 208/431 (48%), Gaps = 3/431 (0%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           T+ ++ G   + +   T +  L +  K E     L +M     K     + +L+K + + 
Sbjct: 259 TLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDL 318

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  E  LE+   + P     P   +  T +  L +  +++  +  ++    +  L P+  
Sbjct: 319 NRIEDALELIAGL-PSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQV 377

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N LI    K G  + A   LKE +     + + + YS ++   C+ GR  EA  L  +
Sbjct: 378 TYNTLIHMLSKHGHADDALAFLKEAQDKGF-HIDKVGYSAIVHSFCQKGRMDEAKSLVID 436

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M S+    PD +TY  ++DGFCR G++D AKKI++ M  +GC PN  +YT L+NG C  G
Sbjct: 437 MYSRG-CNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSG 495

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K  EA+E+ +  +     P+ I Y  +++   R G++ EA +L +EM E+G     V  N
Sbjct: 496 KSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEIN 555

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++  LC+  K+ EA   LE+    G  +N  ++  V++  CQ G++E A+ +L  M   
Sbjct: 556 LLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLS 615

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T   L   L K G  ++AA  +  ++  G  P   ++  ++    +  ++   
Sbjct: 616 GKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDM 675

Query: 504 FELLDELVIKE 514
             LL++++ ++
Sbjct: 676 LNLLEKMLKRQ 686



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 153/351 (43%), Gaps = 36/351 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +  ++      ++D A+  L+   +H   KPNT  +  L+   C  G    A E
Sbjct: 444 PDVVTYTAIVDGFCRLGRIDEAKKILQQMYKH-GCKPNTVSYTALLNGLCHSGKSLEARE 502

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++  + +     PN ITY  ++ GL + G+  EA +L  EMV K    P  +  N+LI  
Sbjct: 503 MI-NVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKG-FFPTPVEINLLIQS 560

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  KV  AKK +E   N GC  NV N+TT+++GFC+ G ++ A  V D+M      PD
Sbjct: 561 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF--------------------- 382
            + YT L +   + GR+DEA EL+ +M  +G     VT+                     
Sbjct: 621 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLE 680

Query: 383 ------------NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
                       N ++  LC  G +EEA  +L K+      ++  +  +++    +KG  
Sbjct: 681 KMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVA 740

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
             A ++   M  R   P      ++  +L   G   +A   +   VE G +
Sbjct: 741 ISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQ 791



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 133/355 (37%), Gaps = 70/355 (19%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G N +  TY  I+D   R  + +    +L+QM    CK +   +  L+    +      
Sbjct: 440 RGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 499

Query: 149 VLEMFHK----------------IHPITREK------------------PSLKAISTCLN 174
             EM +                 +H + RE                   P+   I+  + 
Sbjct: 500 AREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ 559

Query: 175 LLIESNQVDLAQNFLKYS-NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
            L ++ +V  A+ +L+   N+   +  N   F  +I   C+ G +E+A  VL +M  S  
Sbjct: 560 SLCQNQKVVEAKKYLEECLNKGCAI--NVVNFTTVIHGFCQIGDMEAALSVLDDMYLSG- 616

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQIL 271
            +P+ +TY+ L D L K GR  EA EL  +M+SK                      D +L
Sbjct: 617 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDML 676

Query: 272 ----------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
                     P    YN +I+  C  G ++ A+K++  +       +      LM  + K
Sbjct: 677 NLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLK 736

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G    A +V   M    L PD      +       G++ EA  L+    ERG +
Sbjct: 737 KGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQ 791


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 213/427 (49%), Gaps = 13/427 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   +  TY +++D      +++ V  +L +M  E     +  F  L+          
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK---EG 279

Query: 148 RVLEMFHKIHPITR--EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTC 203
           R+LE    +  +++  EKP +   +  +        V  A+      N+ ++  L+P+  
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF---NRMVKRGLEPDVL 336

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N+LI  +CK   ++ A  + KE+    +  P + +Y++LIDGLC +GR     +L +E
Sbjct: 337 NYNVLIDGYCKTKMVDEAMVLFKELCNKNL-VPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M    Q  PD +TYN+LID  C+ G++  A  ++  M   G  PN+  Y  +M+G+C   
Sbjct: 396 MHGSAQP-PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +  AK++F+ M    L+PD + Y  LIN +C+   VDEA+ L KEM+ +    DI ++N
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYN 514

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC  G+I     +L+++   G   +  +Y I+L+  C+    +KAI L R  +  
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR-QIVE 573

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P + T++ ++  LCK    + A  AL  L+  G  P   ++ +L+  +C+      A
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA 633

Query: 504 FELLDEL 510
             LL ++
Sbjct: 634 MLLLSKM 640



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 210/425 (49%), Gaps = 8/425 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G+  +  TY T+++ L++  + +A   +L++M   + + +  ++  L+           
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFN 206
            L +  +I     E+  L    T  +L+     V   Q   +   + +R  + P+   FN
Sbjct: 214 ALGLCSQIG----ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ILI   CK G +  A  VL  M K +   P+++TY+ L++G C      EA ELF  MV 
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSK-RGEKPDIVTYNALMEGYCSRENVHEARELFNRMV- 327

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + PD L YNVLIDG+C+   VD A  + + + N    P + +Y +L++G C  G++ 
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
             K++ DEM      PD + Y  LI+  C+ GR+ EAL +L  M ++G K +IVT+N ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C    +  A  +  ++   G+  +  +Y +++N  C+   +++AI L + M  +  +
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLI 507

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P  A+ N L+  LC  G        L  + + G  P+  ++ +L++  C+ +    A  L
Sbjct: 508 PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL 567

Query: 507 LDELV 511
             ++V
Sbjct: 568 FRQIV 572



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 37/317 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++ + ++ ++ L  S ++   +  L   +   +  P+   +NILI   CK G +  A  
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ-PPDVVTYNILIDALCKEGRILEALG 426

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VL  M K  +  PN++TY+ ++DG C       A ++F  MV K  + PD L YNVLI+G
Sbjct: 427 VLVMMMKKGVK-PNIVTYNAMMDGYCLRNNVNVAKDIFNRMV-KSGLEPDILNYNVLING 484

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+   VD A  + + M++    P++ +Y +L++G C  G++   +E+ DEM +    PD
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPD 544

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKE------------------------------- 372
            I Y  L++ FC+    D+A+ L +++ E                               
Sbjct: 545 VITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKH 604

Query: 373 ---RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
               GC  ++ T+ I++  LC++G   EA+ +L K+  +    +  ++ I++    Q+ E
Sbjct: 605 LLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664

Query: 430 LEKAIELLRLMLCRGFL 446
            +KA +L   M+ RG +
Sbjct: 665 TDKAEKLREEMIARGLV 681



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 159/311 (51%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P T +F+ L+    + G   +A  +  +++   +S P++ T++ LI+          A  
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS-PSIATFTILINCYFHQSHTAFAFS 111

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   ++ K    P+ +T+N +I+GFC  G + +A    + +   G   + F Y TL+NG 
Sbjct: 112 LLATIL-KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGL 170

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K G+++ A  +  EM+   ++P+ + Y+ LI+  C+ G V +AL L  ++ ERG   D 
Sbjct: 171 SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA 230

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++ G C  G+ +E   +L K+  + +  +  ++ I+++  C++G + +A  +L +
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  RG  P   T N L+   C      +A      +V+ G +P+  ++ +L++  C+ + 
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 500 LLFAFELLDEL 510
           +  A  L  EL
Sbjct: 351 VDEAMVLFKEL 361



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 166/323 (51%), Gaps = 21/323 (6%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
           A+Y +++D L    +   V  +L +M + + +  + +  N++          R+LE    
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEM-HGSAQPPDVVTYNIL--IDALCKEGRILEALGV 427

Query: 156 IHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKH 211
           +  + ++  KP++   +  ++     N V++A++     N+ ++  L+P+   +N+LI  
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF---NRMVKSGLEPDILNYNVLING 484

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
           +CK   ++ A  + KEM+   +  P++ +Y++LIDGLC  GR     EL +EM    Q  
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNL-IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS- 542

Query: 272 PDALTYNVLIDGFCRGGKVDRA----KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           PD +TYN+L+D FC+    D+A    ++I+E     G  P+ +    +++  CK  KL+ 
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIVE-----GIWPDFYTNHAIVDNLCKGEKLKM 597

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A++    +      P+   YT LIN  C+ G   EA+ LL +M++     D +TF II+G
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657

Query: 388 GLCREGKIEEALGMLEKLWYDGI 410
            L +  + ++A  + E++   G+
Sbjct: 658 VLLQRNETDKAEKLREEMIARGL 680



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%)

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           CR   VD A      M      P    +  L+    + G    A  +F ++++  + P  
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             +T LINC+        A  LL  + + G + ++VTFN I+ G C  G I +AL   + 
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           L   G   ++ +Y  ++N   + G+++ A+ LL+ M      P+    + L+  LCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             DA      + E G   ++ ++  L++  C   +     +LL ++V
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 203/410 (49%), Gaps = 4/410 (0%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G + +  T + ++D  +  ++ +   +V  +M     +     F  L+         
Sbjct: 122 ELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKF 181

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            + +E F      +  +P++   +T +N L +  +   A    K   +    +PN   +N
Sbjct: 182 AQAVEFFDDFEA-SGCQPTVYTYTTIINGLCKIGETTAAAGLFK-KMEEAGCQPNVVTYN 239

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ILI   CK   +  A ++   MK  ++S P++ TY++LI GLC   R++EA  L  EM S
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRIS-PDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            + I+P+  T+NVL+D  C+ GKV  A+ + + M   G  P+V  Y++LM G+    ++ 
Sbjct: 299 LN-IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIV 357

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA+++FD M     KPD   Y  LI  +C+A R+DEA +L  EM  +G   D V +N ++
Sbjct: 358 EARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLI 417

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+ G++ EA  + + +  +G   +  +Y ++L+  C++G L KA  L R+M      
Sbjct: 418 HGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLK 477

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           P  A  N L+  +CK G  +DA      L   G  P    +  ++  +C+
Sbjct: 478 PDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCK 527



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 38/409 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E F+   E  G      TY TI++ L +  +  A   + ++M    C+ +   +  L+
Sbjct: 184 AVEFFDDF-EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILI 242

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  L    L++F  +    R  P +   ++ +  L    +   A   L      L 
Sbjct: 243 DSLCKDKLVNEALDIFSYMKA-KRISPDIFTYNSLIQGLCNFRRWKEASALLN-EMTSLN 300

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK----------SQMSY------------ 235
           + PN   FN+L+   CK G +  A  V K M +          S + Y            
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEAR 360

Query: 236 ------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                       P+  +Y+ LI G CK  R  EA +LF EM+ +  + PD + YN LI G
Sbjct: 361 KLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG-LTPDNVNYNTLIHG 419

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G++  A+ + + M +NG  P++F Y+ L++GFCKEG L +A  +F  M++  LKPD
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y  LI+  C+ G + +A +L  E+  +G   ++  +  I+  LC+EG ++EAL    
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
            +  DG   ++ SY +++    Q  +  +A +L+  M  RGF+    T+
Sbjct: 540 NMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTT 588



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 140/278 (50%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +I ++ L+  + K G++  A+    + +    + PD  T ++LID F    +VD A  
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M   G  P+   + TL+NG CK GK  +A E FD+ +    +P    YTT+IN  C
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G    A  L K+M+E GC+ ++VT+NI++  LC++  + EAL +   +    I  +  
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  ++   C     ++A  LL  M     +P+  T N L+  +CK G   +A      +
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            EMG +P+  +++ L+       +++ A +L D ++ K
Sbjct: 332 TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369


>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
 gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 221/431 (51%), Gaps = 14/431 (3%)

Query: 72  EKEPQCALEIFNTVSE----QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           +  P  AL  FN  S        ++HN+  Y  I+D L  +  F     +L +       
Sbjct: 71  QPNPYQALFFFNWASNLNPNPNNYSHNHRCYVAIIDLLLSHSLFPIAKNLLEKHG----T 126

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
           F + +   L++ +      +  +  FHK+  I + K  L + +  L +L++ NQ+++A++
Sbjct: 127 FSDLLVSKLIRAYGYSGDTKSAIFWFHKVKEIQQGK-CLFSWNAILGVLVKVNQINVAKS 185

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           F         +KP+   +  +I+  CK G +++A +V  EM    +  PNLIT +TLI+G
Sbjct: 186 FFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEM----ICEPNLITCNTLING 241

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            CK G    A      M+     LPD +TY+ LIDG+C+ G+++ A+K M+ M   GCNP
Sbjct: 242 YCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNP 301

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N++ Y  ++ G C  G + EA+ +  +M+   +K +   + +++     AG+ +EA+   
Sbjct: 302 NLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYF 361

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM  +G K D     +++   C+  K +EA+ +L+++   GI  +  S+  VL    + 
Sbjct: 362 SEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEI 421

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA-GMAEDAAIALFGLVEMGFKPESDS 486
           GEL+KA+ LL+ +   G LP+  + + ++  LC++ G  ++ A  +  +++ GF+ ++  
Sbjct: 422 GELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMDATL 481

Query: 487 WALLVELICRG 497
           ++ LV   C  
Sbjct: 482 YSCLVGGFCEA 492



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 164/333 (49%), Gaps = 18/333 (5%)

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           +L  N   YS+ H   +    I ++L+ H        S F + K + +   ++ +L+  S
Sbjct: 86  NLNPNPNNYSHNH---RCYVAIIDLLLSH--------SLFPIAKNLLEKHGTFSDLLV-S 133

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            LI     +G  + AI  F + V + Q      ++N ++    +  +++ AK   + + N
Sbjct: 134 KLIRAYGYSGDTKSAIFWFHK-VKEIQQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVN 192

Query: 303 NGC-NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           +    P+   YTT++ GFCK G +  A++VFDEM   + +P+ I   TLIN +C+ G ++
Sbjct: 193 DAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEM---ICEPNLITCNTLINGYCKKGDME 249

Query: 362 EA-LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            A + L + M+ + C  D VT++ ++ G C++G++ EA   ++ +   G   N  +Y  +
Sbjct: 250 NARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAI 309

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +   C +G +++A  LL  M   G   + AT   +L  L  AG +E+A      ++  G 
Sbjct: 310 IYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGM 369

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           K ++    +++   C+ RK   A  LL E+  K
Sbjct: 370 KLDAKEHEVVITAYCKMRKPDEAISLLKEMQAK 402



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 38/264 (14%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I   C RG ++ A  +L +M+ + +   N+ T+ +++ GL   G+  EAI 
Sbjct: 301 PNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVK-ENVATHLSILKGLSVAGKSEEAIG 359

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRG-------------------------------- 287
            F EM+ K   L DA  + V+I  +C+                                 
Sbjct: 360 YFSEMIRKGMKL-DAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRIL 418

Query: 288 ---GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK-EGKLQEAKEVFDEMKNFLLKPD 343
              G++D+A  +++ +KN GC PN+ +Y+T++ G C+  G++QE   + D+M     + D
Sbjct: 419 VEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMD 478

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y+ L+  FC AG  + A+    +   +    ++ +F+  +  +C +GK+ EA  + +
Sbjct: 479 ATLYSCLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIFK 538

Query: 404 KLWYDGIYLNKASYRIVLNFSCQK 427
            +      ++  SY+ VL+    K
Sbjct: 539 DMCRRCSLVDVDSYQRVLDDQLHK 562



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 13/252 (5%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G N N  TY  I+  L      +    +L +M     K +    L+++K  S     E 
Sbjct: 297 RGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEE 356

Query: 149 VL----EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            +    EM  K   +  ++  +   + C     +  + D A + LK   Q   +  +   
Sbjct: 357 AIGYFSEMIRKGMKLDAKEHEVVITAYC-----KMRKPDEAISLLK-EMQAKGISRSVGS 410

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK-NGRFREAIELFEE 263
           FN +++   + G L+ A  +LK++K +    PNL++YST+I GLC+ +GR +E   L ++
Sbjct: 411 FNAVLRILVEIGELDKAVLLLKQVK-NMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDD 469

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ +D    DA  Y+ L+ GFC  G  + A +      N     N+ +++  +N  C +G
Sbjct: 470 ML-QDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKG 528

Query: 324 KLQEAKEVFDEM 335
           K+ EA+++F +M
Sbjct: 529 KVIEAEQIFKDM 540


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 232/461 (50%), Gaps = 3/461 (0%)

Query: 52  DARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF 111
           D R+  R +      ++++ + + + AL+ F     Q  + H+   Y  +L  L++ K  
Sbjct: 93  DLRRLLRSLKPRQVCAVLQLQSDERIALDFFYWAGRQWRYRHDPIVYYMMLQVLSKTKLC 152

Query: 112 EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST 171
           +    VLR M           F ++M  +S        +++   +     E P+L   +T
Sbjct: 153 QGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVE-PNLLICNT 211

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
            +++L+ +N+++ A  FL+   Q + + PN   +N LIK +C    +E A E++ EM   
Sbjct: 212 AIHVLVMANKLEKALRFLE-RMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMP-F 269

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           +   P+ ++Y T++  LC++ R +E   L E+MV  +++ PD +TYN L+    + G  D
Sbjct: 270 KGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHAD 329

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A + +   +  G   +   Y+ ++N FC +G++  AKE+ +EM      PD + YT ++
Sbjct: 330 EALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVV 389

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+ G+V+EA ++L++M + GCK + V++  +L GLC+ G   EA  M+     D   
Sbjct: 390 NGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWT 449

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y +V++   ++G+L +A +++R ML +GF P     N L+  LC      +A   
Sbjct: 450 PNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKF 509

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           +   +  G    + ++  ++   C+   +  A  LLD++ +
Sbjct: 510 MEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYL 550



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 189/376 (50%), Gaps = 3/376 (0%)

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+K + +    E  +E+  ++ P     P   +  T +  L +  ++   +N ++   + 
Sbjct: 247 LIKGYCDLYQVEHAMELIAEM-PFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKD 305

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            +L P+   +N L+    K G  + A E L+E ++      + + YS +++  C  GR  
Sbjct: 306 NKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQV-DKVGYSAIVNSFCMQGRMD 364

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A E+  EM++K    PD +TY  +++G C+ GKV+ AKK+++ M  +GC PN  +YT L
Sbjct: 365 RAKEIVNEMITKG-CSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTAL 423

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG C+ G   EA+E+ +  +     P+ I Y+ +++   R G++ EA ++++EM  +G 
Sbjct: 424 LNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGF 483

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
               V  N+++  LC E K+ EA   +E+    G  +N  ++  V++  CQ   ++ A+ 
Sbjct: 484 FPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALS 543

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M      P   T   ++  L K G  E+A +    +++ G  P   ++  ++   C
Sbjct: 544 LLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYC 603

Query: 496 RGRKLLFAFELLDELV 511
           +  ++    +LL +++
Sbjct: 604 KMGRVEELIKLLGKML 619



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 196/422 (46%), Gaps = 41/422 (9%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY  ++       + E    ++ +M ++ C   +  +  +M         + V
Sbjct: 236 GITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEV 295

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
             +  K+    +  P     +T +++L +    D A  FL+ + +    + +   ++ ++
Sbjct: 296 RNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEER-GFQVDKVGYSAIV 354

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C +G ++ A E++ EM     S P+++TY+ +++GLCK G+  EA ++ ++M  K  
Sbjct: 355 NSFCMQGRMDRAKEIVNEMITKGCS-PDVVTYTAVVNGLCKVGKVEEAKKMLQQMY-KHG 412

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ ++Y  L++G C+ G    A+++M   + +   PN   Y+ +M+G  +EGKL EA 
Sbjct: 413 CKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEAC 472

Query: 330 EVFDEM--KNFLLKP---------------------------------DTIGYTTLINCF 354
           +V  EM  K F   P                                 + + +TT+I+ F
Sbjct: 473 DVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGF 532

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C++  +D AL LL +M       D VTF  I+  L ++G+IEEA     K+   G+    
Sbjct: 533 CQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTP 592

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +YR V++  C+ G +E+ I+LL  ML R         N+++ +LC  G  E AA  + G
Sbjct: 593 VTYRAVIHQYCKMGRVEELIKLLGKMLSRS--KCRTAYNQVIEKLCNFGNPE-AADKVVG 649

Query: 475 LV 476
           LV
Sbjct: 650 LV 651



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 171/310 (55%), Gaps = 3/310 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F  ++  + + G L +A +VL  M+K+ +  PNL+  +T I  L    +  +A+   E M
Sbjct: 174 FAHVMVSYSRAGKLRNAMQVLTMMQKAGVE-PNLLICNTAIHVLVMANKLEKALRFLERM 232

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
                I P+ +TYN LI G+C   +V+ A +++  M   GC P+  +Y T+M   C++ +
Sbjct: 233 -QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKR 291

Query: 325 LQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++E + + ++M K+  L PD + Y TL++   + G  DEALE L+E +ERG + D V ++
Sbjct: 292 IKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYS 351

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            I+   C +G+++ A  ++ ++   G   +  +Y  V+N  C+ G++E+A ++L+ M   
Sbjct: 352 AIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKH 411

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P+  +   LL  LC+ G + +A   +    E  + P + ++++++  + R  KL  A
Sbjct: 412 GCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEA 471

Query: 504 FELLDELVIK 513
            +++ E++ K
Sbjct: 472 CDVVREMLTK 481


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 222/438 (50%), Gaps = 18/438 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E  N +S   GF  +  +Y T+L  L   K++E V+ +  +M  + C  +E  F  L+
Sbjct: 234 AREFLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSN 193
           + F    + ER +++  ++           A +T  N++I +     +VD A  FL    
Sbjct: 293 RFFCRGGMVERAIQVLEQM-----SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMG 347

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            +    P+T  +  ++K  C+    E A E+LKEM +     PN +T++T I  LC+ G 
Sbjct: 348 SY-GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP-PNEVTFNTFICILCQKGL 405

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A  L E+M S+     + +TYN L++GFC  G+VD A   +E   +  C PN   YT
Sbjct: 406 IEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYT 461

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+ G C   +L  A E+  EM      P+ + +  L++ FC+ G +DEA+EL+++M E 
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  +++T+N +L G+ ++   EEAL +L  L  +G+  +  +Y  ++    ++  +E+A
Sbjct: 522 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVE 492
           I++  ++   G  P     N++L+ LCK     D AI  F  +V  G  P   ++  L+E
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKR-CNTDGAIDFFAYMVSNGCMPNELTYITLIE 640

Query: 493 LICRGRKLLFAFELLDEL 510
            +     L    +LL EL
Sbjct: 641 GLANEDFLKETRDLLREL 658



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 219/430 (50%), Gaps = 18/430 (4%)

Query: 86  SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF-HEGIFLNLMKHFSNCS 144
           +E+ G   +   Y T++    RY + +A   ++  M      + +  I   L        
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PN 201
               + +M H+       +PS+   +  L  + +S     A   L      +R K   PN
Sbjct: 164 ALSLLDDMLHRGC-----QPSVVTYTVLLEAVCKSTGFGQAMEVL----DEMRAKGCTPN 214

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N++I   C+ G ++ A E L  +       P+ ++Y+T++ GLC   R+ +  ELF
Sbjct: 215 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQ-PDTVSYTTVLKGLCAAKRWEDVEELF 273

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            EM+ K+  +P+ +T+++L+  FCRGG V+RA +++E M  +GC  N      ++N  CK
Sbjct: 274 AEMMEKN-CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G++ +A +  + M ++   PDTI YTT++   CRA R ++A ELLKEM  + C  + VT
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           FN  +  LC++G IE+A  ++E++   G  +N  +Y  ++N  C +G ++ A+EL   M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 452

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
           C+   P+  T   LL  LC A   + AA  L  +++    P   ++ +LV   C+   + 
Sbjct: 453 CK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 502 FAFELLDELV 511
            A EL+++++
Sbjct: 510 EAIELVEQMM 519



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 162/314 (51%), Gaps = 5/314 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LI++ C+RG    A  VL+  ++S  +  ++  Y+TL+ G C+ G+   A  
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV-DVFAYNTLVAGYCRYGQLDAARR 134

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M     + PDA TY  +I G C  G+V  A  +++ M + GC P+V  YT L+   
Sbjct: 135 LIASM----PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK     +A EV DEM+     P+ + Y  +IN  CR GRVD+A E L  +   G + D 
Sbjct: 191 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 250

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++  +L GLC   + E+   +  ++       N+ ++ +++ F C+ G +E+AI++L  
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G   +    N ++  +CK G  +DA   L  +   G  P++ S+  +++ +CR  +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370

Query: 500 LLFAFELLDELVIK 513
              A ELL E+V K
Sbjct: 371 WEDAKELLKEMVRK 384



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 172/357 (48%), Gaps = 42/357 (11%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +  +Y T+L  L R +++E    +L++M  + C  +E  F                
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF---------------- 393

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
                               +T + +L +   ++ A   ++  ++H   + N   +N L+
Sbjct: 394 --------------------NTFICILCQKGLIEQATMLIEQMSEH-GCEVNIVTYNALV 432

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C +G ++SA E+   M       PN ITY+TL+ GLC   R   A EL  EM+ KD 
Sbjct: 433 NGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD- 487

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ +T+NVL+  FC+ G +D A +++E M  +GC PN+  Y TL++G  K+   +EA 
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 547

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+   + +  + PD + Y+++I    R  RV+EA+++   +++ G +   V +N IL  L
Sbjct: 548 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           C+    + A+     +  +G   N+ +Y  ++     +  L++  +LLR +  RG L
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 3/221 (1%)

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A ++++   + G  P+V+  T L+   C+ G+  +A  V    +      D   Y TL+ 
Sbjct: 62  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            +CR G++D A  L+  M       D  T+  I+ GLC  G++ EAL +L+ + + G   
Sbjct: 122 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 178

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y ++L   C+     +A+E+L  M  +G  P+  T N ++  +C+ G  +DA   L
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             L   GF+P++ S+  +++ +C  ++     EL  E++ K
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 219/430 (50%), Gaps = 18/430 (4%)

Query: 86  SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF-HEGIFLNLMKHFSNCS 144
           +E+ G   +   Y T++    RY + +A   ++  M      + +  I   L        
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PN 201
               + +M H+       +PS+   +  L  + +S     A   L      +R K   PN
Sbjct: 164 ALSLLDDMLHRGC-----QPSVVTYTVLLEAVCKSTGFGQAMEVL----DEMRAKGCTPN 214

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N++I   C+ G ++ A E L  +       P+ ++Y+T++ GLC   R+ +  ELF
Sbjct: 215 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQ-PDTVSYTTVLKGLCAAKRWEDVEELF 273

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            EM+ K+  +P+ +T+++L+  FCRGG V+RA +++E M  +GC  N      ++N  CK
Sbjct: 274 AEMMEKN-CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G++ +A +  + M ++   PDTI YTT++   CRA R ++A ELLKEM  + C  + VT
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           FN  +  LC++G IE+A  ++E++   G  +N  +Y  ++N  C +G ++ A+EL   M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP 452

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
           C+   P+  T   LL  LC A   + AA  L  +++    P   ++ +LV   C+   + 
Sbjct: 453 CK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 502 FAFELLDELV 511
            A EL+++++
Sbjct: 510 EAIELVEQMM 519



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 221/438 (50%), Gaps = 18/438 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E  N +S   GF  +  +Y T+L  L   K++E V+ +  +M  + C  +E  F  L+
Sbjct: 234 AREFLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSN 193
           + F    + ER +++  ++           A +T  N++I +     +VD A  FL    
Sbjct: 293 RFFCRGGMVERAIQVLEQM-----SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMG 347

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            +    P+T  +  ++K  C+    E A E+LKEM +     PN +T++T I  LC+ G 
Sbjct: 348 SY-GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP-PNEVTFNTFICILCQKGL 405

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A  L E+M S+     + +TYN L++GFC  G+VD A   +E   +  C PN   YT
Sbjct: 406 IEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYT 461

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+ G C   +L  A E+  EM      P+ + +  L++ FC+ G +DEA+EL+++M E 
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  +++T+N +L G+  +   EEAL +L  L  +G+  +  +Y  ++    ++  +E+A
Sbjct: 522 GCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVE 492
           I++  ++   G  P     N++L+ LCK     D AI  F  +V  G  P   ++  L+E
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKR-CNTDGAIDFFAYMVSNGCMPNELTYITLIE 640

Query: 493 LICRGRKLLFAFELLDEL 510
            +     L    +LL EL
Sbjct: 641 GLANEDFLKETRDLLREL 658



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 162/314 (51%), Gaps = 5/314 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LI++ C+RG    A  VL+  ++S  +  ++  Y+TL+ G C+ G+   A  
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV-DVFAYNTLVAGYCRYGQLDAARR 134

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M     + PDA TY  +I G C  G+V  A  +++ M + GC P+V  YT L+   
Sbjct: 135 LIASM----PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK     +A EV DEM+     P+ + Y  +IN  CR GRVD+A E L  +   G + D 
Sbjct: 191 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 250

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++  +L GLC   + E+   +  ++       N+ ++ +++ F C+ G +E+AI++L  
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G   +    N ++  +CK G  +DA   L  +   G  P++ S+  +++ +CR  +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370

Query: 500 LLFAFELLDELVIK 513
              A ELL E+V K
Sbjct: 371 WEDAKELLKEMVRK 384



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 171/357 (47%), Gaps = 42/357 (11%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +  +Y T+L  L R +++E    +L++M  + C  +E  F                
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF---------------- 393

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
                               +T + +L +   ++ A   ++  ++H   + N   +N L+
Sbjct: 394 --------------------NTFICILCQKGLIEQATMLIEQMSEH-GCEVNIVTYNALV 432

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C +G ++SA E+   M       PN ITY+TL+ GLC   R   A EL  EM+ KD 
Sbjct: 433 NGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD- 487

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ +T+NVL+  FC+ G +D A +++E M  +GC PN+  Y TL++G   +   +EA 
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEAL 547

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+   + +  + PD + Y+++I    R  RV+EA+++   +++ G +   V +N IL  L
Sbjct: 548 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           C+    + A+     +  +G   N+ +Y  ++     +  L++  +LLR +  RG L
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 3/221 (1%)

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A ++++   + G  P+V+  T L+   C+ G+  +A  V    +      D   Y TL+ 
Sbjct: 62  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            +CR G++D A  L+  M       D  T+  I+ GLC  G++ EAL +L+ + + G   
Sbjct: 122 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 178

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y ++L   C+     +A+E+L  M  +G  P+  T N ++  +C+ G  +DA   L
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             L   GF+P++ S+  +++ +C  ++     EL  E++ K
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 237/485 (48%), Gaps = 44/485 (9%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKL-------------------- 105
           ++ ++ + +P+ AL + N+   ++ F  ++A Y  I+ KL                    
Sbjct: 60  LAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREG 119

Query: 106 ---------------ARYKKFE-AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
                          AR ++F+ AVD VL Q+  +T        +    H  N  +    
Sbjct: 120 HQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVV--FNHLLNVLVEGSK 177

Query: 150 LEMFHKIH-PITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           L++   ++  +T    +P +  ++T +  L  ++QV  A   L+  + H  + P+   F 
Sbjct: 178 LKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH-GVAPDETTFT 236

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L++   + G++E+A  V  +M ++  S P  +T + LI+G CK GR  +A+   ++ ++
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCS-PTGVTVNVLINGYCKMGRVEDALGYIQQEIA 295

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            D   PD +TYN  + G C+ G V  A K+M+ M   G +P+VF Y T++N   K G+L 
Sbjct: 296 -DGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 354

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EAK + ++M +    PDT  + TLI       R++EAL+L +E+  +G   D+ TFNI++
Sbjct: 355 EAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILI 414

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC+ G     + + E++   G   ++ +Y I+++  C  G+L  A++LL  M   G  
Sbjct: 415 NALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCP 474

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
               T N ++  LCK    E+A      +   G    + ++  L++ +C+ +++  A EL
Sbjct: 475 RSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATEL 534

Query: 507 LDELV 511
           ++++V
Sbjct: 535 IEQMV 539



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 197/353 (55%), Gaps = 8/353 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESA 221
           P +   +T +N L ++ ++D A+  +   NQ +     P+T  FN LI     +  LE A
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIV---NQMVDRGCLPDTTTFNTLIVALSSQNRLEEA 391

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++ +E+    +S P++ T++ LI+ LCK G     I LFEEM S     PD +TYN+LI
Sbjct: 392 LDLARELTVKGLS-PDVYTFNILINALCKVGDPHLGIRLFEEMKSSG-CTPDEVTYNILI 449

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C  GK+  A  ++  M++NGC  +   Y T+++  CK+ +++EA+EVFD+M    + 
Sbjct: 450 DHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGIS 509

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
              + + TLI+  C+A R+D+A EL+++M + G + + +T+N IL   C++G I++A  +
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADI 569

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LE +  +G  ++  +Y  ++N  C+ G  + A++LLR M  +G  P     N ++  L +
Sbjct: 570 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 629

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GRKLLFAFELLDELVIK 513
                DA      + E+G  P++ ++ ++   +CR G  +  AF+ L E+V K
Sbjct: 630 RNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNK 682



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 158/316 (50%), Gaps = 3/316 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P++ ++  +++     G  +    +++EM++       ++  S  ++   +  RF +A++
Sbjct: 87  PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRS-FVESYARLRRFDDAVD 145

Query: 260 LFEEMVSKDQ--ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           L    +  D   +  D + +N L++    G K+   + +   M   G  P+V    TL+ 
Sbjct: 146 LVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIK 205

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C+  +++ A  + +EM +  + PD   +TTL+  F   G ++ AL +  +M E GC  
Sbjct: 206 ALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSP 265

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
             VT N+++ G C+ G++E+ALG +++   DG   ++ +Y   ++  CQ G +  A++++
Sbjct: 266 TGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM 325

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            LML  G  P   T N ++  L K G  ++A   +  +V+ G  P++ ++  L+  +   
Sbjct: 326 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQ 385

Query: 498 RKLLFAFELLDELVIK 513
            +L  A +L  EL +K
Sbjct: 386 NRLEEALDLARELTVK 401


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 187/350 (53%), Gaps = 4/350 (1%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F +L+  F + +  E  L +F +I  +   +P++   +T ++ L ++  ++ A       
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIVGMG-FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
             +  ++PN   +N L+   C+ G    A  +L++M K  +  PN+IT++ LID   K G
Sbjct: 214 GDN-GIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQ-PNVITFTALIDAFVKVG 271

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EA EL++ M+    + PD  TY  LI+G C  G++D A+++   M++NG  PN   Y
Sbjct: 272 KIMEAKELYKVMIQMS-VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTY 330

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TTL++GFCK  ++++  ++F EM    L  +TI YT LI  +C  GR D A E+  +M  
Sbjct: 331 TTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGS 390

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           R    DI T+N++L GLC  G +E+AL + + +    + +N  +Y I++   C+ G++E 
Sbjct: 391 RRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVED 450

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           A +L   +  +G  P+  T   ++   C+ G   +A      + E GF P
Sbjct: 451 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLP 500



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 179/336 (53%), Gaps = 7/336 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--HLRLKPNTCIFNILIKHHCKRGTLES 220
           +P L   ++ L+     N+++ A   L   +Q   +  +PN   +  LI   CK   L  
Sbjct: 149 EPDLVTFTSLLHGFCHWNRIEDA---LALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNH 205

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+  +M  + +  PN++TY++L+ GLC+ GR+ +A  L  +M+ K  I P+ +T+  L
Sbjct: 206 AVEIFNQMGDNGIR-PNVVTYNSLVSGLCEIGRWSDAAWLLRDMM-KRGIQPNVITFTAL 263

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           ID F + GK+  AK++ + M      P+VF YT L+NG C  G+L EA+++F  M++   
Sbjct: 264 IDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGY 323

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P+ + YTTLI+ FC++ RV++  ++  EM ++G  A+ +T+ +++ G C  G+ + A  
Sbjct: 324 YPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQE 383

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +  ++       +  +Y ++L+  C  G +EKA+ + + M  R    +  T   ++  +C
Sbjct: 384 VFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMC 443

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           K G  EDA      L   G KP   ++  ++   CR
Sbjct: 444 KVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 479



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 186/379 (49%), Gaps = 6/379 (1%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C     C    F     + GF  +  T+ ++L     + + E   A+  Q+     + + 
Sbjct: 128 CRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNV 187

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
             +  L+            +E+F+++      +P++   ++ ++ L E  +   A   L+
Sbjct: 188 VTYTTLIHCLCKNRHLNHAVEIFNQMGD-NGIRPNVVTYNSLVSGLCEIGRWSDAAWLLR 246

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-YPNLITYSTLIDGLC 249
                  ++PN   F  LI    K G +  A E+ K M   QMS YP++ TY+ LI+GLC
Sbjct: 247 -DMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVM--IQMSVYPDVFTYTALINGLC 303

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
             GR  EA ++F  M S +   P+ +TY  LI GFC+  +V+   KI   M   G   N 
Sbjct: 304 TYGRLDEARQMFYLMES-NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             YT L+ G+C  G+   A+EVF++M +    PD   Y  L++  C  G V++AL + K 
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M++R    +IVT+ II+ G+C+ GK+E+A  +   L+  G+  N  +Y  +++  C++G 
Sbjct: 423 MRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGF 482

Query: 430 LEKAIELLRLMLCRGFLPH 448
           + +A  L + M   GFLP+
Sbjct: 483 IHEADALFKKMKEDGFLPN 501



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 171/368 (46%), Gaps = 40/368 (10%)

Query: 48  DTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
           D  V    R   +++   I  +   +    A+EIFN + +  G   N  TY +++  L  
Sbjct: 176 DQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDN-GIRPNVVTYNSLVSGLCE 234

Query: 108 YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK 167
             ++     +LR M         GI                              +P++ 
Sbjct: 235 IGRWSDAAWLLRDM------MKRGI------------------------------QPNVI 258

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
             +  ++  ++  ++  A+   K   Q + + P+   +  LI   C  G L+ A ++   
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQ-MSVYPDVFTYTALINGLCTYGRLDEARQMFYL 317

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M+ S   YPN +TY+TLI G CK+ R  +  ++F EM S+  ++ + +TY VLI G+C  
Sbjct: 318 ME-SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEM-SQKGLVANTITYTVLIQGYCLV 375

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G+ D A+++   M +    P++  Y  L++G C  G +++A  +F  M+   +  + + Y
Sbjct: 376 GRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTY 435

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T +I   C+ G+V++A +L   +  +G K +++T+  ++ G CR G I EA  + +K+  
Sbjct: 436 TIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495

Query: 408 DGIYLNKA 415
           DG   N++
Sbjct: 496 DGFLPNES 503



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 150/283 (53%), Gaps = 8/283 (2%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL---PDALTY 277
           A ++   M  S+   P+++ ++ L+  + K  RF   I LFE+M    QIL   P   T 
Sbjct: 66  ALDLFTRMVHSR-PLPSIVDFTRLLSVIAKMKRFDVVISLFEQM----QILGISPVLYTC 120

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N++++  CR  +  RA   +  M   G  P++  +T+L++GFC   ++++A  +FD++  
Sbjct: 121 NIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVG 180

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +P+ + YTTLI+C C+   ++ A+E+  +M + G + ++VT+N ++ GLC  G+  +
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD 240

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L  +   GI  N  ++  +++   + G++ +A EL ++M+     P   T   L+ 
Sbjct: 241 AAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALIN 300

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
            LC  G  ++A    + +   G+ P   ++  L+   C+ +++
Sbjct: 301 GLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRV 343



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 160/316 (50%), Gaps = 2/316 (0%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H R  P+   F  L+    K    +    + ++M+   +S P L T + +++ +C++ + 
Sbjct: 75  HSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGIS-PVLYTCNIVMNCVCRSSQP 133

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A     +M+ K    PD +T+  L+ GFC   +++ A  + + +   G  PNV  YTT
Sbjct: 134 CRASCFLGKMM-KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTT 192

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++  CK   L  A E+F++M +  ++P+ + Y +L++  C  GR  +A  LL++M +RG
Sbjct: 193 LIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRG 252

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + +++TF  ++    + GKI EA  + + +    +Y +  +Y  ++N  C  G L++A 
Sbjct: 253 IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEAR 312

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++  LM   G+ P+  T   L+   CK+   ED     + + + G    + ++ +L++  
Sbjct: 313 QMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGY 372

Query: 495 CRGRKLLFAFELLDEL 510
           C   +   A E+ +++
Sbjct: 373 CLVGRPDVAQEVFNQM 388



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 103/205 (50%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ ++T L++   K  +      +F++M+   + P       ++NC CR+ +   A   
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M + G + D+VTF  +L G C   +IE+AL + +++   G   N  +Y  +++  C+
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
              L  A+E+   M   G  P+  T N L+  LC+ G   DAA  L  +++ G +P   +
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           +  L++   +  K++ A EL   ++
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMI 284



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 2/151 (1%)

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           +EAL+L   M        IV F  +L  + +  + +  + + E++   GI     +  IV
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMG 479
           +N  C+  +  +A   L  M+  GF P   T   LL   C     EDA +ALF  +V MG
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA-LALFDQIVGMG 182

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
           F+P   ++  L+  +C+ R L  A E+ +++
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 235/446 (52%), Gaps = 13/446 (2%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           +++ + AL  F        + H+++ Y  +L+ L++ K  +    +LR MT    +    
Sbjct: 223 QEDERNALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPE 282

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            F  +M  +S        +++   +     E P+L   +T +++L+  N++  A   L++
Sbjct: 283 AFGFVMVSYSRAGRLRDAMKVLTLMQKAGVE-PNLSICNTAIHILVMGNELKKA---LRF 338

Query: 192 SNQH--LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           + +   + + PN   +N LIK +C    ++ A E++ +M     S P+ ++Y T++  LC
Sbjct: 339 AERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCS-PDKVSYYTVMGLLC 397

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           ++ R  E  EL ++M +  ++LPD +TYN LI    + G  D A +I++  +      + 
Sbjct: 398 RDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDK 457

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y+ +++ +CKEGK+Q+AKE+  EM +    PD + YT++++ FCR G++D+A +++++
Sbjct: 458 VEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQ 517

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEA---LGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           M +  CK + VT+   L GLCR GK  EA   + M E+ W+     N  +Y +V++   +
Sbjct: 518 MYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTP---NAITYSVVVHGLRR 574

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           +G+L +A +++R M+ +GF P+    N L+  LC+ G   +A   L   +  G      +
Sbjct: 575 EGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVN 634

Query: 487 WALLVELICRGRKLLFAFELLDELVI 512
           +  ++   C+   L  A  LLD++ +
Sbjct: 635 FTTVIHGFCQKDDLEAALSLLDDMYL 660



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 191/364 (52%), Gaps = 4/364 (1%)

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+K + N    ++ +E+  ++ P     P   +  T + LL    +++  +  +K     
Sbjct: 357 LIKGYCNVHQVDQAMELIDQM-PSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTD 415

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            +L P+   +N LI+   K G  + A E+L+E +K +    + + YS ++   CK G+ +
Sbjct: 416 SKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKV-DKVEYSAIVHAYCKEGKIQ 474

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A EL  EM SK    PD +TY  ++DGFCR GK+D+AKK+M+ M  + C PN   YTT 
Sbjct: 475 KAKELVSEMFSKG-CDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTF 533

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG C+ GK  EA+++ +  +     P+ I Y+ +++   R G+++EA ++++EM  +G 
Sbjct: 534 LNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGF 593

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             + V  N+++  LCR+GK  EA  +L++    G  +N  ++  V++  CQK +LE A+ 
Sbjct: 594 FPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALS 653

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M      P   T   L+  L K    E+A      ++  G  P   ++  ++   C
Sbjct: 654 LLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYC 713

Query: 496 R-GR 498
           R GR
Sbjct: 714 RKGR 717



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/472 (22%), Positives = 199/472 (42%), Gaps = 76/472 (16%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN-L 136
           A+E+ + +   KG + +  +Y T++  L R K+   +  ++++M  ++    + +  N L
Sbjct: 370 AMELIDQMP-SKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSL 428

Query: 137 MKHFSNCSLHERVLEMFHK----------------IHPITRE------------------ 162
           ++  S     +  LE+  +                +H   +E                  
Sbjct: 429 IQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGC 488

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
            P +   ++ L+      ++D A+  ++   +H   KPN   +   +   C+ G    + 
Sbjct: 489 DPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH-HCKPNAVTYTTFLNGLCRNG---KSL 544

Query: 223 EVLKEMKKSQMSY--PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           E  K M  S+  +  PN ITYS ++ GL + G+  EA ++  EM+ K    P+ +  N+L
Sbjct: 545 EARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKG-FFPNPVEINLL 603

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           +   CR GK   A ++++   N GC  NV N+TT+++GFC++  L+ A  + D+M     
Sbjct: 604 VHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNK 663

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF------------------ 382
            PDT+ YT LI+   +  R++EA EL  +M  +G     VT+                  
Sbjct: 664 HPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLK 723

Query: 383 ---------------NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
                          N+++  LC+ G +EEA  +L ++       +  +  +++      
Sbjct: 724 LLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNV 783

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           G    A ++   M  R  +P      ++  RL   G  E+A   +   VE G
Sbjct: 784 GIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERG 835



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 174/346 (50%), Gaps = 6/346 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL  +  C  LL + ++ + A  F  ++++  R + ++ ++ ++++   K    + A  +
Sbjct: 210 SLNPLQVCAVLLSQEDERN-ALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRI 268

Query: 225 LKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           L+ M + ++   P    +  ++    + GR R+A+++   ++ K  + P+    N  I  
Sbjct: 269 LRLMTRRRIQLCPE--AFGFVMVSYSRAGRLRDAMKVLT-LMQKAGVEPNLSICNTAIHI 325

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
              G ++ +A +  E M   G  PNV  Y  L+ G+C   ++ +A E+ D+M +    PD
Sbjct: 326 LVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPD 385

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMK-ERGCKADIVTFNIILGGLCREGKIEEALGML 402
            + Y T++   CR  R++E  EL+K+M+ +     D VT+N ++  L + G  +EAL +L
Sbjct: 386 KVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEIL 445

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           ++       ++K  Y  +++  C++G+++KA EL+  M  +G  P   T   +L   C+ 
Sbjct: 446 QEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRI 505

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
           G  + A   +  + +   KP + ++   +  +CR  K L A ++++
Sbjct: 506 GKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMN 551


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 212/430 (49%), Gaps = 15/430 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET--CKFHEGIFLNLMKHFSNCSL 145
           Q G   +  TY T+LD   R  + +    +LR+M      C   +  +  ++   +    
Sbjct: 224 QLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGE 283

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPN 201
            E+  ++      + R + S KA +   N LI        V+ A   L+   ++  + P 
Sbjct: 284 LEKAAQL------VDRMRMSKKASAFTFNPLITGYFARGSVEKA-GALQLEMENEGIVPT 336

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N +I    + G +E+A     EM+   +  P+LITY++LI+G CK G  +EA+ LF
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGL-LPDLITYNSLINGYCKAGNLKEALWLF 395

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            ++  +  + P  LTYN+L+DG+CR G ++ A++  + M   GC P+V  YT LMNG  K
Sbjct: 396 GDL-KRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
              L   +E FDEM +  L+PD   Y T I+     G   EA +L + M  RG  +D VT
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +NI L GLC+ G +++A  +  K+  DG+  +  +Y  +++  C++G L +A ++   ML
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P   T    +   C+ G    A      ++E G +P   ++ +L+  +CR  +  
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634

Query: 502 FAFELLDELV 511
            A++   E++
Sbjct: 635 LAYQHFHEML 644



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 178/355 (50%), Gaps = 12/355 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI-----FNILIKHHCKRGT 217
           +PS+   +T L+      +VD A   L+     +  +P  C+     +N++I    ++G 
Sbjct: 228 EPSIVTYNTLLDSFFREGRVDQAAKLLR----EMEARPGGCLPSDVTYNVVINGLARKGE 283

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           LE A +++  M+ S+ +  +  T++ LI G    G   +A  L  EM   + I+P  +TY
Sbjct: 284 LEKAAQLVDRMRMSKKA--SAFTFNPLITGYFARGSVEKAGALQLEM-ENEGIVPTVVTY 340

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N +I G  R G V+ A+     M+  G  P++  Y +L+NG+CK G L+EA  +F ++K 
Sbjct: 341 NTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKR 400

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             L P  + Y  L++ +CR G ++EA    +EM E+GC+ D+ T+ I++ G  +   +  
Sbjct: 401 AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAM 460

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
                +++   G+  +  +Y   ++     G   +A +L  +M+ RG      T N  L 
Sbjct: 461 VREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLD 520

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
            LCK+G  +DA +    +V  G +P+  ++  L+   C   +L  A ++ D +++
Sbjct: 521 GLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLV 575



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 142/293 (48%), Gaps = 35/293 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +NIL+  +C+ G LE A    +EM + Q   P++ TY+ L++G  K       
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVE-QGCQPDVSTYTILMNGSRKVRNLAMV 461

Query: 258 IELFEEMVSKD----------------------------------QILPDALTYNVLIDG 283
            E F+EM+SK                                    I  D +TYN+ +DG
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G +  A  +   M ++G  P+   YT L++  C+ G+L+EA+++FD M    L P 
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + YT  I+ +CR G +  A    ++M E G + + VT+N+++  LCR G+   A     
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFH 641

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           ++   G+  NK +Y ++++ +C++G  E+AI L   M   G  P + T N L 
Sbjct: 642 EMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 169/356 (47%), Gaps = 40/356 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSN-QHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P++   +T ++ +  S  V+ A+  +K+   + + L P+   +N LI  +CK G L+ A 
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAAR--MKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEAL 392

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNG------RFREAI------------------ 258
            +  ++K++ ++ P+++TY+ L+DG C+ G      RF++ +                  
Sbjct: 393 WLFGDLKRAGLA-PSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNG 451

Query: 259 -----------ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
                      E F+EM+SK  + PD   YN  I      G    A ++ E M + G + 
Sbjct: 452 SRKVRNLAMVREFFDEMLSKG-LQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISS 510

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y   ++G CK G L++A  ++ +M +  L+PD I YT LI+  C  GR+ EA ++ 
Sbjct: 511 DTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIF 570

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M   G     VT+ + +   CR G +  A G  +K+  +G+  N+ +Y ++++  C+ 
Sbjct: 571 DGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           G    A +    ML RG  P+  T   L+   CK G  E+A      + + G  P+
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 4/272 (1%)

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM--K 301
           ++  L    R+ +   ++ EM+    I P  +TYN L+D F R G+VD+A K++  M  +
Sbjct: 202 VLRALRDEARWDDMRSVYAEMLQLG-IEPSIVTYNTLLDSFFREGRVDQAAKLLREMEAR 260

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC P+   Y  ++NG  ++G+L++A ++ D M+    K     +  LI  +   G V+
Sbjct: 261 PGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVE 319

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           +A  L  EM+  G    +VT+N I+ G+ R G +E A     ++   G+  +  +Y  ++
Sbjct: 320 KAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLI 379

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N  C+ G L++A+ L   +   G  P   T N LL   C+ G  E+A      +VE G +
Sbjct: 380 NGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQ 439

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P+  ++ +L+    + R L    E  DE++ K
Sbjct: 440 PDVSTYTILMNGSRKVRNLAMVREFFDEMLSK 471



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 3/208 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +  +T  +NI +   CK G L+ A+ +  +M    +  P+ ITY+ LI   C+ GR REA
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQ-PDCITYTCLIHAHCERGRLREA 566

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F+ M+    + P A+TY V I  +CR G +  A    + M   G  PN   Y  L++
Sbjct: 567 RDIFDGMLVSG-LPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIH 625

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C+ G+   A + F EM    L P+   YT LI+  C+ G  +EA+ L  EM + G   
Sbjct: 626 ALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHP 685

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKL 405
           D  T N +  G   EG+ + A+  +E +
Sbjct: 686 DHCTHNALFKGF-DEGQSKHAIQYMENV 712



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 9/216 (4%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M ++G  P +     ++     E +  + + V+ EM    ++P  + Y TL++ F R GR
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246

Query: 360 VDEALELLKEMKER--GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS- 416
           VD+A +LL+EM+ R  GC    VT+N+++ GL R+G++E+A  +++++        KAS 
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMS----KKASA 302

Query: 417 --YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
             +  ++     +G +EKA  L   M   G +P   T N ++  + ++G  E A +    
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  MG  P+  ++  L+   C+   L  A  L  +L
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDL 398



 Score = 38.9 bits (89), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           L   +EM   G    I   N++L  L  E + ++   +  ++   GI  +  +Y  +L+ 
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 424 SCQKGELEKAIELLRLMLCR--GFLPHYATSNELLVRLCKAGMAEDAA 469
             ++G +++A +LLR M  R  G LP   T N ++  L + G  E AA
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 182/362 (50%), Gaps = 45/362 (12%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-------YPNLITYSTLIDG 247
            + ++PN   F ILI H CK   ++ A EVL++M   + S        P+++ Y+TLIDG
Sbjct: 333 EMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDG 392

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           LCK GR +E + L E M S+    PD +TYN LIDGFC+ G++++ K++ + M   G  P
Sbjct: 393 LCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAP 452

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           NV    TL+ G C+ G++  A   F E +   +K D + YT LIN FC     ++A+EL 
Sbjct: 453 NVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELF 512

Query: 368 KEMKERGC-----------------------------------KADIVTFNIILGGLCRE 392
            EM + GC                                   + D V +N ++GG CR 
Sbjct: 513 NEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRT 572

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
            K      ML+++   G+  +  +Y  ++ ++ + G+L+ A +++R M+  G +P  AT 
Sbjct: 573 NKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATY 632

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFK--PESDSWALLVELICRGRKLLFAFELLDEL 510
             ++   C  G   + A+ +F  ++   K  P +  + +L+  +C+  K+  A  L++++
Sbjct: 633 GAVINAYCLNGNGNE-AMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDM 691

Query: 511 VI 512
            I
Sbjct: 692 KI 693



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 174/371 (46%), Gaps = 6/371 (1%)

Query: 98  YATILDKLARY-KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           Y T++D L +  ++ E +  + R  + + C      +  L+  F      E+  E+F ++
Sbjct: 386 YNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEM 445

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
           +      P++  ++T +  +  + +V  A NF   + Q   +K +   +  LI   C   
Sbjct: 446 NK-EGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEA-QRRGMKGDAVTYTALINAFCNVN 503

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
             E A E+  EM KS  S P+ I Y TLI G  + GR  +A  +  E+  K  I PD + 
Sbjct: 504 NFEKAMELFNEMLKSGCS-PDAIVYYTLISGFSQAGRMADASFVLAEL-KKLGIRPDTVC 561

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN LI GFCR  K  R  ++++ M+  G  P+   Y TL+    K G L+ A++V  +M 
Sbjct: 562 YNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMI 621

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG-CKADIVTFNIILGGLCREGKI 395
              + P    Y  +IN +C  G  +EA+E+ K+MK       + V +NI++  LC+  K+
Sbjct: 622 KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKV 681

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           + A+ ++E +   G+  N  +Y  +      + +LEK  E +  M+     P Y T   L
Sbjct: 682 KSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEIL 741

Query: 456 LVRLCKAGMAE 466
              L   G  E
Sbjct: 742 TEWLSAVGEIE 752



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 155/335 (46%), Gaps = 31/335 (9%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY---PNLITYSTLIDGLCKNGRFREA 257
           NT + N+ +    + G ++ A +V+ EM +S       PN  T   L   L K  R    
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERN--- 245

Query: 258 IELFEEMVSKDQILPDALTYN---VLIDGF---------CRGGKVDRAKKIMEFMKNNGC 305
               EE++S+D+I+   L +    VLI  F         CR  K +R   +   M   G 
Sbjct: 246 ----EELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGA 301

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
                   +L+ G  +EG      E+ ++M    ++P+ + +  LIN  C+  RVD+ALE
Sbjct: 302 VLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALE 361

Query: 366 LLKEM---KERG-----CKADIVTFNIILGGLCREGKIEEALGMLEKLWYD-GIYLNKAS 416
           +L++M   KE G      + D+V +N ++ GLC+ G+ +E LG++E++    G   +  +
Sbjct: 362 VLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTIT 421

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C+ GE+EK  EL   M   G  P+  T N L+  +C+ G    A        
Sbjct: 422 YNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQ 481

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             G K ++ ++  L+   C       A EL +E++
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML 516



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 11/280 (3%)

Query: 86  SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           ++++G   +  TY  +++       FE    +  +M    C     ++  L+  FS    
Sbjct: 480 AQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAG- 538

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLI----ESNQVDLAQNFLKYSNQHLRLKPN 201
             R+ +    +  +  +K  ++  + C N LI     +N+       LK   +   LKP+
Sbjct: 539 --RMADASFVLAEL--KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLK-EMEEAGLKPD 593

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           T  +N LI +  K G L+ A +V+++M K+ +  P + TY  +I+  C NG   EA+E+F
Sbjct: 594 TITYNTLIAYASKNGDLKFAQKVMRKMIKAGV-VPTVATYGAVINAYCLNGNGNEAMEIF 652

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M +  ++ P+ + YN+LI+  C+  KV  A  +ME MK  G  PN   Y  +  G   
Sbjct: 653 KDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRD 712

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           E  L++  E  D M      PD I    L       G ++
Sbjct: 713 EKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 153/318 (48%), Gaps = 6/318 (1%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E+F+ ++++ G   N  T  T++  + R  +  +      +      K     +  L+  
Sbjct: 440 ELFDEMNKE-GVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINA 498

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
           F N +  E+ +E+F+++   +   P      T ++   ++ ++  A +F+    + L ++
Sbjct: 499 FCNVNNFEKAMELFNEMLK-SGCSPDAIVYYTLISGFSQAGRMADA-SFVLAELKKLGIR 556

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  +N LI   C+       FE+LKEM+++ +  P+ ITY+TLI    KNG  + A +
Sbjct: 557 PDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK-PDTITYNTLIAYASKNGDLKFAQK 615

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTTLMNG 318
           +  +M+ K  ++P   TY  +I+ +C  G  + A +I + MK  +   PN   Y  L+N 
Sbjct: 616 VMRKMI-KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINS 674

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK  K++ A  + ++MK + + P+T  Y  +         +++  E +  M E  C  D
Sbjct: 675 LCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPD 734

Query: 379 IVTFNIILGGLCREGKIE 396
            +T  I+   L   G+IE
Sbjct: 735 YITMEILTEWLSAVGEIE 752



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 20/261 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+FN +  + G + +   Y T++   ++  +      VL ++     +     +  L+
Sbjct: 508 AMELFNEML-KSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE--SNQVDLAQNFLKYSNQH 195
             F   +   RV EM  ++     E+  LK  +   N LI   S   DL     K++ + 
Sbjct: 567 GGFCRTNKFHRVFEMLKEM-----EEAGLKPDTITYNTLIAYASKNGDL-----KFAQKV 616

Query: 196 LR------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           +R      + P    +  +I  +C  G    A E+ K+MK +    PN + Y+ LI+ LC
Sbjct: 617 MRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLC 676

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           KN + + A+ L E+M     + P+  TYN +  G      +++  + M+ M  + CNP+ 
Sbjct: 677 KNNKVKSAVSLMEDM-KIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDY 735

Query: 310 FNYTTLMNGFCKEGKLQEAKE 330
                L       G+++  K+
Sbjct: 736 ITMEILTEWLSAVGEIERLKK 756


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 225/459 (49%), Gaps = 21/459 (4%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM------ 121
           L++ +++P+ A + F     + GF H+  +Y  +   L   + +   ++VL++M      
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD 174

Query: 122 ---------TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
                    T   C    G+F  L     +  + E  ++ F K+    R  P  ++ +  
Sbjct: 175 CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRF-RVFPKTRSCNGL 233

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L+   +  + D  + F K        +P    +NI+I   CK G +E+A  + +EMK   
Sbjct: 234 LHRFAKLGKTDDVKRFFK-DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVD 291
           +  P+ +TY+++IDG  K GR  + +  FEEM  KD    PD +TYN LI+ FC+ GK+ 
Sbjct: 293 L-VPDTVTYNSMIDGFGKVGRLDDTVCFFEEM--KDMCCEPDVITYNALINCFCKFGKLP 349

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
              +    MK NG  PNV +Y+TL++ FCKEG +Q+A + + +M+   L P+   YT+LI
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +  C+ G + +A  L  EM + G + ++VT+  ++ GLC   +++EA  +  K+   G+ 
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N ASY  +++   +   +++A+ELL  +  RG  P        +  LC     E A + 
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  + E G K  S  +  L++   +         LLDE+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 224/462 (48%), Gaps = 6/462 (1%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
           + A  R    ++   I  +  E + + A  +F  + + +G   +  TY +++D   +  +
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGR 312

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
            +       +M    C+     +  L+  F         LE + ++      KP++ + S
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG-NGLKPNVVSYS 371

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           T ++   +   +  A  F     + + L PN   +  LI  +CK G L  AF +  EM +
Sbjct: 372 TLVDAFCKEGMMQQAIKFY-VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             + + N++TY+ LIDGLC   R +EA ELF +M +   ++P+  +YN LI GF +   +
Sbjct: 431 VGVEW-NVVTYTALIDGLCDAERMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNM 488

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           DRA +++  +K  G  P++  Y T + G C   K++ AK V +EMK   +K +++ YTTL
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD-G 409
           ++ + ++G   E L LL EMKE   +  +VTF +++ GLC+   + +A+    ++  D G
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N A +  +++  C+  ++E A  L   M+ +G +P       L+    K G   +A 
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                + E+G K +  ++  LV  +    +L  A   L+E++
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 710



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 170/348 (48%), Gaps = 5/348 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY +++D   +         +  +M     +++   +  L+    +    +  
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E+F K+       P+L + +  ++  +++  +D A   L    +   +KP+  ++   I
Sbjct: 457 EELFGKMDT-AGVIPNLASYNALIHGFVKAKNMDRALELLN-ELKGRGIKPDLLLYGTFI 514

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C    +E+A  V+ EMK+  +   +LI Y+TL+D   K+G   E + L +EM   D 
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLI-YTTLMDAYFKSGNPTEGLHLLDEMKELD- 572

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEA 328
           I    +T+ VLIDG C+   V +A      + N+ G   N   +T +++G CK+ +++ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +F++M    L PD   YT+L++   + G V EAL L  +M E G K D++ +  ++ G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           L    ++++A   LE++  +GI+ ++     VL    + G +++A+EL
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 144/312 (46%), Gaps = 3/312 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  ++D L   ++ +  + +  +M       +   +  L+  F      +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R LE+ +++      KP L    T +  L    +++ A+  +    +   +K N+ I+  
Sbjct: 490 RALELLNELKG-RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN-EMKECGIKANSLIYTT 547

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+  + K G       +L EMK+  +    ++T+  LIDGLCKN    +A++ F  + + 
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEV-TVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             +  +A  +  +IDG C+  +V+ A  + E M   G  P+   YT+LM+G  K+G + E
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  + D+M    +K D + YT+L+       ++ +A   L+EM   G   D V    +L 
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726

Query: 388 GLCREGKIEEAL 399
                G I+EA+
Sbjct: 727 KHYELGCIDEAV 738


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 180/314 (57%), Gaps = 5/314 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N ++  +C  G +++A     E    + +Y    T  TLI GLC  GR   A+ 
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAY----TCDTLIRGLCGRGRTANALA 181

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + +EM+ + + +PD +TY +L++  C+     +A K+++ M++ GC P++  Y  ++NG 
Sbjct: 182 VLDEMLRR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+EG++ +A E    + ++  +P+T+ Y  ++   C A R ++A EL+ EM ++GC  ++
Sbjct: 241 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 300

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFN+++  LCR+G +E AL +LE++   G   N  SY  +L+  C++ +++KA+  L L
Sbjct: 301 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDL 360

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   + N LL  LC++G  + A   L  L + G  P   S+  +++ + +  K
Sbjct: 361 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420

Query: 500 LLFAFELLDELVIK 513
              A ELL+E+V K
Sbjct: 421 TKEALELLNEMVSK 434



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 213/424 (50%), Gaps = 28/424 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++    +  T  T++  L    +     AVL +M    C      +  L++     S ++
Sbjct: 153 ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 212

Query: 148 RVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           + +++  ++    R+K   P +   +  +N + +  +VD A  FLK    +   +PNT  
Sbjct: 213 QAMKLLDEM----RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY-GCEPNTVS 267

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +NI++K  C     E A E++ EM +     PN++T++ LI  LC+ G    A+E+ E+ 
Sbjct: 268 YNIVLKGLCTAERWEDAEELMGEMGQKGCP-PNVVTFNMLISFLCRKGLVEPALEVLEQ- 325

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K    P++L+YN L+  FC+  K+D+A   ++ M + GC P++ +Y TL+   C+ G+
Sbjct: 326 IPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 385

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E+  ++K+    P  I Y T+I+   +AG+  EALELL EM  +G + DI+T++ 
Sbjct: 386 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 445

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           I  GLCRE +IE+A+    K+   GI  N   Y  ++   C++ E   AI+L   M+  G
Sbjct: 446 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 505

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +P+ +T   L+  L   G+ ++A                    LL EL  RG ++L   
Sbjct: 506 CMPNESTYTILIEGLAYEGLIKEA------------------RDLLDELCSRGEEILLDV 547

Query: 505 ELLD 508
            L+D
Sbjct: 548 HLID 551



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 184/327 (56%), Gaps = 4/327 (1%)

Query: 187 NFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           N L   ++ LR +  P+   + IL++  CKR   + A ++L EM+    + P+++TY+ +
Sbjct: 178 NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCT-PDIVTYNVV 236

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           ++G+C+ GR  +AIE  + + S     P+ ++YN+++ G C   + + A+++M  M   G
Sbjct: 237 VNGICQEGRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 295

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C PNV  +  L++  C++G ++ A EV +++  +   P+++ Y  L++ FC+  ++D+A+
Sbjct: 296 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAM 355

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
             L  M  RGC  DIV++N +L  LCR G+++ A+ +L +L   G      SY  V++  
Sbjct: 356 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
            + G+ ++A+ELL  M+ +G  P   T + +   LC+    EDA  A   + +MG +P +
Sbjct: 416 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 475

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
             +  ++  +C+ R+   A +L   ++
Sbjct: 476 VLYNAIILGLCKRRETHSAIDLFAYMI 502



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 172/312 (55%), Gaps = 4/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+++   C+ G ++ A E LK +  S    PN ++Y+ ++ GLC   R+ +A E
Sbjct: 228 PDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEE 286

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  K    P+ +T+N+LI   CR G V+ A +++E +   GC+PN  +Y  L++ F
Sbjct: 287 LMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAF 345

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ K+ +A    D M +    PD + Y TL+   CR+G VD A+ELL ++K++GC   +
Sbjct: 346 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++ GL + GK +EAL +L ++   G+  +  +Y  +    C++  +E AI     
Sbjct: 406 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGR 498
           +   G  P+    N +++ LCK      +AI LF  ++  G  P   ++ +L+E +    
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKR-RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 524

Query: 499 KLLFAFELLDEL 510
            +  A +LLDEL
Sbjct: 525 LIKEARDLLDEL 536



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 134/296 (45%), Gaps = 42/296 (14%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L + G   EA+ L           PDA T   LI      G+   A++++       C P
Sbjct: 77  LVRRGELDEALRLVGSARR-----PDAGTCAALIKKLSASGRTAEARRVLA-----ACGP 126

Query: 308 NVFNYTTLMNGFCKEGKLQEAKE--------------------------------VFDEM 335
           +V  Y  +M G+C  G++  A+                                 V DEM
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEM 186

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PD + YT L+   C+     +A++LL EM+++GC  DIVT+N+++ G+C+EG++
Sbjct: 187 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 246

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           ++A+  L+ L   G   N  SY IVL   C     E A EL+  M  +G  P+  T N L
Sbjct: 247 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 306

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC+ G+ E A   L  + + G  P S S+  L+   C+ +K+  A   LD +V
Sbjct: 307 ISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 198/395 (50%), Gaps = 43/395 (10%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           RV+E+  +       KP + A +  ++  I++NQ++ A   L        L P+   +NI
Sbjct: 125 RVMEILERYG-----KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFL-PDVVTYNI 178

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   C RG L+ A E+ +E+ K     P +ITY+ LI+    +G    A++L +EM+SK
Sbjct: 179 MIGSFCSRGKLDLALEIFEELLKDNCE-PTVITYTILIEATILDGGIDVAMKLLDEMLSK 237

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRA---------------------------------- 293
             + PD LTYN +I G C+   VD+A                                  
Sbjct: 238 -GLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSE 296

Query: 294 -KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            +K++  M + GC PNV  ++ L+   C++GK++EA  +   MK   LKPD   Y  LI 
Sbjct: 297 GEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIA 356

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FCR GR+D A E L+ M   GC  DIV +N I+ GLCR GK ++AL + EKL   G   
Sbjct: 357 GFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPP 416

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N +SY  + +     G+  +A+E++  +L +G  P   T N L+  LC+ GM ++A   L
Sbjct: 417 NVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELL 476

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             +    ++P   S+ +++  +C+  +   A E+L
Sbjct: 477 VDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVL 511



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 183/334 (54%), Gaps = 7/334 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLES 220
           +P++   +  +   I    +D+A   L   ++ L   L+P+T  +N +I+  CK   ++ 
Sbjct: 205 EPTVITYTILIEATILDGGIDVAMKLL---DEMLSKGLEPDTLTYNAIIRGMCKEMMVDK 261

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           AFE+L+ +  S+   P++ITY+ L+  L   G++ E  +L  EM+S     P+ +T+++L
Sbjct: 262 AFELLRSLS-SRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI-GCKPNVVTHSIL 319

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I   CR GKV+ A  ++  MK  G  P+ + Y  L+ GFC+EG+L  A E  + M +   
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            PD + Y T++   CR G+ D+ALE+ +++ E GC  ++ ++N +   L   G    AL 
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           M+ KL   GI  ++ +Y  +++  C+ G +++AIELL  M    + P+  + N +L+ LC
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           K   A DA   L  + E G +P   ++ LL+E I
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 163/313 (52%), Gaps = 2/313 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N LI    K   LE+A  VL  MK S+   P+++TY+ +I   C  G+   A+
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMK-SRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+FEE++ KD   P  +TY +LI+     G +D A K+++ M + G  P+   Y  ++ G
Sbjct: 194 EIFEELL-KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKE  + +A E+   + +   KPD I Y  L+      G+  E  +L+ EM   GCK +
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VT +I++G LCR+GK+EEA+ +L  +   G+  +   Y  ++   C++G L+ A E L 
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G LP     N ++  LC+ G A+ A      L E+G  P   S+  L   +    
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432

Query: 499 KLLFAFELLDELV 511
               A E++ +L+
Sbjct: 433 DRYRALEMILKLL 445



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 154/304 (50%), Gaps = 3/304 (0%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C+ G    +   L+ M     + P++I  + LI G   +    +A  + E +   
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYT-PDVILCTKLIKGFFNSRNIGKATRVMEILERY 133

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +  PD   YN LI GF +  +++ A ++++ MK+ G  P+V  Y  ++  FC  GKL  
Sbjct: 134 GK--PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A E+F+E+     +P  I YT LI      G +D A++LL EM  +G + D +T+N I+ 
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR 251

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C+E  +++A  +L  L   G   +  +Y I+L     +G+  +  +L+  M+  G  P
Sbjct: 252 GMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKP 311

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T + L+  LC+ G  E+A   L  + E G KP++  +  L+   CR  +L  A E L
Sbjct: 312 NVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFL 371

Query: 508 DELV 511
           + ++
Sbjct: 372 EYMI 375



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 9/168 (5%)

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE---GKIEEALGMLEKLW 406
           L+N  CRAG+ +E+L  L+ M ++G   D++    ++ G       GK    + +LE+  
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
              ++    +Y  +++   +  +LE A  +L  M  RGFLP   T N ++   C  G   
Sbjct: 135 KPDVF----AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKL- 189

Query: 467 DAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           D A+ +F  L++   +P   ++ +L+E       +  A +LLDE++ K
Sbjct: 190 DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK 237



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 7/179 (3%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI- 156
           Y TI+  L R  K +    V  ++    C  +   +  L     +     R LEM  K+ 
Sbjct: 386 YNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLL 445

Query: 157 -HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
              I  ++ +  ++ +CL        VD A   L    Q  R +PN   +NI++   CK 
Sbjct: 446 NQGIDPDEITYNSLISCL---CRDGMVDEAIELL-VDMQSGRYRPNVVSYNIILLGLCKV 501

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
                A EVL  M + +   PN  TY  LI+G+  +G   EA+EL   +   + I  D+
Sbjct: 502 NRANDAIEVLAAMTE-KGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDS 559


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 205/393 (52%), Gaps = 4/393 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G  HN  T   +L+   R  +     + L +M     +     F +L+  F         
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L MF ++  +  E P++   +T ++ L +S QVD A + L        ++P+   +N LI
Sbjct: 171 LYMFDRMVEMGYE-PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD-GIRPDAVTYNSLI 228

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C  G  + A  ++  M K ++ YP++ T++ LID   K GR  EA EL+EEM+ +  
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRISEAEELYEEMIRR-S 286

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + PD +TY++LI G C   ++D A+++  FM + GC P+V  Y+ L+NG+CK  K++   
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++F EM    +  +T+ YT LI  +CRAG+++ A E+ K M   G   +I+T+N++L GL
Sbjct: 347 KLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGL 406

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  GKIE+AL +L  +   G+  +  +Y I++   C+ GE+  A +L   +  +G  P  
Sbjct: 407 CDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDI 466

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
            T   +++ L K G+  +A      + E G  P
Sbjct: 467 WTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 183/342 (53%), Gaps = 5/342 (1%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           LN     +Q+ LA +FL      L  +P+   F  L+   C+   +  A  +   M   +
Sbjct: 123 LNCFCRCSQLSLALSFLG-KMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM--VE 179

Query: 233 MSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           M Y PN++ Y+T+IDGLCK+ +   A++L   M   D I PDA+TYN LI G C  G+ D
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EVDGIRPDAVTYNSLISGLCNSGRWD 238

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A +++  M      P+VF +  L++   KEG++ EA+E+++EM    L PD + Y+ LI
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI 298

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
              C   R+DEA ++   M  +GC  D+VT++I++ G C+  K+E  + +  ++   G+ 
Sbjct: 299 YGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y +++   C+ G+L  A E+ + M+  G  P+  T N LL  LC  G  E A + 
Sbjct: 359 RNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVI 418

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L  + + G   +  ++ +++  +C+  ++  A++L   L +K
Sbjct: 419 LADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLK 460



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 182/371 (49%), Gaps = 40/371 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ + E  G+  N   Y TI+D L + K+ +    +L +M  +      GI     
Sbjct: 170 ALYMFDRMVEM-GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD------GI----- 217

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                    +P     ++ ++ L  S + D A   +    +   
Sbjct: 218 -------------------------RPDAVTYNSLISGLCNSGRWDDATRMVSCMTKR-E 251

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   FN LI    K G +  A E+ +EM +  +  P+++TYS LI GLC   R  EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD-PDIVTYSLLIYGLCMYSRLDEA 310

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F  MVSK    PD +TY++LI+G+C+  KV+   K+   M   G   N   YT L+ 
Sbjct: 311 EQMFGFMVSK-GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQ 369

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C+ GKL  A+E+F  M    + P+ I Y  L++  C  G++++AL +L +M++ G  A
Sbjct: 370 GYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDA 429

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DIVT+NII+ G+C+ G++ +A  +   L   G+  +  +Y  ++    +KG   +A  L 
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALF 489

Query: 438 RLMLCRGFLPH 448
           R M   G LP+
Sbjct: 490 RKMKEDGILPN 500



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 134/283 (47%), Gaps = 1/283 (0%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S+ +Y     Y  ++    +  +  ++++LF  MV + + LP    ++ L+    +  K 
Sbjct: 39  SRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMV-QCRPLPSIADFSRLLSAISKMKKY 97

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D    + E M+  G   N+     L+N FC+  +L  A     +M     +PD + + +L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSL 157

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +N FCR  R+ +AL +   M E G + ++V +N I+ GLC+  +++ AL +L ++  DGI
Sbjct: 158 LNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI 217

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  +Y  +++  C  G  + A  ++  M  R   P   T N L+    K G   +A  
Sbjct: 218 RPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEE 277

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               ++     P+  +++LL+  +C   +L  A ++   +V K
Sbjct: 278 LYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK 320


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 221/434 (50%), Gaps = 4/434 (0%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F  +S+++    N+ TY+ ++  L    + E    + ++M  + C+     +  L+
Sbjct: 182 AFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 241

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K   +  + ++ ++M  ++       P++   +  ++ L    +++ A    +   +H  
Sbjct: 242 KAKCDIGMTDKAMKMLDEM-ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-G 299

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    FN LI  +CK G + SAF++L  M+K     PN+ TY+ L++GLC+  +  +A
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK-PNIRTYNELMEGLCRVSKSYKA 358

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L   +V  + +LPD +TYN+L+DGFC+ G+++ A  I   M + G  P+ F +T L++
Sbjct: 359 FLLLRRVVD-NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G+L++A  +   M    +  D + +T LI+  C+ G+  +   L + M E  C  
Sbjct: 418 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 477

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              TFN  L  L ++ K+ EA  ML K+   G+  +  ++ I++   C+ GE   ++++L
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 537

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P+  T   ++  LC  G  E+A   LF +   G  P   ++A+LV+   + 
Sbjct: 538 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 597

Query: 498 RKLLFAFELLDELV 511
            +L  AF+++  +V
Sbjct: 598 GRLDRAFQIVSTMV 611



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 167/308 (54%), Gaps = 4/308 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T +   L+  +C+R  L  AF V ++M K +   PN +TYS LI GLC+ GR  EA +L
Sbjct: 162 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQL 221

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EMV K    P   TY VLI   C  G  D+A K+++ M    C PNV  YT L++  C
Sbjct: 222 KQEMVEKG-CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 280

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +EGK++EA  VF +M    L P  I +  LIN +C+ G V  A +LL  M++  CK +I 
Sbjct: 281 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 340

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N ++ GLCR  K  +A  +L ++  +G+  ++ +Y I+++  C++G+L  A  +   M
Sbjct: 341 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 400

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC---RG 497
              G  P   T   L+  LCK G  E A   L  +V+ G   +  ++  L++  C   + 
Sbjct: 401 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 460

Query: 498 RKLLFAFE 505
           + + F FE
Sbjct: 461 KDVCFLFE 468



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 146/273 (53%), Gaps = 2/273 (0%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           I Y T+++ LCKNG F +A E+F   V +     D      L+   CR   +  A ++ E
Sbjct: 129 IDYRTVVNALCKNG-FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 187

Query: 299 FM-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
            M K   C PN   Y+ L++G C+ G+L+EA ++  EM     +P T  YT LI   C  
Sbjct: 188 KMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 247

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G  D+A+++L EM  + C  ++ T+ I++  LCREGKIEEA G+  K+   G+     ++
Sbjct: 248 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 307

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++N  C++G +  A +LL +M      P+  T NEL+  LC+   +  A + L  +V+
Sbjct: 308 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 367

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P+  ++ +LV+  C+  +L  AF + + +
Sbjct: 368 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 400



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 194/399 (48%), Gaps = 9/399 (2%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E +   A  IFN+++   G   +  T+  ++D L +  + E  + +L  M  +     E 
Sbjct: 387 EGQLNMAFNIFNSMN-SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 445

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            F  L+         + V  +F  +    R   +    +  L+ L +  +++ A   L  
Sbjct: 446 TFTALIDGHCKIGKAKDVCFLFENMVE-NRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 504

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             ++  L P+     ILI+ HC+ G    + ++L+ MK++  S PN+ TY+ +I+GLC N
Sbjct: 505 MMKY-GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS-PNVYTYTIIINGLCNN 562

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  EA  +   M S   + P+  TY VL+    + G++DRA +I+  M  NGC PN   
Sbjct: 563 GRVEEAETILFSM-SSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 621

Query: 312 YTTLMNGFCKEGKLQEAKEVFD--EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           Y+ L++GF        A+ +    ++    L  +      L +   R   VD AL++  E
Sbjct: 622 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE 681

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           +K+ G   + + +N ++ GLC+EG+I EA  + + +   G++ +KA   I+ ++ C+  +
Sbjct: 682 IKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY-CKTCK 739

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            +  +E ++L+L   F+P +A+   ++  L   G  ++A
Sbjct: 740 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 778



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 45/367 (12%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQM----------TYET-----CKFHEGIFLNLMK 138
           N  TY  ++D+L R  K E  + V R+M          T+       CK  EG  ++  +
Sbjct: 268 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK--EGWVVSAFQ 325

Query: 139 HFS-----NCSLHERVLEMFHKIHPITREKPSLKAI--------------STCLNLLIES 179
             S     NC  + R       +  + R   S KA                   N+L++ 
Sbjct: 326 LLSVMEKGNCKPNIRTYNEL--MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 383

Query: 180 ----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
                Q+++A N     N    L+P+   F  LI   CK G LE A  +L  M K  +S 
Sbjct: 384 FCKEGQLNMAFNIFNSMNSA-GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 442

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
              +T++ LIDG CK G+ ++   LFE MV +++ L  A T+N  +D   +  K++ A  
Sbjct: 443 DE-VTFTALIDGHCKIGKAKDVCFLFENMV-ENRCLTTAHTFNCFLDALGKDYKLNEANA 500

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M   G  P+V  +T L+ G C+ G+   + ++ + MK     P+   YT +IN  C
Sbjct: 501 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 560

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
             GRV+EA  +L  M   G   +  T+ +++    + G+++ A  ++  +  +G   N  
Sbjct: 561 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSH 620

Query: 416 SYRIVLN 422
            Y  +L+
Sbjct: 621 IYSALLS 627



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 38/249 (15%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQ--------------------------------- 326
           M N G      +Y T++N  CK G +Q                                 
Sbjct: 119 MVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDD 178

Query: 327 --EAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
             EA  VF++M K    +P+++ Y+ LI+  C AGR++EA +L +EM E+GC+    T+ 
Sbjct: 179 LGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++   C  G  ++A+ ML+++       N  +Y I+++  C++G++E+A  + R ML  
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLF 502
           G  P   T N L+   CK G    +A  L  ++E G  KP   ++  L+E +CR  K   
Sbjct: 299 GLCPGIITFNALINGYCKEGWVV-SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 503 AFELLDELV 511
           AF LL  +V
Sbjct: 358 AFLLLRRVV 366



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 10/252 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +Q G + N  TY  I++ L    + E  + +L  M+      +   +  L+K        
Sbjct: 541 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 600

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTC 203
           +R    F  +  + +   +P+    S  L+  + SN    A+      +   R L     
Sbjct: 601 DRA---FQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEN 657

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
             N L  H  +   ++ A ++  E+KK  +   +L  Y+ L+ GLCK GR  EA +L ++
Sbjct: 658 DNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL--YNFLVVGLCKEGRIIEADQLTQD 715

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           MV K  + PD    ++ I+ +C+  K D   + M+ + +N   P+  +Y  +++G   EG
Sbjct: 716 MV-KHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEG 773

Query: 324 KLQEAKEVFDEM 335
           ++QEA+++  ++
Sbjct: 774 RVQEAQKLVSDL 785


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 221/434 (50%), Gaps = 4/434 (0%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F  +S+++    N+ TY+ ++  L    + E    + ++M  + C+     +  L+
Sbjct: 225 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 284

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K   +  + ++ ++M  ++       P++   +  ++ L    +++ A    +   +H  
Sbjct: 285 KAKCDIGMTDKAMKMLDEM-ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-G 342

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    FN LI  +CK G + SAF++L  M+K     PN+ TY+ L++GLC+  +  +A
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK-PNIRTYNELMEGLCRVSKSYKA 401

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L   +V  + +LPD +TYN+L+DGFC+ G+++ A  I   M + G  P+ F +T L++
Sbjct: 402 FLLLRRVVD-NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G+L++A  +   M    +  D + +T LI+  C+ G+  +   L + M E  C  
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              TFN  L  L ++ K+ EA  ML K+   G+  +  ++ I++   C+ GE   ++++L
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P+  T   ++  LC  G  E+A   LF +   G  P   ++A+LV+   + 
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 640

Query: 498 RKLLFAFELLDELV 511
            +L  AF+++  +V
Sbjct: 641 GRLDRAFQIVSTMV 654



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/312 (34%), Positives = 169/312 (54%), Gaps = 4/312 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T +   L+  +C+R  L  AF V ++M K +   PN +TYS LI GLC+ GR  EA +L
Sbjct: 205 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQL 264

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EMV K    P   TY VLI   C  G  D+A K+++ M    C PNV  YT L++  C
Sbjct: 265 KQEMVEKG-CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 323

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +EGK++EA  VF +M    L P  I +  LIN +C+ G V  A +LL  M++  CK +I 
Sbjct: 324 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 383

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N ++ GLCR  K  +A  +L ++  +G+  ++ +Y I+++  C++G+L  A  +   M
Sbjct: 384 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 443

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC---RG 497
              G  P   T   L+  LCK G  E A   L  +V+ G   +  ++  L++  C   + 
Sbjct: 444 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 503

Query: 498 RKLLFAFELLDE 509
           + + F FE + E
Sbjct: 504 KDVCFLFENMVE 515



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 146/273 (53%), Gaps = 2/273 (0%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           I Y T+++ LCKNG F +A E+F   V +     D      L+   CR   +  A ++ E
Sbjct: 172 IDYRTVVNALCKNG-FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 230

Query: 299 FM-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
            M K   C PN   Y+ L++G C+ G+L+EA ++  EM     +P T  YT LI   C  
Sbjct: 231 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 290

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G  D+A+++L EM  + C  ++ T+ I++  LCREGKIEEA G+  K+   G+     ++
Sbjct: 291 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 350

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++N  C++G +  A +LL +M      P+  T NEL+  LC+   +  A + L  +V+
Sbjct: 351 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 410

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P+  ++ +LV+  C+  +L  AF + + +
Sbjct: 411 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 443



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 194/399 (48%), Gaps = 9/399 (2%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E +   A  IFN+++   G   +  T+  ++D L +  + E  + +L  M  +     E 
Sbjct: 430 EGQLNMAFNIFNSMN-SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 488

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            F  L+         + V  +F  +    R   +    +  L+ L +  +++ A   L  
Sbjct: 489 TFTALIDGHCKIGKAKDVCFLFENMVE-NRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 547

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             ++  L P+     ILI+ HC+ G    + ++L+ MK++  S PN+ TY+ +I+GLC N
Sbjct: 548 MMKY-GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS-PNVYTYTIIINGLCNN 605

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  EA  +   M S   + P+  TY VL+    + G++DRA +I+  M  NGC PN   
Sbjct: 606 GRVEEAETILFSM-SSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 664

Query: 312 YTTLMNGFCKEGKLQEAKEVFD--EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           Y+ L++GF        A+ +    ++    L  +      L +   R   VD AL++  E
Sbjct: 665 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDE 724

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           +K+ G   + + +N ++ GLC+EG+I EA  + + +   G++ +KA   I+ ++ C+  +
Sbjct: 725 IKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY-CKTCK 782

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            +  +E ++L+L   F+P +A+   ++  L   G  ++A
Sbjct: 783 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 821



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 45/367 (12%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQM----------TYET-----CKFHEGIFLNLMK 138
           N  TY  ++D+L R  K E  + V R+M          T+       CK  EG  ++  +
Sbjct: 311 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK--EGWVVSAFQ 368

Query: 139 HFS-----NCSLHERVLEMFHKIHPITREKPSLKAI--------------STCLNLLIES 179
             S     NC  + R       +  + R   S KA                   N+L++ 
Sbjct: 369 LLSVMEKGNCKPNIRTYNEL--MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 426

Query: 180 ----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
                Q+++A N     N    L+P+   F  LI   CK G LE A  +L  M K  +S 
Sbjct: 427 FCKEGQLNMAFNIFNSMNS-AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 485

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
              +T++ LIDG CK G+ ++   LFE MV +++ L  A T+N  +D   +  K++ A  
Sbjct: 486 DE-VTFTALIDGHCKIGKAKDVCFLFENMV-ENRCLTTAHTFNCFLDALGKDYKLNEANA 543

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M   G  P+V  +T L+ G C+ G+   + ++ + MK     P+   YT +IN  C
Sbjct: 544 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 603

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
             GRV+EA  +L  M   G   +  T+ +++    + G+++ A  ++  +  +G   N  
Sbjct: 604 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSH 663

Query: 416 SYRIVLN 422
            Y  +L+
Sbjct: 664 IYSALLS 670



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 38/249 (15%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQ--------------------------------- 326
           M N G      +Y T++N  CK G +Q                                 
Sbjct: 162 MVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDD 221

Query: 327 --EAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
             EA  VF++M K    +P+++ Y+ LI+  C AGR++EA +L +EM E+GC+    T+ 
Sbjct: 222 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 281

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++   C  G  ++A+ ML+++       N  +Y I+++  C++G++E+A  + R ML  
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLF 502
           G  P   T N L+   CK G    +A  L  ++E G  KP   ++  L+E +CR  K   
Sbjct: 342 GLCPGIITFNALINGYCKEGWVV-SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 503 AFELLDELV 511
           AF LL  +V
Sbjct: 401 AFLLLRRVV 409



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 10/252 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +Q G + N  TY  I++ L    + E  + +L  M+      +   +  L+K        
Sbjct: 584 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 643

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTC 203
           +R    F  +  + +   +P+    S  L+  + SN    A+      +   R L     
Sbjct: 644 DRA---FQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEN 700

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
             N L  H  +   ++ A ++  E+KK  +   +L  Y+ L+ GLCK GR  EA +L ++
Sbjct: 701 DNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL--YNFLVVGLCKEGRIIEADQLTQD 758

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           MV K  + PD    ++ I+ +C+  K D   + M+ + +N   P+  +Y  +++G   EG
Sbjct: 759 MV-KHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEG 816

Query: 324 KLQEAKEVFDEM 335
           ++QEA+++  ++
Sbjct: 817 RVQEAQKLVSDL 828


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 48/368 (13%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS  A ++ ++ L  +N  D A+      N+     P+   +N++I   CKRG LE A +
Sbjct: 356 PSTVAYTSLIHGLCMANSFDDARELFADMNRR-GCPPSPVTYNVMIDASCKRGMLEEACD 414

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM------------------- 264
           ++K+M +     P+++TY+T++DGLCK+ R  EA+ LF EM                   
Sbjct: 415 LIKKMIEDG-HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473

Query: 265 ------------------------VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
                                   ++ D  +PD +TY+ LI G C   +VD A+ ++E M
Sbjct: 474 CQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 533

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
               C P V    TL++G CK G+++EA+EV D M +    PD + Y TL++  CRAG+ 
Sbjct: 534 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 593

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           + A ELL +M  RG   ++VT+  ++ GLC+  ++ EA G+  ++   G   N  +Y  +
Sbjct: 594 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 653

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +   C  G+++  ++L   M+C G  P +     L   LCK+G    +A AL  L E   
Sbjct: 654 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR---SARALEILREGRE 710

Query: 481 KPESDSWA 488
              S++W 
Sbjct: 711 SLRSEAWG 718



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 193/374 (51%), Gaps = 13/374 (3%)

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +  ++MF K++      P   +    ++ L ++ +++ A+N  +    H  + P+T  + 
Sbjct: 305 DEAVQMFEKMNE-RNVSPDSWSYGILIDGLAKAGKLNDARNLFQ-KLLHSGVTPSTVAYT 362

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   C   + + A E+  +M +     P+ +TY+ +ID  CK G   EA +L ++M+ 
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCP-PSPVTYNVMIDASCKRGMLEEACDLIKKMI- 420

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE---- 322
           +D  +PD +TYN ++DG C+  +V+ A  +   M+  GC PN  ++ T++ G C++    
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480

Query: 323 -----GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
                GKL EA  +   M +    PD + Y+TLI+  C   RVD+A  LL++M +R CK 
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT N ++ GLC+ G+I+EA  +L+ +   G   +  +Y  +++  C+ G+ E+A ELL
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ RG  P+  T   L+  LCKA    +A      +   G  P   ++  L+   C  
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 660

Query: 498 RKLLFAFELLDELV 511
            ++    +L  E+V
Sbjct: 661 GQVDGGLKLFGEMV 674



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 215/441 (48%), Gaps = 28/441 (6%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F  ++ ++G   +  TY  ++D   +    E    ++++M  +        +  +M
Sbjct: 377 ARELFADMN-RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 435

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 S  E  L +F+++  +    P+ ++ +T +  L + +++D A    K       
Sbjct: 436 DGLCKSSRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRL 494

Query: 198 LK--------PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           LK        P+   ++ LI   C    ++ A  +L++M K Q   P ++T +TLI GLC
Sbjct: 495 LKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK-PTVVTQNTLIHGLC 553

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K GR +EA E+ + MVS  Q  PD +TYN L+ G CR G+ +RA++++  M   G  PNV
Sbjct: 554 KAGRIKEAREVLDAMVSSGQS-PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 612

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             YT L++G CK  +L EA  VF +MK+    P+   YT LI  FC AG+VD  L+L  E
Sbjct: 613 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 672

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGML--------EKLWYDGIYLNKASYRIVL 421
           M   G   D V +  +   LC+ G+   AL +L         + W D +Y      R  +
Sbjct: 673 MVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVY------RFAV 726

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM--G 479
           +   + G++E A+  +R M+  G LP       L+  LCK+G   +A   L  ++++  G
Sbjct: 727 DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYG 786

Query: 480 FKPESDSWALLVELICRGRKL 500
            K    +   + E++ +G ++
Sbjct: 787 GKARGKAAKFVEEMVGKGYEI 807



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 221/469 (47%), Gaps = 55/469 (11%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N++ Y  ++  L +  + +    + R M+ +      G   +++    +    +  L+++
Sbjct: 144 NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVY 203

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            +     R +P L  ++  L       QVD A+  L+         P+   +  ++   C
Sbjct: 204 RE----NRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDE-ECAPDEVSYCTVLDGLC 258

Query: 214 KRGTLESAFEV-----LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           K G +E A  +     L     S  S P+L  Y+ +I GLC+N R  EA+++FE+M  ++
Sbjct: 259 KAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERN 318

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + PD+ +Y +LIDG  + GK++ A+ + + + ++G  P+   YT+L++G C      +A
Sbjct: 319 -VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 377

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           +E+F +M      P  + Y  +I+  C+ G ++EA +L+K+M E G   D+VT+N ++ G
Sbjct: 378 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 437

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVL---------NFSCQKGELEKAIELLRL 439
           LC+  ++EEAL +  ++   G   N+ S+  ++         + +CQ+G+L++A  LL+ 
Sbjct: 438 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKR 497

Query: 440 MLCRGFLPHYAT-----------------------------------SNELLVRLCKAGM 464
           M   G +P   T                                    N L+  LCKAG 
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            ++A   L  +V  G  P+  ++  LV   CR  +   A ELL ++V +
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 606



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 185/384 (48%), Gaps = 43/384 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P     +T L  L ++ ++D A+  +      + + P     + L    C RG++E AF+
Sbjct: 77  PDSFTFTTILCGLCKAGKMDEAELVMDEMRSRM-IPPYFATSSFLAHELCLRGSMERAFQ 135

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK---------DQIL--- 271
           +L+ M  +  S      Y+ ++  LCK  R  +A+EL   M  K         D +L   
Sbjct: 136 LLEIMPVANSS-----AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGL 190

Query: 272 -------------------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
                              P  +T NVL++GFC  G+VD+A++++  M +  C P+  +Y
Sbjct: 191 MDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSY 250

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI------GYTTLINCFCRAGRVDEALEL 366
            T+++G CK G+++EA  +F + +       +       GY  +I   C+  R+DEA+++
Sbjct: 251 CTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQM 310

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
            ++M ER    D  ++ I++ GL + GK+ +A  + +KL + G+  +  +Y  +++  C 
Sbjct: 311 FEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCM 370

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
               + A EL   M  RG  P   T N ++   CK GM E+A   +  ++E G  P+  +
Sbjct: 371 ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 430

Query: 487 WALLVELICRGRKLLFAFELLDEL 510
           +  +++ +C+  ++  A  L +E+
Sbjct: 431 YNTVMDGLCKSSRVEEALLLFNEM 454



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 37/278 (13%)

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           Q  +P  + ++++I G C  GR  EA+++F  M       PD   YNVLID   +  + +
Sbjct: 4   QGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPD--VYNVLIDSLSKRQETE 61

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP--------- 342
             KK+++ M + GC P+ F +TT++ G CK GK+ EA+ V DEM++ ++ P         
Sbjct: 62  AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121

Query: 343 ----------------------DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
                                 ++  Y  ++   C+A RVD+ALEL + M E+       
Sbjct: 122 HELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAG 181

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           + + +L GL   G+I+EAL +  +   +   +   +  ++L   C +G+++KA ELLR M
Sbjct: 182 SLDSVLVGLMDSGRIDEALQVYRENRREPCLV---TLNVLLEGFCSRGQVDKARELLRAM 238

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
                 P   +   +L  LCKAG  E+ A+ LFG  E+
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEE-AVRLFGDREL 275


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 205/395 (51%), Gaps = 27/395 (6%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAV--------- 117
           L+   ++P+ AL+ F     Q GF H   +Y  I+  + R + + +A D V         
Sbjct: 77  LLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRM 136

Query: 118 --------LRQMTYET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSL 166
                   +  M + T   C    G+F  L   F    L E   E F ++    R  P  
Sbjct: 137 DMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNF-RTLPKA 195

Query: 167 KAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           ++ +  L+ L +S    L + F         + P+   +N++I + CK G LE++  +  
Sbjct: 196 RSCNFLLHRLSKSGNGQLVRKFFN-DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFV 254

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVLIDGFC 285
           +M++  +S P+++TY++LIDG  K G   E   LF EM  KD   +PD +TYN LI+ +C
Sbjct: 255 QMREMGLS-PDVVTYNSLIDGYGKVGSLEEVASLFNEM--KDVGCVPDIITYNGLINCYC 311

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           +  K+ RA +    MKNNG  PNV  Y+TL++ FCKEG +Q A ++  +M+   L P+  
Sbjct: 312 KFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEF 371

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YT+LI+  C+AG + EA +LL +M + G K +IVT+  +L GLC+ G++ EA  +   +
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
             DGI  N+  Y  +++   +   +E A+++L+ M
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 166/311 (53%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N LI  +CK   +  AFE   EMK + +  PN++TYSTLID  CK G  + AI+
Sbjct: 298 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK-PNVVTYSTLIDAFCKEGMMQGAIK 356

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  +M  +  +LP+  TY  LID  C+ G +  A K++  M   G   N+  YT L++G 
Sbjct: 357 LLXDM-RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 415

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G++ EA+EVF  M    + P+   YT L++ + +A R+++A+++LK+M E   K D+
Sbjct: 416 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 475

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           + +  I+ G C + K+EE   +LE++   GI  N      +++   + G+   A+   + 
Sbjct: 476 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 535

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G      T   L+  LC+AG+ E A      ++ +G +P    +  L++ +C    
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595

Query: 500 LLFAFELLDEL 510
           +  A +L DE+
Sbjct: 596 IESAKKLFDEM 606



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 211/426 (49%), Gaps = 4/426 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G + +  TY +++D   +    E V ++  +M    C      +  L+  +       
Sbjct: 258 EMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMP 317

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R  E F ++      KP++   ST ++   +   +  A   L    +   L PN   +  
Sbjct: 318 RAFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIKLLX-DMRRTGLLPNEFTYTS 375

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +CK G L  A+++L +M ++ +   N++TY+ L+DGLCK GR  EA E+F  M+ K
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKL-NIVTYTALLDGLCKAGRMIEAEEVFRSML-K 433

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D I P+   Y  L+ G+ +  +++ A KI++ M      P++  Y +++ G C + KL+E
Sbjct: 434 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 493

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
            K + +EMK+  +  + +  TT+I+ + +AG+  +AL   +EM++ G +A IVT+ +++ 
Sbjct: 494 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 553

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC  G +E A+    ++   G+  N A Y  +++  C    +E A +L   M CRG  P
Sbjct: 554 GLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTP 613

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                  L+    K G  ++A + +  + E+  + +   +  LV    +  +L  A +  
Sbjct: 614 DITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFF 673

Query: 508 DELVIK 513
           +E++ K
Sbjct: 674 NEMIEK 679



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 163/307 (53%), Gaps = 2/307 (0%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +F++L     + G LE A E    M+  + + P   + + L+  L K+G  +   + F +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFR-TLPKARSCNFLLHRLSKSGNGQLVRKFFND 220

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+    I P   TYNV+ID  C+ G ++ ++++   M+  G +P+V  Y +L++G+ K G
Sbjct: 221 MIGAG-IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 279

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            L+E   +F+EMK+    PD I Y  LINC+C+  ++  A E   EMK  G K ++VT++
Sbjct: 280 SLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYS 339

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++   C+EG ++ A+ +L  +   G+  N+ +Y  +++ +C+ G L +A +LL  ML  
Sbjct: 340 TLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA 399

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G   +  T   LL  LCKAG   +A      +++ G  P    +  LV    +  ++  A
Sbjct: 400 GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDA 459

Query: 504 FELLDEL 510
            ++L ++
Sbjct: 460 MKILKQM 466



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 163/348 (46%), Gaps = 21/348 (6%)

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM---KKSQMSYP--NL 238
           LA  F K++   +  +  T  + I++    +      A + +KE+    +  M +P  N+
Sbjct: 86  LALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNI 145

Query: 239 I---------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                            +  L     + G   EA E F  M    + LP A + N L+  
Sbjct: 146 FDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM-RNFRTLPKARSCNFLLHR 204

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             + G     +K    M   G  P+VF Y  +++  CKEG L+ ++ +F +M+   L PD
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 264

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y +LI+ + + G ++E   L  EMK+ GC  DI+T+N ++   C+  K+  A     
Sbjct: 265 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFS 324

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  +G+  N  +Y  +++  C++G ++ AI+LL  M   G LP+  T   L+   CKAG
Sbjct: 325 EMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAG 384

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              +A   L  +++ G K    ++  L++ +C+  +++ A E+   ++
Sbjct: 385 NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 186/401 (46%), Gaps = 39/401 (9%)

Query: 70  KCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-------- 121
           K EK P+ A E F+ + +  G   N  TY+T++D   +    +    +L  M        
Sbjct: 312 KFEKMPR-AFEYFSEM-KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPN 369

Query: 122 --TYET-----CK--------------FHEGIFLNLMKH---FSNCSLHERVLEMFHKIH 157
             TY +     CK                 G+ LN++ +           R++E      
Sbjct: 370 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 429

Query: 158 PITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
            + ++   P+ +  +  ++  I++ +++ A   LK   +   +KP+  ++  +I  HC +
Sbjct: 430 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE-CNIKPDLILYGSIIWGHCSQ 488

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
             LE    +L+EMK   +S  N +  +T+ID   K G+  +A+  F+EM     +    +
Sbjct: 489 RKLEETKLILEEMKSRGIS-ANPVISTTIIDAYFKAGKSSDALNFFQEM-QDVGVEATIV 546

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TY VLIDG C  G V+ A      M + G  PNV  YT+L++G C    ++ AK++FDEM
Sbjct: 547 TYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM 606

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +   + PD   +T LI+   + G + EAL L+  M E   + D+  +  ++ G  + G++
Sbjct: 607 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 666

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +A     ++   GI   +     +L    ++G+L++AIEL
Sbjct: 667 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 248/517 (47%), Gaps = 61/517 (11%)

Query: 49  TCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARY 108
           T V     S  + H     L   E +P   L  F    ++ G  HN   +  +L  LA  
Sbjct: 66  TIVKETNPSSLLQH-----LFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANA 120

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKP---- 164
           K +  + A+L          +  IF +L    S    +  +++M    +    E      
Sbjct: 121 KNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALE 180

Query: 165 ----------SLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
                      L A+S    L  L++  ++ + ++  K   +  R+  N   F+++I   
Sbjct: 181 GFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR-RIGVNVVTFDVVINGL 239

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G  + A +V+++MK    S P++ITY+T+IDG CK G+  +A  L +EMV+K +I P
Sbjct: 240 CKVGKFQKAGDVVEDMKAWGFS-PSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHP 297

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN--------------- 317
           + +T+N+LIDGFCR   V  AKK+ E M+  G  PNV  Y +L+N               
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357

Query: 318 --------------------GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
                               GFCK+  L+EA+E+ D++    L P+ I + TLI+ + +A
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           GR+D+A  L   M + G   ++ T+N ++ G CREG ++EA  + +++  +G+  +  +Y
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY 477

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I+++  C+KGE  KA+ LL  M   G  P + T N L+    + G +  AA+ +  L+E
Sbjct: 478 NILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNST-AALNVRTLME 536

Query: 478 -MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             G +    ++ +L++  C   KL  A  LL+E++ K
Sbjct: 537 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK 573



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 172/294 (58%), Gaps = 2/294 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ PN   FNILI   C+   + +A +V +EM++  +  PN++TY++LI+GLC NG+  E
Sbjct: 294 RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ-PNVVTYNSLINGLCSNGKLDE 352

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L ++M S   + P+ +TYN LI+GFC+   +  A+++++ +   G  PNV  + TL+
Sbjct: 353 ALGLQDKM-SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           + + K G++ +A  +   M +  + P+   Y  LI  FCR G V EA +L KEM+  G K
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           AD+VT+NI++  LC++G+  +A+ +L++++  G+  +  +Y  +++   ++G    A+ +
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNV 531

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             LM  +G   +  T N L+   C  G  E+A   L  ++E G  P   ++ +L
Sbjct: 532 RTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 183/389 (47%), Gaps = 45/389 (11%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF---SNCSLH 146
           GF+ +  TY TI+D   +  K    DA+L++M  +    +E  F  L+  F    N +  
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           ++V E                                          Q   L+PN   +N
Sbjct: 319 KKVFEEM----------------------------------------QRQGLQPNVVTYN 338

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   C  G L+ A  +  +M    +  PN++TY+ LI+G CK    +EA E+ ++ + 
Sbjct: 339 SLINGLCSNGKLDEALGLQDKMSGMGLK-PNVVTYNALINGFCKKKMLKEAREMLDD-IG 396

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + P+ +T+N LID + + G++D A  +   M + G  PNV  Y  L+ GFC+EG ++
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA+++  EM+   LK D + Y  L++  C+ G   +A+ LL EM E G     +T+N ++
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G  REG    AL +   +   G   N  +Y +++   C KG+LE+A  LL  ML +G +
Sbjct: 517 DGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 576

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGL 475
           P+  T + L   + + G   D    L+ +
Sbjct: 577 PNRTTYDILRDEMMEKGFIPDIDGHLYNV 605


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 221/434 (50%), Gaps = 4/434 (0%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F  +S+++    N+ TY+ ++  L    + E    + ++M  + C+     +  L+
Sbjct: 248 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 307

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K   +  + ++ ++M  ++       P++   +  ++ L    +++ A    +   +H  
Sbjct: 308 KAKCDIGMTDKAMKMLDEM-ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-G 365

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    FN LI  +CK G + SAF++L  M+K     PN+ TY+ L++GLC+  +  +A
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK-PNIRTYNELMEGLCRVSKSYKA 424

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L   +V  + +LPD +TYN+L+DGFC+ G+++ A  I   M + G  P+ F +T L++
Sbjct: 425 FLLLRRVVD-NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G+L++A  +   M    +  D + +T LI+  C+ G+  +   L + M E  C  
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              TFN  L  L ++ K+ EA  ML K+   G+  +  ++ I++   C+ GE   ++++L
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P+  T   ++  LC  G  E+A   LF +   G  P   ++A+LV+   + 
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 663

Query: 498 RKLLFAFELLDELV 511
            +L  AF+++  +V
Sbjct: 664 GRLDRAFQIVSTMV 677



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/312 (34%), Positives = 169/312 (54%), Gaps = 4/312 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T +   L+  +C+R  L  AF V ++M K +   PN +TYS LI GLC+ GR  EA +L
Sbjct: 228 DTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQL 287

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EMV K    P   TY VLI   C  G  D+A K+++ M    C PNV  YT L++  C
Sbjct: 288 KQEMVEKG-CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLC 346

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +EGK++EA  VF +M    L P  I +  LIN +C+ G V  A +LL  M++  CK +I 
Sbjct: 347 REGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIR 406

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N ++ GLCR  K  +A  +L ++  +G+  ++ +Y I+++  C++G+L  A  +   M
Sbjct: 407 TYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 466

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC---RG 497
              G  P   T   L+  LCK G  E A   L  +V+ G   +  ++  L++  C   + 
Sbjct: 467 NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKA 526

Query: 498 RKLLFAFELLDE 509
           + + F FE + E
Sbjct: 527 KDVCFLFENMVE 538



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 146/273 (53%), Gaps = 2/273 (0%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           I Y T+++ LCKNG F +A E+F   V +     D      L+   CR   +  A ++ E
Sbjct: 195 IDYRTVVNALCKNG-FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 253

Query: 299 FM-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
            M K   C PN   Y+ L++G C+ G+L+EA ++  EM     +P T  YT LI   C  
Sbjct: 254 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 313

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G  D+A+++L EM  + C  ++ T+ I++  LCREGKIEEA G+  K+   G+     ++
Sbjct: 314 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 373

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++N  C++G +  A +LL +M      P+  T NEL+  LC+   +  A + L  +V+
Sbjct: 374 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 433

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P+  ++ +LV+  C+  +L  AF + + +
Sbjct: 434 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM 466



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 161/368 (43%), Gaps = 78/368 (21%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQM----------TYET-----CKFHEGIFLNLMK 138
           N  TY  ++D+L R  K E  + V R+M          T+       CK  EG  ++  +
Sbjct: 334 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK--EGWVVSAFQ 391

Query: 139 HFS-----NCSLHERVLEMFHKIHPITREKPSLKAI--------------STCLNLLIES 179
             S     NC  + R       +  + R   S KA                   N+L++ 
Sbjct: 392 LLSVMEKGNCKPNIRTYNEL--MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449

Query: 180 ----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
                Q+++A N     N    L+P+   F  LI   CK G LE A  +L  M K  +S 
Sbjct: 450 FCKEGQLNMAFNIFNSMNSA-GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 508

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVS----------------------------- 266
              +T++ LIDG CK G+ ++   LFE MV                              
Sbjct: 509 DE-VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 567

Query: 267 -----KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
                K  ++P  +T+ +LI+G CR G+   + K++E MK  GC+PNV+ YT ++NG C 
Sbjct: 568 LGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCN 627

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G+++EA+ +   M +F + P+   Y  L+    +AGR+D A +++  M + GC+ +   
Sbjct: 628 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 687

Query: 382 FNIILGGL 389
           ++ +L G 
Sbjct: 688 YSALLSGF 695



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 38/249 (15%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQ--------------------------------- 326
           M N G      +Y T++N  CK G +Q                                 
Sbjct: 185 MVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDD 244

Query: 327 --EAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
             EA  VF++M K    +P+++ Y+ LI+  C AGR++EA +L +EM E+GC+    T+ 
Sbjct: 245 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 304

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++   C  G  ++A+ ML+++       N  +Y I+++  C++G++E+A  + R ML  
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLF 502
           G  P   T N L+   CK G    +A  L  ++E G  KP   ++  L+E +CR  K   
Sbjct: 365 GLCPGIITFNALINGYCKEGWVV-SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423

Query: 503 AFELLDELV 511
           AF LL  +V
Sbjct: 424 AFLLLRRVV 432



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 136/314 (43%), Gaps = 30/314 (9%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+   LD L +  K    +A+L +M         G+  +++ H      H R  E    +
Sbjct: 547 TFNCFLDALGKDYKLNEANAMLGKM------MKYGLVPSVVTHTILIEGHCRAGETALSL 600

Query: 157 HPITREK-----PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
             + R K     P++   +  +N L  + +V+ A+  L +S     + PN   + +L+K 
Sbjct: 601 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL-FSMSSFGVSPNHFTYAVLVKA 659

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
           H K G L+ AF+++  M K+    PN   YS L+ G                ++S   I 
Sbjct: 660 HVKAGRLDRAFQIVSTMVKNGCQ-PNSHIYSALLSGF---------------VLSNTAIG 703

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
             AL+    +D      + +    +   +K  G  P    Y  L+ G CKEG++ EA ++
Sbjct: 704 ARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQL 762

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             +M    L PD    +++I  +C+  + D  LE +K + +        ++  ++ GL  
Sbjct: 763 TQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRN 821

Query: 392 EGKIEEALGMLEKL 405
           EG+++EA  ++  L
Sbjct: 822 EGRVQEAQKLVSDL 835


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 202/380 (53%), Gaps = 11/380 (2%)

Query: 132 IFLNLMKHFSNCSLH-ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           I +N       CS+   R  E+  KI+ ++ E P++    T +  L +     +A   ++
Sbjct: 211 IMMNFFCRGVGCSVDIRRASEILGKIY-MSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQ 269

Query: 191 ---YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
                NQ L    N C FN +I   C+ G L+ A EV KEMK S +  P++ +YS LIDG
Sbjct: 270 NLCRKNQPLN---NHC-FNAVIYGLCQGGILDEASEVFKEMKNSGI-LPDVYSYSILIDG 324

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C+ GR  +A E+F+EM     ILP+  +Y++LIDGFC+ G+VD+A ++ E MKN+G  P
Sbjct: 325 FCRKGRVDQASEVFKEM-RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILP 383

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V++Y+ L++GFC++G +  A + ++EM +    P    Y +LI  + ++ +   AL+  
Sbjct: 384 DVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEF 443

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           + M++ G   D +  N IL   CR+    +AL + EK   +G++ N  SY   ++  C+ 
Sbjct: 444 RIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRG 503

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
              EKA++LL +ML R  LP     + L+    K   +E A +    + ++G      ++
Sbjct: 504 SVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTY 563

Query: 488 ALLVELICRGRKLLFAFELL 507
            +L+ L     K+  A+ L 
Sbjct: 564 TILINLFISDCKMDVAYRLF 583



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 6/253 (2%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q L + P+T   N ++  +C++     A  + ++ +++ + + N  +Y+  I  +C+   
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHF-NPYSYNEFIHRICRGSV 505

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN--GCNPNVFN 311
             +A++L   M+ ++ +LPD + Y+ LI  F +  +++  K +M F+K    G   NV  
Sbjct: 506 PEKALQLLPVMLKRN-VLPDVVNYSTLISCFAK--RLNSEKAVMLFIKMTKVGITFNVKT 562

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT L+N F  + K+  A  +F  MK   + PD I YT+L+  FC  G +  A  L  EM 
Sbjct: 563 YTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS 622

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
             GC  ++VT+   +    +  K  +A  + EK+   G+Y ++  Y +++   C  GE+ 
Sbjct: 623 REGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMN 682

Query: 432 KAIELLRLMLCRG 444
           +A  L   M   G
Sbjct: 683 RAEALFDEMKQEG 695



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   + ILI        ++ A+ + K MK+S++ YP+ I Y++L+ G C  G    A  L
Sbjct: 559 NVKTYTILINLFISDCKMDVAYRLFKGMKESRV-YPDQIAYTSLVAGFCNTGEMTRARAL 617

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+EM S++   P+ +TY   I+ + +  K ++A K+ E MK  G  P+   YT L+  FC
Sbjct: 618 FDEM-SREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFC 676

Query: 321 KEGKLQEAKEVFDEMKN-FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
             G++  A+ +FDEMK      P+ + YT LIN + +  + D+A +L +EM+ +G
Sbjct: 677 NTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 128/277 (46%), Gaps = 5/277 (1%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           + +  LI     N     A  +F      D I  + ++ N L+       +VD  + + E
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVR-AKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFE 195

Query: 299 FMKNNGCNPNVFNYTTLMNGFCK----EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            +   G  PN+  YT +MN FC+       ++ A E+  ++      P+ + Y T I   
Sbjct: 196 VLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGL 255

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G    A  L++ +  +    +   FN ++ GLC+ G ++EA  + +++   GI  + 
Sbjct: 256 CKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDV 315

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            SY I+++  C+KG +++A E+ + M   G LP+  + + L+   CK G  + A      
Sbjct: 316 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 375

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +   G  P+  S+++L++  CR   +  A +  +E+ 
Sbjct: 376 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMT 412



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 149/346 (43%), Gaps = 41/346 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P++ + S  ++   +  +VD A + F +  N  +   P+   ++ILI   C++G ++SA 
Sbjct: 348 PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGIL--PDVYSYSILIDGFCRKGDMDSAI 405

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL------- 275
           +  +EM  +  S P+   Y +LI G  K+ +F  A++ F  M  K  + PD +       
Sbjct: 406 KFWEEMTSNNFS-PSAFNYCSLIKGYYKSKQFANALKEFRIM-QKLGMWPDTIACNHILS 463

Query: 276 ----------------------------TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
                                       +YN  I   CRG   ++A +++  M      P
Sbjct: 464 IYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLP 523

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V NY+TL++ F K    ++A  +F +M    +  +   YT LIN F    ++D A  L 
Sbjct: 524 DVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLF 583

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           K MKE     D + +  ++ G C  G++  A  + +++  +G   N  +Y   +N   + 
Sbjct: 584 KGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKL 643

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
            +  +A +L   M  RG  P       L+   C  G    A  ALF
Sbjct: 644 NKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAE-ALF 688



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +   I  + K      A ++ ++MK+  + YP+ I Y+ LI   C  G    A  
Sbjct: 628 PNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGV-YPDQILYTMLIAAFCNTGEMNRAEA 686

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+EM  + +  P+ + Y  LI+ + +  K D+A+K+ E M+  G +    +  ++   +
Sbjct: 687 LFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESW 746

Query: 320 C------KEGKL-QEAKEVFDE--MKNFLLKPDTIG 346
           C      K GKL   AK+  D      + L PD+ G
Sbjct: 747 CCRHQVLKTGKLGGRAKQGLDWRFQVKYTLLPDSCG 782


>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 235/497 (47%), Gaps = 16/497 (3%)

Query: 23  SLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIF 82
           S+   S   VI+   P+   P   S   +D  + S  +       +I  +  P  AL  F
Sbjct: 18  SILVTSITSVIQRLNPQNPSPKNISSQPLD--QFSLCLGSNIVTKVIYEQTNPYHALFFF 75

Query: 83  NTVSEQKG----FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           N  S        ++H    Y  I D L  +       ++L+     + K  +     L+K
Sbjct: 76  NWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKN----SNKLSDFFISKLIK 131

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
            + +    +  +  FH+   I      L + ++ L +L+  N + LA+ F     +   +
Sbjct: 132 AYGDRGNVKAAIFWFHQAKQI-ENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVV 190

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   +  +I+ +CK G +E+A +V   M       PNL+ Y+T+I+G CK G    A 
Sbjct: 191 PPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK----PNLLAYNTMINGFCKKGDMESAR 246

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +F+ M+S +  LP+ +TY  LIDG+C+ G+++ AKK M  M N GC PN   Y  ++ G
Sbjct: 247 LVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 306

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C  G++ EAK +  +M+    K +   + +++   C  G+ D+A+  L+ + E     D
Sbjct: 307 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 366

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + ++ +++ G C+ GK +EA+ +L+++   G+     S+  V     + GEL++AI LL+
Sbjct: 367 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 426

Query: 439 LMLCRGFLPHYATSNELLVRLCKA-GMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            M     LP++ + N ++  LC A G  +D    +  ++  G   +   ++ L++  C  
Sbjct: 427 QMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEE 486

Query: 498 RKLLFAFELLDELVIKE 514
             +    ++  E+V K+
Sbjct: 487 GNVENVMQIAHEMVTKK 503



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 162/390 (41%), Gaps = 79/390 (20%)

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           +Q+    C +     L ++   ++  L E   E FH+I       P +   +T +    +
Sbjct: 150 KQIENGACLYSYNSLLGVLVRVNSIKLAE---EFFHQIVKENVVPPDVSTYTTMIRGYCK 206

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
              ++ A+         + +KPN   +N +I   CK+G +ESA  V   M   +   PN 
Sbjct: 207 MGMIENAKKVFDV----MTVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNH 262

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +TY+TLIDG CK G   EA +   EM+++    P+ LTYN +I G C  G+VD AK +M 
Sbjct: 263 VTYTTLIDGYCKKGELEEAKKCMNEMMNRG-CRPNELTYNAMIYGLCINGRVDEAKMLMA 321

Query: 299 FMKNNG-----------------------------------CNPNVFNYTTLMNGFCKEG 323
            M+ NG                                    NP+V +Y  ++NGFCK G
Sbjct: 322 KMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIG 381

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K  EA  +  EM+   LKP    +  +       G +D A+ LLK+M +  C  + V++N
Sbjct: 382 KSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYN 441

Query: 384 IILGGLC------------------------------------REGKIEEALGMLEKLWY 407
            I+ GLC                                     EG +E  + +  ++  
Sbjct: 442 TIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVT 501

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELL 437
               +   S+ +++   C KG++ +A +L 
Sbjct: 502 KKYVIGLESFSVLVKQLCAKGKVTEAEKLF 531



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 40/276 (14%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE--------GIFLN--------LM 137
           N+ TY T++D   +  + E     + +M    C+ +E        G+ +N        LM
Sbjct: 261 NHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLM 320

Query: 138 KHF------SNCSLHERVLEMFHKIHPITRE------------KPSLKAISTCLNLLIES 179
                     N S H+ +L+    +    +              P +K+    +N   + 
Sbjct: 321 AKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKI 380

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-YPNL 238
            + D A + LK   +   LKP    FN + +   + G L+ A  +LK+M   QM   PN 
Sbjct: 381 GKSDEAISLLK-EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM--PQMDCLPNF 437

Query: 239 ITYSTLIDGLC-KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++Y+T+I GLC   GR ++  +L + M+     L D   Y+ L+ G+C  G V+   +I 
Sbjct: 438 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNL-DFTMYSCLLKGYCEEGNVENVMQIA 496

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
             M        + +++ L+   C +GK+ EA+++FD
Sbjct: 497 HEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLFD 532


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 188/345 (54%), Gaps = 3/345 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP L   ++ L  L+ + + D A+   +  +    + P+   FN+LI   C+ G LE A 
Sbjct: 226 KPGLVTYNSVLKGLLRNGRWDKAREVFRAMDA-CGVAPDVRSFNMLIGGFCRAGELEEAL 284

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
              KEM+  +++ P+++++S LI    + G    A E   EM  +  ++PD + Y ++I 
Sbjct: 285 RFYKEMRGRRVT-PDVVSFSCLIGLFTRRGEMDHAAEYLREM-REFGLMPDGVIYTMVIG 342

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GFCR G +  A ++ + M   GC P+V  Y TL+NG CKE +L +A+E+ +EMK   + P
Sbjct: 343 GFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP 402

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   +TTLI+ +CR G +++AL+    + ++  + DIVT+N ++ G+CR+G + +A  + 
Sbjct: 403 DLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELW 462

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +    I+ N  +Y I+++  C+KG+++ A   L  M+ +G +P+  T N ++   C++
Sbjct: 463 DDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRS 522

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           G        L  +      P+  ++  L+    +  K+  AF LL
Sbjct: 523 GNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL 567



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 229/474 (48%), Gaps = 24/474 (5%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +  VDAR R+  +   AA++LI             + VS  KG      TY ++
Sbjct: 192 PDVVTHNVMVDARFRAGDVE--AAMALID------------SMVS--KGIKPGLVTYNSV 235

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSLHERVLEMFHKIHPI 159
           L  L R  +++    V R M  + C     +  F  L+  F      E  L  F+K    
Sbjct: 236 LKGLLRNGRWDKAREVFRAM--DACGVAPDVRSFNMLIGGFCRAGELEEALR-FYKEMRG 292

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
            R  P + + S  + L     ++D A  +L+   +   L P+  I+ ++I   C+ G + 
Sbjct: 293 RRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR-EMREFGLMPDGVIYTMVIGGFCRAGLML 351

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  V  EM       P+++TY+TL++GLCK  R  +A EL  EM  +  + PD  T+  
Sbjct: 352 EALRVRDEMVAFG-CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG-VPPDLCTFTT 409

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI G+CR G +++A +  + + +    P++  Y TL++G C++G L +A E++D+M +  
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P+ + Y+ LI+  C  G+VD A   L EM  +G   +I+T+N I+ G CR G + +  
Sbjct: 470 IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQ 529

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
             L K+ +D +  +  +Y  +++   ++G++ +A  LL++M      P   T N ++   
Sbjct: 530 QFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGF 589

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              G  ++A      +   G +P+  ++  ++           +F+L DE++ K
Sbjct: 590 SVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQK 643



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 161/284 (56%), Gaps = 3/284 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +T LN L +  ++  A+  L    +   + P+ C F  LI  +C+ G +E A +
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKER-GVPPDLCTFTTLIHGYCRDGNIEKALQ 425

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
               +   ++  P+++TY+TLIDG+C+ G   +A EL+++M S+ +I P+ +TY++LID 
Sbjct: 426 FFDTISDQRLR-PDIVTYNTLIDGMCRQGDLGKANELWDDMHSR-EIFPNHVTYSILIDS 483

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C  G+VD A   ++ M N G  PN+  Y +++ G+C+ G + + ++   +M++  + PD
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y TLI+ + + G++ EA  LLK M+    + D VT+N+I+ G    G ++EA  + +
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           K+   GI  ++ +Y  ++N     G  +K+ +L   ML +G  P
Sbjct: 604 KMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 168/314 (53%), Gaps = 2/314 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT   NI++  +CK         V+ EM+K +  +P+++T++ ++D   + G    A+ L
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEK-RCVFPDVVTHNVMVDARFRAGDVEAAMAL 216

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            + MVSK  I P  +TYN ++ G  R G+ D+A+++   M   G  P+V ++  L+ GFC
Sbjct: 217 IDSMVSKG-IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           + G+L+EA   + EM+   + PD + ++ LI  F R G +D A E L+EM+E G   D V
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            + +++GG CR G + EAL + +++   G   +  +Y  +LN  C++  L  A ELL  M
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG  P   T   L+   C+ G  E A      + +   +P+  ++  L++ +CR   L
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455

Query: 501 LFAFELLDELVIKE 514
             A EL D++  +E
Sbjct: 456 GKANELWDDMHSRE 469



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    +  LI    ++ + REA E F  ++     +P A +  +L     R G       
Sbjct: 87  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA-LSRAGWPHLTAD 145

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
               + ++    N +    +++ +CK  +  E   V  EM+   + PD + +  +++   
Sbjct: 146 AYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARF 205

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           RAG V+ A+ L+  M  +G K  +VT+N +L GL R G+ ++A  +   +   G+  +  
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           S+ +++   C+ GELE+A+   + M  R   P   + + L+    + G  + AA  L  +
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM 325

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            E G  P+   + +++   CR   +L A  + DE+V
Sbjct: 326 REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMV 361


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 182/314 (57%), Gaps = 1/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +NIL++  C RG LE A  V+ +M+ +  + PN +TY+TL+   C+ G    A
Sbjct: 6   VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCA-PNAVTYNTLVAAFCRAGELDGA 64

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +   M  +    P+ +T+N +++G C+ G+++ A+K+ + M   G  P+V +Y TL++
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK G L E+  VF EM    L PD + +T+LI+  C+AG +++A+ L+ +M+ERG + 
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VTF  ++ G C++G +++AL  +E++   GI  +   Y  ++N  C+ G ++ A EL+
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R M  +   P   T + ++   CK G  + A      +++ G  P++ +++ L+  +C  
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304

Query: 498 RKLLFAFELLDELV 511
           ++L  A EL + ++
Sbjct: 305 KRLNDACELFENML 318



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 217/410 (52%), Gaps = 15/410 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  TY  ++  L    + E    V+  M    C  +   +  L+  F  C   E
Sbjct: 3   RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF--CRAGE 60

Query: 148 RVLEMFHKIHPITRE----KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPN 201
             L+   ++  + RE    KP+L   ++ +N L ++ +++ A+   K  ++ +R  L P+
Sbjct: 61  --LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR---KVFDEMVREGLAPD 115

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N L+  +CK G L  +  V  EM +  +  P+++T+++LI   CK G   +A+ L 
Sbjct: 116 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL-VPDVVTFTSLIHATCKAGNLEQAVALV 174

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            +M  +  +  + +T+  LIDGFC+ G +D A   +E M+  G  P+V  Y  L+NG+CK
Sbjct: 175 AQMRERG-LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 233

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G++  A+E+  EM+   +KPD + Y+T+I+ +C+ G +D A +L ++M ++G   D +T
Sbjct: 234 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 293

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ ++ GLC E ++ +A  + E +   G+  ++ +Y  +++  C++G +EKA+ L   M+
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            +G LP   T + L+  L K+   ++A   LF L      P++  +  L+
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 171/315 (54%), Gaps = 25/315 (7%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+   +N LI  +CK G ++ A E+++EM+  ++  P+++TYST+I G CK G    A
Sbjct: 217 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVK-PDVVTYSTIISGYCKVGNLDSA 275

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L ++M+ K  +LPDA+TY+ LI G C   +++ A ++ E M   G  P+ F YTTL++
Sbjct: 276 FQLNQKMLKKG-VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 334

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG--- 374
           G CKEG +++A  + DEM    + PD + Y+ LIN   ++ R  EA  LL ++       
Sbjct: 335 GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVP 394

Query: 375 ------------CKADIVTFNIILGGLCREGKIEEA----LGMLEKLWYDGIYLNKASYR 418
                        KA+  +   +L G C +G ++EA      ML++ W     L+ + Y 
Sbjct: 395 DNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW----KLDGSVYS 450

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I+++  C+ G + KA+   + ML  GF P+  ++  L+  L + GM  +A  A+  L+  
Sbjct: 451 ILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTC 510

Query: 479 GFKPESDSWALLVEL 493
               ++++   L++L
Sbjct: 511 CPLADAEASKALIDL 525



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 201/422 (47%), Gaps = 20/422 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           +L +F+ ++ Q+G   +  T+ +++    +    E   A++ QM     + +E  F  L+
Sbjct: 135 SLAVFSEMT-QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 193

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F      +  L    ++     + PS+   +  +N   +  ++DLA+  ++   +  R
Sbjct: 194 DGFCKKGFLDDALLAVEEMRKCGIQ-PSVVCYNALINGYCKLGRMDLARELIR-EMEAKR 251

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+   ++ +I  +CK G L+SAF++ ++M K  +  P+ ITYS+LI GLC+  R  +A
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV-LPDAITYSSLIRGLCEEKRLNDA 310

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELFE M+    + PD  TY  LIDG C+ G V++A  + + M   G  P+V  Y+ L+N
Sbjct: 311 CELFENMLQLG-VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 369

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC---------------FCRAGRVDE 362
           G  K  + +EA  +  ++ +    PD I Y  L+ C               FC  G + E
Sbjct: 370 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 429

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A ++ + M +R  K D   ++I++ G CR G + +AL   +++   G   N  S   ++ 
Sbjct: 430 ADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVR 489

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
              ++G + +A   ++ +L    L     S  L+    K G  +     L G+   G  P
Sbjct: 490 GLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549

Query: 483 ES 484
            S
Sbjct: 550 SS 551



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 1/198 (0%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M  +G  PNV+ Y  L+   C  G+L+EA  V  +M+     P+ + Y TL+  FCRAG 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 360 VDEALELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           +D A  ++  M+E G  K ++VTFN ++ GLC+ G++E A  + +++  +G+  +  SY 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +L+  C+ G L +++ +   M  RG +P   T   L+   CKAG  E A   +  + E 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 479 GFKPESDSWALLVELICR 496
           G +    ++  L++  C+
Sbjct: 181 GLRMNEVTFTALIDGFCK 198


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 186/352 (52%), Gaps = 5/352 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +   +  +     S  +D A   +    +H   KP+   +N +I   CK   +ESA 
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG--KPDVFAYNAVISGFCKANRIESAK 64

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            VL  MK+   S P+++T++ +I   C  G+   A+++FEE++  +   P  +TY +LI+
Sbjct: 65  TVLDRMKRKGFS-PDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIE 123

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            +   G +D A K+++ M + G  P+ F Y  +  G CKEGK+  A E    + +   KP
Sbjct: 124 AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKP 183

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D I Y  L+      G+ DE  + + E+  RGC+ ++VT++I++  LCR+GKIEE++ ++
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV 243

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +   G+  +   Y  ++   C++G+L+ AIE L  M+C GFLP     N ++  LCK 
Sbjct: 244 KVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKN 303

Query: 463 GMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           G   D A+ +FG L E+G  P   S+  ++  +        A  ++ +++ K
Sbjct: 304 GNG-DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSK 354



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 211/424 (49%), Gaps = 19/424 (4%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH------FSNCSLHERVL 150
            Y  ++    +  + E+   VL +M        +G   +++ H      F      +  L
Sbjct: 46  AYNAVISGFCKANRIESAKTVLDRMK------RKGFSPDVVTHNIMIGTFCGKGKIDLAL 99

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNIL 208
           ++F ++      KP+L   +  +   I    +D A   LK  ++ L   L+P+T  +N++
Sbjct: 100 KVFEELLKDNNCKPTLITYTILIEAYILEGGIDEA---LKLLDEMLSRGLEPDTFTYNVI 156

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
            +  CK G ++ AFE ++ +  S+   P++ITY+ L+  L   G++ E  +   E+ S+ 
Sbjct: 157 TRGLCKEGKVDRAFEFVRTLN-SRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR- 214

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              P+ +TY++LI   CR GK++ +  +++ MK  G  P+ + Y  L+  FC+EGKL  A
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            E  D M      PD + Y T++   C+ G  D A+E+  ++ E GC  ++ ++N +L  
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           L   G    ALGM+ ++   GI  +  +Y  +++  C+ G +++AI LL  ML   F P+
Sbjct: 335 LWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPN 394

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             +   +L+ LCKA   +DA   L  ++E G +P   ++ LL+E I        A EL +
Sbjct: 395 IVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELAN 454

Query: 509 ELVI 512
            L I
Sbjct: 455 SLYI 458


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 193/399 (48%), Gaps = 43/399 (10%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           RV+E+  K       +P + A +  +N   + N++D A   L          P+T  +NI
Sbjct: 145 RVMEILEKFG-----QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNI 198

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   C RG L+ A +VL ++  S    P +ITY+ LI+     G   EA++L +EM+S+
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRA---------------------------------- 293
             + PD  TYN +I G C+ G VDRA                                  
Sbjct: 258 G-LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEE 316

Query: 294 -KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            +K+M  M +  C+PNV  Y+ L+   C++GK++EA  +   MK   L PD   Y  LI 
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FCR GR+D A+E L+ M   GC  DIV +N +L  LC+ GK ++AL +  KL   G   
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N +SY  + +     G+  +A+ ++  M+  G  P   T N ++  LC+ GM ++A   L
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             +    F P   ++ +++   C+  ++  A  +L+ +V
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 177/316 (56%), Gaps = 6/316 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLK--EMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           LKP+   +N +I+  CK G ++ AFE+++  E+K S+   P++I+Y+ L+  L   G++ 
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSE---PDVISYNILLRALLNQGKWE 315

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E  +L  +M S ++  P+ +TY++LI   CR GK++ A  +++ MK  G  P+ ++Y  L
Sbjct: 316 EGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +  FC+EG+L  A E  + M +    PD + Y T++   C+ G+ D+ALE+  ++ E GC
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  ++N +   L   G    AL M+ ++  +GI  ++ +Y  +++  C++G +++A E
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M    F P   T N +L+  CKA   EDA   L  +V  G +P   ++ +L+E I 
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554

Query: 496 RGRKLLFAFELLDELV 511
                  A EL ++LV
Sbjct: 555 FAGYRAEAMELANDLV 570



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 3/304 (0%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +    C+ G    +  +L+ M +   + P++I  + LI G        +A+ + E +   
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYN-PDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            Q  PD   YN LI+GFC+  ++D A ++++ M++   +P+   Y  ++   C  GKL  
Sbjct: 154 GQ--PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A +V +++ +   +P  I YT LI      G VDEAL+L+ EM  RG K D+ T+N I+ 
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C+EG ++ A  M+  L   G   +  SY I+L     +G+ E+  +L+  M      P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T + L+  LC+ G  E+A   L  + E G  P++ S+  L+   CR  +L  A E L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 508 DELV 511
           + ++
Sbjct: 392 ETMI 395



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G   E+  + + M      PD I  T LI  F     + +A+ ++ E+ E+  + D+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N ++ G C+  +I++A  +L+++       +  +Y I++   C +G+L+ A+++L  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +L     P   T   L+      G  ++A   +  ++  G KP+  ++  ++  +C+   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 500 LLFAFELLDELVIKES 515
           +  AFE++  L +K S
Sbjct: 279 VDRAFEMVRNLELKGS 294



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +NI++   CK   +E A  VL+ M  +    PN  TY+ LI+G+   G   EA+E
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR-PNETTYTVLIEGIGFAGYRAEAME 564

Query: 260 LFEEMVSKDQI 270
           L  ++V  D I
Sbjct: 565 LANDLVRIDAI 575


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 217/428 (50%), Gaps = 14/428 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G+  +  T+ T++  L  + K     A++ QM    C+     +  ++         +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQN-FLKYSNQHLRLKPNT 202
             L +  K+     EK  ++A     N +I+       +D A N F +  N+ +R  P+ 
Sbjct: 241 LALSLLKKM-----EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR--PDV 293

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             ++ LI   C  G    A  +L +M + +++ PN++T+S LID   K G+  EA +L++
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM+ K  I PD  TY+ LI+GFC   ++D AK + E M +  C PNV  Y+TL+ GFCK 
Sbjct: 353 EMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            +++E  E+F EM    L  +T+ YTTLI+ F +A   D A  + K+M   G   +I+T+
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           NI+L GLC+ GK+ +A+ + E L    +  +  +Y I++   C+ G++E   EL   +  
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G  P+    N ++   C+ G  E+A   L  + E G  P S ++  L+    R      
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591

Query: 503 AFELLDEL 510
           + EL+ E+
Sbjct: 592 SAELIKEM 599



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 222/445 (49%), Gaps = 21/445 (4%)

Query: 79  LEIFNTVSEQK---GFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGI 132
            E+  ++ EQ    G +H+  TY+  ++   R  +     AVL +M    YE        
Sbjct: 99  FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158

Query: 133 FLNLMKHFSNCS----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            LN   H    S    L ++++EM +K        P     +T ++ L   N+   A   
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYK--------PDTFTFTTLIHGLFLHNKASEAVAL 210

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           +    Q    +P+   +  ++   CKRG ++ A  +LK+M+K ++   +++ Y+T+IDGL
Sbjct: 211 VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYNTIIDGL 268

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           CK     +A+ LF EM +K  I PD  TY+ LI   C  G+   A +++  M     NPN
Sbjct: 269 CKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           V  ++ L++ F KEGKL EA++++DEM    + PD   Y++LIN FC   R+DEA  + +
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            M  + C  ++VT++ ++ G C+  ++EE + +  ++   G+  N  +Y  +++   Q  
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           + + A  + + M+  G  P+  T N LL  LCK G    A +    L     +P+  ++ 
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507

Query: 489 LLVELICRGRKLLFAFELLDELVIK 513
           +++E +C+  K+   +EL   L +K
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLK 532



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 205/411 (49%), Gaps = 4/411 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY T+++ L +    +   ++L++M     +    I+  ++         +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             L +F ++      +P +   S+ ++ L    +   A   L    +  ++ PN   F+ 
Sbjct: 276 DALNLFTEMDN-KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSA 333

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI    K G L  A ++  EM K  +  P++ TYS+LI+G C + R  EA  +FE M+SK
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D   P+ +TY+ LI GFC+  +V+   ++   M   G   N   YTTL++GF +      
Sbjct: 393 D-CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+ VF +M +  + P+ + Y  L++  C+ G++ +A+ + + ++    + DI T+NI++ 
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C+ GK+E+   +   L   G+  N  +Y  +++  C+KG  E+A  LL+ M   G LP
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           +  T N L+    + G  E +A  +  +   GF  ++ +  L+  ++  GR
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 159/294 (54%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           ++ A ++  +M KS+  +P+++ ++ L+  + K  +F   I L E+M +   I  D  TY
Sbjct: 64  VDDAVDLFGDMVKSR-PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL-GISHDLYTY 121

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           ++ I+ FCR  ++  A  ++  M   G  P++   ++L+NG+C   ++ +A  + D+M  
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              KPDT  +TTLI+      +  EA+ L+ +M +RGC+ D+VT+  ++ GLC+ G I+ 
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +L+K+    I  +   Y  +++  C+   ++ A+ L   M  +G  P   T + L+ 
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P   +++ L++   +  KL+ A +L DE++
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 167/335 (49%), Gaps = 7/335 (2%)

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           + VDL  + +K      R  P+   FN L+    K    E    + ++M+   +S+ +L 
Sbjct: 66  DAVDLFGDMVKS-----RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLY 119

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TYS  I+  C+  +   A+ +  +M+ K    PD +T + L++G+C   ++  A  +++ 
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G  P+ F +TTL++G     K  EA  + D+M     +PD + Y T++N  C+ G 
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +D AL LLK+M++   +AD+V +N I+ GLC+   +++AL +  ++   GI  +  +Y  
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C  G    A  LL  M+ R   P+  T + L+    K G   +A      +++  
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             P+  +++ L+   C   +L  A  + + ++ K+
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 215/419 (51%), Gaps = 8/419 (1%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+   +    R K+  +   +L  M  + C+ +   +  ++  F   +      E+F+ +
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCK 214
             I    P +   +  L+ L +  +V  ++  L   N+ L+  +  N   FNI I+  C+
Sbjct: 208 LRIGI-FPDVSTFNKLLHTLCKKGEVQESERLL---NKVLKKGMCSNLFTFNIFIQGLCR 263

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G L  A  +L  + +  ++ P+++TY+TLI GLCKN    EA +   ++V+   + PD 
Sbjct: 264 KGMLSGAMSMLDSVIREGLT-PDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG-LEPDG 321

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            TYN LIDG+C+ G +  A+KI++     G  P+ F Y +L+NG C+  ++  A  +F+ 
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNA 381

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
                LKP  I Y  LI   C+ G + +AL+++ EM E GC +DI T+N+++ GLC+ G 
Sbjct: 382 ALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGC 441

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           + +A  ++      G   +  ++  +++  C++ ++E  I++L  M   G  P   T N 
Sbjct: 442 VSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +L  L KA   ED       +VE G  P   ++ +L E +C+  K+  A +L+DE++ K
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNK 560



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 225/454 (49%), Gaps = 9/454 (1%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H AA+  +K +K+P  ALE+FN V  + GF H+  TY  I+ KL  +  F A++ VL + 
Sbjct: 9   HVAAV--LKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAET 66

Query: 122 TYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
             +      EG+++  MK +      +  +++F ++     E PS+ + +  +N+L+ES 
Sbjct: 67  RMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCE-PSVLSYNAIMNILVESG 125

Query: 181 QVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
               A   FL+  N  + + P+   F I IK  C+     SA  +L  M  SQ    N +
Sbjct: 126 YFKQAHKVFLRMKN--VGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNM-VSQGCQLNAV 182

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            Y T++ G  +     EA ELF +M+ +  I PD  T+N L+   C+ G+V  +++++  
Sbjct: 183 AYCTVVAGFYEENYRVEAYELFNDML-RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNK 241

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +   G   N+F +   + G C++G L  A  + D +    L PD + Y TLI   C+   
Sbjct: 242 VLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSN 301

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           V EA + L ++   G + D  T+N ++ G C+ G ++ A  +L+     G   ++ +Y  
Sbjct: 302 VVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCS 361

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++N  CQ  E+++A+ L    L +G  P     N L+  LC+ G+   A   +  + E G
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              +  ++ L++  +C+   +  A  L+++ + K
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAK 455



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 43/349 (12%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           +N L +++++D A   L   N  L   LKP   ++N+LIK  C+ G +  A +++ EM +
Sbjct: 363 INGLCQNDEIDRA---LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSE 419

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           +  S  ++ TY+ +I+GLCK G   +A  L  + ++K  + PD  T+N LIDG+C+  K+
Sbjct: 420 NGCS-SDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYV-PDVFTFNTLIDGYCKQLKM 477

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           +   +I+  M ++G  P+V  Y +++NG  K  K ++  E F+ M      P+ I Y  L
Sbjct: 478 ETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNIL 537

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA------------ 398
               C+AG+V+EAL+L+ E+  +G   D V+F  I+ G    G ++ A            
Sbjct: 538 TESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYK 597

Query: 399 --------------------LGMLEKLWYD----GIYLNKASYRIVLNFSCQKGELEKAI 434
                               L M EKL+ +    G   +  +YR++++  C  G  +   
Sbjct: 598 VSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGY 657

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           + L  M+ +GF+P   T   ++  LC      +A   +  +V  G  PE
Sbjct: 658 KFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPE 706



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 176/353 (49%), Gaps = 40/353 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVL-----KEMKKSQMSY----------------- 235
           L+P+   +N LI  +CK G L++A ++L     K     + +Y                 
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 236 ------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                       P +I Y+ LI GLC+ G   +A+++  EM S++    D  TYN++I+G
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEM-SENGCSSDIWTYNLVING 435

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G V  A  +M      G  P+VF + TL++G+CK+ K++   ++ ++M +  + PD
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y +++N   +A + ++ +E  + M E+GC  + +T+NI+   LC+ GK+ EAL +++
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   GI  +  S+  +++     G+L+ A +L R M  +  + H   +  +++      
Sbjct: 556 EILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEK 615

Query: 464 MAEDAAIALFGLVEMGF---KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +       LF  +EMG     P++ ++ ++++  C        ++ L E++ K
Sbjct: 616 LDLHMGEKLF--LEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEK 666



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 135/254 (53%), Gaps = 3/254 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FN LI  +CK+  +E+  ++L +M    ++ P++ITY+++++GL K  +  + +E
Sbjct: 459 PDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVT-PDVITYNSVLNGLSKAVKNEDLME 517

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            FE MV K  + P+ +TYN+L +  C+ GKV+ A  +++ + N G  P+  ++ T+++GF
Sbjct: 518 TFETMVEKGCV-PNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGF 576

Query: 320 CKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
              G L+ A ++F  M + + +   T  Y  +IN F     +    +L  EM   GC  D
Sbjct: 577 ANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPD 636

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+ +++ G C  G  +     L ++   G   +  ++  V+N  C +  + +A++++ 
Sbjct: 637 TYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIH 696

Query: 439 LMLCRGFLPHYATS 452
            M+  G +P    S
Sbjct: 697 FMVHNGIVPEVVNS 710


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 179/364 (49%), Gaps = 70/364 (19%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +N +I   C RG +++A ++++EM++     PN  TY T+I G CK GR  EA+
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD--------------------------- 291
           ++F+EM++K ++ P+A+ YN LI G+C  GK+D                           
Sbjct: 242 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 301

Query: 292 --------RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE--------------------- 322
                    A +++E M   G   +VF Y  L+NG CKE                     
Sbjct: 302 LFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 361

Query: 323 --------------GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                         G++QE  ++FDE     ++PD + Y  LIN    +G +D A E++ 
Sbjct: 362 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 421

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM+++    D VT+N ++ GLC  G+++EA  +++++   GI  +  +Y  +++    KG
Sbjct: 422 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 481

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +++ A+ +   M+ +GF P   T N L+  LCK G  +DA   +  +VE G  P+  ++ 
Sbjct: 482 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 541

Query: 489 LLVE 492
            L+E
Sbjct: 542 SLIE 545



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 162/373 (43%), Gaps = 40/373 (10%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++   I+        Q AL+I   + E+ G   N  TY T++    +  + +   
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL-- 173
            V  +M  +     E +  N +     C   +    + ++   + R      A    L  
Sbjct: 242 KVFDEMLTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVH 300

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
            L ++    +  +   +   + L L  +   +NILI  HCK G ++ A E+ + M +  +
Sbjct: 301 ALFMDGRGTEAYELVEEMGGKGLAL--DVFTYNILINGHCKEGNVKKALEIFENMSRRGV 358

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMV---------------------------- 265
               ++TY++LI  L K G+ +E  +LF+E V                            
Sbjct: 359 R-ATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 417

Query: 266 ------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
                  K +I PD +TYN L+ G C  G+VD A+K+++ M   G  P++  Y TL++G+
Sbjct: 418 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 477

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             +G +++A  + +EM N    P  + Y  LI   C+ G+ D+A  ++KEM E G   D 
Sbjct: 478 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 537

Query: 380 VTFNIILGGLCRE 392
            T+  ++ GL  E
Sbjct: 538 STYISLIEGLTTE 550



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 6/182 (3%)

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +F +M    L   T  +  ++   C AG+   ALELL++M     + + VT+N ++ G C
Sbjct: 141 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFC 196

Query: 391 REGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PH 448
             G+++ AL ++ ++    GI  N+ +Y  V++  C+ G +++A+++   ML +G + P 
Sbjct: 197 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 256

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
               N L+   C  G  + A +    +VE G      ++ LLV  +    +   A+EL++
Sbjct: 257 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 316

Query: 509 EL 510
           E+
Sbjct: 317 EM 318


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 158/268 (58%), Gaps = 13/268 (4%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   FN LI   CK G L+ A +VL EM++S  +  NL+TY+TLI+GL   GR  EA+
Sbjct: 86  KPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFA-ANLVTYNTLINGLSSAGRSGEAV 144

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMN 317
            + + M +     PD  TYN +I GFC+ G++DRA   +E MK   GC+P+ F Y+ L+N
Sbjct: 145 LVMQGMTTT----PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPD----TIGYTTLINCFCRAGRVDEALELLKEMKER 373
           G CK   L++A E+  EM   + + D     + + TL++ +C+A  +D A ELL  M E 
Sbjct: 201 GLCKSSNLRKADELLQEM---IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  D+VT++ I+ GLCR G +++   +LEK+   G   +  +Y +++   C+ G++ +A
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCK 461
             L++ ML  G  P+  T + +   LCK
Sbjct: 318 CRLVKRMLEDGCTPNAVTYSLVFDGLCK 345



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 179/342 (52%), Gaps = 9/342 (2%)

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           + ++  A + L+   Q   + P   ++N  +   CK G +  A EV+K MK      P++
Sbjct: 31  AGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACK-PDV 89

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +T++TLI GLCK GR  EA ++ +EM  +     + +TYN LI+G    G+   A  +M+
Sbjct: 90  VTFNTLIAGLCKAGRLDEAQQVLDEM-ERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ 148

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRA 357
            M      P+   Y  +++GFCK G++  A    +EMK      PDT  Y+ LIN  C++
Sbjct: 149 GMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKS 205

Query: 358 GRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
             + +A ELL+EM  R  C A +V FN ++ G C+   ++ A  +L  +   G   +  +
Sbjct: 206 SNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVT 265

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C+ G+++K   LL  M+ RG  P   T   L+  LCKAG   +A   +  ++
Sbjct: 266 YSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRML 325

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           E G  P + +++L+ + +C+  KL  A +LL    I++ G I
Sbjct: 326 EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTS--IRDKGRI 365



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 177/360 (49%), Gaps = 6/360 (1%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E Q A+++   + +Q G     + Y   +  L +  K      V++ M    CK     F
Sbjct: 33  ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTF 92

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             L+         +   ++  ++     E+    A     N LI                
Sbjct: 93  NTLIAGLCKAGRLDEAQQVLDEM-----ERSGFAANLVTYNTLINGLSSAGRSGEAVLVM 147

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q +   P+T  +N +I   CK G ++ A+  L+EMK+     P+  TYS LI+GLCK+  
Sbjct: 148 QGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            R+A EL +EM+ +       + +N L+DG+C+   +DRA++++  M  +GC P+V  Y+
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T+++G C+ G + +   + ++M +   KPD + YT L+   C+AG++ EA  L+K M E 
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  + VT++++  GLC+  K++ A  +L  +   G   +  ++  +L  S +K  L++A
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL-LSVKKRLLDRA 386



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 173/310 (55%), Gaps = 8/310 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           + +L++ HC  G L++A ++L+EM++     P    Y+  +  LCK+G+  EA+E+ + M
Sbjct: 21  YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80

Query: 265 VSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
             KD    PD +T+N LI G C+ G++D A+++++ M+ +G   N+  Y TL+NG    G
Sbjct: 81  --KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCKADIVTF 382
           +  EA  V   M+     PDT  Y  +I+ FC++G +D A   L+EMK+R GC  D  T+
Sbjct: 139 RSGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 383 NIILGGLCREGKIEEALGML-EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +I++ GLC+   + +A  +L E +       +  ++  +++  C+  +L++A ELL  ML
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P   T + ++  LC+ G  +     L  +V  G KP+  ++ +LV  +C+  K++
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 502 FAFELLDELV 511
            A  L+  ++
Sbjct: 316 EACRLVKRML 325



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 112/208 (53%), Gaps = 13/208 (6%)

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           + Y  L+   C  G+LQ A ++  EM +   + P    Y   ++  C++G+V EA+E++K
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            MK+  CK D+VTFN ++ GLC+ G+++EA  +L+++   G   N  +Y  ++N     G
Sbjct: 79  NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-----MGFKPE 483
              +A+ +++ M      P   T N ++   CK+G  + A    +G +E      G  P+
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRA----YGFLEEMKQRAGCSPD 191

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
           + ++++L+  +C+   L  A ELL E++
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMI 219


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 193/399 (48%), Gaps = 43/399 (10%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           RV+E+  K       +P + A +  +N   + N++D A   L          P+T  +NI
Sbjct: 145 RVMEILEKFG-----QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNI 198

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   C RG L+ A +VL ++  S    P +ITY+ LI+     G   EA++L +EM+S+
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRA---------------------------------- 293
             + PD  TYN +I G C+ G VDRA                                  
Sbjct: 258 G-LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316

Query: 294 -KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            +K+M  M +  C+PNV  Y+ L+   C++GK++EA  +   MK   L PD   Y  LI 
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FCR GR+D A+E L+ M   GC  DIV +N +L  LC+ GK ++AL +  KL   G   
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N +SY  + +     G+  +A+ ++  M+  G  P   T N ++  LC+ GM ++A   L
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             +    F P   ++ +++   C+  ++  A  +L+ +V
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 176/316 (55%), Gaps = 6/316 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLK--EMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           LKP+   +N +I+  CK G ++ AFE+++  E+K  +   P++I+Y+ L+  L   G++ 
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE---PDVISYNILLRALLNQGKWE 315

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E  +L  +M S ++  P+ +TY++LI   CR GK++ A  +++ MK  G  P+ ++Y  L
Sbjct: 316 EGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +  FC+EG+L  A E  + M +    PD + Y T++   C+ G+ D+ALE+  ++ E GC
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  ++N +   L   G    AL M+ ++  +GI  ++ +Y  +++  C++G +++A E
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M    F P   T N +L+  CKA   EDA   L  +V  G +P   ++ +L+E I 
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554

Query: 496 RGRKLLFAFELLDELV 511
                  A EL ++LV
Sbjct: 555 FAGYRAEAMELANDLV 570



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 174/348 (50%), Gaps = 40/348 (11%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LIK       +  A  V++ ++K     P++  Y+ LI+G CK  R  +A  
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEK--FGQPDVFAYNALINGFCKMNRIDDATR 179

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + M SKD   PD +TYN++I   C  GK+D A K++  + ++ C P V  YT L+   
Sbjct: 180 VLDRMRSKD-FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             EG + EA ++ DEM +  LKPD   Y T+I   C+ G VD A E+++ ++ +GC+ D+
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298

Query: 380 VTFNIILGG-----------------------------------LCREGKIEEALGMLEK 404
           +++NI+L                                     LCR+GKIEEA+ +L+ 
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+  +  SY  ++   C++G L+ AIE L  M+  G LP     N +L  LCK G 
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418

Query: 465 AEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           A D A+ +FG L E+G  P S S+  +   +      + A  ++ E++
Sbjct: 419 A-DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 3/304 (0%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +    C+ G    +  +L+ M +   + P++I  + LI G        +A+ + E +   
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYN-PDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            Q  PD   YN LI+GFC+  ++D A ++++ M++   +P+   Y  ++   C  GKL  
Sbjct: 154 GQ--PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A +V +++ +   +P  I YT LI      G VDEAL+L+ EM  RG K D+ T+N I+ 
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C+EG ++ A  M+  L   G   +  SY I+L     +G+ E+  +L+  M      P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T + L+  LC+ G  E+A   L  + E G  P++ S+  L+   CR  +L  A E L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 508 DELV 511
           + ++
Sbjct: 392 ETMI 395



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 95/194 (48%), Gaps = 1/194 (0%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G   E+  + + M      PD I  T LI  F     + +A+ ++ E+ E+  + D+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N ++ G C+  +I++A  +L+++       +  +Y I++   C +G+L+ A+++L  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +L     P   T   L+      G  ++A   +  ++  G KP+  ++  ++  +C+   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 500 LLFAFELLDELVIK 513
           +  AFE++  L +K
Sbjct: 279 VDRAFEMVRNLELK 292



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +NI++   CK   +E A  VL+ M  +    PN  TY+ LI+G+   G   EA+E
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR-PNETTYTVLIEGIGFAGYRAEAME 564

Query: 260 LFEEMVSKDQI 270
           L  ++V  D I
Sbjct: 565 LANDLVRIDAI 575


>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
 gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01400, mitochondrial; Flags: Precursor
 gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 466

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 200/366 (54%), Gaps = 5/366 (1%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           LI  + +P  A EIF+  S+Q  F H+ +++  ++ KL R + F  +D VL +       
Sbjct: 57  LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
               IF  L+K ++   L E+VL  F+K+       P  K ++  L++L+ S++  L + 
Sbjct: 117 LTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNF-TPQPKHLNRILDVLV-SHRGYLQKA 174

Query: 188 FLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
           F  + +  L  + PNT  +N+L++  C    L  A+++  +M +  +  P++ +Y  LI 
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV-VPDVDSYKILIQ 233

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G C+ G+   A+EL ++M++K   +PD L+Y  L++  CR  ++  A K++  MK  GCN
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKG-FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ +Y T++ GFC+E +  +A++V D+M +    P+++ Y TLI   C  G  DE  + 
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L+EM  +G        N ++ G C  GK+EEA  ++E +  +G  L+  ++ +V+   C 
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412

Query: 427 KGELEK 432
           + E EK
Sbjct: 413 EDESEK 418



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 35/243 (14%)

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G + +A ++ +  + +G  PN  +Y  LM  FC    L  A ++F +M    + PD   Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228

Query: 348 TTLINCFCRAGRVDEALELLKE-----------------------------------MKE 372
             LI  FCR G+V+ A+ELL +                                   MK 
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +GC  D+V +N ++ G CRE +  +A  +L+ +  +G   N  SYR ++   C +G  ++
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             + L  M+ +GF PH++ SN L+   C  G  E+A   +  +++ G    SD+W +++ 
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408

Query: 493 LIC 495
           LIC
Sbjct: 409 LIC 411



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 13/192 (6%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLES 220
           P   + +T LN L    Q+  A   L      ++LK   P+   +N +I   C+      
Sbjct: 258 PDRLSYTTLLNSLCRKTQLREAYKLL----CRMKLKGCNPDLVHYNTMILGFCREDRAMD 313

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A +VL +M  +  S PN ++Y TLI GLC  G F E  +  EEM+SK    P     N L
Sbjct: 314 ARKVLDDMLSNGCS-PNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG-FSPHFSVSNCL 371

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           + GFC  GKV+ A  ++E +  NG   +   +  ++   C E + ++ K   ++     +
Sbjct: 372 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDA----V 427

Query: 341 KPDTIGYTTLIN 352
           K +  G T +++
Sbjct: 428 KEEITGDTRIVD 439


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 179/315 (56%), Gaps = 5/315 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N ++  +C  G L++A  ++ +M     SY    TY+TLI GLC  GR   A+
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSY----TYNTLIRGLCGRGRTGNAL 176

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + ++M+ +  + PD +TY +L++  C+     +A K+++ M+  GC P++  Y  ++NG
Sbjct: 177 VVLDDMLRRGCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+EG++ +A E    + +   +P+T+ Y  ++   C A R ++A +L+ EM ++G   +
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPN 295

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VTFN+++  LCR G +E A+ +L+++   G   N  SY  +L+  C++ ++++A+  + 
Sbjct: 296 VVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 355

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           LM+ RG  P   + N LL  LC+ G  + A   L  L + G  P   S+  +++ + +  
Sbjct: 356 LMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 415

Query: 499 KLLFAFELLDELVIK 513
           K   A ELL+E+V K
Sbjct: 416 KTKEALELLNEMVTK 430



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 183/318 (57%), Gaps = 6/318 (1%)

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           + Q+D A+  +      + ++P++  +N LI+  C RG   +A  VL +M + +   P++
Sbjct: 137 TGQLDAARRLV----ADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLR-RGCVPDV 191

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +TY+ L++  CK   +++A++L +EM +K    PD +TYNV+++G C+ G+VD A + ++
Sbjct: 192 VTYTILLEATCKRSGYKQAMKLLDEMRAKG-CAPDIITYNVVVNGICQEGRVDDAIEFLK 250

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            + ++GC PN  +Y  ++ G C   + ++A+++  EM      P+ + +  LI+  CR G
Sbjct: 251 SLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRG 310

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            V+ A+E+L ++ + GC  + +++N IL   C++ K++ A+  +E +   G Y +  SY 
Sbjct: 311 LVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYN 370

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +L   C+ GE++ A+ELL  +  +G  P   + N ++  L KAG  ++A   L  +V  
Sbjct: 371 TLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTK 430

Query: 479 GFKPESDSWALLVELICR 496
           G +P+  +++ +   +CR
Sbjct: 431 GLQPDIITYSTISSGLCR 448



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 200/379 (52%), Gaps = 12/379 (3%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           ++ TY T++  L    +      VL  M    C      +  L++     S +++ +++ 
Sbjct: 155 DSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLL 214

Query: 154 HKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
            ++    R K   P +   +  +N + +  +VD A  FLK    H   +PNT  +NI++K
Sbjct: 215 DEM----RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSH-GCEPNTVSYNIVLK 269

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
             C     E A +++ EM  SQ  YP N++T++ LI  LC+ G    A+E+ ++ + K  
Sbjct: 270 GLCTAERWEDAEKLMAEM--SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ-IPKYG 326

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P++L+YN ++  FC+  K+DRA   +E M + GC P++ +Y TL+   C+ G++  A 
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+  ++K+    P  I Y T+I+   +AG+  EALELL EM  +G + DI+T++ I  GL
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           CRE +IEEA+    K+   GI  N   Y  +L   C++ E   AI+L   M+  G +P+ 
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506

Query: 450 ATSNELLVRLCKAGMAEDA 468
           +T   L+  L   G+ ++A
Sbjct: 507 STYTILIEGLTYEGLVKEA 525



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 168/311 (54%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+++   C+ G ++ A E LK +  S    PN ++Y+ ++ GLC   R+ +A +
Sbjct: 224 PDIITYNVVVNGICQEGRVDDAIEFLKSLP-SHGCEPNTVSYNIVLKGLCTAERWEDAEK 282

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM S+    P+ +T+N+LI   CR G V+ A ++++ +   GC PN  +Y  +++ F
Sbjct: 283 LMAEM-SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAF 341

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ K+  A    + M +    PD + Y TL+   CR G VD A+ELL ++K++GC   +
Sbjct: 342 CKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 401

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++ GL + GK +EAL +L ++   G+  +  +Y  + +  C++  +E+AI     
Sbjct: 402 ISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +   G  P+    N +L+ LCK     +A      ++  G  P   ++ +L+E +     
Sbjct: 462 VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGL 521

Query: 500 LLFAFELLDEL 510
           +  A ELL EL
Sbjct: 522 VKEARELLGEL 532



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 142/281 (50%), Gaps = 17/281 (6%)

Query: 236 PNLITYSTL----IDGLCKNGRFREAIELFEEMVSKDQILPDALTY--NVLIDGFCRGGK 289
           PN + +  +    + GL + G   EA+ L E M   +   P A       LI   C  G+
Sbjct: 53  PNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLE---PSAAPGPCAALIKKLCASGR 109

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
              A++++       C P+V  Y  ++ G+C  G+L  A+ +  +M    ++PD+  Y T
Sbjct: 110 TAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNT 161

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI   C  GR   AL +L +M  RGC  D+VT+ I+L   C+    ++A+ +L+++   G
Sbjct: 162 LIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG 221

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
              +  +Y +V+N  CQ+G ++ AIE L+ +   G  P+  + N +L  LC A   EDA 
Sbjct: 222 CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAE 281

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             +  + + G+ P   ++ +L+  +CR   +  A E+LD++
Sbjct: 282 KLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 130/259 (50%), Gaps = 39/259 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKK----------------------------- 230
           PN   FN+LI   C+RG +E A EVL ++ K                             
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 353

Query: 231 -----SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
                S+  YP++++Y+TL+  LC+ G    A+EL  ++  K    P  ++YN +IDG  
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG-CTPVLISYNTVIDGLT 412

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + GK   A +++  M   G  P++  Y+T+ +G C+E +++EA   F ++++  ++P+T+
Sbjct: 413 KAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTV 472

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  ++   C+      A++L   M   GC  +  T+ I++ GL  EG ++EA  +L +L
Sbjct: 473 LYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532

Query: 406 WYDGIY----LNKASYRIV 420
              G+     +NKA+ R++
Sbjct: 533 CSRGVVSKGLINKAAIRLL 551


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 187/355 (52%), Gaps = 4/355 (1%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F +L+  + + +  E  + +F +I  +   KP++   +T +  L ++  ++ A       
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
             +   +PN   +N L+   C+ G    A  +L++M K ++  PN+IT++ LID   K G
Sbjct: 215 GTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE-PNVITFTALIDAFVKVG 272

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EA EL+  M+    + PD  TY  LI+G C  G +D A+++   M+ NGC PN   Y
Sbjct: 273 KLMEAKELYNVMIQM-SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TTL++GFCK  ++++  ++F EM    +  +TI YT LI  +C  GR D A E+  +M  
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           R    DI T+N++L GLC  GK+E+AL + E +    + +N  +Y I++   C+ G++E 
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           A +L   +  +G  P+  T   ++   C+ G+  +A      + E GF P    +
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 179/336 (53%), Gaps = 7/336 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLES 220
           +P L   ++ LN     N+++ A   +   +Q L +  KPN   +  LI+  CK   L  
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDA---IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+  +M  +  S PN++TY+ L+ GLC+ GR+ +A  L  +M+ K +I P+ +T+  L
Sbjct: 207 AVELFNQMGTNG-SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM-KRRIEPNVITFTAL 264

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           ID F + GK+  AK++   M      P+VF Y +L+NG C  G L EA+++F  M+    
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P+ + YTTLI+ FC++ RV++ +++  EM ++G  A+ +T+ +++ G C  G+ + A  
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +  ++       +  +Y ++L+  C  G++EKA+ +   M  R    +  T   ++  +C
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           K G  EDA      L   G KP   ++  ++   CR
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 143/258 (55%), Gaps = 3/258 (1%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R +P++   +  ++  ++  ++  A+       Q + + P+   +  LI   C  G L+ 
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ-MSVYPDVFTYGSLINGLCMYGLLDE 311

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A ++   M+++   YPN + Y+TLI G CK+ R  + +++F EM S+  ++ + +TY VL
Sbjct: 312 ARQMFYLMERNG-CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM-SQKGVVANTITYTVL 369

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I G+C  G+ D A+++   M +    P++  Y  L++G C  GK+++A  +F+ M+   +
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
             + + YT +I   C+ G+V++A +L   +  +G K +++T+  ++ G CR G I EA  
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489

Query: 401 MLEKLWYDGIYLNKASYR 418
           + +K+  DG   N++ Y+
Sbjct: 490 LFKKMKEDGFLPNESVYK 507



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 184/404 (45%), Gaps = 49/404 (12%)

Query: 150 LEMFHK-IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           L++F + +H  +R  PS+   +  L+++ + N+ D+  +  +   Q L + P  C  NI+
Sbjct: 68  LDLFTRMVH--SRPLPSIIDFTRLLSVIAKMNRYDVVISLFE-QMQILGIPPLLCTCNIV 124

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +   C       A   L +M K     P+L+T+++L++G C   R  +AI LF++++   
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFE-PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC-------- 320
              P+ +TY  LI   C+   ++ A ++   M  NG  PNV  Y  L+ G C        
Sbjct: 184 -FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 321 ---------------------------KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
                                      K GKL EAKE+++ M    + PD   Y +LIN 
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C  G +DEA ++   M+  GC  + V +  ++ G C+  ++E+ + +  ++   G+  N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y +++   C  G  + A E+   M  R   P   T N LL  LC  G  E A +   
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM--- 419

Query: 474 GLVEMGFKPESD----SWALLVELICRGRKLLFAFELLDELVIK 513
            + E   K E D    ++ ++++ +C+  K+  AF+L   L  K
Sbjct: 420 -IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 35/223 (15%)

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG--------- 374
           +  +A ++F  M +    P  I +T L++   +  R D  + L ++M+  G         
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 375 ------------CKA--------------DIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
                       C+A              D+VTF  +L G C   +IE+A+ + +++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N  +Y  ++   C+   L  A+EL   M   G  P+  T N L+  LC+ G   DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           A  L  +++   +P   ++  L++   +  KL+ A EL + ++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 195/381 (51%), Gaps = 4/381 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            +G+     T+  I++ L +  K  A    +++M    C+     +  ++       L  
Sbjct: 202 SRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVN 261

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             +++F+ +  I    P++   ++ +  +  S Q   A    K       +KP+   F+I
Sbjct: 262 EAVDLFYHMRSIGIS-PTVVTYNSLIYGMCNSGQWKQASILFK-EMLEWNMKPDVVTFSI 319

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   CK G +  A  V  +M +  M  P+++TYS+LI G+CK+  ++E+  L  EM+S+
Sbjct: 320 LVDALCKEGVVLEALSVFGKMIQIAME-PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + I PD +T+++ +D FC+ G V  A+ I+  M   G  PNV  Y +LM+G+C   ++ E
Sbjct: 379 N-IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDE 437

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A++VFD M N    PD + Y  LI  +C++ R+DEA +L  EM  +G   + +T   ++ 
Sbjct: 438 ARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLIS 497

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G+   A  + +K+   G   +  +Y  +L+  C+ G L++A+ L   +      P
Sbjct: 498 GLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKP 557

Query: 448 HYATSNELLVRLCKAGMAEDA 468
           ++     LL  +CKAG  EDA
Sbjct: 558 NHVICKILLGGMCKAGKLEDA 578



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 188/353 (53%), Gaps = 5/353 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P + + S  ++ L ++  V+ A + L Y  + + + P    +N LI   C  G  + A 
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVD-LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQAS 299

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + KEM +  M  P+++T+S L+D LCK G   EA+ +F +M+ +  + PD +TY+ LI 
Sbjct: 300 ILFKEMLEWNMK-PDVVTFSILVDALCKEGVVLEALSVFGKMI-QIAMEPDIVTYSSLIH 357

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+      +  ++  M +    P+V  ++  ++ FCK+G + EA+ + + M    L+P
Sbjct: 358 GVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRP 417

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y +L++ +C   ++DEA ++   M  +GC  D++++NI++ G C+  +I+EA  + 
Sbjct: 418 NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLF 477

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +++ + G+  N  ++  +++  CQ G    A EL + M   G  P   T + LL   CK 
Sbjct: 478 DEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKH 537

Query: 463 GMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           G   D A+ALF  L +   KP      +L+  +C+  KL  A EL   L I+E
Sbjct: 538 GHL-DEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEE 589



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 170/315 (53%), Gaps = 2/315 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  KP+   FN LI   C  G +  A E L  +  S+   P + T++ +++GLCK G+  
Sbjct: 168 LGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIM-SRGYQPTVYTHTMIVNGLCKIGKTS 226

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            AI   ++MV  D   P+ ++Y+++ID  C+   V+ A  +   M++ G +P V  Y +L
Sbjct: 227 AAIVWMKKMVELD-CEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSL 285

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C  G+ ++A  +F EM  + +KPD + ++ L++  C+ G V EAL +  +M +   
Sbjct: 286 IYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAM 345

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + DIVT++ ++ G+C+    +E+  +L ++    I  +  ++ I ++  C+KG + +A  
Sbjct: 346 EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQS 405

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           ++ LM+ RG  P+  T N L+   C     ++A      +V  G  P+  S+ +L++  C
Sbjct: 406 IINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYC 465

Query: 496 RGRKLLFAFELLDEL 510
           +  ++  A +L DE+
Sbjct: 466 KSERIDEAKQLFDEM 480



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 161/309 (52%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
             ILI   C    +   F VL ++ K     P++IT++TLI+GLC  GR  EA+E  + +
Sbjct: 142 LTILINCLCHLHLVGLGFSVLGKIFKLGFK-PSIITFNTLINGLCIEGRIVEAMEQLDYI 200

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +S+    P   T+ ++++G C+ GK   A   M+ M    C P V +Y+ +++  CK   
Sbjct: 201 MSRGY-QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRL 259

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA ++F  M++  + P  + Y +LI   C +G+  +A  L KEM E   K D+VTF+I
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSI 319

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LC+EG + EAL +  K+    +  +  +Y  +++  C+    +++  LL  ML R 
Sbjct: 320 LVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRN 379

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T +  +   CK GM  +A   +  ++E G +P   ++  L++  C   ++  A 
Sbjct: 380 IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEAR 439

Query: 505 ELLDELVIK 513
           ++ D +V K
Sbjct: 440 KVFDIMVNK 448



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 122/217 (56%), Gaps = 3/217 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +   S  +++  +   V  AQ+ +    +   L+PN   +N L+  +C    ++ A 
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIER-GLRPNVVTYNSLMDGYCLHSQMDEAR 439

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           +V   M     + P++++Y+ LI G CK+ R  EA +LF+EM S   + P+++T+  LI 
Sbjct: 440 KVFDIMVNKGCA-PDVLSYNILIKGYCKSERIDEAKQLFDEM-SHKGLTPNSITHTTLIS 497

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ G+   AK++ + M ++GC P++  Y+TL++GFCK G L EA  +F+ +K   LKP
Sbjct: 498 GLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKP 557

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           + +    L+   C+AG++++A EL   +     + D+
Sbjct: 558 NHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 151/310 (48%), Gaps = 7/310 (2%)

Query: 206 NILIKHHCKRGTL---ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
           N  ++  CK G+    + A     +M      +P +  ++ L+  L +   +   + ++ 
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMN-PFPCITQFNQLLAALVRMKHYDSVVSIYR 128

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           +M     +     T  +LI+  C    V     ++  +   G  P++  + TL+NG C E
Sbjct: 129 KM-EFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIE 187

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G++ EA E  D + +   +P    +T ++N  C+ G+   A+  +K+M E  C+ ++V++
Sbjct: 188 GRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSY 247

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           +II+  LC+   + EA+ +   +   GI     +Y  ++   C  G+ ++A  L + ML 
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLL 501
               P   T + L+  LCK G+  + A+++FG ++++  +P+  +++ L+  +C+     
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLE-ALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 502 FAFELLDELV 511
            +  LL+E++
Sbjct: 367 ESSTLLNEML 376


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 158/268 (58%), Gaps = 13/268 (4%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   FN LI   CK G L+ A +VL EM++S  +  NL+TY+TLI+GL   GR  EA+
Sbjct: 86  KPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFA-ANLVTYNTLINGLSSAGRSGEAV 144

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMN 317
            + + M +     PD  TYN +I GFC+ G++DRA   +E MK   GC+P+ F Y+ L+N
Sbjct: 145 LVMQGMTTT----PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPD----TIGYTTLINCFCRAGRVDEALELLKEMKER 373
           G CK   L++A E+  EM   + + D     + + TL++ +C+A  +D A ELL  M E 
Sbjct: 201 GLCKSSNLRKADELLQEM---IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  D+VT++ I+ GLCR G +++   +LEK+   G   +  +Y +++   C+ G++ +A
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCK 461
             L++ ML  G  P+  T + +   LCK
Sbjct: 318 CRLVKRMLEDGCTPNAVTYSLVFDGLCK 345



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 179/342 (52%), Gaps = 9/342 (2%)

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           + ++  A + L+   Q   + P   ++N  +   CK G +  A EV+K MK      P++
Sbjct: 31  AGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACK-PDV 89

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +T++TLI GLCK GR  EA ++ +EM  +     + +TYN LI+G    G+   A  +M+
Sbjct: 90  VTFNTLIAGLCKAGRLDEAQQVLDEM-ERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ 148

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRA 357
            M      P+   Y  +++GFCK G++  A    +EMK      PDT  Y+ LIN  C++
Sbjct: 149 GMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKS 205

Query: 358 GRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
             + +A ELL+EM  R  C A +V FN ++ G C+   ++ A  +L  +   G   +  +
Sbjct: 206 SNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVT 265

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C+ G+++K   LL  M+ RG  P   T   L+  LCKAG   +A   +  ++
Sbjct: 266 YSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRML 325

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           E G  P + +++L+ + +C+  KL  A +LL    I++ G +
Sbjct: 326 EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTS--IRDKGRV 365



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 177/360 (49%), Gaps = 6/360 (1%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E Q A+++   + +Q G     + Y   +  L +  K      V++ M    CK     F
Sbjct: 33  ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTF 92

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             L+         +   ++  ++     E+    A     N LI                
Sbjct: 93  NTLIAGLCKAGRLDEAQQVLDEM-----ERSGFAANLVTYNTLINGLSSAGRSGEAVLVM 147

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q +   P+T  +N +I   CK G ++ A+  L+EMK+     P+  TYS LI+GLCK+  
Sbjct: 148 QGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            R+A EL +EM+ +       + +N L+DG+C+   +DRA++++  M  +GC P+V  Y+
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T+++G C+ G + +   + ++M +   KPD + YT L+   C+AG++ EA  L+K M E 
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  + VT++++  GLC+  K++ A  +L  +   G   +  ++  +L  S +K  L++A
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL-LSVKKRLLDRA 386



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 173/310 (55%), Gaps = 8/310 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           + +L++ HC  G L++A ++L+EM++     P    Y+  +  LCK+G+  EA+E+ + M
Sbjct: 21  YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80

Query: 265 VSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
             KD    PD +T+N LI G C+ G++D A+++++ M+ +G   N+  Y TL+NG    G
Sbjct: 81  --KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCKADIVTF 382
           +  EA  V   M+     PDT  Y  +I+ FC++G +D A   L+EMK+R GC  D  T+
Sbjct: 139 RSGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 383 NIILGGLCREGKIEEALGML-EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +I++ GLC+   + +A  +L E +       +  ++  +++  C+  +L++A ELL  ML
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P   T + ++  LC+ G  +     L  +V  G KP+  ++ +LV  +C+  K++
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 502 FAFELLDELV 511
            A  L+  ++
Sbjct: 316 EACRLVKRML 325



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 112/208 (53%), Gaps = 13/208 (6%)

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           + Y  L+   C  G+LQ A ++  EM +   + P    Y   ++  C++G+V EA+E++K
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            MK+  CK D+VTFN ++ GLC+ G+++EA  +L+++   G   N  +Y  ++N     G
Sbjct: 79  NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-----MGFKPE 483
              +A+ +++ M      P   T N ++   CK+G  + A    +G +E      G  P+
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRA----YGFLEEMKQRAGCSPD 191

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
           + ++++L+  +C+   L  A ELL E++
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMI 219


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 239/489 (48%), Gaps = 41/489 (8%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           S    + L++ + +   AL +F   S Q  ++ + + +  +L +LAR   F+++  +LRQ
Sbjct: 58  SPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQ 117

Query: 121 MTYETCKFHEGIFLNLMKHFSNCS-LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           M        E  FL  ++ ++    LH  +  +F  +      KP  +  +  L+LL+++
Sbjct: 118 MHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKA 177

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-----KKSQMS 234
           N++ L +  L        + P+   FNILI+  CK   L  A  +L++M     +  + +
Sbjct: 178 NKLKLVET-LHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKT 236

Query: 235 YPNL-----------------------------ITYSTLIDGLCKNGRFREAIELFEEMV 265
           +  L                             ++ + L++GLCK GR  EA+    E  
Sbjct: 237 FTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE-- 294

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            ++   PD +T+N L++G CR G + +  ++M+FM   G   +V+ Y +L++G CK G++
Sbjct: 295 -EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI 353

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA E+   M +   +P+T+ Y TLI   C+   V+ A EL + +  +G   D+ TFN +
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC     E A+ + E++   G   ++ +Y I++   C +  L++A+ LL+ M   G 
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAF 504
             +    N L+  LCK     DA   +F  +EM G    S ++  L+  +C+ +++  A 
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAE-DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAA 532

Query: 505 ELLDELVIK 513
           +L+D+++++
Sbjct: 533 QLMDQMIME 541



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 7/418 (1%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E    + E++GF  +  T+  +++ L R    +    ++  M  +  +     + +L+  
Sbjct: 287 EALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISG 346

Query: 140 FSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
                  +  +E+ H  H ++R+ +P+    +T +  L + N V+ A    +       L
Sbjct: 347 LCKLGEIDEAVEILH--HMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVL 404

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+ C FN LI+  C     E A E+ +EMK+     P+  TYS LI+ LC   R +EA+
Sbjct: 405 -PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCD-PDEFTYSILIESLCSERRLKEAL 462

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L +EM        + + YN LIDG C+  +V  A+ I + M+  G + +   Y TL+NG
Sbjct: 463 MLLKEM-ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLING 521

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK  +++EA ++ D+M    LKPD   YTT++  FC+ G +  A ++++ M   GC+ D
Sbjct: 522 LCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPD 581

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           IVT+  ++GGLC+ G+++ A  +L  +   G+ L   +Y  V+   C++   ++A+ L R
Sbjct: 582 IVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFR 641

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL-FGLVEMGFKPESDSWALLVELIC 495
            M+ +G  P   T   +   LC  G     A+     ++E G  PE  S+  L E +C
Sbjct: 642 EMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 168/309 (54%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   CK G ++ A E+L  M  S+   PN +TY+TLI  LCK      A EL   +
Sbjct: 340 YNSLISGLCKLGEIDEAVEILHHMV-SRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            SK  +LPD  T+N LI G C     + A ++ E MK  GC+P+ F Y+ L+   C E +
Sbjct: 399 TSKG-VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERR 457

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+EA  +  EM+      + + Y TLI+  C+  RV +A ++  +M+  G     VT+N 
Sbjct: 458 LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNT 517

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC+  ++EEA  +++++  +G+  +K +Y  +L + CQ+G++++A ++++ M   G
Sbjct: 518 LINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNG 577

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T   L+  LCKAG  + A+  L  +   G      ++  +++ +C+ ++   A 
Sbjct: 578 CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAM 637

Query: 505 ELLDELVIK 513
            L  E++ K
Sbjct: 638 RLFREMMEK 646



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 135/285 (47%), Gaps = 11/285 (3%)

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG----GK 289
           ++P++  +  L+  L + G F   + L  +M S  +I  D  T+ + ++ +        +
Sbjct: 90  AHPSV--FHELLRQLARAGSFDSMLTLLRQMHSS-KIPVDESTFLIFLETYATSHHLHAE 146

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           ++    +ME  ++    P+   Y   ++   K  KL+  + +  +M    + PD   +  
Sbjct: 147 INPLFLLME--RDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNI 204

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI   C+A ++  A+ +L++M   G + D  TF  ++ G   E  +E AL + E +   G
Sbjct: 205 LIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESG 264

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
             L   S  +++N  C++G +E+A+  +      GF P   T N L+  LC+ G  +   
Sbjct: 265 CELTSVSVNVLVNGLCKEGRIEEALRFIYEE--EGFCPDQVTFNALVNGLCRTGHIKQGL 322

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             +  ++E GF+ +  ++  L+  +C+  ++  A E+L  +V ++
Sbjct: 323 EMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD 367


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 216/458 (47%), Gaps = 40/458 (8%)

Query: 93  HNNATYATILDKLARYKKFEAVDAVLR-QMTYETCKFHEGIFLNLMKHFSNCSLHERVLE 151
           HNN T   +L  L + ++      + R ++  + C  +   +  L+  F      ER  +
Sbjct: 67  HNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQ 126

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +  ++       P +   S+ +  L  +  +  A   ++Y  + +   P++ +FNIL+  
Sbjct: 127 LLAEMKE-RGHSPDVVTHSSIVQALCNTGNLSRA---MQYFRESVECAPDSVLFNILVHG 182

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK---- 267
            CK   L  A ++++EM +  +  P+++TY++LIDGLCK+ R  EA +L E MV +    
Sbjct: 183 LCKANQLSEARQMIEEMSERGI-VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRP 241

Query: 268 ---------------------DQIL---------PDALTYNVLIDGFCRGGKVDRAKKIM 297
                                 Q++         PD +T+N LI GFC+  K+D+A +++
Sbjct: 242 NLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL 301

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             MK   C PN+  Y  L++G C  G+  EA E+  EM    + PD I Y +LI  FCR 
Sbjct: 302 HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRN 361

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            ++++A ++   M ERG   D +++  +   L +  + +EA  +L+ ++  G   N  ++
Sbjct: 362 FQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTF 421

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++   C    L++A  LL +M   G  P  +T   L+  LCKAG  +DA   L  +V 
Sbjct: 422 NSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVS 481

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
            G +P   S   +V  + R  K   A    D++V  ES
Sbjct: 482 EGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAES 519



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 181/342 (52%), Gaps = 13/342 (3%)

Query: 182 VDLAQNFLKYSNQHLRLKP--NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           VD++  F ++  +  R +   N    N L++   K      A+++ ++    Q    N I
Sbjct: 47  VDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHI 106

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY+TLI G CK G    A +L  EM  +    PD +T++ ++   C  G + RA +   F
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHS-PDVVTHSSIVQALCNTGNLSRAMQY--F 163

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
            ++  C P+   +  L++G CK  +L EA+++ +EM    + PD + Y +LI+  C++ R
Sbjct: 164 RESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR 223

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           ++EA +LL+ M +R  + ++VT+N ++ G C+ G    A  ++E++   G + +  ++  
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283

Query: 420 VLNFSCQKGELEKAIELLRLM---LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           +++  CQK +++KA E+L LM   LC    P+  T N L+  LC AG A +A   L  + 
Sbjct: 284 LISGFCQKSKIDKACEVLHLMKKGLCA---PNLVTYNVLISGLCDAGRANEACELLSEMD 340

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
             G  P+  ++  L+ + CR  ++  AF++ + +V  E G I
Sbjct: 341 GRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMV--ERGVI 380



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 178/332 (53%), Gaps = 5/332 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   ++ ++ L +S +++ A+  L+   +  +++PN   +N LI  +CK G    A +
Sbjct: 206 PDVVTYNSLIDGLCKSYRMEEARQLLETMVKR-KVRPNLVTYNTLIYGYCKTGCTGLAHQ 264

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +++ M +S  ++P+++T+++LI G C+  +  +A E+   ++ K    P+ +TYNVLI G
Sbjct: 265 LIERMIQSG-THPDVVTFNSLISGFCQKSKIDKACEVLH-LMKKGLCAPNLVTYNVLISG 322

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C  G+ + A +++  M   G  P++  Y +L+  FC+  ++++A ++ + M    + PD
Sbjct: 323 LCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPD 382

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y TL     ++ R DEA  LL  M + G   ++ TFN ++ GLC   +++EA  +L 
Sbjct: 383 GISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLA 442

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G     ++Y +++   C+ G ++ A E+L +M+  G  P  ++S  ++  L + G
Sbjct: 443 VMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREG 502

Query: 464 MAEDAAIALFGLVEMGFKPESD-SWALLVELI 494
             +D A+  F  V        D S+  L+E +
Sbjct: 503 -KQDLALHYFDQVVAAESKACDPSYQKLLEFV 533


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 213/435 (48%), Gaps = 24/435 (5%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-------S 141
           +G   +  T+ T++  L R  +      +L +M+       E  F  LM+ F       +
Sbjct: 175 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEA 234

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHLR--L 198
              +  R+LEM               A    +N+LI    ++   ++ L Y  Q +    
Sbjct: 235 ALRVKARMLEM------------GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 282

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N  +   C+   +  A +V+  M +     P++ TY+ +++ LCKNG+  EA 
Sbjct: 283 EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD-PDVFTYNIVVNCLCKNGQLEEAK 341

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +  +MV +   LPD  T+N LI   C G +++ A  +   +   G +P+V+ +  L+N 
Sbjct: 342 GILNQMVDRG-CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK G    A  +F+EMKN    PD + Y TLI+  C  G++ +AL+LLK+M+  GC   
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            +T+N I+ GLC++ +IEEA  + +++   GI  N  ++  +++  C+  +++ A  L+ 
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLIN 520

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G  P+  T N +L   CK G  + AA  L  +   GF+ +  ++  L+  +C+  
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580

Query: 499 KLLFAFELLDELVIK 513
           +   A ++L  + IK
Sbjct: 581 RTQVALKVLRGMRIK 595



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 193/358 (53%), Gaps = 12/358 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESA 221
           P +   +  +N L ++ Q++ A+  L   NQ +     P+   FN LI   C    LE A
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGIL---NQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++ +++    +S P++ T++ LI+ LCK G    A+ LFEEM       PD +TYN LI
Sbjct: 376 LDLARQVTVKGVS-PDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLI 433

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C  GK+ +A  +++ M++ GC  +   Y T+++G CK+ +++EA+EVFD+M    + 
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            + I + TLI+  C+  ++D+A  L+ +M   G + + +T+N IL   C++G I++A  +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LE +  +G  ++  +Y  ++N  C+ G  + A+++LR M  +G  P     N +L  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL-----FAFELLDELVIKE 514
                DA      + E+G  P++ ++ ++   +CRG   +     F  E++D+  I E
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 163/342 (47%), Gaps = 2/342 (0%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L  L E    D A   L  +       P   ++  +I+     G L+    ++ EM++  
Sbjct: 45  LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREG 104

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIEL-FEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
                 + +S  +D       F +A++L   ++     I  D + YN L++    G K+ 
Sbjct: 105 HQVKLGVVHS-FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
             + +   M   G  P+V  + TLM   C+  +++ A  + +EM +  + PD   +TTL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             F   G ++ AL +   M E GC A  VT N+++ G C+ G++E+ALG +++   DG  
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            ++ +Y   +N  CQ   +  A++++ +M+  G  P   T N ++  LCK G  E+A   
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L  +V+ G  P+  ++  L+  +C G +L  A +L  ++ +K
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   +  TY TI+D L +  + E  + V  QM        +GI  N +         
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL------QGISRNAI--------- 497

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCI 204
                                  +T ++ L +  ++D A   +   NQ +   L+PN   
Sbjct: 498 ---------------------TFNTLIDGLCKDKKIDDAFGLI---NQMISEGLQPNNIT 533

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++ H+CK+G ++ A ++L+ M  +     +++TY TLI+GLCK GR + A+++   M
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEV-DVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  + P    YN ++    R   +  A  +   M   G  P+   Y  +  G C+ G 
Sbjct: 593 RIKG-MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 325 LQEAKEVFDEM 335
               KE FD M
Sbjct: 652 --PIKEAFDFM 660


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 217/423 (51%), Gaps = 7/423 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E++  + E  G+  +N +Y  ++  LA+  K +    +L +M           + +L+
Sbjct: 64  AREVYQHMVES-GYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           +  +     +    +F ++         L      L L  ++ +V  A    K   +H  
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGL-CQAGKVKDASERFKQMPKH-G 180

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +PN  ++N+L+   C  G LE A  +  EMK    S P+++TY+TL+D +CK  R  E 
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCS-PDVVTYNTLLDAVCKARRVEEG 239

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LFE M +   + P+ +T++ LI G CR G++++A ++   M   GC PN + YTTL++
Sbjct: 240 CKLFEAMRAAGYV-PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS 298

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE-RGCK 376
           G C+  K+ +A+E+F++M    + PD + Y +LI  +C+ G +DEA +L +EM    G +
Sbjct: 299 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQ 358

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             IVTFN ++ G C+ GK+  A  ++ ++   G+  +  +YRI++    +  +L++A+E+
Sbjct: 359 PTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEV 418

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE-LIC 495
            + M  + FL    +    +  LCK G  + A        + G  P  +++ +L E LI 
Sbjct: 419 YKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 478

Query: 496 RGR 498
            GR
Sbjct: 479 LGR 481



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 201/427 (47%), Gaps = 42/427 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           K    N  TY++I+  L +  K E    VL +M    C      F  +M+ F+  +  E+
Sbjct: 4   KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
             E++                      ++ES                   KP+   ++IL
Sbjct: 64  AREVYQH--------------------MVESG-----------------YKPDNVSYHIL 86

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I    K G L+ + ++L EM     + P++  YS+L+  L K  R   A  LF+EM+   
Sbjct: 87  IHGLAKIGKLDESLKILSEMVMRGQT-PSMQAYSSLVRALAKARRVDHASSLFDEMIRGG 145

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              PD L +  LI G C+ GKV  A +  + M  +GC PNV  Y  L++G C  G+L++A
Sbjct: 146 H-HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQA 204

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +F EMK+    PD + Y TL++  C+A RV+E  +L + M+  G   +++TF+ ++ G
Sbjct: 205 NTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHG 264

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LCR G++E+AL +   +   G   NK +Y  +++  C+  ++ +A EL   M      P 
Sbjct: 265 LCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD 324

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVE--MGFKPESDSWALLVELICRGRKLLFAFEL 506
               N L+   CK G + D A  L+  +    G +P   ++  L++  C+  KL  A EL
Sbjct: 325 AVAYNSLIAGYCKRG-SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 383

Query: 507 LDELVIK 513
           + E+  K
Sbjct: 384 VAEMGTK 390



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 134/239 (56%), Gaps = 3/239 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   F+ LI   C+ G LE A EV   M ++    PN  TY+TLI GLC+  +  +A E
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK-PNKYTYTTLISGLCRAEKVIQARE 311

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNG 318
           LFE+M ++  I PDA+ YN LI G+C+ G +D A+K+   M    G  P +  + TL++G
Sbjct: 312 LFEKM-TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDG 370

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FCK GKL  A E+  EM    L  D+  Y  LI    RA ++DEALE+ K+M+E+    D
Sbjct: 371 FCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLD 430

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            V+    +GGLC+ G I++A  + E     G   N  ++RI+     + G +E A +L+
Sbjct: 431 PVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 169/383 (44%), Gaps = 26/383 (6%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAI--SLIKCEKEPQ-----------CALEIFNTVSE- 87
           P ++   + V A  ++R + H +++   +I+    P            C        SE 
Sbjct: 113 PSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASER 172

Query: 88  -----QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN 142
                + G   N   Y  +L  L    + E  + +  +M   +C      +  L+     
Sbjct: 173 FKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK 232

Query: 143 CSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
               E   ++F  +       P++   ST ++ L  + +++ A      S      KPN 
Sbjct: 233 ARRVEEGCKLFEAMRAAGY-VPNVITFSTLIHGLCRTGELEKALEVFG-SMLEAGCKPNK 290

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +  LI   C+   +  A E+ ++M ++ +  P+ + Y++LI G CK G   EA +L+ 
Sbjct: 291 YTYTTLISGLCRAEKVIQARELFEKMTQACIP-PDAVAYNSLIAGYCKRGSMDEAEKLYR 349

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM     + P  +T+N LIDGFC+ GK+ RA +++  M   G   +   Y  L+ G  + 
Sbjct: 350 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRA 409

Query: 323 GKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            KL EA EV+ +M  K FLL P  +   + +   C+ G +D+A  + +  ++ G   +  
Sbjct: 410 TKLDEALEVYKQMREKKFLLDP--VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 467

Query: 381 TFNIILGGLCREGKIEEALGMLE 403
           TF I+   L + G++E+A  ++E
Sbjct: 468 TFRILSESLIKLGRVEDAQKLME 490



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 25/292 (8%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI-----------FLNLMKHFSNCSL 145
           TY T+LD + + ++ E           E CK  E +           F  L+        
Sbjct: 222 TYNTLLDAVCKARRVE-----------EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGE 270

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            E+ LE+F  +      KP+    +T ++ L  + +V  A+   +   Q   + P+   +
Sbjct: 271 LEKALEVFGSMLEAGC-KPNKYTYTTLISGLCRAEKVIQARELFEKMTQAC-IPPDAVAY 328

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N LI  +CKRG+++ A ++ +EM       P ++T++TLIDG CK G+   A EL  EM 
Sbjct: 329 NSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMG 388

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +K  +  D+ TY +LI G  R  K+D A ++ + M+      +  +  + + G CK G +
Sbjct: 389 TKG-LAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNI 447

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            +A  VF+  +     P+   +  L     + GRV++A +L++  K R   A
Sbjct: 448 DQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITA 499



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 108/211 (51%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M++     NVF Y++++    KE K +E+ +V +EM      PD   +  ++  F R+  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A E+ + M E G K D V+++I++ GL + GK++E+L +L ++   G   +  +Y  
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++    +   ++ A  L   M+  G  P      EL++ LC+AG  +DA+     + + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +P    + +L+  +C   +L  A  L  E+
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEM 211



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 74/142 (52%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M+++   A++ T++ I+  L +E K EE+  +LE++   G   +  ++  V+    +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +EKA E+ + M+  G+ P   + + L+  L K G  +++   L  +V  G  P   +++ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 490 LVELICRGRKLLFAFELLDELV 511
           LV  + + R++  A  L DE++
Sbjct: 121 LVRALAKARRVDHASSLFDEMI 142


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 242/570 (42%), Gaps = 114/570 (20%)

Query: 57  SRFISHGAAIS-------LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR-- 107
           ++F+ H A          L      P  AL  F     Q GF  +  TYA ILD LAR  
Sbjct: 36  NKFLFHAAVAEPQLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNG 95

Query: 108 -----YKKFEAVDAV-------------------LRQMTYETC--KFHEGIFLNLMKHFS 141
                Y   E V +V                    ++   E C   F++ +   ++    
Sbjct: 96  LMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLK 155

Query: 142 NCSLHERVLEMFHKIHPITRE----------KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           NC+   R+L        + RE          +P++   +T L+   +  +V  A   L  
Sbjct: 156 NCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLL-L 214

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK--------------------- 230
             Q +   PN   +N+L+      G LE A E+++EM +                     
Sbjct: 215 QMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKG 274

Query: 231 -------------SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD--------- 268
                        S+ + P L+TY+T++ GLCK GR  +A +L + MV+K+         
Sbjct: 275 QLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYN 334

Query: 269 -------------------------QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
                                     ++P  +TYN LIDG CR G +D A ++ + M  +
Sbjct: 335 TLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKH 394

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G +P+VF +T L+ GFCK G L  AKE+FDEM N  L+PD   Y T I    + G   +A
Sbjct: 395 GPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKA 454

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             + +EM  RG   D++T+N+ + GL + G ++EA  +++K+ Y+G+  +  +Y  +++ 
Sbjct: 455 FGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 514

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
               G L KA  +   ML +G  P   T   L+      G  + A +  F + E G  P 
Sbjct: 515 HLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPN 574

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++  L+  +C+ RK+  A++   E+  K
Sbjct: 575 VITYNALINGLCKVRKMDQAYKFFTEMQAK 604



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 155/298 (52%), Gaps = 3/298 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS+   +T ++ L     +D+A        +H    P+   F IL++  CK G L  A E
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKH-GPDPDVFTFTILVRGFCKLGNLPMAKE 421

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  EM    +  P+   Y T I G  K G   +A  + EEM+++    PD +TYNV IDG
Sbjct: 422 LFDEMLNRGLQ-PDRFAYITRIVGELKLGDPSKAFGMQEEMLARG-FPPDLITYNVFIDG 479

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             + G +  A ++++ M  NG  P+   YT++++     G L++A+ VF EM +  + P 
Sbjct: 480 LHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPS 539

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + YT LI+ +   GR+  A+    EM E+G   +++T+N ++ GLC+  K+++A     
Sbjct: 540 VVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFT 599

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           ++   GI  NK +Y I++N +C  G  ++A+ L + ML R   P   T + LL  L K
Sbjct: 600 EMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 201/453 (44%), Gaps = 38/453 (8%)

Query: 77  CALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL 136
            A E++N + E  G      TY T+LD   +  K +    +L QM    C  ++  +  L
Sbjct: 173 VAREVYNVMVEC-GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVL 231

Query: 137 MKHFSNCSLHERVLEMFHKI------------HPITR---EK------------------ 163
           +   S+    E+  E+  ++             P+ R   EK                  
Sbjct: 232 VNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGA 291

Query: 164 -PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
            P+L   +T +  L +  +V  A+  L        L P+   +N LI  + + G +  AF
Sbjct: 292 VPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNK-NLMPDLVSYNTLIYGYTRLGNIGEAF 350

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  E++   +  P+++TY+TLIDGLC+ G    A+ L +EM+ K    PD  T+ +L+ 
Sbjct: 351 LLFAELRFRGLV-PSVVTYNTLIDGLCRMGDLDVAMRLKDEMI-KHGPDPDVFTFTILVR 408

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GFC+ G +  AK++ + M N G  P+ F Y T + G  K G   +A  + +EM      P
Sbjct: 409 GFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPP 468

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D I Y   I+   + G + EA EL+K+M   G   D VT+  I+      G + +A  + 
Sbjct: 469 DLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVF 528

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   GI+ +  +Y ++++    +G L+ AI     M  +G  P+  T N L+  LCK 
Sbjct: 529 LEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKV 588

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
              + A      +   G  P   ++ +L+   C
Sbjct: 589 RKMDQAYKFFTEMQAKGISPNKYTYTILINENC 621



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 6/197 (3%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+ I    K G L+ A E++K+M  + +  P+ +TY+++I      G  R+A  
Sbjct: 468 PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV-PDHVTYTSIIHAHLMAGHLRKARA 526

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF--MKNNGCNPNVFNYTTLMN 317
           +F EM+SK  I P  +TY VLI  +   G++  A  I+ F  M   G +PNV  Y  L+N
Sbjct: 527 VFLEMLSKG-IFPSVVTYTVLIHSYAVRGRLKLA--ILHFFEMHEKGVHPNVITYNALIN 583

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK  K+ +A + F EM+   + P+   YT LIN  C  G   EAL L K+M +R  + 
Sbjct: 584 GLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 643

Query: 378 DIVTFNIILGGLCREGK 394
           D  T + +L  L ++ K
Sbjct: 644 DSCTHSALLKHLNKDYK 660


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 201/375 (53%), Gaps = 10/375 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  L    + +   AVL  M    C      +  L++     S +++ +++  ++
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213

Query: 157 HPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
               R+K   P +   +  +N + +  +VD A  FLK S      +PNT  +NI++K  C
Sbjct: 214 ----RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLK-SLPSYGCEPNTVSYNIVLKGLC 268

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
                E A +++ EM +     PN++T++ LI  LC+ G    A+E+ ++ + K    P+
Sbjct: 269 TAERWEDAEKLMAEMSRKGRP-PNVVTFNMLISFLCRRGLVEPAMEILDQ-IPKYGCTPN 326

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           +L+YN ++  FC+  K+DRA   +E M ++GC P++ +Y TL+   C+ G++  A E+  
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLH 386

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           ++K+    P  I Y T+I+   +AG+ +EALELL EM  +G + DI+T++ I  GLCREG
Sbjct: 387 QLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREG 446

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           +IEEA+    K+   GI  N   Y  +L   C++     AI+L   M+  G +P+ +T  
Sbjct: 447 RIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYT 506

Query: 454 ELLVRLCKAGMAEDA 468
            L+  L   G+ ++A
Sbjct: 507 ILIEGLAYEGLVKEA 521



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 184/321 (57%), Gaps = 7/321 (2%)

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           + Q+D A+  +      + ++P+T  +N LI+  C RG  ++A  VL +M + +   P++
Sbjct: 133 TGQLDNARRLV----AAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLR-RGCVPDV 187

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +TY+ L++  CK   +++A++L +EM  K    PD +TYNV+++G C+ G+VD A + ++
Sbjct: 188 VTYTILLEATCKRSGYKQAVKLLDEMRDKG-CAPDIVTYNVVVNGICQEGRVDDAMEFLK 246

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            + + GC PN  +Y  ++ G C   + ++A+++  EM      P+ + +  LI+  CR G
Sbjct: 247 SLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRG 306

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            V+ A+E+L ++ + GC  + +++N IL   C++ K++ A+  +E +   G Y +  SY 
Sbjct: 307 LVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYN 366

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +L   C+ GE++ A+ELL  +  +G  P   + N ++  L KAG  E+A   L  +V  
Sbjct: 367 TLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTK 426

Query: 479 GFKPESDSWALLVELICR-GR 498
           G +P+  +++ +   +CR GR
Sbjct: 427 GLQPDIITYSTISSGLCREGR 447



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 178/315 (56%), Gaps = 5/315 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N ++  +C  G L++A  ++  M       P+  TY+TLI GLC  GR   A+
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME----PDTYTYNTLIRGLCGRGRTDNAL 172

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + ++M+ +  + PD +TY +L++  C+     +A K+++ M++ GC P++  Y  ++NG
Sbjct: 173 AVLDDMLRRGCV-PDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNG 231

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+EG++ +A E    + ++  +P+T+ Y  ++   C A R ++A +L+ EM  +G   +
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPN 291

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VTFN+++  LCR G +E A+ +L+++   G   N  SY  +L+  C++ ++++A+  + 
Sbjct: 292 VVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 351

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           LM+  G  P   + N LL  LC+ G  + A   L  L + G  P   S+  +++ + +  
Sbjct: 352 LMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 411

Query: 499 KLLFAFELLDELVIK 513
           K   A ELL+E+V K
Sbjct: 412 KTEEALELLNEMVTK 426



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 174/312 (55%), Gaps = 4/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+++   C+ G ++ A E LK +  S    PN ++Y+ ++ GLC   R+ +A +
Sbjct: 220 PDIVTYNVVVNGICQEGRVDDAMEFLKSLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEK 278

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  K +  P+ +T+N+LI   CR G V+ A +I++ +   GC PN  +Y  +++ F
Sbjct: 279 LMAEMSRKGRP-PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ K+  A    + M +    PD + Y TL+   CR G VD A+ELL ++K++GC   +
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 397

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++ GL + GK EEAL +L ++   G+  +  +Y  + +  C++G +E+AI+    
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGR 498
           +   G  P+    N +L+ LCK   A  +AI LF  +V  G  P   ++ +L+E +    
Sbjct: 458 VQDMGIRPNTVLYNAILLGLCKR-RATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEG 516

Query: 499 KLLFAFELLDEL 510
            +  A E++ EL
Sbjct: 517 LVKEAREMMAEL 528



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 174/312 (55%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + IL++  CKR   + A ++L EM+    + P+++TY+ +++G+C+ GR  +A+E
Sbjct: 185 PDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCA-PDIVTYNVVVNGICQEGRVDDAME 243

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             + + S     P+ ++YN+++ G C   + + A+K+M  M   G  PNV  +  L++  
Sbjct: 244 FLKSLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G ++ A E+ D++  +   P+++ Y  +++ FC+  ++D A+  ++ M   GC  DI
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI 362

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++N +L  LCR G+++ A+ +L +L   G      SY  V++   + G+ E+A+ELL  
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P   T + +   LC+ G  E+A  A   + +MG +P +  +  ++  +C+ R 
Sbjct: 423 MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRA 482

Query: 500 LLFAFELLDELV 511
              A +L   +V
Sbjct: 483 THSAIDLFTYMV 494



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 134/264 (50%), Gaps = 12/264 (4%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTY-NVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           L + G   EAI L E M   +   P A      LI   C  G+   A++++       C 
Sbjct: 66  LVRRGDLEEAIRLVESMAGLE---PSAAGPCAALIKKLCASGRTAEARRVLA-----SCE 117

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+V +Y  ++ G+C  G+L  A+ +   M    ++PDT  Y TLI   C  GR D AL +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M  RGC  D+VT+ I+L   C+    ++A+ +L+++   G   +  +Y +V+N  CQ
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           +G ++ A+E L+ +   G  P+  + N +L  LC A   EDA   +  +   G  P   +
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 487 WALLVELICRGRKLLFAFELLDEL 510
           + +L+  +CR   +  A E+LD++
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQI 318



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 131/259 (50%), Gaps = 39/259 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKK----------------------------- 230
           PN   FN+LI   C+RG +E A E+L ++ K                             
Sbjct: 290 PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 349

Query: 231 -----SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
                S   YP++++Y+TL+  LC+ G    A+EL  ++  K    P  ++YN +IDG  
Sbjct: 350 VELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG-CTPVLISYNTVIDGLT 408

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + GK + A +++  M   G  P++  Y+T+ +G C+EG+++EA + F ++++  ++P+T+
Sbjct: 409 KAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTV 468

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  ++   C+      A++L   M   GC  +  T+ I++ GL  EG ++EA  M+ +L
Sbjct: 469 LYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528

Query: 406 WYDGIY----LNKASYRIV 420
              G+     +NK + R++
Sbjct: 529 CSRGVVSKTLVNKGAIRLL 547


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 226/449 (50%), Gaps = 9/449 (2%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++++ + + + AL  F     Q  + H+   Y  +L+ L++ K  +    VLR M     
Sbjct: 106 AVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRI 165

Query: 127 KFHEGIFLNLMKHFSNCSLHE---RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
           +     F  +M  +S         RVL M  K       +P L   +T +++L+  N++D
Sbjct: 166 ERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGI----EPDLSICNTAIHVLVMGNRLD 221

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
            A  FL+   Q + ++PN   +N LIK +C    LE A E++ EM     S P+ I+Y T
Sbjct: 222 KAVRFLE-RMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCS-PDKISYYT 279

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           ++  LCK  R +E   L E+M+    +LPD +TYN  +    + G  D A + +   +  
Sbjct: 280 VMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER 339

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
               +   Y+ +++ FC+EG++ +AKE+ +EM +    PD + YT++IN  C+  +VD+A
Sbjct: 340 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 399

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            ++L++M + GCK + V++  +L GLC+ G   EA  M+     D    N  +Y ++++ 
Sbjct: 400 KKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHG 459

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             ++G+  +A +L+R M+ +GF P     N L+  LC+    ++A   +   +  G    
Sbjct: 460 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVN 519

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVI 512
             ++  ++   C+   L  A  LLD++ +
Sbjct: 520 VVNFTTVIHGFCQKDDLEAALSLLDDMYL 548



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 195/378 (51%), Gaps = 13/378 (3%)

Query: 143 CSLH--ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD----LAQNFLKYSNQHL 196
           C LH  E  +E+  ++ P     P   +  T +  L +  ++     L +  LK SN   
Sbjct: 250 CDLHRLEDAMELIAEM-PFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSN--- 305

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            L P+   +N  +    K G  + A E L+E ++ +    + + YS ++   C+ GR  +
Sbjct: 306 -LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV-DKVGYSAIVHSFCREGRMDK 363

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A E+  EM SK  I PD +TY  +I+G C+  KVD+AKK++  M  +GC PN  +YT L+
Sbjct: 364 AKEIVNEMFSKGCI-PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 422

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG CK G   EA+E+ +  +     P+ I Y+ L++ F R G+  EA +L++EM ++G  
Sbjct: 423 NGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFF 482

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
              V  N+++  LC+E K++EA   +E+   +G  +N  ++  V++  CQK +LE A+ L
Sbjct: 483 PTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSL 542

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M      P   T   ++  L K G  E+A      ++ +G  P   ++  ++   CR
Sbjct: 543 LDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR 602

Query: 497 GRKLLFAFELLDELVIKE 514
             ++    +LL++++ ++
Sbjct: 603 MGRVEDLLKLLEKMLSRQ 620



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 199/407 (48%), Gaps = 11/407 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH-E 147
           KG + +  +Y T++  L + K+ + V  ++ +M  ++    + +  N   H  +   H +
Sbjct: 268 KGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 327

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIF 205
             LE   +     R +      S  ++      ++D A+  +   +S   +   P+   +
Sbjct: 328 EALEFLREAEE-RRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI---PDVVTY 383

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             +I   C+   ++ A ++L++M K     PN ++Y+ L++GLCKNG   EA E+   M 
Sbjct: 384 TSVINGLCQERKVDQAKKMLRQMYKHGCK-PNTVSYTALLNGLCKNGNSLEAREMMN-MS 441

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +D  +P+A+TY+VL+ GF R GK   A  ++  M   G  P       L+   C+E K+
Sbjct: 442 EEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 501

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EAK   ++  N     + + +TT+I+ FC+   ++ AL LL +M       D+VT+  I
Sbjct: 502 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTI 561

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +  L ++G+IEEA  +  K+   G+     +YR V++  C+ G +E  ++LL  ML R  
Sbjct: 562 IDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ- 620

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
                  N+++ +LC  G  E A   L  ++    K ++++  +L+E
Sbjct: 621 -ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIE 666



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 42/352 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   ++ +N L +  +VD A+  L+   +H   KPNT  +  L+   CK G    A E
Sbjct: 378 PDVVTYTSVINGLCQERKVDQAKKMLRQMYKH-GCKPNTVSYTALLNGLCKNGNSLEARE 436

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++  M +     PN ITYS L+ G  + G+  EA +L  EM+ K    P  +  N+LI  
Sbjct: 437 MMN-MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG-FFPTPVEINLLIQS 494

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  KVD AK+ ME   NNGC  NV N+TT+++GFC++  L+ A  + D+M      PD
Sbjct: 495 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 554

Query: 344 TIGYTTLINC-----------------------------------FCRAGRVDEALELLK 368
            + YTT+I+                                    +CR GRV++ L+LL+
Sbjct: 555 VVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLE 614

Query: 369 EMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           +M  R  C+     +N ++  LC  G +E+A  +L K+      ++  +  +++     K
Sbjct: 615 KMLSRQECRT---AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSK 671

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           G    +  +   M  R  +P      ++  +L   G +E+A   +   VE G
Sbjct: 672 GIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 723



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 13/193 (6%)

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           SN+H    P+   +  +I    K+G +E A ++  +M +  +  P  +TY T+I   C+ 
Sbjct: 549 SNKH----PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL-IPTPVTYRTVIHQYCRM 603

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  + ++L E+M+S+ +       YN +I+  C  G +++A K++  +       +   
Sbjct: 604 GRVEDLLKLLEKMLSRQEC---RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANT 660

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
              L+  +  +G    +  V   M N  L PD      +       G+ +EA +L+    
Sbjct: 661 CHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFV 720

Query: 372 ERG-----CKADI 379
           ERG     C+ D+
Sbjct: 721 ERGRISPQCQLDL 733


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 220/436 (50%), Gaps = 18/436 (4%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +  T+  +L  L A  +  +A+D VLR+MT   C      + NL+K   + +  
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179

Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLR------ 197
           +  LE+ H +         P + + +T LN    E  Q  L    +  + + L       
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNG 239

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N ++  +C  G  + A   LK+M+   +  PN++TYS+L++ LCKNGR  EA
Sbjct: 240 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE-PNVVTYSSLMNYLCKNGRSTEA 298

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F+ M +K  + PD  TY  L+ G C+ G+V  ++K+ + M   G  P++  Y TL++
Sbjct: 299 RKIFDSM-TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 357

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  GK+ EA ++   M +  +KPD + Y TLIN +CR  R+D+AL L KEM   G   
Sbjct: 358 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 417

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I+T+NIIL GL    +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + 
Sbjct: 418 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 477

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE-LICR 496
           + +          T N ++  L K G  ++A          G  P+  +++L+ E LI +
Sbjct: 478 QNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQ 537

Query: 497 GRKLLFAFELLDELVI 512
           G     + E LD+L +
Sbjct: 538 G-----SLEELDDLFL 548



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 13/288 (4%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P + TY+ LI   C+ GR          +V K     DA+T+  L+ G C   +   A  
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKG-FRVDAITFTPLLKGLCADKRTSDAMD 148

Query: 296 I-MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYTTLI 351
           I +  M   GC P+VF+Y  L+ G C E + QEA E+   M   +     PD + Y T++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208

Query: 352 NCFCRAG--------RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           N F + G         +D+A+E+L  M + G   D +T+N IL G C  G+ +EA+G L+
Sbjct: 209 NGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK 268

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+  DG+  N  +Y  ++N+ C+ G   +A ++   M  RG  P  AT   LL   CK G
Sbjct: 269 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEG 328

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              ++      +V +G KP+  ++  L++  C   K+  A +LL  +V
Sbjct: 329 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 376



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 202/435 (46%), Gaps = 22/435 (5%)

Query: 72  EKEPQCALEIFNTVSEQKGFNH--NNATYATILDKL------------ARYKKFEAVDAV 117
           E   Q ALE+ + +++ +G     +  +Y T+L+              A  K  E ++ +
Sbjct: 176 ENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTM 235

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
           ++      C  +  I    +  + +    +  +    K+     E P++   S+ +N L 
Sbjct: 236 VKNGVMPDCMTYNSI----LHGYCSSGQPKEAIGTLKKMRSDGVE-PNVVTYSSLMNYLC 290

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           ++ +   A+       +   L+P+   +  L++ HCK G +  + ++   M +  +  P+
Sbjct: 291 KNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVK-PD 348

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           +ITY+TLIDG C  G+  EA +L   MVS   + PD +TY  LI+G+CR  ++D A  + 
Sbjct: 349 IITYNTLIDGCCLAGKMDEATKLLASMVSVG-VKPDIVTYGTLINGYCRVSRMDDALALF 407

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M ++G +PN+  Y  ++ G     +   AKE++  +     + +   Y  +++  C+ 
Sbjct: 408 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 467

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
              DEAL + + +     + +  TFNI++G L + G+++EA  +      +G+  +  +Y
Sbjct: 468 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 527

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            ++     ++G LE+  +L   M   G        N ++ +L + G    A   LF + E
Sbjct: 528 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 587

Query: 478 MGFKPESDSWALLVE 492
             F  E+ + + L+E
Sbjct: 588 KHFSLEASTASFLLE 602


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 208/398 (52%), Gaps = 9/398 (2%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++++ + + + AL+ F     Q  + H+   Y T+LD L++ +  +    +LR MT    
Sbjct: 169 AVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGI 228

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
           +     F  +M  +S   +    L +   +     E P L   +T + +L++ N+++ A 
Sbjct: 229 ERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVE-PDLSICNTAIYVLVKGNKLEKAL 287

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            FL+   +   ++P+   +N LIK +C    ++ A E++ EM       P+ ++Y T++ 
Sbjct: 288 RFLE-RMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCP-PDKVSYYTVMA 345

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
            LCK+ +  E   L E MV    ++PD +TYN LI    + G  D A   +   +  G +
Sbjct: 346 FLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFH 405

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +   Y+ +++ FCK   + +AK +  +M +    PD + YT +I+ FCR G++DEA ++
Sbjct: 406 IDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKM 465

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGML---EKLWYDGIYLNKASYRIVLNF 423
           L++M + GCK + VT+ ++L GLC  GK  EA  M+   E+ W+     N  +Y  V++ 
Sbjct: 466 LQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTP---NAITYSAVMHG 522

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             ++G+L +A +L R M+ +GFLP+    N L+  LC+
Sbjct: 523 LRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCR 560



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 188/374 (50%), Gaps = 5/374 (1%)

Query: 143 CSLH--ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
           C +H  +  LE+  ++ P     P   +  T +  L +  +V+  +  ++   Q+  L P
Sbjct: 313 CDVHRIDDALELIAEM-PFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIP 371

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +N LI    K G  + A   L+E ++    + + + YS ++D  CKN    +A  L
Sbjct: 372 DQVTYNTLIYALSKHGHADDALVFLREAEEKGF-HIDKVGYSAVVDSFCKNKNIDKAKSL 430

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             +M SK    PD +TY  +IDGFCR GK+D AKK+++ M  +GC PN   YT L+NG C
Sbjct: 431 VIDMYSKG-CNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLC 489

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
             GK  EA+E+ +  +     P+ I Y+ +++   R G++ EA +L +EM E+G   + V
Sbjct: 490 HNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPV 549

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
             N+++  LCR   +  A   LE+  + G  +N  ++  V+   CQ G+L+ A+ +L  M
Sbjct: 550 DINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDM 609

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                 P   T   L   L K    ++A+  +  ++  G  P   ++  ++   C+  ++
Sbjct: 610 YLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRV 669

Query: 501 LFAFELLDELVIKE 514
               +LL++++ ++
Sbjct: 670 DDMMKLLEKMIARQ 683



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 178/436 (40%), Gaps = 72/436 (16%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           +F   +E+KGF+ +   Y+ ++D   + K  +   +++  M  + C              
Sbjct: 394 VFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCN------------- 440

Query: 141 SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
                                  P +   +  ++      ++D A+  L+   +H   KP
Sbjct: 441 -----------------------PDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKH-GCKP 476

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT  + +L+   C  G    A E++  + +     PN ITYS ++ GL + G+  EA +L
Sbjct: 477 NTVTYTVLLNGLCHNGKSLEAREMIN-VSEEHWWTPNAITYSAVMHGLRREGKLSEACDL 535

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             EM+ K   LP+ +  N+LI   CR   V  AKK +E   + GC  NV N+T+++ GFC
Sbjct: 536 TREMIEKG-FLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFC 594

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           + G L  A  + ++M      PD I YTTL +   +  R+DEA EL+ +M  +G     V
Sbjct: 595 QIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPV 654

Query: 381 TF---------------------------------NIILGGLCREGKIEEALGMLEKLWY 407
           T+                                 N ++  LC  G  EEA  +L K+  
Sbjct: 655 TYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLR 714

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
               L+  +  I++      G    A ++   M  R  +P      ++  +L   GM  +
Sbjct: 715 TASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAE 774

Query: 468 AAIALFGLVEMGFKPE 483
           A   +   VE G + E
Sbjct: 775 ADDLMLRFVERGIQTE 790



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 170/389 (43%), Gaps = 54/389 (13%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
           HPI RE   L ++ +  N   E N     ++ L+  N  L       +  +L     +R 
Sbjct: 131 HPIVREVCRLISLRSNWNPKFEEN----LRHLLRSLNPRL-------VCAVLRSQDDERI 179

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDAL 275
            L+  +   ++ +       + I Y T++D L K    + A  +   M  +  +  P+A 
Sbjct: 180 ALDFFYWADRQWRYRH----DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAF 235

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           +Y  ++  + R G +  A +I+  M+  G  P++    T +    K  KL++A    + M
Sbjct: 236 SY--VMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERM 293

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           K   ++PD + Y  LI  +C   R+D+ALEL+ EM  +GC  D V++  ++  LC++ K+
Sbjct: 294 KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKV 353

Query: 396 EEALGMLEKLWYD------------------------------------GIYLNKASYRI 419
           EE   ++E +  +                                    G +++K  Y  
Sbjct: 354 EEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSA 413

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V++  C+   ++KA  L+  M  +G  P   T   ++   C+ G  ++A   L  + + G
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHG 473

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLD 508
            KP + ++ +L+  +C   K L A E+++
Sbjct: 474 CKPNTVTYTVLLNGLCHNGKSLEAREMIN 502



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 5/262 (1%)

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC--NPNVFNY 312
           R A++ F     + +   DA+ Y  ++D   +      A++I+  M   G   +P  F+Y
Sbjct: 178 RIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSY 237

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             +M  + + G L+ A  +   M+   ++PD     T I    +  ++++AL  L+ MK 
Sbjct: 238 --VMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKV 295

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + DIV++N ++ G C   +I++AL ++ ++ + G   +K SY  V+ F C+  ++E+
Sbjct: 296 AGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEE 355

Query: 433 AIELLRLMLCRG-FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
              L+  M+     +P   T N L+  L K G A+DA + L    E GF  +   ++ +V
Sbjct: 356 VKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVV 415

Query: 492 ELICRGRKLLFAFELLDELVIK 513
           +  C+ + +  A  L+ ++  K
Sbjct: 416 DSFCKNKNIDKAKSLVIDMYSK 437


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 225/437 (51%), Gaps = 10/437 (2%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H AA+  +K +K P  ALEIFN+V ++ GF H   TY  +++KL  + +FEA++ VL + 
Sbjct: 9   HVAAV--VKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAET 66

Query: 122 TYETCK-FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
                    EG+++  M+++      +  +++F ++     E PS+++ +  +N+L+E  
Sbjct: 67  RMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCE-PSVQSYNAIMNILVEYR 125

Query: 181 QVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
             D A   +++  ++ +   P+   F I +K  C+     +A  +L  M  SQ    + +
Sbjct: 126 YFDQAHKVYMRMRDKGIV--PDVYTFTIRMKSFCRTSRPHAARRLLNNM-PSQGCESSAV 182

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            Y T+I G  +     EA ELFEEM+    I PD + +N LI   CR G V  +++++  
Sbjct: 183 AYCTVIGGFYEENHRVEAHELFEEMLGLG-ICPDIMAFNKLIHTLCRKGHVQESERLLNK 241

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +   G +PN+F     + GFC+   L EA  + D +    L PD I Y TLI   C+  +
Sbjct: 242 VLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRG-LTPDVITYNTLICGLCKNFK 300

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           V EA   L++M   G + D  T+N I+ G C+ G ++ A  +L    + G   ++++Y  
Sbjct: 301 VVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCS 360

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++N  CQ G++++AI +    + +G  P+    N L+  L + G+   A   +  + E G
Sbjct: 361 LINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420

Query: 480 FKPESDSWALLVELICR 496
             P+  ++ L++  +C+
Sbjct: 421 CSPDIWTYNLVINGLCK 437



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 209/432 (48%), Gaps = 17/432 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  TY T++  L +  K    +  LR+M  E  +     + +++  +        
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCK------ 332

Query: 149 VLEMFHKIHPITREK------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
            L M      I R+       P      + +N L +   +D A N    + +   LKPN 
Sbjct: 333 -LGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK-GLKPNL 390

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
            + N L+K   ++G +  A +++ EM ++  S P++ TY+ +I+GLCK G   +A  L  
Sbjct: 391 VLCNTLVKGLSQQGLILQALKLMNEMSENGCS-PDIWTYNLVINGLCKIGCVSDADNLVI 449

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           + ++K   LPD  T+N LIDG+C+  K+D A +I++ M N+G +P+V  Y +++NG CK 
Sbjct: 450 DAIAKGH-LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKA 508

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK ++    F  M      P+ I Y  L   FC+A +V+EAL L++EM+ +G   D+V F
Sbjct: 509 GKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNK-ASYRIVLNFSCQKGELEKAIELLRLML 441
             ++ G C  G ++ A  + +++     + +  A+Y I++N    K  +  A +L   M 
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             GF P   T   ++   CK G        L   +E G  P   ++  ++  +C  R++ 
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688

Query: 502 FAFELLDELVIK 513
            A  ++  +V K
Sbjct: 689 EAVGIIHLMVHK 700



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 172/320 (53%), Gaps = 5/320 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  LI   C+ G ++ A  V  E  +  +  PNL+  +TL+ GL + G   +A++
Sbjct: 353 PDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLK-PNLVLCNTLVKGLSQQGLILQALK 411

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM S++   PD  TYN++I+G C+ G V  A  ++      G  P+VF + TL++G+
Sbjct: 412 LMNEM-SENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGY 470

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ KL  A E+ D M N  + PD I Y +++N  C+AG+ ++ +   K M E+GC  +I
Sbjct: 471 CKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNI 530

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+NI+    C+  K+EEAL ++E++   G+  +  ++  ++   C  G+L+ A +L + 
Sbjct: 531 ITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKR 590

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGR 498
           +  +    H   +  +++      +  + A  LF  + E GF P+S ++ ++++  C+  
Sbjct: 591 VDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTG 650

Query: 499 KLLFAFELLDELVIKESGTI 518
            +   +  L  LV  E G I
Sbjct: 651 NINSGYSFL--LVKIEKGLI 668



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 217/493 (44%), Gaps = 57/493 (11%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDK---------LARYKKF----- 111
           +    CE   Q    I N + E + F+  +  Y  + DK           R K F     
Sbjct: 102 MDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSR 161

Query: 112 -EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
             A   +L  M  + C+     +  ++  F   +      E+F ++  +    P + A +
Sbjct: 162 PHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGI-CPDIMAFN 220

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
             ++ L     V  ++  L   N+ L+  + PN    NI I+  C+R  L  A  +L  +
Sbjct: 221 KLIHTLCRKGHVQESERLL---NKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV 277

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK--------------------- 267
            +     P++ITY+TLI GLCKN +  EA     +MV++                     
Sbjct: 278 GRGLT--PDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGM 335

Query: 268 ----DQIL---------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
               DQIL         PD  TY  LI+G C+ G +DRA  +       G  PN+    T
Sbjct: 336 MQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNT 395

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+ G  ++G + +A ++ +EM      PD   Y  +IN  C+ G V +A  L+ +   +G
Sbjct: 396 LVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKG 455

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+ TFN ++ G C++ K++ A+ +++++W  G+  +  +Y  +LN  C+ G+ E  +
Sbjct: 456 HLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVM 515

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
              +LM+ +G +P+  T N L    CKA   E+A   +  +   G  P+  ++  L++  
Sbjct: 516 GTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGF 575

Query: 495 CRGRKLLFAFELL 507
           C    L  A++L 
Sbjct: 576 CDNGDLDGAYQLF 588



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 203/439 (46%), Gaps = 24/439 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            +G+  +  TY +I+D   +    +  D +LR   ++     E  + +L+         +
Sbjct: 313 NEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDID 372

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIF 205
           R + +F++      EK     +  C  L+   +Q  L    LK  N+       P+   +
Sbjct: 373 RAINVFNE----AMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTY 428

Query: 206 NILIKHHCKRGTLESAFE-VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           N++I   CK G +  A   V+  + K  +  P++ T++TLIDG CK  +   AIE+ + M
Sbjct: 429 NLVINGLCKIGCVSDADNLVIDAIAKGHL--PDVFTFNTLIDGYCKKLKLDNAIEIVDRM 486

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD +TYN +++G C+ GK +      + M   GC PN+  Y  L   FCK  K
Sbjct: 487 WNHG-VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCKADIVTFN 383
           ++EA  + +EM+N  L PD + + TL+  FC  G +D A +L K + E+      I T+N
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++     +  +  A  +  K+  +G   +  +YR++++  C+ G +      L + + +
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP------------ESDSWALLV 491
           G +P   T   +L  LC      +A   +  +V  G  P            E  +  ++V
Sbjct: 666 GLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTIFEADKKEVAAPKIVV 725

Query: 492 E-LICRGRKLLFAFELLDE 509
           E L+ +G    FA+E+L +
Sbjct: 726 ENLMKKGHITYFAYEILHD 744



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 157/301 (52%), Gaps = 3/301 (0%)

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           ++++ ++G ++ A +V + M       P++ +Y+ +++ L +   F +A +++  M  K 
Sbjct: 83  MRNYGRKGKIQEAVDVFERMDFFNCE-PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKG 141

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            I+PD  T+ + +  FCR  +   A++++  M + GC  +   Y T++ GF +E    EA
Sbjct: 142 -IVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEA 200

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            E+F+EM    + PD + +  LI+  CR G V E+  LL ++ +RG   ++ T NI + G
Sbjct: 201 HELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQG 260

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C+   + EA+ +L+ +   G+  +  +Y  ++   C+  ++ +A   LR M+  G+ P 
Sbjct: 261 FCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPD 319

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N ++   CK GM ++A   L      GF P+  ++  L+  +C+   +  A  + +
Sbjct: 320 GFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFN 379

Query: 509 E 509
           E
Sbjct: 380 E 380



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 143/295 (48%), Gaps = 9/295 (3%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI-LPDALTYNV 279
           A E+   +KK       L+TY  +I+ L  +G F    E  EE++++ ++ + + L   V
Sbjct: 23  ALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEF----EAMEEVLAETRMNIDNGLLEGV 78

Query: 280 LIDG---FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
            I     + R GK+  A  + E M    C P+V +Y  +MN   +     +A +V+  M+
Sbjct: 79  YIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMR 138

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +  + PD   +T  +  FCR  R   A  LL  M  +GC++  V +  ++GG   E    
Sbjct: 139 DKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRV 198

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  + E++   GI  +  ++  +++  C+KG ++++  LL  +L RG  P+  T N  +
Sbjct: 199 EAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI 258

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              C+  M  + AI L   V  G  P+  ++  L+  +C+  K++ A   L ++V
Sbjct: 259 QGFCQRAMLNE-AIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV 312


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 215/460 (46%), Gaps = 46/460 (10%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV 114
           ++S  +     +  +K E +   ALE F +++  K F H   TY  +++KLA  ++ + V
Sbjct: 36  EKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCV 95

Query: 115 DAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
             +L+QM  E     E +F++++  +      E+ L+ F+++                  
Sbjct: 96  QYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM------------------ 137

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
                              Q  R+KP   I+N ++         +    +   MKK  M 
Sbjct: 138 -------------------QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN+ TY+ L+  LCKN R   A +L  EM SK    PD ++Y  LI   C+ GKV  A+
Sbjct: 179 -PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG-CDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 295 KI-MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           ++ M F       P+V  Y  L+NG CKE   +EA ++ DEM N  + P+ I YTT+IN 
Sbjct: 237 ELAMSF------TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
              AG V+ +L +L +M  RGC  ++ TF  ++ G   +G   EAL   +++  +G+  N
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +++  C K  L  A+ +   M   G  P+  T + L+    KAG  + A+    
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            ++  G  P   ++  +V+++CR      A+ L++ + ++
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVE 450



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 200/398 (50%), Gaps = 17/398 (4%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E F  + E   KG + N  +Y TI++ L+     E   AVL +M    C  +   F +L+
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLI 323

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           K F         L+ + ++    RE   P++ A +  ++ L     +  A +        
Sbjct: 324 KGFFLKGGSHEALDFWDRM---IREGVVPNVVAYNALMHGLCSKRSLGDAVSVF----NQ 376

Query: 196 LRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           + +    PN   ++ LI  + K G L+ A EV   M  +   +PN++ Y+ ++D LC+N 
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI-THGCHPNVVAYTCMVDVLCRNS 435

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
            F +A  L E M   +   P+ +T+N  I G C  G+VD A K+ + M N+GC PN   Y
Sbjct: 436 MFNQAYCLIENM-QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTY 494

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L++   K+ +  EA  +  +M++  ++ + + Y T+I  +C AG + EALELL +M  
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVV 554

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           RG K D +T NI++   C++GK+  A+ ++++L     + +  +Y  +++  C    +E+
Sbjct: 555 RGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE 614

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           AI  LR ML  G  P+ AT N +LVR   + M    A+
Sbjct: 615 AIVYLRRMLSEGISPNVATWN-VLVRHLFSNMGHSGAV 651



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 200/410 (48%), Gaps = 13/410 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG + +  +Y T++  L +  K +    +    T  +   +  +   + K ++     +
Sbjct: 209 SKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-PSVPVYNALINGVCKEYTFEEAFQ 267

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
            + EM +K        P++ + +T +N L ++  V+L+   L  +    R   PN   F 
Sbjct: 268 LLDEMMNK-----GIDPNVISYTTIINALSDAGNVELSLAVL--AKMFARGCSPNLHTFT 320

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LIK    +G    A +    M +  +  PN++ Y+ L+ GLC      +A+ +F +M  
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGV-VPNVVAYNALMHGLCSKRSLGDAVSVFNQM-E 378

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            +   P+  TY+ LIDG+ + G +D A ++  +M  +GC+PNV  YT +++  C+     
Sbjct: 379 INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A  + + M+     P+T+ + T I   C +GRVD A+++  +M   GC  +  T+N +L
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             L ++ +  EA G+++ + + GI LN  +Y  ++   C  G L +A+ELL  M+ RG  
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELIC 495
           P   T N ++   CK G   + AI L   +  G + P+  ++  L+  IC
Sbjct: 559 PDAITVNIVIDAYCKQGKV-NIAIQLMDRLSAGKWHPDIIAYTSLISGIC 607


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 170/317 (53%), Gaps = 2/317 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R  PN   +N +I  +CK   ++ AF++L+ M    +  PNL+TY+ +I+GLC+ GR  E
Sbjct: 233 RCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLE-PNLLTYNMVINGLCRVGRIEE 291

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
              +  EM  +    PD +TYN L++G+C+ G   +A  +   M  NG  P+V  YT+L+
Sbjct: 292 TSGVLAEM-DRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLI 350

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           N  CK G L  A E FD+M    L+P+ + YT+LIN F + G +DEA  +  EM   G  
Sbjct: 351 NTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFP 410

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             IVT+N +L G C  G++EEA+G+L  +   G+  +  SY  ++   C+  EL++A ++
Sbjct: 411 PTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQM 470

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M+ +G  P   T + L+  LC+     +A      ++     P+  ++  L+   C+
Sbjct: 471 NAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCK 530

Query: 497 GRKLLFAFELLDELVIK 513
              L  A  L DE++ K
Sbjct: 531 EGDLNEALNLHDEMIKK 547



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 226/439 (51%), Gaps = 6/439 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKK-FEAVDAVLRQMTYETCKFHEGIFLNL 136
           AL I + +++  GF     +Y  ILD + R +K     + V R+M       +   +  L
Sbjct: 151 ALNIVD-LAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNIL 209

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           ++ F      E  L  F ++    R  P++   +T +    +  ++D A   L+ S    
Sbjct: 210 IRGFCAAGNLEMGLRFFEEMER-NRCLPNVVTYNTVIGAYCKLKRIDEAFKLLR-SMGLE 267

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            L+PN   +N++I   C+ G +E    VL EM +   + P+ +TY+TL++G CK G F +
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFA-PDGVTYNTLVNGYCKVGNFHQ 326

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L  EM+ ++ + PD +TY  LI+  C+ G ++RA +  + M   G  PN   YT+L+
Sbjct: 327 ALVLHSEML-RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLI 385

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NGF ++G + EA  ++DEM      P  + Y  L+N  C +GR++EA+ LL+ M+ +G  
Sbjct: 386 NGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLS 445

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+V+++ I+ G CR  +++ A  M  ++   G+  +  +Y  ++   C++  L +A +L
Sbjct: 446 PDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDL 505

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + ML +  LP   T   L+   CK G   +A      +++ GF P++ ++ +L+  + +
Sbjct: 506 FQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNK 565

Query: 497 GRKLLFAFELLDELVIKES 515
             +   A  LL +L   ES
Sbjct: 566 QARTREAKRLLLKLFYDES 584



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 214/442 (48%), Gaps = 62/442 (14%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TYET-----CK---FHE 130
           +G   N  TY  +++ L R  + E    VL +M          TY T     CK   FH+
Sbjct: 267 EGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQ 326

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
            + L+               EM     P     P +   ++ +N + ++  ++ A  F  
Sbjct: 327 ALVLHS--------------EMLRNGLP-----PDVVTYTSLINTMCKAGNLNRAMEF-- 365

Query: 191 YSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           +   H+R L+PN   +  LI    ++G ++ A+ +  EM +S    P ++TY+ L++G C
Sbjct: 366 FDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFP-PTIVTYNALLNGHC 424

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
            +GR  EAI L   M  K  + PD ++Y+ +I GFCR  ++DRA ++   M   G +P+ 
Sbjct: 425 VSGRMEEAIGLLRGMEGKG-LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDA 483

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y++L+ G C++ +L EA ++F EM N  L PD   YT+LIN +C+ G ++EAL L  E
Sbjct: 484 ITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDE 543

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M ++G   D VT+N+++ GL ++ +  EA  +L KL+YD    N  +Y  ++  SC   E
Sbjct: 544 MIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE-SCSDIE 602

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            +  + L++     GF              C  G+  +A      +++   KP    + +
Sbjct: 603 FKSVVALIK-----GF--------------CMKGLMNEADQVFESMIKRNQKPNEAVYNV 643

Query: 490 LVELICRGRKLLFAFELLDELV 511
           ++   CR   +  A +L  E+V
Sbjct: 644 IIHGHCRDGNVHKAHKLYKEMV 665



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 183/348 (52%), Gaps = 5/348 (1%)

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           +R+ E F  +  +  E  +P+L   +  +N L    +++     L   ++     P+   
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRK-GFAPDGVT 310

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+  +CK G    A  +  EM ++ +  P+++TY++LI+ +CK G    A+E F++M
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLP-PDVVTYTSLINTMCKAGNLNRAMEFFDQM 369

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  + P+ +TY  LI+GF + G +D A +I + M  +G  P +  Y  L+NG C  G+
Sbjct: 370 HVRG-LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++EA  +   M+   L PD + Y+T+I  FCR   +D A ++  EM E+G   D +T++ 
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC + ++ EA  + +++    +  ++ +Y  ++N  C++G+L +A+ L   M+ +G
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           FLP   T N L+  L K     +A   L  L      P   ++  L+E
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE 596



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 178/419 (42%), Gaps = 64/419 (15%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   +  TY ++++ + +            QM     + +   + +L+  FS     +
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMD 395

Query: 148 RVL----EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
                  EM     P     P++   +  LN    S +++ A   L+   +   L P+  
Sbjct: 396 EAYRIWDEMIRSGFP-----PTIVTYNALLNGHCVSGRMEEAIGLLR-GMEGKGLSPDVV 449

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            ++ +I   C+   L+ AF++  EM +  +S P+ ITYS+LI GLC+  R  EA +LF+E
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVS-PDAITYSSLIQGLCEQRRLNEACDLFQE 508

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG----- 318
           M++K  +LPD  TY  LI+G+C+ G ++ A  + + M   G  P+   Y  L+NG     
Sbjct: 509 MLNK-SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQA 567

Query: 319 ---------------------------------------------FCKEGKLQEAKEVFD 333
                                                        FC +G + EA +VF+
Sbjct: 568 RTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFE 627

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M     KP+   Y  +I+  CR G V +A +L KEM + G     VT   ++  L  EG
Sbjct: 628 SMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687

Query: 394 KIEEALGMLEKLWYDGIYLNKASY-RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            ++E L ++ +       L+ A   + ++  + ++G ++    LL  M   GFLP  A 
Sbjct: 688 -MDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPSGAA 745


>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
           salt-inducible-like protein (GB:AL021637) [Arabidopsis
           thaliana]
          Length = 991

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 200/366 (54%), Gaps = 5/366 (1%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           LI  + +P  A EIF+  S+Q  F H+ +++  ++ KL R + F  +D VL +       
Sbjct: 57  LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
               IF  L+K ++   L E+VL  F+K+       P  K ++  L++L+ S++  L + 
Sbjct: 117 LTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNF-TPQPKHLNRILDVLV-SHRGYLQKA 174

Query: 188 FLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
           F  + +  L  + PNT  +N+L++  C    L  A+++  +M +  +  P++ +Y  LI 
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV-VPDVDSYKILIQ 233

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G C+ G+   A+EL ++M++K   +PD L+Y  L++  CR  ++  A K++  MK  GCN
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKG-FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ +Y T++ GFC+E +  +A++V D+M +    P+++ Y TLI   C  G  DE  + 
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L+EM  +G        N ++ G C  GK+EEA  ++E +  +G  L+  ++ +V+   C 
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412

Query: 427 KGELEK 432
           + E EK
Sbjct: 413 EDESEK 418



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 35/243 (14%)

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G + +A ++ +  + +G  PN  +Y  LM  FC    L  A ++F +M    + PD   Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228

Query: 348 TTLINCFCRAGRVDEALELLKE-----------------------------------MKE 372
             LI  FCR G+V+ A+ELL +                                   MK 
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +GC  D+V +N ++ G CRE +  +A  +L+ +  +G   N  SYR ++   C +G  ++
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             + L  M+ +GF PH++ SN L+   C  G  E+A   +  +++ G    SD+W +++ 
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408

Query: 493 LIC 495
           LIC
Sbjct: 409 LIC 411



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 13/228 (5%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLES 220
           P   + +T LN L    Q+  A   L      ++LK   P+   +N +I   C+      
Sbjct: 258 PDRLSYTTLLNSLCRKTQLREAYKLL----CRMKLKGCNPDLVHYNTMILGFCREDRAMD 313

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A +VL +M  +  S PN ++Y TLI GLC  G F E  +  EEM+SK    P     N L
Sbjct: 314 ARKVLDDMLSNGCS-PNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG-FSPHFSVSNCL 371

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           + GFC  GKV+ A  ++E +  NG   +   +  ++   C E + ++ K   ++     +
Sbjct: 372 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDA----V 427

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           K +  G T +++     G      + + E+++    A+ V  + +  G
Sbjct: 428 KEEITGDTRIVDVGIGLGSYLSKNKKMPEIEQDDAAAETVDSSTVKFG 475


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 231/463 (49%), Gaps = 37/463 (7%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           +   IS+   I  +  ++    A E+F  +  Q G   +  +Y T++       K+E   
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQ-GIMPDVISYTTLIHGFCLSGKWEKAK 357

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSL-------HERVLEMFHKIHPITREKPSLKA 168
                     C F+E + + +    +  S+         +V+E  +K+  +  ++  +  
Sbjct: 358 ----------CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA-NKLLEVVIQRGCIPD 406

Query: 169 ISTCLNL---LIESNQVDLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           + TC  L   L   +++  A Q FLK   Q L   PN      L+K  C+ G ++ A E+
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKM--QKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 225 LKEMKKSQMSY-----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            K M      Y     PN I+YS +IDGLCK GR  EA ELF+EM +   ++PD ++Y  
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG-VIPDVISYTS 523

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI GFCR GK   AK +   M + G  P+V  ++ L++  CKEGK+ EA E+ + M    
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 583

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             P+T+ YTTL+   C   R+ EA +L  +M++ GC  D+VT+  ++ GLC+ G I+ AL
Sbjct: 584 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 643

Query: 400 GMLEKLWYD-GIY-----LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            + +K+  D G Y      +  SY I+++  C+ G  ++A EL + M   G +P+  +  
Sbjct: 644 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 703

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            L+   C++G  EDA      +V+ G +  + ++++++   C+
Sbjct: 704 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCK 746



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 226/427 (52%), Gaps = 16/427 (3%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           +Y+ I+D L + ++ +    + ++M  +        +  L+  F      E+   +F+++
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 363

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
             +  + P +   S  +++L +  +V  A   L+   Q   + P+      L+K  C + 
Sbjct: 364 LDVGIQ-PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI-PDVVTCTTLVKGLCMKH 421

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL----- 271
            +  A ++  +M+K     PN++T +TL+ GLC++G  + A+EL + M+S          
Sbjct: 422 RISKATQLFLKMQKLG-CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 480

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+A++Y+++IDG C+ G+ D A+++ + MK  G  P+V +YT+L++GFC+ GK ++AK +
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F+EM +  ++PD   ++ LI+  C+ G+V EA ELL+ M +RGC  + VT+  ++ GLC 
Sbjct: 541 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 600

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC------RGF 445
             +I EA  +  K+   G   +  +Y  ++   CQ G ++ A+EL + ML         F
Sbjct: 601 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 660

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAF 504
            P   + + ++  LCK G  ED A  LF  +  +G  P   S+  L+   CR  KL  A 
Sbjct: 661 KPDVISYSIIIDGLCKHG-REDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 505 ELLDELV 511
            L +E+V
Sbjct: 720 HLFNEMV 726



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 207/399 (51%), Gaps = 32/399 (8%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  T + ++D L +  K    + +L  +    C          +     C+   + 
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC----------IPDVVTCTTLVKG 416

Query: 150 LEMFHKIHPITR-----EK----PSLKAISTCLNLLIESNQVDLA----QNFLKYSNQH- 195
           L M H+I   T+     +K    P++   +T +  L +S  + +A    +N L  ++ + 
Sbjct: 417 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG 476

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +  KPN   ++I+I   CK G  + A E+ KEMK   +  P++I+Y++LI G C++G+++
Sbjct: 477 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV-IPDVISYTSLIHGFCRSGKWK 535

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  LF EMV    + PD  T++VLID  C+ GKV  A +++E M   GC PN   YTTL
Sbjct: 536 DAKYLFNEMVDIG-VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 594

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM----K 371
           + G C   ++ EA ++F +M+     PD + Y TL+   C+ G +  ALEL K+M     
Sbjct: 595 VKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTG 654

Query: 372 ERGC--KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           + G   K D+++++II+ GLC+ G+ +EA  + +++   G+  N  SY  +++  C+ G+
Sbjct: 655 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGK 714

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           LE A  L   M+ +G   +  T + ++   CK G  + A
Sbjct: 715 LEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 217/428 (50%), Gaps = 14/428 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  T   ++D   +  K    + +L  M    C      +  L+K           
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA----QNFLKYSNQH-LRLKPNTCI 204
            ++F  +  +   +P   A  T +  L ++ ++++A    Q  L  ++Q+ ++ KP    
Sbjct: 65  TQLFMSMKKLGC-RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS 123

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++I+I   CK    + A E+ KEMK   M  P++I+Y++LI G C++G++ +A  LF EM
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGM-MPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +    I  D  T ++LID  C+ GKV  A +++E M   GC  ++  Y+TL+ G C + +
Sbjct: 183 LDVG-IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERG-----CKAD 378
           + EA  +F  M+    +PD I Y TL+   C+ G ++ AL+L +EM  + G     CK  
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +++++II+ GLC++ + +EA  + +++   GI  +  SY  +++  C  G+ EKA  L  
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            ML  G  P   TS+ L+  LCK G   +A   L  +++ G  P+  +   LV+ +C   
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421

Query: 499 KLLFAFEL 506
           ++  A +L
Sbjct: 422 RISKATQL 429



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 230/467 (49%), Gaps = 59/467 (12%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            +Y+ I+D L + ++ +    + ++M  +        + +L+  F      E+   +F++
Sbjct: 122 VSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNE 181

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI-----LIK 210
           +  +   +  +   S  +++L +  +V  A   L+   Q        CI +I     LIK
Sbjct: 182 MLDVGI-RSDVTTSSMLIDILCKEGKVIEANELLEVMIQR------GCILDIVTYSTLIK 234

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-- 268
             C +  +  A  +   M+K     P+ I Y TL+ GLC+ G    A++L +EM++    
Sbjct: 235 GLCMKHRISEATRLFMSMQKLG-CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGR 293

Query: 269 ---QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
              +  P  ++Y+++IDG C+  + D A+++ + MK  G  P+V +YTTL++GFC  GK 
Sbjct: 294 YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKW 353

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           ++AK +F+EM +  ++PD    + LI+  C+ G+V EA +LL+ + +RGC  D+VT   +
Sbjct: 354 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413

Query: 386 LGGLCREGKIEEALGMLEKLWYDG----------------------IYL----------- 412
           + GLC + +I +A  +  K+   G                      I L           
Sbjct: 414 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473

Query: 413 --------NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
                   N  SY I+++  C+ G  ++A EL + M   G +P   +   L+   C++G 
Sbjct: 474 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 533

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            +DA      +V++G +P+  ++++L++++C+  K++ A ELL+ ++
Sbjct: 534 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMI 580



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 177/329 (53%), Gaps = 16/329 (4%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H+ ++P+     +LI   CK G +  A E+L+ M + +    +++TYSTLI GLC   R 
Sbjct: 3   HVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQ-RGCILDIVTYSTLIKGLCMKHRI 61

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG------CNPN 308
            EA +LF  M  K    PDA+ Y  L+ G C+ GK++ A  + + M N+       C P 
Sbjct: 62  SEATQLFMSM-KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           + +Y+ +++G CK+ +  EA+E+F EMK   + PD I YT+LI+ FCR+G+ ++A  L  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM + G ++D+ T ++++  LC+EGK+ EA  +LE +   G  L+  +Y  ++   C K 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF-------GLVEMGFK 481
            + +A  L   M   G  P       L+  LC+ G   + A+ L        G   +  K
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNI-NTALQLHQEMLNDTGRYGIKCK 299

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
           P   S++++++ +C+ R+   A EL  E+
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEM 328



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 184/357 (51%), Gaps = 48/357 (13%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ LIK  C +  +  A ++   MKK     P+ I Y TL+ GLC+ G+   A+ L +EM
Sbjct: 48  YSTLIKGLCMKHRISEATQLFMSMKKLG-CRPDAIAYGTLMKGLCQTGKINIALHLHQEM 106

Query: 265 VSKD-----QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           ++       +  P  ++Y+++IDG C+  + D A+++ + MK  G  P+V +YT+L++GF
Sbjct: 107 LNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGF 166

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ GK ++AK +F+EM +  ++ D    + LI+  C+ G+V EA ELL+ M +RGC  DI
Sbjct: 167 CRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 226

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT++ ++ GLC + +I EA  +   +   G   +  +Y  ++   CQ G +  A++L + 
Sbjct: 227 VTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE 286

Query: 440 ML-----------------------------------------CRGFLPHYATSNELLVR 458
           ML                                          +G +P   +   L+  
Sbjct: 287 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
            C +G  E A      ++++G +P+  + ++L++++C+  K++ A +LL E+VI+  
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL-EVVIQRG 402



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 133/210 (63%), Gaps = 8/210 (3%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + ++P+   F++LI   CK G +  A E+L+ M + +   PN +TY+TL+ GLC N R  
Sbjct: 547 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ-RGCIPNTVTYTTLVKGLCMNDRIS 605

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA----KKIMEFMKNNGCN--PNV 309
           EA +LF +M  K   LPD +TY  L+ G C+ G +  A    KK++      G N  P+V
Sbjct: 606 EATQLFMKM-QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
            +Y+ +++G CK G+  EA+E+F EMK   + P+ I YT+LI+ FCR+G++++A  L  E
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEAL 399
           M ++G + + VT+++++ G C+EG+I++AL
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 153/276 (55%), Gaps = 8/276 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  +Y+ I+D L +  + +    + ++M           + +L+  F      +    +F
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 541

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +++  I  + P +   S  +++L +  +V  A   L+   Q   + PNT  +  L+K  C
Sbjct: 542 NEMVDIGVQ-PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI-PNTVTYTTLVKGLC 599

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD----- 268
               +  A ++  +M+K     P+++TY TL+ GLC+ G  + A+EL ++M+S       
Sbjct: 600 MNDRISEATQLFMKMQKLG-CLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 658

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              PD ++Y+++IDG C+ G+ D A+++ + MK  G  PNV +YT+L++GFC+ GKL++A
Sbjct: 659 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 718

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           K +F+EM +  ++ + + Y+ +I+ FC+ G++D+AL
Sbjct: 719 KHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 118/218 (54%), Gaps = 6/218 (2%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M + G  P+V     L++ FCKEGK+ EA E+ + M       D + Y+TLI   C   R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GIYLNK- 414
           + EA +L   MK+ GC+ D + +  ++ GLC+ GKI  AL + +++  D    GI     
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 415 -ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             SY I+++  C+    ++A EL + M  +G +P   +   L+   C++G  E A     
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            ++++G + +  + ++L++++C+  K++ A ELL+ ++
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMI 218


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 229/475 (48%), Gaps = 30/475 (6%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +T ++A  R   +                 A E+ +++S  KG      TY  I
Sbjct: 130 PDVVTYNTLINAYCRQGLLEE---------------AFELMDSMS-GKGLKPCVFTYNAI 173

Query: 102 LDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           ++ L +  K+     VL +M     + +T  ++  I L       N    ER+ +     
Sbjct: 174 INGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN--ILLVECCRNDNMMDAERIFDEM--- 228

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
            P     P L + S  + LL ++  +D A  + +   ++  L P+  I+ ILI   C+ G
Sbjct: 229 -PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR-DMKNAGLAPDNVIYTILIGGFCRNG 286

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            +  A +V  EM + Q    +++TY+T+++GLCK     EA ELF EM  +  + PD  T
Sbjct: 287 VMSEALKVRDEMLE-QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG-VFPDFYT 344

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           +  LI+G+ + G +++A  + E M      P+V  Y TL++GFCK  ++++  E++++M 
Sbjct: 345 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 404

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +  + P+ I Y  LIN +C  G V EA  L  EM E+G +A I+T N I+ G CR G   
Sbjct: 405 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 464

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +A   L  +   GI  +  +Y  ++N   ++  +++A  L+  M   G LP   T N +L
Sbjct: 465 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 524

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
               + G  ++A + +  ++E G  P+  ++  L+        L  AF + DE++
Sbjct: 525 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 579



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 188/349 (53%), Gaps = 3/349 (0%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           ++  ++  +N L ++ +++  ++FL    +   + P+   +N LI  +C++G LE AFE+
Sbjct: 96  NVYTLNIMINALCKNQKIENTKSFLS-DMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL 154

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
           +  M    +  P + TY+ +I+GLCK G++  A  + +EM+ K  + PD  TYN+L+   
Sbjct: 155 MDSMSGKGLK-PCVFTYNAIINGLCKTGKYLRAKGVLDEML-KIGMSPDTATYNILLVEC 212

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           CR   +  A++I + M + G  P++ +++ L+    K G L +A + F +MKN  L PD 
Sbjct: 213 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 272

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + YT LI  FCR G + EAL++  EM E+GC  D+VT+N IL GLC+E  + EA  +  +
Sbjct: 273 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 332

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G++ +  ++  ++N   + G + KA+ L  +M+ R   P   T N L+   CK   
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            E        ++     P   S+ +L+   C    +  AF L DE+V K
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 441



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 15/438 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN-L 136
           A EI+  V  + G   N  T   +++ L + +K E   + L  M  E   F + +  N L
Sbjct: 81  AWEIYQEVV-RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTL 138

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           +  +    L E   E+   +      KP +   +  +N L ++ +   A+  L      +
Sbjct: 139 INAYCRQGLLEEAFELMDSMSG-KGLKPCVFTYNAIINGLCKTGKYLRAKGVLD-EMLKI 196

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+T  +NIL+   C+   +  A  +  EM  SQ   P+L+++S LI  L KNG   +
Sbjct: 197 GMSPDTATYNILLVECCRNDNMMDAERIFDEMP-SQGVVPDLVSFSALIGLLSKNGCLDQ 255

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A++ F +M     + PD + Y +LI GFCR G +  A K+ + M   GC  +V  Y T++
Sbjct: 256 ALKYFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 314

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG CKE  L EA E+F EM    + PD   +TTLIN + + G +++A+ L + M +R  K
Sbjct: 315 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 374

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GIYLNKASYRIVLNFSCQKGELEK 432
            D+VT+N ++ G C+  ++E+    + +LW D     IY N  SY I++N  C  G + +
Sbjct: 375 PDVVTYNTLIDGFCKGSEMEK----VNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 430

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  L   M+ +GF     T N ++   C+AG A  A   L  ++  G  P+  ++  L+ 
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490

Query: 493 LICRGRKLLFAFELLDEL 510
              +   +  AF L++++
Sbjct: 491 GFIKEENMDRAFALVNKM 508



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 150/302 (49%), Gaps = 7/302 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ + + EQ G   +  TY TIL+ L + K     D +  +MT          F  L+
Sbjct: 291 ALKVRDEMLEQ-GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 349

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
             +S      + + +F  +  I R  KP +   +T ++   + ++++   N L       
Sbjct: 350 NGYSKDGNMNKAVTLFEMM--IQRNLKPDVVTYNTLIDGFCKGSEME-KVNELWNDMISR 406

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ PN   + ILI  +C  G +  AF +  EM +       +IT +T++ G C+ G   +
Sbjct: 407 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE-ATIITCNTIVKGYCRAGNAVK 465

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A E    M+ K  I+PD +TYN LI+GF +   +DRA  ++  M+N+G  P+V  Y  ++
Sbjct: 466 ADEFLSNMLLKG-IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 524

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NGF ++G++QEA+ +  +M    + PD   YT+LIN       + EA  +  EM +RG  
Sbjct: 525 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 584

Query: 377 AD 378
            D
Sbjct: 585 PD 586



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 1/275 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N + +  L+    +  + RE  E F  + SK  +       N L+ G  + G VD A +I
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKG-LCVSINACNSLLGGLVKVGWVDLAWEI 84

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            + +  +G   NV+    ++N  CK  K++  K    +M+   + PD + Y TLIN +CR
Sbjct: 85  YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G ++EA EL+  M  +G K  + T+N I+ GLC+ GK   A G+L+++   G+  + A+
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y I+L   C+   +  A  +   M  +G +P   + + L+  L K G  + A      + 
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 264

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             G  P++  + +L+   CR   +  A ++ DE++
Sbjct: 265 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 299



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 2/222 (0%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           +V+  + ++    N G NP VF+   L+  + +  KL+E  E F  +K+  L        
Sbjct: 9   RVEIVESLVLTYGNCGSNPLVFDL--LVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           +L+    + G VD A E+ +E+   G + ++ T NI++  LC+  KIE     L  +   
Sbjct: 67  SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G++ +  +Y  ++N  C++G LE+A EL+  M  +G  P   T N ++  LCK G    A
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              L  ++++G  P++ ++ +L+   CR   ++ A  + DE+
Sbjct: 187 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 228


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 201/433 (46%), Gaps = 39/433 (9%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           +  F     Q  +NH   +Y  +L+ LA+  + + V      M    C  +   +  L++
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
                   E    +F  +           A   C                          
Sbjct: 61  SLCQAQRFEEARSVFRGM-----------AAQGC-------------------------- 83

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            PN   ++ILI   C+   ++ A E+L EM       PN++TY +L+ GLCK G+ +EA+
Sbjct: 84  SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ-PNVVTYGSLLSGLCKMGKLKEAV 142

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF  MV +    PD + YNVLIDGF + G +  A ++ E M   GC P VF Y +L++G
Sbjct: 143 DLFSRMVYRG-CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           F ++G+    + +F +M      P+   +  L++ FC+ G + EA  L  EM+  GC  D
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +V++N ++ G+C +GK  EA  +L ++   G+  +  SY I+++   + G L+ AI+L  
Sbjct: 262 VVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY 321

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P   + + ++  LC+AG    A +    ++  G  P++     LV  +CRG 
Sbjct: 322 EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGE 381

Query: 499 KLLFAFELLDELV 511
           +L  + EL   +V
Sbjct: 382 RLTESCELFQAMV 394



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 160/316 (50%), Gaps = 2/316 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PNT  +  L++  C+    E A  V + M  +Q   PN+ +YS LI GLC+  +  EA E
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMA-AQGCSPNVFSYSILIAGLCRGQKVDEAAE 108

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM+      P+ +TY  L+ G C+ GK+  A  +   M   GC P+   Y  L++GF
Sbjct: 109 LLNEMIDGGH-QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF 167

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K+G + EA  +F+EM      P    Y +L++ F R G       L K+M  +GC  +I
Sbjct: 168 SKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNI 227

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TFN +L G C+ G + EA  +  ++   G   +  SY  ++   C KG+  +A  LLR 
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLRE 287

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G  P   + N L+    K+G  + A    + + + G +P++ S++ +++ +CR  K
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347

Query: 500 LLFAFELLDELVIKES 515
           +  AF +  +++   S
Sbjct: 348 VGAAFVVFKDMIANGS 363



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 168/350 (48%), Gaps = 17/350 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNL 136
           A E+ N + +  G   N  TY ++L  L +  K  EAVD +  +M Y  C     ++  L
Sbjct: 106 AAELLNEMID-GGHQPNVVTYGSLLSGLCKMGKLKEAVD-LFSRMVYRGCPPDGVVYNVL 163

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           +  FS          +F ++     EK   P++   ++ L+      +    Q+  K   
Sbjct: 164 IDGFSKKGDMGEAYRLFEEM----LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK--- 216

Query: 194 QHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             LR    PN   FN L+   CK G +  A  +  EM+ S    P++++Y+TL+ G+C  
Sbjct: 217 DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR-SLGCPPDVVSYNTLMRGMCSK 275

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+  EA  L  EM+ +  + PD ++YN+LIDG+ + G +D A K+   +  +G  P+ F+
Sbjct: 276 GKPHEAQRLLREMI-RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS 334

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+T+++  C+ GK+  A  VF +M      PD      L+   CR  R+ E+ EL + M 
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           +  C   I  +N+++  LC+  + ++   +  +L   G   +    +++L
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 80/170 (47%)

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ Y  L+    ++GR D       +M   GC  +  T+  +L  LC+  + EEA  +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G   N  SY I++   C+  ++++A ELL  M+  G  P+  T   LL  LCK G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++A      +V  G  P+   + +L++   +   +  A+ L +E++ K
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186


>gi|356514549|ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Glycine max]
          Length = 465

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 222/465 (47%), Gaps = 13/465 (2%)

Query: 57  SRFISHGAAISLIKCEKEPQCALEIF-----NTVSEQKGFNHNNATYATILDKLARYKKF 111
           S+ IS     SL++  K+P  AL++F     N     +   H+  +Y  ++ KLAR K F
Sbjct: 4   SKPISPFRLTSLLRSTKDPSLALQLFLNPNPNPNPNPRPLRHSLRSYDLLITKLARAKMF 63

Query: 112 EAVDAVLRQM-TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
             ++ +L Q+ T       E +   ++  ++   L  R L  F  I P  R  P+LK+ +
Sbjct: 64  PQMEQILHQLQTLTQFPVPEPLLCRVIISYARARLPSRALRTFLSI-PSFRCTPTLKSFN 122

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH-HCKRGTLESAFEVLKEMK 229
           + L+ L+           L          P+ C +NILI+        L  A ++  EM 
Sbjct: 123 SLLHALLLCRDFPSLPRLLPRLRHFSASGPDACTYNILIRACSLNNNDLAHARKLFDEML 182

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRF--REAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
              +  P  +T+ TLI+ LCK+     REA  + E+M    ++ P+   Y  LI   C  
Sbjct: 183 TLGVR-PTQVTFGTLINMLCKDPHLNLREAFSVKEDMERVFKLKPNVFVYTNLIKAVCEV 241

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G  D A ++ + M  N    +V  Y TL +   K GK      + +EMK+  +KPD +  
Sbjct: 242 GDFDCAFRLKDEMVRNNLRLDVVVYNTLTSAVFKAGKKGLGYRILEEMKSGGVKPDAVTC 301

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             LI  FCR G + EA  +L +  E G K D+  +N+++G LC+EGK  EA  +   +  
Sbjct: 302 NVLIGEFCREGNLVEAYRVLDDGVE-GVKPDVFGYNVVIGWLCKEGKWREADDLFRDMPR 360

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
                +  +YR V +  CQ  + E+A  +L  M+ +G++P  ++ NE + RLC+ G  E 
Sbjct: 361 RQCVPDVVTYRTVFDGLCQWMQFEEAGLVLEEMVFKGYVPCSSSLNEFVGRLCQEGDFEL 420

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
               L GL   GF    + W  +V L+C+  KL  AFELLD LV+
Sbjct: 421 LGKVLSGL-GGGFFCNENVWKTVVSLVCKSEKLSGAFELLDALVL 464


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 211/398 (53%), Gaps = 9/398 (2%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++++ + + + AL  F     Q  ++H+   Y T+LD L++ K  +    VLR MT    
Sbjct: 168 AVLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGI 227

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
           +     F  +M  +S        L +   +     E P+L   +T + +L++  +++ A 
Sbjct: 228 ELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVE-PNLSICNTTIYVLVKGCKLEKAL 286

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            FL+   Q   +KP+   +N LIK +C    +E A E++  +  S+   P+ ++Y T++ 
Sbjct: 287 RFLE-RMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGL-PSKGCPPDKVSYYTVMG 344

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
            LCK  +  +   L E+MV    ++PD +TYN LI    + G  D A   ++  ++ G +
Sbjct: 345 FLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFH 404

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +   Y+ +++ FC++G++ EAK +  +M +    PD + YT +++ FCR GR+DEA ++
Sbjct: 405 IDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKM 464

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGML---EKLWYDGIYLNKASYRIVLNF 423
           L++M + GCK + V++  +L GLC  GK  EA  M+   E+ W+     N  +Y +V++ 
Sbjct: 465 LQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTP---NAITYGVVMHG 521

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             ++G+L +A +L R M+ +GF P     N L+  LC+
Sbjct: 522 FRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQ 559



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 206/428 (48%), Gaps = 3/428 (0%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           T+ ++ G   N +   T +  L +  K E     L +M     K     + +L+K + + 
Sbjct: 255 TLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDL 314

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  E  LE+   + P     P   +  T +  L +  +++  +  ++   Q   L P+  
Sbjct: 315 NRIEDALELIAGL-PSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQV 373

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N LI    K G  + A   LKE +     + + + YS ++   C+ GR  EA  L  +
Sbjct: 374 TYNTLIHMLSKHGHADDALAFLKEAEDKGF-HIDKVGYSAIVHSFCQKGRMDEAKSLVID 432

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M S+    PD +TY  ++DGFCR G++D AKK+++ M  +GC PN  +YT L+NG C  G
Sbjct: 433 MYSR-SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSG 491

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K  EA+E+ +  +     P+ I Y  +++ F R G++ EA +L +EM E+G     V  N
Sbjct: 492 KSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEIN 551

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++  LC+  K+ EA   LE+    G  +N  ++  V++  CQ G++E A+ +L  M   
Sbjct: 552 LLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLS 611

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T   L   L K G  ++AA  +  ++  G  P   ++  ++   C+  ++   
Sbjct: 612 NKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDM 671

Query: 504 FELLDELV 511
             LLD +V
Sbjct: 672 LNLLDRMV 679



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 202/418 (48%), Gaps = 12/418 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+   +   KG   +  +Y T++  L + KK E V  ++ +M  ++    + +  N +
Sbjct: 320 ALELIAGLP-SKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTL 378

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL--KYSNQH 195
            H  +   H      F K              S  ++   +  ++D A++ +   YS   
Sbjct: 379 IHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRS- 437

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+   +  ++   C+ G ++ A ++L++M K     PN ++Y+ L++GLC +G+  
Sbjct: 438 --CNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCK-PNTVSYTALLNGLCHSGKSL 494

Query: 256 EAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           EA E+    VS++    P+A+TY V++ GF R GK+  A  +   M   G  P       
Sbjct: 495 EAREMIN--VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINL 552

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+   C+  K+ EAK+  +E  N     + + +TT+I+ FC+ G ++ AL +L++M    
Sbjct: 553 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSN 612

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D VT+  +   L ++G+++EA  ++ K+   G+     ++R V++  CQ G ++  +
Sbjct: 613 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDML 672

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
            LL  M+ R   P     N ++ +LC  G  E+A   L  ++    K ++++  +L+E
Sbjct: 673 NLLDRMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLME 728



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 152/351 (43%), Gaps = 36/351 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +  ++      ++D A+  L+   +H   KPNT  +  L+   C  G    A E
Sbjct: 440 PDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKH-GCKPNTVSYTALLNGLCHSGKSLEARE 498

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++  + +     PN ITY  ++ G  + G+  EA +L  EMV K    P  +  N+LI  
Sbjct: 499 MIN-VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKG-FFPTPVEINLLIQS 556

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  KV  AKK +E   N GC  NV N+TT+++GFC+ G ++ A  V ++M      PD
Sbjct: 557 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPD 616

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF--------------------- 382
            + YT L +   + GR+DEA EL+ +M  +G     VTF                     
Sbjct: 617 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLD 676

Query: 383 ------------NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
                       N ++  LC  G +EEA  +L K+      L+  +  +++    +KG  
Sbjct: 677 RMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVA 736

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
             A ++   M  R   P      ++  +L   G   +A   +   VE G +
Sbjct: 737 LSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQ 787



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 174/389 (44%), Gaps = 54/389 (13%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
           HP+ RE   L  +S+  N   E     L ++          LKP + +  +L     +R 
Sbjct: 130 HPVVREVCRLITLSSAWNPNFEGRLRHLLRS----------LKP-SLVCAVLRSQADERV 178

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDAL 275
            L   +   ++ + S   +P  + Y TL+D L K    + A  +   M  +  ++ P+A 
Sbjct: 179 ALNFFYWADRQWRYSH--HP--LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEA- 233

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
            +  ++  + R GK+  A +++  M+  G  PN+    T +    K  KL++A    + M
Sbjct: 234 -FGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERM 292

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +   +KPD + Y +LI  +C   R+++ALEL+  +  +GC  D V++  ++G LC+E KI
Sbjct: 293 QVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI 352

Query: 396 EEALGMLEKLWYD------------------------------------GIYLNKASYRI 419
           E+   ++EK+  D                                    G +++K  Y  
Sbjct: 353 EQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSA 412

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  CQKG +++A  L+  M  R   P   T   ++   C+ G  ++A   L  + + G
Sbjct: 413 IVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHG 472

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLD 508
            KP + S+  L+  +C   K L A E+++
Sbjct: 473 CKPNTVSYTALLNGLCHSGKSLEAREMIN 501


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 191/351 (54%), Gaps = 3/351 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P+    ++ + LL +  +V  A   ++    H ++  +  ++  ++   C +G L SA 
Sbjct: 326 EPNATVYTSVVALLCDKGRVSDALTVVEDMVHH-KVILDEAVYTTVLSGFCNKGDLVSAR 384

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
               EM++  ++  + +TY+TLI+GLC+ G  +EA ++ +EM+++ ++  D +TY VL+D
Sbjct: 385 RWFDEMQRKGLA-TDGVTYTTLINGLCRAGELKEAEKVLQEMLAR-RLDVDEVTYTVLVD 442

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+C+ GK+  A ++   M   G  PNV  YT L +G CK+G +Q A E+  EM N  L+ 
Sbjct: 443 GYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL 502

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +   Y +LIN  C+AG +D+A+  + +M   G K D+ T+  ++  LC+ G+++ A  +L
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +++  +GI     +Y +++N  C  G +E   +LL  ML +   P+  T N L+ + C  
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              +       G+     +P  +++ +L++  C+ R +  A    +E++ K
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK 673



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 173/311 (55%), Gaps = 5/311 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N C +NIL+K  C  G +E A ++  EM     S P+++TY  LI G C  G    A++L
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMA----SPPDVVTYGILIHGYCALGELENAVKL 316

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++MV++  + P+A  Y  ++   C  G+V  A  ++E M ++    +   YTT+++GFC
Sbjct: 317 LDDMVARG-VEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFC 375

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +G L  A+  FDEM+   L  D + YTTLIN  CRAG + EA ++L+EM  R    D V
Sbjct: 376 NKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEV 435

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+ +++ G C+ GK+ EA  +   +   G+  N  +Y  + +  C++G+++ A ELL  M
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +  T N L+  LCKAG  + A   +  +   G KP+  ++  L++ +C+  +L
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGEL 555

Query: 501 LFAFELLDELV 511
             A +LL E++
Sbjct: 556 DRAHDLLQEML 566



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 169/317 (53%), Gaps = 2/317 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q   L  +   +  LI   C+ G L+ A +VL+EM   ++   + +TY+ L+DG CK G+
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV-DEVTYTVLVDGYCKRGK 449

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA ++   MV +  + P+ +TY  L DG C+ G V  A +++  M N G   N   Y 
Sbjct: 450 MAEAFQVHNTMVQRG-VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYN 508

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +L+NG CK G L +A     +M    LKPD   YTTLI+  C++G +D A +LL+EM + 
Sbjct: 509 SLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDN 568

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K  IVT+N+++ G C  G++E    +LE +    I+ N  +Y  ++   C    ++  
Sbjct: 569 GIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKST 628

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            E+ + M  R   P+  T N L+   CKA   ++A      ++E GF+  + S++ L+ L
Sbjct: 629 TEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRL 688

Query: 494 ICRGRKLLFAFELLDEL 510
           + + +K + A +L  ++
Sbjct: 689 LNKKKKFVEARKLFHDM 705



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 202/426 (47%), Gaps = 10/426 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N   Y +++  L    +      V+  M +      E ++  ++  F N      
Sbjct: 323 RGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVS 382

Query: 149 VLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
               F ++    R+  +   ++  T +N L  + ++  A+  L+      RL  +   + 
Sbjct: 383 ARRWFDEMQ---RKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLAR-RLDVDEVTYT 438

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +L+  +CKRG +  AF+V   M +  ++ PN++TY+ L DGLCK G  + A EL  EM +
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVA-PNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K   L +A TYN LI+G C+ G +D+A + M  M   G  P+V+ YTTL++  CK G+L 
Sbjct: 498 KGLEL-NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELD 556

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A ++  EM +  +KP  + Y  L+N FC +GRV+   +LL+ M E+    +  T+N ++
Sbjct: 557 RAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
              C    ++    + + +    +  N+ +Y I++   C+   +++A      M+ +GF 
Sbjct: 617 KQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFR 676

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
              A+S   L+RL         A  LF  + + GF  E D +   ++       L     
Sbjct: 677 L-TASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLA 735

Query: 506 LLDELV 511
           L DELV
Sbjct: 736 LCDELV 741



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++KG   +  TY T+++ L R  + +  + VL++M        E  +  L+  +      
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK---R 447

Query: 147 ERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNT 202
            ++ E F ++H    ++   P++   +   + L +   V  A   L + SN+ L L  N 
Sbjct: 448 GKMAEAF-QVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL--NA 504

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
           C +N LI   CK G L+ A   + +M  + +  P++ TY+TLID LCK+G    A +L +
Sbjct: 505 CTYNSLINGLCKAGYLDQAMRTMADMDAAGLK-PDVYTYTTLIDALCKSGELDRAHDLLQ 563

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM+  + I P  +TYNVL++GFC  G+V+  KK++E+M     +PN   Y +LM  +C  
Sbjct: 564 EMLD-NGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
             ++   E++  M +  ++P+   Y  LI   C+A  + EA     EM E+G +    ++
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSY 682

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           + ++  L ++ K  EA  +   +  +G       Y   ++F+  +  LE  + L
Sbjct: 683 SALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLAL 736



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 7/189 (3%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA E+F  + +     +   Y  L+   C AGRV++A +L  EM       D+VT+ I
Sbjct: 247 LDEAIELFQGLPD----KNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGI 299

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C  G++E A+ +L+ +   G+  N   Y  V+   C KG +  A+ ++  M+   
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +   A    +L   C  G    A      +   G   +  ++  L+  +CR  +L  A 
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419

Query: 505 ELLDELVIK 513
           ++L E++ +
Sbjct: 420 KVLQEMLAR 428



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 7/161 (4%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +DEA+EL + + ++    ++ ++NI+L  LC  G++E+A  + +++       +  +Y I
Sbjct: 247 LDEAIELFQGLPDK----NVCSYNILLKVLCGAGRVEDARQLFDEMASPP---DVVTYGI 299

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C  GELE A++LL  M+ RG  P+      ++  LC  G   DA   +  +V   
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
              +   +  ++   C    L+ A    DE+  K   T  V
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV 400


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 182/327 (55%), Gaps = 6/327 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K +   ++ LI   C  G  +   ++L+EM    +  P+++T+S LID   K G+  EA
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVKEGKLLEA 363

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL+ EM+++  I PD +TYN LIDGFC+   +  A ++ + M + GC P++  Y+ L+N
Sbjct: 364 KELYNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            +CK  ++ +   +F E+ +  L P+TI Y TL+  FC++G+++ A EL +EM  RG   
Sbjct: 423 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 482

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT+ I+L GLC  G++ +AL + EK+    + L    Y I+++  C   +++ A  L 
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 542

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +  +G  P   T N ++  LCK G   +A +    + E G  P+  ++ +L+     G
Sbjct: 543 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 602

Query: 498 RKLLFAFELLDELVI----KESGTIQV 520
             L+ + EL++E+ +     +S TI++
Sbjct: 603 SGLISSVELIEEMKVCGFSADSSTIKM 629



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 175/333 (52%), Gaps = 5/333 (1%)

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
           + Q DL   F K    +  ++ +     I+I  +C++  L  AF VL    K  + Y P+
Sbjct: 112 TKQYDLVLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK--LGYEPD 168

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            IT+STL++G C  GR  EA+ L + MV   Q  PD +T + LI+G C  G+V  A  ++
Sbjct: 169 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSEALVLI 227

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   G  P+   Y  ++N  CK G    A ++F +M+   +K   + Y+ +I+  C+ 
Sbjct: 228 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 287

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G  D+AL L  EM+ +G KAD+VT++ ++GGLC +GK ++   ML ++    I  +  ++
Sbjct: 288 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 347

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++   ++G+L +A EL   M+ RG  P   T N L+   CK     +A      +V 
Sbjct: 348 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 407

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G +P+  ++++L+   C+ +++     L  E+
Sbjct: 408 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 440



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 2/316 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +P+T  F+ L+   C  G +  A  ++  M + +   P+L+T STLI+GLC  GR  
Sbjct: 163 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR-PDLVTVSTLINGLCLKGRVS 221

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA+ L + MV      PD +TY  +++  C+ G    A  +   M+      +V  Y+ +
Sbjct: 222 EALVLIDRMVEY-GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 280

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++  CK+G   +A  +F+EM+   +K D + Y++LI   C  G+ D+  ++L+EM  R  
Sbjct: 281 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 340

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VTF+ ++    +EGK+ EA  +  ++   GI  +  +Y  +++  C++  L +A +
Sbjct: 341 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 400

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +  LM+ +G  P   T + L+   CKA   +D       +   G  P + ++  LV   C
Sbjct: 401 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 460

Query: 496 RGRKLLFAFELLDELV 511
           +  KL  A EL  E+V
Sbjct: 461 QSGKLNAAKELFQEMV 476



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 179/352 (50%), Gaps = 17/352 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +FN + E KG   +  TY++++  L    K++    +LR+M           F  L+
Sbjct: 293 ALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F          E+++++  ITR    +   +   N LI+       +N L  +NQ   
Sbjct: 352 DVFVKEGKLLEAKELYNEM--ITR---GIAPDTITYNSLIDGF---CKENCLHEANQMFD 403

Query: 198 L------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           L      +P+   ++ILI  +CK   ++    + +E+  S+   PN ITY+TL+ G C++
Sbjct: 404 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS-SKGLIPNTITYNTLVLGFCQS 462

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+   A ELF+EMVS+  + P  +TY +L+DG C  G++++A +I E M+ +     +  
Sbjct: 463 GKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  +++G C   K+ +A  +F  + +  +KPD + Y  +I   C+ G + EA  L ++MK
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           E GC  D  T+NI++        +  ++ ++E++   G   + ++ ++V++ 
Sbjct: 582 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 633



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 132/242 (54%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD +T++ L++GFC  G+V  A  +++ M      P++   +TL+NG C +G++ EA  +
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            D M  +  +PD + Y  ++N  C++G    AL+L ++M+ER  KA +V ++I++  LC+
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +G  ++AL +  ++   GI  +  +Y  ++   C  G+ +   ++LR M+ R  +P   T
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 346

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + L+    K G   +A      ++  G  P++ ++  L++  C+   L  A ++ D +V
Sbjct: 347 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 406

Query: 512 IK 513
            K
Sbjct: 407 SK 408



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI+LFE M+ + + LP  + +N L     R  + D      + M+ NG   +++  
Sbjct: 79  KVNDAIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 137

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T ++N +C++ KL  A  V         +PDTI ++TL+N FC  GRV EA+ L+  M E
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 197

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              + D+VT + ++ GLC +G++ EAL +++++   G   ++ +Y  VLN  C+ G    
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 257

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLV 491
           A++L R M  R         + ++  LCK G  +D A++LF  +EM G K +  +++ L+
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD-ALSLFNEMEMKGIKADVVTYSSLI 316

Query: 492 ELICRGRKLLFAFELLDELV 511
             +C   K     ++L E++
Sbjct: 317 GGLCNDGKWDDGAKMLREMI 336


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 215/460 (46%), Gaps = 46/460 (10%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV 114
           ++S  +     +  +K E +   ALE F +++  K F H   TY  +++KLA  ++ + V
Sbjct: 36  EKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCV 95

Query: 115 DAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
             +L+QM  E     E +F++++  +      E+ L+ F+++                  
Sbjct: 96  QYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM------------------ 137

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
                              Q  R+KP   I+N ++         +    +   MKK  M 
Sbjct: 138 -------------------QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME 178

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN+ TY+ L+  LCKN R   A +L  EM SK    PD ++Y  LI   C+ GKV  A+
Sbjct: 179 -PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG-CDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 295 KI-MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           ++ M F       P+V  Y  L+NG CKE   +EA ++ DEM N  + P+ I YTT+IN 
Sbjct: 237 ELAMSF------TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
              AG V+ +L +L +M  RGC  ++ TF  ++ G   +G   EAL   +++  +G+  N
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +++  C K  L  A+ +   M   G  P+  T + L+    KAG  + A+    
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            ++  G  P   ++  +V+++CR      A+ L++ + ++
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVE 450



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 201/404 (49%), Gaps = 17/404 (4%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E F  + E   KG + N  +Y TI++ L+     E   AVL +M    C  +   F +L+
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLI 323

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           K F         L+ + ++    RE   P++ A +  ++ L     +  A +        
Sbjct: 324 KGFFLKGGSHEALDFWDRM---IREGVVPNVVAYNALMHGLCSKRSLGDAVSVF----NQ 376

Query: 196 LRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           + +    PN   ++ LI  + K G L+ A EV   M  +   +PN++ Y+ ++D LC+N 
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI-THGCHPNVVAYTCMVDVLCRNS 435

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
            F +A  L E M   +   P+ +T+N  I G C  G+VD A K+ + M N+GC PN   Y
Sbjct: 436 MFNQAYCLIENM-QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTY 494

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L++   K+ +  EA  +  +M++  ++ + + Y T+I  +C AG + EALELL +M  
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVV 554

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           RG K D +T NI++   C++GK+  A+ ++++L     + +  +Y  +++  C    +E+
Sbjct: 555 RGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE 614

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           AI  LR ML  G  P+ AT N +LVR   + M    A+     V
Sbjct: 615 AIVYLRRMLSEGISPNVATWN-VLVRHLFSNMGHSGAVQFLDAV 657



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 200/410 (48%), Gaps = 13/410 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG + +  +Y T++  L +  K +    +    T  +   +  +   + K ++     +
Sbjct: 209 SKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-PSVPVYNALINGVCKEYTFEEAFQ 267

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
            + EM +K        P++ + +T +N L ++  V+L+   L  +    R   PN   F 
Sbjct: 268 LLDEMMNK-----GIDPNVISYTTIINALSDAGNVELSLAVL--AKMFARGCSPNLHTFT 320

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LIK    +G    A +    M +  +  PN++ Y+ L+ GLC      +A+ +F +M  
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGV-VPNVVAYNALMHGLCSKRSLGDAVSVFNQM-E 378

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            +   P+  TY+ LIDG+ + G +D A ++  +M  +GC+PNV  YT +++  C+     
Sbjct: 379 INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A  + + M+     P+T+ + T I   C +GRVD A+++  +M   GC  +  T+N +L
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             L ++ +  EA G+++ + + GI LN  +Y  ++   C  G L +A+ELL  M+ RG  
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELIC 495
           P   T N ++   CK G   + AI L   +  G + P+  ++  L+  IC
Sbjct: 559 PDAITVNIVIDAYCKQGKV-NIAIQLMDRLSAGKWHPDIIAYTSLISGIC 607


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 178/317 (56%), Gaps = 5/317 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFE---VLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           + PN   +N LI  +CK G +   ++   +LKEM    +  PN +TY+ LIDG CK+   
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGIC-PNEVTYNILIDGFCKDENV 244

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A+ +F EM  +  + P+ +TYN+LI+G C  GKVD A  + + M ++   PNV  +  
Sbjct: 245 SGAMRVFGEM-QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV 303

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NGFCK   + EA  +F++M+   + P+ + YTTLI+ +C+ GR+++A  L   M +RG
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++ T+N ++ GLCR+G ++ A  ++ ++    +  +  +Y I+++  C+KGE  KA+
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +LL  M  +G  P + T N L+   C+ G    A I    +   G +    +  +L++  
Sbjct: 424 KLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGF 483

Query: 495 CRGRKLLFAFELLDELV 511
           C   +L  A  LL+E++
Sbjct: 484 CLKGRLEDANGLLNEML 500



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 170/293 (58%), Gaps = 2/293 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +NILI   CK   +  A  V  EM++  +  PN++TY+ LI+GLC +G+  EA+ 
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR-PNVVTYNILINGLCSDGKVDEAVA 284

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L ++MVS D + P+ +T+NVLI+GFC+   V+ A  +   M+  G +PN   YTTL++ +
Sbjct: 285 LRDQMVSSD-LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAY 343

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+G++++A  +++ M +  + P+   Y  LI   CR G V  A  L+ EM  +   AD+
Sbjct: 344 CKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV 403

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+NI++  LC++G+  +A+ +L++++  G+  +  +Y  +++  C++G L  A+ +   
Sbjct: 404 VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTR 463

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           M  +G   +  T N L+   C  G  EDA   L  ++E G  P   ++ ++ E
Sbjct: 464 MERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE 516



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 149/274 (54%), Gaps = 2/274 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q   L+PN   +NILI   C  G ++ A  +  +M  S +  PN++T++ LI+G CKN  
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE-PNVVTHNVLINGFCKNKT 313

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EAI LF +M  K  + P+A+TY  LID +C+ G+++ A  +   M + G  P V  Y 
Sbjct: 314 VNEAINLFNDM-EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYN 372

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G C++G ++ A+ + +EM +  L  D + Y  LI+  C+ G   +A++LL EM E+
Sbjct: 373 CLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEK 432

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G     VT+N ++ G CREG +  AL +  ++   G   N  ++ +++   C KG LE A
Sbjct: 433 GLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
             LL  ML RG +P+  T   +   + + G   D
Sbjct: 493 NGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 225/459 (49%), Gaps = 50/459 (10%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           L+    +P+  L  F    ++   +H+      IL+ LA  KK+  + + L +       
Sbjct: 5   LLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDK------- 57

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-- 185
                F+   K +S       V  +FH I        S+   S C+N ++ ++ + LA  
Sbjct: 58  -----FVKYEKDYS-------VSAIFHAI--------SMSGDSFCVNSIL-ADMLVLAFV 96

Query: 186 ---------QNFLKYSNQHLRLKPNTC--IFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
                    + F +  +   +L   +C  + + L+K   + G +E  +   +EM K ++ 
Sbjct: 97  RNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKES-ENGDMEFVY---REMIKRKIE 152

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC---RGGKVD 291
             N+I+++ +++GLCK G+   A ++ E+M     + P+ +TYN LIDG+C   R GK+ 
Sbjct: 153 L-NVISFNIVVNGLCKVGKLNRAGDVIEDM-KVWGVSPNVITYNTLIDGYCKMGRIGKMY 210

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
           +A  I++ M   G  PN   Y  L++GFCK+  +  A  VF EM+   L+P+ + Y  LI
Sbjct: 211 KADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILI 270

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C  G+VDEA+ L  +M     + ++VT N+++ G C+   + EA+ +   +   G+ 
Sbjct: 271 NGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD 330

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y  +++  C+ G +E A  L  +M+ RG  P  +T N L+  LC+ G  + A   
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  +V      +  ++ +L++ +C+  +   A +LLDE+
Sbjct: 391 MNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 173/317 (54%), Gaps = 5/317 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N+ + ++L+    +   +   FE  K          +LI+ + L+ GL K     +   +
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKL-SLISCNPLLSGLVKESENGDMEFV 142

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           + EM+ K +I  + +++N++++G C+ GK++RA  ++E MK  G +PNV  Y TL++G+C
Sbjct: 143 YREMI-KRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201

Query: 321 KEG---KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           K G   K+ +A  +  EM    + P+ + Y  LI+ FC+   V  A+ +  EM+ +G + 
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++VT+NI++ GLC +GK++EA+ + +++    +  N  ++ +++N  C+   + +AI L 
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G  P+  T   L+   CK G  EDA      +++ G  PE  ++  L+  +CR 
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 498 RKLLFAFELLDELVIKE 514
             +  A  L++E+V K+
Sbjct: 382 GDVKAARSLMNEMVSKK 398



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 164/351 (46%), Gaps = 46/351 (13%)

Query: 90  GFNHNNATYATILD---KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           G + N  TY T++D   K+ R  K    DA+L++M  +    +E  +  L+  F      
Sbjct: 185 GVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK---D 241

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           E V         + R+  +P++   +  +N L    +VD A   L+       L+PN   
Sbjct: 242 ENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVA-LRDQMVSSDLEPNVVT 300

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE-- 262
            N+LI   CK  T+  A  +  +M+K  +  PN +TY+TLID  CK+GR  +A  L+   
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVD-PNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 263 ---------------------------------EMVSKDQILPDALTYNVLIDGFCRGGK 289
                                            EMVSK ++  D +TYN+LID  C+ G+
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK-KLSADVVTYNILIDSLCKKGE 418

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
             +A K+++ M   G NP+   Y TLM+G+C+EG L+ A  V   M+    + + + +  
Sbjct: 419 SRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNV 478

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           LI  FC  GR+++A  LL EM ERG   +  T+ II   +  +G + +  G
Sbjct: 479 LIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIEG 529



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 40/285 (14%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K D  V   D  V +      ++H   I+     K    A+ +FN + E++G + N  TY
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM-EKQGVDPNAMTY 336

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
            T++D   +  + E   A+   M         GIF  +  +  NC            I  
Sbjct: 337 TTLIDAYCKDGRMEDAFALYNMM------IDRGIFPEVSTY--NCL-----------IAG 377

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
           + R K  +KA  + +N ++                   +L  +   +NILI   CK+G  
Sbjct: 378 LCR-KGDVKAARSLMNEMVSK-----------------KLSADVVTYNILIDSLCKKGES 419

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
             A ++L EM +  ++ P+ +TY+TL+DG C+ G  R A+ +   M  K +   + +T+N
Sbjct: 420 RKAVKLLDEMFEKGLN-PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK-QANVVTHN 477

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           VLI GFC  G+++ A  ++  M   G  PN   Y  +     ++G
Sbjct: 478 VLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 186/346 (53%), Gaps = 35/346 (10%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           K +   + ++I   CK G    A ++  EM  + +  P+++ YS+L+DGLC+ GR +EA+
Sbjct: 143 KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGI-LPDVVVYSSLMDGLCRFGRLKEAL 201

Query: 259 ELFEEM----VSKD------------------------------QILPDALTYNVLIDGF 284
           E F+EM    +S D                                 PDA T+ +LIDG 
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 261

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ GKV  A++I+E M + G  P++  Y TLMNG C  G+L++A ++F+ + +  +K + 
Sbjct: 262 CKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 321

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             Y  LIN +C+  ++DEA  L +EM+ +G K   VT+N ++G LC+ G++  A  +  +
Sbjct: 322 FSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G +L  ++Y ++L+  C+ G LE+AI+L + +      P+    + LL  +C+AG 
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            E+A      + + G +P++ ++ +L+  +C    L  A +LL ++
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 487



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 221/433 (51%), Gaps = 6/433 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+ ++E KG   +  TY  +++ L + +K   +   L +     CK     +  ++
Sbjct: 96  AVQLFDEMTE-KGLFGDAKTYGILINGLCKARK-TGLAIKLHEKMKGNCKGDVFTYGMII 153

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  +    L+MF ++       P +   S+ ++ L    ++  A  F K   +   
Sbjct: 154 DSLCKDGMTTEALDMFSEMIG-AGILPDVVVYSSLMDGLCRFGRLKEALEFFK-EMEGRG 211

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +  +   +N LI    + G  +     L  M     S P+  T++ LIDGLCK G+  EA
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS-PDAFTFTILIDGLCKEGKVGEA 270

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ E M  K +  PD LTYN L++G C  G+++ A K+ E + + G   NVF+Y  L+N
Sbjct: 271 QQILELMHHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK+ K+ EA  +F+EM+   LKP T+ Y TLI   C++GRV  A +L  EM+  G   
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            + T+ ++L GLC+ G +EEA+ + + +       N   + I+L+  C+ G+LE+A +  
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 449

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +   G  P     N L+  LC  GM  +A   L+ + E G  P+S ++ ++++ + + 
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509

Query: 498 RKLLFAFELLDEL 510
            ++  A +LL+E+
Sbjct: 510 NEIHEAIQLLEEM 522



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 154/275 (56%), Gaps = 2/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+ +T +TL+ G+       +A++LF+EM  K  +  DA TY +LI+G C+  K   A K
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKG-LFGDAKTYGILINGLCKARKTGLAIK 133

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + E MK N C  +VF Y  +++  CK+G   EA ++F EM    + PD + Y++L++  C
Sbjct: 134 LHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R GR+ EALE  KEM+ RG  AD+ T+N ++ GL R G  +E    L  +   G   +  
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 252

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++ I+++  C++G++ +A ++L LM  +G  P   T N L+  LC  G  EDA      L
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + G K    S+ +L+   C+ +K+  AF L +E+
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM 347



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 192/379 (50%), Gaps = 5/379 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ +    G   +   Y++++D L R+ + +      ++M           + +L+
Sbjct: 165 ALDMFSEMI-GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 223

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
              S   L + V   F  +       P     +  ++ L +  +V  AQ  L+  + H  
Sbjct: 224 HGLSRAGLWKEV-TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMH-HKG 281

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +P+   +N L+   C  G LE A ++ + +    +   N+ +Y+ LI+G CK+ +  EA
Sbjct: 282 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL-NVFSYNILINGYCKDQKIDEA 340

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LFEEM  K  + P  +TYN LI   C+ G+V  A+K+   M+  G    +  Y  L++
Sbjct: 341 FRLFEEMRPKG-LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 399

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G L+EA ++F  +K    KP+   ++ L++  CRAG+++EA +   E+ + G + 
Sbjct: 400 GLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEP 459

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D + +NI++ GLC +G + EA+ +L ++   G   +  ++ +++    ++ E+ +AI+LL
Sbjct: 460 DTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLL 519

Query: 438 RLMLCRGFLPHYATSNELL 456
             M  R F P  A ++ LL
Sbjct: 520 EEMRNRNFSPDEAVTSMLL 538



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 34/203 (16%)

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG----------- 388
            +PD +  TTL+        + +A++L  EM E+G   D  T+ I++ G           
Sbjct: 73  FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAI 132

Query: 389 -----------------------LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
                                  LC++G   EAL M  ++   GI  +   Y  +++  C
Sbjct: 133 KLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G L++A+E  + M  RG      T N L+  L +AG+ ++    L  +V+ GF P++ 
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 252

Query: 486 SWALLVELICRGRKLLFAFELLD 508
           ++ +L++ +C+  K+  A ++L+
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILE 275


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 186/350 (53%), Gaps = 38/350 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++PN   +N L++  CK      A E++++M  +   S P+L+TYSTL+ G CK G+  E
Sbjct: 41  IQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEE 100

Query: 257 AIELFEEMVSKDQILPDAL-----------------------------------TYNVLI 281
           + EL +E++S+  + PDAL                                   T+N LI
Sbjct: 101 SRELLKEVISRG-LRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLI 159

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G CR   ++ A  +++ M  +G   +V  Y TLM+G CK G+LQEA+++ + MK     
Sbjct: 160 SGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA 219

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + Y++ +   C++G+V  A ++L++M++     ++VT+N IL GLC+ GKI+ AL M
Sbjct: 220 PDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEM 279

Query: 402 LEKLWY-DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +E++   DG  LN   Y  V++  C+ G  ++A  ++  M   G  P   T + L+  LC
Sbjct: 280 MEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLC 339

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           KAG  E+A  A+  +   G KP + ++  LV  +C   +L  A  +++E+
Sbjct: 340 KAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 173/310 (55%), Gaps = 8/310 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    FN LI   C+   LE A  +L+ M  S +   +++TY+TL+DGLCK GR +EA +
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQTMAASGVK-ADVVTYNTLMDGLCKAGRLQEAEQ 208

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L E M +     PD + Y+  + G C+ GKV  A +++E M+++  +PNV  Y T+++G 
Sbjct: 209 LLERMKASG-CAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGL 267

Query: 320 CKEGKLQEAKEVFDEMKNF-LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           CK GK+  A E+ ++M +      + +GY+T+++  C+ GR  EA  +++ M   GC+ D
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VT++ ++ GLC+ GKIEEA+  + ++  +G   N  +Y  +++  C  G L +A  ++ 
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387

Query: 439 LMLCRGFL-----PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            M   G       P  +T N L+  LCKAG  +DA      +   G  P+  S++ +VE 
Sbjct: 388 EMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447

Query: 494 ICRGRKLLFA 503
           + R  + L A
Sbjct: 448 LARSGRALQA 457



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 163/287 (56%), Gaps = 3/287 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN +T++ L++G  K GR  +   L E M ++  I P+ ++YN L++G C+  +   A++
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARG-IQPNVVSYNGLLEGLCKLERWHEAEE 66

Query: 296 IMEFMKNNG--CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           ++  M + G    P++  Y+TL++G+CK GK++E++E+  E+ +  L+PD + YT ++  
Sbjct: 67  LVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMAS 126

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C++ R+ EALELL+EM   GC   ++TFN ++ G CRE  +E A  +L+ +   G+  +
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKAD 186

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +++  C+ G L++A +LL  M   G  P     +  +  LCK+G   +A   L 
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
            + +    P   ++  +++ +C+  K+  A E+++++   +   + V
Sbjct: 247 QMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 37/248 (14%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC PN   +  L+NGF K+G+  + + + + M    ++P+ + Y  L+   C+  R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 360 VDEALELLKEMKERGCKA--DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
             EA EL+++M  RG ++  D+VT++ +L G C+ GK+EE+  +L+++   G+  +   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 418 RIVL-----------------------------------NFSCQKGELEKAIELLRLMLC 442
             V+                                   +  C++  LE A  LL+ M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G      T N L+  LCKAG  ++A   L  +   G  P+  +++  V  +C+  K+L 
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 503 AFELLDEL 510
           A ++L+++
Sbjct: 241 AHQVLEQM 248



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 57/257 (22%)

Query: 41  DPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYAT 100
           DP V T +T +D   +S  I                 ALE+   ++   G   N   Y+T
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDT---------------ALEMMEQMASSDGCGLNVVGYST 298

Query: 101 ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPIT 160
           ++D L +  + +   +V+  M    C                                  
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGC---------------------------------- 324

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
             +P +   S+ +N L ++ +++ A   ++        KPN   +  L+   C  G L  
Sbjct: 325 --RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME-GCKPNAVTYCSLVHGLCSCGRLAE 381

Query: 221 AFEVLKEMKKSQMSY----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           A  +++EM           P++ TY+ LI GLCK GR  +A++ F+ M S+    PD ++
Sbjct: 382 AERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG-CDPDGVS 440

Query: 277 YNVLIDGFCRGGKVDRA 293
           Y+ +++G  R G+  +A
Sbjct: 441 YSTIVEGLARSGRALQA 457


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 234/475 (49%), Gaps = 50/475 (10%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +T +D   + R I  G                E+  +++  KG   N  +Y  +
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDG---------------FELLRSMA-LKGLEPNLISYNVV 281

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI--HPI 159
           ++ L R  + + +  VL +M        E  +  L+K +       + L M  ++  H +
Sbjct: 282 INGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRG 216
           +   PS+   ++ ++ + ++  ++ A  FL      +R++   PN   +  L+    ++G
Sbjct: 342 S---PSVITYTSLIHSMCKAGNMNRATEFL----DQMRVRGLCPNERTYTTLVDGFSQKG 394

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            +  A+ VLKEM  +  S P+++TY+ LI+G C  G+  +AI + E+M  K  + PD ++
Sbjct: 395 YMNEAYRVLKEMIDNGFS-PSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG-LTPDVVS 452

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y+ ++ GFCR   VD A ++   M   G  P+   Y++L+ GFC++ + +EA ++FDEM 
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              L PD   YT LIN +C  G + +A++L  EM E+G   D+VT+++++ GL ++ +  
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTR 572

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  +L KL+Y+    +  +Y  ++  +C   E +  + L++     GF           
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIE-NCSNIEFKSVVSLIK-----GF----------- 615

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              C  GM  +A      ++E   KP+  ++ +++   CRG  +  A+ L  E+V
Sbjct: 616 ---CMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 210/428 (49%), Gaps = 36/428 (8%)

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH--KIHPITREKPSLKA--------- 168
           Q TY+ C     +F  ++K +S   L ++ L + H  + H       S  A         
Sbjct: 124 QETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSK 183

Query: 169 --ISTCLNLLIESNQVDLAQNFLKYS----------NQHLRLK-----------PNTCIF 205
             IS   N+  E  Q  ++ N   Y+          N  + L+           PN   +
Sbjct: 184 RNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTY 243

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N LI  +CK   ++  FE+L+ M    +  PNLI+Y+ +I+GLC+ GR +E   +  EM 
Sbjct: 244 NTLIDGYCKLRKIDDGFELLRSMALKGLE-PNLISYNVVINGLCREGRMKEISFVLTEMN 302

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +   L D +TYN LI G+C+ G   +A  +   M  +G +P+V  YT+L++  CK G +
Sbjct: 303 KRGYSL-DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNM 361

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A E  D+M+   L P+   YTTL++ F + G ++EA  +LKEM + G    +VT+N +
Sbjct: 362 NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G C  GK+ +A+ +LE +   G+  +  SY  VL+  C+  ++++A+ + R M+ +G 
Sbjct: 422 INGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI 481

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   T + L+   C+    ++A      ++ +G  P+  ++  L+   C    L  A +
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQ 541

Query: 506 LLDELVIK 513
           L +E+V K
Sbjct: 542 LHNEMVEK 549



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 171/318 (53%), Gaps = 2/318 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+PN   +N++I   C+ G ++    VL EM K   S    +TY+TLI G CK G F +A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDE-VTYNTLIKGYCKEGNFHQA 329

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + +  EM+ +  + P  +TY  LI   C+ G ++RA + ++ M+  G  PN   YTTL++
Sbjct: 330 LVMHAEML-RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVD 388

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF ++G + EA  V  EM +    P  + Y  LIN  C AG++ +A+ +L++MKE+G   
Sbjct: 389 GFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTP 448

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V+++ +L G CR   ++EAL +  K+   GI  +  +Y  ++   C++   ++A +L 
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLF 508

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             ML  G  P   T   L+   C  G  + A      +VE G  P+  ++++L+  + + 
Sbjct: 509 DEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 498 RKLLFAFELLDELVIKES 515
            +   A  LL +L  +ES
Sbjct: 569 ARTREAKRLLLKLFYEES 586



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 171/316 (54%), Gaps = 5/316 (1%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR-FREAIEL 260
           + +F++++K + +   ++ A  ++  + ++    P +++Y+ ++D   ++ R    A  +
Sbjct: 134 SSVFDLVVKSYSRLCLIDKALSIV-HLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+EM+ + Q+ P+  TYN+LI GFC  G +D A +  + M+  GC PNV  Y TL++G+C
Sbjct: 193 FKEML-QSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  K+ +  E+   M    L+P+ I Y  +IN  CR GR+ E   +L EM +RG   D V
Sbjct: 252 KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N ++ G C+EG   +AL M  ++   G+  +  +Y  +++  C+ G + +A E L  M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG  P+  T   L+    + G   +A   L  +++ GF P   ++  L+   C   K+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431

Query: 501 LFAFELLDELVIKESG 516
           + A  +L+++  KE G
Sbjct: 432 VDAIAVLEDM--KEKG 445



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 178/380 (46%), Gaps = 29/380 (7%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY T++D  ++         VL++M         G   +++ + +  + H  
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEM------IDNGFSPSVVTYNALINGHCI 427

Query: 149 VLEMFHKIHPI--TREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
             +M   I  +   +EK   P + + ST L+    S  VD A   +K       +KP+T 
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALR-VKRKMVAKGIKPDTI 486

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            ++ LI+  C++   + A ++  EM +  +  P+  TY+ LI+  C  G  ++AI+L  E
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLP-PDEFTYTALINAYCMEGDLQKAIQLHNE 545

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM------- 316
           MV K  +LPD +TY+VLI+G  +  +   AK+++  +      P+   Y TL+       
Sbjct: 546 MVEKG-VLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604

Query: 317 --------NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                    GFC +G + EA +VF+ M     KPD   Y  +I+  CR G + +A  L K
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYK 664

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM + G     VT   ++  L +EGK+ E   ++  +            ++++  + ++G
Sbjct: 665 EMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREG 724

Query: 429 ELEKAIELLRLMLCRGFLPH 448
            ++  +++L  M   GFLP+
Sbjct: 725 NMDVVLDVLAEMAKDGFLPN 744


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 181/321 (56%), Gaps = 4/321 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + +KPN   +  +I   CK G ++   E+  EMK   +S P+++ YS++I G+C  GR+ 
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGIS-PDVVAYSSIIHGMCHTGRWE 290

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A  LF EMV  + + P+ +T+NVLID  C+ GK++ A  +++ M   G +P+ F Y TL
Sbjct: 291 GAKGLFNEMVD-EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTL 349

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++GFC EG++ +A+++F  M++  ++ D + Y  LIN +C++GR+ EA +L +EM  +  
Sbjct: 350 IDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEI 409

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
              ++T+N +L GL REGK+ +A  +  ++    +     +Y I+L+  C+   L +A+E
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   +    F P     N L+  LCKA   E A      L   G +P   ++ +++  +C
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 496 RGRKLLFAFELLDELVIKESG 516
           +  +L  A +L   L ++E G
Sbjct: 530 KSGQLENAKDLF--LGMEEKG 548



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 183/353 (51%), Gaps = 41/353 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM----------------------------- 228
           L P+    NILI  +C    ++    VL EM                             
Sbjct: 123 LAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEAT 182

Query: 229 ----KKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-----QILPDALTYN 278
               K  +M Y PN++TY TL++GLC  G    A++L EEM++ +      I P+ + Y 
Sbjct: 183 GLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYC 242

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            +ID  C+ G +D+ K++   MK  G +P+V  Y+++++G C  G+ + AK +F+EM + 
Sbjct: 243 TIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDE 302

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            + P+ + +  LI+  C+AG+++EA  LLK M +RG   D  T+N ++ G C EG+I++A
Sbjct: 303 GVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDA 362

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             +   +   GI  +  SY +++N  C+ G + +A +L R M+C+  +P   T N LL  
Sbjct: 363 RDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTG 422

Query: 459 LCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           L + G   DA   LFG +++    PES ++ +L++ +C+   L  A EL   L
Sbjct: 423 LFREGKVRDAW-NLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYL 474



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 168/302 (55%), Gaps = 2/302 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   FN+LI   CK G +E A  +LK M +   S P+  TY+TLIDG C  GR  +A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGES-PDTFTYNTLIDGFCLEGRIDDA 362

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF  M SK  I  DA++YNVLI+G+C+ G++  AKK+   M      P V  Y TL+ 
Sbjct: 363 RDLFVSMESKG-IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLT 421

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  +EGK+++A  +F EMK   L P++  Y  L++  C+   + EA+EL   ++    + 
Sbjct: 422 GLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            I  FN ++ GLC+  KIE A  +  +L ++G+  N  +Y ++++  C+ G+LE A +L 
Sbjct: 482 SIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLF 541

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G  P+  T N L+   C+    +     L  + E  F P++ + +++V+L+ + 
Sbjct: 542 LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKD 601

Query: 498 RK 499
            K
Sbjct: 602 EK 603



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 188/356 (52%), Gaps = 4/356 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G + +   Y++I+  +    ++E    +  +M  E    +   F  L+         E 
Sbjct: 267 RGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEE 326

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              +  K+     E P     +T ++      ++D A++    S +   ++ +   +N+L
Sbjct: 327 ANHLL-KLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLF-VSMESKGIETDAVSYNVL 384

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I  +CK G +  A ++ +EM   ++  P +ITY+TL+ GL + G+ R+A  LF EM   D
Sbjct: 385 INGYCKSGRMVEAKKLYREMMCKEI-MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + P++ TYN+L+DG C+   +  A ++  +++N+   P++  +  L++G CK  K++ A
Sbjct: 444 -LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA 502

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           +E+F+ + +  L+P+ I YT +I+  C++G+++ A +L   M+E+GC  ++VTFN ++ G
Sbjct: 503 RELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG 562

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            C+  ++++ + +L+++       + ++  IV++   +  +  + + LL     +G
Sbjct: 563 FCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 265 VSKDQI--LPDALTYNVLIDGFCRGGKVDRAKKIMEF--MKNNGCNPNVFNYTTLMNGFC 320
           ++KD +   PD       +   C+ G + R++    F  + +    P + ++ TL+    
Sbjct: 44  LTKDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVA 103

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  +  +   ++  M    L PD I    LINC+C   +VD  L +L EM  RG   + V
Sbjct: 104 KIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTV 163

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TF  ++ GLC   +I EA G+L K+   G   N  +Y  +LN  C  G    A++L   M
Sbjct: 164 TFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEM 223

Query: 441 L--CRGF----LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           L    GF     P+      ++  LCK G+ +        +   G  P+  +++ ++  +
Sbjct: 224 LNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGM 283

Query: 495 CRGRKLLFAFELLDELV 511
           C   +   A  L +E+V
Sbjct: 284 CHTGRWEGAKGLFNEMV 300



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 2/177 (1%)

Query: 342 PDTIGYTTLINCFCRAGRV--DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           PD       +   C++G +   EA  +   + +      I +FN +LG + +  +  + +
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            + +++   G+  +  +  I++N  C   +++  + +L  ML RG  P+  T   L+  L
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           C      +A   L  +V MG++P   ++  L+  +C     + A +L +E++    G
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGG 229


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 207/411 (50%), Gaps = 6/411 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G + N  T + +++  +  ++ +   +VL ++     +     F  L+         
Sbjct: 125 ELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKF 184

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            + +E+F  +  + R  +P +   +T +N L +  +   A   LK   +    +PN   +
Sbjct: 185 AQAMELFDDM--VARGCRPDVYTYTTIINGLCKIGETAAAAGLLK-KMEEAGCQPNVVTY 241

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           + +I  H K   +  A ++   MK   +S P++ TY++LI GLC   +++EA  L  EM 
Sbjct: 242 STIIDSHRKDRRVNEALDIFSYMKVKGIS-PDIFTYNSLIQGLCNFSQWKEASALLNEMR 300

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           S + I+PD +T+NVL+D  C+ GKV  A+ +++ M   G  P+V  Y++LM G+    ++
Sbjct: 301 SLN-IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA+++FD M     KPD   Y  LIN +C+  R+DEA +L  EM  +G   + V++N +
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC+ G + EA  + + +  +G   N  +Y I+L+  C++G   KA  L R M     
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            P+    N L+  +CK+G   DA      L   G +P +  +  ++  +C+
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCK 530



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 207/415 (49%), Gaps = 16/415 (3%)

Query: 104 KLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPIT 160
           K+ +Y  ++ V ++ +QM         +   I +N   H     L   VL    K+    
Sbjct: 109 KMGQY--YDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGL-- 164

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLE 219
             +P++   +T +N L +  +   AQ    + +   R  +P+   +  +I   CK G   
Sbjct: 165 --QPTIVTFTTLINWLCKVGK--FAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETA 220

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           +A  +LK+M+++    PN++TYST+ID   K+ R  EA+++F  M  K  I PD  TYN 
Sbjct: 221 AAAGLLKKMEEAGCQ-PNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKG-ISPDIFTYNS 278

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI G C   +   A  ++  M++    P++  +  L++  CKEGK+ EA+ V   M    
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           ++PD + Y++L+  +     V EA +L   M  +GCK D+ ++NI++ G C+  +I+EA 
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +  ++ + G+  N  SY  +++  CQ G L +A  L + M   G LP+  T + LL   
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGF 458

Query: 460 CKAGMAEDAAIALFGLVEMGF-KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           CK G     A  LF  ++  + KP    + +L++ +C+   L  A +L  EL +K
Sbjct: 459 CKQGYF-GKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 198/411 (48%), Gaps = 42/411 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F+ +   +G   +  TY TI++ L +  +  A   +L++M    C+ +   +  ++
Sbjct: 187 AMELFDDMVA-RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTII 245

Query: 138 KHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                       L++F   K+  I+   P +   ++ +  L   +Q   A   L    + 
Sbjct: 246 DSHRKDRRVNEALDIFSYMKVKGIS---PDIFTYNSLIQGLCNFSQWKEASALLN-EMRS 301

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK----------SQMSY---------- 235
           L + P+   FN+L+   CK G +  A  VLK M +          S + Y          
Sbjct: 302 LNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE 361

Query: 236 --------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
                         P++ +Y+ LI+G CK  R  EA +LF EM+ +  + P+ ++YN LI
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG-LTPNNVSYNTLI 420

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G +  A+ + + M  NG  PN+F Y+ L++GFCK+G   +A  +F  M++   K
Sbjct: 421 HGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSK 480

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ + Y  LI+  C++G + +A +L  E+  +G + +   +  I+ GLC+EG ++EAL  
Sbjct: 481 PNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEA 540

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
              +  DG   ++ SY +++       +  +A++L+  M  +GF+    T+
Sbjct: 541 FRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTT 591



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 168/322 (52%), Gaps = 5/322 (1%)

Query: 193 NQHLRLKPNTCI--FNILIKHHCKRGTL-ESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           N  L  KP  CI  F  L+    K G   ++   + K+M+ + +S PN+ T S LI+   
Sbjct: 86  NHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLS-PNIYTLSILINCFS 144

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
              R   A  +  +++ K  + P  +T+  LI+  C+ GK  +A ++ + M   GC P+V
Sbjct: 145 HLQRVDLAFSVLAKII-KLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDV 203

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           + YTT++NG CK G+   A  +  +M+    +P+ + Y+T+I+   +  RV+EAL++   
Sbjct: 204 YTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSY 263

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           MK +G   DI T+N ++ GLC   + +EA  +L ++    I  +  ++ ++++  C++G+
Sbjct: 264 MKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGK 323

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           + +A  +L+ M   G  P   T + L+          +A      ++  G KP+  S+ +
Sbjct: 324 VSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383

Query: 490 LVELICRGRKLLFAFELLDELV 511
           L+   C+ +++  A +L +E++
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMI 405



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 144/278 (51%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +I ++ L+  + K G++ + +    + +    + P+  T ++LI+ F    +VD A  
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   G  P +  +TTL+N  CK GK  +A E+FD+M     +PD   YTT+IN  C
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G    A  LLK+M+E GC+ ++VT++ I+    ++ ++ EAL +   +   GI  +  
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  ++   C   + ++A  LL  M     +P   T N L+  +CK G   +A   L  +
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            EMG +P+  +++ L+       +++ A +L D ++ K
Sbjct: 335 TEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 228/433 (52%), Gaps = 16/433 (3%)

Query: 96  ATYATILDKLA-RYKKFEAVDAVLRQMTY--ETCKFHEGIFLNLMKHFSNCSLHERVLEM 152
            T +T+++ L  + +  EA+  + R + Y  +  +   G  LN +    N +L    L++
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL---ALDL 232

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKH 211
           F K+      K S+   S  ++ L +    D A +   ++   ++ +K +   ++ LI  
Sbjct: 233 FRKMEE-RNIKASVVQYSIVIDSLCKDGSFDDALSL--FNEMEMKGIKADVVTYSSLIGG 289

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C  G  +   ++L+EM    +  P+++T+S LID   K G+  EA EL+ EM+++  I 
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIA 347

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD +TYN LIDGFC+   +  A ++ + M + GC P++  Y+ L+N +CK  ++ +   +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F E+ +  L P+TI Y TL+  FC++G+++ A EL +EM  RG    +VT+ I+L GLC 
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G++ +AL + EK+    + L    Y I+++  C   +++ A  L   +  +G  P   T
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N ++  LCK G   +A +    + E G  P+  ++ +L+     G  L+ + EL++E+ 
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587

Query: 512 I----KESGTIQV 520
           +     +S TI++
Sbjct: 588 VCGFSADSSTIKM 600



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 175/333 (52%), Gaps = 5/333 (1%)

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
           + Q DL   F K    +  ++ +     I+I  +C++  L  AF VL    K  + Y P+
Sbjct: 83  TKQYDLVLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK--LGYEPD 139

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            IT+STL++G C  GR  EA+ L + MV   Q  PD +T + LI+G C  G+V  A  ++
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSEALVLI 198

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M   G  P+   Y  ++N  CK G    A ++F +M+   +K   + Y+ +I+  C+ 
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G  D+AL L  EM+ +G KAD+VT++ ++GGLC +GK ++   ML ++    I  +  ++
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++   ++G+L +A EL   M+ RG  P   T N L+   CK     +A      +V 
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G +P+  ++++L+   C+ +++     L  E+
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 2/316 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +P+T  F+ L+   C  G +  A  ++  M + +   P+L+T STLI+GLC  GR  
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR-PDLVTVSTLINGLCLKGRVS 192

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA+ L + MV      PD +TY  +++  C+ G    A  +   M+      +V  Y+ +
Sbjct: 193 EALVLIDRMVEY-GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++  CK+G   +A  +F+EM+   +K D + Y++LI   C  G+ D+  ++L+EM  R  
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VTF+ ++    +EGK+ EA  +  ++   GI  +  +Y  +++  C++  L +A +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +  LM+ +G  P   T + L+   CKA   +D       +   G  P + ++  LV   C
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431

Query: 496 RGRKLLFAFELLDELV 511
           +  KL  A EL  E+V
Sbjct: 432 QSGKLNAAKELFQEMV 447



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 179/352 (50%), Gaps = 17/352 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +FN + E KG   +  TY++++  L    K++    +LR+M           F  L+
Sbjct: 264 ALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F          E+++++  ITR    +   +   N LI+       +N L  +NQ   
Sbjct: 323 DVFVKEGKLLEAKELYNEM--ITR---GIAPDTITYNSLIDGF---CKENCLHEANQMFD 374

Query: 198 L------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           L      +P+   ++ILI  +CK   ++    + +E+  S+   PN ITY+TL+ G C++
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS-SKGLIPNTITYNTLVLGFCQS 433

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+   A ELF+EMVS+  + P  +TY +L+DG C  G++++A +I E M+ +     +  
Sbjct: 434 GKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  +++G C   K+ +A  +F  + +  +KPD + Y  +I   C+ G + EA  L ++MK
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           E GC  D  T+NI++        +  ++ ++E++   G   + ++ ++V++ 
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 132/242 (54%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD +T++ L++GFC  G+V  A  +++ M      P++   +TL+NG C +G++ EA  +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            D M  +  +PD + Y  ++N  C++G    AL+L ++M+ER  KA +V ++I++  LC+
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +G  ++AL +  ++   GI  +  +Y  ++   C  G+ +   ++LR M+ R  +P   T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + L+    K G   +A      ++  G  P++ ++  L++  C+   L  A ++ D +V
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377

Query: 512 IK 513
            K
Sbjct: 378 SK 379



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +AI+LFE M+ + + LP  + +N L     R  + D      + M+ NG   +++  
Sbjct: 50  KVNDAIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T ++N +C++ KL  A  V         +PDTI ++TL+N FC  GRV EA+ L+  M E
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              + D+VT + ++ GLC +G++ EAL +++++   G   ++ +Y  VLN  C+ G    
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLV 491
           A++L R M  R         + ++  LCK G  +D A++LF  +EM G K +  +++ L+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD-ALSLFNEMEMKGIKADVVTYSSLI 287

Query: 492 ELICRGRKLLFAFELLDELV 511
             +C   K     ++L E++
Sbjct: 288 GGLCNDGKWDDGAKMLREMI 307


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 229/463 (49%), Gaps = 24/463 (5%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATY-----------------ATILDKLARYK 109
           +L+K + +P+ AL+ F     + GF H   +Y                 + I + +   +
Sbjct: 100 ALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGR 159

Query: 110 KFEAVDAV-LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
           +F   D   +   T   C+   G+F  L     +  + E   + F K++   R  P +++
Sbjct: 160 EFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKF-RVLPKVRS 218

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +  L+ L +S++  LA +F K       L P+   +N++I    + G LE+A  + +EM
Sbjct: 219 CNELLHRLSKSSKGGLALSFFK-DMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM 277

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-ILPDALTYNVLIDGFCRG 287
           K   +  P+++TY++LIDG  K G    A+ +FEEM  KD    PD +TYN LI+ FC+ 
Sbjct: 278 KAKGLR-PDIVTYNSLIDGYGKVGMLTGAVSVFEEM--KDAGCEPDVITYNSLINCFCKF 334

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            ++ +A + +  MK  G  PNV  Y+TL++ FCK G L EA + F +M    L+P+   Y
Sbjct: 335 ERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTY 394

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T+LI+  C+ G ++EA +L  EM++ G   +IVT+  +L GLC +G++ EA  +   L  
Sbjct: 395 TSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLK 454

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G  LN+  Y  + +   +   +EKA+++L  M  +   P        +  LC+    ED
Sbjct: 455 AGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIED 514

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +   +  +++ G    S  +  L++   +  K   A  LL E+
Sbjct: 515 SMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEM 557



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 233/468 (49%), Gaps = 10/468 (2%)

Query: 48  DTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
           D  V     S F ++   I  +  E + + A  +F  + + KG   +  TY +++D   +
Sbjct: 241 DMVVAGLSPSVF-TYNMVIGCLAREGDLEAARSLFEEM-KAKGLRPDIVTYNSLIDGYGK 298

Query: 108 YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPS 165
                   +V  +M    C+     + +L+  F      ER+ + F  +H + +   +P+
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK---FERIPQAFEYLHGMKQRGLQPN 355

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           +   ST ++   ++  +  A  F       + L+PN   +  LI  +CK G L  AF++ 
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFF-VDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
            EM+++ ++  N++TY+ L+DGLC++GR REA ELF  ++     L   + Y  L  G+ 
Sbjct: 415 SEMQQAGVNL-NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQI-YTSLFHGYI 472

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           +   +++A  I+E M      P++  Y T + G C++ +++++  V  EM +  L  ++ 
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YTTLI+ + + G+  EA+ LL+EM++ G K  +VT+ +++ GLC+ G +++A+   + +
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM 592

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
             +G+  N   Y  +++  C+   LE+A  L   ML +G  P       L+    K G  
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP 652

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +A      +VE+G + +  ++  L+    R  ++  A  LLDE++ K
Sbjct: 653 GEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRK 700



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 185/390 (47%), Gaps = 49/390 (12%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +Q G N N  TY  +LD L         D  +R+         E +F  L+K  +  +L+
Sbjct: 418 QQAGVNLNIVTYTALLDGLCE-------DGRMREA--------EELFGALLK--AGWTLN 460

Query: 147 ERVL-EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           +++   +FH                      I++  ++ A + L+  N+   LKP+  ++
Sbjct: 461 QQIYTSLFHGY--------------------IKAKMMEKAMDILEEMNKK-NLKPDLLLY 499

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
              I   C++  +E +  V++EM    ++  N   Y+TLID   K G+  EA+ L +EM 
Sbjct: 500 GTKIWGLCRQNEIEDSMAVIREMMDCGLT-ANSYIYTTLIDAYFKVGKTTEAVNLLQEM- 557

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
               I    +TY VLIDG C+ G V +A +  + M  NG  PN+  YT L++G CK   L
Sbjct: 558 QDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCL 617

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EAK +F+EM +  + PD + YT+LI+   + G   EAL L   M E G + D+  +  +
Sbjct: 618 EEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSL 677

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G  R G+++ A  +L+++   GI  ++     +L    + G++ +A+ L   M  RG 
Sbjct: 678 IWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737

Query: 446 L--------PHYATSNELLVRLCKAGMAED 467
           +        P   T+   L +LC +    D
Sbjct: 738 ISGTIDITVPSCLTAVTKLHKLCASQSGTD 767


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 207/423 (48%), Gaps = 8/423 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G  HN  T   +++      +     +VL  +     +     F  L++           
Sbjct: 84  GIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEA 143

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           L++F K+   T E  +P +    T +N L +      A  FL+   Q    +P   +++ 
Sbjct: 144 LQLFDKM---TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR-NCRPTVVVYST 199

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK   L  A  +  +M    +S PN  TYS+LI GLC  G ++EAI LF  M+ +
Sbjct: 200 IIDSLCKDRQLTEALSLFSDMLAKGIS-PNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 258

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I+PD LT+N L+D  C+ G V +A  +++ M  +   P+V  Y +LM+G C   ++ +
Sbjct: 259 -KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGK 317

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
              VFD M      P  I YTTLIN +C+   +D+A+ L +EM ++G   D VT+N ++ 
Sbjct: 318 TVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIH 377

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC  G++ +A+ +  ++   G   +  +YRI+ ++ C+   L +A+ LL+++      P
Sbjct: 378 GLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP 437

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                + ++  +C+AG  E A      L   G  P+  ++ +++  +C+   L  A +L 
Sbjct: 438 DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 497

Query: 508 DEL 510
            E+
Sbjct: 498 GEM 500



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 205/418 (49%), Gaps = 7/418 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ ++ + GF  +  TY T+++ L +          LR M    C+    ++  ++
Sbjct: 143 ALQLFDKMTGE-GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                       L +F  +        +    S    L I  +  +  + F  Y+  H +
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLF--YAMIHRK 259

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   FN L+   CK G +  A  V+  M +S +  P+++TY++L+DG C      + 
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLK-PDVVTYNSLMDGHCLRSEMGKT 318

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + +F+ MV K  + P  ++Y  LI+G+C+   +D+A  + E M   G  P+   Y TL++
Sbjct: 319 VNVFDTMVRKGCV-PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIH 377

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  G+L++A  +F EM  +   PD + Y  L +  C+  R+ EA+ LLK ++      
Sbjct: 378 GLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP 437

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI  ++I++ G+CR G++E A  +  KL   G++ +  +Y I++N  CQ+G L +A +L 
Sbjct: 438 DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 497

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELI 494
             M   G  P+  T N L+ R          AI LF  ++  GF  +  +  LLVE++
Sbjct: 498 GEMDENGCSPNACTYN-LITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 15/371 (4%)

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           SL  R+L M        R  PS+   S  L  +          +  K  +    +  NT 
Sbjct: 40  SLFNRMLRM--------RPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS-FGIPHNTY 90

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFE 262
             NILI   C    L  AF VL ++ K  + Y P+  T++TLI GLC  G+  EA++LF+
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILK--LGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           +M + +   PD LTY  LI+G C+ G    A + +  M+   C P V  Y+T+++  CK+
Sbjct: 149 KM-TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD 207

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            +L EA  +F +M    + P+   Y++LI+  C  G   EA+ L   M  R    D +TF
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 267

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++  LC+EG + +A  +++ +    +  +  +Y  +++  C + E+ K + +   M+ 
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR 327

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLL 501
           +G +P   +   L+   CK  +  D A+ LF  + + G  P++ ++  L+  +C   +L 
Sbjct: 328 KGCVPSVISYTTLINGYCKIQIM-DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386

Query: 502 FAFELLDELVI 512
            A  L  E+V+
Sbjct: 387 DAIALFHEMVV 397



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 185/383 (48%), Gaps = 6/383 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           EQ+        Y+TI+D L + ++     ++   M  +    +   + +L+         
Sbjct: 186 EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 245

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           +  + +F+ +  I R+  P     +T ++ L +   V  A   +    Q   LKP+   +
Sbjct: 246 KEAIRLFYAM--IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS-DLKPDVVTY 302

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N L+  HC R  +     V   M + +   P++I+Y+TLI+G CK     +A+ LFEEM 
Sbjct: 303 NSLMDGHCLRSEMGKTVNVFDTMVR-KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEM- 360

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           S+  ++PD +TYN LI G C  G++  A  +   M   G  P++  Y  L +  CK  +L
Sbjct: 361 SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRL 420

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA  +   ++   L PD   Y+ +++  CRAG ++ A +L  ++  +G   D+ T+ I+
Sbjct: 421 AEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIM 480

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC++G + EA  +  ++  +G   N  +Y ++     +  E  +AI+L + ML RGF
Sbjct: 481 INGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGF 540

Query: 446 LPHYATSNELLVRLCKAGMAEDA 468
               +T+  L+  L   G+ +  
Sbjct: 541 SIDVSTTTLLVEMLSDDGLDQSV 563



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 153/297 (51%), Gaps = 2/297 (0%)

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           T++ A  +   M + +   P+++ +S L+  + +   +   + L+++M S   I  +  T
Sbjct: 34  TIDDALSLFNRMLRMRPP-PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFG-IPHNTYT 91

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
            N+LI+ FC   ++  A  ++  +   G  P+   +TTL+ G C EGK+ EA ++FD+M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +PD + Y TLIN  C+ G    A+  L+ M++R C+  +V ++ I+  LC++ ++ 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EAL +   +   GI  N  +Y  +++  C  G  ++AI L   M+ R  +P   T N L+
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             LCK GM   A   +  +++   KP+  ++  L++  C   ++     + D +V K
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 233/468 (49%), Gaps = 31/468 (6%)

Query: 49  TCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARY 108
           T V     S  + H     L   E +P   L  F    ++ G  HN   +  +L  LA  
Sbjct: 66  TIVKETNPSSLLQH-----LFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANA 120

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
           K +  + A+L                    H+SN ++       FH +  +     +   
Sbjct: 121 KNYNKIRALLDSFAKNA-------------HYSNSTI-------FHSLSVLGSWGCANSI 160

Query: 169 ISTCLNL-LIESNQVDLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           I   L    +++ ++DLA + F +  +   RL   +C  N ++    K G +     V K
Sbjct: 161 IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSC--NPMLVSLVKEGRIGVVESVYK 218

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
           EM + ++   N++T+  +I+GLCK G+F++A ++ E+M +     P  +TYN +IDG+C+
Sbjct: 219 EMIRRRIGV-NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG-FSPSVITYNTIIDGYCK 276

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            GK+ +A  +++ M     +PN   +  L++GFC++  +  AK+VF+EM+   L+P+ + 
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y +LIN  C  G++DEAL L  +M   G K ++VT+N ++ G C++  ++EA  ML+ + 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+  N  ++  +++   + G ++ A  L  +ML  G  P+ +T N L+V  C+ G  +
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +A      +   G K +  ++ +LV+ +C+  +   A  LLDE+ + E
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLME 504



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 173/345 (50%), Gaps = 48/345 (13%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF---SNCSLH 146
           GF+ +  TY TI+D   +  K    DA+L++M  +    +E  F  L+  F    N +  
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           ++V E                                          Q   L+PN   +N
Sbjct: 319 KKVFEEM----------------------------------------QRQGLQPNVVTYN 338

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   C  G L+ A  +  +M    +  PN++TY+ LI+G CK    +EA E+ ++ + 
Sbjct: 339 SLINGLCSNGKLDEALGLQDKMSGMGLK-PNVVTYNALINGFCKKKMLKEAREMLDD-IG 396

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + P+ +T+N LID + + G++D A  +   M + G  PNV  Y  L+ GFC+EG ++
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM---KERGCKADIVTFN 383
           EA+++  EM+   LK D + Y  L++  C+ G   +A+ LL EM   +++G +A+IVT+N
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYN 516

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           +++ G C +GK+EEA  +L ++   G+  N+ +Y I+ +   +KG
Sbjct: 517 VLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 219/457 (47%), Gaps = 30/457 (6%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E F+++  Q G + N  TY  ++D L +  K +    +LR    +   F    F +L+
Sbjct: 230 AYEFFDSMP-QTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFA---FSSLL 285

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    E  +++   +  +    P++   ++ +N L ++ +VD A        +   
Sbjct: 286 HGLCQAHRLEEAIQLLKAMPCV----PNVVCFNSLMNGLCQARRVDEAFELFDVMKES-G 340

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
              +   +NIL+K  CK   +  A+  ++ M++++   PN++T+STLI GLC  GR  +A
Sbjct: 341 CSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQA 400

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME------------------- 298
            E++E MV+ + I P+  TY  L++G C+ G   R ++  E                   
Sbjct: 401 WEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPE 460

Query: 299 --FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
             F+    C P +  Y TL+ G  K G +++A  + + M    L PD I + ++++  C+
Sbjct: 461 VDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK 520

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
             R+ +A  + K   ERGC+ ++VT++ ++ GL +  K++EAL +L K+   G   N  +
Sbjct: 521 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 580

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  V++   + G +E A+ +LR M   G LP   T N L+    K     +A   L  ++
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 640

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           E GF P   ++  L   +CR  +   A E+LD +  +
Sbjct: 641 EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 227/513 (44%), Gaps = 25/513 (4%)

Query: 20  SSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCAL 79
           SSSS P  SP EV         P + T +T V    +S  +     +     E      +
Sbjct: 450 SSSSWPIHSP-EVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDV 508

Query: 80  EIFNTVSE-------------------QKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
             FN+V +                   ++G   N  TY+T++D L++  K +    +L +
Sbjct: 509 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 568

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           M    C+ +   +  ++         E  + +  ++       P     +T ++   +  
Sbjct: 569 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD-AGCLPDAVTYNTLIDGFFKRQ 627

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           ++  A   L+         P+   +  L    C+ G  + A E+L  M  ++   PN IT
Sbjct: 628 RLREAVGLLR-EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMA-ARGCAPNAIT 685

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           YS+++DGLCK GR  EA+  FE+M   + + P  + Y+ LIDG C+ G++D A + +E M
Sbjct: 686 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G  P+V  ++ L+NG C  G++    E+F  M     K D   Y  +IN +C  G  
Sbjct: 746 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEF 805

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
             A  LL+EMK  G   + VT  I++  LC   +I+EA+     +  D    ++ SY  +
Sbjct: 806 SAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTL 863

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +         E+A+ELLR M+  G  P       ++  L KAG  E AA  L  +   G 
Sbjct: 864 ITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGH 923

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            P+  ++ +++  + + ++L  A +  +E++ K
Sbjct: 924 SPDLRTYTIMISGLSKAKQLPLACDYFEEMLRK 956



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 194/412 (47%), Gaps = 45/412 (10%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q GF     TY+T++D L R  + +    +L +M    C  +   +  L+         +
Sbjct: 29  QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAK 88

Query: 148 RVLEMFHK----------------IHPITREK------------------PSLKAISTCL 173
               +  +                I  + +E                   P ++  +  L
Sbjct: 89  EAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLL 148

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
           + L E  +VD A  F +     +   P+   +N ++    K G LE+A  VL+ + +S  
Sbjct: 149 HALCELGRVDEAWFFFQ-QVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAES-F 206

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           S P + T++  +DGL K G    A E F+ M  +  + P+ +TY+ LIDG C+ GK+D A
Sbjct: 207 SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM-PQTGVSPNTVTYDALIDGLCKAGKLDIA 265

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
              +  +++      +F +++L++G C+  +L+EA ++   M      P+ + + +L+N 
Sbjct: 266 ---LGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCV---PNVVCFNSLMNG 319

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYL 412
            C+A RVDEA EL   MKE GC AD++T+NI+L GLC+  +I EA   +E +   +G   
Sbjct: 320 LCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSP 379

Query: 413 NKASYRIVLNFSCQKGELEKAIELL-RLMLCRGFLPHYATSNELLVRLCKAG 463
           N  ++  ++   C  G + +A E+  R++   G  P+  T   LL  LCKAG
Sbjct: 380 NVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAG 431



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 159/305 (52%), Gaps = 9/305 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEE 263
           +N+LI   CK G +  AF   +  K  Q  + P ++TYST+IDGLC++    +  +L EE
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFR--KAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  +    P+A+TYN L++     G+   A  ++E M  NGC P +  +  ++ G CKEG
Sbjct: 62  MAGRG-CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +++ A  V DEM +    PD   +T L++  C  GRVDEA    +++   G   D VT+N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKA-SYRIVLNFSCQKGELEKAIELLRLMLC 442
            ++ GL + G++E A GM+ +L  +        ++ I ++   + G L  A E    M  
Sbjct: 181 TMVDGLYKAGRLEAA-GMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G  P+  T + L+  LCKAG  +   IAL  L +   +    +++ L+  +C+  +L  
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLD---IALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEE 296

Query: 503 AFELL 507
           A +LL
Sbjct: 297 AIQLL 301



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 1/270 (0%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++TY+ LI+GLCK GR  +A   F + + +    P  +TY+ +IDG CR  +VD+  K++
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAI-QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLL 59

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           E M   GC PN   Y TL+N    +G+ +EA  + + M      P+ I +  +I   C+ 
Sbjct: 60  EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G ++ A  ++ EM +RG   D+    ++L  LC  G+++EA    +++   G   +  +Y
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++   + G LE A  +L+L+      P   T    +  L KAG    A      + +
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELL 507
            G  P + ++  L++ +C+  KL  A  LL
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLL 269



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 183/442 (41%), Gaps = 78/442 (17%)

Query: 90   GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
            G   N  TY+T++D L +  + E    VLRQM    C      +  L+  F      +R+
Sbjct: 573  GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK---RQRL 629

Query: 150  LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             E    +  +      PS+   +T  + L  S + D A   L Y        PN   ++ 
Sbjct: 630  REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR-GCAPNAITYSS 688

Query: 208  LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            ++   CK G +  A    ++M + ++  P++I YS LIDGLCK GR  EA E  E M+  
Sbjct: 689  IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748

Query: 268  DQILPDALTYNVLIDGFCRGGKVDR----------------------------------- 292
             +I PD +T+++LI+G C  G++D                                    
Sbjct: 749  GRI-PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSA 807

Query: 293  AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF--------DEMK-NFLL--- 340
            A  ++E MK +G   N   +  ++   C   ++ EA   F        DE+  N L+   
Sbjct: 808  AYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSL 867

Query: 341  ---------------------KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
                                  PD   Y T+++   +AG  + A +LL+EM+ RG   D+
Sbjct: 868  VASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDL 927

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             T+ I++ GL +  ++  A    E++    +  +   Y  +++  C+  +++ A +LLR 
Sbjct: 928  RTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR- 986

Query: 440  MLCRGFLPHYATSNELLVRLCK 461
                G  P     + ++  LCK
Sbjct: 987  --SSGIEPTITMYSTMVDSLCK 1006



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 130/240 (54%), Gaps = 8/240 (3%)

Query: 275 LTYNVLIDGFCRGGKVDRA----KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +TYNVLI+G C+ G+V  A    +K ++F    G  P V  Y+T+++G C++ ++ +  +
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQF----GFRPTVVTYSTVIDGLCRDNEVDKGCK 57

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + +EM      P+ + Y TL+N     GR  EA  LL+ M   GC  +++TF +I+ GLC
Sbjct: 58  LLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLC 117

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           +EG+IE A  +++++   G   +   + ++L+  C+ G +++A    + +L  GF P   
Sbjct: 118 KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N ++  L KAG  E A + L  L E    P   ++ + V+ + +   L  A+E  D +
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 167/385 (43%), Gaps = 72/385 (18%)

Query: 88   QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            + GF+ +  TY T+   L R  +F+    +L  M    C  +   + +++          
Sbjct: 641  EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 700

Query: 148  RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--------- 198
              L  F K+       P + A S  ++ L ++ ++D A  FL+   +  R+         
Sbjct: 701  EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSIL 760

Query: 199  -------------------------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
                                     K +   +N +I  +C +G   +A+ +L+EMK   +
Sbjct: 761  INGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGI 820

Query: 234  SYPNLITYSTLIDGLCKNGRFREAI---------------------------------EL 260
            +  N +T+  +I  LC N R  EA+                                 EL
Sbjct: 821  A-KNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALEL 879

Query: 261  FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
               MV+ D   PDA  Y  ++DG  + G  + A K+++ M++ G +P++  YT +++G  
Sbjct: 880  LRAMVA-DGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLS 938

Query: 321  KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            K  +L  A + F+EM    LKPD I Y++LI+ FC+A +VD+A +LL   +  G +  I 
Sbjct: 939  KAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTIT 995

Query: 381  TFNIILGGLCREGKIEEALGMLEKL 405
             ++ ++  LC+    ++AL ++ ++
Sbjct: 996  MYSTMVDSLCKNRGTDKALEVIREM 1020



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 16/297 (5%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
             LE+F  ++E +G   +   Y  +++      +F A  A+L +M     K H GI  N +
Sbjct: 773  GLELFCGMAE-RGCKADIYAYNAMINAYCLKGEFSAAYALLEEM-----KTH-GIAKNTV 825

Query: 138  KH---FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
             H         ++R+ E     H I  +     + +T +  L+ S + + A   L+    
Sbjct: 826  THGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVA 885

Query: 195  HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
                 P+ C +  ++    K G+ E A ++L+EM+    S P+L TY+ +I GL K  + 
Sbjct: 886  DGG-SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS-PDLRTYTIMISGLSKAKQL 943

Query: 255  REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
              A + FEEM+ K+ + PDA+ Y+ LID FC+  KVD A K++   +++G  P +  Y+T
Sbjct: 944  PLACDYFEEMLRKN-LKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYST 999

Query: 315  LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
            +++  CK     +A EV  EMK+   +P    +T+L   +   GRVDEA++L+ +++
Sbjct: 1000 MVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 72/133 (54%)

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VT+N+++ GLC+ G++ +A     K    G      +Y  V++  C+  E++K  +LL 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  RG  P+  T N L+  L   G A++A   L  +   G  PE  ++ L+++ +C+  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 499 KLLFAFELLDELV 511
           ++  AF ++DE+V
Sbjct: 121 EIEAAFRVVDEMV 133


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 213/428 (49%), Gaps = 13/428 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF  N  TY  +L  L    +     A+  +M           +  L+  F      +
Sbjct: 78  KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLD 137

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
             L++F     + R   P +   +  +N   +++++D AQ  L+       L P+   +N
Sbjct: 138 EALKIFD--GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-SLVPDVVTYN 194

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN-GRFREAIELFEEMV 265
            L+   CK G ++ A  ++ +   S    PN+ITYSTLI GLC+   R   A +L E+MV
Sbjct: 195 SLVNGLCKNGRVDEARMLIVDKGFS----PNVITYSTLISGLCRELRRLESARQLLEKMV 250

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
             +   PD ++YN LI G  R   V  A K+   +   G  P V  Y  L++G  KE ++
Sbjct: 251 L-NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA E+F  +    L+PD I YT  I+  C+AGRV++AL +LK+M E+GC  D+V+ N +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC+E +++EA  +L  +   G   N  S+  ++   C+ G+ +KA+   + ML RG 
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429

Query: 446 LPHYATSNELLVRLCKA---GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            P   T N L+  LCKA   G  ++A      ++E G  P+  +++ L++ + +  KL  
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 489

Query: 503 AFELLDEL 510
           A  LL  +
Sbjct: 490 ARRLLGAM 497



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 214/425 (50%), Gaps = 45/425 (10%)

Query: 88  QKGFNHNNATYATILDKLAR-YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
            KGF+ N  TY+T++  L R  ++ E+   +L +M    CK                   
Sbjct: 215 DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCK------------------- 255

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
             ++     IH + RE+     +S  L L        L Q +          +P    +N
Sbjct: 256 PDIVSYNALIHGLAREQ----GVSEALKLFGSV----LRQGY----------EPEVPTYN 297

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ILI    K   +  AFE+   + K  +  P+ ITY+  IDGLCK GR  +A+ + ++M  
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLE-PDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + PD +++N +I+G C+  +VD A+ ++  M+  GC+PN  ++ TL+ G C+ GK +
Sbjct: 357 KGCV-PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 415

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRA---GRVDEALELLKEMKERGCKADIVTFN 383
           +A   F EM    +KP  + Y  L++  C+A   GR+ EA+ L   M E+G   D+VT++
Sbjct: 416 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 475

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GL + GK+++A  +L  +   G   N  +Y  +++  C   ++++A+EL   M+ +
Sbjct: 476 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEK 535

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLF 502
           G +P   T   ++  LCK  M  D A+ALF G +E G  P S  +  L++ +C   ++  
Sbjct: 536 GCVPDTITYGTIISALCKQEMV-DKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDE 594

Query: 503 AFELL 507
           A +LL
Sbjct: 595 ALKLL 599



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 226/436 (51%), Gaps = 14/436 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL+IF+  + ++GF  +  TY  +++   +  K +    +L++M  E+       + +L+
Sbjct: 139 ALKIFDG-AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLV 197

Query: 138 KHF-SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI-ESNQVDLAQNFLKYSNQH 195
                N  + E  + +  K        P++   ST ++ L  E  +++ A+  L+    +
Sbjct: 198 NGLCKNGRVDEARMLIVDKGF-----SPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              KP+   +N LI    +   +  A ++   + + Q   P + TY+ LIDGL K  R  
Sbjct: 253 -GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLR-QGYEPEVPTYNILIDGLLKEDRVN 310

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA ELF  +V K  + PDA+TY V IDG C+ G+V+ A  +++ M   GC P+V ++  +
Sbjct: 311 EAFELFSGLV-KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CKE ++ EA+ +   M+     P+ I + TLI   CRAG+  +A+   KEM +RG 
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429

Query: 376 KADIVTFNIILGGLCR---EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           K  +VT+NI++ GLC+   EG+I+EA+ + + +   G   +  +Y  +++   + G+L+ 
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 489

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  LL  M  +G +P+  T N L+  LC     ++A      +VE G  P++ ++  ++ 
Sbjct: 490 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIIS 549

Query: 493 LICRGRKLLFAFELLD 508
            +C+   +  A  L D
Sbjct: 550 ALCKQEMVDKALALFD 565



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 14/354 (3%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           +   +S+ A I  +  E+    AL++F +V  Q G+     TY  ++D L +  +     
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNEAF 313

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTC 172
            +   +     +     +   +         E  L M   +     EK   P + + +  
Sbjct: 314 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD----EKGCVPDVVSHNAV 369

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           +N L +  +VD A+  L    +     PN   FN LI   C+ G  + A    KEM K  
Sbjct: 370 INGLCKEKRVDEAEVLLS-GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428

Query: 233 MSYPNLITYSTLIDGLCK---NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           +  P ++TY+ L+DGLCK    GR +EAI LF+ M+ K ++ PD +TY+ LIDG  + GK
Sbjct: 429 VK-PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV-PDVVTYSALIDGLGKAGK 486

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +D A++++  M+  GC PNV+ Y +L++G C   K+ EA E+F  M      PDTI Y T
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           +I+  C+   VD+AL L     E G       +  ++ GLC   +++EAL +L+
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 161/312 (51%), Gaps = 41/312 (13%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+  T   L+  L K+G+  +A    E+++ K   L D  T+N+ I G CR  ++  A+ 
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG--LCDISTFNIYISGLCRASRIGDAQT 71

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M+ +G  PN   Y  L++G C  G++ +A+ +++ M      PD + Y TL++ FC
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G++DEAL++     +RG   D+VT+N ++ G C+  K++EA  +L+++  + +  +  
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA------------- 462
           +Y  ++N  C+ G +++A     L++ +GF P+  T + L+  LC+              
Sbjct: 192 TYNSLVNGLCKNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 463 ------------------GMAEDAAIA----LFG-LVEMGFKPESDSWALLVELICRGRK 499
                             G+A +  ++    LFG ++  G++PE  ++ +L++ + +  +
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308

Query: 500 LLFAFELLDELV 511
           +  AFEL   LV
Sbjct: 309 VNEAFELFSGLV 320


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 177/334 (52%), Gaps = 3/334 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +   +T +N L +  +   A   LK   +    +PN   ++ LI   C+   +  A 
Sbjct: 195 QPDVYTYNTIINGLCKIGETAAAAGLLK-KMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++   MK   +S P++ TY++LI GLCK  R++EA  L  EM S + I+PD +T+NVL+D
Sbjct: 254 DIFSYMKAKGIS-PDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN-IMPDIVTFNVLVD 311

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            FC+ GKV  A  +++ M   G  PNV  Y++LM G+     + EA+++F  M     KP
Sbjct: 312 TFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKP 371

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +   Y  LIN +C+A R+DEA++L  EM  +G   + V++N ++ G C+ GK+ EA  + 
Sbjct: 372 NIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLF 431

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +  +G   +  +Y I+L+  C++G L KA  L R M      P+      L+  +CK+
Sbjct: 432 RNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKS 491

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           G  +DA      L   G +P    +  ++  +C+
Sbjct: 492 GNHKDARKLFSELFVQGLQPHVQLYTTIINGLCK 525



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 172/310 (55%), Gaps = 2/310 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN    +I +   C+   ++  F VL ++ K  +  P ++T++TLI+GLCK G F +A
Sbjct: 124 LSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQ-PTIVTFTTLINGLCKVGEFAQA 182

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +ELF++MV+K    PD  TYN +I+G C+ G+   A  +++ M+  GC PN+  Y+TL++
Sbjct: 183 VELFDDMVAKG-CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 241

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C++  + EA ++F  MK   + PD   YT+LI   C+  R  EA  LL EM       
Sbjct: 242 SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMP 301

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DIVTFN+++   C+EGK+ EALG+L+ +   G+  N  +Y  ++       ++ +A +L 
Sbjct: 302 DIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF 361

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            +M+ +G  P+  + N L+   CKA   ++A      ++  G  P + S+  L+   C+ 
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421

Query: 498 RKLLFAFELL 507
            KL  A +L 
Sbjct: 422 GKLREAQDLF 431



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 188/385 (48%), Gaps = 38/385 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++  +S  +N   +  +VDL  + L    + L L+P    F  LI   CK G    A E
Sbjct: 126 PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIK-LGLQPTIVTFTTLINGLCKVGEFAQAVE 184

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  +M  ++   P++ TY+T+I+GLCK G    A  L ++M  +    P+ +TY+ LID 
Sbjct: 185 LFDDMV-AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM-EEAGCQPNMVTYSTLIDS 242

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            CR   V+ A  I  +MK  G +P++F YT+L+ G CK  + +EA  + +EM +  + PD
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKE------------------------------- 372
            + +  L++ FC+ G+V EAL +LK M E                               
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362

Query: 373 ----RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
               +GCK +I ++NI++ G C+  +I+EA+ +  ++ + G+  N  SY  +++  CQ G
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLG 422

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +L +A +L R M   G LP   T + LL   CK G    A      +     KP    + 
Sbjct: 423 KLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYT 482

Query: 489 LLVELICRGRKLLFAFELLDELVIK 513
           +LV  +C+      A +L  EL ++
Sbjct: 483 ILVHAMCKSGNHKDARKLFSELFVQ 507



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 218/425 (51%), Gaps = 10/425 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F+ +   KG   +  TY TI++ L +  +  A   +L++M    C+ +   +  L+
Sbjct: 182 AVELFDDMVA-KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLI 240

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  L    L++F  +       P +   ++ +  L + ++   A   L      L 
Sbjct: 241 DSLCRDRLVNEALDIFSYMKA-KGISPDIFTYTSLIQGLCKFSRWKEASALLN-EMTSLN 298

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   FN+L+   CK G +  A  VLK M +  +  PN++TYS+L+ G        EA
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVE-PNVVTYSSLMYGYSLWTDVVEA 357

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF  M++K    P+  +YN+LI+G+C+  ++D A ++   M + G  PN  +Y TL++
Sbjct: 358 RKLFHVMITKG-CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIH 416

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC+ GKL+EA+++F  M      PD   Y+ L++ FC+ G + +A  L + M+    K 
Sbjct: 417 GFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKP 476

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++V + I++  +C+ G  ++A  +  +L+  G+  +   Y  ++N  C++G L++A+E  
Sbjct: 477 NLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAF 536

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICR 496
           R M   G  P   + N +++R       E  A+ L G + + GF   +D    L E +C+
Sbjct: 537 RNMEADGCPPDEISYN-VIIRGLLQHKDESRALLLVGEMRDRGFI--ADVRPCLSE-VCQ 592

Query: 497 GRKLL 501
           G+K++
Sbjct: 593 GKKVM 597



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 131/256 (51%), Gaps = 2/256 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV-DRAKKIMEFMKNNGCNPNVFNYTT 314
           +A+  F  M+ + + LP  + +  L+    + G+  D    + + M+  G +PN++  + 
Sbjct: 75  DALASFNHMLHR-KPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            MN FC+  ++     V  ++    L+P  + +TTLIN  C+ G   +A+EL  +M  +G
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           C+ D+ T+N I+ GLC+ G+   A G+L+K+   G   N  +Y  +++  C+   + +A+
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++   M  +G  P   T   L+  LCK    ++A+  L  +  +   P+  ++ +LV+  
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 313

Query: 495 CRGRKLLFAFELLDEL 510
           C+  K+  A  +L  +
Sbjct: 314 CKEGKVSEALGVLKTM 329



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 1/175 (0%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV-DEALELLKEMKERGCKADIVTFN 383
           + +A   F+ M +    P  I +  L++   + G+  D  + L K+M+  G   +I T +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I +   C+  +++    +L K+   G+     ++  ++N  C+ GE  +A+EL   M+ +
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           G  P   T N ++  LCK G    AA  L  + E G +P   +++ L++ +CR R
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDR 247


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 37/351 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN   +N +I   CK G    A +VL+EM  SQ   P+ + Y+TLI G  K G  R A
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMM-SQKIIPDNVVYTTLIHGFFKLGHVRTA 382

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            + F+EM+SK +I PD +TY  LI GF +GGKV   + +   M + G  P+   YTTL++
Sbjct: 383 NKWFDEMLSK-KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLID 441

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            +CK G++  A  + +EM    + P+ + Y  LI+  C+ G +D A ELL EM+++G + 
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++  +N ++ G+C+ G IE+A+ +++++   GI  +  +Y  V++  C+ G+++KA +LL
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-------------------- 477
           + ML RG  P   T N L+   C  GM ED    L  ++E                    
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 478 ---------------MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                           G  P+S+++ +L++  C+ R L  A+ L  E++ K
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 239/500 (47%), Gaps = 44/500 (8%)

Query: 52  DARKR-SRFISHGAAISLIKCEK------EPQCALEIFNTVSEQKGFNHNNATYATILDK 104
           +ARK   + +S+G  +++  C             +E+   V  + G + N  +Y  I+  
Sbjct: 208 EARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYS 267

Query: 105 LARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKP 164
           L R  K +    +L QM + +       +  ++  + +    ++ L++   +  I   KP
Sbjct: 268 LCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ-IKGLKP 326

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           +    ++ + LL +  +   A+  L+      ++ P+  ++  LI    K G + +A + 
Sbjct: 327 NRYTYNSIILLLCKIGKSFEAEKVLREMMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKW 385

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK----DQIL--------- 271
             EM   ++S P+ ITY+TLI G  + G+  E   LF EM+S+    D++          
Sbjct: 386 FDEMLSKKIS-PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 272 ---------------------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
                                P+ +TY  LIDG C+ G++D A ++++ M+  G   NV 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y +++NG CK G +++A ++  EM+   + PD I YTT+I+ +CR G +D+A +LL+EM
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            +RG +  +VTFN+++ G C  G +E+   +L  +   GI  +  +Y  ++   C +  +
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
               ++ + M  +G  P   T N L+   CKA   ++A      ++E G+ P   S+  L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 491 VELICRGRKLLFAFELLDEL 510
           ++   + RK   A EL +E+
Sbjct: 685 IKRFYKKRKFXEARELFEEM 704



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 172/311 (55%), Gaps = 2/311 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT  +NI+I   C+ G ++ A  +L +M   + S P++++YST+IDG C  G  ++A++L
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMD-FRSSTPDVVSYSTVIDGYCHLGELKKALKL 315

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M  K  + P+  TYN +I   C+ GK   A+K++  M +    P+   YTTL++GF 
Sbjct: 316 MDDMQIKG-LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFF 374

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G ++ A + FDEM +  + PD I YTTLI  F + G+V E   L  EM  RG K D V
Sbjct: 375 KLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEV 434

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+  ++   C+ G++  A  +  ++   G+  N  +Y  +++  C+ GEL+ A ELL  M
Sbjct: 435 TYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM 494

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +    N ++  +CKAG  E A   +  +   G  P++ ++  +++  CR   +
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554

Query: 501 LFAFELLDELV 511
             A +LL E++
Sbjct: 555 DKAHKLLQEML 565



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 172/392 (43%), Gaps = 37/392 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  TY +I+  L +  K    + VLR+M  +       ++  L+  F     H R
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG-HVR 380

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
               +       +  P     +T +    +  +V   QN L +      LKP+   +  L
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN-LFHEMISRGLKPDEVTYTTL 439

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I  +CK G + +AF +  EM +  M+ PN++TY  LIDGLCK+G    A EL +EM  K 
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMT-PNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 269 ----------------------------------QILPDALTYNVLIDGFCRGGKVDRAK 294
                                              I PDA+TY  +ID +CR G +D+A 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           K+++ M + G  P V  +  LMNGFC  G L++   +   M    + PD I Y TL+   
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C    ++   ++ K M+ +G   D  T+NI++ G C+   ++EA  + +++   G     
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            SY  ++    +K +  +A EL   M   G +
Sbjct: 679 TSYNALIKRFYKKRKFXEARELFEEMRGHGLV 710



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 18/347 (5%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC-------SLHERV 149
           TY T++    +  K      +  +M     K  E  +  L+  +          SLH  +
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           ++M           P++      ++ L +  ++D A   L    +   L+ N CI+N ++
Sbjct: 460 VQM--------GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK-GLQLNVCIYNSMV 510

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G +E A +++KEM+ + +  P+ ITY+T+ID  C+ G   +A +L +EM+ +  
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGID-PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG- 568

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + P  +T+NVL++GFC  G ++   +++ +M   G  P+   Y TLM   C    +    
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +++  M+N  + PD+  Y  LI   C+A  + EA  L KEM E+G    + ++N ++   
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++ K  EA  + E++   G+  +   Y   ++   ++G++E  + L
Sbjct: 689 YKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 178/371 (47%), Gaps = 24/371 (6%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLK------------------ 199
            R +PSL+A    +++ + SN + LA   +   + N  L +                   
Sbjct: 128 VRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWG 187

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   F+I  +   + G L  A ++L ++    +SY  ++T  +    L +     E IE
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKL----LSYGLVVTVDSCNAFLSRIANNSEGIE 243

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  ++  +  I  +  +YN++I   CR GKV  A +++  M      P+V +Y+T+++G+
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C  G+L++A ++ D+M+   LKP+   Y ++I   C+ G+  EA ++L+EM  +    D 
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +  ++ G  + G +  A    +++    I  +  +Y  ++    Q G++ +   L   
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T   L+   CKAG   +A      +V+MG  P   ++  L++ +C+  +
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 500 LLFAFELLDEL 510
           L  A ELLDE+
Sbjct: 484 LDTANELLDEM 494



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 4/286 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  ++D L ++ + +  + +L +M  +  + +  I+ +++         E
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +++  ++  +    P     +T ++       +D A   L+       L+P    FN+
Sbjct: 521 QAIKLMKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR-GLQPTVVTFNV 578

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G LE    +L  M +  +  P+ ITY+TL+   C         ++++ M ++
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIV-PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ 637

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD+ TYN+LI G C+   +  A  + + M   G  P V +Y  L+  F K+ K  E
Sbjct: 638 G-VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXE 696

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           A+E+F+EM+   L  D   Y   ++     G V+  L L  E  E+
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 10/212 (4%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC---FCRAGRVDEA 363
           PN   +        + G L EA+++ D++ ++ L        T+ +C     R     E 
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGL------VVTVDSCNAFLSRIANNSEG 241

Query: 364 LEL-LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           +E+ +K   E G   +  ++NII+  LCR GK++EA  +L ++ +     +  SY  V++
Sbjct: 242 IEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVID 301

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C  GEL+KA++L+  M  +G  P+  T N +++ LCK G + +A   L  ++     P
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           ++  +  L+    +   +  A +  DE++ K+
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 200/435 (45%), Gaps = 8/435 (1%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           +  F     Q  +NH   +Y  +L+ LA+  + + V      M    C  +   +  L++
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHL 196
                   E    +F  +       P++ + S  +  L    +VD A   L       H 
Sbjct: 61  SLCQAQRFEEARSVFRGM-AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH- 118

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
             +PN   +  L+   CK G L+ A ++   M       P+ + Y+ LIDG  K G   E
Sbjct: 119 --QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP-PDGVVYNVLIDGFSKKGDMGE 175

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  LFEEM+ K  I P   TYN L+ GF R G+  R + + + M   GC PN+F +  L+
Sbjct: 176 AYRLFEEMLEKGCI-PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +GFCK G + EA  +F EM++    PD + Y TLI   C  G+  EA  LL+EM   G  
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            DIV++NI++ G  + G ++ A+ +  ++   G+  +  SY  +++  C+ G++  A  +
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVV 354

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + M+  G  P  A    L++ LC+     ++      +V+    P    + LL+  +C+
Sbjct: 355 FKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCK 414

Query: 497 GRKLLFAFELLDELV 511
            ++     E+  EL 
Sbjct: 415 AKRSDDVCEIFHELT 429



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 160/316 (50%), Gaps = 2/316 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PNT  +  L++  C+    E A  V + M  +Q   PN+ +YS LI GLC+  +  EA E
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMA-AQGCSPNVFSYSILIAGLCRGQKVDEAAE 108

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM+      P+ +TY  L+ G C+ GK+  A  +   M   GC P+   Y  L++GF
Sbjct: 109 LLNEMIDGGH-QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF 167

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K+G + EA  +F+EM      P    Y +L++ F R G       L K+M  +GC  +I
Sbjct: 168 SKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNI 227

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TFN +L G C+ G + EA  +  ++   G   +  SY  ++   C KG+  +A  LLR 
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLRE 287

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G  P   + N L+    K+G  + A    + + + G +P++ S++ +++ +CR  K
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347

Query: 500 LLFAFELLDELVIKES 515
           +  AF +  +++   S
Sbjct: 348 VGAAFVVFKDMIANGS 363



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 168/350 (48%), Gaps = 17/350 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNL 136
           A E+ N + +  G   N  TY ++L  L +  K  EAVD +  +M Y  C     ++  L
Sbjct: 106 AAELLNEMID-GGHQPNVVTYGSLLSGLCKMGKLKEAVD-LFSRMVYRGCPPDGVVYNVL 163

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           +  FS          +F ++     EK   P++   ++ L+      +    Q+  K   
Sbjct: 164 IDGFSKKGDMGEAYRLFEEM----LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK--- 216

Query: 194 QHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             LR    PN   FN L+   CK G +  A  +  EM+ S    P++++Y+TLI G+C  
Sbjct: 217 DMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR-SLGCPPDVVSYNTLIRGMCSK 275

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+  EA  L  EM+ +  + PD ++YN+LIDG+ + G +D A K+   +  +G  P+ F+
Sbjct: 276 GKPHEAQRLLREMI-RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS 334

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+T+++  C+ GK+  A  VF +M      PD      L+   CR  R+ E+ EL + M 
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           +  C   I  +N+++  LC+  + ++   +  +L   G   +    +++L
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 13/364 (3%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K D   E  +  +D   +   +++G+ +S +    + + A+++F+ +   +G   +   Y
Sbjct: 102 KVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV-YRGCPPDGVVY 160

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
             ++D  ++         +  +M  + C      + +L+  FS      RV  +F  +  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM-- 218

Query: 159 ITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
               +  +  I T  NLL       + V+  + FL+   + L   P+   +N LI+  C 
Sbjct: 219 --LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM--RSLGCPPDVVSYNTLIRGMCS 274

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G    A  +L+EM +S +  P++++Y+ LIDG  K+G    AI+LF E + K  + PDA
Sbjct: 275 KGKPHEAQRLLREMIRSGVG-PDIVSYNILIDGYSKSGALDHAIKLFYE-IPKSGLEPDA 332

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            +Y+ +ID  CR GKV  A  + + M  NG  P+      L+ G C+  +L E+ E+F  
Sbjct: 333 FSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQA 392

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M  F   P    Y  L+   C+A R D+  E+  E+ ERG   D+    +IL  L R   
Sbjct: 393 MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452

Query: 395 IEEA 398
            + A
Sbjct: 453 KDAA 456



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 80/170 (47%)

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ Y  L+    ++GR D       +M   GC  +  T+  +L  LC+  + EEA  +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G   N  SY I++   C+  ++++A ELL  M+  G  P+  T   LL  LCK G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++A      +V  G  P+   + +L++   +   +  A+ L +E++ K
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 231/463 (49%), Gaps = 37/463 (7%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           +   IS+   I  +  ++    A E+F  +  Q G   +  +Y T++       K+E   
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEMKAQ-GIMPDVISYTTLIHGFCLSGKWEKAK 513

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSL-------HERVLEMFHKIHPITREKPSLKA 168
                     C F+E + + +    +  S+         +V+E  +K+  +  ++  +  
Sbjct: 514 ----------CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA-NKLLEVVIQRGCILD 562

Query: 169 ISTCLNL---LIESNQVDLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           + TC  L   L   +++  A Q FLK   Q L   PN      L+K  C+ G ++ A E+
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKM--QKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620

Query: 225 LKEMKKSQMSY-----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            K M      Y     PN I+YS +IDGLCK GR  EA ELF+EM +   ++PD ++Y  
Sbjct: 621 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG-VIPDVISYTS 679

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI GFCR GK   AK +   M + G  P+V  ++ L++  CKEGK+ EA E+ + M    
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             P+T+ YTTL+   C   R+ EA +L  +M++ GC  D+VT+  ++ GLC+ G I+ AL
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799

Query: 400 GMLEKLWYD-GIY-----LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            + +K+  D G Y      +  SY I+++  C+ G  ++A EL + M   G +P+  +  
Sbjct: 800 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 859

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            L+   C++G  EDA      +V+ G +  + ++++++   C+
Sbjct: 860 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCK 902



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 226/432 (52%), Gaps = 26/432 (6%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           +Y+ I+D L + ++ +    +  +M  +        +  L+  F      E+   +F+++
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI-----LIKH 211
             +  + P +   S  +++L +  +V  A   L+   Q        CI ++     L+K 
Sbjct: 520 LDVGIQ-PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR------GCILDVVTCTTLVKG 572

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C +  +  A ++  +M+K     PN++T +TL+ GLC++G  + A+EL + M+S     
Sbjct: 573 LCMKHRISKATQLFLKMQKLG-CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 631

Query: 272 -----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                P+A++Y+++IDG C+ G+ D A+++ + MK  G  P+V +YT+L++GFC+ GK +
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +AK +F+EM +  ++PD   ++ LI+  C+ G+V EA ELL+ M +RGC  + VT+  ++
Sbjct: 692 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC---- 442
            GLC   +I EA  +  K+   G   +  +Y  ++   CQ G ++ A+EL + ML     
Sbjct: 752 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811

Query: 443 --RGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRK 499
               F P   + + ++  LCK G  ED A  LF  +  +G  P   S+  L+   CR  K
Sbjct: 812 YGTNFKPDVISYSIIIDGLCKHG-REDEARELFKEMKALGVIPNVISYTSLIHGFCRSGK 870

Query: 500 LLFAFELLDELV 511
           L  A  L +E+V
Sbjct: 871 LEDAKHLFNEMV 882



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 204/390 (52%), Gaps = 14/390 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  T + ++D L +  K    + +L  +    C         L+K         + 
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA----QNFLKYSNQH-LRLKPNTCI 204
            ++F K+  +    P++   +T +  L +S  + +A    +N L  ++ + +  KPN   
Sbjct: 583 TQLFLKMQKLGC-MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 641

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++I+I   CK G  + A E+ KEMK   +  P++I+Y++LI G C++G++++A  LF EM
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGV-IPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V    + PD  T++VLID  C+ GKV  A +++E M   GC PN   YTTL+ G C   +
Sbjct: 701 VDIG-VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 759

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM----KERGC--KAD 378
           + EA ++F +M+     PD + Y TL+   C+ G +  ALEL K+M     + G   K D
Sbjct: 760 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 819

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +++++II+ GLC+ G+ +EA  + +++   G+  N  SY  +++  C+ G+LE A  L  
Sbjct: 820 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 879

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            M+ +G   +  T + ++   CK G  + A
Sbjct: 880 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 230/485 (47%), Gaps = 66/485 (13%)

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           V   +G   +  TY+T++  L    +      +   M    C+     +  LMK      
Sbjct: 260 VMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTG 319

Query: 145 -------LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  LH+ +L    + + I   +P +   S  +++L +  +V  A   L+   Q   
Sbjct: 320 KINIALHLHQEMLNDTSQ-YGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQR-- 376

Query: 198 LKPNTCIFNI-----LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                CI +I     LIK  C    +  A  +   M+K     P+ ITY TL+ GLC+ G
Sbjct: 377 ----GCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG-CRPDAITYGTLMKGLCQTG 431

Query: 253 RFREAIELFEEMVSKD-----QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
               A++L +EM++       +  P  ++Y+++IDG C+  + D A+++ E MK  G  P
Sbjct: 432 NINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMP 491

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V +YTTL++GFC  GK ++AK +F+EM +  ++PD    + LI+  C+ G+V EA +LL
Sbjct: 492 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 551

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG------------------ 409
           + + +RGC  D+VT   ++ GLC + +I +A  +  K+   G                  
Sbjct: 552 EVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 611

Query: 410 ----IYL-------------------NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
               I L                   N  SY I+++  C+ G  ++A EL + M   G +
Sbjct: 612 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 671

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   +   L+   C++G  +DA      +V++G +P+  ++++L++++C+  K++ A EL
Sbjct: 672 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 731

Query: 507 LDELV 511
           L+ ++
Sbjct: 732 LEVMI 736



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 184/350 (52%), Gaps = 24/350 (6%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI-----LIKHHCKRGT 217
           +P +   S  +++L +  +V  A   L+   Q        CI +I     LIK  C    
Sbjct: 51  RPDVTTSSMLIDILCKEGKVIEANELLEVMIQR------GCILDIVTYSTLIKGLCMEHR 104

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-----QILP 272
           +  A  +   M+K     P+ ITY TL+ GLC+ G    A++L +EM++       +  P
Sbjct: 105 ISEATWLFMSMQKLG-CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 163

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
             ++Y+++IDG C+  + D A+++ + MK  G  P+V +YT+L++GFC  GK ++AK +F
Sbjct: 164 TLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLF 223

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  ++PD      LI+ FC+ G+V EA ELL+ M  RGC  DIVT++ ++ GLC +
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMK 283

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML-------CRGF 445
            +I EA  +   +   G   +  +Y  ++   CQ G++  A+ L + ML        +  
Sbjct: 284 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI 343

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            P   TS+ L+  LCK G   +A   L  +++ G   +  +++ L++ +C
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 393



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 169/328 (51%), Gaps = 15/328 (4%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ-----MSY---PNLITYSTLIDGLC 249
           L P++  FNILI   C    +      +  + +       ++Y   P++ T S LID LC
Sbjct: 6   LFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILC 65

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K G+  EA EL E M+ +  IL D +TY+ LI G C   ++  A  +   M+  GC P+ 
Sbjct: 66  KEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKN------FLLKPDTIGYTTLINCFCRAGRVDEA 363
             Y TLM G C+ G +  A ++  EM N         KP  I Y+ +I+  C+  R DEA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            EL KEMK +G   D++++  ++ G C  GK E+A  +  ++   GI  +  +  ++++ 
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C++G++ +A ELL +M+ RG +    T + L+  LC      +A      + ++G +P+
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 304

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
           + ++  L++ +C+  K+  A  L  E++
Sbjct: 305 AIAYGTLMKGLCQTGKINIALHLHQEML 332



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 133/210 (63%), Gaps = 8/210 (3%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + ++P+   F++LI   CK G +  A E+L+ M + +   PN +TY+TL+ GLC N R  
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ-RGCIPNTVTYTTLVKGLCMNDRIS 761

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA----KKIMEFMKNNGCN--PNV 309
           EA +LF +M  K   LPD +TY  L+ G C+ G +  A    KK++      G N  P+V
Sbjct: 762 EATQLFMKM-QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
            +Y+ +++G CK G+  EA+E+F EMK   + P+ I YT+LI+ FCR+G++++A  L  E
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEAL 399
           M ++G + + VT+++++ G C+EG+I++AL
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 153/276 (55%), Gaps = 8/276 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  +Y+ I+D L +  + +    + ++M           + +L+  F      +    +F
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 697

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +++  I  + P +   S  +++L +  +V  A   L+   Q   + PNT  +  L+K  C
Sbjct: 698 NEMVDIGVQ-PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI-PNTVTYTTLVKGLC 755

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD----- 268
               +  A ++  +M+K     P+++TY TL+ GLC+ G  + A+EL ++M+S       
Sbjct: 756 MNDRISEATQLFMKMQKLG-CLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 814

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              PD ++Y+++IDG C+ G+ D A+++ + MK  G  PNV +YT+L++GFC+ GKL++A
Sbjct: 815 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           K +F+EM +  ++ + + Y+ +I+ FC+ G++D+AL
Sbjct: 875 KHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 9/151 (5%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI---------V 420
           M+  G   D  TFNI++  LC   ++ E L  +  +   G   +  +Y I         +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++  C++G++ +A ELL +M+ RG +    T + L+  LC      +A      + ++G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELV 511
           +P++ ++  L++ +C+   +  A +L  E++
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEML 151


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 226/472 (47%), Gaps = 45/472 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATY--ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           AL+  N V ++     N+ T+  +T    L + + +      L  M +    F+  +F  
Sbjct: 39  ALKFLNWVIKKPNLEINHLTHIISTTTHILVKARMYGYAKTTLSHMLHMDVGFNN-VFGA 97

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITRE------------------KPSLKAISTCLNLLI 177
           LM+ +  C+ +  V ++   I    RE                   PS+   +  L  L+
Sbjct: 98  LMETYPFCNSNPAVFDLL--IRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLV 155

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +  +VDL  +F K    + R+ PN   FNIL+   C+RG  +SA  +L++M ++   +P 
Sbjct: 156 KDREVDLFWSFFKEMIAN-RVSPNVATFNILLNALCERGKFKSAGVLLRKMDETG-HFPT 213

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            +TY+TL++  CK GR++ A EL + M SK  I  D  TYNVLID  CR  +  +   I+
Sbjct: 214 AVTYNTLLNWYCKKGRYKAASELIDAMASKG-IAADVCTYNVLIDDLCRKSRSAKGYLIL 272

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M+ N   PN   Y TL+NG  KEGK+  A +VF+EM    L P+++ Y TLI   C  
Sbjct: 273 RRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSN 332

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G ++EAL L   M   G + + VT+  +L G+ +  +      +LE++  DG+ +   SY
Sbjct: 333 GNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISY 392

Query: 418 RIVLNFSCQKGELEKAIELLRLM--------------LCRGFL-----PHYATSNELLVR 458
             +++  C+ G LE+A++LL  M              L  GFL     P+    + L+  
Sbjct: 393 TTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYN 452

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            CK G  ++A  A   + + G   +  + ++LV   CR  +L  A   +D +
Sbjct: 453 YCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHM 504



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 204/473 (43%), Gaps = 93/473 (19%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N AT+  +L+ L    KF++   +LR+M  ET             HF     +  +L  +
Sbjct: 178 NVATFNILLNALCERGKFKSAGVLLRKMD-ET------------GHFPTAVTYNTLLNWY 224

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            K       K   KA S  ++ +                     +  + C +N+LI   C
Sbjct: 225 CK-------KGRYKAASELIDAMASKG-----------------IAADVCTYNVLIDDLC 260

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           ++      + +L+ M+K+ M YPN ITY+TLI+GL K G+   A ++FEEM S   +LP+
Sbjct: 261 RKSRSAKGYLILRRMRKN-MVYPNEITYNTLINGLVKEGKIGVATKVFEEM-SLCNLLPN 318

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV------------------------ 309
           ++TYN LI G C  G ++ A ++ + M ++G  PN                         
Sbjct: 319 SVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLE 378

Query: 310 -----------FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF---- 354
                       +YTT+++G CK G L+EA ++ D+M    + PD + ++ L+N F    
Sbjct: 379 RMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTG 438

Query: 355 ---------------CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
                          C+ G + EAL     M + G  +D  T ++++   CR G++EEA 
Sbjct: 439 LVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAE 498

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
             ++ +   G+  +  ++  +++     G+  KA  +   M   G LP   T   LL  L
Sbjct: 499 YFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGL 558

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
              G   +A I +     + +   S  +  ++ L  R   L  A  LLDE+V+
Sbjct: 559 LIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVM 611



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 154/300 (51%), Gaps = 1/300 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P++  +  LI   C++G +  A  +     +  +  PN   Y++L+DGL K G  + A+ 
Sbjct: 616 PDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALY 675

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +FE+M++ + + PDA+ +NVL+D + R GK+ +   I+  M++     N+  Y  L++G+
Sbjct: 676 MFEDMLN-EGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGY 734

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K   +    ++++EM      PD + + +LI  +C++G +D A++ L+++   G K D 
Sbjct: 735 SKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDC 794

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T N+++  LC   +I+ A  ++++L   G+  N  +Y  + N   +    ++A  +L  
Sbjct: 795 FTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHA 854

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +L  G+ P       L+  +C+ G  + A      +  +G   +  + + ++  + R RK
Sbjct: 855 LLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRK 914



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 152/311 (48%), Gaps = 1/311 (0%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           +  +N ++    + G L +A  +L EM  +    P+  TY++LI GLC+ G+   A+ L 
Sbjct: 583 STFYNTMLTLTSRSGNLSNAVALLDEMVMNNF-VPDSFTYTSLIAGLCRKGKMVPALLLS 641

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
              + K  + P+   Y  L+DG  + G    A  + E M N G  P+   +  L++ + +
Sbjct: 642 GRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSR 701

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +GK+ +  ++   M++  L  +   Y  L++ + +   +    +L  EM   G   D +T
Sbjct: 702 KGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLT 761

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ ++ G C+ G ++ A+  L K+  +G  ++  +  ++++  C++ E++ A +L++ + 
Sbjct: 762 WHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLN 821

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P+  T N L     +    ++A   L  L+E G+ P    +  L+  +CR   + 
Sbjct: 822 MLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVK 881

Query: 502 FAFELLDELVI 512
            A EL DE+ I
Sbjct: 882 GAMELQDEMKI 892



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 200/468 (42%), Gaps = 62/468 (13%)

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           V    G   N  TY  +L+ ++++ +F  V +VL +M  +  +     +  ++       
Sbjct: 344 VMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNG 403

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           L E  +++   +  ++   P +   S  +N             FLK       L PN  +
Sbjct: 404 LLEEAVQLLDDMLKVS-VSPDIVTFSVLVN------------GFLKTG-----LVPNRVL 445

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
            + LI ++CK G L+ A      M +S     +  T S L+   C+ GR  EA E F + 
Sbjct: 446 HSTLIYNYCKMGNLKEALNAYAVMNQSG-HVSDHFTSSVLVASFCRCGRLEEA-EYFVDH 503

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY------------ 312
           +S+  + P ++T++ +ID +   G   +A  + + M + G  P+ F Y            
Sbjct: 504 MSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGH 563

Query: 313 -----------------------TTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGY 347
                                   T++    + G L  A  + DEM   NF+  PD+  Y
Sbjct: 564 INEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFV--PDSFTY 621

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGC-KADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           T+LI   CR G++  AL L     E+G    +   +  ++ GL +EG  + AL M E + 
Sbjct: 622 TSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDML 681

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK-AGMA 465
            +G+  +  ++ ++L+   +KG++ K  ++L  M  R    + AT N LL    K  GMA
Sbjct: 682 NEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMA 741

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             + +    ++  GF P+  +W  L+   C+   L  A + L ++ ++
Sbjct: 742 RCSKL-YNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVE 788



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 182/377 (48%), Gaps = 14/377 (3%)

Query: 72   EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
            E   + AL +F  +  + G   +   +  +LD+ +R  K   V+ +L  M   +  F+  
Sbjct: 667  EGHSKAALYMFEDMLNE-GVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLA 725

Query: 132  IFLNLMKHFSNCSLHERVLEMFHK--IHPITREKPSLKAI--STCLNLLIESNQVDLAQN 187
             +  L+  +S      R  +++++  IH    ++ +  ++    C     +S  +D+A  
Sbjct: 726  TYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYC-----KSGSLDVAVK 780

Query: 188  FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            FL+        K +    N+L+   C+R  ++ AF+++K++    ++ PN+ TY++L +G
Sbjct: 781  FLRKITVE-GFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVT-PNVDTYNSLFNG 838

Query: 248  LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
              +   F EA  +   ++ ++   P    +  LI G CR G V  A ++ + MK  G + 
Sbjct: 839  FVRTCSFDEARCILHALL-ENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSS 897

Query: 308  NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
                 + ++ G  +  K  EA  +   M    + P    +TTL++ +C+ G V +ALEL 
Sbjct: 898  QGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELR 957

Query: 368  KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN-FSCQ 426
              M++   K D+  +N+++ GLC +G I+ A  + E++    I+ N + Y ++++ F C 
Sbjct: 958  SVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCT 1017

Query: 427  KGELEKAIELLRLMLCR 443
               + ++ +LLR +  R
Sbjct: 1018 GNYIVESEKLLRDLRTR 1034



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 158/354 (44%), Gaps = 40/354 (11%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            ++P+   FN+L+  + ++G +    ++L  M+   + + NL TY+ L+ G  K       
Sbjct: 685  VQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCF-NLATYNILLHGYSKRHGMARC 743

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME-----------FMKNN--- 303
             +L+ EM+      PD LT++ LI G+C+ G +D A K +            F  N    
Sbjct: 744  SKLYNEMIIHG-FAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVS 802

Query: 304  ---------------------GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
                                 G  PNV  Y +L NGF +     EA+ +   +      P
Sbjct: 803  KLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAP 862

Query: 343  DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
                +TTLI   CR G V  A+EL  EMK  G  +  V  + I+ GL R  K +EA  +L
Sbjct: 863  TCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRIL 922

Query: 403  EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
              +    I    A++  +++  C++G + KA+EL  +M         A  N L+  LC  
Sbjct: 923  GIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCAD 982

Query: 463  GMAEDAAIALFGLVEM-GFKPESDSWALLVE-LICRGRKLLFAFELLDELVIKE 514
            G  + AA  L+  +E     P +  + +L++  +C G  ++ + +LL +L  +E
Sbjct: 983  GDIQ-AAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRE 1035


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           F  L+          + +E+F  +  + R  +P     +T +N L +  +  LA    K 
Sbjct: 48  FTTLINGLGKVGKFAQAVELFDDM--VARGCQPDDYTYTTIINGLCKIGETALAAGLFK- 104

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +    + N   ++ LI   CK   +  A ++   MK   +S P + TY++LI GLC  
Sbjct: 105 KMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDIS-PTIFTYTSLIQGLCNF 163

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R++EA  L  EM S + I+P+ +T+NVL+D FC+ GKV  A+ +++ M   G  P+V  
Sbjct: 164 SRWKEASALLNEMTSLN-IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y +LM G+    ++ EA+++FD M     KPD   Y+ LIN +C+A R+DEA +L  EM 
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
            +G   + V++N ++ GLC+ G++ EA  + + +  +G   N  +Y I+L+  C++G L 
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           KA  L R M      P+    N L+  +CK+G  +DA      L  +G +P    +  ++
Sbjct: 343 KAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402

Query: 492 ELICR 496
             +C+
Sbjct: 403 NGLCK 407



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 168/313 (53%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PNTC  NILI   C+   ++  F VL +  K  +  P ++T++TLI+GL K G+F +A
Sbjct: 6   LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQ-PTIVTFTTLINGLGKVGKFAQA 64

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +ELF++MV++    PD  TY  +I+G C+ G+   A  + + M+  GC  NV  Y+TL++
Sbjct: 65  VELFDDMVARG-CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK  ++ EA ++F  MK   + P    YT+LI   C   R  EA  LL EM       
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++VTFN+++   C+EGK+  A G+L+ +   G+  +  +Y  ++       E+ +A +L 
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            +M+ +G  P   + + L+   CKA   ++A      ++  G  P + S+  L+  +C+ 
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303

Query: 498 RKLLFAFELLDEL 510
            +L  A +L   +
Sbjct: 304 GRLREAQDLFKNM 316



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 38/409 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F+ +   +G   ++ TY TI++ L +  +      + ++M    C+ +   +  L+
Sbjct: 64  AVELFDDMVA-RGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLI 122

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                       L++F  +       P++   ++ +  L   ++   A   L      L 
Sbjct: 123 HSLCKYRRVNEALDIFSYMKA-KDISPTIFTYTSLIQGLCNFSRWKEASALLN-EMTSLN 180

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK----------SQMSY------------ 235
           + PN   FN+L+   CK G + +A  VLK M +          + + Y            
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 236 ------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                       P++ +YS LI+G CK  R  EA +LF EM+ +    P+ ++YN LI G
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGST-PNNVSYNTLIHG 299

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G++  A+ + + M  NG  PN++ Y  L++GFCK+G L +A  +F  M++  LKP+
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  L+N  C++G + +A EL  E+   G + ++  +  I+ GLC+EG ++EAL    
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFR 419

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
            +  DG   ++ SY +++    Q  +  +A+ L+  M  RGF+    T+
Sbjct: 420 NMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTT 468



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 122/242 (50%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+  T N+LI+ FC+  +VD    ++      G  P +  +TTL+NG  K GK  +A E+
Sbjct: 8   PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD+M     +PD   YTT+IN  C+ G    A  L K+M+E GC+ ++VT++ ++  LC+
Sbjct: 68  FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             ++ EAL +   +    I     +Y  ++   C     ++A  LL  M     +P+  T
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+   CK G    A   L  + EMG +P+  ++  L+       +++ A +L D ++
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247

Query: 512 IK 513
            K
Sbjct: 248 TK 249



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 101/204 (49%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+  G +PN      L+N FC+  ++     V  +     L+P  + +TTLIN   + G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             +A+EL  +M  RGC+ D  T+  I+ GLC+ G+   A G+ +K+   G  LN  +Y  
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+   + +A+++   M  +   P   T   L+  LC     ++A+  L  +  + 
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 480 FKPESDSWALLVELICRGRKLLFA 503
             P   ++ +LV+  C+  K+L A
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAA 204



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 67/145 (46%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M+  G   +  T NI++   C+  +++    +L K    G+     ++  ++N   + G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
             +A+EL   M+ RG  P   T   ++  LCK G    AA     + E G +    +++ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 490 LVELICRGRKLLFAFELLDELVIKE 514
           L+  +C+ R++  A ++   +  K+
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKD 145


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 229/454 (50%), Gaps = 15/454 (3%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    + +++ E +   +LE F ++S    F H + TY T++DKL R  + + V  +L+
Sbjct: 39  VSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQ 98

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           QM  E     + +F  ++K +   +L E+ L+MF++I     E PS+K  +  L+ L+  
Sbjct: 99  QMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCE-PSVKIYNLVLDALLSQ 157

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           N   +  N L  + +   L+PN   +N+L+K  C+ G ++ A ++L EM       P+ +
Sbjct: 158 NLFKMI-NALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCD-PDDV 215

Query: 240 TYSTLIDGLCKNGRFREAIEL---FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           +Y+T+I  +CK G   +A EL   FE +V           YN LI G C+  +   A  +
Sbjct: 216 SYTTVISSMCKLGDVDKARELAMKFEPVVP---------VYNALIHGVCKECRFKEAFDL 266

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           M  M + G +PNV +Y+T+++     G ++ +  VF  M     +P+   +T+LI  F  
Sbjct: 267 MNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFV 326

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            GRV +A+ L   M   G   ++V +N ++ GLC +G ++EA+ +  ++  D I  N  +
Sbjct: 327 RGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTT 386

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++    + G+L  A E    M+  G  P+      ++  LC+  M + A   +  ++
Sbjct: 387 YSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMI 446

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G  P   ++   ++ +CR  ++ +A  +LD++
Sbjct: 447 SDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQM 480



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 200/435 (45%), Gaps = 42/435 (9%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E F+ ++E   +G + N  +Y+T++  L+     E   AV  +M    C+ +   F +L+
Sbjct: 262 EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLI 321

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K F    +  RV +     + + RE  S                                
Sbjct: 322 KGFF---VRGRVGDAVGLWNLMIREGVS-------------------------------- 346

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN   +N LI   C  G ++ A  V  +M+K  +  PN+ TYST+I G  K+G    A
Sbjct: 347 --PNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIR-PNVTTYSTIIYGFAKSGDLVSA 403

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E + +M++     P+ + Y  ++D  C+    D+A  +++ M ++GC P V  +   + 
Sbjct: 404 CETWNKMINCG-CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIK 462

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+ G+++ A  V D+M+ +   P+   Y  L++   RA    EA  L++E++ER  + 
Sbjct: 463 GLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEF 522

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT+N I+ G    G  ++ L +L K+  +GI L+  +    +N  C+ G+++ AI++L
Sbjct: 523 DCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVL 582

Query: 438 -RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             +   + F     T   +L  +C     E+A + L  +++ G  P   +W +LV     
Sbjct: 583 DNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFS 642

Query: 497 GRKLLFAFELLDELV 511
               +    +LD+++
Sbjct: 643 KLGHMGPIRILDDII 657


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 183/326 (56%), Gaps = 6/326 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N+LI   CK G L+ A + L  M  S    PN+IT++ ++  +C  GR+ +A 
Sbjct: 114 KPDVVTYNVLINGICKEGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMCSTGRWMDAE 172

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +L  +M+ K    P  +T+N+LI+  CR G + RA  I+E M  +GC PN  +Y  L++G
Sbjct: 173 KLLSDMLRKG-CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 231

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FCKE K+  A E  D M +    PD + Y TL+   C+ G+VD A+E+L ++  +GC   
Sbjct: 232 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 291

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+N ++ GL + GK E A+ +L+++   G+  +  +Y  +++   ++G++++AI+   
Sbjct: 292 LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH 351

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P+  T N +++ LCK+   + A   L  ++    KP   ++ +L+E I    
Sbjct: 352 DLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 411

Query: 499 KLLFAFELLDEL----VIKESGTIQV 520
               A +LL+EL    ++K+S   QV
Sbjct: 412 LAKEALDLLNELCSRGLVKKSSAEQV 437



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 146/274 (53%), Gaps = 1/274 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           +L  +S  +   CK     +A++L +EM +K    PD +TYNVLI+G C+ G++D A K 
Sbjct: 81  SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKF 139

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +  M + GC PNV  +  ++   C  G+  +A+++  +M      P  + +  LIN  CR
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G +  A+++L++M   GC  + +++N +L G C+E K++ A+  L+ +   G Y +  +
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +L   C+ G+++ A+E+L  +  +G  P   T N ++  L K G  E A   L  + 
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G KP+  +++ LV  + R  K+  A +   +L
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 108/194 (55%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKE  + +A ++ DEM+N   KPD + Y  LIN  C+ GR+DEA++ L  M   GC+ ++
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T NIIL  +C  G+  +A  +L  +   G   +  ++ I++NF C++G L +AI++L  
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G  P+  + N LL   CK    + A   L  +V  G  P+  ++  L+  +C+  K
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272

Query: 500 LLFAFELLDELVIK 513
           +  A E+L++L  K
Sbjct: 273 VDVAVEILNQLSSK 286



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 90/166 (54%)

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
           G++  +   C+   V +A++LL EM+ +G K D+VT+N+++ G+C+EG+++EA+  L  +
Sbjct: 84  GFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 143

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G   N  ++ I+L   C  G    A +LL  ML +G  P   T N L+  LC+ G+ 
Sbjct: 144 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             A   L  +   G  P S S+  L+   C+ +K+  A E LD +V
Sbjct: 204 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 249



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 39/229 (17%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K D  +E  D  V        +++   ++ +  + +   A+EI N +S  KG +    TY
Sbjct: 237 KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS-SKGCSPVLITY 295

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
            T++D L++  K E    +L +M        +G+                          
Sbjct: 296 NTVIDGLSKVGKTERAIKLLDEMR------RKGL-------------------------- 323

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
               KP +   S+ ++ L    +VD A  F  +  + L ++PN   +N ++   CK    
Sbjct: 324 ----KPDIITYSSLVSGLSREGKVDEAIKFF-HDLEGLGIRPNAITYNSIMLGLCKSRQT 378

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           + A + L  M  S+   P   TY+ LI+G+   G  +EA++L  E+ S+
Sbjct: 379 DRAIDFLAYM-ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 426


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 173/313 (55%), Gaps = 5/313 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NTC +NIL+K  C  G ++ A ++  EM     S P+++TY  ++ G C       AI+L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA----SPPDVVTYGIMVHGYCTLSELETAIKL 307

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             EM ++   L + + Y  +I   C  G+V  A +++E M  +G   +   +TT+M+GFC
Sbjct: 308 LSEMAARGLEL-NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++G L  A+  FDEM+   L  D + YT LIN  CRAG + EA  +L+EM+++G   D V
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+ +++ G C+ GK+ EA  +  K+    +  N  +Y  + +  C++G++  A ELL  M
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM 486

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +  T N L+  LCKAG  E A   +  + E G KP+  ++  ++  +C+ ++L
Sbjct: 487 CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546

Query: 501 LFAFELLDELVIK 513
             A  LL E++ K
Sbjct: 547 DRAHSLLQEMLDK 559



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 171/317 (53%), Gaps = 2/317 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q   L  +   +  LI   C+ G L+ A  VL+EM+   +   + +TY+ LIDG CK G+
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV-DAVTYTVLIDGYCKVGK 440

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA  +  +MV K ++ P+ +TY  L DG C+ G V  A +++  M + G   N+F Y 
Sbjct: 441 MTEAFLVHNKMVQK-RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYN 499

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +L+NG CK G L++A     +M    LKPD   YTT+I   C++  +D A  LL+EM ++
Sbjct: 500 SLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K  IVT+N+++ G C  G++E    +LE +    I+ N  +Y  ++   C +  ++  
Sbjct: 560 GIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKST 619

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            E+ + ML +  +P+  T N L+   CKA   ++A      ++E GF+  + S+  L+ L
Sbjct: 620 TEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRL 679

Query: 494 ICRGRKLLFAFELLDEL 510
           + + +K   A  L +++
Sbjct: 680 LNKKKKFTEARRLFEKM 696



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 172/349 (49%), Gaps = 35/349 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + I++  +C    LE+A ++L EM    +   N + Y+++I  LC  G+  +A+ 
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL-NPVAYTSVIALLCDEGQVSDAVR 341

Query: 260 LFEEMV----------------------------------SKDQILPDALTYNVLIDGFC 285
           + E+MV                                   K  +  D +TY  LI+G C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R G++  A+++++ M++ G + +   YT L++G+CK GK+ EA  V ++M    + P+ +
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YT L +  C+ G V  A ELL EM  +G + +I T+N ++ GLC+ G +E+A+  +  +
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+  +  +Y  ++   CQ  EL++A  LL+ ML +G  P   T N L+   C +G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           E     L  ++E    P + ++  L++  C  + +    E+   ++ +E
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 168/352 (47%), Gaps = 8/352 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   +  TY  +++ L R  + +  + VL++M  +        +  L+  +      
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG-- 439

Query: 147 ERVLEMF--HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            ++ E F  H      R  P++   +   + L +   V  A N L +      L+ N   
Sbjct: 440 -KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV-CAANELLHEMCSKGLELNIFT 497

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   CK G LE A   + +M ++ +  P++ TY+T+I  LC++     A  L +EM
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK-PDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K  I P  +TYNVL++GFC  G+V+  K+++E+M     +PN   Y +LM  +C E  
Sbjct: 557 LDKG-IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++   E++  M +  + P+   Y  LI   C+A  + EAL    EM E+G +    ++N 
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           ++  L ++ K  EA  + EK+  + +      Y   ++ S  +  LE  + L
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLAL 727



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 13/189 (6%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA ++F E    L + +T  Y  L+   C AGR+ +A +L  EM       D+VT+ I
Sbjct: 238 LDEAVQLFQE----LPEKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C   ++E A+ +L ++   G+ LN  +Y  V+   C +G++  A+ ++  M+  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM---GFKPESDSWALLVELICRGRKLL 501
            +   A    ++   C+ G   D A A     EM   G   +  ++  L+  +CR  +L 
Sbjct: 351 VVLDAAVFTTVMSGFCRKG---DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 502 FAFELLDEL 510
            A  +L E+
Sbjct: 408 EAERVLQEM 416



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 125/285 (43%), Gaps = 4/285 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QK    N  TY  + D L +     A + +L +M  +  + +   + +L+         E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +     +      KP +   +T +  L +S ++D A + L+       +KP    +N+
Sbjct: 513 QAMRTMIDMDEAGL-KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTIVTYNV 570

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G +E    +L+ M +  + +PN  TY++L+   C     +   E+++ M+S+
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNI-HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +++P+  TYN+LI G C+   +  A      M   G      +Y  L+    K+ K  E
Sbjct: 630 -EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           A+ +F++M+   L  +   Y   I+       ++  L L  E+ E
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 187/350 (53%), Gaps = 38/350 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++PN   +N L++  CK      A E++++M  +   S P+++TYSTL+ G CK G+  E
Sbjct: 41  IQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEE 100

Query: 257 AIELFEEMVSKDQILPDAL-----------------------------------TYNVLI 281
           + EL +E++S+  + PDAL                                   T+N LI
Sbjct: 101 SRELLKEVISRG-LRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLI 159

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G CR   ++ A  +++ M  +G   +V  Y TLM+G CK G+LQEA+++ + MK     
Sbjct: 160 SGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA 219

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + Y++ +   C++G+V +A ++L++M++     ++VT+N IL GLC+ GKI+ AL M
Sbjct: 220 PDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEM 279

Query: 402 LEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +E++   DG  LN   Y  V++  C+ G  ++A  ++  M   G  P   T + L+  LC
Sbjct: 280 MEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLC 339

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           KAG  E+A  A+  +   G KP + ++  LV  +C   +L  A  +++E+
Sbjct: 340 KAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 178/317 (56%), Gaps = 8/317 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    FN LI   C+   LE A  +L++M  S +   +++TY+TL+DGLCK GR +EA +
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVK-ADVVTYNTLMDGLCKAGRLQEAEQ 208

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L E M +     PD + Y+  + G C+ GKV  A +++E M+++  +PNV  Y T+++G 
Sbjct: 209 LLERMKASG-CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGL 267

Query: 320 CKEGKLQEAKEVFDEMKNF-LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           CK GK+  A E+ ++M +      + +GY+T+++  C+ GR  EA  +++ M   GC+ D
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VT++ ++ GLC+ GKIEEA+  + ++  +G   N  +Y  +++  C  G L +A  ++ 
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387

Query: 439 LMLCRGFL-----PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            M   G       P  +T N L+  LCKAG  +DA      +   G  P+  S++ +VE 
Sbjct: 388 EMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447

Query: 494 ICRGRKLLFAFELLDEL 510
           + R  + L A  +L E+
Sbjct: 448 LARSGRALQAEMILSEV 464



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 165/287 (57%), Gaps = 3/287 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN +T++ L++G  K GR  +   L E M ++D I P+ ++YN L++G C+  +   A++
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARD-IQPNVVSYNGLLEGLCKLERWHEAEE 66

Query: 296 IMEFMKNNG--CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           ++  M + G    P++  Y+TL++G+CK GK++E++E+  E+ +  L+PD + YT ++  
Sbjct: 67  LVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C++ R+ EALELL+EM   GC   ++TFN ++ G CRE  +E A  +L+K+   G+  +
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +++  C+ G L++A +LL  M   G  P     +  +  LCK+G   DA   L 
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
            + +    P   ++  +++ +C+  K+  A E+++++   +   + V
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 145/291 (49%), Gaps = 16/291 (5%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK----FHEGIFLNLMKHFSNCSL 145
           G   +  TY T++D L +  + +  + +L +M    C      +      L K       
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDA 241

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           H+ VLE     H      P++   +T L+ L +S ++D A   ++          N   +
Sbjct: 242 HQ-VLEQMRDSH----HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGY 296

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           + ++   CK G  + A  V++ M ++    P+++TYS+L++GLCK G+  EA+E   EM 
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAG-CRPDVVTYSSLVNGLCKAGKIEEAVEAVREM- 354

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-----CNPNVFNYTTLMNGFC 320
           + +   P+A+TY  L+ G C  G++  A++++E M + G     C P+V  Y  L+ G C
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLC 414

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           K G++ +A + F  M++    PD + Y+T++    R+GR  +A  +L E++
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 108/265 (40%), Gaps = 57/265 (21%)

Query: 41  DPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYAT 100
           DP V T +T +D   +S  I                 ALE+   ++   G   N   Y+T
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDT---------------ALEMMEQMASSDGCGLNVVGYST 298

Query: 101 ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPIT 160
           ++D L +  + +   +V+  M    C                                  
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGC---------------------------------- 324

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
             +P +   S+ +N L ++ +++ A   ++        KPN   +  L+   C  G L  
Sbjct: 325 --RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME-GCKPNAVTYCSLVHGLCSCGRLAE 381

Query: 221 AFEVLKEMKKSQMSY----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           A  +++EM           P++ TY+ LI GLCK GR  +A++ F+ M S+    PD ++
Sbjct: 382 AERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG-CDPDGVS 440

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMK 301
           Y+ +++G  R G+  +A+ I+  ++
Sbjct: 441 YSTIVEGLARSGRALQAEMILSEVR 465


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 167/309 (54%), Gaps = 5/309 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N+LI  +CK G +E A  VL     +    PN  TY  ++  LC  G+ ++A+++ +  
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHTSVA----PNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + + +  PD +T  VLID  C+   V +A K+   M+  GC P+V  Y  L+ GFCKEG+
Sbjct: 198 L-QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA     ++ ++  + D I +  ++   C  GR  +A++LL  M  +GC   +VTFNI
Sbjct: 257 LDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNI 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LC++G + +AL +LE +   G   N  S+  ++   C +  +++AIE L +M+ RG
Sbjct: 317 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N LL  LCK G  +DA + L  L   G  P   S+  +++ + +  K   A 
Sbjct: 377 CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAV 436

Query: 505 ELLDELVIK 513
           ELL+E+  K
Sbjct: 437 ELLEEMCYK 445



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 181/374 (48%), Gaps = 41/374 (10%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           +N   +S +++ A   L     H  + PN   ++ ++   C RG L+ A +VL    +S+
Sbjct: 146 INAYCKSGEIEEALRVL----DHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSK 201

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
             YP+++T + LID  CK     +A++LF EM  K    PD +TYNVLI GFC+ G++D 
Sbjct: 202 -CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKG-CKPDVVTYNVLIKGFCKEGRLDE 259

Query: 293 A-----------------------------------KKIMEFMKNNGCNPNVFNYTTLMN 317
           A                                    K++  M   GC P+V  +  L+N
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN 319

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C++G L +A  V + M      P++  +  LI  FC    +D A+E L+ M  RGC  
Sbjct: 320 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYP 379

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DIVT+NI+L  LC++GK+++A+ +L +L   G   +  SY  V++   + G+ E A+ELL
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 439

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G  P   T   ++  L + G   +A      L   G KP +  +  ++  +C+ 
Sbjct: 440 EEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKA 499

Query: 498 RKLLFAFELLDELV 511
           ++   A + L ++V
Sbjct: 500 QQTSLAIDFLVDMV 513



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 160/296 (54%), Gaps = 2/296 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP+   +N+LIK  CK G L+ A   LK++  S     ++I+++ ++  LC  GR+ +A+
Sbjct: 238 KPDVVTYNVLIKGFCKEGRLDEAIIFLKKLP-SYGCQSDVISHNMILRSLCSGGRWMDAM 296

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +L   M+ K    P  +T+N+LI+  C+ G + +A  ++E M  +G  PN  ++  L+ G
Sbjct: 297 KLLATMLRKG-CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 355

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FC    +  A E  + M +    PD + Y  L+   C+ G+VD+A+ +L ++  +GC   
Sbjct: 356 FCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPS 415

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++++N ++ GL + GK E A+ +LE++ Y G+  +  +   V+    ++G++ +AI+   
Sbjct: 416 LISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFH 475

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +   G  P+    N +++ LCKA     A   L  +V  G KP   S+  L++ I
Sbjct: 476 YLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGI 531



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 33/296 (11%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L +NG   E     E M +K +I PD +    LI  FC+ G+   A +IM  ++ +G   
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKI-PDVVACTALIREFCKIGRTKNATRIMGILEESGAVI 137

Query: 308 NVFNYTTLMNGFCKE--------------------------------GKLQEAKEVFDEM 335
           +  +Y  L+N +CK                                 GKL++A +V D  
Sbjct: 138 DANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PD +  T LI+  C+   V +A++L  EM+ +GCK D+VT+N+++ G C+EG++
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA+  L+KL   G   +  S+ ++L   C  G    A++LL  ML +G  P   T N L
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC+ G+   A   L  + + G  P S S+  L++  C  + +  A E L+ +V
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 3/228 (1%)

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R G+++   + +E+M N G  P+V   T L+  FCK G+ + A  +   ++      D  
Sbjct: 81  RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  LIN +C++G ++EAL +L          +  T++ +L  LC  GK+++A+ +L++ 
Sbjct: 141 SYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
                Y +  +  ++++ +C++  + +A++L   M  +G  P   T N L+   CK G  
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++A I L  L   G + +  S  +++  +C G + + A +LL  ++ K
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRK 305


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 184/314 (58%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N L+   C+ G +++A  ++  M++  +  P+L+T++T+++GLCK GR  +A +
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVR-PSLVTFNTVVNGLCKAGRMEDARK 246

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+EM +++ + PD ++YN L+ G+C+ G +  A  +   M   G  P+V  +T+L++  
Sbjct: 247 MFDEM-AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAM 305

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G L+ A  +  +M+   L+ +   +T LI+ FCR G +D+AL  +KEM+E   +  +
Sbjct: 306 CRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSV 365

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +N+++ G C+ G+++EA  ++ ++   G+  +  +Y  +L+  C+ G+ + A EL R 
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRK 425

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML +G +P   T + L+  LC+     DA      ++++G +P+  ++  L++  C+   
Sbjct: 426 MLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN 485

Query: 500 LLFAFELLDELVIK 513
           +  A  L DE++ K
Sbjct: 486 VQKALSLHDEMIKK 499



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 179/314 (57%), Gaps = 1/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +NIL++  C RG  E A  V+ +  +     PN++TY+TL+   C+ G   +A
Sbjct: 150 VAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEV-DA 208

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E    ++ +  + P  +T+N +++G C+ G+++ A+K+ + M   G  P+  +Y TL++
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK G L EA  VF EM    + PD + +T+LI+  CRAG ++ A+ L+ +M+ERG + 
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +  TF  ++ G CR G +++AL  ++++    I  +   Y +++N  C+ G +++A EL+
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G  P   T + +L   CK G  + A      +++ G  P++ +++ L+  +C  
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448

Query: 498 RKLLFAFELLDELV 511
           R+L  A EL ++++
Sbjct: 449 RRLGDACELFEKML 462



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 187/351 (53%), Gaps = 3/351 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +     + +VD A+  +    +   ++P+   FN ++   CK G +E A +
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREG-GVRPSLVTFNTVVNGLCKAGRMEDARK 246

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  EM +  ++ P+ ++Y+TL+ G CK G   EA+ +F EM  K  ++PD +T+  LI  
Sbjct: 247 MFDEMAREGLT-PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG-VVPDVVTFTSLIHA 304

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            CR G ++RA  ++  M+  G   N F +T L++GFC+ G L +A     EM+   ++P 
Sbjct: 305 MCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPS 364

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  LIN +C+ GR+DEA EL+ EM+ +G K D+VT++ IL G C+ G  + A  +  
Sbjct: 365 VVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNR 424

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+   G+  +  +Y  ++   C++  L  A EL   ML  G  P   T   L+   CK G
Sbjct: 425 KMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEG 484

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             + A      +++ G  P+  ++++L++ + +  +   A  LL +L  ++
Sbjct: 485 NVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYED 535



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 209/434 (48%), Gaps = 24/434 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E    V  + G   +  T+ T+++ L +  + E    +  +M  E        +  L+
Sbjct: 208 AAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLV 267

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             +         L +F ++       P +   ++ ++ +  +  ++ A   +    +   
Sbjct: 268 SGYCKAGCLHEALAVFAEMAQ-KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER-G 325

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+ N   F  LI   C+ G L+ A   +KEM++ ++  P+++ Y+ LI+G CK GR  EA
Sbjct: 326 LRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQ-PSVVCYNVLINGYCKLGRMDEA 384

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL  EM +K  + PD +TY+ ++ G+C+ G  D A ++   M   G  P+   Y++L+ 
Sbjct: 385 RELIHEMEAKG-MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIR 443

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+E +L +A E+F++M    L+PD   YTTLI+  C+ G V +AL L  EM ++G   
Sbjct: 444 GLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLP 503

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT+++++ GL +  + +EA  +L KL+Y+    +   Y  +++  C+  E +  + LL
Sbjct: 504 DVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH-CCRTAEFKSVVALL 562

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
                +GF                 G+   A      +++  +K +   +++L+   CRG
Sbjct: 563 -----KGF--------------SMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRG 603

Query: 498 RKLLFAFELLDELV 511
             ++ A     +L+
Sbjct: 604 GNIMKALSFHKQLL 617



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/378 (22%), Positives = 157/378 (41%), Gaps = 90/378 (23%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F  ++ QKG   +  T+ +++  + R    E   A++ QM     + +E  F  L+
Sbjct: 279 ALAVFAEMA-QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALI 337

Query: 138 KHF-SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
             F  N  L + +L M  K     R +PS+   +  +N   +  ++D A+  + +  +  
Sbjct: 338 DGFCRNGFLDDALLAM--KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI-HEMEAK 394

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-----SQMSYPNLI------------ 239
            +KP+   ++ ++  +CK G  +SAFE+ ++M K       ++Y +LI            
Sbjct: 395 GMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDA 454

Query: 240 -----------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
                            TY+TLIDG CK G  ++A+ L +EM+ K  +LPD +TY+VLID
Sbjct: 455 CELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG-VLPDVVTYSVLID 513

Query: 283 GF----------------------------------CRG----------------GKVDR 292
           G                                   CR                 G +++
Sbjct: 514 GLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQ 573

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A K+ + M +     +   Y+ L++G C+ G + +A     ++      P++    +L+ 
Sbjct: 574 ADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVR 633

Query: 353 CFCRAGRVDEALELLKEM 370
                G   EA  +++E+
Sbjct: 634 GLFEEGMTVEADNVIQEL 651



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 52/193 (26%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            L L+P+   +  LI  HCK G ++ A  +  EM K  +  P+++TYS LIDGL K+ R 
Sbjct: 463 QLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGV-LPDVVTYSVLIDGLSKSART 521

Query: 255 REAIELFEEMVSKDQILPDAL--------------------------------------- 275
           +EA  L  ++  +D + PD +                                       
Sbjct: 522 KEAQRLLFKLYYEDPV-PDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQS 580

Query: 276 -----------TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
                       Y+VLI G CRGG + +A    + +   G +PN  +  +L+ G  +EG 
Sbjct: 581 MLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGM 640

Query: 325 LQEAKEVFDEMKN 337
             EA  V  E+ N
Sbjct: 641 TVEADNVIQELLN 653



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G    ++ +N +L  L  +  +  A  +L  +  DG+  N  +Y I++   C +G+ E+A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 434 IELL-RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV-EMGFKPESDSWALLV 491
           + ++   M   G  P+  T N L+   C+AG   DAA  L G++ E G +P   ++  +V
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEV-DAAERLVGVMREGGVRPSLVTFNTVV 232

Query: 492 ELICRGRKLLFAFELLDELV 511
             +C+  ++  A ++ DE+ 
Sbjct: 233 NGLCKAGRMEDARKMFDEMA 252


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 180/348 (51%), Gaps = 3/348 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++    T +N L +      A   L+ S +    +PN  +F+ LI   CK   +  AF
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLR-SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  EM    +S PN++TY++LI GLCK   ++    L  EMV   +I+PD  T N ++D
Sbjct: 231 NIFSEMITKGIS-PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTVVD 288

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+ G V  A  +++ M + G  PNV  Y  LM+G C   ++  A +VFD M +     
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + I Y TLIN +C+   VD+A+ L +EM  +    + VT+N ++ GLC  G++++A+ + 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   G   +  +YR + ++ C+   L+KA+ LL+ +    + P       +L  +C+A
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G  EDA      L   G +P   ++ +++  +C+   L  A +L  E+
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 213/441 (48%), Gaps = 50/441 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  N  TY T+++ L +     A   +LR M    C+          
Sbjct: 159 ALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ---------- 207

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     P++   ST ++ L +  QV  A N   +S    +
Sbjct: 208 --------------------------PNVVVFSTLIDSLCKDRQVTEAFNI--FSEMITK 239

Query: 198 -LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + PN   +N LI   CK    +    ++ EM  S++  P++ T +T++D LCK G   E
Sbjct: 240 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI-MPDVFTLNTVVDALCKEGMVAE 298

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++ + M+ +  + P+ +TYN L+DG C   +VD A K+ + M +  C  NV +Y TL+
Sbjct: 299 AHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK   + +A  +F+EM    L P+T+ Y TLI+  C  GR+ +A+ L  EM  RG  
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKL----WYDGIYLNKASYRIVLNFSCQKGELEK 432
            D+VT+  +   LC+   +++A+ +L+ +    W   I +    Y  +L+  C+ GELE 
Sbjct: 418 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI----YTTILDGMCRAGELED 473

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A +L   +  +G  P+  T N ++  LCK G+  +A+     + + G  P   ++ L+  
Sbjct: 474 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533

Query: 493 LICRGRKLLFAFELLDELVIK 513
              R  + L   ELL+E++ +
Sbjct: 534 GFLRNNEALRTIELLEEMLAR 554



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 147/298 (49%), Gaps = 2/298 (0%)

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           TL+ A      M   Q   P+ + ++ L+  + K       + L  +M S   I PD  T
Sbjct: 50  TLDEALSTFNRMLHKQ-PPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFG-IPPDVYT 107

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
             ++I+  C   +VD A   +  +   G  P+   +TTL+ G C EGK+ EA  +FD+M 
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +P+ + Y TLIN  C+ G    A+ LL+ M++  C+ ++V F+ ++  LC++ ++ 
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  +  ++   GI  N  +Y  +++  C+  E +    L+  M+    +P   T N ++
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             LCK GM  +A   +  ++  G +P   ++  L++  C   ++  A ++ D +V K+
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 7/260 (2%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E   A+++F+T+   K    N  +Y T+++   + +  +    +  +M+ +    +   +
Sbjct: 330 EVDVAVKVFDTMV-HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREK-PSLKAISTCLNLLIESNQVDLAQNFLKYS 192
             L+    +    +  + +FH++  + R + P L    T  + L ++  +D A   LK +
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEM--VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK-A 445

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            +     P+  I+  ++   C+ G LE A ++   +    +  PN+ TY+ +I GLCK G
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ-PNVWTYNIMIHGLCKQG 504

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              EA +LF EM +K+   P+  TYN++  GF R  +  R  +++E M   G + +V   
Sbjct: 505 LLAEASKLFSEM-NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTT 563

Query: 313 TTLMNGFCKEGKLQEAKEVF 332
           T L+     +G  Q  K++ 
Sbjct: 564 TLLVGMLSDDGLDQSVKQIL 583


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 180/311 (57%), Gaps = 2/311 (0%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+  +++ L+   C+ G L+ A E  KEM+   +S  ++ TY++LI GL + G ++E   
Sbjct: 1118 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS-ADVYTYNSLIHGLSRAGLWKEVTW 1176

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
                MV +    PDA T+ +LIDG C+ GKV  A++I+E M++ G  P++  Y TLMNG 
Sbjct: 1177 FLNLMVDRG-FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGL 1235

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            C  G+L++A ++F+ + +  +K +   Y  LIN +C+  ++DEA    +EM+ +G K   
Sbjct: 1236 CLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPST 1295

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            VT+N ++G LC+ G++  A  +  ++   G +L  ++Y ++L+  C+ G LE+A++L + 
Sbjct: 1296 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQS 1355

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            +      P+    + LL  +C+AG  E+A      + + G +P++ ++ +L+  +C    
Sbjct: 1356 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 1415

Query: 500  LLFAFELLDEL 510
            L  A +LL ++
Sbjct: 1416 LSEAVKLLWQM 1426



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 174/312 (55%), Gaps = 2/312 (0%)

Query: 199  KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            K +   + ++I   CK G    A ++  EM  + +  P+++ YS+L+DGLC+ GR +EA+
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGI-LPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 259  ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            E F+EM  +  I  D  TYN LI G  R G        +  M + G +P+ F +T L++G
Sbjct: 1141 EFFKEMEGRG-ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 1199

Query: 319  FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
             CKEGK+ EA+++ + M++   +PD + Y TL+N  C  G++++A +L + + +RG K +
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 1259

Query: 379  IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            + ++NI++ G C++ KI+EA    E++   G+  +  +Y  ++   CQ G +  A +L  
Sbjct: 1260 VFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319

Query: 439  LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
             M   G     +T   LL  LCK G  E+A      + +   KP  + +++L++ +CR  
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG 1379

Query: 499  KLLFAFELLDEL 510
            KL  A++  DE+
Sbjct: 1380 KLEEAWKQFDEI 1391



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 168/314 (53%), Gaps = 5/314 (1%)

Query: 198  LKPNTCIFNILIKHHCK-RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            ++P+    NILI   C  R            +K+     P+ +T +TL+ G+       +
Sbjct: 977  IQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRG--FEPDAVTVTTLVKGVWMENGIPD 1034

Query: 257  AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
            A++LF+EM +K  +L DA TY +LI+G C+  K   A K+ E MK N C  +VF Y  ++
Sbjct: 1035 AVQLFDEM-TKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMII 1092

Query: 317  NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            +  CK+G   EA ++F EM    + PD + Y++L++  CR GR+ EALE  KEM+ RG  
Sbjct: 1093 DALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152

Query: 377  ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            AD+ T+N ++ GL R G  +E    L  +   G   +  ++ I+++  C++G++ +A ++
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212

Query: 437  LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            L LM  +G  P   T N L+  LC  G  EDA      L + G K    S+ +L+   C+
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272

Query: 497  GRKLLFAFELLDEL 510
             +K+  AF   +E+
Sbjct: 1273 DQKIDEAFRFFEEM 1286



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 168/294 (57%), Gaps = 6/294 (2%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+   F ILI   CK G +  A ++L E+ + +   P+++TY+TL++GLC  G+  +A +
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQIL-ELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            LFE +  +  I  +  +YN+LI+G+C+  K+D A +  E M+  G  P+   Y TL+   
Sbjct: 1247 LFESLADRG-IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305

Query: 320  CKEGKLQEAKEVFDEMK--NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            C+ G+++ A+++F EM+     LK  T  Y  L++  C+ G ++EA++L + +K+   K 
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLST--YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKP 1363

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +I  F+I+L G+CR GK+EEA    +++  +G+  +  +Y I++N  C KG L +A++LL
Sbjct: 1364 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423

Query: 438  RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
              M  +G LP   T N ++  L K     +A   L  +    F P+    ++L+
Sbjct: 1424 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 191/379 (50%), Gaps = 5/379 (1%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            AL++F+ +    G   +   Y++++D L R+ + +      ++M           + +L+
Sbjct: 1104 ALDMFSEMI-GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 1162

Query: 138  KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               S   L + V   F  +       P     +  ++ L +  +V  AQ  L+   +H  
Sbjct: 1163 HGLSRAGLWKEV-TWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM-RHKG 1220

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             +P+   +N L+   C  G LE A ++ + +    +   N+ +Y+ LI+G CK+ +  EA
Sbjct: 1221 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL-NVFSYNILINGYCKDQKIDEA 1279

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
               FEEM  K  + P  +TYN LI   C+ G+V  A+K+   M+  G    +  Y  L++
Sbjct: 1280 FRFFEEMRPKG-LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 1338

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            G CK G L+EA ++F  +K    KP+   ++ L++  CRAG+++EA +   E+ + G + 
Sbjct: 1339 GLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEP 1398

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            D + +NI++ GLC +G + EA+ +L ++   G   +  ++ +++    ++ E+ +AI+LL
Sbjct: 1399 DTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLL 1458

Query: 438  RLMLCRGFLPHYATSNELL 456
              M  R F P  A ++ LL
Sbjct: 1459 EEMRNRNFSPDEAVTSMLL 1477



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/297 (21%), Positives = 120/297 (40%), Gaps = 75/297 (25%)

Query: 285  CRGGKVDRAKKIMEFMKNNGCNP----NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
            CR G +     I  F ++    P    + FN+  L+    K G       ++ ++ +  +
Sbjct: 920  CRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNH--LLASVAKLGYYSTVFPMYRKINDVGI 977

Query: 341  KPDTIGYTTLINCFC--RA---------------------------------GRVDEALE 365
            +PD      LI+C C  RA                                   + +A++
Sbjct: 978  QPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQ 1037

Query: 366  LLKEMKERG----------------------------------CKADIVTFNIILGGLCR 391
            L  EM ++G                                  CK D+ T+ +I+  LC+
Sbjct: 1038 LFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCK 1097

Query: 392  EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            +G   EAL M  ++   GI  +   Y  +++  C+ G L++A+E  + M  RG      T
Sbjct: 1098 DGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYT 1157

Query: 452  SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             N L+  L +AG+ ++    L  +V+ GF P++ ++ +L++ +C+  K+  A ++L+
Sbjct: 1158 YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 197/352 (55%), Gaps = 7/352 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P + + +T +N L +  +++ A + L    +    +PN+  + IL+   CK G +E A  
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLL-VEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EMK+  +   +++ YSTLI G C  G       LF+EM+ K  I P+ + Y+ LI+G
Sbjct: 67  LLGEMKRKGLEV-DVVVYSTLISGFCSKGCLDRGKALFDEMLEKG-ISPNVVVYSCLING 124

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+ G    A  ++  M   G  P+V+ YT ++ G CK+G+ ++A ++FD M     +P 
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ Y  LIN  C+ G + +A ++ + M E+G + ++V++N ++ GLC  GK++EA+ +  
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 404 KLWYDGIYL--NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            L  DG Y+  +  ++  V+   C++G L+KA+E+   M+ RG   +  T + L+    K
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 462 AGMAEDAAIALFGLV-EMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           +G+  D A+ L+  V ++G  P S +++++++  C+   L FA  L   + I
Sbjct: 305 SGII-DKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKI 355



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 209/419 (49%), Gaps = 10/419 (2%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            +Y TI++ L + K+ E    +L +M   +C+ +   +  LM          RV E    
Sbjct: 11  VSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCK---EGRVEEAMRL 67

Query: 156 IHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +  + R+   +  +  ST ++       +D  +       +   + PN  +++ LI   C
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEK-GISPNVVVYSCLINGFC 126

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K+G    A  VL  M +  +  P++ TY+ +I GLCK+GR R+A++LF+ M  K +  P 
Sbjct: 127 KKGLWREATAVLHTMTERGIQ-PDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE-EPS 184

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TYNVLI+G C+ G +  A KI E M   G    V +Y TL+ G C  GKL EA ++F 
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 334 EM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            +      ++PD I + T+I   C+ GR+D+A+E+   M ERG   ++ T +I++G   +
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G I++A+ + +++   G+  +  +Y ++++  C+   L  A  L   M   G  P    
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFD 364

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            N L+  LCK    E A      + E   +P++ S+ ++++   +   +  A ELL+++
Sbjct: 365 YNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 164/282 (58%), Gaps = 3/282 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++++Y+T+I+GLCK  R  +A++L  EM       P++ TY +L+DG C+ G+V+ A +
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEM-EGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  MK  G   +V  Y+TL++GFC +G L   K +FDEM    + P+ + Y+ LIN FC
Sbjct: 67  LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G   EA  +L  M ERG + D+ T+  ++GGLC++G+  +AL + + +   G   +  
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y +++N  C++G +  A ++   ML +G      + N L++ LC  G  ++A      L
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 476 VEMG--FKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           +E G   +P+  ++  +++ +C+  +L  A E+ D ++ + S
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGS 288



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 192/411 (46%), Gaps = 39/411 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG + N   Y+ +++   +   +    AVL  MT    +     +  ++          
Sbjct: 108 EKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRAR 167

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV-DLAQNFLKYSNQHLRLKPNTCIFN 206
           + L++F  +     E+PS    +  +N L +   + D  + F     +  RL+  +  +N
Sbjct: 168 KALDLFDLMTE-KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS--YN 224

Query: 207 ILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
            LI   C  G L+ A ++   + +      P++IT++T+I GLCK GR  +A+E+++ M+
Sbjct: 225 TLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMI 284

Query: 266 SKDQ----------------------------------ILPDALTYNVLIDGFCRGGKVD 291
            +                                    ++P + TY+V+IDGFC+   ++
Sbjct: 285 ERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLN 344

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            AK +   MK +G +P +F+Y TLM   CKE  L++A+ +F EMK    +PDTI +  +I
Sbjct: 345 FAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMI 404

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +   +AG +  A ELL +M++ G   D  T++  +  L + G++EEA G  + +   GI 
Sbjct: 405 DGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGIT 464

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +   Y  ++       E+E+ I LLR M   G +     +N +L  LC +
Sbjct: 465 PDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNS 515



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 136/253 (53%), Gaps = 2/253 (0%)

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            ILPD ++YN +I+G C+  ++++A  ++  M+ + C PN F Y  LM+G CKEG+++EA
Sbjct: 5   NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +  EMK   L+ D + Y+TLI+ FC  G +D    L  EM E+G   ++V ++ ++ G
Sbjct: 65  MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C++G   EA  +L  +   GI  +  +Y  ++   C+ G   KA++L  LM  +G  P 
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N L+  LCK G   DA      ++E G + E  S+  L+  +C   KL  A +L  
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 509 ELVIKESGTIQVP 521
            L+  E G    P
Sbjct: 245 SLL--EDGNYVEP 255



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 156/295 (52%), Gaps = 2/295 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+T  +N+LI   CK G +  AF++ + M +       +++Y+TLI GLC NG+  EA+
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRL-EVVSYNTLIMGLCNNGKLDEAM 240

Query: 259 ELFEEMVSK-DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +LF  ++   + + PD +T+N +I G C+ G++D+A +I + M   G   N+F    L+ 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            + K G + +A E++  +    L P +  Y+ +I+ FC+   ++ A  L   MK  G   
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +  +N ++  LC+E  +E+A  + +++       +  S+ I+++ + + G++  A ELL
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             M   G  P   T +  + RL K G  E+A  A   ++  G  P++  +  L++
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIK 475


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 173/313 (55%), Gaps = 5/313 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NTC +NIL+K  C  G ++ A ++  EM     S P+++TY  ++ G C       AI+L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA----SPPDVVTYGIMVHGYCTLSELETAIKL 307

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             EM ++   L + + Y  +I   C  G+V  A +++E M  +G   +   +TT+M+GFC
Sbjct: 308 LSEMAARGLEL-NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++G L  A+  FDEM+   L  D + YT LIN  CRAG + EA  +L+EM+++G   D V
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+ +++ G C+ GK+ EA  +  K+    +  N  +Y  + +  C++G++  A ELL  M
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM 486

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +  T N L+  LCKAG  E A   +  + E G KP+  ++  ++  +C+ ++L
Sbjct: 487 CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546

Query: 501 LFAFELLDELVIK 513
             A  LL E++ K
Sbjct: 547 DRAHSLLQEMLDK 559



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 170/313 (54%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  +   +  LI   C+ G L+ A  VL+EM+   +   + +TY+ LIDG CK G+  EA
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV-DAVTYTVLIDGYCKVGKMTEA 444

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +  +MV K ++ P+ +TY  L DG C+ G V  A +++  M + G   N+F Y +L+N
Sbjct: 445 FLVHNKMVQK-RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G L++A     +M    LKPD   YTT+I   C++  +D A  LL+EM ++G K 
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            IVT+N+++ G C  G++E    +LE +    I+ N  +Y  ++   C +  ++   E+ 
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + ML +  +P+  T N L+   CKA   ++A      ++E GF+  + S+  L+ L+ + 
Sbjct: 624 KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK 683

Query: 498 RKLLFAFELLDEL 510
           +K   A  L +++
Sbjct: 684 KKFTEARRLFEKM 696



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 172/349 (49%), Gaps = 35/349 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + I++  +C    LE+A ++L EM    +   N + Y+++I  LC  G+  +A+ 
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL-NPVAYTSVIALLCDEGQVSDAVR 341

Query: 260 LFEEMVSKDQIL----------------------------------PDALTYNVLIDGFC 285
           + E+MV    +L                                   D +TY  LI+G C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R G++  A+++++ M++ G + +   YT L++G+CK GK+ EA  V ++M    + P+ +
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YT L +  C+ G V  A ELL EM  +G + +I T+N ++ GLC+ G +E+A+  +  +
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+  +  +Y  ++   CQ  EL++A  LL+ ML +G  P   T N L+   C +G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           E     L  ++E    P + ++  L++  C  + +    E+   ++ +E
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 168/352 (47%), Gaps = 8/352 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   +  TY  +++ L R  + +  + VL++M  +        +  L+  +      
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG-- 439

Query: 147 ERVLEMF--HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            ++ E F  H      R  P++   +   + L +   V  A N L +      L+ N   
Sbjct: 440 -KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV-CAANELLHEMCSKGLELNIFT 497

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   CK G LE A   + +M ++ +  P++ TY+T+I  LC++     A  L +EM
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK-PDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K  I P  +TYNVL++GFC  G+V+  K+++E+M     +PN   Y +LM  +C E  
Sbjct: 557 LDKG-IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++   E++  M +  + P+   Y  LI   C+A  + EAL    EM E+G +    ++N 
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           ++  L ++ K  EA  + EK+  D +      Y   ++ S  +  LE  + L
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLAL 727



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 125/285 (43%), Gaps = 4/285 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QK    N  TY  + D L +     A + +L +M  +  + +   + +L+         E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +     +      KP +   +T +  L +S ++D A + L+       +KP    +N+
Sbjct: 513 QAMRTMIDMDEAGL-KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTIVTYNV 570

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G +E    +L+ M +  + +PN  TY++L+   C     +   E+++ M+S+
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNI-HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +++P+  TYN+LI G C+   +  A      M   G      +Y  L+    K+ K  E
Sbjct: 630 -EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           A+ +F++M+   L  +   Y   I+       ++  L L  E+ E
Sbjct: 689 ARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 13/189 (6%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA ++F E+     + +T  Y  L+   C AGR+ +A +L  EM       D+VT+ I
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C   ++E A+ +L ++   G+ LN  +Y  V+   C +G++  A+ ++  M+  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM---GFKPESDSWALLVELICRGRKLL 501
            +   A    ++   C+ G   D A A     EM   G   +  ++  L+  +CR  +L 
Sbjct: 351 VVLDAAVFTTVMSGFCRKG---DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 502 FAFELLDEL 510
            A  +L E+
Sbjct: 408 EAERVLQEM 416


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 37/351 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN   +N +I   CK G    A +VL+EM  SQ   P+ + Y+TLI G  K G  R A
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMM-SQKIIPDNVVYTTLIHGFFKLGHVRTA 382

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            + F+EM+SK +I PD +TY  LI GF +GGKV   + +   M + G  P+   YTTL++
Sbjct: 383 NKWFDEMLSK-KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLID 441

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            +CK G++  A  + +EM    + P+ + Y  LI+  C+ G +D A ELL EM+++G + 
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++  +N ++ G+C+ G IE+A+ +++++   GI  +  +Y  V++  C+ G+++KA +LL
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-------------------- 477
           + ML RG  P   T N L+   C  GM ED    L  ++E                    
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 478 ---------------MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                           G  P+S+++ +L++  C+ R L  A+ L  E++ K
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 241/500 (48%), Gaps = 44/500 (8%)

Query: 52  DARKR-SRFISHGAAISLIKCEK------EPQCALEIFNTVSEQKGFNHNNATYATILDK 104
           +ARK   + +S+G  +++  C             +E+   V  + G + N  +Y  I+  
Sbjct: 208 EARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYS 267

Query: 105 LARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKP 164
           L R  K +    +L QM + +       +  ++  + +    ++ L++   +  I   KP
Sbjct: 268 LCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ-IKGLKP 326

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           +    ++ + LL +  +   A+  L+      ++ P+  ++  LI    K G + +A + 
Sbjct: 327 NRYTYNSIILLLCKIGKSFEAEKVLREMMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKW 385

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK----DQIL--------- 271
             EM   ++S P+ ITY+TLI G  + G+  E   LF EM+S+    D++          
Sbjct: 386 FDEMLSKKIS-PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 272 ---------------------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
                                P+ +TY  LIDG C+ G++D A ++++ M+  G   NV 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y +++NG CK G +++A ++  EM+   + PD I YTT+I+ +CR G +D+A +LL+EM
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM 564

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            +RG +  +VTFN+++ G C  G +E+   +L  +   GI  +  +Y  ++   C +  +
Sbjct: 565 LDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
               ++ + M  +G  P   T N L+   CKA   ++A      ++E G+ P   S+  L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 491 VELICRGRKLLFAFELLDEL 510
           ++   + +K+L A EL +E+
Sbjct: 685 IKRFYKKKKILEARELFEEM 704



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 172/311 (55%), Gaps = 2/311 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT  +NI+I   C+ G ++ A  +L +M   + S P++++YST+IDG C  G  ++A++L
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMD-FRSSTPDVVSYSTVIDGYCHLGELKKALKL 315

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M  K  + P+  TYN +I   C+ GK   A+K++  M +    P+   YTTL++GF 
Sbjct: 316 MDDMQIKG-LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFF 374

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G ++ A + FDEM +  + PD I YTTLI  F + G+V E   L  EM  RG K D V
Sbjct: 375 KLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEV 434

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+  ++   C+ G++  A  +  ++   G+  N  +Y  +++  C+ GEL+ A ELL  M
Sbjct: 435 TYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM 494

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +    N ++  +CKAG  E A   +  +   G  P++ ++  +++  CR   +
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554

Query: 501 LFAFELLDELV 511
             A +LL E++
Sbjct: 555 DKAHKLLQEML 565



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 172/392 (43%), Gaps = 37/392 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  TY +I+  L +  K    + VLR+M  +       ++  L+  F     H R
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG-HVR 380

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
               +       +  P     +T +    +  +V   QN   +      LKP+   +  L
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF-HEMISRGLKPDEVTYTTL 439

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I  +CK G + +AF +  EM +  M+ PN++TY  LIDGLCK+G    A EL +EM  K 
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMT-PNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 269 ----------------------------------QILPDALTYNVLIDGFCRGGKVDRAK 294
                                              I PDA+TY  +ID +CR G +D+A 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           K+++ M + G  P V  +  LMNGFC  G L++   +   M    + PD I Y TL+   
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C    ++   ++ K M+ +G   D  T+NI++ G C+   ++EA  + +++   G     
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            SY  ++    +K ++ +A EL   M   G +
Sbjct: 679 TSYNALIKRFYKKKKILEARELFEEMRGHGLV 710



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 168/347 (48%), Gaps = 18/347 (5%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC-------SLHERV 149
           TY T++    +  K      +  +M     K  E  +  L+  +          SLH  +
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           ++M           P++      ++ L +  ++D A   L    +   L+ N CI+N ++
Sbjct: 460 VQM--------GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK-GLQLNVCIYNSMV 510

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G +E A +++KEM+ + +  P+ ITY+T+ID  C+ G   +A +L +EM+ +  
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGID-PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG- 568

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + P  +T+NVL++GFC  G ++   +++ +M   G  P+   Y TLM   C    +    
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +++  M+N  + PD+  Y  LI   C+A  + EA  L KEM E+G    + ++N ++   
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++ KI EA  + E++   G+  +   Y   ++   ++G++E  + L
Sbjct: 689 YKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 178/371 (47%), Gaps = 24/371 (6%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLK------------------ 199
            R +PSL+A    +++ + SN + LA   +   + N  L +                   
Sbjct: 128 VRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWG 187

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   F+I  +   + G L  A ++L ++    +SY  ++T  +    L +     E IE
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKL----LSYGLVVTVDSCNAFLSRIANNSEGIE 243

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  ++  +  I  +  +YN++I   CR GKV  A +++  M      P+V +Y+T+++G+
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C  G+L++A ++ D+M+   LKP+   Y ++I   C+ G+  EA ++L+EM  +    D 
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +  ++ G  + G +  A    +++    I  +  +Y  ++    Q G++ +   L   
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T   L+   CKAG   +A      +V+MG  P   ++  L++ +C+  +
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 500 LLFAFELLDEL 510
           L  A ELLDE+
Sbjct: 484 LDTANELLDEM 494



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 4/286 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  ++D L ++ + +  + +L +M  +  + +  I+ +++         E
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +++  ++  +    P     +T ++       +D A   L+       L+P    FN+
Sbjct: 521 QAIKLMKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR-GLQPTVVTFNV 578

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G LE    +L  M +  +  P+ ITY+TL+   C         ++++ M ++
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIV-PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ 637

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD+ TYN+LI G C+   +  A  + + M   G  P V +Y  L+  F K+ K+ E
Sbjct: 638 G-VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILE 696

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           A+E+F+EM+   L  D   Y   ++     G V+  L L  E  E+
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 10/212 (4%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC---FCRAGRVDEA 363
           PN   +        + G L EA+++ D++ ++ L        T+ +C     R     E 
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGL------VVTVDSCNAFLSRIANNSEG 241

Query: 364 LEL-LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           +E+ +K   E G   +  ++NII+  LCR GK++EA  +L ++ +     +  SY  V++
Sbjct: 242 IEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVID 301

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C  GEL+KA++L+  M  +G  P+  T N +++ LCK G + +A   L  ++     P
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP 361

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           ++  +  L+    +   +  A +  DE++ K+
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 180/348 (51%), Gaps = 3/348 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++    T +N L +      A   L+ S +    +PN  +F+ LI   CK   +  AF
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLR-SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  EM    +S PN++TY++LI GLCK   ++    L  EMV   +I+PD  T N ++D
Sbjct: 231 NIFSEMITKGIS-PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTVVD 288

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+ G V  A  +++ M + G  PNV  Y  LM+G C   ++  A +VFD M +     
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + I Y TLIN +C+   VD+A+ L +EM  +    + VT+N ++ GLC  G++++A+ + 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   G   +  +YR + ++ C+   L+KA+ LL+ +    + P       +L  +C+A
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G  EDA      L   G +P   ++ +++  +C+   L  A +L  E+
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 213/441 (48%), Gaps = 50/441 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  N  TY T+++ L +     A   +LR M    C+          
Sbjct: 159 ALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ---------- 207

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     P++   ST ++ L +  QV  A N   +S    +
Sbjct: 208 --------------------------PNVVVFSTLIDSLCKDRQVTEAFNI--FSEMITK 239

Query: 198 -LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + PN   +N LI   CK    +    ++ EM  S++  P++ T +T++D LCK G   E
Sbjct: 240 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI-MPDVFTLNTVVDALCKEGMVAE 298

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++ + M+ +  + P+ +TYN L+DG C   +VD A K+ + M +  C  NV +Y TL+
Sbjct: 299 AHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK   + +A  +F+EM    L P+T+ Y TLI+  C  GR+ +A+ L  EM  RG  
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKL----WYDGIYLNKASYRIVLNFSCQKGELEK 432
            D+VT+  +   LC+   +++A+ +L+ +    W   I +    Y  +L+  C+ GELE 
Sbjct: 418 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI----YTTILDGMCRAGELED 473

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A +L   +  +G  P+  T N ++  LCK G+  +A+     + + G  P   ++ L+  
Sbjct: 474 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533

Query: 493 LICRGRKLLFAFELLDELVIK 513
              R  + L   ELL+E++ +
Sbjct: 534 GFLRNNEALRTIELLEEMLAR 554



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 147/298 (49%), Gaps = 2/298 (0%)

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           TL+ A      M   Q   P+ + ++ L+  + K       + L  +M S   I PD  T
Sbjct: 50  TLDEALSTFNRMLHKQ-PPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFG-IPPDVYT 107

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
             ++I+  C   +VD A   +  +   G  P+   +TTL+ G C EGK+ EA  +FD+M 
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +P+ + Y TLIN  C+ G    A+ LL+ M++  C+ ++V F+ ++  LC++ ++ 
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  +  ++   GI  N  +Y  +++  C+  E +    L+  M+    +P   T N ++
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             LCK GM  +A   +  ++  G +P   ++  L++  C   ++  A ++ D +V K+
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 173/313 (55%), Gaps = 5/313 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NTC +NIL+K  C  G ++ A ++  EM     S P+++TY  ++ G C       AI+L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA----SPPDVVTYGIMVHGYCTLSELETAIKL 307

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             EM ++   L + + Y  +I   C  G+V  A +++E M  +G   +   +TT+M+GFC
Sbjct: 308 LSEMAARGLEL-NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++G L  A+  FDEM+   L  D + YT LIN  CRAG + EA  +L+EM+++G   D V
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+ +++ G C+ GK+ EA  +  K+    +  N  +Y  + +  C++G++  A ELL  M
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEM 486

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +  T N L+  LCKAG  E A   +  + E G KP+  ++  ++  +C+ ++L
Sbjct: 487 CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKEL 546

Query: 501 LFAFELLDELVIK 513
             A  LL E++ K
Sbjct: 547 DRAHSLLQEMLDK 559



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 170/313 (54%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  +   +  LI   C+ G L+ A  VL+EM+   +   + +TY+ LIDG CK G+  EA
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV-DAVTYTVLIDGYCKVGKMTEA 444

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +  +MV K ++ P+ +TY  L DG C+ G V  A +++  M + G   N+F Y +L+N
Sbjct: 445 FLVHNKMVQK-RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G L++A     +M    LKPD   YTT+I   C++  +D A  LL+EM ++G K 
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            IVT+N+++ G C  G++E    +LE +    I+ N  +Y  ++   C +  ++   E+ 
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + ML +  +P+  T N L+   CKA   ++A      ++E GF+  + S+  L+ L+ + 
Sbjct: 624 KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK 683

Query: 498 RKLLFAFELLDEL 510
           +K   A  L +++
Sbjct: 684 KKFTEARRLFEKM 696



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 172/349 (49%), Gaps = 35/349 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + I++  +C    LE+A ++L EM    +   N + Y+++I  LC  G+  +A+ 
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL-NPVAYTSVIALLCDEGQVSDAVR 341

Query: 260 LFEEMVSKDQIL----------------------------------PDALTYNVLIDGFC 285
           + E+MV    +L                                   D +TY  LI+G C
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R G++  A+++++ M++ G + +   YT L++G+CK GK+ EA  V ++M    + P+ +
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YT L +  C+ G V  A ELL EM  +G + +I T+N ++ GLC+ G +E+A+  +  +
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+  +  +Y  ++   CQ  EL++A  LL+ ML +G  P   T N L+   C +G  
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           E     L  ++E    P + ++  L++  C  + +    E+   ++ +E
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 168/352 (47%), Gaps = 8/352 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   +  TY  +++ L R  + +  + VL++M  +        +  L+  +      
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG-- 439

Query: 147 ERVLEMF--HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            ++ E F  H      R  P++   +   + L +   V  A N L +      L+ N   
Sbjct: 440 -KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV-CAANELLHEMCSKGLELNIFT 497

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   CK G LE A   + +M ++ +  P++ TY+T+I  LC++     A  L +EM
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK-PDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K  I P  +TYNVL++GFC  G+V+  K+++E+M     +PN   Y +LM  +C E  
Sbjct: 557 LDKG-IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++   E++  M +  + P+   Y  LI   C+A  + EAL    EM E+G +    ++N 
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           ++  L ++ K  EA  + EK+  + +      Y   ++ S  +  LE  + L
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLAL 727



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 125/285 (43%), Gaps = 4/285 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QK    N  TY  + D L +     A + +L +M  +  + +   + +L+         E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +     +      KP +   +T +  L +S ++D A + L+       +KP    +N+
Sbjct: 513 QAMRTMIDMDEAGL-KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTIVTYNV 570

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C  G +E    +L+ M +  + +PN  TY++L+   C     +   E+++ M+S+
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNI-HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +++P+  TYN+LI G C+   +  A      M   G      +Y  L+    K+ K  E
Sbjct: 630 -EVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           A+ +F++M+   L  +   Y   I+       ++  L L  E+ E
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 13/189 (6%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA ++F E+     + +T  Y  L+   C AGR+ +A +L  EM       D+VT+ I
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C   ++E A+ +L ++   G+ LN  +Y  V+   C +G++  A+ ++  M+  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM---GFKPESDSWALLVELICRGRKLL 501
            +   A    ++   C+ G   D A A     EM   G   +  ++  L+  +CR  +L 
Sbjct: 351 VVLDAAVFTTVMSGFCRKG---DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407

Query: 502 FAFELLDEL 510
            A  +L E+
Sbjct: 408 EAERVLQEM 416


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 217/462 (46%), Gaps = 48/462 (10%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P  A E+F    +Q  F HN  T   +L    + ++ E      +       +  E  +
Sbjct: 81  DPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSY 140

Query: 134 LNLMKHFSNCSLHERVLEMFHKI----------HPITRE--------------------- 162
             LM  F      ++ L +F ++          H I                        
Sbjct: 141 NTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI 200

Query: 163 -KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
             P+L + +  ++ L +S +VD A    K       + P+   +  LI    K+  ++ A
Sbjct: 201 FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKA-IYPDVVTYGALIDGLGKQRRVKEA 259

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           +++ +E  +++  +P ++TY+T+IDGLCK GR   A+ L+++MV +  + PD  TY+ LI
Sbjct: 260 YDLFEE-ARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALI 318

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK-NFLL 340
           +G     + ++A ++ E M + GC+P+V  Y TL++G CK G   +A E+F +M    + 
Sbjct: 319 NGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVC 378

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P+ I YT LI+ FC+  R+ +A++L KEM+ R    D VTF  ++  LC+E +I+EA  
Sbjct: 379 DPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHE 438

Query: 401 MLEKLWY----DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           + E +      D +  N      +L   C+   ++ A +L   ML  G  P  AT   L+
Sbjct: 439 LFESIGKTCKPDSVLFN-----TMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALV 493

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
              C+ G   DA I    ++EMGF PE      L EL+ R R
Sbjct: 494 TGFCRTGRYSDALIMYHEMIEMGFPPERH----LAELVDRTR 531



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 174/329 (52%), Gaps = 8/329 (2%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A    +++ +  +   N    N L+  + K   +E A    +   K+    P+ ++Y+TL
Sbjct: 85  AWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFE-PDEVSYNTL 143

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           ++G  K G  ++A+ LF EM  KD  +    ++N+++ G C GGK+  A ++ + M +  
Sbjct: 144 MNGFFKAGDVKKALALFGEM--KDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDM-SGI 200

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
            +PN+ +YT +++G CK  K+ +A  +F +M +  + PD + Y  LI+   +  RV EA 
Sbjct: 201 FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAY 260

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG-IYLNKASYRIVLNF 423
           +L +E + +GC   +VT+N ++ GLC+ G+IE AL + + +  +  +  +  +Y  ++N 
Sbjct: 261 DLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING 320

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF--K 481
                  EKA EL   ML  G  P   T N LL  LCK+G  ED A+ +F  + +G    
Sbjct: 321 LNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSG-CEDKAMEIFRKMGVGNVCD 379

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
           P   ++ +L++  C+  +L  A +L  E+
Sbjct: 380 PNVITYTVLIDRFCKVDRLGDAVKLAKEM 408


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 244/560 (43%), Gaps = 103/560 (18%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I     +  ++ E +   A   F +++  K F H   TY  +++KL R    + V  +L+
Sbjct: 44  IKESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQ 103

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI-----HPITR------------- 161
           QM  E     E +F+N++  +    L E+ L+MF++I      P  +             
Sbjct: 104 QMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSEN 163

Query: 162 ----------------EKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQ---------- 194
                           ++P++   +  L  L ++N+VD A   L + SN+          
Sbjct: 164 RFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYT 223

Query: 195 ------------------HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
                              +R +PN  ++N LI   C+   ++  F +L +M +  +  P
Sbjct: 224 TVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGID-P 282

Query: 237 NLITYSTLIDGLCK-----------------------------------NGRFREAIELF 261
           N+ITYST+I  L                                      GR  EA+ ++
Sbjct: 283 NVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIW 342

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
             M +++   P+ + YN LI G C  GK+  A  +   M+ NGC+PNV  Y  L++GF K
Sbjct: 343 NRM-AEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK 401

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G L  A E++++M      P+ + YT+++N  CR+    +A  L+++M    C  + VT
Sbjct: 402 AGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVT 461

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           FN  + GLC  G++E A+ +  ++   G   N  +Y  VL+   ++  +++A+EL+  M 
Sbjct: 462 FNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEME 521

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            +G   +  T N +    C  G  E+A   L  ++  G KP++ ++  L    C   K+ 
Sbjct: 522 EKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVK 581

Query: 502 FAFELLDELVIKESGTIQVP 521
            A +LLD+L    +G   VP
Sbjct: 582 TAIQLLDKL---SAGGKWVP 598



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 198/425 (46%), Gaps = 40/425 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG + N  TY+T++  L+     E   AV  +M    C  +   F +LMK +    +  
Sbjct: 277 EKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYF---MRG 333

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           RVLE  +  + +  E                                    +PN   +N 
Sbjct: 334 RVLEALNIWNRMAEEG----------------------------------FEPNVVAYNT 359

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   C  G +  A  V  +M+++  S PN+ TY  LIDG  K G    A E++ +M++ 
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCS-PNVSTYGALIDGFAKAGDLVGASEIWNKMMTN 418

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I P+ + Y  +++  CR     +A  ++E M  + C PN   + T + G C  G+++ 
Sbjct: 419 GCI-PNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVEC 477

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F +M+ +   P+   Y  +++   +  R+ EALEL+ EM+E+G + ++VT+N I G
Sbjct: 478 AINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFG 537

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG-FL 446
           G C  GK EEAL +L K+   G+  +  +Y  +    C +G+++ AI+LL  +   G ++
Sbjct: 538 GFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWV 597

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P  A    LL  +C     E+A + L  ++  G    + +W  LV  +      L    +
Sbjct: 598 PEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHI 657

Query: 507 LDELV 511
           LD+++
Sbjct: 658 LDDIL 662



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 6/313 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL I+N ++E+ GF  N   Y T++  L  + K     +V  +M    C  +   +  L+
Sbjct: 338 ALNIWNRMAEE-GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALI 396

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F+         E+++K+       P++   ++ +N+L  S+    A + ++  +    
Sbjct: 397 DGFAKAGDLVGASEIWNKMM-TNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTD-N 454

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PNT  FN  IK  C  G +E A  +  +M++   S PN+ TY+ ++DGL K  R +EA
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCS-PNIKTYNEVLDGLLKENRIKEA 513

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +EL  EM  K   L + +TYN +  GFC  GK + A K++  M   G  P+   Y TL  
Sbjct: 514 LELVTEMEEKGMEL-NLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTY 572

Query: 318 GFCKEGKLQEAKEVFDEMK-NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            +C +GK++ A ++ D++       P+   YT+L+   C    V+EA+  L +M   G  
Sbjct: 573 AYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGIC 632

Query: 377 ADIVTFNIILGGL 389
            +  T+N ++ GL
Sbjct: 633 LNAATWNALVRGL 645


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 217/450 (48%), Gaps = 10/450 (2%)

Query: 48  DTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
           D C+D    S+ ++   A  +++    P+ AL+ F          H+  TY+ +L  L+ 
Sbjct: 92  DACLD--YFSKTLTPSIAFEVVRGLNNPELALKFFQLSRVNLNLCHSFRTYSFLLRSLSE 149

Query: 108 YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK 167
               E+  AV   M  +       +   L+   ++             +      + SL 
Sbjct: 150 MGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGV------EFSLV 203

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
             +  LN L+  NQVD A  F +     L    ++C FNILI+  C+ G ++ AFE+  E
Sbjct: 204 VYNKLLNQLVRGNQVDEAVCFFR-EQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNE 262

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M+    S P++ITY+TLI+G C+        +L +E++SK+ + PD +TY  +I G+C+ 
Sbjct: 263 MRGFGCS-PDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKL 321

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           GK+++A  +   M ++G  PN F +  L+NGF K G +  A+ +++EM      PD I +
Sbjct: 322 GKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITF 381

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T+LI+  CR G+V+ +L+L  E+  R    +  TF I+   LC+E ++ EA G L  L +
Sbjct: 382 TSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKW 441

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
             I      Y  V++  C+ G +++A  +L  M  +   P   T   L++  C  G   +
Sbjct: 442 RHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSE 501

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRG 497
           A      ++  G  P+S +   L+  + + 
Sbjct: 502 AISIFNRMLGTGCAPDSITMTSLISCLLKA 531



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 2/173 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F  LI  HC+ G +E + ++  E+    +S PN  T++ L + LCK  R  EA  
Sbjct: 376 PDIITFTSLIDGHCRTGKVERSLKLWHELNARNLS-PNEYTFAILTNALCKENRLHEARG 434

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              ++  +  I+     YN +IDGFC+ G VD A  I+  M+   C P+   YT L+ G 
Sbjct: 435 FLRDLKWR-HIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGH 493

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           C +G+L EA  +F+ M      PD+I  T+LI+C  +AG  +EA  +++   E
Sbjct: 494 CMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASE 546



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 115/238 (48%), Gaps = 6/238 (2%)

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TY+ L+      G  + AK + + M  +G +P+      L++     GK   A+   D +
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGV 198

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +  L     + Y  L+N   R  +VDEA+   +E        D  +FNI++ GLCR GK+
Sbjct: 199 EFSL-----VVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKV 253

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PHYATSNE 454
           ++A  +  ++   G   +  +Y  ++N  C+  E+++  +LL+ +L +  L P   T   
Sbjct: 254 DKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTS 313

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           ++   CK G  E A+I    ++  G KP + ++ +L+    +   ++ A  + +E+++
Sbjct: 314 IISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLL 371


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 212/426 (49%), Gaps = 41/426 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  N  TY T+++ L +     A   +LR M    C+                     
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQ--------------------- 205

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P +   ++ ++ L +  QV  A N       H  + P+   +N L
Sbjct: 206 ---------------PDVVVYTSIIDSLCKDRQVTQAFNLFS-EMIHQGISPSIFTYNSL 249

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   C     +    +L EM  S++  PN++ +ST++D LCK G+  EA ++ + M+ K 
Sbjct: 250 IHALCNLCEWKHVTALLNEMVNSKI-MPNVVIFSTVVDALCKEGKVMEAHDVVDMMI-KR 307

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + P+ +TYN L+DG C   ++D A K+ + M   G  P+V +Y+TL+NG+CK  ++++A
Sbjct: 308 GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKA 367

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +F+EM    L P+T+ Y+TL++  C  GR+ +A+ L  EM  RG   D V++ I+L  
Sbjct: 368 MYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDY 427

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC+  +++EA+ +L+ +    +  +   Y IV++  C+ GELE A +L   +  +G  P+
Sbjct: 428 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 487

Query: 449 YATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             T   ++  LC+ G+  +A+  LFG +   G+ P   ++ L+     R  + L   +LL
Sbjct: 488 VWTYTIMINGLCQQGLLAEAS-KLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLL 546

Query: 508 DELVIK 513
            E++ +
Sbjct: 547 QEMLAR 552



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 186/365 (50%), Gaps = 5/365 (1%)

Query: 148 RVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           ++ E+ H    +  E  +P++    T +N L +      A   L+ S +    +P+  ++
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLR-SMEQGNCQPDVVVY 211

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             +I   CK   +  AF +  EM    +S P++ TY++LI  LC    ++    L  EMV
Sbjct: 212 TSIIDSLCKDRQVTQAFNLFSEMIHQGIS-PSIFTYNSLIHALCNLCEWKHVTALLNEMV 270

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +  +I+P+ + ++ ++D  C+ GKV  A  +++ M   G  PNV  Y  LM+G C   ++
Sbjct: 271 NS-KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 329

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA +VFD M      PD + Y+TLIN +C+  R+++A+ L +EM  +    + VT++ +
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC  G++++A+ +  ++   G   +  SY I+L++ C+   L++AI LL+ +     
Sbjct: 390 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P       ++  +C+AG  E A      L   G  P   ++ +++  +C+   L  A +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 509

Query: 506 LLDEL 510
           L  E+
Sbjct: 510 LFGEM 514



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 183/372 (49%), Gaps = 16/372 (4%)

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--HLRLKPNTCIFNILI 209
           M H +HP     PS+   +    LLI   ++      L  S+Q     + PN    NILI
Sbjct: 59  MLH-MHP----PPSIADFT---KLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 110

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C    L  AF VL ++ K     PN+ T++TLI GLC  G+  E + LF++M+  + 
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGHQ-PNIATFNTLIRGLCVEGKIGEVLHLFDKMIG-EG 168

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ +TY  LI+G C+ G    A +++  M+   C P+V  YT++++  CK+ ++ +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +F EM +  + P    Y +LI+  C          LL EM       ++V F+ ++  L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+EGK+ EA  +++ +   G+  N  +Y  +++  C + E+++A+++   M+C+GF P  
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            + + L+   CK    E A      +      P + +++ L+  +C   +L  A  L  E
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 510 LVIKESGTIQVP 521
           +V +     Q+P
Sbjct: 409 MVTRG----QIP 416



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 125/292 (42%), Gaps = 40/292 (13%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+T+   KGF  +  +Y+T+++   + ++ E    +  +M  +    +   +  LM
Sbjct: 332 AVKVFDTMV-CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 390

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               +    +  + +FH++  +TR +                       +F+ Y      
Sbjct: 391 HGLCHVGRLQDAIALFHEM--VTRGQ---------------------IPDFVSYC----- 422

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
                    IL+ + CK   L+ A  +LK ++ S M  P++  Y+ +IDG+C+ G    A
Sbjct: 423 ---------ILLDYLCKNRRLDEAIALLKAIEGSNMD-PDIQIYTIVIDGMCRAGELEAA 472

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF  + SK  + P+  TY ++I+G C+ G +  A K+   MK  G +PN   Y  +  
Sbjct: 473 RDLFSNLSSKG-LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITR 531

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           GF +  +     ++  EM       D    T L+      G      ++L E
Sbjct: 532 GFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 2/188 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F+ M +    P    +T L+    +       L L  +M   G   +I T NI
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   ++  A  +L K+   G   N A++  ++   C +G++ + + L   M+  G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLFA 503
           F P+  T   L+  LCK G +  AAI L   +E G  +P+   +  +++ +C+ R++  A
Sbjct: 169 FQPNVVTYGTLINGLCKVG-STSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227

Query: 504 FELLDELV 511
           F L  E++
Sbjct: 228 FNLFSEMI 235


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 171/296 (57%), Gaps = 2/296 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ P+   ++ LI   C  G L+ A ++   M    ++ PN+ T+S LIDG CK G+ RE
Sbjct: 228 RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNIN-PNVYTFSILIDGFCKEGKVRE 286

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +   M+ K+  L D +TYN L+DG+C   +V++AK +   M   G  P+V++Y+ ++
Sbjct: 287 AKNVLAVMMKKNVKL-DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMI 345

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NGFCK   + EA ++F+EM    + P+ + Y +L++  C++GR   ALEL+ EM +RG  
Sbjct: 346 NGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQP 405

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           ++I+T+N IL  +C+   +++A+ +L K+   GI  +  +Y +++N  C+ G L+ A ++
Sbjct: 406 SNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKV 465

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
              +L +G+ P+  T   L+   C  G  ++    L  + + G  P + ++ +L+ 
Sbjct: 466 FEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 182/309 (58%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI   C+ G  ++A ++L+ +   ++  PN++ YST+ID +CK+    +A +L+ EM
Sbjct: 166 YGTLINGLCRVGETKAAVQLLRRVD-GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEM 224

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSK +I PD +TY+ LI GFC  GK+  A  +   M ++  NPNV+ ++ L++GFCKEGK
Sbjct: 225 VSK-RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++EAK V   M    +K D + Y +L++ +C   +V++A  L   M +RG   D+ +++I
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+   ++EA+ + E++    I+ N  +Y  +++  C+ G    A+EL+  M  RG
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
              +  T N +L  +CK    + A + L  + E G +P+  ++ +L+  +C+  +L  A 
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463

Query: 505 ELLDELVIK 513
           ++ ++L++K
Sbjct: 464 KVFEDLLVK 472



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 199/387 (51%), Gaps = 10/387 (2%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E   AL   + V  Q GF  +  +Y T+++ L R  + +A   +LR++  +  + +  ++
Sbjct: 143 EVHKALYFHDKVVAQ-GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMY 201

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             ++       L     +++ ++    R  P +   S+ ++      ++  A +     N
Sbjct: 202 STIIDSMCKDKLVNDAFDLYCEMVS-KRISPDVVTYSSLISGFCVVGKLKYAVDLF---N 257

Query: 194 QHL--RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           + +   + PN   F+ILI   CK G +  A  VL  M K  +   +++TY++L+DG C  
Sbjct: 258 RMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKL-DVVTYNSLMDGYCLV 316

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +  +A  LF  M  +  + PD  +Y+++I+GFC+   VD A K+ E M      PNV  
Sbjct: 317 KQVNKAKSLFNVMAQRG-VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y +L++G CK G+   A E+ DEM +     + I Y ++++  C+   VD+A+ LL ++K
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+G + DI T+ +++ GLC+ G++++A  + E L   G   N  +Y  ++N  C KG  +
Sbjct: 436 EKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFD 495

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVR 458
           + + +L  M   G +P+ A + E+L+ 
Sbjct: 496 EGLAMLSKMKDNGCIPN-AITYEILIH 521



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 158/296 (53%), Gaps = 2/296 (0%)

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           ++A  + ++M+ + +  P+ IT + L++   + G  + +  +F +++ K    PDA+T+ 
Sbjct: 75  QTALSLSQQMEFNGIK-PDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGY-HPDAVTFT 132

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           +LI G C  G+V +A    + +   G   +  +Y TL+NG C+ G+ + A ++   +   
Sbjct: 133 ILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGK 192

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
           L++P+ + Y+T+I+  C+   V++A +L  EM  +    D+VT++ ++ G C  GK++ A
Sbjct: 193 LVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYA 252

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           + +  ++  D I  N  ++ I+++  C++G++ +A  +L +M+ +       T N L+  
Sbjct: 253 VDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDG 312

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            C       A      + + G  P+  S+++++   C+ + +  A +L +E+  K+
Sbjct: 313 YCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ 368



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 1/211 (0%)

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           KNN   P +  +  ++    K  + Q A  +  +M+   +KPD I    L+NCF + G +
Sbjct: 51  KNNPIPPAI-EFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHI 109

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
             +  +  ++ ++G   D VTF I++ GLC +G++ +AL   +K+   G  L++ SY  +
Sbjct: 110 KFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTL 169

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +N  C+ GE + A++LLR +  +   P+    + ++  +CK  +  DA      +V    
Sbjct: 170 INGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRI 229

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELV 511
            P+  +++ L+   C   KL +A +L + ++
Sbjct: 230 SPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 112/241 (46%)

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF  ++ K+  +P A+ +  ++    +  +   A  + + M+ NG  P+      LMN F
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            + G ++ +  VF ++      PD + +T LI   C  G V +AL    ++  +G + D 
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++  ++ GLCR G+ + A+ +L ++    +  N   Y  +++  C+   +  A +L   
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +   P   T + L+   C  G  + A      ++     P   ++++L++  C+  K
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 500 L 500
           +
Sbjct: 284 V 284


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 181/317 (57%), Gaps = 6/317 (1%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI+  CK G    A  ++ E+ +   + P++ITY+ LI G+C  GR+ +A +L  +MV +
Sbjct: 125 LIRGFCKIGKTRKATRIM-EIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRR 183

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               P  +T+N+LI+  CR G + RA  ++E M  +GC PN  +Y  L++GFCKE K++ 
Sbjct: 184 G-CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMER 242

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A E   +M +    PD + Y TL+   C+ G+VD A+ELL ++  +GC   ++T+N ++ 
Sbjct: 243 AIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVID 302

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + GK ++A  +L+++   G+  +  +Y  ++    ++G++++AI+    +   G  P
Sbjct: 303 GLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKP 362

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T N +++ LCKA   + A   L  +V+ G KP   S+ +L+E +        A ELL
Sbjct: 363 NAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELL 422

Query: 508 DEL----VIKESGTIQV 520
           +EL    V+K+S   +V
Sbjct: 423 NELCLRGVVKKSSAEKV 439



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 158/269 (58%), Gaps = 2/269 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+LI   C  G    A ++L +M +   S P+++T++ LI+ LC+ G    AI+
Sbjct: 152 PDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCS-PSVVTFNILINFLCRKGLLGRAID 210

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + E+M  K    P++L+YN L+ GFC+  K++RA + +  M + GC P++  Y TL+   
Sbjct: 211 VLEKM-PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTAL 269

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+GK+  A E+ +++ +    P  I Y T+I+   + G+ D+A +LL EM+ +G K DI
Sbjct: 270 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDI 329

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T++ ++GGL REGK++EA+     L   G+  N  +Y  ++   C+  + ++AI+ L  
Sbjct: 330 ITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAY 389

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           M+ RG  P  A+   L+  L   G+A++A
Sbjct: 390 MVQRGCKPTEASYTILIEGLAYEGLAKEA 418



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 142/265 (53%), Gaps = 1/265 (0%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L +NG   E     E MV +  I PD +    LI GFC+ GK  +A +IME ++++G  P
Sbjct: 94  LVRNGELEEGFRFLESMVYRGDI-PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVP 152

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V  Y  L++G C  G+  +A+++  +M      P  + +  LIN  CR G +  A+++L
Sbjct: 153 DVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVL 212

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           ++M + GC  + +++N +L G C+E K+E A+  L K+   G Y +  +Y  +L   C+ 
Sbjct: 213 EKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKD 272

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G+++ A+ELL  +  +G  P   T N ++  L K G  + AA  L  +   G KP+  ++
Sbjct: 273 GKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITY 332

Query: 488 ALLVELICRGRKLLFAFELLDELVI 512
           + LV  + R  K+  A +   +L +
Sbjct: 333 SSLVGGLSREGKVDEAIKFFHDLEV 357



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 124/230 (53%)

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             R G+++   + +E M   G  P++   T+L+ GFCK GK ++A  + + +++    PD
Sbjct: 94  LVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPD 153

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y  LI+  C  GR  +A +LL +M  RGC   +VTFNI++  LCR+G +  A+ +LE
Sbjct: 154 VITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLE 213

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+   G   N  SY  +L+  C++ ++E+AIE L  M  RG  P   T N LL  LCK G
Sbjct: 214 KMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDG 273

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             + A   L  L   G  P   ++  +++ + +  K   A +LLDE+  K
Sbjct: 274 KVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK 323



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 4/193 (2%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           EK+ + A+E    ++  +G   +  TY T+L  L +  K +A   +L Q++ + C     
Sbjct: 237 EKKMERAIEYLGKMT-SRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLI 295

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            +  ++   S     ++  ++  ++      KP +   S+ +  L    +VD A  F  +
Sbjct: 296 TYNTVIDGLSKVGKTDQAAKLLDEMRA-KGLKPDIITYSSLVGGLSREGKVDEAIKFF-H 353

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             + L +KPN   +N ++   CK    + A + L  M + +   P   +Y+ LI+GL   
Sbjct: 354 DLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQ-RGCKPTEASYTILIEGLAYE 412

Query: 252 GRFREAIELFEEM 264
           G  +EA+EL  E+
Sbjct: 413 GLAKEALELLNEL 425



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 59/125 (47%)

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L  L R G++EE    LE + Y G   +      ++   C+ G+  KA  ++ ++   G 
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           +P   T N L+  +C  G   DA   L  +V  G  P   ++ +L+  +CR   L  A +
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 506 LLDEL 510
           +L+++
Sbjct: 211 VLEKM 215


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 237/518 (45%), Gaps = 73/518 (14%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++++ + + + AL  F     Q  + H+   Y  +L+ L++ K  +    VLR M     
Sbjct: 106 AVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRI 165

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
           +     F  +M  +S        +     +     E P L   +T +++L+  N++D A 
Sbjct: 166 ERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIE-PDLSICNTAIHVLVMGNRLDKAV 224

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            FL+   Q + + PN   +N LIK +C    LE A E++ EM     S P+ I+Y T++ 
Sbjct: 225 RFLE-RMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCS-PDKISYYTVMG 282

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNV--------------------------- 279
            LCK  R +E   L E+M+    +LPD +TYN                            
Sbjct: 283 FLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFR 342

Query: 280 --------LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
                   ++  FCR G++D+AK+I+  M + GC P+V  YT+++NG C+E K+ +AK++
Sbjct: 343 VDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKM 402

Query: 332 FDEMKNFLLKPDTIGYTTLINCFC-----------------------------------R 356
             +M     KP+T+ YT L+N  C                                   R
Sbjct: 403 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRR 462

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G+  EA +L++EM ++G     V  N+++  LC+E K++EA   +E+   +G  +N  +
Sbjct: 463 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVN 522

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           +  V++  CQK +LE A+ LL  M      P   T   ++  L K G  E+A      ++
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 582

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            +G+ P   ++  ++   CR  ++    +LL++++ ++
Sbjct: 583 RVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ 620



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 190/424 (44%), Gaps = 81/424 (19%)

Query: 143 CSLH--ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD----LAQNFLKYSNQHL 196
           C LH  E   E+  ++ P     P   +  T +  L +  ++     L +  LK SN   
Sbjct: 250 CDLHRLEDAXELIAEM-PFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSN--- 305

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            L P+   +N  +    K G  + A E L+E ++ +    + + YS ++   C+ GR  +
Sbjct: 306 -LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV-DKVGYSAIVHSFCREGRMDK 363

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A E+  EM SK  I PD +TY  +I+G C+  KVD+AKK++  M  +GC PN  +YT L+
Sbjct: 364 AKEIVNEMFSKGCI-PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 422

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER--- 373
           NG CK G   EA+E+ +  +     P+ I Y+ L++ F R G+  EA +L++EM ++   
Sbjct: 423 NGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFF 482

Query: 374 --------------------------------GCKADIVTFNIILGGLCREGKIEEALGM 401
                                           GC  ++V F  ++ G C++  +E AL +
Sbjct: 483 PTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSL 542

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS--------- 452
           L+ ++    + +  +Y  +++   +KG +E+A +L   ML  G++P   T          
Sbjct: 543 LDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCR 602

Query: 453 ------------------------NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
                                   N+++ +LC  G  E A   L  ++    K ++++  
Sbjct: 603 MGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH 662

Query: 489 LLVE 492
           +L+E
Sbjct: 663 MLIE 666



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 42/352 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   ++ +N L +  +VD A+  L+   +H   KPNT  +  L+   CK G    A E
Sbjct: 378 PDVVTYTSVINGLCQERKVDQAKKMLRQMYKH-GCKPNTVSYTALLNGLCKNGNSLEARE 436

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++  M +     PN ITYS L+ G  + G+  EA +L  EM+ K    P  +  N+LI  
Sbjct: 437 MMN-MSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG-FFPTPVEINLLIQS 494

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  KVD AK+ ME   NNGC  NV N+TT+++GFC++  L+ A  + D+M      PD
Sbjct: 495 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 554

Query: 344 TIGYTTLINC-----------------------------------FCRAGRVDEALELLK 368
            + YTT+I+                                    +CR GRV++ L+LL+
Sbjct: 555 VVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLE 614

Query: 369 EMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           +M  R  C+     +N ++  LC  G +E+A  +L K+      ++  +  +++     K
Sbjct: 615 KMLSRQECRT---AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSK 671

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           G    +  +   M  R  +P      ++  +L   G +E+A   +   VE G
Sbjct: 672 GIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 723



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 13/193 (6%)

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           SN+H    P+   +  +I    K+G +E A ++  +M +     P  +TY T+I   C+ 
Sbjct: 549 SNKH----PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGW-IPTPVTYRTVIHQYCRM 603

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  + ++L E+M+S+ +       YN +I+  C  G +++A K++  +       +   
Sbjct: 604 GRVEDLLKLLEKMLSRQEC---RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANT 660

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
              L+  +  +G    +  V   M N  L PD      +       G+ +EA +L+    
Sbjct: 661 CHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFV 720

Query: 372 ERG-----CKADI 379
           ERG     C+ D+
Sbjct: 721 ERGRISPQCQLDL 733


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 171/299 (57%), Gaps = 5/299 (1%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           TC  NI I+  C+ G LE A  +++ M       P+++TY+TL+ GLCK+ + +EA +  
Sbjct: 248 TC--NIWIRGLCEDGRLEEAVALVERM--GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYL 303

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
             M+++  I PD  TYN +IDG+C+ G +  A ++++     G  P+   Y +L+NG C 
Sbjct: 304 GRMMNQGCI-PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCA 362

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           EG ++ A E+F+E +   LKPD + Y +L+   CR G +  AL+++ EM E GC  DI T
Sbjct: 363 EGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWT 422

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +NII+ GLC+ G I +A  ++      G   +  ++  +++  C++ +L+ A++L+  M 
Sbjct: 423 YNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMW 482

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             G  P   T N +L  LCKAG A++       ++  G +P + ++ +L+E  C+  +L
Sbjct: 483 TYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQL 541



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 175/317 (55%), Gaps = 9/317 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FN ++   C++G +  +  +L ++ K  MS  N  T +  I GLC++GR  EA+ 
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMS-ANKFTCNIWIRGLCEDGRLEEAVA 267

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L E M +   + PD +TYN L+ G C+  KV  A + +  M N GC P+ F Y T+++G+
Sbjct: 268 LVERMGA--YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY 325

Query: 320 CKEGKLQEAKEVFDE--MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           CK G LQEA E+  +   K F+  PD + Y +LIN  C  G ++ ALEL  E + +  K 
Sbjct: 326 CKSGMLQEATELLKDAVFKGFV--PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKP 383

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V +N ++ GLCR+G I  AL ++ ++  +G + +  +Y I++N  C+ G +  A  ++
Sbjct: 384 DLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVM 443

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICR 496
              + +G+LP   T N L+   CK  +  D+A+ L   +   G  P+  ++  ++  +C+
Sbjct: 444 NDAIVKGYLPDVFTFNTLIDGYCKR-LKLDSALQLVERMWTYGIAPDVITYNSVLNGLCK 502

Query: 497 GRKLLFAFELLDELVIK 513
             K     E  +E+++K
Sbjct: 503 AGKAKEVNETFEEMILK 519



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 205/415 (49%), Gaps = 4/415 (0%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  L +  K +     L +M  + C   +  +  ++  +    + +   E+  K 
Sbjct: 282 TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELL-KD 340

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P      + +N L     ++ A      + Q   LKP+  ++N L+K  C++G
Sbjct: 341 AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA-QAKDLKPDLVVYNSLVKGLCRQG 399

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            +  A +V+ EM + +  +P++ TY+ +I+GLCK G   +A  +  + + K   LPD  T
Sbjct: 400 LILHALQVMNEMVE-EGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY-LPDVFT 457

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           +N LIDG+C+  K+D A +++E M   G  P+V  Y +++NG CK GK +E  E F+EM 
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +P+ I Y  LI  FC+  +++EA  ++  M + G   D V+FN ++ G CR G ++
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLD 577

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A  + +KL   G      ++ I++     K  ++ A ++   M+ +G+ P   T   L+
Sbjct: 578 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILV 637

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LCKA   + A   L  ++  GF P   ++  ++ L+    ++  A  ++  +V
Sbjct: 638 DGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMV 692



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 205/434 (47%), Gaps = 23/434 (5%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           ++ TY TI+D   +    +    +L+   ++        + +L+         ER LE+F
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKH 211
           ++       KP L   ++ +  L       L  + L+  N+ +     P+   +NI+I  
Sbjct: 374 NEAQA-KDLKPDLVVYNSLVKGLCRQG---LILHALQVMNEMVEEGCHPDIWTYNIIING 429

Query: 212 HCKRGTLESAFEVLKE-MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            CK G +  A  V+ + + K  +  P++ T++TLIDG CK  +   A++L E M +   I
Sbjct: 430 LCKMGNISDAAVVMNDAIVKGYL--PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG-I 486

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PD +TYN +++G C+ GK     +  E M   GC PN   Y  L+  FCK  +L+EA  
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 546

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           V   M    L PD + + TLI+ FCR G +D A  L +++ E+G  A   TFNI++G   
Sbjct: 547 VIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 606

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
            +  ++ A  +  ++   G   +  +YRI+++  C+   +++A   L  M+ +GF+P  A
Sbjct: 607 SKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMA 666

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE-------------SDSWALLVELICRG 497
           T   +L  L       +A   +  +V MG  PE             +    L+ EL+ +G
Sbjct: 667 TFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKG 726

Query: 498 RKLLFAFELLDELV 511
                A+E+L E V
Sbjct: 727 HISYRAYEVLHEGV 740



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 172/352 (48%), Gaps = 7/352 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           ++ A    +  L+ + ++D     L  +  HL       ++   I+ + + G L +A + 
Sbjct: 34  TIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDA 93

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
            + M       P    Y+ ++D L       +A +++  M++   + PDA T+ V +  F
Sbjct: 94  FERMDLFACP-PAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAG-VAPDARTHTVRLKSF 151

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C  G+   A +++  +   GC+     Y T++ G    G    A+ +FDEM    + PD 
Sbjct: 152 CLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDV 211

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             +  +++  C+ G V E+  LL ++ +RG  A+  T NI + GLC +G++EEA+ ++E+
Sbjct: 212 ATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVER 271

Query: 405 LWYDGIYL--NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +   G Y+  +  +Y  ++   C+  ++++A + L  M+ +G +P   T N ++   CK+
Sbjct: 272 M---GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           GM ++A   L   V  GF P+  ++  L+  +C    +  A EL +E   K+
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 235/474 (49%), Gaps = 28/474 (5%)

Query: 44  VETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD 103
           VE+S   V A +R   +S  A  S    +   + AL + +++ +Q G +     Y   + 
Sbjct: 57  VESSIITVLAMQRWETLSQMAYKSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYCMAVH 116

Query: 104 KLARYKKFEAVDAVLRQM--TYETCKFHEGIFLNLMKHFSNCSLHE-------------- 147
            L + +      +VLR +  T  +C     IF +L++  S C                  
Sbjct: 117 ILVQAQMPSQAMSVLRHLALTGFSC---SAIFSSLLRTISRCDPTNLFSVDLLVNAYVKE 173

Query: 148 -RVLEMFHKIHPITR--EKPSLKAISTCLNLLIESNQVDLAQNFLKYS-NQHLRLKPNTC 203
            +VL+    I  +     K SL + +  LN L+  N+ +    FLK S ++   L   TC
Sbjct: 174 GKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTC 233

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
             NI++   C +G L  A  +L++MK  ++  PN +TY+T+++   K GR + A+ + ++
Sbjct: 234 --NIVLNSLCTQGKLSKAESMLQKMKNCRL--PNAVTYNTILNWYVKKGRCKSALRILDD 289

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  K+ I  D  TYN++ID  C+  +  RA  +++ M+     P+  +Y TL++GF  EG
Sbjct: 290 M-EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEG 348

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K+  A  +F++M    LKP    YT LI+ +CR GR DEA  +L EM+  G +   +T++
Sbjct: 349 KINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYS 408

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            +L G C+  K+  AL +++ L    I +N+  Y I+++  CQ GE+ KA ++L+ ML  
Sbjct: 409 ALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLAD 468

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           G  P   T + L+  +CK GM  +    L  + + G  P +  +  LV   C+ 
Sbjct: 469 GIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 522



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 174/323 (53%), Gaps = 4/323 (1%)

Query: 193 NQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           NQ LR  LKP+   +  LI  +C+ G  + A  VL EM+ + +  P+ +TYS L++G CK
Sbjct: 358 NQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVR-PSELTYSALLNGYCK 416

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           + +   A++L + + S+  I  +   Y +LIDGFC+ G+V +AK+I++ M  +G +P+V 
Sbjct: 417 HSKLGPALDLIKYLRSR-SISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVI 475

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y+ L+NG CK G + E KE+   M+   + P+ + YTTL+  FC+AG   EAL+   ++
Sbjct: 476 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI 535

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
              G  A+ V  N +L    REG I EA    + +    I  + AS+  +++  CQ+G +
Sbjct: 536 YRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNV 595

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            +A  +   M+  G+ P   T   LL  LC+ G    A   +  L+E     +  +   L
Sbjct: 596 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 655

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           +  IC+   L  A +L +++V +
Sbjct: 656 LVGICKHGTLDEALDLCEKMVTR 678



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 222/455 (48%), Gaps = 31/455 (6%)

Query: 73  KEPQC--ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYET 125
           K+ +C  AL I + + E+ G   +  TY  ++DKL + K+      +L++M     T + 
Sbjct: 276 KKGRCKSALRILDDM-EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334

Query: 126 CKFH---EGIF----LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           C ++    G F    +NL  +  N  L + +             KPS+   +  ++    
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSL-------------KPSVATYTALIDGYCR 381

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           + + D A+  L Y  Q   ++P+   ++ L+  +CK   L  A +++K ++   +S  N 
Sbjct: 382 NGRTDEARRVL-YEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISI-NR 439

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
             Y+ LIDG C+ G   +A ++ + M++ D I PD +TY+ LI+G C+ G +   K+I+ 
Sbjct: 440 TMYTILIDGFCQLGEVSKAKQILKCMLA-DGIDPDVITYSALINGMCKMGMIHETKEILS 498

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M+ +G  PN   YTTL+  FCK G  +EA + F ++    L  +++ +  L+  F R G
Sbjct: 499 RMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREG 558

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            + EA +  + M       D+ +FN I+   C+ G + EA  + + +   G   +  +Y 
Sbjct: 559 MIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYG 618

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +L   CQ G L +A E +  +L +       T N LLV +CK G  ++A      +V  
Sbjct: 619 SLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR 678

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              P++ ++ +L++  C+  K++ A  LL  ++ K
Sbjct: 679 NILPDTYTYTILLDGFCKRGKVVPALILLQMMLEK 713



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 166/303 (54%), Gaps = 7/303 (2%)

Query: 169 ISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           ++TC   LN L    ++  A++ L+   ++ RL PN   +N ++  + K+G  +SA  +L
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQ-KMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
            +M+K+ +   +L TY+ +ID LCK  R   A  L + M  +  + PD  +YN LI GF 
Sbjct: 288 DDMEKNGIE-ADLYTYNIMIDKLCKLKRSARAYLLLKRM-REVNLTPDECSYNTLIHGFF 345

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
             GK++ A  I   M      P+V  YT L++G+C+ G+  EA+ V  EM+   ++P  +
Sbjct: 346 GEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSEL 405

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y+ L+N +C+  ++  AL+L+K ++ R    +   + I++ G C+ G++ +A  +L+ +
Sbjct: 406 TYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCM 465

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
             DGI  +  +Y  ++N  C+ G + +  E+L  M   G LP+      L+   CKAG A
Sbjct: 466 LADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHA 525

Query: 466 EDA 468
           ++A
Sbjct: 526 KEA 528



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 173/332 (52%), Gaps = 5/332 (1%)

Query: 185 AQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           A+  LKY     R  L  N+ I N L+    + G +  A +  + M + ++S+ ++ +++
Sbjct: 525 AKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISF-DVASFN 583

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            +ID  C+ G   EA  +++ MV +    PD  TY  L+ G C+GG + +AK+ M ++  
Sbjct: 584 CIIDSYCQRGNVLEAFSVYDNMV-RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
             C  +     TL+ G CK G L EA ++ ++M    + PDT  YT L++ FC+ G+V  
Sbjct: 643 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVP 702

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW-YDGIYLNKASYRIVL 421
           AL LL+ M E+G   D + +  +L GL  EG+++ A  M +++   +G+Y +  +Y  ++
Sbjct: 703 ALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMM 762

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N   + G++ +   L+R M      P  A+ N L+    K G           +V+ G K
Sbjct: 763 NGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIK 822

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P++ ++ LL+  +C    +  A + L+++V++
Sbjct: 823 PDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 854



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 154/308 (50%), Gaps = 22/308 (7%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  + IL+   CKRG +  A  +L+ M +  +  P+ I Y+ L++GL   G+ + A  
Sbjct: 682 PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGL-VPDTIAYTCLLNGLVNEGQVKAASY 740

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+E++ K+ +  D + YN +++G+ +GG+++  +++M  M  N   P+  +Y  LM+G+
Sbjct: 741 MFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGY 800

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K+G+L     ++ +M    +KPD + Y  LI   C  G ++ A++ L++M   G   D 
Sbjct: 801 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 860

Query: 380 VTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + F+I++     + K+  AL +   + W                     G+++ A EL  
Sbjct: 861 LAFDILIKAFSEKSKMSNALQLFSYMKWV--------------------GDIDGAFELKE 900

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M   G +P     + ++  LCK G  E+A I    ++  G  P   ++  L+  +C+  
Sbjct: 901 DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 960

Query: 499 KLLFAFEL 506
           K+  AF L
Sbjct: 961 KIDDAFHL 968



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 158/308 (51%), Gaps = 19/308 (6%)

Query: 168  AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            A ++ +N  ++  Q++  +  ++  +++  + P++  +NIL+  + K+G L     + ++
Sbjct: 757  AYNSMMNGYLKGGQINEIERLMRNMHEN-EVYPSSASYNILMHGYIKKGQLSRTLYLYRD 815

Query: 228  MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
            M K  +  P+ +TY  LI GLC+ G    A++  E+MV  + + PD L +++LI  F   
Sbjct: 816  MVKEGIK-PDNVTYRLLIFGLCEYGLIEIAVKFLEKMV-LEGVFPDNLAFDILIKAFSEK 873

Query: 288  ----------------GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
                            G +D A ++ E MK  G  P+    ++++ G CK GK++EA  V
Sbjct: 874  SKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIV 933

Query: 332  FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            F  +    + P    +TTL++  C+  ++D+A  L + M+  G K D+VT+N+++ GLC 
Sbjct: 934  FSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCN 993

Query: 392  EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            +  I +AL + E++   G+  N  +Y  +       G ++   +LL+ +  RG +P Y  
Sbjct: 994  KKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKH 1053

Query: 452  SNELLVRL 459
               L  R+
Sbjct: 1054 PESLEWRM 1061



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 161/347 (46%), Gaps = 23/347 (6%)

Query: 164  PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
            P   A +  LN L+   QV  A    +       L  +   +N ++  + K G +     
Sbjct: 717  PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIER 776

Query: 224  VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            +++ M ++++ YP+  +Y+ L+ G  K G+    + L+ +MV K+ I PD +TY +LI G
Sbjct: 777  LMRNMHENEV-YPSSASYNILMHGYIKKGQLSRTLYLYRDMV-KEGIKPDNVTYRLLIFG 834

Query: 284  FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF----------- 332
             C  G ++ A K +E M   G  P+   +  L+  F ++ K+  A ++F           
Sbjct: 835  LCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDG 894

Query: 333  -----DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
                 ++MK   + P  +  ++++   C+ G+V+EA+ +   +   G    I TF  ++ 
Sbjct: 895  AFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMH 954

Query: 388  GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            GLC+E KI++A  + + +   G+ ++  +Y +++   C K  +  A++L   M  +G LP
Sbjct: 955  GLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLP 1014

Query: 448  HYATSNELLVRLCKAGMAEDAAIALFGLVEMGF-----KPESDSWAL 489
            +  T   L   +   G  +D    L  + + G       PES  W +
Sbjct: 1015 NITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLEWRM 1061



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 139/280 (49%), Gaps = 14/280 (5%)

Query: 237 NLITYSTLIDGLCKNGRFREA---IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           NL +   L++   K G+  +A   I   +E   K  +       N L+        ++++
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVG-------INKS 211

Query: 294 KKIMEFMKNNGCNPNVFNYTT---LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           + +  F+K +       + TT   ++N  C +GKL +A+ +  +MKN  L P+ + Y T+
Sbjct: 212 EYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTI 270

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +N + + GR   AL +L +M++ G +AD+ T+NI++  LC+  +   A  +L+++    +
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             ++ SY  +++    +G++  AI +   ML +   P  AT   L+   C+ G  ++A  
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARR 390

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            L+ +   G +P   +++ L+   C+  KL  A +L+  L
Sbjct: 391 VLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYL 430


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 170/313 (54%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  +   +  +I   C+   LE A ++L+EM   ++   + +TY+ LIDG CK G+  EA
Sbjct: 392 LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDV-DEVTYTVLIDGYCKRGKMAEA 450

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++   MV +  + P+ +TY  L DG C+ G V  A +++  M N G   N   Y +L+N
Sbjct: 451 FQMHNAMVQRG-VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 509

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G L++A     +M    LKPD   YTTLI+  C++G +D A  LL+EM ++G K 
Sbjct: 510 GLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKP 569

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            IVT+N+++ G C  G++E    +L+ +    I+ N A+Y  ++   C +  ++   E+ 
Sbjct: 570 TIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIY 629

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M  R   P+  T N L+   CKA   ++A      +++ GF+  + S++ L+ L+ + 
Sbjct: 630 KGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKK 689

Query: 498 RKLLFAFELLDEL 510
           +K + A EL  ++
Sbjct: 690 KKFVEARELFHDM 702



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 168/313 (53%), Gaps = 5/313 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N C +NIL+K  C  G ++ A ++  EM     S P+++TY  LI G C  G    A++L
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMA----SAPDVVTYGILIHGHCALGELENAVKL 313

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EMV+   + P+A  Y  ++   C  G +  A +++E M       +   YTT+++GFC
Sbjct: 314 LDEMVAGG-VEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFC 372

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +G L  A+  FDEM+   L  D + YTT+IN  CRA  ++EA +LL+EM  R    D V
Sbjct: 373 NKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEV 432

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+ +++ G C+ GK+ EA  M   +   G+  N  +Y  + +  C++G+++ A ELL  M
Sbjct: 433 TYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEM 492

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +  T N L+  LCKAG  E A   +  +     KP+  ++  L++ +C+   L
Sbjct: 493 SNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDL 552

Query: 501 LFAFELLDELVIK 513
             A  LL E++ K
Sbjct: 553 DRAHSLLQEMLDK 565



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 171/314 (54%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + ILI  HC  G LE+A ++L EM    +  PN   Y++++  LC  G   +A+ 
Sbjct: 289 PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVE-PNATVYTSVVALLCDKGWISDALR 347

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + E+MV +  IL +AL Y  ++ GFC  G +  A++  + M+  G   +   YTT++NG 
Sbjct: 348 VVEDMVQRKVILDEAL-YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGL 406

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+  +L+EA+++  EM    L  D + YT LI+ +C+ G++ EA ++   M +RG   ++
Sbjct: 407 CRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNV 466

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+  +  GLC++G ++ A  +L ++   G+ LN  +Y  ++N  C+ G LE+A+  +  
Sbjct: 467 VTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMAD 526

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M      P   T   L+  LCK+G  + A   L  +++ G KP   ++ +L+   C   +
Sbjct: 527 MDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 586

Query: 500 LLFAFELLDELVIK 513
           +    +LLD ++ K
Sbjct: 587 VEGGKKLLDWMLEK 600



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 175/343 (51%), Gaps = 5/343 (1%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +T +N L  + +++ A+  L+      RL  +   + +LI  +CKRG +  AF++   M 
Sbjct: 400 TTMINGLCRAVELEEAEKLLQ-EMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           +  ++ PN++TY+ L DGLCK G  + A EL  EM +K   L +A TYN LI+G C+ G 
Sbjct: 459 QRGVT-PNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL-NACTYNSLINGLCKAGY 516

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +++A + M  M      P+V+ YTTL++  CK G L  A  +  EM +  +KP  + Y  
Sbjct: 517 LEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNV 576

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           L+N FC +GRV+   +LL  M E+    +  T+N ++   C E  ++    + + +    
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N+ +Y I++   C+   +++A+     M+ +GF    ATS   L+RL         A
Sbjct: 637 VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRL-TATSYSALIRLLNKKKKFVEA 695

Query: 470 IALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LF  + + G   ESD +   ++L      L     L DELV
Sbjct: 696 RELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELV 738



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 173/352 (49%), Gaps = 8/352 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++KG   +  TY T+++ L R  + E  + +L++M        E  +  L+  +      
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCI 204
               +M + +  + R   P++   +   + L +   V  A   L + SN+ L L  N C 
Sbjct: 448 AEAFQMHNAM--VQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL--NACT 503

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   CK G LE A   + +M  + +  P++ TY+TLID LCK+G    A  L +EM
Sbjct: 504 YNSLINGLCKAGYLEQAMRTMADMDTACLK-PDVYTYTTLIDALCKSGDLDRAHSLLQEM 562

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K  I P  +TYNVL++GFC  G+V+  KK++++M     +PN   Y +LM  +C E  
Sbjct: 563 LDKG-IKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENN 621

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++   E++  M++  + P+   Y  LI   C+A  + EAL    EM ++G +    +++ 
Sbjct: 622 MKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSA 681

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           ++  L ++ K  EA  +   +  +G+      Y   ++ +  +  LE  + L
Sbjct: 682 LIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLAL 733



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 130/255 (50%), Gaps = 8/255 (3%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EAIELF+E+  K+       +YN+L+   C  G+V  A+++ + M +    P+V  Y  L
Sbjct: 246 EAIELFQELPHKN-----VCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGIL 297

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G C  G+L+ A ++ DEM    ++P+   YT+++   C  G + +AL ++++M +R  
Sbjct: 298 IHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKV 357

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D   +  +L G C +G +  A    +++   G+  +  +Y  ++N  C+  ELE+A +
Sbjct: 358 ILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEK 417

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL+ M  R       T   L+   CK G   +A      +V+ G  P   ++  L + +C
Sbjct: 418 LLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLC 477

Query: 496 RGRKLLFAFELLDEL 510
           +   +  A ELL E+
Sbjct: 478 KQGDVQAANELLHEM 492



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 134/295 (45%), Gaps = 5/295 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++ N +  Q+G   N  TY  + D L +    +A + +L +M+ +  + +   + +L+
Sbjct: 450 AFQMHNAMV-QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 508

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    E+ +     +      KP +   +T ++ L +S  +D A + L+       
Sbjct: 509 NGLCKAGYLEQAMRTMADMDTACL-KPDVYTYTTLIDALCKSGDLDRAHSLLQ-EMLDKG 566

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP    +N+L+   C  G +E   ++L  M +  + +PN  TY++L+   C     +  
Sbjct: 567 IKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI-HPNAATYNSLMKQYCIENNMKST 625

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+++ M S+D + P+  TYN+LI G C+   +  A    + M   G      +Y+ L+ 
Sbjct: 626 TEIYKGMRSRD-VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIR 684

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
              K+ K  EA+E+F +M+   L  ++  Y   I+       ++  L L  E+ E
Sbjct: 685 LLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVE 739



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 7/161 (4%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +DEA+EL +E+  +    ++ ++NI+L  LC  G++++A  + +++       +  +Y I
Sbjct: 244 LDEAIELFQELPHK----NVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGI 296

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C  GELE A++LL  M+  G  P+      ++  LC  G   DA   +  +V+  
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
              +   +  ++   C    L+ A    DE+  K   T  V
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV 397


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 212/426 (49%), Gaps = 41/426 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  N  TY T+++ L +     A   +LR M    C+                     
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQ--------------------- 196

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P +   ++ ++ L +  QV  A N       H  + P+   +N L
Sbjct: 197 ---------------PDVVVYTSIIDSLCKDRQVTQAFNLFS-EMIHQGISPSIFTYNSL 240

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   C     +    +L EM  S++  PN++ +ST++D LCK G+  EA ++ + M+ K 
Sbjct: 241 IHALCNLCEWKHVTALLNEMVNSKI-MPNVVIFSTVVDALCKEGKVMEAHDVVDMMI-KR 298

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + P+ +TYN L+DG C   ++D A K+ + M   G  P+V +Y+TL+NG+CK  ++++A
Sbjct: 299 GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKA 358

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +F+EM    L P+T+ Y+TL++  C  GR+ +A+ L  EM  RG   D V++ I+L  
Sbjct: 359 MYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDY 418

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC+  +++EA+ +L+ +    +  +   Y IV++  C+ GELE A +L   +  +G  P+
Sbjct: 419 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 478

Query: 449 YATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             T   ++  LC+ G+  +A+  LFG +   G+ P   ++ L+     R  + L   +LL
Sbjct: 479 VWTYTIMINGLCQQGLLAEAS-KLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLL 537

Query: 508 DELVIK 513
            E++ +
Sbjct: 538 QEMLAR 543



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 186/365 (50%), Gaps = 5/365 (1%)

Query: 148 RVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           ++ E+ H    +  E  +P++    T +N L +      A   L+ S +    +P+  ++
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLR-SMEQGNCQPDVVVY 202

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             +I   CK   +  AF +  EM    +S P++ TY++LI  LC    ++    L  EMV
Sbjct: 203 TSIIDSLCKDRQVTQAFNLFSEMIHQGIS-PSIFTYNSLIHALCNLCEWKHVTALLNEMV 261

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +  +I+P+ + ++ ++D  C+ GKV  A  +++ M   G  PNV  Y  LM+G C   ++
Sbjct: 262 NS-KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 320

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA +VFD M      PD + Y+TLIN +C+  R+++A+ L +EM  +    + VT++ +
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC  G++++A+ +  ++   G   +  SY I+L++ C+   L++AI LL+ +     
Sbjct: 381 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 440

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P       ++  +C+AG  E A      L   G  P   ++ +++  +C+   L  A +
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 500

Query: 506 LLDEL 510
           L  E+
Sbjct: 501 LFGEM 505



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 183/372 (49%), Gaps = 16/372 (4%)

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--HLRLKPNTCIFNILI 209
           M H +HP     PS+   +    LLI   ++      L  S+Q     + PN    NILI
Sbjct: 50  MLH-MHP----PPSIADFT---KLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 101

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C    L  AF VL ++ K     PN+ T++TLI GLC  G+  E + LF++M+  + 
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGHQ-PNIATFNTLIRGLCVEGKIGEVLHLFDKMIG-EG 159

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ +TY  LI+G C+ G    A +++  M+   C P+V  YT++++  CK+ ++ +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +F EM +  + P    Y +LI+  C          LL EM       ++V F+ ++  L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+EGK+ EA  +++ +   G+  N  +Y  +++  C + E+++A+++   M+C+GF P  
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            + + L+   CK    E A      +      P + +++ L+  +C   +L  A  L  E
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 510 LVIKESGTIQVP 521
           +V +     Q+P
Sbjct: 400 MVTRG----QIP 407



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 125/292 (42%), Gaps = 40/292 (13%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+++F+T+   KGF  +  +Y+T+++   + ++ E    +  +M  +    +   +  LM
Sbjct: 323 AVKVFDTMV-CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 381

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               +    +  + +FH++  +TR +                       +F+ Y      
Sbjct: 382 HGLCHVGRLQDAIALFHEM--VTRGQ---------------------IPDFVSYC----- 413

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
                    IL+ + CK   L+ A  +LK ++ S M  P++  Y+ +IDG+C+ G    A
Sbjct: 414 ---------ILLDYLCKNRRLDEAIALLKAIEGSNMD-PDIQIYTIVIDGMCRAGELEAA 463

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF  + SK  + P+  TY ++I+G C+ G +  A K+   MK  G +PN   Y  +  
Sbjct: 464 RDLFSNLSSKG-LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITR 522

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           GF +  +     ++  EM       D    T L+      G      ++L E
Sbjct: 523 GFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 2/188 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F+ M +    P    +T L+    +       L L  +M   G   +I T NI
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   ++  A  +L K+   G   N A++  ++   C +G++ + + L   M+  G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLFA 503
           F P+  T   L+  LCK G +  AAI L   +E G  +P+   +  +++ +C+ R++  A
Sbjct: 160 FQPNVVTYGTLINGLCKVG-STSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218

Query: 504 FELLDELV 511
           F L  E++
Sbjct: 219 FNLFSEMI 226


>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g53330
 gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
 gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 471

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 235/459 (51%), Gaps = 12/459 (2%)

Query: 67  SLIKCEKEPQCALEIFN-----TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           SL++ E +P  A+++F      + + ++ F ++   Y  I+ KL   K F+ +D VL  +
Sbjct: 14  SLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHL 73

Query: 122 TYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
             +T     E IF N++  F    L  R L MF ++ P  R + ++K++++ L+ L++  
Sbjct: 74  KTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEM-PQYRCQRTVKSLNSLLSALLKCG 132

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           +++  +  L   ++    KP+ C +NILI    + G  + A ++  EM K ++  P  +T
Sbjct: 133 ELEKMKERLSSIDEFG--KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVK-PTGVT 189

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           + TLI GLCK+ R +EA+++  +M+    + P    Y  LI   C+ G++  A K+ +  
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
                  +   Y+TL++   K G+  E   + +EM     KPDT+ Y  LIN FC     
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           + A  +L EM E+G K D++++N+ILG   R  K EEA  + E +   G   +  SYRIV
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
            +  C+  + E+A  +L  ML +G+ P        L +LC++G  E  +  +  L   G 
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGI 428

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQ 519
             ++D W++++  +C+   +  + +LL   V KE G + 
Sbjct: 429 AGDADVWSVMIPTMCKEPVISDSIDLLLNTV-KEDGPLS 466


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 181/334 (54%), Gaps = 3/334 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +   +T +N L +  +   A    +   +    +P+   ++ +I   CK   +  A 
Sbjct: 224 QPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA-GCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++   MK   +S PN+ TY++LI GLC   R+REA  +  EM+S + I+P+ +T+++LI+
Sbjct: 283 DIFSYMKAKGIS-PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN-IMPNIVTFSLLIN 340

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            FC+ G V  A+ +++ M   G  PNV  Y++LMNG+  + ++ EA+++FD M     KP
Sbjct: 341 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKP 400

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y  LIN +C+A R+ EA +L  EM  +G   DIV++N ++ GLC+ G++ EA  + 
Sbjct: 401 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 460

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +  +G   +  +Y I+L+  C++G L KA  L R M      P+    N L+  +CK+
Sbjct: 461 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 520

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              ++A      L   G +P    +  ++  +C+
Sbjct: 521 RNLKEARKLFSELFVQGLQPNVQIYTTIINGLCK 554



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 214/441 (48%), Gaps = 42/441 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F+ +   +G+  +  TY TI++ L +  +  A   + R+M    C+          
Sbjct: 211 AVELFDDMVA-RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQ---------- 259

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     P +   ST ++ L +  +V+ A +   Y      
Sbjct: 260 --------------------------PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK-G 292

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +N LI+  C       A  +L EM    +  PN++T+S LI+  CK G   EA
Sbjct: 293 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNI-MPNIVTFSLLINIFCKEGNVFEA 351

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + + M ++  + P+ +TY+ L++G+    +V  A+K+ + M   GC P+VF+Y  L+N
Sbjct: 352 RGVLKTM-TEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILIN 410

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK  ++ EAK++F+EM +  L PD + Y TLI+  C+ GR+ EA +L K M   G   
Sbjct: 411 GYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLP 470

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ T++I+L G C++G + +A  +   +    +  N   Y I+++  C+   L++A +L 
Sbjct: 471 DLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLF 530

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +  +G  P+      ++  LCK G+ ++A  A   + E G  P   S+ +++    + 
Sbjct: 531 SELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQH 590

Query: 498 RKLLFAFELLDELVIKESGTI 518
           +    A +L+ E+  +E G +
Sbjct: 591 KDESRAVQLIGEM--REKGFV 609



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 170/314 (54%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+T   ++LI    +   ++  F VL ++ K  +    ++T++TLI+GLCK G+F +A
Sbjct: 153 LSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQL-TIVTFNTLINGLCKVGKFGQA 211

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +ELF++MV++    PD  TY  +I+G C+ G+   A  +   M   GC P+V  Y+T+++
Sbjct: 212 VELFDDMVARG-YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID 270

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK+ ++ EA ++F  MK   + P+   Y +LI   C   R  EA  +L EM       
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +IVTF++++   C+EG + EA G+L+ +   G+  N  +Y  ++N    + E+ +A +L 
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            +M+ +G  P   + N L+   CKA    +A      ++  G  P+  S+  L++ +C+ 
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450

Query: 498 RKLLFAFELLDELV 511
            +L  A +L   ++
Sbjct: 451 GRLREAHDLFKNML 464



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 140/278 (50%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +I ++ L+  + K   + +A+    + +    + PD  T ++LI+ F +  +VD    
Sbjct: 119 PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   G    +  + TL+NG CK GK  +A E+FD+M     +PD   YTT+IN  C
Sbjct: 179 VLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC 238

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G    A  L ++M E GC+ D+VT++ I+  LC++ ++ EAL +   +   GI  N  
Sbjct: 239 KIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIF 298

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  ++   C      +A  +L  M+    +P+  T + L+   CK G   +A   L  +
Sbjct: 299 TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 358

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            EMG +P   +++ L+       +++ A +L D ++ K
Sbjct: 359 TEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/190 (19%), Positives = 78/190 (41%), Gaps = 36/190 (18%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCRE--------------------------- 392
           +D+AL     M  R  +  I+ FN +L  + +                            
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 393 ---------GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
                     +++    +L K+   G+ L   ++  ++N  C+ G+  +A+EL   M+ R
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G+ P   T   ++  LCK G    AA     + E G +P+  +++ +++ +C+ R++  A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 504 FELLDELVIK 513
            ++   +  K
Sbjct: 282 LDIFSYMKAK 291


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 191/343 (55%), Gaps = 13/343 (3%)

Query: 174 NLLIES--NQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           N +I S   + DLA + L+Y +  +R   +P+   FN LI  +C+   ++ A ++  +M 
Sbjct: 15  NAVIRSLCRRADLA-SALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
               +  ++++Y+ LI+G C+ GR  EA+ELF EM   DQ  PD   Y  L+ G C+ G+
Sbjct: 74  LRGFA-QDVVSYAALIEGFCETGRIDEAVELFGEM---DQ--PDMHMYAALVKGLCKAGR 127

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
            +    ++  MK  G  P+   Y  +++  C E K +EA+E+  EM    L P  +  T 
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +IN +C+ GR+ +AL +L+ MK RGCK ++ T+N ++ G C EGK+ +A+ +L K+   G
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  +  +Y +++   C  G +E A  LLRLM   G +    T N L+  LCK G   D A
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT-DQA 306

Query: 470 IALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            +LF  +E  G KP + ++  L+  +C+  K+  A++ L+++V
Sbjct: 307 CSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMV 349



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 199/415 (47%), Gaps = 8/415 (1%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY  ++  L R     +    L  M     +     F +L+  +   +  +   ++F K+
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
            P+      + + +  +    E+ ++D A       +Q     P+  ++  L+K  CK G
Sbjct: 73  -PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCKAG 126

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
             E    +L+ MK+     P+   Y+ ++D  C   + +EA E+ +EM  K  + P  +T
Sbjct: 127 RGEEGLLMLRRMKELGWR-PSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKG-LAPCVVT 184

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
              +I+ +C+ G++  A +++E MK  GC PNV+ Y  L+ GFC EGK+ +A  + ++M+
Sbjct: 185 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMR 244

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              + PD + Y  LI   C  G ++ A  LL+ M+  G  AD  T+N ++  LC++G+ +
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +A  + + L   GI  N  ++  ++N  C+ G+++ A + L  M+  G  P   T +  +
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LCK   +++    +  +++   KP + ++ +++  + + R          E+V
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 419



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 54/366 (14%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N+LI+  C  G +ESAF +L+ M+   +   +  TY+ LI+ LCK+GR  +A
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL-IADQYTYNALINALCKDGRTDQA 306

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+ + ++  I P+A+T+N LI+G C+ GKVD A K +E M + GC P+ + Y++ + 
Sbjct: 307 CSLFDSLETRG-IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIE 365

Query: 318 GFCKEGKLQEAKEVFDEM----------------------KNFLL-------------KP 342
             CK    QE      EM                      +N+ L              P
Sbjct: 366 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 425

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + YTT +  +C  GR++EA  +L EM + G   D + +N ++ G    G+ + A+ +L
Sbjct: 426 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELE-----------KAIE------LLRLMLCRGF 445
           +++       N+ +Y I+L    +   +E           KAIE      L  +M    F
Sbjct: 486 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 545

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           LP+  T + +L    + G  E+A   +  + E       D +  LV   C+ ++ L A+ 
Sbjct: 546 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 605

Query: 506 LLDELV 511
           L+  ++
Sbjct: 606 LVCSMI 611



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 160/381 (41%), Gaps = 53/381 (13%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP+    ++ +N L +S +VD+A  FL+         P+T  ++  I+H CK    +   
Sbjct: 319 KPNAVTFNSLINGLCKSGKVDIAWKFLE-KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377

Query: 223 EVLKEM-----KKSQMSY-----------------------------PNLITYSTLIDGL 248
             + EM     K S ++Y                             P+++TY+T +   
Sbjct: 378 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 437

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C  GR  EA  +  EM SK+ +  D + YN L+DG    G+ D A  I++ M +    PN
Sbjct: 438 CIEGRLNEAENVLMEM-SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 496

Query: 309 VFNYTTLMN-----------------GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            F Y  L+                  G  K  +L +   +FD MK     P++  Y++++
Sbjct: 497 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 556

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             F   GR +EA  L+  MKE     +   +  ++   C+  +  +A  ++  +   G  
Sbjct: 557 EGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFI 616

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            +  SY+ +L+    +G+ +KA E+      + + P       ++  L K G ++ +   
Sbjct: 617 PHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREM 676

Query: 472 LFGLVEMGFKPESDSWALLVE 492
           +  L  M  +P   ++A+L E
Sbjct: 677 IIMLERMNCRPSHQTYAMLTE 697



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/381 (21%), Positives = 162/381 (42%), Gaps = 56/381 (14%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F+++ E +G   N  T+ ++++ L +  K +     L +M    C      + + +
Sbjct: 306 ACSLFDSL-ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364

Query: 138 KHFSNCSLHERVL----EMFHK------------IHPITREK------------------ 163
           +H       +  L    EM  K            IH + +E+                  
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 424

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +T +       +++ A+N L   +++  +  +T  +N L+  H   G  + A  
Sbjct: 425 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN-GVTVDTMAYNTLMDGHASIGQTDHAVS 483

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCK-----------NGRFREAIELFE-----EMVSK 267
           +LK+M  S  S PN  TY  L+  L +                +AIEL +     +++ K
Sbjct: 484 ILKQMT-SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 542

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           ++ LP++ TY+ +++GF   G+ + A  ++  MK +  + N   YT L+  FCK  +  +
Sbjct: 543 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 602

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +   M      P  + Y  L++     G+ D+A E+    + +    D + + +I+ 
Sbjct: 603 AWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 662

Query: 388 GLCREGKIE---EALGMLEKL 405
           GL ++G  +   E + MLE++
Sbjct: 663 GLIKKGHSDISREMIIMLERM 683


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 197/406 (48%), Gaps = 42/406 (10%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  +L  + R ++ + V ++ R+M       +   F  L+K F +CS     L  F KI 
Sbjct: 79  FCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKIT 138

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    PSL   ST L+ L   ++V  A +F      H   KPN   F  L+   C+ G 
Sbjct: 139 KLGFH-PSLVTFSTLLHGLCVEDRVSEALHFF-----HQICKPNVIAFTTLMNGLCREGR 192

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +  A  +L  M +  +  PN ITY T++DG+CK G    A+ L  +M    +I P+ + Y
Sbjct: 193 VVEAVALLDRMVEDGLQ-PNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIY 251

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC----------------- 320
           + +IDG  + G+   A+ +   M+  G +PN+F Y  ++NGFC                 
Sbjct: 252 SAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFE 311

Query: 321 ------------------KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
                             KEGK  EA+E+++EM    + P+TI Y ++I+ F +  R+D 
Sbjct: 312 RKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDA 371

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  +   M  +GC  D++TF+I++ G C   ++++ + +L ++   G+  N  +Y  +++
Sbjct: 372 AERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIH 431

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             CQ G L  A++LL+ M+  G  P+  T N LL  LC  G  +DA
Sbjct: 432 GFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 225/480 (46%), Gaps = 54/480 (11%)

Query: 83  NTVSEQKGFNH-----NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           + VSE   F H     N   + T+++ L R  +     A+L +M  +  + ++  +  ++
Sbjct: 160 DRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 219

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                       L +  K+  ++R KP++   S  ++ L +  +   AQN      Q   
Sbjct: 220 DGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFS-EMQEKG 278

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +N +I   C  G    A  +L+EM + +MS P+++T+S LI+ L K G+F EA
Sbjct: 279 ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMS-PDVVTFSVLINALVKEGKFFEA 337

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL+ EM+ +  I+P+ +TYN +IDGF +  ++D A+++   M   GC+P+V  ++ L++
Sbjct: 338 EELYNEMLPRG-IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC-- 375
           G+C   ++ +  ++  EM    L  +TI YTTLI+ FC+ G ++ AL+LL+EM   G   
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCP 456

Query: 376 --------------------------------------------KADIVTFNIILGGLCR 391
                                                       + D+ T+NI++ GL  
Sbjct: 457 NVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLIN 516

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           EGK  EA  + E++ + G+  +  +Y  V++  C++  L++A ++   M  +GF P   T
Sbjct: 517 EGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVT 576

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L+   CK G   D       +   G    + ++  L+   C+   +  A ++  E++
Sbjct: 577 FTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI 636



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 184/352 (52%), Gaps = 13/352 (3%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            T++ +++ L +  KF   + +  +M       +   + +++  FS  +  +    MF+ 
Sbjct: 319 VTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFY- 377

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +       P +   S  ++    + +VD     L   ++   L  NT  +  LI   C+ 
Sbjct: 378 LMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR-GLVANTITYTTLIHGFCQL 436

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK-------- 267
           G L +A ++L+EM  S +  PN++T +TL+DGLC NG+ ++A+E+F+ M           
Sbjct: 437 GNLNAALDLLQEMISSGVC-PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASH 495

Query: 268 --DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
             + + PD  TYN+LI G    GK   A+++ E M + G  P+   Y ++++G CK+ +L
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRL 555

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA ++FD M +    PD + +TTLIN +C+ GRV + LE+  EM  RG  A+ +T+  +
Sbjct: 556 DEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTL 615

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + G C+ G I  AL + +++   G+Y +  + R +L     K EL++A++ L
Sbjct: 616 IHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 227/488 (46%), Gaps = 59/488 (12%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C K P  AL  F  ++ + GF+ +  T++T+L  L    +         Q+    CK + 
Sbjct: 124 CSKLP-FALSTFGKIT-KLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNV 177

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNF 188
             F  LM          RV+E    +  +  +  +P+     T ++ + +      A N 
Sbjct: 178 IAFTTLMNGLCR---EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+   +  R+KPN  I++ +I    K G    A  +  EM++  +S PNL TY+ +I+G 
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS-PNLFTYNCMINGF 293

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVL---------------------------- 280
           C +GR+ EA  L  EM  + ++ PD +T++VL                            
Sbjct: 294 CSSGRWSEAQRLLREMFER-KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN 352

Query: 281 -------IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
                  IDGF +  ++D A+++   M   GC+P+V  ++ L++G+C   ++ +  ++  
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           EM    L  +TI YTTLI+ FC+ G ++ AL+LL+EM   G   ++VT N +L GLC  G
Sbjct: 413 EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNG 472

Query: 394 KIEEALGMLEKLWYDGIYLNKA-----------SYRIVLNFSCQKGELEKAIELLRLMLC 442
           K+++AL M + +    + L+ +           +Y I++     +G+  +A EL   M  
Sbjct: 473 KLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPH 532

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           RG +P   T N ++  LCK    ++A      +   GF P+  ++  L+   C+  ++  
Sbjct: 533 RGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGD 592

Query: 503 AFELLDEL 510
             E+  E+
Sbjct: 593 GLEVFCEM 600



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 201/418 (48%), Gaps = 16/418 (3%)

Query: 53  ARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE 112
           +R +   + + A I  +  +     A  +F+ + E KG + N  TY  +++      ++ 
Sbjct: 242 SRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE-KGISPNLFTYNCMINGFCSSGRWS 300

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
               +LR+M           F  L+             E+++++ P     P+    ++ 
Sbjct: 301 EAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLP-RGIIPNTITYNSM 359

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           ++   + N++D A+    Y        P+   F+ILI  +C    ++   ++L EM +  
Sbjct: 360 IDGFSKQNRLDAAERMF-YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRG 418

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +   N ITY+TLI G C+ G    A++L +EM+S   + P+ +T N L+DG C  GK+  
Sbjct: 419 L-VANTITYTTLIHGFCQLGNLNAALDLLQEMISSG-VCPNVVTCNTLLDGLCNNGKLKD 476

Query: 293 AKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           A ++ + M+            N   P+V  Y  L+ G   EGK  EA+E+++EM +  L 
Sbjct: 477 ALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLV 536

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PDTI Y ++I+  C+  R+DEA ++   M  +G   D+VTF  ++ G C+ G++ + L +
Sbjct: 537 PDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEV 596

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
             ++   GI  N  +YR +++  CQ G +  A+++ + M+  G  P   T   +L  L
Sbjct: 597 FCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 163/317 (51%), Gaps = 7/317 (2%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L   P+   F+ L+   C    +  A     ++ K     PN+I ++TL++GLC+ GR  
Sbjct: 140 LGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK-----PNVIAFTTLMNGLCREGRVV 194

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + MV +D + P+ +TY  ++DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 195 EAVALLDRMV-EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSA 253

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++G  K+G+  +A+ +F EM+   + P+   Y  +IN FC +GR  EA  LL+EM ER 
Sbjct: 254 IIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK 313

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+VTF++++  L +EGK  EA  +  ++   GI  N  +Y  +++   ++  L+ A 
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAE 373

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +  LM  +G  P   T + L+   C A   +D    L  +   G    + ++  L+   
Sbjct: 374 RMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGF 433

Query: 495 CRGRKLLFAFELLDELV 511
           C+   L  A +LL E++
Sbjct: 434 CQLGNLNAALDLLQEMI 450


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 236/500 (47%), Gaps = 74/500 (14%)

Query: 69  IKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF 128
           ++ E++    + +F   S+Q  F  +++ +  +L KL +  +F+A+  +L++M       
Sbjct: 63  LRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVI 122

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
                L  ++ +++  L+  +L+    +        +    +  LN+L++ N++ L +  
Sbjct: 123 DNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVE-- 180

Query: 189 LKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           + +SN   R ++P+   FNILIK  C+   +  A  +++EM+   +  P+  T++T++ G
Sbjct: 181 IAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGL-LPDEKTFTTIMQG 239

Query: 248 L-----------------------------------CKNGRFREAIELFEEMVSKDQILP 272
                                               CK GR  EA+   EEM  ++   P
Sbjct: 240 FIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFP 299

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D  T+N+L++G  + G V  A ++M+ M   G +P+++ Y +L++G CK G++ EA +V 
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVL 359

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDE------------------------------ 362
           ++M      P+T+ Y T+I+  C+  +V+E                              
Sbjct: 360 NQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLS 419

Query: 363 -----ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
                A+EL KEMK +GC  D  T+N+++  LC  GK++EAL +L+++   G   N  +Y
Sbjct: 420 RNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITY 479

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++  C+   + +A E+   M  +G   +  T N L+  LCK+   E+A+  +  ++ 
Sbjct: 480 NTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIM 539

Query: 478 MGFKPESDSWALLVELICRG 497
            G +P+  ++  L+   C+ 
Sbjct: 540 EGLRPDKFTYNSLLTYFCKA 559



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 174/315 (55%), Gaps = 4/315 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N LI   CK G ++ A +VL +M +   S PN +TY+T+I  LCK  +  EA +
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCS-PNTVTYNTIISTLCKENQVEEATK 392

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   +  K  ILPD  TYN LI G C       A ++ + MK  GC+P+ F Y  L++  
Sbjct: 393 LALVLTGKG-ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL 451

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C  GKLQEA  +  EM+      + I Y TLI+ FC+  R+ EA E+  +M+ +G   + 
Sbjct: 452 CFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++ GLC+  ++EEA  +++++  +G+  +K +Y  +L + C+ G+++KA ++++ 
Sbjct: 512 VTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQT 571

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGR 498
           M   G  P   T   L+  LCKAG  E AA  L   ++M G      ++  +++ + R +
Sbjct: 572 MASDGCEPDIVTYGTLIAGLCKAGRVE-AATKLLRTIQMKGINLTPHAYNPVIQALFRRK 630

Query: 499 KLLFAFELLDELVIK 513
           +   A  L  E++ K
Sbjct: 631 RSKEAVRLFREMIEK 645



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 186/367 (50%), Gaps = 43/367 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESA 221
           P +   ++ ++ L +  +VD A   +K  NQ +     PNT  +N +I   CK   +E A
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEA---VKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEA 390

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            + L  +   +   P++ TY++LI GLC +     A+EL++EM +K    PD  TYN+LI
Sbjct: 391 TK-LALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKG-CHPDEFTYNMLI 448

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK----- 336
           D  C  GK+  A  +++ M+ +GC  NV  Y TL++GFCK  ++ EA+E+FD+M+     
Sbjct: 449 DSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVS 508

Query: 337 ------NFL------------------------LKPDTIGYTTLINCFCRAGRVDEALEL 366
                 N L                        L+PD   Y +L+  FC+AG + +A ++
Sbjct: 509 RNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADI 568

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           ++ M   GC+ DIVT+  ++ GLC+ G++E A  +L  +   GI L   +Y  V+    +
Sbjct: 569 VQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFR 628

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA-LFGLVEMGFKPESD 485
           +   ++A+ L R M+ +   P   T   +   LC+ G     A+  +  ++E G+ PE  
Sbjct: 629 RKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFS 688

Query: 486 SWALLVE 492
           S+ +L E
Sbjct: 689 SFYMLAE 695



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 164/366 (44%), Gaps = 12/366 (3%)

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
           +H   P      S K  S        +N   L       +N   RL PN     +L  H 
Sbjct: 9   YHTWFPFHHHLASHKPTSNSTLSFATTNHEPLTTT----TNSATRLSPNFTPTQLL--HS 62

Query: 213 CKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEM-VSKDQI 270
            +R    SA   L      Q ++ P+   +  ++  L K G F    ++ +EM +S   I
Sbjct: 63  LRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVI 122

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAK 329
             D+L   V I+ +   G  +   + ++ M+   G   N   Y  L+N      KL+  +
Sbjct: 123 DNDSLL--VFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVE 180

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
                M +  ++PD   +  LI   CRA ++  A+ L++EM++ G   D  TF  I+ G 
Sbjct: 181 IAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGF 240

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR-GFLPH 448
             EG ++ A+ + E++   G  +   +  +++N  C++G +E+A+  +  M  R GF P 
Sbjct: 241 IEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPD 300

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N L+  L K G  + A   +  ++  GF P+  ++  L+  +C+  ++  A ++L+
Sbjct: 301 KYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLN 360

Query: 509 ELVIKE 514
           +++ ++
Sbjct: 361 QMIERD 366


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 177/328 (53%), Gaps = 3/328 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +   +T +N L +  +   A    K   +    +P+   ++ +I   CK   +  A 
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEA-GCQPDVVTYSTIIDSLCKDRRVNEAL 65

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++   MK   +S PN+ TY++LI GLC   R+REA  +  EM+S + I+P+ +T+++LI+
Sbjct: 66  DIFSYMKAKGIS-PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN-IMPNIVTFSLLIN 123

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            FC+ G V  A+ +++ M   G  PNV  Y++LMNG+  + ++ EA+++FD M     KP
Sbjct: 124 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y  LIN +C+A R+ EA +L  EM  +G   DIV++N ++ GLC+ G++ EA  + 
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +  +G   +  +Y I+L+  C++G L KA  L R M      P+    N L+  +CK+
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALL 490
              ++A      L   G +P    W L 
Sbjct: 304 RNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 168/315 (53%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +  +I   CK G   +A  + K+M ++    P+++TYST+ID LCK+ R  EA+
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQ-PDVVTYSTIIDSLCKDRRVNEAL 65

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ++F  M +K  I P+  TYN LI G C   +   A  ++  M +    PN+  ++ L+N 
Sbjct: 66  DIFSYMKAKG-ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FCKEG + EA+ V   M    ++P+ + Y++L+N +     V EA +L   M  +GCK D
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + ++NI++ G C+  +I EA  +  ++ + G+  +  SY  +++  CQ G L +A +L +
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 244

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            ML  G LP   T + LL   CK G    A      +     KP    + +L++ +C+ R
Sbjct: 245 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 304

Query: 499 KLLFAFELLDELVIK 513
            L  A +L  EL ++
Sbjct: 305 NLKEARKLFSELFVQ 319



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 175/360 (48%), Gaps = 39/360 (10%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G+  +  TY TI++ L +  +  A   + ++M    C                      
Sbjct: 4   RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGC---------------------- 41

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                         +P +   ST ++ L +  +V+ A +   Y      + PN   +N L
Sbjct: 42  --------------QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK-GISPNIFTYNSL 86

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I+  C       A  +L EM    +  PN++T+S LI+  CK G   EA  + + M ++ 
Sbjct: 87  IQGLCNFSRWREASAMLNEMMSLNI-MPNIVTFSLLINIFCKEGNVFEARGVLKTM-TEM 144

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + P+ +TY+ L++G+    +V  A+K+ + M   GC P+VF+Y  L+NG+CK  ++ EA
Sbjct: 145 GVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 204

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           K++F+EM +  L PD + Y TLI+  C+ GR+ EA +L K M   G   D+ T++I+L G
Sbjct: 205 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 264

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C++G + +A  +   +    +  N   Y I+++  C+   L++A +L   +  +G  P+
Sbjct: 265 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 113/212 (53%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G  P+V  YTT++NG CK G+   A  +F +M     +PD + Y+T+I+  C+  R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           V+EAL++   MK +G   +I T+N ++ GLC   +  EA  ML ++    I  N  ++ +
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++N  C++G + +A  +L+ M   G  P+  T + L+          +A      ++  G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
            KP+  S+ +L+   C+ +++  A +L +E++
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 212


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 198/352 (56%), Gaps = 5/352 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +P +   +T ++ L +   V+ A +F  Y+  + R + P+   ++ LI   C  G L  A
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVNEAYDF--YTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           F +L EM    ++ P++ TY+ LID LCK G+ +EA  L   M +K+ + P+ +TY+ L+
Sbjct: 327 FSLLNEMTLKNIN-PDVYTYTILIDALCKEGKLKEAKNLLGVM-TKEGVKPNVVTYSTLM 384

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG+C  G+V  AK+I   M     NP+V +Y  ++NG CK   + EA  +  EM +  + 
Sbjct: 385 DGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVV 444

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+T+ Y +LI+  C++GR+  AL+L+KE+  RG  AD++T+  +L GLC+   +++A+ +
Sbjct: 445 PNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIAL 504

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K+   GI  NK +Y  +++  C+   L+ A +L + +L +G      T N ++  LCK
Sbjct: 505 FMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCK 564

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            GM ++A      + + G  P++ ++ +++  +    +   A +LL E++ K
Sbjct: 565 EGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 616



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 216/393 (54%), Gaps = 17/393 (4%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVL 118
           +S+G  ++ +    E +CA+++   + E +    +   Y TI+D L + K   EA D   
Sbjct: 238 VSYGTLLNGLCKIGETRCAIKLLRMI-EDRSTRPDVVMYNTIIDGLCKDKLVNEAYD--- 293

Query: 119 RQMTYETCKFHEGIFLNLMKHFS---NCSLHERVLEMFHKIHPITREK--PSLKAISTCL 173
               + T     GIF +++ + +      L  +++  F  ++ +T +   P +   +  +
Sbjct: 294 ----FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILI 349

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
           + L +  ++  A+N L    +   +KPN   ++ L+  +C  G + +A ++   M ++++
Sbjct: 350 DALCKEGKLKEAKNLLGVMTKE-GVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           + P++ +Y+ +I+GLCK     EA+ L  EM+ K+ ++P+ +TYN LIDG C+ G++  A
Sbjct: 409 N-PSVCSYNIMINGLCKGKSVDEAMNLLREMLHKN-VVPNTVTYNSLIDGLCKSGRITSA 466

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
             +M+ + + G   +V  YT+L++G CK   L +A  +F +MK   ++P+   YT LI+ 
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+  R+  A +L + +  +GC  D+ T+N+++GGLC+EG ++EAL M  K+  +G   +
Sbjct: 527 LCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPD 586

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             ++ I++    +K E +KA +LL  M+ +G L
Sbjct: 587 AVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 196/412 (47%), Gaps = 45/412 (10%)

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           MKHF       + +E       +   +P L  +S  +N      Q+  + + L    + L
Sbjct: 145 MKHFPTAISLSKQME-------VKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILK-L 196

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
             +PNT I   L+K  C +G ++ +     +   +Q    N ++Y TL++GLCK G  R 
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLH-FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRC 255

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           AI+L   M+      PD + YN +IDG C+   V+ A      M + G  P+V  Y+TL+
Sbjct: 256 AIKLLR-MIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            GFC  G+L  A  + +EM    + PD   YT LI+  C+ G++ EA  LL  M + G K
Sbjct: 315 CGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVK 374

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++VT++ ++ G C  G++  A  +   +    +  +  SY I++N  C+   +++A+ L
Sbjct: 375 PNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNL 434

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAG--------MAE---------------------- 466
           LR ML +  +P+  T N L+  LCK+G        M E                      
Sbjct: 435 LREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCK 494

Query: 467 ----DAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               D AIALF  + E G +P   ++  L++ +C+G +L  A +L   +++K
Sbjct: 495 NQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK 546



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 111/217 (51%), Gaps = 3/217 (1%)

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           M  M+N    P++  +  ++    K      A  +  +M+   ++PD +  + LINCFC 
Sbjct: 123 MLLMRNT---PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++  +  +L ++ + G + + +    ++ GLC +G+++++L   +K+   G  +N+ S
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +LN  C+ GE   AI+LLR++  R   P     N ++  LCK  +  +A      + 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             G  P+  +++ L+   C   +L+ AF LL+E+ +K
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK 336



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/305 (20%), Positives = 132/305 (43%), Gaps = 29/305 (9%)

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M+ ++   PNL+T S LI+ L   G+   +  +  +++ K    P+++T   L+ G  R 
Sbjct: 1   MEAAKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKIL-KLGYQPNSITLTTLMKGETRC 59

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK---------------------EGKLQ 326
                A K+   +++    P ++  ++L +                            + 
Sbjct: 60  -----AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVH 114

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A   F+ M      P  I +  ++    +      A+ L K+M+ +G + D+VT +I++
Sbjct: 115 DAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILI 174

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
              C  G++  +  +L K+   G   N      ++   C KGE++K++     ++ +GF 
Sbjct: 175 NCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQ 234

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFE 505
            +  +   LL  LCK G     AI L  ++E    +P+   +  +++ +C+ + +  A++
Sbjct: 235 MNQVSYGTLLNGLCKIGETR-CAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD 293

Query: 506 LLDEL 510
              E+
Sbjct: 294 FYTEM 298


>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
 gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 217/459 (47%), Gaps = 49/459 (10%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
           K ++ ++      LI+ E++ + AL IF++ + +   GF H+  T++ ++ KL    +F 
Sbjct: 37  KWAKTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFR 96

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
             + +L +M  E     E I L++ + +         + +FHK+      KP+ K+  + 
Sbjct: 97  LAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDF-HCKPTEKSYISV 155

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR-GTLESAF--------- 222
           L +L+E NQ+  A  F +   + + + P     N+LIK  CK  GT++ A          
Sbjct: 156 LAILVEENQLKSAFRFYR-DMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNH 214

Query: 223 --------------------------EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
                                     E+L+EM+    S P+++TY+++I GLC+     E
Sbjct: 215 GCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCS-PSVVTYTSIIHGLCQLNNVDE 273

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L E+M  K+ I P+  TY+ L+DGFC+ G   RA+ I+E M      PN+ +Y+TL+
Sbjct: 274 AMRLLEDMKDKN-IEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLL 332

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG C EGK+ EA E+FD MK    KPD   Y  ++NC C   R  EA   L EM   G K
Sbjct: 333 NGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIK 392

Query: 377 ADIVTF-------NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
            + +T+       N ++ GLC       A  +   +   GI +   ++  +L   C K +
Sbjct: 393 PNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKD 452

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           L K   +L  M+  G +P     + ++   C    A DA
Sbjct: 453 LPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDA 491



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 167/332 (50%), Gaps = 8/332 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           K  L   S  ++ LI +NQ  LA+  L      ++ +      +IL+      G +    
Sbjct: 76  KHDLNTFSLMISKLISANQFRLAETLL----DRMKEEKIDVTEDILLSICRAYGRIHKPL 131

Query: 223 EVLKEMKKSQMSY--PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           + ++   K Q  +  P   +Y +++  L +  + + A   + +M  K  I P   + NVL
Sbjct: 132 DSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDM-RKMGIPPTVTSLNVL 190

Query: 281 IDGFCR-GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           I  FC+  G +D+A  +   M N+GC P+ + Y TL+NG C+   + EAKE+  EM+   
Sbjct: 191 IKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKG 250

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             P  + YT++I+  C+   VDEA+ LL++MK++  + ++ T++ ++ G C+ G    A 
Sbjct: 251 CSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRAR 310

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +LE +    +  N  SY  +LN  C +G++ +A+E+   M  +GF P      +++  L
Sbjct: 311 DILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCL 370

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           C     ++AA  L  +V  G KP   +W+L V
Sbjct: 371 CDVSRFQEAANFLDEMVLCGIKPNRITWSLHV 402



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 3/215 (1%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCK-EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
           M+  G  P V +   L+  FCK  G + +A  +F  M N   +PD+  Y TLIN  CR  
Sbjct: 175 MRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFR 234

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            + EA ELL+EM+ +GC   +VT+  I+ GLC+   ++EA+ +LE +    I  N  +Y 
Sbjct: 235 SIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYS 294

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +++  C+ G   +A ++L LM+ +   P+  + + LL  LC  G   + A+ +F  +++
Sbjct: 295 SLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINE-ALEIFDRMKL 353

Query: 479 -GFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
            GFKP++  +  +V  +C   +   A   LDE+V+
Sbjct: 354 QGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVL 388



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 142/282 (50%), Gaps = 10/282 (3%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG-GKVDR--- 292
           +L T+S +I  L    +FR A  L + M  +++I    +T ++L+   CR  G++ +   
Sbjct: 78  DLNTFSLMISKLISANQFRLAETLLDRM-KEEKI---DVTEDILL-SICRAYGRIHKPLD 132

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           + ++   M++  C P   +Y +++    +E +L+ A   + +M+   + P       LI 
Sbjct: 133 SIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIK 192

Query: 353 CFCR-AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
            FC+ +G +D+A+ L + M   GC+ D  T+  ++ GLCR   I EA  +L+++   G  
Sbjct: 193 AFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCS 252

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            +  +Y  +++  CQ   +++A+ LL  M  +   P+  T + L+   CK G +  A   
Sbjct: 253 PSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDI 312

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L  +++   +P   S++ L+  +C   K+  A E+ D + ++
Sbjct: 313 LELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQ 354



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 138/298 (46%), Gaps = 12/298 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F T+S   G   ++ TY T+++ L R++       +L++M  + C      + +++
Sbjct: 204 AMHLFRTMSNH-GCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSII 262

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 +  +  + +   +     E P++   S+ ++   ++     A++ L+   Q  R
Sbjct: 263 HGLCQLNNVDEAMRLLEDMKDKNIE-PNVFTYSSLMDGFCKTGHSSRARDILELMIQK-R 320

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+PN   ++ L+   C  G +  A E+   MK  Q   P+   Y  +++ LC   RF+EA
Sbjct: 321 LRPNMISYSTLLNGLCNEGKINEALEIFDRMK-LQGFKPDAGLYGKIVNCLCDVSRFQEA 379

Query: 258 IELFEEMVSKDQILPDALTY-------NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
               +EMV    I P+ +T+       N +I G C     +RA ++   +   G +  V 
Sbjct: 380 ANFLDEMVLCG-IKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVD 438

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
            + +L+  FC +  L +   + DEM      P    ++T++NCFC   +  +A++LL+
Sbjct: 439 TFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQ 496


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 181/354 (51%), Gaps = 40/354 (11%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKS-QMSYPNLITYSTLIDGLCKNGRFREAIE 259
           N    N+++K  C+ G  + A  +  +MK++     P+ +TY+TL++G CK  R  EA  
Sbjct: 111 NVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARV 170

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LFE M       P+ +TY+VLID +C+ G+V     ++E M+  G   +VF Y++L++ F
Sbjct: 171 LFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAF 230

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C EG ++  +E+FDEM    + P+ + Y+ L+    R GR  EA E+LK+M  RG + D+
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDV 290

Query: 380 V-----------------------------------TFNIILGGLCREGKIEEALGMLEK 404
           V                                   T+N+++ GLC+E ++++A G++E 
Sbjct: 291 VAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEM 350

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL--PHYATSNELLVRLCKA 462
           +   G   +  +Y  +L   C  G++ +A++L +L+L   F   P   T N L+  LCK 
Sbjct: 351 MVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKE 410

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           G   DAA     +VEMG +    ++  L+E     RKL+ A +L    V  ESG
Sbjct: 411 GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV--ESG 462



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 193/377 (51%), Gaps = 14/377 (3%)

Query: 137 MKHFSNCSLHERVLEMFHK-IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           + H    SL + V  +FH+ I       PS  A ST ++ L ++ Q D   +        
Sbjct: 13  IAHTQPHSLSDAV-SLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSA 71

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P     + L +          AF VL  M K      N+   + ++ G C++G+  
Sbjct: 72  LVL-PRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGV-NVYNLNLVLKGFCRSGQCD 129

Query: 256 EAIELFEEMVSK-DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYT 313
           +A+ LF +M    D ++PD +TYN L++GFC+  ++  A+ + E MK  G C PN+  Y+
Sbjct: 130 KAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYS 189

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++ +CK G++ E   + +EM+   LK D   Y++LI+ FC  G ++   EL  EM  R
Sbjct: 190 VLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRR 249

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
               ++VT++ ++ GL R G+  EA  ML+ +   G+  +  +Y ++ +  C+ G    A
Sbjct: 250 KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDA 309

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWAL 489
           I++L LM+ +G  P   T N ++  LCK    +DA    FG+VEM    G KP++ ++  
Sbjct: 310 IKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDA----FGVVEMMVKKGKKPDAVTYNT 365

Query: 490 LVELICRGRKLLFAFEL 506
           L++ +C   K+  A +L
Sbjct: 366 LLKGLCGAGKIHEAMDL 382



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 225/536 (41%), Gaps = 45/536 (8%)

Query: 19  TSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCA 78
           TS  S P  S L        + D  V      V A    RF S  A          P  A
Sbjct: 37  TSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFA 96

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM--TYETCKFHEGIFLN- 135
             + + ++ ++GF  N      +L    R  + +   ++  QM   Y+ C   + +  N 
Sbjct: 97  FSVLSLMT-KRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYD-CVVPDCVTYNT 154

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+  F           +F  +      +P+L   S  ++   +S +V      L+   + 
Sbjct: 155 LVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             LK +  +++ LI   C  G +E+  E+  EM + ++S PN++TYS L+ GL + GR+R
Sbjct: 215 -GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVS-PNVVTYSCLMQGLGRTGRWR 272

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA E+ ++M ++  + PD + Y VL DG C+ G+   A K+++ M   G  P    Y  +
Sbjct: 273 EASEMLKDMTARG-VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVV 331

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK------- 368
           +NG CKE ++ +A  V + M     KPD + Y TL+   C AG++ EA++L K       
Sbjct: 332 VNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKF 391

Query: 369 ------------------------------EMKERGCKADIVTFNIILGGLCREGKIEEA 398
                                          M E G + +IVT+N ++ G     K+ EA
Sbjct: 392 HVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEA 451

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           L + +     G   N  +Y +++N  C+   L  A  L   M   G  P     N L+  
Sbjct: 452 LKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTS 511

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           LC+    E A      +  +    +  S+ ++++   +   +  A ELL E+ + +
Sbjct: 512 LCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD 567



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 193/399 (48%), Gaps = 11/399 (2%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           + + IS    E + +   E+F+ +  +K  + N  TY+ ++  L R  ++     +L+ M
Sbjct: 223 YSSLISAFCGEGDIETGRELFDEMLRRK-VSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281

Query: 122 TYETCKFHEGIFLNLMKHF---SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           T    +     +  L              +VL++  +      E+P     +  +N L +
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQ----KGEEPGTLTYNVVVNGLCK 337

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
            +++D A   ++   +  + KP+   +N L+K  C  G +  A ++ K +   +    P+
Sbjct: 338 EDRMDDAFGVVEMMVKKGK-KPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPD 396

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + T + LI GLCK GR  +A  +   MV    +  + +TYN LI+G+    K+  A K+ 
Sbjct: 397 VFTCNNLIQGLCKEGRVHDAARIHSSMVEMG-LQGNIVTYNFLIEGYLAARKLIEALKLW 455

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           ++   +G +PN   Y+ ++NG CK   L  A+ +F +MK+  ++P  I Y  L+   CR 
Sbjct: 456 KYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCRE 515

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
             +++A  L +EM+      D+V+FNII+ G  + G ++ A  +L +++   +  +  ++
Sbjct: 516 DSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTF 575

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            I++N   + G L++A+ L   M+  G +P     + LL
Sbjct: 576 SILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLL 614



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 99/191 (51%), Gaps = 2/191 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN+  ++++I   CK   L  A  +  +MK S +  P +I Y+ L+  LC+     +A  
Sbjct: 465 PNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIR-PTVIDYNALMTSLCREDSLEQARS 523

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+EM + +  + D +++N++IDG  + G V  AK+++  M      P+   ++ L+N F
Sbjct: 524 LFQEMRNVNHNV-DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRF 582

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K G L EA  ++++M +    P  + + +L+  +   G  ++ + LL +M ++    D 
Sbjct: 583 SKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDS 642

Query: 380 VTFNIILGGLC 390
              + IL  LC
Sbjct: 643 KLTSTILACLC 653



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 43/215 (20%), Positives = 95/215 (44%), Gaps = 39/215 (18%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF+ N+ TY+ +++ L + +                     G+F         C + +
Sbjct: 460 ESGFSPNSMTYSVMINGLCKMQMLSVA---------------RGLF---------CKMKD 495

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             +            +P++   +  +  L   + ++ A++  +   +++    +   FNI
Sbjct: 496 SGI------------RPTVIDYNALMTSLCREDSLEQARSLFQ-EMRNVNHNVDVVSFNI 542

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I    K G ++SA E+L EM    +  P+ +T+S LI+   K G   EA+ L+E+MVS 
Sbjct: 543 IIDGTLKAGDVKSAKELLSEMFMMDL-VPDAVTFSILINRFSKLGMLDEAMGLYEKMVSC 601

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
             + P  + ++ L+ G+   G+ ++   ++  M +
Sbjct: 602 GHV-PGVVVFDSLLKGYGLKGETEKIISLLHQMAD 635


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 175/320 (54%), Gaps = 4/320 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN  ++N +I   CK   +  A+ +  EM    +S  +++TY+TLI G C   + +EAI
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS-ADVVTYTTLIYGFCIASKLKEAI 254

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L  EMV K  I P+  TYN+L+D  C+ GKV  AK ++  M      P+V  Y+TLM+G
Sbjct: 255 GLLNEMVLK-TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDG 313

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +    +L++A+ VF+ M    + PD   YT LIN FC+   VDEAL L KEM ++     
Sbjct: 314 YFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           IVT++ ++ GLC+ G+I     +++++   GI  N  +Y  +++  C+ G L++AI L  
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFN 433

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  +G  P   T   LL  LCK G  +DA  A   L+  G+  +   + +++   C+  
Sbjct: 434 KMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQG 493

Query: 499 KLLFAFELLDELVIKESGTI 518
            L  A  +L ++  +E+G +
Sbjct: 494 LLEEALTMLSKM--EENGCV 511



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 191/353 (54%), Gaps = 4/353 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N   Y TI+D L +Y+       +  +MT +        +  L+  F   S  +  + + 
Sbjct: 198 NVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLL 257

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +++  +    P++   +  ++ L +  +V  A+N L    +   +KP+   ++ L+  + 
Sbjct: 258 NEM-VLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKAC-VKPDVITYSTLMDGYF 315

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
               L+ A  V   M    ++ P++ +Y+ LI+G CKN    EA+ LF+EM  K+ + P 
Sbjct: 316 LVYELKKAQHVFNAMSLMGVT-PDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV-PG 373

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TY+ LIDG C+ G++     +++ M++ G   NV  Y +L++G CK G L  A  +F+
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFN 433

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           +MK+  ++P +  +T L++  C+ GR+ +A E  +++  +G   D+  +N+++ G C++G
Sbjct: 434 KMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQG 493

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            +EEAL ML K+  +G   N  ++ I++N   +K E +KA +LLR M+CRG L
Sbjct: 494 LLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +I ++ ++D   K   +  A+ L   +  K  I PD +T N+LI+ FC  G++     
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKG-IQPDLITLNILINCFCHMGQITFGFS 115

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   G  P+   +TTL+ G C +G++ +A    D++    +K D + Y TLIN  C
Sbjct: 116 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 175

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G    A++L++++  R  K ++  +N I+  LC+   + EA G+  ++   GI  +  
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  ++   C   +L++AI LL  M+ +   P+  T N L+  LCK G  ++A   L  +
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM 295

Query: 476 VEMGFKPESDSWALLVE 492
           ++   KP+  +++ L++
Sbjct: 296 LKACVKPDVITYSTLMD 312



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 103/207 (49%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  +++ F K      A  +   ++   ++PD I    LINCFC  G++     +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ +RG +   +TF  ++ GLC +G++ +AL   +KL   GI  ++ SY  ++N  C+
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+   AI+L+R +  R   P+    N ++  LCK  +  +A      +   G   +  +
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  L+   C   KL  A  LL+E+V+K
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLK 263



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/189 (20%), Positives = 84/189 (44%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F+ M      P  I +  +++ F +      A+ L   ++ +G + D++T NI
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C  G+I     +L K+   G   +  ++  ++   C KG++ KA+     +L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                 +   L+  +CK G    A   +  +     KP  + +  +++ +C+ + +  A+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 505 ELLDELVIK 513
            L  E+  K
Sbjct: 220 GLFSEMTAK 228


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 204/415 (49%), Gaps = 45/415 (10%)

Query: 148 RVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           +V +  H    + RE   +P      T ++ L +      A + L+   Q +  KP+TCI
Sbjct: 157 KVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGIT-KPDTCI 215

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +NI+I   CK G L+ A  +L EMK+  +  P++ITY++LIDGL K  ++ +   LF EM
Sbjct: 216 YNIVIDAFCKDGMLDGATSLLNEMKQKNIP-PDIITYTSLIDGLGKLSQWEKVRTLFLEM 274

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +  + I PD  T+N +IDG C+ GKV+ A++IM +M   G  PN   Y  +M+G+C  G+
Sbjct: 275 IHLN-IYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQ 333

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A+ +FD M +  ++PD I YT LIN +    ++D+A++L +E+ + G K  IVT ++
Sbjct: 334 MGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSV 393

Query: 385 -----------------------------------ILGGLCREGKIEEALGMLEKLWYDG 409
                                              +LGG  + G +EEA+    KL    
Sbjct: 394 LLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
              N   Y  V+N  C+ G+L+KA      +   G  P   T   ++   C+ G+ ++A 
Sbjct: 454 EDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK----ESGTIQV 520
             L  + + G  P++ ++ ++V    R  K+      L E+  K    E+ T+++
Sbjct: 514 DMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVEL 568



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 182/351 (51%), Gaps = 19/351 (5%)

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           MKH+S+      V+ +F +IH + R      A+ST +N     ++ DL  + L     H 
Sbjct: 85  MKHYSS------VVSIFREIHKL-RIPVDAFALSTVVNSCCLMHRTDLGFSVLAI---HF 134

Query: 197 R--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           +  +  N   F  LI+       ++ A  + K++ +  +  P+ + Y T++DGLCK G  
Sbjct: 135 KKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHT 194

Query: 255 REAIELF---EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           ++A +L    E+ ++K    PD   YN++ID FC+ G +D A  ++  MK     P++  
Sbjct: 195 QKAFDLLRLMEQGITK----PDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIIT 250

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT+L++G  K  + ++ + +F EM +  + PD   + ++I+  C+ G+V++A E++  M 
Sbjct: 251 YTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMI 310

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+G + + +T+N+++ G C  G++  A  + + +   GI  +  SY  ++N   +K +++
Sbjct: 311 EKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMD 370

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           KA++L R +   G  P   T + LL  L + G  E A I    +   G  P
Sbjct: 371 KAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIP 421



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 181/386 (46%), Gaps = 13/386 (3%)

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
           F A     R  +  TC         +   F N    +    +F ++   T+  PS  + S
Sbjct: 18  FFAYSIAPRHYSTNTCSISVKGNFGVSNEFENVKCLDDAFSLFRQM-VTTKPLPSAVSFS 76

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
             L  L+         +  +  ++ LR+  +    + ++   C     +  F VL    K
Sbjct: 77  KLLKALVHMKHYSSVVSIFREIHK-LRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFK 135

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             + Y N +T++TLI GL    + ++A+ LF+++V ++   PD + Y  ++DG C+ G  
Sbjct: 136 KGIPY-NEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHT 194

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
            +A  ++  M+     P+   Y  +++ FCK+G L  A  + +EMK   + PD I YT+L
Sbjct: 195 QKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSL 254

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+   +  + ++   L  EM       D+ TFN ++ GLC+EGK+E+A  ++  +   G+
Sbjct: 255 IDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGV 314

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE---- 466
             N+ +Y +V++  C +G++ +A  +   M+ +G  P   +   L+      G  E    
Sbjct: 315 EPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALI-----NGYVEKKKM 369

Query: 467 DAAIALF-GLVEMGFKPESDSWALLV 491
           D A+ LF  + + G KP   + ++L+
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLL 395



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 146/297 (49%), Gaps = 3/297 (1%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ AF + ++M  ++   P+ +++S L+  L     +   + +F E + K +I  DA   
Sbjct: 53  LDDAFSLFRQMVTTK-PLPSAVSFSKLLKALVHMKHYSSVVSIFRE-IHKLRIPVDAFAL 110

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-K 336
           + +++  C   + D    ++      G   N   +TTL+ G   E K+++A  +F ++ +
Sbjct: 111 STVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
             + +PD + Y T+++  C+ G   +A +LL+ M++   K D   +NI++   C++G ++
Sbjct: 171 ENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLD 230

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A  +L ++    I  +  +Y  +++   +  + EK   L   M+     P   T N ++
Sbjct: 231 GATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVI 290

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             LCK G  EDA   +  ++E G +P   ++ ++++  C   ++  A  + D ++ K
Sbjct: 291 DGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDK 347


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 186/350 (53%), Gaps = 8/350 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P     +T +  L ++ +VD A   + Y +      P+   + IL+   CK   +  A  
Sbjct: 66  PHNAVYNTIIKGLCDNGRVDSA--LVHYRDMQRHCAPSVITYTILVDALCKSARISDASL 123

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L++M ++  + PN++TY+TLI+G CK G   EA+ LF +M+ ++   PD  TYN+LIDG
Sbjct: 124 ILEDMIEAGCA-PNVVTYNTLINGFCKLGNMDEAVVLFNQML-ENSCSPDVFTYNILIDG 181

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+  +     K+++ M   GC PN   Y TLM+   K GK  +A  +   M     KP 
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              +  +I+ FC+ G++D A EL + M +RGC  DI T+NI++ G CR  +I++A  +LE
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G   +  +Y  +++  C+  ++++A E+  ++   G+     T + L+  LCK+ 
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRG----RKLLFAFELLDE 509
             +DA   L  +   G  P+  ++ +L+   C+     + L F  E+LD+
Sbjct: 362 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 411



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 169/311 (54%), Gaps = 3/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P++  ++ LI   CK    + A+ +L EM+K  +  P+   Y+T+I GLC NGR   A+ 
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGI-VPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            + +M  +    P  +TY +L+D  C+  ++  A  I+E M   GC PNV  Y TL+NGF
Sbjct: 90  HYRDM--QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 147

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G + EA  +F++M      PD   Y  LI+ +C+  R  +  +LL+EM + GC+ + 
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 207

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N ++  L + GK  +A  + + +       +  ++ ++++  C+ G+L+ A EL +L
Sbjct: 208 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  RG LP   T N ++   C+A   +DA   L  + E G  P+  ++  +V  +C+  +
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327

Query: 500 LLFAFELLDEL 510
           +  A+E+ + L
Sbjct: 328 VDEAYEVYEVL 338



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 208/409 (50%), Gaps = 9/409 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           ++ TY+T+++   + + F+    +L +M       H  ++  ++K   +   + RV    
Sbjct: 32  DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCD---NGRVDSAL 88

Query: 154 HKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
                + R   PS+   +  ++ L +S ++  A   L+         PN   +N LI   
Sbjct: 89  VHYRDMQRHCAPSVITYTILVDALCKSARISDASLILE-DMIEAGCAPNVVTYNTLINGF 147

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G ++ A  +  +M ++  S P++ TY+ LIDG CK  R ++  +L +EMV K    P
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCS-PDVFTYNILIDGYCKQERPQDGAKLLQEMV-KYGCEP 205

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           + +TYN L+D   + GK   A  + + M    C P+ F +  +++ FCK G+L  A E+F
Sbjct: 206 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 265

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
             M +    PD   Y  +I+  CRA R+D+A +LL+ M E GC  D+VT+N I+ GLC+ 
Sbjct: 266 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
            +++EA  + E L   G +L+  +   +++  C+   L+ A +LLR M   G  P     
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 385

Query: 453 NELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKL 500
             L+   CKA    D ++A F  +++ G  P   +++++++ +C+  ++
Sbjct: 386 TILIHGFCKADQL-DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 433



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 170/329 (51%), Gaps = 16/329 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  TY T+++   +    +    +  QM   +C      +  L+  +      E
Sbjct: 130 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCK---QE 186

Query: 148 RVLEMFHKIHPITRE--KPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPN 201
           R  +    +  + +   +P+    +T ++ L++S    +  +LAQ  L+        KP+
Sbjct: 187 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD-----CKPS 241

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              FN++I   CK G L+ A+E+ + M   +   P++ TY+ +I G C+  R  +A +L 
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMT-DRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           E M ++    PD +TYN ++ G C+  +VD A ++ E ++N G   +V   +TL++G CK
Sbjct: 301 ERM-TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             +L +A+++  EM+     PD + YT LI+ FC+A ++D++L    EM ++GC   ++T
Sbjct: 360 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 419

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGI 410
           ++I++  LC+  ++ +   +L+ +   G+
Sbjct: 420 YSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 1/229 (0%)

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N L+  F R  K   A  + +      C+P+   Y+TL+NGFCK    Q+A  + DEM+ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             + P    Y T+I   C  GRVD AL   ++M +R C   ++T+ I++  LC+  +I +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +LE +   G   N  +Y  ++N  C+ G +++A+ L   ML     P   T N L+ 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
             CK    +D A  L  +V+ G +P   ++  L++ + +  K + AF L
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL 229



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 9/201 (4%)

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++ F ++ K QEA ++F      L  PD+I Y+TLIN FC+A    +A  LL EM++RG
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA----SYRIVLNFSCQKGEL 430
                  +N I+ GLC  G+++ AL     + Y  +  + A    +Y I+++  C+   +
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSAL-----VHYRDMQRHCAPSVITYTILVDALCKSARI 118

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A  +L  M+  G  P+  T N L+   CK G  ++A +    ++E    P+  ++ +L
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178

Query: 491 VELICRGRKLLFAFELLDELV 511
           ++  C+  +     +LL E+V
Sbjct: 179 IDGYCKQERPQDGAKLLQEMV 199


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 180/312 (57%), Gaps = 5/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N++I   C+ G ++ A ++L  +  S    P+ ++Y+TL+ GLC + R+ +  E
Sbjct: 210 PNIVTYNVIINGMCREGRVDDARDLLNRLF-SYGCQPDTVSYTTLLKGLCASKRWDDVEE 268

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM+ K+  +P+ +T+++LI  FCRGG V+RA ++++ M  + C  N      ++N  
Sbjct: 269 LFAEMMEKN-CMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSI 327

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+G++ +A +  + M ++   PDTI YTT++   CRA R ++A ELLKEM    C  + 
Sbjct: 328 CKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE 387

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFN  +  LC++G IE+A+ ++E++   G  +   +Y  ++N  C +G ++ A+EL R 
Sbjct: 388 VTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 447

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M C+   P+  T   LL  LC A   + AA  +  ++     P   ++ +LV   C+   
Sbjct: 448 MPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGF 504

Query: 500 LLFAFELLDELV 511
           L  A EL+++++
Sbjct: 505 LDEAIELVEQMM 516



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 220/427 (51%), Gaps = 15/427 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  TY  I++ + R  + +    +L ++    C+     +  L+K        + 
Sbjct: 206 KGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDD 265

Query: 149 VLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           V E+F ++     EK   P+       +        V+ A   L+   +H     NT + 
Sbjct: 266 VEELFAEMM----EKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEH-ECATNTTLC 320

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           NI+I   CK+G ++ AF+ L  M  S    P+ I+Y+T++ GLC+  R+ +A EL +EMV
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMG-SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMV 379

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            ++   P+ +T+N  I   C+ G +++A  ++E M+ +GC   V  Y  L+NGFC +G +
Sbjct: 380 -RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHI 438

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A E+F  M     KP+TI YTTL+   C A R+D A EL+ EM  R C  ++VTFN++
Sbjct: 439 DSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVL 495

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +   C++G ++EA+ ++E++   G   N  +Y  + +   +    E A+ELL  ++ +G 
Sbjct: 496 VNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGV 555

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAF 504
            P   T + ++  L K    E+ AI +F L + +G +P++  +  ++  +C+  ++  A 
Sbjct: 556 SPDVITFSSIIGILSKEDRVEE-AIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAI 614

Query: 505 ELLDELV 511
           + L  +V
Sbjct: 615 DFLAYMV 621



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 214/424 (50%), Gaps = 13/424 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  +Y T+L  L   K+++ V+ +  +M  + C  +E  F  L++ F    + ER 
Sbjct: 242 GCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 301

Query: 150 LEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +++  ++     E       + C   +N + +  +VD A  FL     +    P+T  + 
Sbjct: 302 IQVLQQM----TEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSY-GCNPDTISYT 356

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            ++K  C+      A E+LKEM ++    PN +T++T I  LC+ G   +AI L E+M  
Sbjct: 357 TVLKGLCRAERWNDAKELLKEMVRNNCP-PNEVTFNTFICILCQKGLIEQAIMLIEQMQE 415

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
               +   +TYN L++GFC  G +D A   +E  ++  C PN   YTTL+ G C   +L 
Sbjct: 416 HGCTV-GVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLD 471

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A E+  EM +    P+ + +  L+N FC+ G +DEA+EL+++M E GC  +++T+N + 
Sbjct: 472 AAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLF 531

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G+ ++   E+AL +L  L   G+  +  ++  ++    ++  +E+AI++  L    G  
Sbjct: 532 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMR 591

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P     N++L+ LCK    ++A   L  +V  G  P   ++ +L+E + R   L  A +L
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDL 651

Query: 507 LDEL 510
           L  L
Sbjct: 652 LSML 655



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 168/318 (52%), Gaps = 2/318 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+   +  LI+  C RG +  A  +L +M + +   PN++TY+ L++ +CKN  F 
Sbjct: 136 MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR-RGCQPNVVTYTVLLEAMCKNSGFE 194

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ + +EM +K    P+ +TYNV+I+G CR G+VD A+ ++  + + GC P+  +YTTL
Sbjct: 195 QAMAVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTL 253

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   +  + +E+F EM      P+ + +  LI  FCR G V+ A+++L++M E  C
Sbjct: 254 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHEC 313

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +    NI++  +C++G++++A   L  +   G   +  SY  VL   C+      A E
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL+ M+     P+  T N  +  LC+ G+ E A + +  + E G      ++  LV   C
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFC 433

Query: 496 RGRKLLFAFELLDELVIK 513
               +  A EL   +  K
Sbjct: 434 VQGHIDSALELFRSMPCK 451



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 167/339 (49%), Gaps = 5/339 (1%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L  LI    +  A   ++ S       P+  +   LI++ C+RG    A  VL+  + S 
Sbjct: 46  LRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 105

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            S  ++  Y+TL+ G C+ G    A  L   M     + PDA TY  LI   C  G+V  
Sbjct: 106 -SPVDVFAYNTLVAGYCRYGHLDAARRLIGSM----PVAPDAYTYTPLIRVLCDRGRVAD 160

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A  +++ M   GC PNV  YT L+   CK    ++A  V DEM+     P+ + Y  +IN
Sbjct: 161 ALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 220

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             CR GRVD+A +LL  +   GC+ D V++  +L GLC   + ++   +  ++       
Sbjct: 221 GMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP 280

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N+ ++ +++ F C+ G +E+AI++L+ M       +    N ++  +CK G  +DA   L
Sbjct: 281 NEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFL 340

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             +   G  P++ S+  +++ +CR  +   A ELL E+V
Sbjct: 341 NNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMV 379



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 166/306 (54%), Gaps = 5/306 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+  +C+ G L++A  ++  M  +    P+  TY+ LI  LC  GR  +A+ L ++M
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIGSMPVA----PDAYTYTPLIRVLCDRGRVADALSLLDDM 168

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + +    P+ +TY VL++  C+    ++A  +++ M+  GC PN+  Y  ++NG C+EG+
Sbjct: 169 LRRG-CQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 227

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A+++ + + ++  +PDT+ YTTL+   C + R D+  EL  EM E+ C  + VTF++
Sbjct: 228 VDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 287

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   CR G +E A+ +L+++       N     IV+N  C++G ++ A + L  M   G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   +   +L  LC+A    DA   L  +V     P   ++   + ++C+   +  A 
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 407

Query: 505 ELLDEL 510
            L++++
Sbjct: 408 MLIEQM 413



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 3/261 (1%)

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L E   S+D   PD      LI   CR G+   A +++   + +G   +VF Y TL+
Sbjct: 58  AARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 117

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            G+C+ G L  A+ +   M    + PD   YT LI   C  GRV +AL LL +M  RGC+
Sbjct: 118 AGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 174

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++VT+ ++L  +C+    E+A+ +L+++   G   N  +Y +++N  C++G ++ A +L
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDL 234

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  +   G  P   +   LL  LC +   +D       ++E    P   ++ +L+   CR
Sbjct: 235 LNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCR 294

Query: 497 GRKLLFAFELLDELVIKESGT 517
           G  +  A ++L ++   E  T
Sbjct: 295 GGMVERAIQVLQQMTEHECAT 315



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 159/323 (49%), Gaps = 11/323 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G N +  +Y T+L  L R +++     +L++M    C  +E  F   +       L E+ 
Sbjct: 347 GCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQA 406

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + +  ++  H  T    +  A+   +N       +D A    +     +  KPNT  +  
Sbjct: 407 IMLIEQMQEHGCTVGVVTYNAL---VNGFCVQGHIDSALELFR----SMPCKPNTITYTT 459

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C    L++A E++ EM       PN++T++ L++  C+ G   EAIEL E+M+ +
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCP-PNVVTFNVLVNFFCQKGFLDEAIELVEQMM-E 517

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               P+ +TYN L DG  +    + A +++  + + G +P+V  +++++    KE +++E
Sbjct: 518 HGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEE 577

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++F   ++  ++P  + Y  ++   C+   +D A++ L  M   GC  +  T+ I++ 
Sbjct: 578 AIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIE 637

Query: 388 GLCREGKIEEALGMLEKLWYDGI 410
           GL REG ++EA  +L  L   G+
Sbjct: 638 GLAREGLLKEAQDLLSMLCSRGV 660


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 207/417 (49%), Gaps = 32/417 (7%)

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
           F +  F +L+ HFS  +L   +L +F  ++      P+    +  +  L     +  AQ 
Sbjct: 91  FFDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQR 150

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           +L    +    +P+   FN LI  +C+   LE A ++  +M     S  + ++Y+ LI+G
Sbjct: 151 YLSLMVRS-GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQ-DAVSYAALIEG 208

Query: 248 LCKNGRFREAIELFEEMVSKDQIL------------------------------PDALTY 277
            C+ GR  EA+ELF EM   D                                 P    Y
Sbjct: 209 FCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAY 268

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
             L+D +CR  K + A+KI+  M ++G  P V   T ++N +C+EG++  A  VF+ M+ 
Sbjct: 269 AALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRF 328

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +P+   Y  ++  FC AG+V +A+ LL +M+E G + D+VT+N+++ G C +G I  
Sbjct: 329 KGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGS 388

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L  +  +G+  ++ +Y ++++  C+ G++++A  L   +  RG  P+  T N ++ 
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVIN 448

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            LCKAG  + A   L  ++  G+ P++ +++  +E +C+ +        +DE++ K+
Sbjct: 449 GLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKD 505



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 197/433 (45%), Gaps = 8/433 (1%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           L +F  +          ATY  ++  L R          L  M     +     F +L+ 
Sbjct: 113 LRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
            +      E   ++F K+ P         + +  +    E+ ++D A    +   Q    
Sbjct: 173 GYCRTQQLEVAHDLFCKM-PFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ---- 227

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+      L+K  C  G  E    +L++MK+     P    Y+ L+D  C+  +  EA 
Sbjct: 228 -PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWR-PTTRAYAALVDLWCREQKAEEAE 285

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ++  EM     ++P  +T  ++++ +CR G++  A ++ E M+  GC PNV+ Y  ++ G
Sbjct: 286 KILNEMFDSG-LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQG 344

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FC  GK+ +A  + D+M+   ++PD + Y  LI   C  G +  A  LL+ M+  G  AD
Sbjct: 345 FCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAAD 404

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+N+++  LC+ GK++EA  + + L Y GI  N  ++  V+N  C+ G+ + A   L 
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLE 464

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G+ P   T +  +  LCK   +++    +  +++   KP + ++ +++  +   R
Sbjct: 465 NMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNER 524

Query: 499 KLLFAFELLDELV 511
               A  +  ++V
Sbjct: 525 NYGLATRIWGQMV 537



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 180/382 (47%), Gaps = 12/382 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF+ +  +YA +++      + +    + R+MT      H      L+K   +    E 
Sbjct: 193 RGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAA----LVKGLCDAGRGEE 248

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFN 206
            L M  K+  +   +P+ +A +  ++L     + + A+  L   N+     L P      
Sbjct: 249 GLCMLQKMKELGW-RPTTRAYAALVDLWCREQKAEEAEKIL---NEMFDSGLMPCVVTCT 304

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           I++  +C+ G +  A  V + M+      PN+ TY+ ++ G C  G+  +A+ L ++M  
Sbjct: 305 IVVNAYCREGRMSGAVRVFESMRFKGCE-PNVWTYNAIVQGFCNAGKVYKAMALLDQM-R 362

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  + PD +TYN+LI G C  G +  A +++  M+ NG   + + Y  L++  CK GK+ 
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +FD ++   ++P+++ + T+IN  C+AG+ D A   L+ M   G   D  T++  +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC+    +E L  ++++    +  +  +Y IV+N    +     A  +   M+ +G  
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCS 542

Query: 447 PHYATSNELLVRLCKAGMAEDA 468
           P   T    +   C  G  ++A
Sbjct: 543 PDVVTYTTSVRAYCNEGRLDEA 564



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 172/365 (47%), Gaps = 10/365 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQM---TYETCKFHEGIFLNLMKHFSNCSLH 146
           G+      YA ++D   R +K E  + +L +M       C     I +N        S  
Sbjct: 260 GWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGA 319

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            RV E           +P++   +  +     + +V  A   L    +   ++P+   +N
Sbjct: 320 VRVFESMR----FKGCEPNVWTYNAIVQGFCNAGKVYKAMALLD-QMRECGVEPDVVTYN 374

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +LI+  C  G + SAF +L+ M+ + ++  +  TY+ LID LCK G+  EA  LF+ +  
Sbjct: 375 LLIRGQCIDGHIGSAFRLLRLMEGNGLA-ADQYTYNVLIDALCKTGKVDEACSLFDGLEY 433

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I P+++T+N +I+G C+ GK D A   +E M + G  P+ + Y+  +   CK    Q
Sbjct: 434 RG-IRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQ 492

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           E     DEM    +KP T+ YT +IN          A  +  +M  +GC  D+VT+   +
Sbjct: 493 EGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSV 552

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
              C EG+++EA  ++ ++      ++  +Y  +++     G+ ++A+ +L+ M     +
Sbjct: 553 RAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASM 612

Query: 447 PHYAT 451
           P++ T
Sbjct: 613 PNHFT 617



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 149/362 (41%), Gaps = 58/362 (16%)

Query: 162 EKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           E   L A     N+LI+    + +VD A +      ++  ++PN+  FN +I   CK G 
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFD-GLEYRGIRPNSVTFNTVINGLCKAGK 455

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            + A   L+ M  +  + P+  TYS  I+ LCK    +E +   +EM+ KD + P  + Y
Sbjct: 456 FDVACTFLENMISAGYA-PDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKD-VKPSTVNY 513

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
            ++I+          A +I   M + GC+P+V  YTT +  +C EG+L EA+ V  EMK 
Sbjct: 514 TIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKK 573

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI------------- 384
                D + Y TLI+     G+ D A+ +LK M       +  TF I             
Sbjct: 574 CRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEH 633

Query: 385 --------------------------------------ILGGLCREGKIEEALGMLEKLW 406
                                                 IL G   E +++E   ++  + 
Sbjct: 634 VPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMK 693

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
            + + LN+  Y  ++N  C+      A  LL  M+  GFLP+      LL  L   G A+
Sbjct: 694 EENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQAD 753

Query: 467 DA 468
            A
Sbjct: 754 RA 755



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 152/382 (39%), Gaps = 90/382 (23%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK-RGTLESA 221
           +P+    +T +N L ++ + D+A  FL+ +       P+T  ++  I++ CK +G+ E  
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLE-NMISAGYAPDTYTYSPFIENLCKTKGSQEGL 495

Query: 222 F---EVL-KEMKKSQMSY-----------------------------PNLITYSTLIDGL 248
           F   E+L K++K S ++Y                             P+++TY+T +   
Sbjct: 496 FFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAY 555

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C  GR  EA  +  EM  K + + DA+ YN LIDG    G+ DRA  I++ M      PN
Sbjct: 556 CNEGRLDEAENVVTEM-KKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN 614

Query: 309 VFN---------------------------------------------------YTTLMN 317
            F                                                    Y +++ 
Sbjct: 615 HFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILE 674

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF +E +L E   +   MK   L  +   Y  L+NCFC+     +A  LL  M   G   
Sbjct: 675 GFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLP 734

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE---KAI 434
           +++ +  +L GL  EG+ + A  +     +     ++  ++++++   +KG  +     I
Sbjct: 735 NLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMI 794

Query: 435 ELLRLMLCRGFLPHYATSNELL 456
            +L  M C+     YA   E L
Sbjct: 795 SMLEQMKCKPSDETYAMLTEEL 816


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 173/315 (54%), Gaps = 2/315 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + ++PN   +N LI   C+RG +  A  VL +M   +   P+++TY+ L++  CK   +R
Sbjct: 161 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDML-CRGCAPDVVTYNILLEATCKGRGYR 219

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+EL + ++  +   P+ +TYNVL+DG C  G VD A +++  + ++GC P+  NY T+
Sbjct: 220 QAMELID-LMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 278

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   +  +A E+  EM      P+   +  +I   CR G + +A++LL++M + GC
Sbjct: 279 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 338

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
            A+IVT+N I+ GLC +  ++ A+G+L K+   G   +  +Y  +L   C   +   A E
Sbjct: 339 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+  M   G LP   T N L+  LC+ G+  DA      + + G  P S +++ ++  + 
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458

Query: 496 RGRKLLFAFELLDEL 510
           +  KL  A EL +E+
Sbjct: 459 KATKLDQALELFNEM 473



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 164/309 (53%), Gaps = 5/309 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  L   +C+ G L  A  V+  M       PN  TY+ LI  LC+ G+ R+A+ + ++M
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGMPVQ----PNAYTYNPLIHTLCERGQVRDALSVLDDM 193

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + +    PD +TYN+L++  C+G    +A ++++ M+  GC PN   Y  LM+G C EG 
Sbjct: 194 LCRG-CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD 252

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A E+   + +   KP T+ Y T++   C A R  +A EL+ EM    C  +  TFN+
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 312

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR+G +++A+ +LEK+   G   N  +Y  ++N  C++  ++ A+ LL  M   G
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N LL  LC A    DA   +  + + G  P++ ++  L+  +C+   ++ A 
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 432

Query: 505 ELLDELVIK 513
           E+  ++  K
Sbjct: 433 EVFKQMPDK 441



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 176/335 (52%), Gaps = 4/335 (1%)

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
             VD A   L+    H   KP+T  +N ++K  C       A E++ EM +     PN  
Sbjct: 251 GDVDDALELLRNLPSH-GCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP-PNEA 308

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T++ +I  LC+ G  ++AI+L E+M SK     + +TYN +I+G C    VD A  ++  
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKM-SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSK 367

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           MK+ GC P++  Y TL+ G C   +  +A+E+ D M      PD + + TLI   C+ G 
Sbjct: 368 MKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL 427

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           + +A+E+ K+M ++GC  + +T++ I+ GL +  K+++AL +  ++ + G   +K  Y++
Sbjct: 428 MVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQL 486

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +         +E+AI+ +R +   G  PH    N +L+ LC+ G  E A   +  +V  G
Sbjct: 487 LAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSG 546

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             P+  ++ +L+E +     L  A ELL +L  ++
Sbjct: 547 CMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD 581



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 189/384 (49%), Gaps = 14/384 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+ + +  + G   NN TY  ++D +      +    +LR +    CK     +  ++
Sbjct: 221 AMELIDLMRAE-GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 279

Query: 138 KHFSNC----SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           K   +        E V EM  +  P      ++   S C   L++      A   L+  +
Sbjct: 280 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ-----AIQLLEKMS 334

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +H     N   +N +I   C++  ++ A  +L +MK S    P+++TY+TL+ GLC   +
Sbjct: 335 KH-GCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK-SYGCKPDIVTYNTLLKGLCSAAQ 392

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           + +A EL + M +++  LPD +T+N LI   C+ G +  A ++ + M + GC PN   Y+
Sbjct: 393 WVDAEELMDNM-TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 451

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T+++G  K  KL +A E+F+EM +    PD I Y  L  C      ++EA++ ++++++ 
Sbjct: 452 TIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDS 510

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G     V +N IL GLCR GK E A+ ++  +   G   +  +Y I++     +G L +A
Sbjct: 511 GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 570

Query: 434 IELLRLMLCRGFLPHYATSNELLV 457
            ELL  +  R  L +    +E L+
Sbjct: 571 RELLIKLCSRDVLVNSLIKSEALL 594



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 46/332 (13%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           RG L++A  +++   +     P+    + L+  LC+ GR  +A    E +V         
Sbjct: 84  RGDLDAALRLVESSPRP----PDAALANRLVRDLCRRGRPDDA----ERVVGACGPAATV 135

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           + Y  L DG+CR G++  A++++  M      PN + Y  L++  C+ G++++A  V D+
Sbjct: 136 VAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDD 192

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M      PD + Y  L+   C+     +A+EL+  M+  GC  + VT+N+++ G+C EG 
Sbjct: 193 MLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD 252

Query: 395 IEEALGMLEKL------------------------WYDGIYL-----------NKASYRI 419
           +++AL +L  L                        W D   L           N+A++ +
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 312

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V+   C+KG L++AI+LL  M   G   +  T N ++  LC+    + A   L  +   G
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
            KP+  ++  L++ +C   + + A EL+D + 
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMT 404


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 167/288 (57%), Gaps = 2/288 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LIK +CK G    A  +  EM +  ++ P++ITY++LI  +CK G    A+E  ++M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEFLDQM 371

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  + P+  TY  L+DGF + G ++ A +++  M +NG +P+V  Y  L+NG C  GK
Sbjct: 372 RVRG-LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +++A  V ++MK   L PD + Y+T+++ FCR+  VDEAL + +EM E+G K D +T++ 
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C + + +EA  + E++   G+  ++ +Y  ++N  C +G+LEKA++L   M+ +G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
            LP   T + L+  L K     +A   L  L      P   ++  L+E
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 217/428 (50%), Gaps = 34/428 (7%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  +Y  +++ L R  + + V  VL +M        E  +  L+K +       +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 149 VLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTC 203
            L M  ++  H +T   PS+   ++ ++ + ++  ++ A  FL      +R++   PN  
Sbjct: 329 ALVMHAEMLRHGLT---PSVITYTSLIHSMCKAGNMNRAMEFL----DQMRVRGLCPNER 381

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +  L+    ++G +  A+ VL+EM  +  S P+++TY+ LI+G C  G+  +AI + E+
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFS-PSVVTYNALINGHCVTGKMEDAIAVLED 440

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  K  + PD ++Y+ ++ GFCR   VD A ++   M   G  P+   Y++L+ GFC++ 
Sbjct: 441 MKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           + +EA ++++EM    L PD   YT LIN +C  G +++AL+L  EM E+G   D+VT++
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GL ++ +  EA  +L KL+Y+    +  +Y  ++  +C   E +  + L++     
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE-NCSNIEFKSVVSLIK----- 613

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           GF              C  GM  +A      ++    KP+  ++ +++   CR   +  A
Sbjct: 614 GF--------------CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659

Query: 504 FELLDELV 511
           + L  E+V
Sbjct: 660 YTLYKEMV 667



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 211/431 (48%), Gaps = 42/431 (9%)

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLI 177
           Q TY+ C     +F  ++K +S  SL ++ L + H  + H      P + + +  L+  I
Sbjct: 124 QETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFM---PGVLSYNAVLDATI 180

Query: 178 ESNQ-VDLAQNFLK-----------------------YSNQHLRLK-----------PNT 202
            S + +  A+N  K                         N  + L            PN 
Sbjct: 181 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N LI  +CK   ++  F++L+ M    +  PNLI+Y+ +I+GLC+ GR +E   +  
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE-PNLISYNVVINGLCREGRMKEVSFVLT 299

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM  +   L D +TYN LI G+C+ G   +A  +   M  +G  P+V  YT+L++  CK 
Sbjct: 300 EMNRRGYSL-DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G +  A E  D+M+   L P+   YTTL++ F + G ++EA  +L+EM + G    +VT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++ G C  GK+E+A+ +LE +   G+  +  SY  VL+  C+  ++++A+ + R M+ 
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G  P   T + L+   C+    ++A      ++ +G  P+  ++  L+   C    L  
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538

Query: 503 AFELLDELVIK 513
           A +L +E+V K
Sbjct: 539 ALQLHNEMVEK 549



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 171/318 (53%), Gaps = 2/318 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+PN   +N++I   C+ G ++    VL EM +   S    +TY+TLI G CK G F +A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE-VTYNTLIKGYCKEGNFHQA 329

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + +  EM+ +  + P  +TY  LI   C+ G ++RA + ++ M+  G  PN   YTTL++
Sbjct: 330 LVMHAEML-RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF ++G + EA  V  EM +    P  + Y  LIN  C  G++++A+ +L++MKE+G   
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V+++ +L G CR   ++EAL +  ++   GI  +  +Y  ++   C++   ++A +L 
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             ML  G  P   T   L+   C  G  E A      +VE G  P+  ++++L+  + + 
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 498 RKLLFAFELLDELVIKES 515
            +   A  LL +L  +ES
Sbjct: 569 SRTREAKRLLLKLFYEES 586



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 169/316 (53%), Gaps = 5/316 (1%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR-FREAIEL 260
           + +F++++K + +   ++ A  ++  + ++    P +++Y+ ++D   ++ R    A  +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+EM+ + Q+ P+  TYN+LI GFC  G +D A  + + M+  GC PNV  Y TL++G+C
Sbjct: 193 FKEML-ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  K+ +  ++   M    L+P+ I Y  +IN  CR GR+ E   +L EM  RG   D V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N ++ G C+EG   +AL M  ++   G+  +  +Y  +++  C+ G + +A+E L  M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG  P+  T   L+    + G   +A   L  + + GF P   ++  L+   C   K+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431

Query: 501 LFAFELLDELVIKESG 516
             A  +L+++  KE G
Sbjct: 432 EDAIAVLEDM--KEKG 445


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 185/351 (52%), Gaps = 3/351 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    +T +     + +VD A+  +    +   LKPN   FN ++   CK G +E A +
Sbjct: 190 PNAVTYNTLVAAFCRAGEVDRAERLVDMMREG-GLKPNLVTFNSVVNGICKAGRMEDARK 248

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V  EM K  ++ P+ ++Y+TL+ G CK G   EA+ +F EM  K  I+PD +T+  LI  
Sbjct: 249 VFDEMVKEGLA-PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG-IMPDVVTFTSLIHV 306

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G ++RA  ++  M+  G   N   +T L++GFCK+G L +A     EM+   ++P 
Sbjct: 307 MCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPS 366

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  LIN +C  GR+DEA EL++EM+ +G K D+VT++ IL   C+ G    A  + +
Sbjct: 367 VVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQ 426

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  +G+  +  +Y  ++   C++  L  A  L + M+  G  P   T   L+   CK G
Sbjct: 427 QMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEG 486

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             E A      +V+ G  P+  ++++L+  + +  +   A  LL +L  +E
Sbjct: 487 NVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 178/314 (56%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +NIL++  C RG  + A  VL++M+ +    PN +TY+TL+   C+ G    A
Sbjct: 153 VAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCD-PNAVTYNTLVAAFCRAGEVDRA 211

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E   +M+ +  + P+ +T+N +++G C+ G+++ A+K+ + M   G  P+  +Y TL+ 
Sbjct: 212 -ERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVG 270

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK G   EA  VF EM    + PD + +T+LI+  C+AG ++ A+ L++EM+ERG + 
Sbjct: 271 GYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQM 330

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + +TF  ++ G C++G +++AL  + ++    I  +   Y  ++N  C  G +++A EL+
Sbjct: 331 NEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELV 390

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R M  +G  P   T + +L   CK G    A      ++E G  P++ +++ L+ ++C  
Sbjct: 391 REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEE 450

Query: 498 RKLLFAFELLDELV 511
           ++L  A  L   ++
Sbjct: 451 KRLGDAHVLFKNMI 464



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 171/304 (56%), Gaps = 6/304 (1%)

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
            +L SA      M    ++ PN+ TY+ L+  LC  G  +EA+ +  +M       P+A+
Sbjct: 136 ASLPSARRFFDSMLSDGVA-PNVYTYNILVRALCGRGHRKEALSVLRDMRGAG-CDPNAV 193

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYN L+  FCR G+VDRA+++++ M+  G  PN+  + +++NG CK G++++A++VFDEM
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
               L PD + Y TL+  +C+ G   EAL +  EM  +G   D+VTF  ++  +C+ G +
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNL 313

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM-LCRGFLPHYATSNE 454
           E A+G++ ++   G+ +N+ ++  +++  C+KG L+ A+  +R M  CR   P     N 
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR-IQPSVVCYNA 372

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           L+   C  G  ++A   +  +   G KP+  +++ ++   C+      AF+L  +++  E
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML--E 430

Query: 515 SGTI 518
           +G +
Sbjct: 431 NGVL 434



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 207/421 (49%), Gaps = 23/421 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  T+ ++++ + +  + E    V  +M  E        +  L+  +       
Sbjct: 220 EGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH 279

Query: 148 RVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
             L +F ++   TR+   P +   ++ ++++ ++  ++ A   ++   +   L+ N   F
Sbjct: 280 EALSVFAEM---TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRER-GLQMNEITF 335

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   CK+G L+ A   ++EM++ ++  P+++ Y+ LI+G C  GR  EA EL  EM 
Sbjct: 336 TALIDGFCKKGFLDDALLAVREMRQCRIQ-PSVVCYNALINGYCMVGRMDEARELVREME 394

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +K  + PD +TY+ ++  +C+ G    A ++ + M  NG  P+   Y++L+   C+E +L
Sbjct: 395 AKG-VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            +A  +F  M +  L+PD + YT+LI+  C+ G V+ AL L  EM + G   D+VT++++
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513

Query: 386 LGGLCREGKIEEALGMLEKLW----------YDGIY--LNKASYRIVLNFS---CQKGEL 430
           + GL +  + +EA  +L KL+          YD +      A  + VL      C KG +
Sbjct: 514 INGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLM 573

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            +A ++ + +L R +    +  + L+   C+ G    A      +++ GF P S S   L
Sbjct: 574 NEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISL 633

Query: 491 V 491
           +
Sbjct: 634 I 634



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 149/278 (53%), Gaps = 2/278 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+++ Y+ ++  L  +     A   F+ M+S D + P+  TYN+L+   C  G    A  
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLS-DGVAPNVYTYNILVRALCGRGHRKEALS 178

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M+  GC+PN   Y TL+  FC+ G++  A+ + D M+   LKP+ + + +++N  C
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +AGR+++A ++  EM + G   D V++N ++GG C+ G   EAL +  ++   GI  +  
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  +++  C+ G LE+A+ L+R M  RG   +  T   L+   CK G  +DA +A+  +
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +   +P    +  L+   C   ++  A EL+ E+  K
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAK 396



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 193/400 (48%), Gaps = 28/400 (7%)

Query: 69  IKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF 128
           + C  E   AL +F  ++ +KG   +  T+ +++  + +    E    ++R+M     + 
Sbjct: 275 VGCSHE---ALSVFAEMT-RKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQM 330

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
           +E  F  L+  F      +  L    ++    R +PS+   +  +N      ++D A+  
Sbjct: 331 NEITFTALIDGFCKKGFLDDALLAVREMRQ-CRIQPSVVCYNALINGYCMVGRMDEAREL 389

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           ++   +   +KP+   ++ ++  +CK G   SAF++ ++M ++ +  P+ ITYS+LI  L
Sbjct: 390 VR-EMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV-LPDAITYSSLIRVL 447

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C+  R  +A  LF+ M+S   + PD +TY  LIDG C+ G V+RA  + + M   G  P+
Sbjct: 448 CEEKRLGDAHVLFKNMISLG-LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPD 506

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           V  Y+ L+NG  K  + +EA+ +  ++ +    P  I Y  L+ C CR   +   L LLK
Sbjct: 507 VVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC-CRNAELKSVLALLK 565

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
                              G C +G + EA  + + +      L+ + Y ++++  C++G
Sbjct: 566 -------------------GFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREG 606

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            + KA+   + ML  GF P+  ++  L+  L + GM  +A
Sbjct: 607 NVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEA 646


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 174/316 (55%), Gaps = 2/316 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L ++P++  F  LI   C  G ++ A E+  EM     + PN +T++ L+D LCK G   
Sbjct: 150 LGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD-AMPNTVTFTILVDVLCKKGMVS 208

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA  +FE M  K  + P+  TYN L++G+C   +++ A K+ E M   GC P+V +Y+ L
Sbjct: 209 EARCVFETMTEKG-VEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSIL 267

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+CK  ++ EAK +  +M    L P+T+ Y TL+   C A  + EA EL K+M   G 
Sbjct: 268 INGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGM 327

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             ++ T++I+L GLC+ G +EEAL +L  +    +  +   Y I++      G+LE A E
Sbjct: 328 LPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKE 387

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   +   G  P   T N ++  L K G++++A      + + GF P+S S+ ++++   
Sbjct: 388 LFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFL 447

Query: 496 RGRKLLFAFELLDELV 511
           + +    A +L+DE+V
Sbjct: 448 QNQDPSTAIQLIDEMV 463



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 199/406 (49%), Gaps = 5/406 (1%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
           +    R  F+  G  +  I  +K+    + + N + +  G  HN+ T   +++ L R   
Sbjct: 78  IHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM-DLFGVAHNDYTLNILINSLCRLSH 136

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
                +VL +M     +     F  L+    N    +  +E+F+++       P+    +
Sbjct: 137 IHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAG-RDAMPNTVTFT 195

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
             +++L +   V  A+   +   +   ++PN   +N L+  +C R  +  A +V  E+  
Sbjct: 196 ILVDVLCKKGMVSEARCVFETMTEK-GVEPNIYTYNALMNGYCLRLEMNDASKVF-EIMV 253

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
            +   P++ +YS LI+G CK+ R  EA  L  +M S+ +++P+ +TYN L+ G C    +
Sbjct: 254 GKGCAPSVHSYSILINGYCKSRRIDEAKALLTQM-SEKELIPNTVTYNTLMQGLCHASSL 312

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
             A+++ + M ++G  PN+  Y+ L++G CK G L+EA ++   M+   L+PD + Y  L
Sbjct: 313 LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNIL 372

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I     AG+++ A EL  ++   G +  + T+NI++ GL +EG  +EA  +  K+  DG 
Sbjct: 373 IQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
             +  SY +++    Q  +   AI+L+  M+ R F    +T   LL
Sbjct: 433 LPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 138/275 (50%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+ +     +  + K  ++   + L  +M     +  +  T N+LI+  CR   +  A  
Sbjct: 84  PSFVELGKFLGSIAKKKQYSTVVSLCNQM-DLFGVAHNDYTLNILINSLCRLSHIHFAVS 142

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M   G  P+   +TTL+NG C EG+++EA E+F+EM      P+T+ +T L++  C
Sbjct: 143 VLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLC 202

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G V EA  + + M E+G + +I T+N ++ G C   ++ +A  + E +   G   +  
Sbjct: 203 KKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVH 262

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           SY I++N  C+   +++A  LL  M  +  +P+  T N L+  LC A    +A      +
Sbjct: 263 SYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKM 322

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              G  P   ++++L++ +C+   L  A +LL  +
Sbjct: 323 CSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSM 357



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 126/224 (56%), Gaps = 2/224 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   ++ILI  +CK   ++ A  +L +M + ++  PN +TY+TL+ GLC      EA E
Sbjct: 259 PSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL-IPNTVTYNTLMQGLCHASSLLEAQE 317

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF++M S   +LP+  TY++L+DG C+ G ++ A K++  M+     P++  Y  L+ G 
Sbjct: 318 LFKKMCSSG-MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGM 376

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
              GKL+ AKE+F ++    ++P    Y  +I    + G  DEA +L ++M++ G   D 
Sbjct: 377 FIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDS 436

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            ++N+I+ G  +      A+ +++++       + ++++++L+ 
Sbjct: 437 CSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDL 480



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 98/208 (47%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+       +    K+ +      + ++M  F +  +      LIN  CR   +  A+ +
Sbjct: 84  PSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSV 143

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M + G + D VTF  ++ GLC EG+I+EA+ +  ++       N  ++ I+++  C+
Sbjct: 144 LSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCK 203

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           KG + +A  +   M  +G  P+  T N L+   C      DA+     +V  G  P   S
Sbjct: 204 KGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHS 263

Query: 487 WALLVELICRGRKLLFAFELLDELVIKE 514
           +++L+   C+ R++  A  LL ++  KE
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKE 291



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 77/171 (45%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F  M +   +P  +     +    +  +    + L  +M   G   +  T NI
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR   I  A+ +L K++  GI  +  ++  ++N  C +G +++A+EL   M  R 
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            +P+  T   L+  LCK GM  +A      + E G +P   ++  L+   C
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYC 237


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 216/418 (51%), Gaps = 11/418 (2%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNCSLHERVLEM 152
           AT+ T+ D  A+  + E V  V + M    Y       GI ++ +    N    +   ++
Sbjct: 11  ATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN---FDEAYKL 67

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
            H +  + R K    A ST +N L + N+V+ A+  ++   ++    P+   +  +++  
Sbjct: 68  LHTMR-LKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA--PPDALTYGPIVERL 124

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK   ++ A   ++EM    +  P+   Y+ ++ GLC+  +  EA  LFE+MV K +I P
Sbjct: 125 CKTKRIDDALATVEEMATRGIK-PDAFIYNFVLSGLCQEEKVEEARLLFEKMV-KQRINP 182

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           + +TYN LI+G C+  +++ A ++ + M   G  P   +Y TL++GFCK+  L  AK+VF
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           D+M      P+ + YTTLI+   ++G+V  A E+L  M ++G   ++ T++ ++ G C+ 
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
            +++EA  +LE++   GI     +Y I+LN  C+  +LE A +L R M  R   P   T 
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           N LL  LC     + A      ++  G  P++ ++  L   + R  K+  A EL++++
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 169/317 (53%), Gaps = 3/317 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R K     ++ +I   CK   +E A E++++M  ++ + P+ +TY  +++ LCK  R  +
Sbjct: 75  RFKRKAIAYSTIINWLCKLNRVEEARELIEKM--ARYAPPDALTYGPIVERLCKTKRIDD 132

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+   EEM ++  I PDA  YN ++ G C+  KV+ A+ + E M     NPNV  Y TL+
Sbjct: 133 ALATVEEMATRG-IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 191

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG CK  +++ A E+F EM      P  + Y TLI+ FC+   +  A ++  +M    C 
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 251

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++VT+  ++ GL + GK++ A  +L+ +   G+  N A+Y  +++  C+   +++A +L
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M+ +G  P   T N LL  LC+A   EDA     G+ +    P   ++  L+  +C 
Sbjct: 312 LEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 371

Query: 497 GRKLLFAFELLDELVIK 513
            ++L  A  L  E++ K
Sbjct: 372 HKQLDGAHRLYAEMIAK 388



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 153/313 (48%), Gaps = 37/313 (11%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P   T++T+ DG  K GR  +  E+++ MV     L  A  Y +LI   C+ G  D A K
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTL-RASGYGILISCLCKVGNFDEAYK 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M+          Y+T++N  CK  +++EA+E+ ++M  +   PD + Y  ++   C
Sbjct: 67  LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERLC 125

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +  R+D+AL  ++EM  RG K D   +N +L GLC+E K+EEA  + EK+    I  N  
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC--------------- 460
           +Y  ++N  C+   +E A EL + M  +G++P   + N L+   C               
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 461 --------------------KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                               K+G  + AA  L G+V+ G  P   +++ L++  C+ R++
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 501 LFAFELLDELVIK 513
             A +LL+++V +
Sbjct: 306 DEAHKLLEQMVTQ 318



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 96/172 (55%), Gaps = 2/172 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  LI    K G +++A EVL  M K  ++ PN+ TYS LIDG CK  R  EA +
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT-PNVATYSCLIDGFCKVRRVDEAHK 310

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L E+MV++  I P  +TYN+L++  CR  K++ A K+   M    C+P V  Y TL+   
Sbjct: 311 LLEQMVTQG-IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           C   +L  A  ++ EM      PD I Y TL     RAG+V EA EL+++MK
Sbjct: 370 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 130/243 (53%), Gaps = 1/243 (0%)

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
           +++P A T+N + DGF + G++++ K++ + M   G       Y  L++  CK G   EA
Sbjct: 5   RVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEA 64

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++   M+    K   I Y+T+IN  C+  RV+EA EL+++M  R    D +T+  I+  
Sbjct: 65  YKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVER 123

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC+  +I++AL  +E++   GI  +   Y  VL+  CQ+ ++E+A  L   M+ +   P+
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N L+  LCKA   E A      +   G+ P   S+  L++  C+ + L+ A ++ D
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243

Query: 509 ELV 511
           ++V
Sbjct: 244 KMV 246



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 9/234 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           + A E+F  ++  KG+     +Y T++D   + K   A   V  +M    C  +   +  
Sbjct: 201 ETAYELFKEMA-GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259

Query: 136 LMKHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           L+   S     +   E+   +    +T   P++   S  ++   +  +VD A   L+   
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVT---PNVATYSCLIDGFCKVRRVDEAHKLLEQMV 316

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
               + P    +NIL+   C+   LE AF++ + M + +  +P ++TY+TL+  LC + +
Sbjct: 317 TQ-GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR-CHPTVVTYNTLLRALCHHKQ 374

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
              A  L+ EM++K    PDA+TY+ L  G  R GKV  A+++ME MK    NP
Sbjct: 375 LDGAHRLYAEMIAKG-CPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 181/322 (56%), Gaps = 6/322 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   ++IL+   CK G   SA  +L EM++   + PN++TYSTL+   C+NG + +A  
Sbjct: 346 PDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCA-PNIVTYSTLLHSFCRNGMWDDARA 404

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + ++M++K   + ++  YN +I   C+ GK+D+A ++++ MK+ GC P++  Y T++   
Sbjct: 405 MLDQMLAKGFSM-NSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHL 463

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C    ++EA+ +F  +    +  + I Y TLI+   R GR  E L L  EM   GC+ D+
Sbjct: 464 CNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDV 523

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++  LC+EG ++ ++ +LE++   GI  N  SY +++N  C+ G++  A+EL + 
Sbjct: 524 ISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 583

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML +G  P   T N L+  LCK G    A   L  L      P+  ++ +L+   C+ R 
Sbjct: 584 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 643

Query: 500 LLFAFELLDELVIKESGTIQVP 521
           L  A  LLD+ +   SG I VP
Sbjct: 644 LDDAAMLLDKAI---SGGI-VP 661



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 164/312 (52%), Gaps = 6/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  L++  C+    + A  +L  + +      N++  +T+I G    G+   A E
Sbjct: 280 PSVVTYGFLLQGLCRTRQADEACAMLGRLPEV-----NVVMLNTVIRGCLTEGKLARATE 334

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+E M SK    PD  TY++L+ G C+ G+   A ++++ M+  GC PN+  Y+TL++ F
Sbjct: 335 LYEMMGSKG-CPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSF 393

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G   +A+ + D+M       ++ GY  +I   C+ G++D+A  L++EMK +GCK DI
Sbjct: 394 CRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDI 453

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N ++  LC    +EEA  +   L  +G+  N  +Y  +++   + G  ++ + L   
Sbjct: 454 CTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASE 513

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML  G      + N L+  LCK G  + +   L  +V  G KP + S+ +L+  +C+  K
Sbjct: 514 MLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGK 573

Query: 500 LLFAFELLDELV 511
           +  A EL  E++
Sbjct: 574 VRDALELSKEML 585



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 157/290 (54%), Gaps = 7/290 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESA 221
           P++   ST L+    +   D A+  L   +Q L      N+  +N +I   CK G L+ A
Sbjct: 381 PNIVTYSTLLHSFCRNGMWDDARAML---DQMLAKGFSMNSQGYNGIIYALCKDGKLDQA 437

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +++EMK SQ   P++ TY+T+I  LC N    EA  +F  ++ ++ ++ + +TYN LI
Sbjct: 438 TRLVQEMK-SQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI-EEGVVANGITYNTLI 495

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
               R G+     ++   M  +GC  +V +Y  L+   CKEG +  +  + +EM    +K
Sbjct: 496 HALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIK 555

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+   Y  LIN  C+AG+V +ALEL KEM  +G   DIVT+N ++ GLC+ G    AL +
Sbjct: 556 PNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNL 615

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           LEKL  + ++ +  +Y I++++ C+   L+ A  LL   +  G +P+  T
Sbjct: 616 LEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERT 665



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 5/293 (1%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  +L +M +     P+  +Y+ ++  L +     +A+ L+  M+ +D++ P   T+ V 
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRML-RDRVPPTTFTFGVA 183

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
               CR G+   A  ++  M  +GC P+   Y T+++    +G + EA  + DEM     
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
             D   +  L+   C  GRV EA  L+  M  +GC   +VT+  +L GLCR  + +EA  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           ML +L      +N      V+     +G+L +A EL  +M  +G  P   T + L+  LC
Sbjct: 304 MLGRL----PEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           K G    A   L  + E G  P   +++ L+   CR      A  +LD+++ K
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAK 412



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 134/306 (43%), Gaps = 43/306 (14%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF+ N+  Y  I+  L +  K +    ++++M  + CK     +  ++ H  N  L E 
Sbjct: 412 KGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEE 471

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              +F                      LIE   V                  N   +N L
Sbjct: 472 AEHIFRN--------------------LIEEGVV-----------------ANGITYNTL 494

Query: 209 IKHHCKRGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           I    + G  +    +  EM     Q+   ++I+Y+ LI  LCK G    ++ L EEMV+
Sbjct: 495 IHALLRNGRWQEGLRLASEMLLHGCQL---DVISYNGLIKALCKEGNVDRSMALLEEMVT 551

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  I P+  +YN+LI+  C+ GKV  A ++ + M N G  P++  Y TL+NG CK G   
Sbjct: 552 KG-IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 610

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A  + +++ N  + PD + Y  LI+  C+   +D+A  LL +    G   +  T+ +++
Sbjct: 611 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMV 670

Query: 387 GGLCRE 392
               R+
Sbjct: 671 QNFVRQ 676


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 174/313 (55%), Gaps = 2/313 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +N LI    K G +E A+    EMK+ Q    N++T+ST +D  CK G  +EA++L
Sbjct: 269 DVVTYNALINCFSKFGRMEKAYSYFGEMKR-QGVVANVVTFSTFVDAFCKEGLVQEAMKL 327

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M  +  ++P+  TY  L+DG C+ G++D A  +++ M + G  PNV  YT +++G C
Sbjct: 328 FAQMRVRG-MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC 386

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           KEGK+ EA  V   M+   +K + + YTTLI+        + AL+LL +MK +G + D+ 
Sbjct: 387 KEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVS 446

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +  ++ GLC++ K++EA  +L K+   G+  N   Y  +++   + G+  +A+ LL  +
Sbjct: 447 LYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKI 506

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L  GF P+  T   L+  LCKAG   +A      + E+G  P   ++  L++  C+   L
Sbjct: 507 LDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSL 566

Query: 501 LFAFELLDELVIK 513
             A  L++E++ K
Sbjct: 567 NKAMHLMNEMIDK 579



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 169/312 (54%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FNI+I   CK G L  A  +   MK    S P+++TY++LIDG  K G   E  +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCS-PDVVTYNSLIDGYGKCGDLEEVEQ 256

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  K     D +TYN LI+ F + G++++A      MK  G   NV  ++T ++ F
Sbjct: 257 LVSEM-RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAF 315

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG +QEA ++F +M+   + P+   YT+L++  C+AGR+D+A+ LL EM  +G   ++
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+ +++ GLC+EGK+ EA  +L  +   G+  N+  Y  +++        E+A++LL  
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +G     +    L+  LCK    ++A   L  +   G +P +  +  +++ + +  K
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495

Query: 500 LLFAFELLDELV 511
              A  LL +++
Sbjct: 496 ESEAVALLHKIL 507



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 37/346 (10%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   F+  +   CK G ++ A ++  +M+   M  PN  TY++L+DG CK GR  +AI L
Sbjct: 304 NVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGM-MPNEFTYTSLVDGTCKAGRLDDAIVL 362

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG-- 318
            +EMV +  ++P+ +TY V++DG C+ GKV  A  ++  M+  G   N   YTTL++G  
Sbjct: 363 LDEMVHQG-LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHF 421

Query: 319 ---------------------------------FCKEGKLQEAKEVFDEMKNFLLKPDTI 345
                                             CK+ K+ EAK +  +M    L+P+T+
Sbjct: 422 MNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTV 481

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            YTT+++   +AG+  EA+ LL ++ + G + ++VT+  ++ GLC+ G I EA+    K+
Sbjct: 482 IYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM 541

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+  N  +Y  +++  C+ G L KA+ L+  M+ +G          L+    K    
Sbjct: 542 RELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANL 601

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +DA      ++E G + +   +   +   C    +  A  +L E++
Sbjct: 602 QDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 647



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 147/265 (55%), Gaps = 6/265 (2%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           + + L+      G L+ A   L  +++ ++  PN  T + ++  L +N +      LF+ 
Sbjct: 136 VVDTLLSLLADHGLLDDAVRALARVRQLRVP-PNTRTCNHILLRLARNRQGGLVRRLFDL 194

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           +      +P+  T+N++ID  C+ G++  A+ +   MK  GC+P+V  Y +L++G+ K G
Sbjct: 195 LP-----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 249

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            L+E +++  EM+      D + Y  LINCF + GR+++A     EMK +G  A++VTF+
Sbjct: 250 DLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFS 309

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
             +   C+EG ++EA+ +  ++   G+  N+ +Y  +++ +C+ G L+ AI LL  M+ +
Sbjct: 310 TFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 369

Query: 444 GFLPHYATSNELLVRLCKAGMAEDA 468
           G +P+  T   ++  LCK G   +A
Sbjct: 370 GLVPNVVTYTVMVDGLCKEGKVAEA 394



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 181/384 (47%), Gaps = 6/384 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS-L 145
           +++G   N  T++T +D   +    +    +  QM       +E  + +L+        L
Sbjct: 297 KRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 356

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            + ++ +   +H      P++   +  ++ L +  +V  A N L    +   +K N  ++
Sbjct: 357 DDAIVLLDEMVH--QGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG-GVKANELLY 413

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI  H      E A ++L +MK   M   ++  Y TLI GLCK+ +  EA  L  +M 
Sbjct: 414 TTLIHGHFMNNNSERALDLLNQMKNKGMEL-DVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
               + P+ + Y  ++D   + GK   A  ++  + ++G  PNV  Y  L++G CK G +
Sbjct: 473 GCG-LRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI 531

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA   F++M+   L P+   YT LI+ FC+ G +++A+ L+ EM ++G   D V +  +
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G  ++  +++A  +  K+   G+ L+   Y   ++  C    +++A  +L  M+  G 
Sbjct: 592 IDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 651

Query: 446 LPHYATSNELLVRLCKAGMAEDAA 469
            P     N L+ +  K G  E+A+
Sbjct: 652 TPDKTVYNCLIRKYQKLGNMEEAS 675



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 41/350 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-HFSNCSLH 146
            +G   N  TY  ++D L +  K    D VL  M     K +E ++  L+  HF N +  
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNN-S 426

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           ER L++ +++                                    N+ + L  +  ++ 
Sbjct: 427 ERALDLLNQM-----------------------------------KNKGMEL--DVSLYG 449

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   CK   ++ A  +L +M    +  PN + Y+T++D L K G+  EA+ L  +++ 
Sbjct: 450 TLIWGLCKDQKVDEAKSLLHKMAGCGLR-PNTVIYTTIMDALFKAGKESEAVALLHKILD 508

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                P+ +TY  LIDG C+ G +  A      M+  G +PNV  YT L++GFCK G L 
Sbjct: 509 SG-FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLN 567

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A  + +EM +  +  D + YT+LI+ + +   + +A  L  +M E G + D+  +   +
Sbjct: 568 KAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFI 627

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            G C    ++EA G+L ++   GI  +K  Y  ++    + G +E+A  L
Sbjct: 628 SGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSL 677



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 7/263 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ N + + KG   + + Y T++  L + +K +   ++L +M     + +  I+  +M
Sbjct: 429 ALDLLNQM-KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIM 487

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHL 196
                       + + HKI   +  +P++      ++ L ++  +  A  +F K   + L
Sbjct: 488 DALFKAGKESEAVALLHKILD-SGFQPNVVTYCALIDGLCKAGSISEAISHFNKM--REL 544

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            L PN   +  LI   CK G+L  A  ++ EM    MS   ++ Y++LIDG  K    ++
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVV-YTSLIDGYMKQANLQD 603

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L  +M+     L D   Y   I GFC    +  A+ ++  M   G  P+   Y  L+
Sbjct: 604 AFALKTKMIESGLQL-DLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662

Query: 317 NGFCKEGKLQEAKEVFDEMKNFL 339
             + K G ++EA  + +EM++ L
Sbjct: 663 RKYQKLGNMEEASSLQNEMESVL 685



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 43/241 (17%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+V +  TL++     G L +A      ++   + P+T    T  +   R  R  +   L
Sbjct: 134 PSVVD--TLLSLLADHGLLDDAVRALARVRQLRVPPNT---RTCNHILLRLARNRQG-GL 187

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALG-------------------------- 400
           ++ + +     ++ TFNI++  LC+EG++ EA                            
Sbjct: 188 VRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 247

Query: 401 ---------MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
                    ++ ++   G   +  +Y  ++N   + G +EKA      M  +G + +  T
Sbjct: 248 CGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVT 307

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +  +   CK G+ ++ A+ LF  + + G  P   ++  LV+  C+  +L  A  LLDE+
Sbjct: 308 FSTFVDAFCKEGLVQE-AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366

Query: 511 V 511
           V
Sbjct: 367 V 367


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 176/322 (54%), Gaps = 9/322 (2%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  + PN   FN ++   CKRG +  A  +L ++ +  MS  NL TY+  I GLC+ GR 
Sbjct: 180 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI-NLFTYNIWIRGLCEAGRL 238

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA+ L + M  +   +PD +TYN LI G C+      A   +  M N GC P+ F Y T
Sbjct: 239 PEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 296

Query: 315 LMNGFCKEGKLQEAKEVFDE--MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           +++G+CK   +QEA E+  +   K F+  PD + Y +LIN  C  G V+ ALEL  E + 
Sbjct: 297 IIDGYCKISMVQEATELLKDAVFKGFV--PDQVTYCSLINGLCAEGDVERALELFNEAQA 354

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G K DIV +N ++ GLC +G I  AL ++ ++  +G + +  +Y IV+N  C+ G +  
Sbjct: 355 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 414

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLV 491
           A  ++   + +G+LP   T N L+   CK  +  D+A+ L   + E G  P++ ++  ++
Sbjct: 415 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKR-LKLDSALQLVERMWEYGIAPDTITYNSVL 473

Query: 492 ELICRGRKLLFAFELLDELVIK 513
             +C+  K+    E   E+++K
Sbjct: 474 NGLCKAGKVNEVNETFQEMILK 495



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 190/382 (49%), Gaps = 39/382 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L A +  L+ L +   V  A   L    Q   +  N   +NI I+  C+ G L  A  
Sbjct: 185 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAGRLPEAVR 243

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++  M+    + P+++TY+TLI GLCK    +EA+     M+++   LPD  TYN +IDG
Sbjct: 244 LVDGMRA--YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG-CLPDDFTYNTIIDG 300

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+   V  A ++++     G  P+   Y +L+NG C EG ++ A E+F+E +   +KPD
Sbjct: 301 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPD 360

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG---------- 393
            + Y +L+   C  G +  AL+++ EM E GC  DI T+NI++ GLC+ G          
Sbjct: 361 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 420

Query: 394 -------------------------KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
                                    K++ AL ++E++W  GI  +  +Y  VLN  C+ G
Sbjct: 421 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 480

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           ++ +  E  + M+ +G  P+  T N L+   C++   E+A+  +  + + G  P++ S+ 
Sbjct: 481 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 540

Query: 489 LLVELICRGRKLLFAFELLDEL 510
            L+   CR   L  A+ L  +L
Sbjct: 541 TLIYGFCRNGDLEGAYLLFQKL 562



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 200/415 (48%), Gaps = 4/415 (0%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  L +    +     LR+M  + C   +  +  ++  +   S+ +   E+  K 
Sbjct: 258 TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL-KD 316

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P      + +N L     V+ A      + Q   +KP+  ++N L+K  C +G
Sbjct: 317 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA-QAKGIKPDIVVYNSLVKGLCLQG 375

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            +  A +V+ EM + +  +P++ TY+ +I+GLCK G   +A  +  + + K   LPD  T
Sbjct: 376 LILHALQVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG-YLPDVFT 433

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           +N LIDG+C+  K+D A +++E M   G  P+   Y +++NG CK GK+ E  E F EM 
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
                P+ I Y  LI  FCR+ +++EA +++ +M + G   D V+FN ++ G CR G +E
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A  + +KL   G      ++  ++     K  +  A ++   ML +G      T   L+
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              CK    + A + L  +++ GF P   ++  ++  +    ++  A  ++  +V
Sbjct: 614 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 668



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 169/314 (53%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  LI   C  G +E A E+  E +   +  P+++ Y++L+ GLC  G    A++
Sbjct: 324 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK-PDIVVYNSLVKGLCLQGLILHALQ 382

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  EM +++   PD  TYN++I+G C+ G +  A  +M      G  P+VF + TL++G+
Sbjct: 383 VMNEM-AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  KL  A ++ + M  + + PDTI Y +++N  C+AG+V+E  E  +EM  +GC  + 
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 501

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+NI++   CR  K+EEA  ++ K+  +G++ +  S+  ++   C+ G+LE A  L + 
Sbjct: 502 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 561

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +  +G+     T N L+           A      ++  G + +S ++ +L++  C+   
Sbjct: 562 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 621

Query: 500 LLFAFELLDELVIK 513
           +  A+  L E++ K
Sbjct: 622 VDRAYMHLVEMIKK 635



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 226/459 (49%), Gaps = 26/459 (5%)

Query: 71  CEKE-PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           C+K  PQ A+     +  Q G   ++ TY TI+D   +    +    +L+   ++     
Sbjct: 267 CKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 325

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST-----CLN-LLIESNQVD 183
           +  + +L+         ER LE+F++       KP +   ++     CL  L++ + QV 
Sbjct: 326 QVTYCSLINGLCAEGDVERALELFNEAQA-KGIKPDIVVYNSLVKGLCLQGLILHALQV- 383

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE-MKKSQMSYPNLITYS 242
              N +     H    P+   +NI+I   CK G +  A  V+ + + K  +  P++ T++
Sbjct: 384 --MNEMAEEGCH----PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL--PDVFTFN 435

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TLIDG CK  +   A++L E M     I PD +TYN +++G C+ GKV+   +  + M  
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYG-IAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 494

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            GC+PN   Y  L+  FC+  K++EA +V  +M    L PD + + TLI  FCR G ++ 
Sbjct: 495 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 554

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  L ++++E+G  A   TFN ++G    +  +  A  + +++   G   +  +YR++++
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 614

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
            SC+   +++A   L  M+ +GF+P  +T   ++  L        A   +  +V++G  P
Sbjct: 615 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           E     ++  ++   +K + A ++L E ++K+ G I  P
Sbjct: 675 E-----VVDTILNADKKEIAAPKILVEDLMKK-GHISYP 707



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 153/315 (48%), Gaps = 9/315 (2%)

Query: 197 RLKPNTC--IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           RL P T   ++   I+ + + G L  A +  + M       P    Y+ ++D L      
Sbjct: 44  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACP-PAAPAYNAIMDALVDAAYH 102

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A +++  M++   + PD  T+ + +  FC   +   A +++  + + G       Y T
Sbjct: 103 DQAHKVYVRMLAAG-VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCT 157

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G    G   +A+++FD+M +  + P+   +  +++  C+ G V EA  LL ++ +RG
Sbjct: 158 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 217

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++ T+NI + GLC  G++ EA+ +++ +    +  +  +Y  ++   C+K   ++A+
Sbjct: 218 MSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAM 276

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
             LR M+ +G LP   T N ++   CK  M ++A   L   V  GF P+  ++  L+  +
Sbjct: 277 HYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGL 336

Query: 495 CRGRKLLFAFELLDE 509
           C    +  A EL +E
Sbjct: 337 CAEGDVERALELFNE 351


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 176/322 (54%), Gaps = 9/322 (2%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  + PN   FN ++   CKRG +  A  +L ++ +  MS  NL TY+  I GLC+ GR 
Sbjct: 179 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI-NLFTYNIWIRGLCEAGRL 237

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA+ L + M  +   +PD +TYN LI G C+      A   +  M N GC P+ F Y T
Sbjct: 238 PEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 295

Query: 315 LMNGFCKEGKLQEAKEVFDE--MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           +++G+CK   +QEA E+  +   K F+  PD + Y +LIN  C  G V+ ALEL  E + 
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFV--PDQVTYCSLINGLCAEGDVERALELFNEAQA 353

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G K DIV +N ++ GLC +G I  AL ++ ++  +G + +  +Y IV+N  C+ G +  
Sbjct: 354 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 413

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLV 491
           A  ++   + +G+LP   T N L+   CK  +  D+A+ L   + E G  P++ ++  ++
Sbjct: 414 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKR-LKLDSALQLVERMWEYGIAPDTITYNSVL 472

Query: 492 ELICRGRKLLFAFELLDELVIK 513
             +C+  K+    E   E+++K
Sbjct: 473 NGLCKAGKVNEVNETFQEMILK 494



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 190/382 (49%), Gaps = 39/382 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L A +  L+ L +   V  A   L    Q   +  N   +NI I+  C+ G L  A  
Sbjct: 184 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAGRLPEAVR 242

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++  M+    + P+++TY+TLI GLCK    +EA+     M+++   LPD  TYN +IDG
Sbjct: 243 LVDGMRA--YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG-CLPDDFTYNTIIDG 299

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+   V  A ++++     G  P+   Y +L+NG C EG ++ A E+F+E +   +KPD
Sbjct: 300 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPD 359

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG---------- 393
            + Y +L+   C  G +  AL+++ EM E GC  DI T+NI++ GLC+ G          
Sbjct: 360 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 419

Query: 394 -------------------------KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
                                    K++ AL ++E++W  GI  +  +Y  VLN  C+ G
Sbjct: 420 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 479

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           ++ +  E  + M+ +G  P+  T N L+   C++   E+A+  +  + + G  P++ S+ 
Sbjct: 480 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 539

Query: 489 LLVELICRGRKLLFAFELLDEL 510
            L+   CR   L  A+ L  +L
Sbjct: 540 TLIYGFCRNGDLEGAYLLFQKL 561



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 200/415 (48%), Gaps = 4/415 (0%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  L +    +     LR+M  + C   +  +  ++  +   S+ +   E+  K 
Sbjct: 257 TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL-KD 315

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P      + +N L     V+ A      + Q   +KP+  ++N L+K  C +G
Sbjct: 316 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA-QAKGIKPDIVVYNSLVKGLCLQG 374

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            +  A +V+ EM + +  +P++ TY+ +I+GLCK G   +A  +  + + K   LPD  T
Sbjct: 375 LILHALQVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG-YLPDVFT 432

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           +N LIDG+C+  K+D A +++E M   G  P+   Y +++NG CK GK+ E  E F EM 
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
                P+ I Y  LI  FCR+ +++EA +++ +M + G   D V+FN ++ G CR G +E
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A  + +KL   G      ++  ++     K  +  A ++   ML +G      T   L+
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              CK    + A + L  +++ GF P   ++  ++  +    ++  A  ++  +V
Sbjct: 613 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 667



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 169/314 (53%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  LI   C  G +E A E+  E +   +  P+++ Y++L+ GLC  G    A++
Sbjct: 323 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK-PDIVVYNSLVKGLCLQGLILHALQ 381

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  EM +++   PD  TYN++I+G C+ G +  A  +M      G  P+VF + TL++G+
Sbjct: 382 VMNEM-AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  KL  A ++ + M  + + PDTI Y +++N  C+AG+V+E  E  +EM  +GC  + 
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 500

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+NI++   CR  K+EEA  ++ K+  +G++ +  S+  ++   C+ G+LE A  L + 
Sbjct: 501 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 560

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +  +G+     T N L+           A      ++  G + +S ++ +L++  C+   
Sbjct: 561 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 620

Query: 500 LLFAFELLDELVIK 513
           +  A+  L E++ K
Sbjct: 621 VDRAYMHLVEMIKK 634



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 226/459 (49%), Gaps = 26/459 (5%)

Query: 71  CEKE-PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           C+K  PQ A+     +  Q G   ++ TY TI+D   +    +    +L+   ++     
Sbjct: 266 CKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 324

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST-----CLN-LLIESNQVD 183
           +  + +L+         ER LE+F++       KP +   ++     CL  L++ + QV 
Sbjct: 325 QVTYCSLINGLCAEGDVERALELFNEAQA-KGIKPDIVVYNSLVKGLCLQGLILHALQV- 382

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE-MKKSQMSYPNLITYS 242
              N +     H    P+   +NI+I   CK G +  A  V+ + + K  +  P++ T++
Sbjct: 383 --MNEMAEEGCH----PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL--PDVFTFN 434

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TLIDG CK  +   A++L E M     I PD +TYN +++G C+ GKV+   +  + M  
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYG-IAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 493

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            GC+PN   Y  L+  FC+  K++EA +V  +M    L PD + + TLI  FCR G ++ 
Sbjct: 494 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 553

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  L ++++E+G  A   TFN ++G    +  +  A  + +++   G   +  +YR++++
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 613

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
            SC+   +++A   L  M+ +GF+P  +T   ++  L        A   +  +V++G  P
Sbjct: 614 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           E     ++  ++   +K + A ++L E ++K+ G I  P
Sbjct: 674 E-----VVDTILNADKKEIAAPKILVEDLMKK-GHISYP 706



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 153/315 (48%), Gaps = 9/315 (2%)

Query: 197 RLKPNTC--IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           RL P T   ++   I+ + + G L  A +  + M       P    Y+ ++D L      
Sbjct: 43  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACP-PAAPAYNAIMDALVDAAYH 101

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A +++  M++   + PD  T+ + +  FC   +   A +++  + + G       Y T
Sbjct: 102 DQAHKVYVRMLAAG-VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCT 156

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G    G   +A+++FD+M +  + P+   +  +++  C+ G V EA  LL ++ +RG
Sbjct: 157 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 216

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++ T+NI + GLC  G++ EA+ +++ +    +  +  +Y  ++   C+K   ++A+
Sbjct: 217 MSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAM 275

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
             LR M+ +G LP   T N ++   CK  M ++A   L   V  GF P+  ++  L+  +
Sbjct: 276 HYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGL 335

Query: 495 CRGRKLLFAFELLDE 509
           C    +  A EL +E
Sbjct: 336 CAEGDVERALELFNE 350


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 218/456 (47%), Gaps = 42/456 (9%)

Query: 60  ISHGAAISLIK----CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           ++H   ++LIK    CEKE    +  F+ + E  GF  N   Y+++L  LA+        
Sbjct: 121 VAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDL----- 175

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
             L  +TY   +  +G  + ++ +                               T +N 
Sbjct: 176 GFLAYVTYRRME-ADGFVVGMIDY------------------------------RTIVNA 204

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L ++   + A+ F+      +    ++ I   L+   C+   L  A +V   M K     
Sbjct: 205 LCKNGYTEAAEMFMS-KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCA 263

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN ++YS LI GLC+ GR  EA  L ++M  K    P   TY VLI   C  G +D+A  
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRGLIDKAFN 322

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M   GC PNV  YT L++G C++GK++EA  V  +M    + P  I Y  LIN +C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + GRV  A ELL  M++R CK ++ TFN ++ GLCR GK  +A+ +L+++  +G+  +  
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           SY ++++  C++G +  A +LL  M C    P   T   ++   CK G A+ A+  L  +
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  G   +  +   L++ +C+  K   A  +L+ LV
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 219/434 (50%), Gaps = 4/434 (0%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ +S++     N+ +Y+ ++  L    + E    +  QM  + C+     +  L+
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K   +  L ++   +F ++ P    KP++   +  ++ L    +++ A    +   +  R
Sbjct: 309 KALCDRGLIDKAFNLFDEMIP-RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-R 366

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N LI  +CK G +  AFE+L  M+K +   PN+ T++ L++GLC+ G+  +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEK-RACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L + M+  + + PD ++YNVLIDG CR G ++ A K++  M      P+   +T ++N
Sbjct: 426 VHLLKRMLD-NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            FCK+GK   A      M    +  D +  TTLI+  C+ G+  +AL +L+ + +     
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              + N+IL  L +  K++E L ML K+   G+  +  +Y  +++   + G++  +  +L
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            LM   G LP+      ++  LC+ G  E+A   L  + + G  P   ++ ++V+     
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 498 RKLLFAFELLDELV 511
            KL  A E +  +V
Sbjct: 665 GKLDRALETVRAMV 678



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 214/516 (41%), Gaps = 138/516 (26%)

Query: 82  FNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TY------ 123
           FN   E   +G   N  TY  ++D L R  K E  + V R+M          TY      
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380

Query: 124 -------------------ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-- 162
                                CK +   F  LM+         RV + +  +H + R   
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC------RVGKPYKAVHLLKRMLD 434

Query: 163 ---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
               P + + +  ++ L     ++ A   L   N    ++P+   F  +I   CK+G  +
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN-CFDIEPDCLTFTAIINAFCKQGKAD 493

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV-------------- 265
            A   L  M +  +S    +T +TLIDG+CK G+ R+A+ + E +V              
Sbjct: 494 VASAFLGLMLRKGISLDE-VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552

Query: 266 --------------------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
                               +K  ++P  +TY  L+DG  R G +  + +I+E MK +GC
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            PNV+ YT ++NG C+ G+++EA+++   M++  + P+ + YT ++  +   G++D ALE
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672

Query: 366 LLKEMKERG-----------------------------------------CKADIVTFNI 384
            ++ M ERG                                         C  ++++   
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732

Query: 385 ILGG------------LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            LGG            LC+EG+ +E+  +++ +   G++L KA   I++   C K +  K
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKA-MDIIMESYCSKKKHTK 791

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            +EL+ L+L  GF+P + +   ++  L K G AE A
Sbjct: 792 CMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 214/433 (49%), Gaps = 13/433 (3%)

Query: 88  QKGFNHNNAT-YATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           + G++ NN   +  +L  L   K+  EA D +LR+M    C  +   +  L+K   N   
Sbjct: 120 KTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKR 179

Query: 146 HERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL---RLKP 200
            E  LE+ H +         P++   +T ++ L ++  VD A+       QH+    ++P
Sbjct: 180 AEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVF----QHMIDKGVRP 235

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +  LI  +   G  +   ++L+EM    +  P+ + Y+ L+D LCKNGR  EA  +
Sbjct: 236 NNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ-PDCVIYAVLLDYLCKNGRCTEARNI 294

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+ ++ K  I P    Y +L+ G+   G +      ++ M  NG +P+   +  + N + 
Sbjct: 295 FDSLIRKG-IKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYA 353

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+  + EA  +FD+M+   L P  + Y  LI+  C+ GRVD+A+    +M   G   DI 
Sbjct: 354 KKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIF 413

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            F+ ++ GLC   K E+A  +  ++   GI LN A + I++   C++G + +A  L+ LM
Sbjct: 414 VFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLM 473

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L     P   + N L+   C  G  ++AA  L  +V +G KP+  ++  L+   C+ R++
Sbjct: 474 LRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRI 533

Query: 501 LFAFELLDELVIK 513
             A+ L  E+++K
Sbjct: 534 DDAYSLFREMLMK 546



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 162/310 (52%), Gaps = 4/310 (1%)

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           F +  +Q +RL  N   FNIL+ + C+ G +  A  ++  M +  +  P++I+Y+TL+DG
Sbjct: 435 FFEVLDQGIRL--NAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVR-PDVISYNTLVDG 491

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C  GR  EA +L + MVS   + PD  TYN L+ G+C+  ++D A  +   M   G  P
Sbjct: 492 HCLTGRIDEAAKLLDVMVSIG-LKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP 550

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
            V  Y T+++G  + G+  EAKE++  M N   K D   YT ++N  CR   VDEA ++ 
Sbjct: 551 GVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMF 610

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           + +  +  + DI T NI++G L + G+ E+A+ +   +   G+  +  +YR++     ++
Sbjct: 611 QSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKE 670

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G LE+  EL   M   G  P+    N L+  L   G    A + L  L E  F  E+ + 
Sbjct: 671 GSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTT 730

Query: 488 ALLVELICRG 497
           ++L+ +  R 
Sbjct: 731 SMLISIYSRA 740



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/447 (23%), Positives = 217/447 (48%), Gaps = 10/447 (2%)

Query: 72  EKEPQCALEIFNTVSEQKGFNH--NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           EK  + ALE+ + +++    +H  N  TY T++D L + +  +    V + M  +  + +
Sbjct: 177 EKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPN 236

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQN 187
              +  L+  + +    + V++M  ++  H +   +P     +  L+ L ++ +   A+N
Sbjct: 237 NHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGL---QPDCVIYAVLLDYLCKNGRCTEARN 293

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
               S     +KP+  I+ IL+  +   G L      L  M ++ +S P+   ++ + + 
Sbjct: 294 IFD-SLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVS-PDHHIFNIMFNA 351

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
             K     EA+ +F++M  +  + P  + Y  LID  C+ G+VD A      M N G  P
Sbjct: 352 YAKKAMIDEAMHIFDKM-RQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTP 410

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           ++F +++L+ G C   K ++A+++F E+ +  ++ +   +  L+   CR GRV EA  L+
Sbjct: 411 DIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLI 470

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M     + D++++N ++ G C  G+I+EA  +L+ +   G+  ++ +Y  +L+  C+ 
Sbjct: 471 DLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKA 530

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
             ++ A  L R ML +G  P   T N +L  L + G   +A      ++    K +  ++
Sbjct: 531 RRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTY 590

Query: 488 ALLVELICRGRKLLFAFELLDELVIKE 514
            +++  +CR   +  AF++   L  K+
Sbjct: 591 TIILNGLCRNNFVDEAFKMFQSLCSKD 617



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 197/427 (46%), Gaps = 18/427 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  IF+++  +KG   +   Y  +L   A       + + L  M          IF  + 
Sbjct: 291 ARNIFDSLI-RKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMF 349

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             ++  ++ +  + +F K+       P +      ++ L +  +VD A   LK+ NQ + 
Sbjct: 350 NAYAKKAMIDEAMHIFDKMRQ-QWLSPGVVNYGALIDALCKLGRVDDA--VLKF-NQMIN 405

Query: 198 --LKPNTCIFNILIKHHCKRGTLESA----FEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             + P+  +F+ L+   C     E A    FEVL +  +   ++ N+     L+  LC+ 
Sbjct: 406 EGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNI-----LMCNLCRE 460

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  EA  L + M+  D + PD ++YN L+DG C  G++D A K+++ M + G  P+ F 
Sbjct: 461 GRVMEAQRLIDLMLRVD-VRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFT 519

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y TL++G+CK  ++ +A  +F EM    L P  + Y T+++   + GR  EA EL   M 
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMI 579

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
               K DI T+ IIL GLCR   ++EA  M + L    + L+  +  I++    + G  E
Sbjct: 580 NNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKE 639

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A++L   +   G +P   T   +   L K G  E+       + E G  P S     LV
Sbjct: 640 DAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699

Query: 492 E-LICRG 497
             L+ RG
Sbjct: 700 RWLLHRG 706



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 152/307 (49%), Gaps = 4/307 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +++ P++C + ILI   C+ G L+  F     + K+  S  N + +  L+ GLC   R  
Sbjct: 86  VKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVD 145

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG---CNPNVFNY 312
           EA ++    + +     + ++YN+L+ G C   + + A ++M  M ++G     PNV  Y
Sbjct: 146 EATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTY 205

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TT+++G CK   +  AK VF  M +  ++P+   YT LI+ +   G+  E +++L+EM  
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMST 265

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + D V + ++L  LC+ G+  EA  + + L   GI  +   Y I+L+    +G L +
Sbjct: 266 HGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSE 325

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
               L LM+  G  P +   N +     K  M ++A      + +    P   ++  L++
Sbjct: 326 MHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALID 385

Query: 493 LICR-GR 498
            +C+ GR
Sbjct: 386 ALCKLGR 392



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/364 (21%), Positives = 156/364 (42%), Gaps = 44/364 (12%)

Query: 60  ISHGAAI-SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           +++GA I +L K  +     L+    ++E  G   +   +++++  L    K+E  + + 
Sbjct: 378 VNYGALIDALCKLGRVDDAVLKFNQMINE--GVTPDIFVFSSLVYGLCTVDKWEKAEKLF 435

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLL 176
            ++  +  + +   F  LM    N     RV+E    I  + R   +P + + +T ++  
Sbjct: 436 FEVLDQGIRLNAAFFNILM---CNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGH 492

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-- 234
             + ++D A   L      + LKP+   +N L+  +CK   ++ A+ + +EM    ++  
Sbjct: 493 CLTGRIDEAAKLLDVMVS-IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPG 551

Query: 235 -----------------------YPNLI---------TYSTLIDGLCKNGRFREAIELFE 262
                                  Y N+I         TY+ +++GLC+N    EA ++F+
Sbjct: 552 VVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQ 611

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            + SKD  L D  T N++I    +GG+ + A  +   +   G  P+V  Y  +     KE
Sbjct: 612 SLCSKDLQL-DIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKE 670

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G L+E  E+F  M+     P++     L+      G +  A   L ++ E+    +  T 
Sbjct: 671 GSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTT 730

Query: 383 NIIL 386
           ++++
Sbjct: 731 SMLI 734


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 197/360 (54%), Gaps = 26/360 (7%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
           L+ L ++N   LA  + K+     R   P+   ++I+++  CK G L+ A E+L ++++S
Sbjct: 45  LDALAKANAGQLA--YEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRES 102

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +   N+ITYS +IDG CK  R  +A+E+F+ M S    +PD +T+N L+ G C G ++ 
Sbjct: 103 GVKL-NVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMS 161

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A  + E+M   GC PNV +Y+TL++G CK G+L EA  +++EM      PD + YT+ +
Sbjct: 162 EAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFV 221

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG-MLEKLWYDGI 410
              C+A RV EA +  ++M  +G KAD V F+ ++G LC++G  EEA   M+E L   G+
Sbjct: 222 TGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGM 281

Query: 411 YLNKAS-----------------YRIVLNFSCQKGELEKAIELL-RLMLCRGFL--PHYA 450
            L++A                  +  +++  C+   L   + L  R+   + F   P+  
Sbjct: 282 -LDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N ++  LCKA   ++A   +  +   G  P+  +++ LV+ +C+  KL  A +LL+E+
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 220/488 (45%), Gaps = 58/488 (11%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           + +F+ +  QKG+ H+  TY   LD LA+    +      +QM        +  +  +++
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
                   ++  E+  ++   +  K ++   S  ++   ++++VD A    K  +     
Sbjct: 82  GLCKAGELDKAKELLGQLRE-SGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGC 140

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   FN L+K  C    +  AF + + M K+    PN+I+YSTL+DGLCK GR  EA 
Sbjct: 141 VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE-PNVISYSTLLDGLCKAGRLDEAC 199

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L+EEMV K   +PD + Y   + G C+  +V  A      M   G   +   ++T++  
Sbjct: 200 RLWEEMVEK-SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 319 FCKEGKLQEAK-----------------EVFDEM-------------------------- 335
            CK+G  +EA+                 + F+EM                          
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 336 ------------KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
                       K F   P+   Y  +++  C+A ++DEA EL+ EM   G   D+VT++
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC+ GK++ A  +LE++  +G++ +  +   +LN   + G+++ A+  L  M  R
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T N LL  LCKAG  ++A   L  +V     P+  S+ +++  +CR  +   A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 504 FELLDELV 511
             +  E+V
Sbjct: 499 HAIFQEMV 506



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 212/444 (47%), Gaps = 31/444 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  +Y+T+LD L +  + +    +  +M  ++C      + + +      +   
Sbjct: 172 KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVA 231

Query: 148 RVLEMFHKIHPITR-EKPSLKAISTCLNLLIESNQVDLAQNFL----------------- 189
              +   K+  +T+  K    A ST + +L +    + AQN +                 
Sbjct: 232 EACDCCRKM--VTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289

Query: 190 --KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY--PNLITYSTLI 245
               S  H    P+  +FN LI   CK   L     + + MK  +  Y  PNL TY+ ++
Sbjct: 290 EEMISRNH---PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMV 346

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           D LCK  +  EA EL  EM +   + PD +TY+ L+DG C+ GK+DRA  ++E M   G 
Sbjct: 347 DNLCKAKQLDEAQELVNEMANYG-LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV 405

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            P+ F   +++N   K GK+  A    + MK     PD + Y TL++  C+AGR+DEA+ 
Sbjct: 406 FPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAIT 465

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
            L +M    C  D+ ++ II+  LCR G+   A  + +++   G+  +   Y  +L+   
Sbjct: 466 FLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G  + A+ELL+  LC+   P +     +L  LCKAG AEDA   +  + + GF  ++ 
Sbjct: 526 RNGLEDLALELLKTSLCK---PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAF 582

Query: 486 SWALLVELICRGRKLLFAFELLDE 509
           ++  +V  + +  K+  A +L+D+
Sbjct: 583 TYISVVSGLRKLGKVDKARQLVDD 606



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 1/246 (0%)

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+    + LF+ +  +        TYN  +D   +      A +  + M+  G  P+ F 
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+ ++ G CK G+L +AKE+  +++   +K + I Y+ +I+  C+A RVD+ALE+ K M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 372 E-RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
              GC  D+VTFN +L GLC   ++ EA  + E +   G   N  SY  +L+  C+ G L
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           ++A  L   M+ +  +P        +  LCKA    +A      +V  G K ++ +++ +
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 491 VELICR 496
           + ++C+
Sbjct: 256 IGILCK 261



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 146/295 (49%), Gaps = 43/295 (14%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ N ++   G + +  TY+ ++D L +  K +    +L +M+       EG+F +  
Sbjct: 358 AQELVNEMANY-GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS------KEGVFPD-- 408

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F++ S+                           LN L ++ +VD A + L+ + +   
Sbjct: 409 -SFTDASI---------------------------LNALSKAGKVDYALSHLE-TMKARG 439

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +N L+   CK G ++ A   L +M  ++ + P++ +Y+ +I  LC++G+   A
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCT-PDVFSYTIIITALCRSGQAAGA 498

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F+EMV K  +LPD + Y+ L+DG  R G  D A   +E +K + C P+   +  +++
Sbjct: 499 HAIFQEMV-KRGVLPDTVLYHSLLDGLARNGLEDLA---LELLKTSLCKPDFVMHKMVLD 554

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           G CK GK ++A EV + M +     D   Y ++++   + G+VD+A +L+ +  E
Sbjct: 555 GLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASE 609


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 180/313 (57%), Gaps = 4/313 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  ++  +I   CK G  E A E+L  M    +  PN++ Y+T++ G+C   R+ +A E
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLK-PNVVCYNTVLKGICSADRWEKAEE 322

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  K+  L D +T+N+L+D FC+ G VDR  +++E M  +GC P+V  YTT++NGF
Sbjct: 323 LLTEMYQKNCPLDD-VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG + EA  +   M +   KP+TI YT ++   C   R  +A EL+  M ++GC  + 
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNP 441

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFN I+  LC++G +E+A+ +L+++  +G   +  SY  V++   + G+ E+A+ELL +
Sbjct: 442 VTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNV 501

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGR 498
           M+ +G  P+  T + +   L + G   D  I +F  + +   + ++  +  ++  +C+ R
Sbjct: 502 MINKGITPNVITYSSMAFALAREGRI-DKVIQMFDNIQDATIRSDAVLYNAVISSLCKRR 560

Query: 499 KLLFAFELLDELV 511
           +   A + L  +V
Sbjct: 561 ETDLAIDFLAYMV 573



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 169/317 (53%), Gaps = 10/317 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N++I   C +G ++   E+L+++        ++++Y+ ++ GLC   R+ +  EL +EMV
Sbjct: 190 NLVINAICDQGCVDEGLEMLRKLPLFGCEA-DIVSYNAVLKGLCAAKRWGDVEELMDEMV 248

Query: 266 SKDQIL---------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
              + L         PD   Y  +IDG C+ G  + A +I+  M + G  PNV  Y T++
Sbjct: 249 KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVL 308

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            G C   + ++A+E+  EM       D + +  L++ FC+ G VD  +ELL++M E GC 
Sbjct: 309 KGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCM 368

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D++T+  ++ G C+EG I+EA+ +L+ +   G   N  SY IVL   C       A EL
Sbjct: 369 PDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEEL 428

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           +  M+ +G LP+  T N ++  LCK G+ E A   L  ++  G  P+  S++ +++ + +
Sbjct: 429 MSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGK 488

Query: 497 GRKLLFAFELLDELVIK 513
             K   A ELL+ ++ K
Sbjct: 489 AGKTEEALELLNVMINK 505



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 192/385 (49%), Gaps = 14/385 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAV----------LRQMTYETCKFHEGIFLNLMKH 139
           G   +  +Y  +L  L   K++  V+ +          L QM    C     ++  ++  
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
                 HE   E+  ++ P    KP++   +T L  +  +++ + A+  L    Q     
Sbjct: 276 ICKEGHHEVANEILSRM-PSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK-NCP 333

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            +   FNIL+   C+ G ++   E+L++M +     P++ITY+T+I+G CK G   EA+ 
Sbjct: 334 LDDVTFNILVDFFCQNGLVDRVIELLEQMLE-HGCMPDVITYTTVINGFCKEGLIDEAVM 392

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L + M S     P+ ++Y +++ G C   +   A+++M  M   GC PN   + T++N  
Sbjct: 393 LLKNMPSCG-CKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFL 451

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+G +++A E+  +M      PD I Y+T+I+   +AG+ +EALELL  M  +G   ++
Sbjct: 452 CKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNV 511

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T++ +   L REG+I++ + M + +    I  +   Y  V++  C++ E + AI+ L  
Sbjct: 512 ITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAY 571

Query: 440 MLCRGFLPHYATSNELLVRLCKAGM 464
           M+  G +P+ +T   L+  L   G+
Sbjct: 572 MVSNGCMPNESTYTALIKGLASEGL 596



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 187/360 (51%), Gaps = 12/360 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   +   YATI+D + +    E  + +L +M     K +   +  ++K   +    E
Sbjct: 259 QHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWE 318

Query: 148 R----VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +    + EM+ K  P+     ++     C N L++   ++L +  L++        P+  
Sbjct: 319 KAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVD-RVIELLEQMLEHG-----CMPDVI 372

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +  +I   CK G ++ A  +LK M  S    PN I+Y+ ++ GLC   R+ +A EL   
Sbjct: 373 TYTTVINGFCKEGLIDEAVMLLKNMP-SCGCKPNTISYTIVLKGLCSTERWVDAEELMSR 431

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ +   LP+ +T+N +I+  C+ G V++A ++++ M  NGCNP++ +Y+T+++G  K G
Sbjct: 432 MIQQG-CLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAG 490

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K +EA E+ + M N  + P+ I Y+++     R GR+D+ +++   +++   ++D V +N
Sbjct: 491 KTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYN 550

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++  LC+  + + A+  L  +  +G   N+++Y  ++     +G L +A +LL  +  R
Sbjct: 551 AVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 164/352 (46%), Gaps = 50/352 (14%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++  +C+ G +E+A    + +  +    PN  TY  ++ GLC  GR  +A+ + +EM
Sbjct: 87  YNAMVAGYCRVGQVEAA----RRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEM 142

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN--------------------- 303
            S+   +P    Y+V+I+  CR G    A +++E +                        
Sbjct: 143 TSR-SCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGC 201

Query: 304 --------------GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE----------MKNFL 339
                         GC  ++ +Y  ++ G C   +  + +E+ DE          M    
Sbjct: 202 VDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHG 261

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             PD   Y T+I+  C+ G  + A E+L  M   G K ++V +N +L G+C   + E+A 
Sbjct: 262 CTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAE 321

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L +++     L+  ++ I+++F CQ G +++ IELL  ML  G +P   T   ++   
Sbjct: 322 ELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           CK G+ ++A + L  +   G KP + S+ ++++ +C   + + A EL+  ++
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI 433



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 17/282 (6%)

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S LI  LC  GR  +A+   +   +   ++     YN ++ G+CR G+V+ A+++   + 
Sbjct: 56  SALIRSLCVAGRTADAVRALDAAGNAAGVV----DYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                PN + Y  ++ G C  G++ +A  V DEM +    P    Y  +I   CR+G   
Sbjct: 112 ---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            AL +L+ +  +G   D    N+++  +C +G ++E L ML KL   G   +  SY  VL
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 422 NFSCQK---GELE-------KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
              C     G++E       K  E L  M   G  P       ++  +CK G  E A   
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L  +   G KP    +  +++ IC   +   A ELL E+  K
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK 330


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 211/421 (50%), Gaps = 4/421 (0%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T+ T+++ L    K      ++ +M    C+     + +++            
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            +M  K+      K  +   ST ++ L     +D A +  K   +   +K +   +N L+
Sbjct: 213 FDMLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFK-EMETKGIKSSVVTYNSLV 270

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
           +  CK G       +LK+M   ++  PN+IT++ L+D   K G+ +EA EL++EM+++  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITR-G 328

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ +TYN L+DG+C   ++  A  +++ M  N C+P++  +T+L+ G+C   ++ +  
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +VF  +    L  + + Y+ L+  FC++G++  A EL +EM   G   D++T+ I+L GL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  GK+E+AL + E L    + L    Y  ++   C+ G++E A  L   + C+G  P+ 
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T   ++  LCK G   +A I L  + E G  P   ++  L+    R   L  + +L++E
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568

Query: 510 L 510
           +
Sbjct: 569 M 569



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 165/298 (55%), Gaps = 2/298 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN+L+    K G L+ A E+ KEM    +S PN+ITY+TL+DG C   R  EA  
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANN 354

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + MV +++  PD +T+  LI G+C   +VD   K+   +   G   N   Y+ L+ GF
Sbjct: 355 MLDLMV-RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ GK++ A+E+F EM +  + PD + Y  L++  C  G++++ALE+ +++++      I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +  I+ G+C+ GK+E+A  +   L   G+  N  +Y ++++  C+KG L +A  LLR 
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           M   G  P+  T N L+    + G    +A  +  +   GF  ++ S  ++++++  G
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 180/353 (50%), Gaps = 5/353 (1%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  P L   S   + +  + Q +L  +F K    +  +  N    NI+I   C+     
Sbjct: 82  SRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTC 140

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A+ VL ++ K  + Y P+  T++TLI+GLC  G+  +A+ L + MV ++   PD +TYN
Sbjct: 141 FAYSVLGKVMK--LGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV-ENGCQPDMVTYN 197

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            +++G CR G    A  ++  M+      +VF Y+T+++  C++G +  A  +F EM+  
Sbjct: 198 SIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            +K   + Y +L+   C+AG+ ++   LLK+M  R    +++TFN++L    +EGK++EA
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             + +++   GI  N  +Y  +++  C +  L +A  +L LM+     P   T   L+  
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            C     +D       + + G    + ++++LV+  C+  K+  A EL  E+V
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 131/258 (50%), Gaps = 1/258 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI LF+EM+ + + LP  + ++       R  + +      + ++ NG   N++    +
Sbjct: 71  DAIALFQEMI-RSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N FC+  K   A  V  ++     +PDT  + TLIN  C  G+V +A+ L+  M E GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D+VT+N I+ G+CR G    A  ML K+    +  +  +Y  +++  C+ G ++ AI 
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L + M  +G      T N L+  LCKAG   D A+ L  +V     P   ++ +L+++  
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 496 RGRKLLFAFELLDELVIK 513
           +  KL  A EL  E++ +
Sbjct: 310 KEGKLQEANELYKEMITR 327



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 2/166 (1%)

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +INCFCR  +   A  +L ++ + G + D  TFN ++ GLC EGK+ +A+ +++++  +G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
              +  +Y  ++N  C+ G+   A ++LR M  R       T + ++  LC+ G   DAA
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCI-DAA 247

Query: 470 IALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           I+LF  +E  G K    ++  LV  +C+  K      LL ++V +E
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 185/353 (52%), Gaps = 44/353 (12%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N L+   CK G L+ A ++     K     P+++TY+ LI+G CK  +  EA  
Sbjct: 43  PDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGF-VPDVVTYNALINGFCKADKLDEAQR 101

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + MVS++ ++PD +TYN L++G C+ G+VD A+ ++    + G +PNV  Y+TL++G 
Sbjct: 102 ILQRMVSEN-LVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGL 157

Query: 320 C------------------------------------KEGKLQEAKEVFDEMKNFLLKPD 343
           C                                    KE ++ EA E+F  +    L+PD
Sbjct: 158 CRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 217

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I YT  I+  C+AGRV++AL +LK+M E+GC  D+V+ N ++ GLC+E +++EA  +L 
Sbjct: 218 AITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLS 277

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA- 462
            +   G   N  S+  ++   C+ G+ +KA+   + ML RG  P   T N L+  LCKA 
Sbjct: 278 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 337

Query: 463 --GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             G  ++A      ++E G  P+  +++ L++ + +  KL  A  LL  +  K
Sbjct: 338 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 390



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 210/444 (47%), Gaps = 48/444 (10%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF  N  TY  +L  L    +     A+  +M           +  L+  F      +
Sbjct: 3   KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
             L++F     + R   P +   +  +N   +++++D AQ  L+       L P+   +N
Sbjct: 63  EALKIFD--GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-NLVPDVVTYN 119

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC----------------- 249
            L+   CK G ++ A  ++ +   S    PN+ITYSTLI GLC                 
Sbjct: 120 SLVNGLCKNGRVDEARMLIVDKGFS----PNVITYSTLISGLCRELRGVSEALKLFGSVL 175

Query: 250 -------------------KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
                              K  R  EA ELF  +V K  + PDA+TY V IDG C+ G+V
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV-KHGLEPDAITYTVFIDGLCKAGRV 234

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           + A  +++ M   GC P+V ++  ++NG CKE ++ EA+ +   M+     P+ I + TL
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR---EGKIEEALGMLEKLWY 407
           I   CRAG+  +A+   KEM +RG K  +VT+NI++ GLC+   EG+I+EA+ + + +  
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G   +  +Y  +++   + G+L+ A  LL  M  +G +P+  T N L+  LC     ++
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414

Query: 468 AAIALFGLVEMGFKPESDSWALLV 491
           A      +VE G  P++ ++  ++
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTII 438



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 148/267 (55%), Gaps = 5/267 (1%)

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           +PN ITY+ L+ GLC  GR  +A  L+E M+ K    PD +TYN L+ GFC+ G++D A 
Sbjct: 7   WPNRITYNALLSGLCNGGRMSDAQALYERMI-KAGYSPDVVTYNTLLHGFCKVGELDEAL 65

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           KI +     G  P+V  Y  L+NGFCK  KL EA+ +   M +  L PD + Y +L+N  
Sbjct: 66  KIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK-IEEALGMLEKLWYDGIYLN 413
           C+ GRVDEA  L+    ++G   +++T++ ++ GLCRE + + EAL +   +   G    
Sbjct: 126 CKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPE 182

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y I+++   ++  + +A EL   ++  G  P   T    +  LCKAG  EDA + L 
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 242

Query: 474 GLVEMGFKPESDSWALLVELICRGRKL 500
            + E G  P+  S   ++  +C+ +++
Sbjct: 243 DMDEKGCVPDVVSHNAVINGLCKEKRV 269



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 184/380 (48%), Gaps = 39/380 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET------------ 125
           AL+IF+  + ++GF  +  TY  +++   +  K +    +L++M  E             
Sbjct: 64  ALKIFDG-AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122

Query: 126 ---CK---FHEGIFLNLMKHFSN------------CSLHERVLEMFHKIHPITRE--KPS 165
              CK     E   L + K FS             C     V E       + ++  +P 
Sbjct: 123 NGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPE 182

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           +   +  ++ L++ ++V+ A        +H  L+P+   + + I   CK G +E A  +L
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKH-GLEPDAITYTVFIDGLCKAGRVEDALLML 241

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
           K+M + +   P++++++ +I+GLCK  R  EA  L   M +K    P+A+++N LI G C
Sbjct: 242 KDMDE-KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK-GCSPNAISFNTLICGQC 299

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK---EGKLQEAKEVFDEMKNFLLKP 342
           R GK  +A    + M   G  P V  Y  L++G CK   EG+++EA  +FD M      P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + Y+ LI+   +AG++D+A  LL  M+ +GC  ++ T+N ++ GLC   K++EAL + 
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419

Query: 403 EKLWYDGIYLNKASYRIVLN 422
             +   G   +  +Y  +++
Sbjct: 420 VAMVEKGCVPDTITYGTIIS 439



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 136/247 (55%), Gaps = 8/247 (3%)

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K    P+ +TYN L+ G C GG++  A+ + E M   G +P+V  Y TL++GFCK G+L 
Sbjct: 3   KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++FD        PD + Y  LIN FC+A ++DEA  +L+ M       D+VT+N ++
Sbjct: 63  EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL---MLCR 443
            GLC+ G+++EA  ++      G   N  +Y  +++  C+  EL    E L+L   +L +
Sbjct: 123 NGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCR--ELRGVSEALKLFGSVLKQ 177

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G+ P   T N L+  L K     +A     GLV+ G +P++ ++ + ++ +C+  ++  A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 504 FELLDEL 510
             +L ++
Sbjct: 238 LLMLKDM 244



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 124/213 (58%), Gaps = 4/213 (1%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+ +G  PN   Y  L++G C  G++ +A+ +++ M      PD + Y TL++ FC+ G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +DEAL++     +RG   D+VT+N ++ G C+  K++EA  +L+++  + +  +  +Y  
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEM 478
           ++N  C+ G +++A     L++ +GF P+  T + L+  LC+       A+ LFG +++ 
Sbjct: 121 LVNGLCKNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G++PE  ++ +L++ + +  ++  AFEL   LV
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 210


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 166/329 (50%), Gaps = 43/329 (13%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +N +I   C RG +++A EV++EM++     P+  TY+TLI G CK GR  +A 
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAA 203

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD--------------------------- 291
           ++F+EM+++ ++ P A+ YN LI G+C  GK+D                           
Sbjct: 204 KVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHA 263

Query: 292 --------RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
                    A  ++E M+ NG +P+VF Y  L+NG+CKEG  ++A EVF+EM    ++  
Sbjct: 264 LFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRAT 323

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + YT+LI  F R G+V E   L K   ++G + D+V +N ++   C  G +E A  ++ 
Sbjct: 324 AVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMA 383

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++    I  +  +Y  ++   C  G L++A  L+  M  RG  P           LCK G
Sbjct: 384 EMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLG--------LCKNG 435

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVE 492
             +DA   +  +V  G  P+  ++  L+E
Sbjct: 436 QGDDAENLMKEMVGKGITPDDSTYISLIE 464



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 6/318 (1%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            LRL   T  FNI+++H C  G    A E+L++M +     PN +TY+T+I G C  GR 
Sbjct: 109 RLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR-----PNAVTYNTVIAGFCARGRV 163

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYT 313
           + A+E+  EM  +  I PD  TY  LI G+C+ G+++ A K+ + M   G   P+   Y 
Sbjct: 164 QAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYN 223

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G+C  GKL  A +  ++M    +      Y  L++     GR  +A  +L+EM+  
Sbjct: 224 ALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRN 283

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   D+ T+NI++ G C+EG  ++AL + E++   G+     +Y  ++    +KG++++ 
Sbjct: 284 GLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQET 343

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             L ++ + +G  P     N L+   C  G  E A   +  + +    P+  ++  L+  
Sbjct: 344 DRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRG 403

Query: 494 ICRGRKLLFAFELLDELV 511
            C   +L  A  L+DE+ 
Sbjct: 404 FCLLGRLDEARGLIDEMT 421



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 17/337 (5%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++   I+        Q ALE+   + E+ G   +  TYAT++    +  + E   
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAA 203

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            V  +M  +       +  N +     C   +  + + ++   + R    +       NL
Sbjct: 204 KVFDEMLTQGEVAPSAVMYNALIG-GYCDRGKLDVALQYREDMVQR---GVAMTVATYNL 259

Query: 176 LIESNQVD-LAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L+ +  +D  A +      +  R  L P+   +NILI  +CK G  + A EV +EM +  
Sbjct: 260 LVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKG 319

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +     +TY++LI    + G+ +E   LF+  V K  I PD + YN LI+  C GG ++R
Sbjct: 320 VR-ATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKG-IRPDVVMYNALINSHCAGGDMER 377

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A +IM  M+     P+   Y TL+ GFC  G+L EA+ + DEM    ++PD +G      
Sbjct: 378 AFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD-LG------ 430

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
             C+ G+ D+A  L+KEM  +G   D  T+  ++ GL
Sbjct: 431 -LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 228/480 (47%), Gaps = 55/480 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+EI N +S  KG   +  TY T++  L + ++FEA + ++ +M        E    NL+
Sbjct: 269 AVEIKNLLS-YKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                        ++ +K+       PSL   +  +N + +  ++D A++    +  H  
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFG-VAPSLFVYNALINSMCKDGKLDEAESLFN-NMGHKG 385

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS---YPNLITYSTLIDGLCKNGRF 254
           L PN   ++ILI   CKRG L+ A   L +M +  +    YP    YS+LI G CK G+ 
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP----YSSLISGHCKLGKL 441

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           R A  LF+EM++ + + P+ + Y  LI G+C+ G++  A ++   M   G +PN + +T 
Sbjct: 442 RAAKSLFDEMIA-NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G C   ++ EA ++F EM  + + P+ + Y  LI   C+ G    A ELL EM E+G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560

Query: 375 CKADIVTFNIILGGLCREGKIEEA------------------------------------ 398
              D  T+  ++ GLC  G++ EA                                    
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCK 620

Query: 399 LGMLEK-------LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +G+++K       +       N+ +Y   L++   +G +EKAI+L  ++L  GFL +  T
Sbjct: 621 IGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVT 679

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+   CK G  ++AA  L  +++ G  P+  S++ ++   CR   L  A +L + ++
Sbjct: 680 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 739



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 237/506 (46%), Gaps = 60/506 (11%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H     LI+   + + AL  FN +   K F+H+  ++  ++  L +   +    ++L+ +
Sbjct: 60  HHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTL 119

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERV-LEMFHKIHPITREK----------------P 164
                   EG+F + +  +  C+    +  ++  + +   R +                P
Sbjct: 120 LLRGLN-PEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILP 178

Query: 165 SLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
            ++ +S  LN LI   Q  +A + F +  +  LR  P+  ++  +++  C+      A E
Sbjct: 179 QIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLR--PDVYVYTAVVRSLCELKDFIRARE 236

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL----------------------- 260
           V+  M+ S     ++ TY+  I GLCKN R  EA+E+                       
Sbjct: 237 VIGRMESSGCDL-SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295

Query: 261 --FEEMVSKDQIL---------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
              EE  + ++++         P     + L+DG  + G +  A  ++  +K  G  P++
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           F Y  L+N  CK+GKL EA+ +F+ M +  L P+ + Y+ LI+ FC+ G++D AL  L +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M E G KA +  ++ ++ G C+ GK+  A  + +++  +G+  N   Y  +++  C++GE
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG-MAEDAAIALFG-LVEMGFKPESDSW 487
           L  A  L   M  +G  P+  T   L+  LC A  MAE  A  LFG +VE    P   ++
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE--ANKLFGEMVEWNVIPNEVTY 533

Query: 488 ALLVELICRGRKLLFAFELLDELVIK 513
            +L+E  C+    + AFELLDE+V K
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEK 559



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 200/398 (50%), Gaps = 9/398 (2%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           ++ + AL +F+ +    G   +   Y  ++  L   K F     V+ +M    C      
Sbjct: 194 RQFRMALHLFDEIV-SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVAT 252

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           +   ++       ++RV E   +I  +   K     + T   L++   +V+  +   +  
Sbjct: 253 YNVFIRGLCK---NQRVWEAV-EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308

Query: 193 NQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           N+ +     P+    + L+    K+G + SAF+++ ++KK  ++ P+L  Y+ LI+ +CK
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA-PSLFVYNALINSMCK 367

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           +G+  EA  LF  M  K  + P+ +TY++LID FC+ GK+D A   +  M   G    V+
Sbjct: 368 DGKLDEAESLFNNMGHKG-LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y++L++G CK GKL+ AK +FDEM    LKP+ + YT+LI+ +C+ G +  A  L  EM
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             +G   +  TF  ++ GLC   ++ EA  +  ++    +  N+ +Y +++   C++G  
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            +A ELL  M+ +G +P   T   L+  LC  G   +A
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 167/340 (49%), Gaps = 44/340 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN  I+  LI  +CK G L +AF +  EM    +S PN  T++ LI GLC   R  EA
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS-PNTYTFTALISGLCHANRMAEA 514

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF EMV  + ++P+ +TYNVLI+G C+ G   RA ++++ M   G  P+ + Y  L++
Sbjct: 515 NKLFGEMVEWN-VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLIS 573

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLK--------PDTIGYTTLINCFCRAGRVDEALELLKE 369
           G C  G++ EA+E  ++++    K        P+ + YT LIN  C+ G +D+A  L +E
Sbjct: 574 GLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 633

Query: 370 MKE----------------------------------RGCKADIVTFNIILGGLCREGKI 395
           M                                     G  A+ VT+NI++ G C+ G+I
Sbjct: 634 MLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRI 693

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA  +L  +   GI  +  SY  ++   C++G+L++AI+L   ML RG  P     N L
Sbjct: 694 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 753

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +   C  G    A      ++  G KP   ++  L+   C
Sbjct: 754 IYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 180/370 (48%), Gaps = 11/370 (2%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           Y++++    +  K  A  ++  +M     K +  I+ +L+  +           ++H++ 
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
                 P+    +  ++ L  +N++  A N L        + PN   +N+LI+ HCK G 
Sbjct: 488 G-KGISPNTYTFTALISGLCHANRMAEA-NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-------I 270
              AFE+L EM +  +  P+  TY  LI GLC  GR  EA E   ++  + Q        
Sbjct: 546 TVRAFELLDEMVEKGL-VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGC 604

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           LP+ +TY  LI+G C+ G +D+A+ +   M  +   PN   Y   ++    EG +++A +
Sbjct: 605 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 664

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + D +    L  +T+ Y  LI  FC+ GR+ EA E+L  M + G   D ++++ I+   C
Sbjct: 665 LHDVLLEGFL-ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 723

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           R G ++EA+ + E +   G+  +  +Y  ++   C  GEL KA EL   M+ RG  P+ A
Sbjct: 724 RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRA 783

Query: 451 TSNELLVRLC 460
           T N L+   C
Sbjct: 784 TYNSLIHGTC 793



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 3/166 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +   + +    G +E A ++   + +  ++  N +TY+ LI G CK GR +EA E
Sbjct: 641 PNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA--NTVTYNILIRGFCKLGRIQEAAE 698

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M+    I PD ++Y+ +I  +CR G +  A K+ E M N G NP+   Y  L+ G 
Sbjct: 699 VLVNMIDSG-ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 757

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
           C  G+L +A E+ D+M    +KP+   Y +LI+  C    V    +
Sbjct: 758 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 803



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 2/132 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT  +NILI+  CK G ++ A EVL  M  S +S P+ I+YST+I   C+ G  +EAI+L
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGIS-PDCISYSTIIYEYCRRGDLKEAIKL 734

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           +E M+++  + PD + YN LI G C  G++ +A ++ + M   G  PN   Y +L++G C
Sbjct: 735 WESMLNRG-VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793

Query: 321 KEGKLQEAKEVF 332
               +    + F
Sbjct: 794 LMSSVSSTADYF 805


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 230/487 (47%), Gaps = 62/487 (12%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S+   I+ +  E E   A  +F+ +  Q GF  N  TY +++D L + +  +  +AVL+
Sbjct: 140 LSYNMVINGLFKEGEVDKAYTLFHEMLGQ-GFPPNIVTYNSVIDGLCKAQAMDKAEAVLQ 198

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERV------LEMFHKIHPITR------------ 161
           QM ++  +  E +   L+K  S   L   V      ++ + KI   T             
Sbjct: 199 QM-FDKGQLEEAV--RLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRG 255

Query: 162 EKPSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           + P      T L+    +   VD+           + L+ +  +FNILI+ + K  TL+ 
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDH--VFNILIRAYAKNETLDK 313

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A     EM++   S PN++TY+T+ID LCK GR  +A+  F +MVS + + PD +T+  L
Sbjct: 314 AMTAFIEMRQKGFS-PNVVTYTTVIDILCKAGRVEDAVSHFSQMVS-EGLSPDIITFTSL 371

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I G C  G+  + +K+   M N G +PN     T+M+  CKEG++ EA + FD++ +  +
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGV 431

Query: 341 KPDTIGYTTLI-----------------------------------NCFCRAGRVDEALE 365
           KPD + YT LI                                   N +C+ GRVD+AL 
Sbjct: 432 KPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALA 491

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L +EM  +  K + +T+NIIL GL   G++  A     K+   GI L   +Y IVL   C
Sbjct: 492 LYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLC 551

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           +   +++A+ + + +  + F     T N ++V L K G   DA      ++  G  P++ 
Sbjct: 552 ENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAI 611

Query: 486 SWALLVE 492
            + L+++
Sbjct: 612 IYGLMIQ 618



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 202/395 (51%), Gaps = 13/395 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  IF+++  ++G N +  TY T+L   A       +  +L  M  +     + +F  L+
Sbjct: 244 ARNIFDSMV-RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILI 302

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQV-DLAQNFLKYSN 193
           + ++     ++ +  F ++    R+K   P++   +T +++L ++ +V D   +F +  +
Sbjct: 303 RAYAKNETLDKAMTAFIEM----RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + L   P+   F  LI   C  G  +   ++  EM    + +PN I  +T++D LCK GR
Sbjct: 359 EGL--SPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGI-HPNAIFLNTIMDSLCKEGR 415

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA + F++++    + PD ++Y +LIDG+C  GK+D + K++  M + G  P+   Y+
Sbjct: 416 VLEAHDFFDQIIHVG-VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYS 474

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+NG+CK G++ +A  ++ EM +  +KP+ I Y  +++    AGRV  A E   ++ + 
Sbjct: 475 ALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS 534

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G +  I T+NI+LGGLC    ++EAL M + L      L   ++ I++    + G +  A
Sbjct: 535 GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDA 594

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             L   +L  G +P       ++    + G+ E++
Sbjct: 595 KSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEES 629



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 56/400 (14%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCK-------- 214
           P++ + +  +N L +  +VD A   F +   Q     PN   +N +I   CK        
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGF--PPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 215 --------RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
                   +G LE A  +LK+M    +  P+++TYS LID  CK GR  EA  +F+ MV 
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQ-PDVVTYSLLIDYYCKIGRCTEARNIFDSMVR 253

Query: 267 KDQILPDALTY-----------------------------------NVLIDGFCRGGKVD 291
           + Q  PDA TY                                   N+LI  + +   +D
Sbjct: 254 RGQN-PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLD 312

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
           +A      M+  G +PNV  YTT+++  CK G++++A   F +M +  L PD I +T+LI
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +  C  G   +  +L  EM  RG   + +  N I+  LC+EG++ EA    +++ + G+ 
Sbjct: 373 HGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            +  SY I+++  C  G+++++I+LL  M+  G  P   T + LL   CK G  +DA   
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              +     KP + ++ +++  +    +++ A E   ++V
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIV 532



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 177/377 (46%), Gaps = 65/377 (17%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-----------PNLITYSTLI 245
           +L  + C F ILI+  C  G L+ A E  +E + S+ +            PN+++Y+ +I
Sbjct: 89  KLATDACTFGILIRCFCNVGLLDFALE--EESRGSRAAVHMMADDGYNCPPNVLSYNMVI 146

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF------ 299
           +GL K G   +A  LF EM+ +    P+ +TYN +IDG C+   +D+A+ +++       
Sbjct: 147 NGLFKEGEVDKAYTLFHEMLGQG-FPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQ 205

Query: 300 ----------MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
                     M   G  P+V  Y+ L++ +CK G+  EA+ +FD M      PD   Y T
Sbjct: 206 LEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRT 265

Query: 350 LINCFCRAG-----------------------------------RVDEALELLKEMKERG 374
           L++ +   G                                    +D+A+    EM+++G
Sbjct: 266 LLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKG 325

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++VT+  ++  LC+ G++E+A+    ++  +G+  +  ++  +++  C  GE +K  
Sbjct: 326 FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVE 385

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +L   M+ RG  P+    N ++  LCK G   +A      ++ +G KP+  S+ +L++  
Sbjct: 386 KLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGY 445

Query: 495 CRGRKLLFAFELLDELV 511
           C   K+  + +LL  +V
Sbjct: 446 CLDGKMDESIKLLGRMV 462



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 190/407 (46%), Gaps = 39/407 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QKGF+ N  TY T++D L +  + E   +   QM  E        F +L+     C++ E
Sbjct: 323 QKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL--CTIGE 380

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
                + K+     EK S + I+  ++                         PN    N 
Sbjct: 381 -----WKKV-----EKLSFEMINRGIH-------------------------PNAIFLNT 405

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++   CK G +  A +   ++    +  P++++Y+ LIDG C +G+  E+I+L   MVS 
Sbjct: 406 IMDSLCKEGRVLEAHDFFDQIIHVGVK-PDVVSYTILIDGYCLDGKMDESIKLLGRMVSI 464

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD +TY+ L++G+C+ G+VD A  +   M +    PN   Y  +++G    G++  
Sbjct: 465 G-LRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVA 523

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E + ++ +  ++     Y  ++   C    VDEAL + + ++ +  + ++ TFNI++ 
Sbjct: 524 AREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIV 583

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G+I +A  +   +   G+  +   Y +++    ++G LE++ EL   M   G   
Sbjct: 584 GLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTA 643

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +  T N ++ +L + G    A   L  + E  +  E+ +  LL+ ++
Sbjct: 644 NSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLISIV 690



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 28/283 (9%)

Query: 257 AIELFEEM--VSKDQILPDALTYNVLIDGFCRGGKVDRA--------KKIMEFMKNNG-- 304
           A+ LF  M  V  +++  DA T+ +LI  FC  G +D A        +  +  M ++G  
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA------- 357
           C PNV +Y  ++NG  KEG++ +A  +F EM      P+ + Y ++I+  C+A       
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 358 ---------GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
                    G+++EA+ LLK+M   G + D+VT+++++   C+ G+  EA  + + +   
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   +  +YR +L+    KG L    +LL LM+  G        N L+    K    + A
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKA 314

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             A   + + GF P   ++  +++++C+  ++  A     ++V
Sbjct: 315 MTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 206/394 (52%), Gaps = 5/394 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           ++ TY  ++         +A  ++LR+M  E  + ++     +++    C    + LE F
Sbjct: 24  SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
                +   +P + + +T +N L +  +VD A +  +        +PN   +N L+   C
Sbjct: 84  DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K+  L++A  V+ E +K   + P+++TY+TL+  L + GR  EA+  F +M +++  +P 
Sbjct: 144 KQDRLDAARAVITEARKRDFA-PDVVTYNTLMAALFQLGRVDEALATFTQM-TEEGYVPT 201

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +++N +I G CR  ++  A ++   M +   +PN+  Y+ +++G CK  +L EA+++ D
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M +   +PD + YT L+  F  AGR+D AL LL+ M  +GC  D+VT+ +++  LC+ G
Sbjct: 262 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 321

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++++A  +  +L  +    N  +Y  ++   C+   +++  +++R M CR   P+  T N
Sbjct: 322 RVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYN 378

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
            ++  L      E+A      + E GF P++ ++
Sbjct: 379 TMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 168/316 (53%), Gaps = 2/316 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +L  ++  +N+LI+  C    L++AF +L+EM    M   N  T S ++ GLC+ GR  +
Sbjct: 20  QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQC-NDRTTSIILQGLCRCGRVAQ 78

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNGCNPNVFNYTTL 315
           A+E F+  +      PD ++Y  LI+G C+ G+VD A  +   M    GC PN F Y  L
Sbjct: 79  ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNAL 138

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CK+ +L  A+ V  E +     PD + Y TL+    + GRVDEAL    +M E G 
Sbjct: 139 VDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGY 198

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
              +V+FN I+ GLCR  ++ +AL +  ++     + N  +Y +V++  C+  +L++A +
Sbjct: 199 VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQ 258

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M+  G  P       L++    AG  + A   L  +V  G  P+  ++ ++++ +C
Sbjct: 259 LLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLC 318

Query: 496 RGRKLLFAFELLDELV 511
           +  ++  A E+  ELV
Sbjct: 319 KVGRVDDAHEIFRELV 334



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 193/373 (51%), Gaps = 13/373 (3%)

Query: 146 HERVLEMFHKIHPITREKP-SLKAISTCLNLLIES--NQVDLAQNFLKYSNQHLR-LKPN 201
           H + L++F       RE P  L A S   N+LI    N  DL   F       +  ++ N
Sbjct: 7   HNQALQLF-------RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
               +I+++  C+ G +  A E      +   + P++++Y+TLI+GLCK GR   A +LF
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            +MV+     P+A TYN L+DG C+  ++D A+ ++   +     P+V  Y TLM    +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G++ EA   F +M      P  + +  +I   CRA R+ +ALE+  EM +R    ++VT
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR-IVLNFSCQKGELEKAIELLRLM 440
           +++++ GLC+  +++EA  +L+++  +G   +  +Y  +VL FS   G L+ A+ LLR M
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS-AAGRLDSALGLLRRM 298

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           + +G +P   T   ++ +LCK G  +DA      LV     P   +++ L+   CR  ++
Sbjct: 299 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358

Query: 501 LFAFELLDELVIK 513
               +++ E+  +
Sbjct: 359 DEGGKVMREMACR 371



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 17/357 (4%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET- 125
            L +C +  Q ALE F+   E      +  +Y T+++ L +  + +A   + R+M     
Sbjct: 69  GLCRCGRVAQ-ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG 127

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQV 182
           C+ +   +  L+         +R L+    +    R++   P +   +T +  L +  +V
Sbjct: 128 CRPNAFTYNALVDGLCK---QDR-LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRV 183

Query: 183 DLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           D A   F + + +     P    FN +I   C+   L  A EV  EM      +PNL+TY
Sbjct: 184 DEALATFTQMTEEGY--VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF-HPNLVTY 240

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S +IDGLCK+ +  EA +L + MVS+    PD + Y  L+ GF   G++D A  ++  M 
Sbjct: 241 SVVIDGLCKSDQLDEAQQLLDRMVSEG-CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           + GC P+V  YT +++  CK G++ +A E+F E+      P+ + Y+ LI  +CRA RVD
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           E  ++++EM    C+ ++VT+N ++ GL    + EEA GM  ++   G   +  +YR
Sbjct: 360 EGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 413



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 9/281 (3%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C+++   A     T + ++ F  +  TY T++  L +  + +   A   QMT E      
Sbjct: 143 CKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTL 202

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFL 189
             F  ++            LE+F+++  I R+  P+L   S  ++ L +S+Q+D AQ  L
Sbjct: 203 VSFNAIITGLCRARRLADALEVFNEM--IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
                    +P+   +  L+      G L+SA  +L+ M  SQ   P+++TY+ +ID LC
Sbjct: 261 DRMVSE-GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV-SQGCIPDVVTYTVVIDKLC 318

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K GR  +A E+F E+V+ ++  P+ +TY+ LI G+CR  +VD   K+M  M    C PNV
Sbjct: 319 KVGRVDDAHEIFRELVA-NKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNV 374

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
             Y T++ G     + +EA  +F EM      PD   Y  L
Sbjct: 375 VTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 4/224 (1%)

Query: 295 KIMEFMKNNGCN--PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           + ++  + N C    +   Y  L+ GFC    L  A  +  EM    ++ +    + ++ 
Sbjct: 9   QALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQ 68

Query: 353 CFCRAGRVDEALELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKL-WYDGI 410
             CR GRV +ALE      E    + D+V++  ++ GLC+ G+++ A  +  K+    G 
Sbjct: 69  GLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGC 128

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N  +Y  +++  C++  L+ A  ++     R F P   T N L+  L + G  ++A  
Sbjct: 129 RPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALA 188

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
               + E G+ P   S+  ++  +CR R+L  A E+ +E++ ++
Sbjct: 189 TFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 232


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 205/415 (49%), Gaps = 45/415 (10%)

Query: 148 RVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           +V +  H    + RE   +P+     T +N L +      A + L+   Q    KPNTCI
Sbjct: 157 KVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG-STKPNTCI 215

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++I+I   CK G L+ A  +L EMK+  +  P++ TYSTLID LCK  ++     LF EM
Sbjct: 216 YSIVIDAFCKDGMLDGATSLLNEMKQKSIP-PDIFTYSTLIDALCKLSQWENVRTLFLEM 274

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +  + I P+  T+N +IDG C+ GKV+ A++IM +M   G +P+V  Y  +++G+   G+
Sbjct: 275 IHLN-IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A+E+FD M N  ++P+ I Y  LIN + R  ++DEA+++ +E+ ++G K  IVT N+
Sbjct: 334 VDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 385 -----------------------------------ILGGLCREGKIEEALGMLEKLWYDG 409
                                              +LGG  + G +EEA+    KL    
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
              N   Y  V++  C+ G+L+KA      +   G  P   T   ++   C+ G+ ++A 
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK----ESGTIQV 520
             L  + + G   ++ ++ ++V    R  K+      L+E+  K    E+ T+++
Sbjct: 514 DMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVEL 568



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 182/351 (51%), Gaps = 17/351 (4%)

Query: 137 MKHFSNCSLHERVLEMFHKIH----PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           MKH+S+      V+ +F +IH    P+     S+   S CL    +     LA +F K  
Sbjct: 85  MKHYSS------VVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKK-- 136

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                +  N  IFN L++       ++ A  + K++ +  +  PN + Y T+++GLCK G
Sbjct: 137 ----GIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKG 192

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
             ++A +L   ++ +    P+   Y+++ID FC+ G +D A  ++  MK     P++F Y
Sbjct: 193 HTQKAFDLLR-LMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           +TL++  CK  + +  + +F EM +  + P+   + ++I+  C+ G+V++A E+++ M E
Sbjct: 252 STLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G   D++T+N+I+ G    G+++ A  + + +    I  N  SY I++N   ++ ++++
Sbjct: 312 KGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDE 371

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           A+++ R +  +G  P   T N LL  L + G  + A      ++  G  P+
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPD 422



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 162/323 (50%), Gaps = 2/323 (0%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           T+  PS+ + S  L  L+         +  +  ++ LR+  +  I +I++   C     +
Sbjct: 66  TKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHK-LRIPVHEFILSIVVNSCCLMHRTD 124

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
             F VL    K  + + N + ++TL+ GL    + ++A+ LF+++V ++   P+ + Y  
Sbjct: 125 LGFSVLAIHFKKGIPF-NQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGT 183

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +++G C+ G   +A  ++  M+     PN   Y+ +++ FCK+G L  A  + +EMK   
Sbjct: 184 VMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKS 243

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + PD   Y+TLI+  C+  + +    L  EM       ++ TFN ++ GLC+EGK+E+A 
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            ++  +   G+  +  +Y ++++    +G++++A E+   M+ +   P+  + N L+   
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGY 363

Query: 460 CKAGMAEDAAIALFGLVEMGFKP 482
            +    ++A      + + G KP
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKP 386



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/296 (19%), Positives = 126/296 (42%), Gaps = 36/296 (12%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ AF + ++M +++   P+++++S L+  L     +   + LF E + K +I       
Sbjct: 53  LDDAFSLFRQMVRTK-PLPSVVSFSKLLKALVHMKHYSSVVSLFRE-IHKLRIPVHEFIL 110

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           +++++  C   + D    ++      G   N   + TL+ G   E K+++A  +F ++  
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKL-- 168

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
                                           ++E  C+ + V +  ++ GLC++G  ++
Sbjct: 169 --------------------------------VRENICEPNEVMYGTVMNGLCKKGHTQK 196

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L  +       N   Y IV++  C+ G L+ A  LL  M  +   P   T + L+ 
Sbjct: 197 AFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            LCK    E+       ++ +   P   ++  +++ +C+  K+  A E++  ++ K
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK 312


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 214/439 (48%), Gaps = 11/439 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E++ T+ E  G      TY T+LD   +  K +    +L +M    C  ++  +  L+
Sbjct: 218 AVEVYRTMGE-FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYSNQH 195
              S     E+   +  ++      K  LK  +   N LI    N+  LA+         
Sbjct: 277 NGLSKKGEFEQAKGLIGEML-----KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331

Query: 196 LR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           L+   P    +N  I   CK G +  A + L +M  + +  P++++Y+TLI G C+ G  
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNL-LPDVVSYNTLIYGYCRLGNL 390

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  LF+E+ S   + P  +TYN L+DG CR G+++ A+++   M N G  P++  YT 
Sbjct: 391 MKAFLLFDELRSI-YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK G L  A+E FDEM +  L+ D+  Y T I    + G    A  L +EM  +G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D++ +N+++ GLC+ G +EEA  +L+K+  DG+  +  +Y  +++   + G L K  
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           E+   ML +G  P   T   L+      G  E A I    + E G  P   ++  L+  +
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629

Query: 495 CRGRKLLFAFELLDELVIK 513
           C+ R++  A+    E+V K
Sbjct: 630 CKVRRMDQAYNFFAEMVEK 648



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 165/298 (55%), Gaps = 3/298 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T L+ L    ++++AQ  LK    +  + P+   + IL+   CK G+L  A E
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQ-LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
              EM    +   +   Y+T I G  K G    A  L EEM++K    PD + YNV++DG
Sbjct: 466 FFDEMLHEGLELDSY-AYATRIVGELKLGDTSRAFSLQEEMLAKG-FPPDLIIYNVVVDG 523

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G ++ A ++++ M ++G  P+   YT++++   + G+L++ +E+F EM +  L P 
Sbjct: 524 LCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPS 583

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + YT LI+     GR++ A     EM+E+G   +++T+N ++ GLC+  ++++A     
Sbjct: 584 VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFA 643

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           ++   GI+ NK SY I++N +C  G  ++A+ L + ML RG  P   T + LL +L K
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 200/411 (48%), Gaps = 8/411 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   N+ TY  +++ L++  +FE    ++ +M     K     +  L+  + N  + 
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCI 204
              L +  ++  +    P++   ++ +  L +  ++  A   L    +N    L P+   
Sbjct: 321 AEALSLQEEM-VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN---LLPDVVS 376

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI  +C+ G L  AF +  E++   + +P ++TY+TL+DGLC+ G    A +L  EM
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYL-FPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           ++ + I PD +TY +L++G C+ G +  A++  + M + G   + + Y T + G  K G 
Sbjct: 436 IN-EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
              A  + +EM      PD I Y  +++  C+ G ++EA ELL++M   G   D VT+  
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           I+      G++ +   +  ++   G+  +  +Y ++++    KG LE+A      M  +G
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            LP+  T N L+  LCK    + A      +VE G  P   S+ +L+   C
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENC 665



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 12/309 (3%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH--FSNCSLHERVLEMF 153
            TY T+LD L R  + E    V +Q+  E    +EGI  +++ +    N S     L M 
Sbjct: 410 VTYNTLLDGLCRQGELE----VAQQLKVEM--INEGIAPDIVTYTILVNGSCKMGSLSMA 463

Query: 154 HKI-HPITREKPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKH 211
            +    +  E   L + +    ++ E    D ++ F L+         P+  I+N+++  
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 523

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CK G LE A E+L++M  S    P+ +TY+++I    +NGR R+  E+F EM+SK  + 
Sbjct: 524 LCKLGNLEEASELLQKMV-SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-LT 581

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P  +TY VLI G    G+++RA      M+  G  PNV  Y +L+NG CK  ++ +A   
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNF 641

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F EM    + P+   YT LIN  C  G   EAL L K+M +RG + D  T + +L  L +
Sbjct: 642 FAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701

Query: 392 EGKIEEALG 400
           + K++   G
Sbjct: 702 DCKLQAVHG 710



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 126/233 (54%)

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           ++LI  + +   V++   + + M  +  +P+V N   ++     +  + +A EV+  M  
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
           F +KP  + Y TL++ +C+ G+V + L+LL EM+ RGC  + VT+N+++ GL ++G+ E+
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A G++ ++   G+ ++  +Y  ++     KG L +A+ L   M+ +G  P  AT N  + 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LCK G   DA   L  ++     P+  S+  L+   CR   L+ AF L DEL
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 1/268 (0%)

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI    K     + + +F++M+ K ++ PD    N ++        + +A ++   M   
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMI-KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P +  Y TL++ +CK GK+Q+  ++  EM+     P+ + Y  LIN   + G  ++A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             L+ EM + G K    T+N ++ G   +G + EAL + E++   G     A+Y   +  
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G +  A++ L  ML    LP   + N L+   C+ G    A +    L  +   P 
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             ++  L++ +CR  +L  A +L  E++
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMI 436



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 35/195 (17%)

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           + K+  +++   VFD+M    L PD      ++        + +A+E+ + M E G K  
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 233

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           IVT+N +L   C+ GK+++ L +L ++   G   N  +Y +++N   +KGE E+A  L+ 
Sbjct: 234 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 293

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            ML  G      T N L+      GM  +A                              
Sbjct: 294 EMLKTGLKVSAYTYNPLIYGYFNKGMLAEA------------------------------ 323

Query: 499 KLLFAFELLDELVIK 513
                  L +E+V+K
Sbjct: 324 -----LSLQEEMVLK 333


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 153/254 (60%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+   FN L+  + K G L+  F +   M  S  + P++ TYS LI+GLCK  +  EA
Sbjct: 167 LKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASG-AQPDVYTYSVLINGLCKESKMDEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ GK+D A +I + + + G +P++  Y TL+ 
Sbjct: 226 HELFDEMLEKG-LVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK+G L++ +++ DEM    LKPD I YTTLI+  C+ G ++ A E  K+M E   + 
Sbjct: 285 GFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y IV+N  C+ G++    +LL
Sbjct: 345 DDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLL 404

Query: 438 RLMLCRGFLPHYAT 451
           + M   G +P   T
Sbjct: 405 KEMQRDGHVPSVVT 418



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 189/351 (53%), Gaps = 7/351 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP-NTCIFNILIKHHCKRGTLES 220
           ++  +   S  +   +ES  +  A    + S +H    P +TC    ++ H  K    + 
Sbjct: 62  QRSDIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTC--RKVLDHLMKLKYFKL 119

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            +   KE+   +  YP +L  ++ L+   CK G  R A +L  + ++K  + P  +++N 
Sbjct: 120 VWGFYKEI--LECGYPASLYFFNILMHRFCKEGEIRLA-QLVFDAITKWGLKPSVVSFNT 176

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L++G+ + G +D   ++   M  +G  P+V+ Y+ L+NG CKE K+ EA E+FDEM    
Sbjct: 177 LMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKG 236

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + +TTLI+  C+ G++D A+E+ K++  +G   D++T+N ++ G C++G +++  
Sbjct: 237 LVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTR 296

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +++++   G+  +K +Y  +++ SC++G+LE A E  + M+             L+  L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGL 356

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           CK G + DA   L  ++ +G KP+S ++ +++   C+   +    +LL E+
Sbjct: 357 CKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEM 407



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 154/308 (50%), Gaps = 25/308 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           + +  + F  + E K +Q S  ++  +S LI    ++G  R+A+E F         +P  
Sbjct: 45  KDSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFD 102

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         K+I+E     G   +++ +  LM+ FCKEG
Sbjct: 103 TCRKVLDHLMKLKYFKLVWGF--------YKEILE----CGYPASLYFFNILMHRFCKEG 150

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +++ A+ VFD +  + LKP  + + TL+N + + G +DE   L   M   G + D+ T++
Sbjct: 151 EIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYS 210

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K++EA  + +++   G+  N  ++  +++  C+ G+L+ A+E+ + +L +
Sbjct: 211 VLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQ 270

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T N L+   CK G  +     +  +   G KP+  ++  L++  C+   L  A
Sbjct: 271 GLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330

Query: 504 FELLDELV 511
           FE   +++
Sbjct: 331 FEYRKKMI 338



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/302 (20%), Positives = 127/302 (42%), Gaps = 41/302 (13%)

Query: 251 NGRFREAIELFEEMVS---KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN- 306
           N  FR  +  +  M+      Q+LP+A +   +I    R GK   +      ++  G   
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQVI--VSRKGKDSASAVFAAILETKGTQR 63

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVF--DEMKNFLLKPDTI------------------- 345
            +++ ++ L+  + + G L++A E F       F +  DT                    
Sbjct: 64  SDIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGF 123

Query: 346 -------GY-------TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
                  GY         L++ FC+ G +  A  +   + + G K  +V+FN ++ G  +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIK 183

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G ++E   +   +   G   +  +Y +++N  C++ ++++A EL   ML +G +P+  T
Sbjct: 184 MGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVT 243

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L+   CK G  + A      ++  G  P+  ++  L+   C+   L    +L+DE+ 
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMS 303

Query: 512 IK 513
           +K
Sbjct: 304 MK 305


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 211/421 (50%), Gaps = 4/421 (0%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T+ T++  L    K      ++ +M    C+     + +++            
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L++  K+      K  +   ST ++ L     +D A +  K   +   +K +   +N L+
Sbjct: 203 LDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFK-EMETKGIKSSVVTYNSLV 260

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
           +  CK G       +LK+M   ++  PN+IT++ L+D   K G+ +EA EL++EM+++  
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITRG- 318

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ +TYN L+DG+C   ++  A  +++ M  N C+P++  +T+L+ G+C   ++ +  
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +VF  +    L  + + Y+ L+  FC++G++  A EL +EM   G   D++T+ I+L GL
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 438

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  GK+E+AL + E L    + L    Y  ++   C+ G++E A  L   + C+G  P+ 
Sbjct: 439 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 498

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T   ++  LCK G   +A I L  + E G  P   ++  L+    R   L  + +L++E
Sbjct: 499 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 558

Query: 510 L 510
           +
Sbjct: 559 M 559



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 166/302 (54%), Gaps = 2/302 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN+L+    K G L+ A E+ KEM    +S PN+ITY+TL+DG C   R  EA  
Sbjct: 286 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANN 344

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + MV +++  PD +T+  LI G+C   +VD   K+   +   G   N   Y+ L+ GF
Sbjct: 345 MLDLMV-RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ GK++ A+E+F EM +  + PD + Y  L++  C  G++++ALE+ +++++      I
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +  I+ G+C+ GK+E+A  +   L   G+  N  +Y ++++  C+KG L +A  LLR 
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G  P+  T N L+    + G    +A  +  +   GF  ++ S  ++++++    K
Sbjct: 524 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583

Query: 500 LL 501
            L
Sbjct: 584 RL 585



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 179/353 (50%), Gaps = 5/353 (1%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PSL   S   + +  + Q +L  +F K    +  +  N    NI+I   C+     
Sbjct: 72  SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTC 130

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A+ VL ++ K  + Y P+  T++TLI GL   G+  EA+ L + MV ++   PD +TYN
Sbjct: 131 FAYSVLGKVMK--LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV-ENGCQPDVVTYN 187

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            +++G CR G    A  ++  M+      +VF Y+T+++  C++G +  A  +F EM+  
Sbjct: 188 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 247

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            +K   + Y +L+   C+AG+ ++   LLK+M  R    +++TFN++L    +EGK++EA
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             + +++   GI  N  +Y  +++  C +  L +A  +L LM+     P   T   L+  
Sbjct: 308 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            C     +D       + + G    + ++++LV+  C+  K+  A EL  E+V
Sbjct: 368 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 420



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 1/258 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI LF+EM+ + + LP  + ++       R  + +      + ++ NG   N++    +
Sbjct: 61  DAIALFQEMI-RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N FC+  K   A  V  ++     +PDT  + TLI      G+V EA+ L+  M E GC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D+VT+N I+ G+CR G    AL +L K+    +  +  +Y  +++  C+ G ++ AI 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L + M  +G      T N L+  LCKAG   D A+ L  +V     P   ++ +L+++  
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 496 RGRKLLFAFELLDELVIK 513
           +  KL  A EL  E++ +
Sbjct: 300 KEGKLQEANELYKEMITR 317



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++ T+ +A E+ KEM +  ++ PN ITYS+LIDG CK  R  EA ++ + MV+K
Sbjct: 711 RKMTVVTAEELHKEMIQRGIA-PNTITYSSLIDGFCKENRLDEANQMLDLMVTK 763



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           A EL +EM+ +  I P+ +TY+ LIDGFC+  ++D A ++++ M   G
Sbjct: 718 AEELHKEMIQRG-IAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E+  EM    + P+TI Y++LI+ FC+  R+DEA ++L  M  +G  +DI     +L 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG-DSDI---RYLLA 773

Query: 388 GLCREGK 394
           GL R+ +
Sbjct: 774 GLMRKKR 780



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGR---VDEALELLKEMKERGCKADIVTFNIILGGL 389
           D M +  L  D + Y        R GR   V  A EL KEM +RG   + +T++ ++ G 
Sbjct: 685 DLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGF 744

Query: 390 CREGKIEEALGMLEKLWYDG 409
           C+E +++EA  ML+ +   G
Sbjct: 745 CKENRLDEANQMLDLMVTKG 764



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 268 DQILP-DALTYNVLIDGFCRGGK---VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           D  LP DA+ Y        R G+   V  A+++ + M   G  PN   Y++L++GFCKE 
Sbjct: 689 DLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKEN 748

Query: 324 KLQEAKEVFDEM 335
           +L EA ++ D M
Sbjct: 749 RLDEANQMLDLM 760


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 178/312 (57%), Gaps = 1/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKS-QMSYPNLITYSTLIDGLCKNGRFREAI 258
           P+    ++LI   CK   ++ A E L+ M ++      +  +Y++L++ LCK  +  +A 
Sbjct: 82  PDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAF 141

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +F  MVS+  ++PD ++Y++LIDGFC+  ++ RA+K+ + M +  C PNV  Y   +NG
Sbjct: 142 AIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 201

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
             ++G++ +A+ V++EM +    PD I Y+TLI+ F  A + D+A EL + M  RGC+ +
Sbjct: 202 LMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPN 261

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            VT+N +L GLC+E K +EA  +  K+   G   +K +Y  +L   C  G++E+A+E+  
Sbjct: 262 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFD 321

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+ +G  P     N LL    +AG   +A      +V    KP++ S  ++++ + + +
Sbjct: 322 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAK 381

Query: 499 KLLFAFELLDEL 510
           +L  A E+ + +
Sbjct: 382 RLDDAVEVFERM 393



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 200/395 (50%), Gaps = 19/395 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGI 132
           AL +  T+  ++G+  + AT++ ++++L +  K +     L+ M     T  +  F    
Sbjct: 68  ALSLLETMI-KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNS 126

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFL 189
            LN     S C   ++V + F     +  E+   P + + S  ++   + +++  A+   
Sbjct: 127 LLN-----SLCKA-KKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           K     L   PN   +N  +    ++G +  A  V +EM  +  S P++ITYSTLI G  
Sbjct: 181 KQMID-LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCS-PDVITYSTLIHGFS 238

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
              +  +A ELFE M+S+    P+A+TYN L+ G C+  K D A ++   M   GC+P+ 
Sbjct: 239 LARKHDQAHELFEAMISRG-CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDK 297

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             YTTL+ GFC  GK+++A EVFDEM +    PD + Y  L+  F RAG+  EA +L + 
Sbjct: 298 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV 357

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD-GIYLNKASYRIVLNFSCQKG 428
           M  R CK D V+ NI++ GL +  ++++A+ + E++  D G   +  +Y  ++   C + 
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 417

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            L +A+++ + +      P     N LL  +  AG
Sbjct: 418 RLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 42/318 (13%)

Query: 237 NLITYSTLIDGLCKNGRFREAIE------------------------------------- 259
           N + ++  + GLCK+G+  +A E                                     
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 260 -LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN--PNVFNYTTLM 316
            L E M+ K    PD  T+++LI+  C+  K+  A++ ++ M         + F+Y +L+
Sbjct: 70  SLLETMI-KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLL 128

Query: 317 NGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           N  CK  K+ +A  +F  M     + PD + Y+ LI+ FC+   +  A +L K+M +  C
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             ++ T+N  L GL R+G+I +A G+ E++   G   +  +Y  +++      + ++A E
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   M+ RG  P+  T N LL  LCK    ++A      +VE G  P+  ++  L+   C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 496 RGRKLLFAFELLDELVIK 513
              K+  A E+ DE+V K
Sbjct: 309 NVGKIEQAVEVFDEMVSK 326



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 380 VTFNIILGGLCREGKIE---EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           V +   LGGLC+ GKIE   EA   +++        +  +   V+   C+ G ++ A+ L
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD--SWALLVELI 494
           L  M+ RG+ P  AT + L+  LCKA   ++A   L G+        S   S+  L+  +
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSL 131

Query: 495 CRGRKLLFAFELLDELVIKES 515
           C+ +K+  AF +   +V + S
Sbjct: 132 CKAKKVHQAFAIFSTMVSERS 152


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 204/399 (51%), Gaps = 4/399 (1%)

Query: 98   YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
            +  +L  +A+  KF+ V  +  +M           F  L+  F  CS     L +  K+ 
Sbjct: 618  FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM 677

Query: 158  PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
             +  + PS+  + + LN   + N+   A + +  S   L L+PN  I+N +I   CK   
Sbjct: 678  KLGFQ-PSIVTLGSLLNGFCQGNRFQEAVSLVD-SMAELGLEPNVVIYNTVINGLCKNRD 735

Query: 218  LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            L +A E+   M+K  +   + +TY+TLI GLC +GR+ +A  L  +MV K +I P+ + +
Sbjct: 736  LNNALEIFYGMEKKGI-VADAVTYNTLISGLCNSGRWTDAARLLRDMV-KRKIDPNVIFF 793

Query: 278  NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
              LID F + G +  AK + + M     +PN+  Y +L+NGFC +G+L +AK +FD M +
Sbjct: 794  TALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS 853

Query: 338  FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
                PD + Y TLI  FC++ RV++ ++L  EM  +G   D  T+N ++ G C+ GK+  
Sbjct: 854  KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNV 913

Query: 398  ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
            A  +  ++   G+  +  +Y I+L+  C  G++EKA+ ++  +          T N ++ 
Sbjct: 914  AQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQ 973

Query: 458  RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             +C+    ++A      L   G K ++ ++  ++  +CR
Sbjct: 974  GMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 206/421 (48%), Gaps = 5/421 (1%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  +L  +A  +++E V    +QM           F  L+  F  CS     L +  K+ 
Sbjct: 68  FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMM 127

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +  + PS+    + L+     N++  A + +  S      +PN  ++N LI   CK G 
Sbjct: 128 KLGYD-PSIVTFGSLLHGFCLRNRIHDAFSLVA-SMVKSGYEPNVVVYNTLIDCLCKNGD 185

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +  A E+L EM+K      +L+TY+TL+ GLC +G +R+A  +  +M +K +I PD  T+
Sbjct: 186 VNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM-TKRRINPDVFTF 244

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
             LID F + G +D A+++ + M  +   PN   Y +L+NG C  G+L  AK+ FD M +
Sbjct: 245 TALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS 304

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               P+ + Y TLIN FC++ RV++ ++L + M   G   D  T+N ++ G C+ GK+  
Sbjct: 305 KGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRV 364

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +   +   G+  +  ++ I+L+  C  GE+  A+     M            N ++ 
Sbjct: 365 AKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIH 424

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
            LCKA   E+A      L   G KP++ ++ +++  +C+      A EL   +  KE G 
Sbjct: 425 GLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRM--KEDGI 482

Query: 518 I 518
           I
Sbjct: 483 I 483



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 194/371 (52%), Gaps = 12/371 (3%)

Query: 90   GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
            GF  +  T  ++L+   +  +F+   +++  M     + +  I+  ++            
Sbjct: 680  GFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNA 739

Query: 150  LEMFHKIHPITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            LE+F+ +     EK  + A +   N LI     S +   A   L+   +  ++ PN   F
Sbjct: 740  LEIFYGM-----EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR-KIDPNVIFF 793

Query: 206  NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
              LI    K G L  A  + KEM +  + +PN++TY++LI+G C  GR  +A  +F+ MV
Sbjct: 794  TALIDTFVKEGNLLEAKNLYKEMIRRSV-HPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852

Query: 266  SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            SK    PD +TYN LI GFC+  +V+   K+   M + G   + F Y TL++G+C+ GKL
Sbjct: 853  SKG-CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911

Query: 326  QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
              A++VF+ M +  + PD + Y  L++C C  G++++AL +++++++     DI+T+NII
Sbjct: 912  NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971

Query: 386  LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
            + G+CR  K++EA  +   L   G+ L+  +Y  +++  C+ G   +A +L   M   GF
Sbjct: 972  IQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGF 1031

Query: 446  LPHYATSNELL 456
            +P     +E L
Sbjct: 1032 MPSERIYDETL 1042



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 196/389 (50%), Gaps = 7/389 (1%)

Query: 82  FNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS 141
           F+   E  G +H+  ++  ++    R  +     ++L +M           F +L+  F 
Sbjct: 87  FSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFC 146

Query: 142 NCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
              L  R+ + F  +  + +   +P++   +T ++ L ++  V++A   L    +  RL 
Sbjct: 147 ---LRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLA 203

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            +   +N L+   C  G    A  +L++M K +++ P++ T++ LID   K G   EA E
Sbjct: 204 ADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRIN-PDVFTFTALIDAFVKQGNLDEAQE 262

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+++M+ +  I P+ +TYN LI+G C  G++  AKK  + M + GC PNV  Y TL+NGF
Sbjct: 263 LYKQML-QSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGF 321

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  ++++  ++F  M    L  DT  Y TLI+ +C+ G++  A ++   M   G   DI
Sbjct: 322 CKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDI 381

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T  I+L GLC  G+I  A+     +     YL   +Y I+++  C+  ++E+A EL   
Sbjct: 382 ITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCR 441

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +   G  P   T   +++ LCK G   +A
Sbjct: 442 LPVEGVKPDARTYTIMILGLCKNGPRREA 470



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 186/365 (50%), Gaps = 4/365 (1%)

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           V+ +FHK+  +      L + +  ++     ++  LA   L      L  +P+      L
Sbjct: 634 VIYLFHKMENLGISH-DLYSFTILIHCFCRCSRFSLALALLG-KMMKLGFQPSIVTLGSL 691

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +   C+    + A  ++  M +  +  PN++ Y+T+I+GLCKN     A+E+F  M  K 
Sbjct: 692 LNGFCQGNRFQEAVSLVDSMAELGLE-PNVVIYNTVINGLCKNRDLNNALEIFYGM-EKK 749

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            I+ DA+TYN LI G C  G+   A +++  M     +PNV  +T L++ F KEG L EA
Sbjct: 750 GIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 809

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           K ++ EM    + P+ + Y +LIN FC  GR+ +A  +   M  +GC  D+VT+N ++ G
Sbjct: 810 KNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITG 869

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C+  ++E+ + +  ++ + G+  +  +Y  +++  CQ G+L  A ++   M+  G  P 
Sbjct: 870 FCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPD 929

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N LL  LC  G  E A + +  L +     +  ++ ++++ +CR  K+  A+ L  
Sbjct: 930 IVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFR 989

Query: 509 ELVIK 513
            L  K
Sbjct: 990 SLTRK 994



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 169/314 (53%), Gaps = 11/314 (3%)

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           LE+ +++    R    L   +T L  L  S +   A   L+   +  R+ P+   F  LI
Sbjct: 190 LELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR-RINPDVFTFTALI 248

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
               K+G L+ A E+ K+M +S +  PN +TY++LI+GLC +GR   A + F+ M SK  
Sbjct: 249 DAFVKQGNLDEAQELYKQMLQSSIG-PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG- 306

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ +TYN LI+GFC+  +V+   K+ + M   G   + F Y TL++G+C+ GKL+ AK
Sbjct: 307 CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAK 366

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++F  M +  + PD I +  L++  C  G +  A+    +M+       IV +NI++ GL
Sbjct: 367 DIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGL 426

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM-----LCR- 443
           C+  K+EEA  +  +L  +G+  +  +Y I++   C+ G   +A EL R M     +C+ 
Sbjct: 427 CKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQA 486

Query: 444 --GFLPHYATSNEL 455
             G L  + T+N++
Sbjct: 487 EDGHLGEHGTNNQV 500



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ ++T ++    K  K      +F +M+N  +  D   +T LI+CFCR  R   AL L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M + G +  IVT   +L G C+  + +EA+ +++ +   G+  N   Y  V+N  C+
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
             +L  A+E+   M  +G +    T N L+  LC +G   DAA  L  +V+    P    
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           +  L++   +   LL A  L  E++
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMI 817



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 37/290 (12%)

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G   + RF +A++LF EMV + Q LP  + +  L+       + +      + M+  G +
Sbjct: 39  GFLHSIRFEDALDLFLEMV-QSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGIS 97

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEM----------------KNFLLK--------- 341
            +++++T L++ FC+  +L  A  +  +M                  F L+         
Sbjct: 98  HDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSL 157

Query: 342 ----------PDTIGYTTLINCFCRAGRVDEALELLKEMKERG-CKADIVTFNIILGGLC 390
                     P+ + Y TLI+C C+ G V+ ALELL EM+++G   AD+VT+N +L GLC
Sbjct: 158 VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC 217

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
             G+  +A  +L  +    I  +  ++  +++   ++G L++A EL + ML     P+  
Sbjct: 218 YSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTV 277

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           T N L+  LC  G    A      +   G  P   ++  L+   C+ R++
Sbjct: 278 TYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 1/261 (0%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +F +A  LF EM+    I P  + +  ++    +  K D    +   M+N G + +++++
Sbjct: 595 KFDDAFGLFCEMLQSRPI-PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L++ FC+  +   A  +  +M     +P  +   +L+N FC+  R  EA+ L+  M E
Sbjct: 654 TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + ++V +N ++ GLC+   +  AL +   +   GI  +  +Y  +++  C  G    
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  LLR M+ R   P+      L+    K G   +A      ++     P   ++  L+ 
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833

Query: 493 LICRGRKLLFAFELLDELVIK 513
             C   +L  A  + D +V K
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSK 854



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 1/211 (0%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+V ++T L+       + +       +M+ F +  D   +T LI+CFCR  R+  AL +
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M + G    IVTF  +L G C   +I +A  ++  +   G   N   Y  +++  C+
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182

Query: 427 KGELEKAIELLRLMLCRGFL-PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
            G++  A+ELL  M  +G L     T N LL  LC +G    AA  L  + +    P+  
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242

Query: 486 SWALLVELICRGRKLLFAFELLDELVIKESG 516
           ++  L++   +   L  A EL  +++    G
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIG 273


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 215/459 (46%), Gaps = 74/459 (16%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  +Y  +L  L   K++  V  ++ +M    C  +   F  L+ +     L ERV
Sbjct: 259 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 318

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E+  +                    ++E                     P+  ++  +I
Sbjct: 319 HEVLAQ--------------------MVEHG-----------------CTPDIRMYATII 341

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G LE A E+L  M    +  PN++ Y+TL+ GLC   R+ E  EL  EM  KD 
Sbjct: 342 DGICKEGHLEVAHEILNRMPSYGLK-PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 400

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            L D +T+N+L+D FC+ G VDR  +++E M  +GC P+V  YTT++NGFCKEG + EA 
Sbjct: 401 PL-DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 459

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +   M     KP+TI YT ++   C A R  +A +L+ +M ++GC  + +TFN ++  L
Sbjct: 460 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 519

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH- 448
           C++G +E+A+ +L+++  +G   +  SY  V++   + G+ ++A+ELL +M+ +G  P+ 
Sbjct: 520 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 579

Query: 449 --YAT--------------------------------SNELLVRLCKAGMAEDAAIALFG 474
             Y++                                 N ++  LCK G  E A   L  
Sbjct: 580 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY 639

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +V  G  P   ++ +L+  +     +  A E+L EL  K
Sbjct: 640 MVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 678



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 204/423 (48%), Gaps = 10/423 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++  L    +     AVL +M    C     ++  +++           + + 
Sbjct: 158 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 217

Query: 154 HKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
             +H     +     +  C   LN + +   VD A + L+        +P+   +N ++K
Sbjct: 218 EDLH----ARGCALDVGNCNLVLNAICDQGSVDEALHLLR-DLPSFGCEPDVVSYNAVLK 272

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             C         E+++EM +     PN++T++TLI  LC+NG F    E+  +MV +   
Sbjct: 273 GLCMAKRWGCVQELMEEMVRMACP-PNIVTFNTLISYLCRNGLFERVHEVLAQMV-EHGC 330

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PD   Y  +IDG C+ G ++ A +I+  M + G  PNV  Y TL+ G C   + +E +E
Sbjct: 331 TPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 390

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  EM +     D + +  L++ FC+ G VD  +ELL++M E GC  D++T+  ++ G C
Sbjct: 391 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC 450

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           +EG I+EA+ +L+ +   G   N  SY IVL   C       A +L+  M+ +G   +  
Sbjct: 451 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 510

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N L+  LCK G+ E A   L  ++  G  P+  S++ +++ + +  K   A ELL+ +
Sbjct: 511 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 570

Query: 511 VIK 513
           V K
Sbjct: 571 VNK 573



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 168/348 (48%), Gaps = 35/348 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +  +++  C RG +  A  VL EM +   + P    Y  +++  C+ G FR A
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCA-PIPPMYHVILEAACRGGGFRSA 213

Query: 258 IELFEEMVSK----------------------DQIL------------PDALTYNVLIDG 283
           + + E++ ++                      D+ L            PD ++YN ++ G
Sbjct: 214 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 273

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C   +    +++ME M    C PN+  + TL++  C+ G  +   EV  +M      PD
Sbjct: 274 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 333

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y T+I+  C+ G ++ A E+L  M   G K ++V +N +L GLC   + EE   +L 
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           +++     L+  ++ I+++F CQ G +++ IELL  ML  G +P   T   ++   CK G
Sbjct: 394 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 453

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + ++A + L  +   G KP + S+ ++++ +C   + + A +L+ +++
Sbjct: 454 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 501



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 189/363 (52%), Gaps = 12/363 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS--- 144
           + G   +   YATI+D + +    E    +L +M     K +   +  L+K   +     
Sbjct: 327 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWE 386

Query: 145 -LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
              E + EMF K  P+     ++     C N L++   ++L +  L++        P+  
Sbjct: 387 ETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD-RVIELLEQMLEHG-----CMPDVI 440

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +  +I   CK G ++ A  +LK M       PN I+Y+ ++ GLC   R+ +A +L  +
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSMTACGCK-PNTISYTIVLKGLCSAERWVDAEDLMSQ 499

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ +   L + +T+N LI+  C+ G V++A ++++ M  NGC+P++ +Y+T+++G  K G
Sbjct: 500 MIQQGCPL-NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 558

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K  EA E+ + M N  + P+TI Y+++ +   R GR+++ +++   +++   ++D V +N
Sbjct: 559 KTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYN 618

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++  LC+ G+ E A+  L  +   G   N+++Y I++     +G +++A E+L  +  +
Sbjct: 619 AVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 678

Query: 444 GFL 446
           G L
Sbjct: 679 GAL 681



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 5/307 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++  +C+ G LESA    + +  +    PN  TY  ++  LC  GR  +A+ + +EM
Sbjct: 130 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 185

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +    P    Y+V+++  CRGG    A +++E +   GC  +V N   ++N  C +G 
Sbjct: 186 -PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 244

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  +  ++ +F  +PD + Y  ++   C A R     EL++EM    C  +IVTFN 
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR G  E    +L ++   G   +   Y  +++  C++G LE A E+L  M   G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+    N LL  LC A   E+    L  + +     +  ++ +LV+  C+   +    
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 424

Query: 505 ELLDELV 511
           ELL++++
Sbjct: 425 ELLEQML 431



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 130/277 (46%), Gaps = 10/277 (3%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ ++ G C+ G+   A      + +   + P+A TY  ++   C  G++  A  +++ M
Sbjct: 130 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 185

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              GC P    Y  ++   C+ G  + A  V +++       D      ++N  C  G V
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLC---REGKIEEALGMLEKLWYDGIYLNKASY 417
           DEAL LL+++   GC+ D+V++N +L GLC   R G ++E   ++E++       N  ++
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTF 302

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++++ C+ G  E+  E+L  M+  G  P       ++  +CK G  E A   L  +  
Sbjct: 303 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 362

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            G KP    +  L++ +C   +     ELL E+  K+
Sbjct: 363 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 399



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 29/197 (14%)

Query: 344 TIGYTTLINCFCRAGRVDEALELL------------KEMKERGCKA-------------- 377
           ++  ++LI   C AGR  EA   L              M    C+A              
Sbjct: 95  SVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAVP 154

Query: 378 ---DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +  T+  ++  LC  G+I +AL +L+++   G       Y ++L  +C+ G    A+
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +L  +  RG        N +L  +C  G  ++A   L  L   G +P+  S+  +++ +
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274

Query: 495 CRGRKLLFAFELLDELV 511
           C  ++     EL++E+V
Sbjct: 275 CMAKRWGCVQELMEEMV 291


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 171/312 (54%), Gaps = 2/312 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN  +++ +I   CK   +  A+ +  EM    +S  +++TYSTLI G C  G+ +EAI
Sbjct: 196 KPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS-ADVVTYSTLIYGFCIEGKLKEAI 254

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L  EMV K  I P+  TYN+L+D  C+ GKV  AK ++  M      P+V  Y+TLM+G
Sbjct: 255 GLLNEMVLK-TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +    ++++A+ VF+ M    + PD   YT LIN FC+   VDEAL L KEM ++     
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           IVT++ ++ GLC+ G+I     +++++   G   N  +Y  +++  C+ G L++AI L  
Sbjct: 374 IVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFN 433

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  +G  P+  T   LL  LCK G  +DA      L+  G+     ++ ++++  C+  
Sbjct: 434 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQG 493

Query: 499 KLLFAFELLDEL 510
            L  A  +L ++
Sbjct: 494 LLEEALTMLSKM 505



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 211/422 (50%), Gaps = 16/422 (3%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHERVL-EMF 153
           +  ILD  A+ K +    ++  ++  +  +       I +N   H    +    VL ++ 
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNILIKHH 212
            + +P     P    ++T +  L    QV  A +F  K   Q  +L  N   +  LI   
Sbjct: 122 KRGYP-----PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL--NQVSYGTLINGV 174

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G   +A ++L+++   +++ PN++ YST+ID LCK     EA  LF EM  K  I  
Sbjct: 175 CKIGDTRAAIKLLQKID-GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKG-ISA 232

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D +TY+ LI GFC  GK+  A  ++  M     NPNV+ Y  L++  CKEGK++EAK V 
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
             M    +KPD I Y+TL++ +     V +A  +   M   G   D+ T+ I++ G C+ 
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
             ++EAL + +++    +     +Y  +++  C+ G +    +L+  M  RG   +  T 
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITY 412

Query: 453 NELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + L+  LCK G   D AIALF  + + G +P + ++ +L++ +C+G +L  A E+  +L+
Sbjct: 413 SSLIDGLCKNGHL-DRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLL 471

Query: 512 IK 513
            K
Sbjct: 472 TK 473



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 151/264 (57%), Gaps = 2/264 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +NIL+   CK G ++ A  VL  M K+ +  P++ITYSTL+DG       ++A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK-PDVITYSTLMDGYFLVYEVKKA 323

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F  M S   + PD  TY +LI+GFC+   VD A  + + M      P +  Y++L++
Sbjct: 324 QHVFNAM-SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G++    ++ DEM +     + I Y++LI+  C+ G +D A+ L  +MK++G + 
Sbjct: 383 GLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRP 442

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +  TF I+L GLC+ G++++A  + + L   G +LN  +Y ++++  C++G LE+A+ +L
Sbjct: 443 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTML 502

Query: 438 RLMLCRGFLPHYATSNELLVRLCK 461
             M   G +P   T   +++ L K
Sbjct: 503 SKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 171/336 (50%), Gaps = 12/336 (3%)

Query: 76  QCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHE 130
           Q   E +   SE   KG + +  TY+T++       K +    +L +M  +T     +  
Sbjct: 213 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
            I ++ +         + VL +  K       KP +   ST ++      +V  AQ+   
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLK----ACVKPDVITYSTLMDGYFLVYEVKKAQHVFN 328

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            +   + + P+   + ILI   CK   ++ A  + KEM +  M  P ++TYS+LIDGLCK
Sbjct: 329 -AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM-VPGIVTYSSLIDGLCK 386

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           +GR     +L +EM  + Q   + +TY+ LIDG C+ G +DRA  +   MK+ G  PN F
Sbjct: 387 SGRIPYVWDLIDEMHDRGQP-ANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTF 445

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            +T L++G CK G+L++A+EVF ++       +   Y  +I+  C+ G ++EAL +L +M
Sbjct: 446 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKM 505

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           ++ GC  D VTF II+  L ++ +    +G  +K+W
Sbjct: 506 EDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVW 541



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 141/279 (50%), Gaps = 14/279 (5%)

Query: 135  NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            N MKH+S        + + H++  +   +P L  ++  +N      Q+    NF   +  
Sbjct: 937  NPMKHYSTA------VSLSHRLE-LKGIQPDLFTLNILINCFCHMGQITF--NFSILAKI 987

Query: 195  HLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
              R   P+T  F  LI   C +G +  A     ++  +Q    N ++Y TLI+G+CK G 
Sbjct: 988  LKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLL-AQGFQLNQVSYGTLINGVCKIGD 1046

Query: 254  FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             R AI+L  ++  +    PD + YN +ID  C+   V +A  +   M   G + +V  Y 
Sbjct: 1047 TRAAIKLLRKIDGR-LTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYN 1105

Query: 314  TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR--VDEALELLKEMK 371
            TL+ GFC  GKL+EA  + ++M    + P+   Y  L++  C+ G+  +DE+L +L +M+
Sbjct: 1106 TLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKME 1165

Query: 372  ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            + GCKA+ VTF II+  L  + + ++   +L ++   G+
Sbjct: 1166 DNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 106/194 (54%)

Query: 270  ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            I PD  T N+LI+ FC  G++     I+  +   G +P+   +TTL+NG C +G++ +A 
Sbjct: 957  IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016

Query: 330  EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
               D++     + + + Y TLIN  C+ G    A++LL+++  R  K D+V +N I+  L
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076

Query: 390  CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            C+   + +A G+  ++   GI  +  +Y  ++   C  G+L++AI LL  M+ +   P+ 
Sbjct: 1077 CKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNV 1136

Query: 450  ATSNELLVRLCKAG 463
             T N L+  LCK G
Sbjct: 1137 RTYNILVDALCKEG 1150



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  +++ F K      A  +   ++   ++PD I    LINCFC  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ +RG   D VT N ++ GLC +G++++AL   +KL   G  LN+ SY  ++N  C+
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+   AI+LL+ +  R   P+    + ++  LCK  +  +A      +   G   +  +
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           ++ L+   C   KL  A  LL+E+V+K
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLK 263



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 36/272 (13%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+  F  M+      P  + +N ++D F +      A  +   ++  G  P++     L
Sbjct: 42  DAVSQFNRMLCMRHT-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL----------- 364
           +N FC  G++     V  ++      PDT+   TLI   C  G+V +AL           
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 365 ------------------------ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
                                   +LL+++  R  K ++V ++ I+  LC+   + EA G
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +  ++   GI  +  +Y  ++   C +G+L++AI LL  M+ +   P+  T N L+  LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           K G  ++A   L  +++   KP+  +++ L++
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMD 312



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 90/190 (47%), Gaps = 2/190 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F+ M      P  I +  +++ F +      A+ L   ++ +G + D++T NI
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C  G+I     +L K+   G   +  +   ++   C KG+++KA+     +L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF-KPESDSWALLVELICRGRKLLFA 503
           F  +  +   L+  +CK G    AAI L   ++    KP    ++ +++ +C+ + +  A
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTR-AAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 504 FELLDELVIK 513
           + L  E+ +K
Sbjct: 219 YGLFSEMTVK 228



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 77/152 (50%), Gaps = 2/152 (1%)

Query: 363  ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            A+ L   ++ +G + D+ T NI++   C  G+I     +L K+   G + +  ++  ++N
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 423  FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF-K 481
              C KG++ KA+     +L +GF  +  +   L+  +CK G    AAI L   ++    K
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR-AAIKLLRKIDGRLTK 1063

Query: 482  PESDSWALLVELICRGRKLLFAFELLDELVIK 513
            P+   +  +++ +C+ + +  A+ L  E+ +K
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVK 1095


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 235/496 (47%), Gaps = 63/496 (12%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM----- 121
           +L +   +P  AL +F     +        ++A +L  LAR ++F    A+L  +     
Sbjct: 76  ALRRVRLDPDAALHLFRLAPSRPSL----VSHAQLLHILARARRFHDARALLSSLPPHAE 131

Query: 122 --------TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
                    Y    F    F  L++  ++       L +F  +  +   +PSL++ +  L
Sbjct: 132 PLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGC-RPSLRSCNRLL 190

Query: 174 NLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           N L++S    +A   + Y    +  + P+     I+ K +C+ G +  A E ++EM+   
Sbjct: 191 NKLVQSGDPGMAA--MVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 233 MSY----------------------------------PNLITYSTLIDGLCKNGRFREAI 258
           +                                    PN++TY+ L+ G CK+GR  EA 
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + +EM     I+ D + Y ++I+G+C+ G++D A ++   M++ G + N+F Y T++NG
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK G+++E ++V  EM++  ++PD   Y TLI+ +CR G + +A E+ + M   G  A 
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWY----DGIYLNKASYRIVLNFSCQKGELEKAI 434
            +T+N +L G C    I++AL    +LW+     G+  N+ S   +L+   + G+ E+A+
Sbjct: 429 TLTYNTLLKGFCSLHAIDDAL----RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L +  L RG   +  T N ++  LCK G   +A   L  + E+   P+S ++  L +  
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 495 CRGRKLLFAFELLDEL 510
           C+  +L  A  L++++
Sbjct: 545 CKLGQLGTATHLMNKM 560



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 154/291 (52%), Gaps = 1/291 (0%)

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           S Q   L PN   + +L+K +CK G +E A  V+KEMK++     + + Y  +I+G C+ 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  +A  +  EM     I  +   YN +I+G C+ G+++  +K+++ M++ G  P+ ++
Sbjct: 338 GRMDDATRVRNEMRDAG-IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y TL++G+C+EG +++A E+   M    L   T+ Y TL+  FC    +D+AL L   M 
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           +RG   + ++ + +L GL + GK E+AL + ++    G+  N  ++  V+N  C+ G + 
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMA 516

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           +A ELL  M      P   T   L    CK G    A   +  +  +GF P
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 198/454 (43%), Gaps = 36/454 (7%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   +  +Y T++D   R         + R M           +  L+K F  CSLH
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGF--CSLH 443

Query: 147 --ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
             +  L ++  +  + R   P+  + ST L+ L ++ + + A N  K +     L  N  
Sbjct: 444 AIDDALRLWFLM--LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR-GLAKNVI 500

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            FN +I   CK G +  A E+L  MK+ +   P+ +TY TL DG CK G+   A  L  +
Sbjct: 501 TFNTVINGLCKIGRMAEAEELLDRMKELRCP-PDSLTYRTLFDGYCKLGQLGTATHLMNK 559

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M       P    +N  I G     +  +   I   M   G +PN+  Y  L+ G+CKEG
Sbjct: 560 M-EHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE----RGCKADI 379
            L EA  ++ EM N  + P+    + L++CF + G+VDEA  +L+++       GC    
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678

Query: 380 ----------------------VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
                                 V +N+I+ GLC+ G+I +A  + E L       +  +Y
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++     G +++A  L  +ML  G  P+  T N L+  LCK+G    A      L  
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G  P   ++  L++  C+  K   AF+L  ++V
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 150/316 (47%), Gaps = 44/316 (13%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +HL   P+  +FN  I  H          ++  EM    +S PNL+TY  LI G CK G 
Sbjct: 561 EHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLS-PNLVTYGALIAGWCKEGN 619

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN----NGC---- 305
             EA  L+ EMV+ + + P+    + L+  F + GKVD A  +++ + N     GC    
Sbjct: 620 LHEACNLYFEMVN-NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678

Query: 306 ----------------NPNVFN--YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
                           NP+  N  +  ++ G CK G++ +AK +F+ ++N    PD   Y
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           ++LI+    +G +DEA  L   M   G   +I+T+N ++ GLC+ GK+  A+ +  KL  
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798

Query: 408 DGIYLNKASYRIVLNFSCQKGE----------------LEKAIELLRLMLCRGFLPHYAT 451
            GI  N  +Y  +++  C++G+                +E+AI+LL  M+     P+Y T
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYIT 858

Query: 452 SNELLVRLCKAGMAED 467
              L+    K+G  E+
Sbjct: 859 YCTLIHGYIKSGNMEE 874



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 114/209 (54%), Gaps = 20/209 (9%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           + ++ +I GLCK+GR  +A  LFE + +K + LPD  TY+ LI G    G +D A  + +
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNK-RFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M + G  PN+  Y +L+ G CK GKL  A  +F+++++  + P+ I Y TLI+ +C+ G
Sbjct: 760 VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEG 819

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           +  EA +L ++M E                   EG +EEA+ +L+++  + +  N  +Y 
Sbjct: 820 KTTEAFKLKQKMVE-------------------EGYMEEAIKLLDQMIENNVDPNYITYC 860

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            +++   + G +E+  +L   M  RG LP
Sbjct: 861 TLIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 22/226 (9%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           ++  I  C    IE +++    + +   N H        ++N++I   CK G +  A  +
Sbjct: 667 NIDMIPGCSISTIEIDKISHVVDTIADGNPH----SANVMWNVIIFGLCKSGRIADAKSL 722

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
            + ++  +   P+  TYS+LI G   +G   EA  L + M+S   + P+ +TYN LI G 
Sbjct: 723 FESLRNKRF-LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG-LTPNIITYNSLIYGL 780

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK----------------LQEA 328
           C+ GK+ RA  +   +++ G +PN   Y TL++ +CKEGK                ++EA
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEA 840

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            ++ D+M    + P+ I Y TLI+ + ++G ++E  +L  EM  RG
Sbjct: 841 IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 886


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 221/438 (50%), Gaps = 26/438 (5%)

Query: 91  FNHNNATYAT--------ILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKH 139
           FNH    + T        IL  L   K++    ++ +QM     E   F   I +N   H
Sbjct: 46  FNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCH 105

Query: 140 FSNCSLHERVLEMFHKIHPITR--EKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHL 196
           F       +V+  F  +  I +   +P+   ++T +  L    +V  A  F  K   Q  
Sbjct: 106 FG------QVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           RL   +  + ILI   CK G   +A  +L+ +++  +  PN++ YS +ID LCK+    E
Sbjct: 160 RLSGIS--YGILINGVCKIGETRAAIRLLRRIERWSIR-PNVVIYSMIIDRLCKDTLVDE 216

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A +L+ EMV K  I PD +TY++L+ GFC  G+++RA  ++  M     NP+++ YT L+
Sbjct: 217 AYDLYTEMVGKG-ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +  CKEGK++EA+ V   M    +  D + Y+TL++ +C    V+ A  +   M + G  
Sbjct: 276 DALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVT 335

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+  ++I++ GLC+  +++EAL + E++    +  +  +Y  +++  C+ G +    +L
Sbjct: 336 PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELIC 495
              ML RG  P   T N L+  LCK G   D AIALF  + +   +P   ++ +L++ +C
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHL-DRAIALFNKMKDQAIRPNVYTFTILLDGLC 454

Query: 496 RGRKLLFAFELLDELVIK 513
           +  +L  A E   +L+ K
Sbjct: 455 KVGRLKNALEFFQDLLTK 472



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 174/307 (56%), Gaps = 5/307 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +P++   S  ++ L +   VD A +   Y+    + + P+   ++IL+   C  G L  A
Sbjct: 195 RPNVVIYSMIIDRLCKDTLVDEAYDL--YTEMVGKGISPDVVTYSILVSGFCIVGQLNRA 252

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++L EM    ++ P++ TY+ L+D LCK G+ +EA  +   MV K  +  D + Y+ L+
Sbjct: 253 IDLLNEMVLENIN-PDIYTYTILVDALCKEGKVKEAENVLAVMV-KACVNLDVVVYSTLM 310

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG+C   +V+ AK++   M   G  P+V  Y+ ++NG CK  ++ EA  +F+E+    + 
Sbjct: 311 DGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMV 370

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PDT+ YT+LI+C C++GR+    +L  EM +RG   D++T+N ++  LC+ G ++ A+ +
Sbjct: 371 PDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIAL 430

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K+    I  N  ++ I+L+  C+ G L+ A+E  + +L +G+  +  T   ++  LCK
Sbjct: 431 FNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490

Query: 462 AGMAEDA 468
            G+ ++A
Sbjct: 491 EGLLDEA 497



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 198/387 (51%), Gaps = 5/387 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           IS+G  I+ +    E + A+ +   + E+     N   Y+ I+D+L +    +    +  
Sbjct: 164 ISYGILINGVCKIGETRAAIRLLRRI-ERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYT 222

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           +M  +        +  L+  F       R +++ +++  +    P +   +  ++ L + 
Sbjct: 223 EMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM-VLENINPDIYTYTILVDALCKE 281

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            +V  A+N L    +   +  +  +++ L+  +C    + +A  V   M +  ++ P++ 
Sbjct: 282 GKVKEAENVLAVMVKAC-VNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVT-PDVH 339

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            YS +I+GLCK  R  EA+ LFEE+  K+ + PD +TY  LID  C+ G++     + + 
Sbjct: 340 CYSIMINGLCKIKRVDEALNLFEEIHQKNMV-PDTVTYTSLIDCLCKSGRISYVWDLFDE 398

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M + G  P+V  Y  L++  CK G L  A  +F++MK+  ++P+   +T L++  C+ GR
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGR 458

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +  ALE  +++  +G   ++ T+ +++ GLC+EG ++EAL +  ++  +G   +  ++ I
Sbjct: 459 LKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEI 518

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFL 446
           ++     K E +KA +L+R M+ RG L
Sbjct: 519 MIRAFFDKDENDKAEKLVREMIARGLL 545



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 120/265 (45%), Gaps = 3/265 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PNL  +S  +  L  N    +A+  F  M       P    +N ++       +   A  
Sbjct: 23  PNLCFHSHSLPPLTHNAD--DAVSQFNHMFHVHPT-PHTFHFNKILISLVNVKRYPTAIS 79

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M+ +   P+ F    ++N FC  G++  A     ++     +P+TI   TL+   C
Sbjct: 80  LYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLC 139

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
             G+V EAL    ++  +G +   +++ I++ G+C+ G+   A+ +L ++    I  N  
Sbjct: 140 LEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVV 199

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y ++++  C+   +++A +L   M+ +G  P   T + L+   C  G    A   L  +
Sbjct: 200 IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259

Query: 476 VEMGFKPESDSWALLVELICRGRKL 500
           V     P+  ++ +LV+ +C+  K+
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKV 284



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 35/223 (15%)

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            +A   F+ M +    P T  +  ++       R   A+ L K+M+    + D  T NII
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 386 LG-----------------------------------GLCREGKIEEALGMLEKLWYDGI 410
           +                                    GLC EGK++EAL   +K+   G 
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
            L+  SY I++N  C+ GE   AI LLR +      P+    + ++ RLCK  + ++A  
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               +V  G  P+  ++++LV   C   +L  A +LL+E+V++
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLE 262


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 239/487 (49%), Gaps = 14/487 (2%)

Query: 27  ISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKE-PQCALEIFNTV 85
           ++P + +  NT +  P    +   V  +  S        I ++   +E P  AL  F  V
Sbjct: 70  VAPYKDLIFNTIQEKPWAFCNQNWVSDKFNSVITDPQLLIRVLYSIREKPTIALRFFKCV 129

Query: 86  SEQKGFNHNNATYATILDKLARYKKFEAVDAVL-RQMTYETCKFHEGIFLNLMKHFSNCS 144
             Q GF  +   +  IL  L      ++   V+ R +++E      GI   L+  +    
Sbjct: 130 LTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEM----YGIVDVLIGGY---- 181

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           L+ + L +F K+    R  P +K  +  L +L + N +  A    +   ++  ++P    
Sbjct: 182 LNYQCLLVFEKMMR-NRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEY-GIRPTVTT 239

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++   CK G ++ A +++ +M++ +  YP+ +T++ LI+GL K G  ++A  L +EM
Sbjct: 240 YNTMLHSFCKGGEVQRALDLVPKMQE-RGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM 298

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +K  +     TYN LI G+C+ G +  A  + E M   G +P V ++ T+M GFCKEGK
Sbjct: 299 -AKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGK 357

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A++   +M    L PD I Y TLI  FCR G + EA  LL E++ R    +IVT+N 
Sbjct: 358 MSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNT 417

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLCR G +E AL + E +   GI+ +  +Y +++N +C+ G +  A E    ML  G
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P        +V   K G    A      ++  GF P+  ++ + V  +C+   L  A 
Sbjct: 478 LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAG 537

Query: 505 ELLDELV 511
           ELL +++
Sbjct: 538 ELLQKMI 544



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 2/303 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P     N ++   CK G +  A + L +M K  +  P++I+Y+TLI G C+ G   EA
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLM-PDIISYNTLIYGFCRLGNIGEA 396

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +E+  ++    + +TYN LIDG CR G ++ A K+ E M N G +P+V  YT L+N
Sbjct: 397 FILLDELRFRNLSF-NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G +  AKE FDEM +  L PD   YT  I    + G   +A +L +EM  +G   
Sbjct: 456 GACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPP 515

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D++T+N+ + GLC+ G +EEA  +L+K+  DG   +  +Y   ++   + G L +  E+ 
Sbjct: 516 DVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIF 575

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             ML RG  P   T   L+      G  + A      + E G  P   ++ +L+   C+ 
Sbjct: 576 YDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKV 635

Query: 498 RKL 500
           RK+
Sbjct: 636 RKM 638



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 153/295 (51%), Gaps = 35/295 (11%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N LI   C+ G LE+A + LKE   ++  +P+++TY+ L++G CK G    A E 
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALK-LKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEF 469

Query: 261 FEEMV----SKDQIL------------------------------PDALTYNVLIDGFCR 286
           F+EM+    + DQ                                PD +TYNV ++G C+
Sbjct: 470 FDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G ++ A ++++ M  +G  P+   YT+ M+   + G L+E +E+F +M +    P  + 
Sbjct: 530 LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVT 589

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           YT LI+     GR+D A+    EM+E+G   +++T+N+++ G C+  K+++A     ++ 
Sbjct: 590 YTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQ 649

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             GI+ NK +Y I++N +C  G+ ++A+ L   ML +   P   T   LL +L K
Sbjct: 650 EKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDK 704


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 228/455 (50%), Gaps = 24/455 (5%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL---RQMTYETCKFH 129
           ++   AL+ FN   E  G+ H   +Y ++L+ L R +        L    + +    K  
Sbjct: 90  RDTSKALQFFNWAQEM-GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLE 148

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
              F +LM++F+   L +  +++F   K H ++   PS+   ++ L +L++  + ++A+ 
Sbjct: 149 ARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVS---PSVVTFNSLLTILLKRGRTNMAKK 205

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
                     + P+T  FNILI+  C  G ++  F +  ++ +     P+++TY+TL+DG
Sbjct: 206 VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCE-PDVVTYNTLVDG 264

Query: 248 LCKNGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           LC+ G+   A  + + M  K   L P+ +TY  LI G+C   ++++A  + E M N G  
Sbjct: 265 LCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLK 324

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFD-EMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            N   Y TL+ G C+  K ++ K++ +    +    PDT  + TL++C C AG +D+AL+
Sbjct: 325 ANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALK 384

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK-------ASYR 418
           + + M E   + D  T++ ++  LC+ G  E+A  +L+KL    I L+        A+Y 
Sbjct: 385 VFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYN 444

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFL--PHYATSNELLVRLCKAGMAEDAAIALFGLV 476
            +  + C+ G+ +KA +  R ++ RG    P Y T   L++  CK G  E     L  ++
Sbjct: 445 PIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKT---LIMGHCKEGTFESGYELLVLML 501

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              F P+ +++  L+  +    K L A + L++++
Sbjct: 502 RKDFXPDFETYESLINGLLHMDKPLLALQSLEKML 536



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 177/391 (45%), Gaps = 54/391 (13%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +P +   +T ++ L  + +V +A N +K    + + L PN   +  LI+ +C +  +E A
Sbjct: 252 EPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKA 311

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR-------------------------- 255
             V +EM    +   N ITY+TLI GLC+  +F                           
Sbjct: 312 LAVFEEMVNQGLKANN-ITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLM 370

Query: 256 ----------EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME------- 298
                     +A+++FE M S+ +I PD+ TY+ L+   C+GG  ++A+ +++       
Sbjct: 371 HCHCHAGNLDDALKVFERM-SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE-MKNFLLKPDTIGYTTLINCFCRA 357
            +  +GC P V  Y  +    C+ GK ++A++ F + M+     P +  Y TLI   C+ 
Sbjct: 430 LLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPS--YKTLIMGHCKE 487

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G  +   ELL  M  +    D  T+  ++ GL    K   AL  LEK+       N +++
Sbjct: 488 GTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTF 547

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +L    ++G   ++  L++LML +    + + S   +  L  AGM + A    F LV 
Sbjct: 548 HSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKA----FQLVH 603

Query: 478 MGF-KPESDSWALLVELICRGRKLLFAFELL 507
           + + K  S     L+  +C  RK++   +LL
Sbjct: 604 LLYGKGYSVKMEELIRYLCHCRKVIQGSKLL 634



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 192/447 (42%), Gaps = 54/447 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLN 135
              IFN +S + G   +  TY T++D L R  K      V++ M  ++   +  +  +  
Sbjct: 239 GFRIFNDLS-RFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTT 297

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI----ESNQVDLAQNFLKY 191
           L++ +      E+ L +F ++         LKA +   N LI    E+ + +  ++ L+ 
Sbjct: 298 LIRGYCAKREIEKALAVFEEM-----VNQGLKANNITYNTLIKGLCEARKFEKIKDILEG 352

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           +       P+TC FN L+  HC  G L+ A +V + M + ++  P+  TYS L+  LC+ 
Sbjct: 353 TAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQ-PDSATYSALVRSLCQG 411

Query: 252 GRFREAIELFEEMVSKDQIL------PDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNG 304
           G + +A +L ++++ +  +L      P    YN +    C  GK  +A+K   + M+   
Sbjct: 412 GHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGT 471

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
            +P   +Y TL+ G CKEG  +   E+   M      PD   Y +LIN      +   AL
Sbjct: 472 QDPP--SYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLAL 529

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           + L++M     + +  TF+ IL  L  +G+  E+  +++ +    I  N +     +   
Sbjct: 530 QSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLL 589

Query: 425 CQKGELEKAIELLRLMLCRGF------LPHYATS-------------------------- 452
              G  +KA +L+ L+  +G+      L  Y                             
Sbjct: 590 FGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLC 649

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMG 479
           N ++ +LC+     +A    + LVEMG
Sbjct: 650 NTVIFQLCEINKLSEAFSLYYKLVEMG 676



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 159/388 (40%), Gaps = 62/388 (15%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR------QMTYET 125
           ++E + AL +F  +  Q G   NN TY T++  L   +KFE +  +L         + +T
Sbjct: 305 KREIEKALAVFEEMVNQ-GLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDT 363

Query: 126 CKFHEGIFLNLMKHFSNCSLH----ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           C F      N + H   C  H    +  L++F ++  + + +P     S  +  L +   
Sbjct: 364 CTF------NTLMH---CHCHAGNLDDALKVFERMSEL-KIQPDSATYSALVRSLCQGGH 413

Query: 182 VDLAQNFL-KYSNQHLRL-----KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
            + A++ L K   + + L     KP    +N + K+ C+ G  + A +  +++ +     
Sbjct: 414 YEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQD 473

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P   +Y TLI G CK G F    EL   M+ KD   PD  TY  LI+G     K   A +
Sbjct: 474 PP--SYKTLIMGHCKEGTFESGYELLVLMLRKD-FXPDFETYESLINGLLHMDKPLLALQ 530

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
            +E M  +   PN   + +++    ++G+  E+  +   M +  ++ +    T  +    
Sbjct: 531 SLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLF 590

Query: 356 RAGRVDEALELLKEMKERG--------------CK------------------ADIVTFN 383
            AG  D+A +L+  +  +G              C+                   D+   N
Sbjct: 591 GAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCN 650

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIY 411
            ++  LC   K+ EA  +  KL   G++
Sbjct: 651 TVIFQLCEINKLSEAFSLYYKLVEMGVH 678


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 190/361 (52%), Gaps = 14/361 (3%)

Query: 159 ITREKPSLKAISTCL---NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           + R  P   A++ C     L    +  D  Q F +  + H+   PN   FN ++   CKR
Sbjct: 145 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVF--PNLAAFNKVLHALCKR 202

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G +  A  +L ++ +  MS  NL TY+  I GLC+ GR  EA+ L + M  +   +PD +
Sbjct: 203 GDVLEAGLLLGKVIQRGMSI-NLFTYNIWIRGLCEAGRLPEAVRLVDGM--RAYAVPDVV 259

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE- 334
           TYN LI G C+      A   +  M N GC P+ F Y T+++G+CK   +QEA E+  + 
Sbjct: 260 TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDA 319

Query: 335 -MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
             K F+  PD + Y +LIN  C  G V+ ALEL  E + +G K DIV +N ++ GLC +G
Sbjct: 320 VFKGFV--PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 377

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            I  AL ++ ++  +G + +  +Y IV+N  C+ G +  A  ++   + +G+LP   T N
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437

Query: 454 ELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
            L+   CK  +  D+A+ L   + E G  P++ ++  ++  +C+  K+    E   E+++
Sbjct: 438 TLIDGYCKR-LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 496

Query: 513 K 513
           K
Sbjct: 497 K 497



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 190/382 (49%), Gaps = 39/382 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L A +  L+ L +   V  A   L    Q   +  N   +NI I+  C+ G L  A  
Sbjct: 187 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAGRLPEAVR 245

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++  M+    + P+++TY+TLI GLCK    +EA+     M+++   LPD  TYN +IDG
Sbjct: 246 LVDGMRA--YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG-CLPDDFTYNTIIDG 302

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+   V  A ++++     G  P+   Y +L+NG C EG ++ A E+F+E +   +KPD
Sbjct: 303 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPD 362

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG---------- 393
            + Y +L+   C  G +  AL+++ EM E GC  DI T+NI++ GLC+ G          
Sbjct: 363 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 422

Query: 394 -------------------------KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
                                    K++ AL ++E++W  GI  +  +Y  VLN  C+ G
Sbjct: 423 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 482

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           ++ +  E  + M+ +G  P+  T N L+   C++   E+A+  +  + + G  P++ S+ 
Sbjct: 483 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 542

Query: 489 LLVELICRGRKLLFAFELLDEL 510
            L+   CR   L  A+ L  +L
Sbjct: 543 TLIYGFCRNGDLEGAYLLFQKL 564



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 200/415 (48%), Gaps = 4/415 (0%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  L +    +     LR+M  + C   +  +  ++  +   S+ +   E+  K 
Sbjct: 260 TYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL-KD 318

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P      + +N L     V+ A      + Q   +KP+  ++N L+K  C +G
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA-QAKGIKPDIVVYNSLVKGLCLQG 377

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            +  A +V+ EM + +  +P++ TY+ +I+GLCK G   +A  +  + + K   LPD  T
Sbjct: 378 LILHALQVMNEMAE-EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY-LPDVFT 435

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           +N LIDG+C+  K+D A +++E M   G  P+   Y +++NG CK GK+ E  E F EM 
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
                P+ I Y  LI  FCR+ +++EA +++ +M + G   D V+FN ++ G CR G +E
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A  + +KL   G      ++  ++     K  +  A ++   ML +G      T   L+
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              CK    + A + L  +++ GF P   ++  ++  +    ++  A  ++  +V
Sbjct: 616 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 670



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 169/314 (53%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  LI   C  G +E A E+  E +   +  P+++ Y++L+ GLC  G    A++
Sbjct: 326 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK-PDIVVYNSLVKGLCLQGLILHALQ 384

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  EM +++   PD  TYN++I+G C+ G +  A  +M      G  P+VF + TL++G+
Sbjct: 385 VMNEM-AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 443

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  KL  A ++ + M  + + PDTI Y +++N  C+AG+V+E  E  +EM  +GC  + 
Sbjct: 444 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 503

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+NI++   CR  K+EEA  ++ K+  +G++ +  S+  ++   C+ G+LE A  L + 
Sbjct: 504 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 563

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +  +G+     T N L+           A      ++  G + +S ++ +L++  C+   
Sbjct: 564 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 623

Query: 500 LLFAFELLDELVIK 513
           +  A+  L E++ K
Sbjct: 624 VDRAYMHLVEMIKK 637



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 207/421 (49%), Gaps = 20/421 (4%)

Query: 71  CEKE-PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           C+K  PQ A+     +  Q G   ++ TY TI+D   +    +    +L+   ++     
Sbjct: 269 CKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 327

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST-----CL-NLLIESNQVD 183
           +  + +L+         ER LE+F++       KP +   ++     CL  L++ + QV 
Sbjct: 328 QVTYCSLINGLCAEGDVERALELFNEAQA-KGIKPDIVVYNSLVKGLCLQGLILHALQV- 385

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE-MKKSQMSYPNLITYS 242
              N +     H    P+   +NI+I   CK G +  A  V+ + + K  +  P++ T++
Sbjct: 386 --MNEMAEEGCH----PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL--PDVFTFN 437

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TLIDG CK  +   A++L E M     I PD +TYN +++G C+ GKV+   +  + M  
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYG-IAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 496

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            GC+PN   Y  L+  FC+  K++EA +V  +M    L PD + + TLI  FCR G ++ 
Sbjct: 497 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 556

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  L ++++E+G  A   TFN ++G    +  +  A  + +++   G   +  +YR++++
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 616

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
            SC+   +++A   L  M+ +GF+P  +T   ++  L        A   +  +V++G  P
Sbjct: 617 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676

Query: 483 E 483
           E
Sbjct: 677 E 677



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 153/315 (48%), Gaps = 9/315 (2%)

Query: 197 RLKPNTC--IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           RL P T   ++   I+ + + G L  A +  + M       P    Y+ ++D L      
Sbjct: 46  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACP-PAAPAYNAIMDALVDAAYH 104

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A +++  M++   + PD  T+ + +  FC   +   A +++  + + G       Y T
Sbjct: 105 DQAHKVYVRMLAAG-VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCT 159

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G    G   +A+++FD+M +  + P+   +  +++  C+ G V EA  LL ++ +RG
Sbjct: 160 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 219

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              ++ T+NI + GLC  G++ EA+ +++ +    +  +  +Y  ++   C+K   ++A+
Sbjct: 220 MSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAM 278

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
             LR M+ +G LP   T N ++   CK  M ++A   L   V  GF P+  ++  L+  +
Sbjct: 279 HYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGL 338

Query: 495 CRGRKLLFAFELLDE 509
           C    +  A EL +E
Sbjct: 339 CAEGDVERALELFNE 353



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 147/313 (46%), Gaps = 25/313 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV-----DAVLRQMTYETCKFHEGI 132
           AL++ N ++E+ G + +  TY  +++ L +            DA+++    +   F+  I
Sbjct: 382 ALQVMNEMAEE-GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440

Query: 133 --FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
             +   +K  S   L ER+ E  + I P T    S+      LN L ++ +V    N + 
Sbjct: 441 DGYCKRLKLDSALQLVERMWE--YGIAPDTITYNSV------LNGLCKAGKV----NEVN 488

Query: 191 YSNQHLRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            + Q + LK   PN   +NILI++ C+   +E A +V+ +M +  + +P+ ++++TLI G
Sbjct: 489 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL-HPDAVSFNTLIYG 547

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C+NG    A  LF+++  K      A T+N LI  F     +  A+KI + M + G   
Sbjct: 548 FCRNGDLEGAYLLFQKLEEKGYS-ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 606

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           + + Y  L++G CK   +  A     EM      P    +  +IN      RV +A+ ++
Sbjct: 607 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 666

Query: 368 KEMKERGCKADIV 380
             M + G   ++V
Sbjct: 667 HIMVKIGVVPEVV 679


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 235/496 (47%), Gaps = 63/496 (12%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM----- 121
           +L +   +P  AL +F     +        ++A +L  LAR ++F    A+L  +     
Sbjct: 76  ALRRVRLDPDAALHLFRLAPSRPSL----VSHAQLLHILARARRFHDARALLSSLPPHAE 131

Query: 122 --------TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
                    Y    F    F  L++  ++       L +F  +  +   +PSL++ +  L
Sbjct: 132 PLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGC-RPSLRSCNRLL 190

Query: 174 NLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           N L++S    +A   + Y    +  + P+     I+ K +C+ G +  A E ++EM+   
Sbjct: 191 NKLVQSGDPGMAA--MVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248

Query: 233 MSY----------------------------------PNLITYSTLIDGLCKNGRFREAI 258
           +                                    PN++TY+ L+ G CK+GR  EA 
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + +EM     I+ D + Y ++I+G+C+ G++D A ++   M++ G + N+F Y T++NG
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK G+++E ++V  EM++  ++PD   Y TLI+ +CR G + +A E+ + M   G  A 
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWY----DGIYLNKASYRIVLNFSCQKGELEKAI 434
            +T+N +L G C    I++AL    +LW+     G+  N+ S   +L+   + G+ E+A+
Sbjct: 429 TLTYNTLLKGFCSLHAIDDAL----RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L +  L RG   +  T N ++  LCK G   +A   L  + E+   P+S ++  L +  
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 495 CRGRKLLFAFELLDEL 510
           C+  +L  A  L++++
Sbjct: 545 CKLGQLGTATHLMNKM 560



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 154/291 (52%), Gaps = 1/291 (0%)

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           S Q   L PN   + +L+K +CK G +E A  V+KEMK++     + + Y  +I+G C+ 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  +A  +  EM     I  +   YN +I+G C+ G+++  +K+++ M++ G  P+ ++
Sbjct: 338 GRMDDATRVRNEMRDAG-IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y TL++G+C+EG +++A E+   M    L   T+ Y TL+  FC    +D+AL L   M 
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           +RG   + ++ + +L GL + GK E+AL + ++    G+  N  ++  V+N  C+ G + 
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMA 516

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           +A ELL  M      P   T   L    CK G    A   +  +  +GF P
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 28/346 (8%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +HL   P+  +FN  I  H          ++  EM    +S PNL+TY  LI G CK G 
Sbjct: 561 EHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLS-PNLVTYGALIAGWCKEGN 619

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN----NGC---- 305
             EA  L+ EMV+ + + P+    + L+  F + GKVD A  +++ + N     GC    
Sbjct: 620 LHEACNLYFEMVN-NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678

Query: 306 ----------------NPNVFN--YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
                           NP+  N  +  ++ G CK G++ +AK +F+ ++N    PD   Y
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           ++LI+    +G +DEA  L   M   G   +I+T+N ++ GLC+ GK+  A+ +  KL  
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            GI  N  +Y  +++  C++G+  +A +L + M+  G  P   T + L+  LC  G  E+
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEE 858

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A   L  ++E    P   ++  L+    +   +    +L DE+ I+
Sbjct: 859 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIR 904



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 127/209 (60%), Gaps = 1/209 (0%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           + ++ +I GLCK+GR  +A  LFE + +K + LPD  TY+ LI G    G +D A  + +
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNK-RFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M + G  PN+  Y +L+ G CK GKL  A  +F+++++  + P+ I Y TLI+ +C+ G
Sbjct: 760 VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEG 819

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           +  EA +L ++M E G +  ++T++I++ GLC +G +EEA+ +L+++  + +  N  +Y 
Sbjct: 820 KTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYC 879

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            +++   + G +E+  +L   M  RG LP
Sbjct: 880 TLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/488 (20%), Positives = 220/488 (45%), Gaps = 68/488 (13%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++KG + N  TY  ++    +  + E  + V+++M        + +   +M    N    
Sbjct: 280 QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM---INGYCQ 336

Query: 147 ERVLEMFHKIHPITREKP---SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
              ++   ++    R+     +L   +T +N L +  +++  Q  L+   + + ++P+  
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQ-EMEDVGMRPDKY 395

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSY---------------------------- 235
            +N LI  +C+ G++  AFE+ + M ++ ++                             
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 236 ------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
                 PN I+ STL+DGL K G+  +A+ L++E +++  +  + +T+N +I+G C+ G+
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG-LAKNVITFNTVINGLCKIGR 514

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +  A+++++ MK   C P+   Y TL +G+CK G+L  A  + ++M++    P    + +
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
            I     A +  +  ++  EM  RG   ++VT+  ++ G C+EG + EA  +  ++  +G
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS----------------- 452
           +  N      +++   ++G++++A  +L+ ++    +P  + S                 
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADG 694

Query: 453 ---------NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
                    N ++  LCK+G   DA      L    F P++ +++ L+        +  A
Sbjct: 695 NPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEA 754

Query: 504 FELLDELV 511
           F L D ++
Sbjct: 755 FSLRDVML 762


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/250 (38%), Positives = 152/250 (60%), Gaps = 2/250 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + K G L+  F +   M+ S +  P++ TYS LI+GLCK  R  EA
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQ-PDVYTYSVLINGLCKESRMDEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF EM+  + ++P+ +T+  LIDG C+ G++D A  I   M N G +P+V  Y TL+ 
Sbjct: 226 NGLFGEMLD-NGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A+ + DEM    LKPD I YTTLI+  C+ G ++ A EL + M +   + 
Sbjct: 285 GLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG+++KA ELL
Sbjct: 345 DDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELL 404

Query: 438 RLMLCRGFLP 447
           R M   G +P
Sbjct: 405 REMQRNGRVP 414



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 195/351 (55%), Gaps = 7/351 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLES 220
           ++  +   S  +   +ES  +  A    + + +H  R+  +TC  N+L +H  K    + 
Sbjct: 62  QRSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCR-NVL-EHLMKXKYFKL 119

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            +   KE+   +  YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N 
Sbjct: 120 VWGFYKEI--LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDA-ITKWGLRPSVVSFNT 176

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L++G+ + G +D   ++   M+ +G  P+V+ Y+ L+NG CKE ++ EA  +F EM +  
Sbjct: 177 LMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNG 236

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + +TTLI+  C+ GR+D A+++ ++M  +G   D+VT+N ++ GLC++G +++A 
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQAR 296

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L+++   G+  +K +Y  +++ SC++G+LE A EL   M+             L+  L
Sbjct: 297 YLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGL 356

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           C+ G A DA   L  ++ +G KP+ +++ +++   C+   +  A ELL E+
Sbjct: 357 CQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREM 407



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 159/304 (52%), Gaps = 10/304 (3%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           + +  + F  + E K +Q S  ++  +S LI    ++G  R+AIE F         +P  
Sbjct: 45  KDSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFD 102

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
              NVL        K    K +  F K     G   +++ +  LM+ FCKEG+++ A+ V
Sbjct: 103 TCRNVLEHLM----KXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSV 158

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD +  + L+P  + + TL+N + + G +DE   L   M+  G + D+ T+++++ GLC+
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCK 218

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           E +++EA G+  ++  +G+  N  ++  +++  C+ G L+ A+++ R ML +GF P   T
Sbjct: 219 ESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVT 278

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+  LCK G  + A   L  +   G KP+  ++  L++  C+   L  AFE L E +
Sbjct: 279 YNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFE-LRERM 337

Query: 512 IKES 515
           IKES
Sbjct: 338 IKES 341


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 175/315 (55%), Gaps = 2/315 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+   + +LI  HC+ G +E A  + +++  S     N+I YS L+  LCK G+  EA
Sbjct: 287 LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQL-NVILYSVLLSSLCKRGQVDEA 345

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L  EM   + + PD +TY++LI G C+ GKV +A ++ + M  N   PN F ++ ++ 
Sbjct: 346 LQLLYEM-EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILK 404

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C++G L +A+  FD +    L+PD   Y  +I+ + + G V+EA+ L K ++++    
Sbjct: 405 GLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            IVTFN ++ G C+  K+ EA  +LE +   G+  +  +Y  ++N  C++G + K  ELL
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELL 524

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +   P   T   ++  LCK    E++   L  +   G  P+  ++  +++  C+ 
Sbjct: 525 LEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKA 584

Query: 498 RKLLFAFELLDELVI 512
           + +  AFELLD+++I
Sbjct: 585 KDMRKAFELLDDMLI 599



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 176/329 (53%), Gaps = 35/329 (10%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N  ++++L+   CKRG ++ A ++L EM+ + +  P+L+TYS LI GLCK G+ ++AI+L
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQ-PDLVTYSILIHGLCKQGKVQQAIQL 383

Query: 261 FEEM----------------------------------VSKDQILPDALTYNVLIDGFCR 286
           ++EM                                  +    + PD   YN++IDG+ +
Sbjct: 384 YKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVK 443

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G V+ A ++ + +++    P++  + +L+ GFCK  K+ EA+ + + +K   L+P  + 
Sbjct: 444 LGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT 503

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           YTTL+N +C  G +++  ELL EM  +  +  +VT+ +++ GLC++ K+EE++ +LE + 
Sbjct: 504 YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMR 563

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+  ++ +Y  ++   C+  ++ KA ELL  ML     P  AT N L+  LC+ G  E
Sbjct: 564 AKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVE 623

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELIC 495
           DA   L  L +        ++  +++  C
Sbjct: 624 DADRVLVSLQDRNINLTKVAYTTMIKAHC 652



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 172/314 (54%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+  ++NI+I  + K G +E A  + K ++   ++ P+++T+++LI G CKN +  EA
Sbjct: 427 LRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAIT-PSIVTFNSLIYGFCKNRKVVEA 485

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L E  +    + P A+TY  L++ +C  G +++  +++  M      P V  YT ++ 
Sbjct: 486 RRLLES-IKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIK 544

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+ KL+E+ ++ ++M+   L PD I Y T+I CFC+A  + +A ELL +M     + 
Sbjct: 545 GLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEP 604

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              T+N+++ GLCR G +E+A  +L  L    I L K +Y  ++   C KG+ ++A+++ 
Sbjct: 605 TPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVF 664

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ +GF       + ++ RLCK  +  +A      ++  G  P+ + + +++    R 
Sbjct: 665 HQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRA 724

Query: 498 RKLLFAFELLDELV 511
             +   FELL  ++
Sbjct: 725 GHVHSVFELLAVMI 738



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 218/438 (49%), Gaps = 20/438 (4%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFL-------NL--- 136
           GF H+  +   +   LAR ++F+ +  VL QM  E       H+ +F+       NL   
Sbjct: 58  GFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPS 117

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           ++ +++   + R  ++   ++   ++     S +  S  ++ L   ++   A  FL+  N
Sbjct: 118 IQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLR-QN 176

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
                 P+   FN ++  +CK G  + A      M K  +  P+  +Y+ LI GL   G 
Sbjct: 177 DGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGI-LPDTYSYNILIHGLIVAGS 235

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNGCNPNVFNY 312
             EA+EL  +M  K  + PD +TY ++  GF   G +  A++I++ M  + G  P++  Y
Sbjct: 236 MEEALELTNDM-EKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTY 294

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L+ G C+ G ++EA  +  ++ +   + + I Y+ L++  C+ G+VDEAL+LL EM+ 
Sbjct: 295 TVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEA 354

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              + D+VT++I++ GLC++GK+++A+ + +++ ++ I+ N  ++  +L   C+KG L  
Sbjct: 355 NNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSD 414

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A      ++     P     N ++    K G  E+A      L +    P   ++  L+ 
Sbjct: 415 ARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIY 474

Query: 493 LICRGRKLLFAFELLDEL 510
             C+ RK++ A  LL+ +
Sbjct: 475 GFCKNRKVVEARRLLESI 492



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 183/355 (51%), Gaps = 10/355 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNF----LKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           PS+ + +T ++   +    D+A++F    LKY      + P+T  +NILI      G++E
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG-----ILPDTYSYNILIHGLIVAGSME 237

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A E+  +M+K  +  P+++TY  +  G    G    A E+ ++M++ + + PD +TY V
Sbjct: 238 EALELTNDMEKQGLQ-PDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTV 296

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI G C+ G ++ A ++   + ++G   NV  Y+ L++  CK G++ EA ++  EM+   
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L+PD + Y+ LI+  C+ G+V +A++L KEM       +    + IL GLC +G + +A 
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
              + L    +  +   Y I+++   + G++E+A+ L + +  +   P   T N L+   
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF 476

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           CK     +A   L  +   G +P + ++  L+   C    +    ELL E+ +K+
Sbjct: 477 CKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 146/283 (51%), Gaps = 3/283 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS+   ++ +    ++ +V  A+  L+    H  L+P+   +  L+  +C+ G +    E
Sbjct: 464 PSIVTFNSLIYGFCKNRKVVEARRLLESIKLH-GLEPSAVTYTTLMNAYCEEGNINKLHE 522

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM    +  P ++TY+ +I GLCK  +  E+++L E+M +K  + PD +TYN +I  
Sbjct: 523 LLLEMNLKDIE-PTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG-LAPDQITYNTIIQC 580

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+   + +A ++++ M  +   P    Y  L++G C+ G +++A  V   +++  +   
Sbjct: 581 FCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLT 640

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + YTT+I   C  G    A+++  +M E+G +  I  ++ ++  LC+   I EA     
Sbjct: 641 KVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFC 700

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            +  DG+  ++  + ++LN   + G +    ELL +M+  G L
Sbjct: 701 IMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLL 743



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 139/285 (48%), Gaps = 7/285 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   FN LI   CK   +  A  +L+ +K   +  P+ +TY+TL++  C+ G   + 
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLE-PSAVTYTTLMNAYCEEGNINKL 520

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL  EM  KD I P  +TY V+I G C+  K++ + +++E M+  G  P+   Y T++ 
Sbjct: 521 HELLLEMNLKD-IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQ 579

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            FCK   +++A E+ D+M    L+P    Y  LI+  CR G V++A  +L  +++R    
Sbjct: 580 CFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINL 639

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
             V +  ++   C +G  + A+ +  ++   G  ++   Y  V+N  C++  + +A    
Sbjct: 640 TKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYF 699

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAED-----AAIALFGLVE 477
            +ML  G  P       +L    +AG         A +  FGL+ 
Sbjct: 700 CIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLH 744



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 42/266 (15%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R+LE   K+H +   +PS    +T +N   E   ++     L   N    ++P    + +
Sbjct: 487 RLLESI-KLHGL---EPSAVTYTTLMNAYCEEGNINKLHELLLEMNLK-DIEPTVVTYTV 541

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +IK  CK+  LE + ++L++M+   ++ P+ ITY+T+I   CK    R+A EL ++M+  
Sbjct: 542 VIKGLCKQRKLEESVQLLEDMRAKGLA-PDQITYNTIIQCFCKAKDMRKAFELLDDMLIH 600

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + P   TYNVLIDG CR G V+ A +++  +++   N     YTT++   C +G  Q 
Sbjct: 601 N-LEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQR 659

Query: 328 AKEVFDEM--KNFLLK---------------------------------PDTIGYTTLIN 352
           A +VF +M  K F +                                  PD   +  ++N
Sbjct: 660 AVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLN 719

Query: 353 CFCRAGRVDEALELLKEMKERGCKAD 378
            F RAG V    ELL  M + G   D
Sbjct: 720 AFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 214/439 (48%), Gaps = 11/439 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E++ T+ E  G      TY T+LD   +  K +    +L +M    C  ++  +  L+
Sbjct: 218 AVEVYRTMGE-FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYSNQH 195
              S     E+   +  ++      K  LK  +   N LI    N+  LA+         
Sbjct: 277 NGLSKKGEFEQAKGLIGEML-----KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331

Query: 196 LR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           L+   P    +N  I   CK G +  A + L +M  + +  P++++Y+TLI G C+ G  
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNL-LPDVVSYNTLIYGYCRLGNL 390

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  LF+E+ S   + P  +TYN L+DG CR G+++ A+++   M N G  P++  YT 
Sbjct: 391 MKAFLLFDELRSI-YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK G L  A+E FDEM +  L+ D+  Y T I    + G    A  L +EM  +G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D++ +N+++ GLC+ G +EEA  +L+K+  DG+  +  +Y  +++   + G L K  
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           E+   ML +G  P   T   L+      G  E A I    + E G  P   ++  L+  +
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629

Query: 495 CRGRKLLFAFELLDELVIK 513
           C+ R++  A+    E+V K
Sbjct: 630 CKVRRMDQAYNFFAEMVEK 648



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 165/298 (55%), Gaps = 3/298 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T L+ L    ++++AQ  LK    +  + P+   + IL+   CK G+L  A E
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQ-LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
              EM    +   +   Y+T I G  K G    A  L EEM++K    PD + YNV++DG
Sbjct: 466 FFDEMLHEGLELDSY-AYATRIVGELKLGDTSRAFSLQEEMLAKG-FPPDLIIYNVVVDG 523

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G ++ A ++++ M ++G  P+   YT++++   + G+L++ +E+F EM +  L P 
Sbjct: 524 LCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPS 583

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + YT LI+     GR++ A     EM+E+G   +++T+N ++ GLC+  ++++A     
Sbjct: 584 VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFA 643

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           ++   GI+ NK SY I++N +C  G  ++A+ L + ML RG  P   T + LL +L K
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 199/409 (48%), Gaps = 4/409 (0%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   N+ TY  +++ L++  +FE    ++ +M     K     +  L+  + N  + 
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              L +  ++  +    P++   ++ +  L +  ++  A   L     +  L P+   +N
Sbjct: 321 AEALSLQEEM-VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN-NLLPDVVSYN 378

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +C+ G L  AF +  E++   + +P ++TY+TL+DGLC+ G    A +L  EM++
Sbjct: 379 TLIYGYCRLGNLMKAFLLFDELRSIYL-FPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            + I PD +TY +L++G C+ G +  A++  + M + G   + + Y T + G  K G   
Sbjct: 438 -EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A  + +EM      PD I Y  +++  C+ G ++EA ELL++M   G   D VT+  I+
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
                 G++ +   +  ++   G+  +  +Y ++++    KG LE+A      M  +G L
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           P+  T N L+  LCK    + A      +VE G  P   S+ +L+   C
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENC 665



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 159/314 (50%), Gaps = 13/314 (4%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH--FSNCSLHERVLEMF 153
            TY T+LD L R  + E    V +Q+  E    +EGI  +++ +    N S     L M 
Sbjct: 410 VTYNTLLDGLCRQGELE----VAQQLKVEM--INEGIAPDIVTYTILVNGSCKMGSLSMA 463

Query: 154 HKI-HPITREKPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKH 211
            +    +  E   L + +    ++ E    D ++ F L+         P+  I+N+++  
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 523

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CK G LE A E+L++M  S    P+ +TY+++I    +NGR R+  E+F EM+SK  + 
Sbjct: 524 LCKLGNLEEASELLQKMV-SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-LT 581

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P  +TY VLI G    G+++RA      M+  G  PNV  Y +L+NG CK  ++ +A   
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNF 641

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F EM    + P+   YT LIN  C  G   EAL L K+M +RG + D  T + +L  L +
Sbjct: 642 FAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701

Query: 392 EGKIEEALGMLEKL 405
           + K+ +A+  LE L
Sbjct: 702 DCKL-QAVRQLESL 714



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 126/233 (54%)

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           ++LI  + +   V++   + + M  +  +P+V N   ++     +  + +A EV+  M  
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
           F +KP  + Y TL++ +C+ G+V + L+LL EM+ RGC  + VT+N+++ GL ++G+ E+
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A G++ ++   G+ ++  +Y  ++     KG L +A+ L   M+ +G  P  AT N  + 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LCK G   DA   L  ++     P+  S+  L+   CR   L+ AF L DEL
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 1/268 (0%)

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI    K     + + +F++M+ K ++ PD    N ++        + +A ++   M   
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMI-KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P +  Y TL++ +CK GK+Q+  ++  EM+     P+ + Y  LIN   + G  ++A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             L+ EM + G K    T+N ++ G   +G + EAL + E++   G     A+Y   +  
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G +  A++ L  ML    LP   + N L+   C+ G    A +    L  +   P 
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             ++  L++ +CR  +L  A +L  E++
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMI 436



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 35/195 (17%)

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           + K+  +++   VFD+M    L PD      ++        + +A+E+ + M E G K  
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 233

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           IVT+N +L   C+ GK+++ L +L ++   G   N  +Y +++N   +KGE E+A  L+ 
Sbjct: 234 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 293

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            ML  G      T N L+      GM  +A                              
Sbjct: 294 EMLKTGLKVSAYTYNPLIYGYFNKGMLAEA------------------------------ 323

Query: 499 KLLFAFELLDELVIK 513
                  L +E+V+K
Sbjct: 324 -----LSLQEEMVLK 333


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 197/360 (54%), Gaps = 26/360 (7%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
           L+ L ++N   LA  + K+     R   P+   ++I+++  CK G L+ A E+L ++++S
Sbjct: 45  LDALAKANAGQLA--YEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRES 102

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +   N+ITYS +IDG CK  R  +A+E+F+ M +    +PD +T+N L+ G C G ++ 
Sbjct: 103 GVKL-NVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMS 161

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A  + E+M   GC PNV +Y+TL++G CK G+L EA  +++EM      PD + YT+ +
Sbjct: 162 EAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFV 221

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG-MLEKLWYDGI 410
              C+A RV EA +  ++M  +G KAD V F+ ++G LC++G  EEA   M+E L   G+
Sbjct: 222 TGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGM 281

Query: 411 YLNKAS-----------------YRIVLNFSCQKGELEKAIELL-RLMLCRGFL--PHYA 450
            L++A                  +  +++  C+   L   + L  R+   + F   P+  
Sbjct: 282 -LDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N ++  LCKA   ++A   +  +   G  P+  +++ LV+ +C+  KL  A +LL+E+
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 220/488 (45%), Gaps = 58/488 (11%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           + +F+ +  QKG+ H+  TY   LD LA+    +      +QM        +  +  +++
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
                   ++  E+  ++   +  K ++   S  ++   ++++VD A    K  +     
Sbjct: 82  GLCKAGELDKAKELLGQLRE-SGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGC 140

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   FN L+K  C    +  AF + + M K+    PN+I+YSTL+DGLCK GR  EA 
Sbjct: 141 VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE-PNVISYSTLLDGLCKAGRLDEAC 199

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L+EEMV K   +PD + Y   + G C+  +V  A      M   G   +   ++T++  
Sbjct: 200 RLWEEMVEK-SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 319 FCKEGKLQEAK-----------------EVFDEM-------------------------- 335
            CK+G  +EA+                 + F+EM                          
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 336 ------------KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
                       K F   P+   Y  +++  C+A ++DEA EL+ EM   G   D+VT++
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC+ GK++ A  +LE++  +G++ +  +   +LN   + G+++ A+  L  M  R
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T N LL  LCKAG  ++A   L  +V     P+  S+ +++  +CR  +   A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 504 FELLDELV 511
             +  E+V
Sbjct: 499 HAIFQEMV 506



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 212/444 (47%), Gaps = 31/444 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  +Y+T+LD L +  + +    +  +M  ++C      + + +      +   
Sbjct: 172 KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVA 231

Query: 148 RVLEMFHKIHPITR-EKPSLKAISTCLNLLIESNQVDLAQNFL----------------- 189
              +   K+  +T+  K    A ST + +L +    + AQN +                 
Sbjct: 232 EACDCCRKM--VTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289

Query: 190 --KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY--PNLITYSTLI 245
               S  H    P+  +FN LI   CK   L     + + MK  +  Y  PNL TY+ ++
Sbjct: 290 EEMISRNH---PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMV 346

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           D LCK  +  EA EL  EM +   + PD +TY+ L+DG C+ GK+DRA  ++E M   G 
Sbjct: 347 DNLCKAKQLDEAQELVNEMANYG-LSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV 405

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            P+ F   +++N   K GK+  A    + MK     PD + Y TL++  C+AGR+DEA+ 
Sbjct: 406 FPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAIT 465

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
            L +M    C  D+ ++ II+  LCR G+   A  + +++   G+  +   Y  +L+   
Sbjct: 466 FLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G  + A+ELL+  LC+   P +     ++  LCKAG AEDA   +  + + GF  ++ 
Sbjct: 526 RNGLEDLALELLKTSLCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAF 582

Query: 486 SWALLVELICRGRKLLFAFELLDE 509
           ++  +V  + +  K+  A +L+D+
Sbjct: 583 TYINVVRGLRKLGKVDKARQLVDD 606



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 1/246 (0%)

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G+    + LF+ +  +        TYN  +D   +      A +  + M+  G  P+ F 
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+ ++ G CK G+L +AKE+  +++   +K + I Y+ +I+  C+A RVD+ALE+ K M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 372 E-RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
              GC  D+VTFN +L GLC   ++ EA  + E +   G   N  SY  +L+  C+ G L
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           ++A  L   M+ +  +P        +  LCKA    +A      +V  G K ++ +++ +
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 491 VELICR 496
           + ++C+
Sbjct: 256 IGILCK 261



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 144/295 (48%), Gaps = 43/295 (14%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ N ++   G + +  TY+ ++D L +  K +    +L +M+       EG+F +  
Sbjct: 358 AQELVNEMANY-GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS------KEGVFPD-- 408

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F++ S+                           LN L ++ +VD A + L+ + +   
Sbjct: 409 -SFTDASI---------------------------LNALSKAGKVDYALSHLE-TMKARG 439

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +N L+   CK G ++ A   L +M  ++ + P++ +Y+ +I  LC++G+   A
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCT-PDVFSYTIIITALCRSGQAAGA 498

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F+EMV K  +LPD + Y+ L+DG  R G  D A   +E +K + C P+   +  +++
Sbjct: 499 HAIFQEMV-KRGVLPDTVLYHSLLDGLARNGLEDLA---LELLKTSLCKPDFVMHKMVVD 554

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           G CK GK ++A EV + M +     D   Y  ++    + G+VD+A +L+ +  E
Sbjct: 555 GLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASE 609


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 204/376 (54%), Gaps = 13/376 (3%)

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           +++  S C L  R   +F          P  ++ +  L+ L +  + DL++ F K     
Sbjct: 1   MLEEASECFLKMRKFRVF----------PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAA 50

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             +K +   +NI+I + CK G LE A  +  +MK++  + P+++TY++LIDG  K G   
Sbjct: 51  -GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFT-PDIVTYNSLIDGHGKLGLLD 108

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E I +FE+M   D   PD +TYN LI+ FC+  ++ +A + +  MK NG  PNV  Y+T 
Sbjct: 109 ECICIFEQMKDAD-CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 167

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++ FCKEG LQEA + F +M+   L P+   YT+LI+  C+AG + EAL+L++E+ + G 
Sbjct: 168 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI 227

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           K ++VT+  +L GLC EG+++EA  +   +   G+  N+ +Y  +++   +  E+E A +
Sbjct: 228 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKD 287

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +L+ M  +   P       +L  LC     E+A + +  + E G    +  +  L++   
Sbjct: 288 ILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYF 347

Query: 496 RGRKLLFAFELLDELV 511
           +  +   A  LL+E++
Sbjct: 348 KSGQATEALTLLEEML 363



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 25/337 (7%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N LI   CK   +  AFE L EMK + +  PN++TYST ID  CK G  +EAI+
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLK-PNVVTYSTFIDAFCKEGMLQEAIK 182

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F +M  +  + P+  TY  LID  C+ G +  A K++E +   G   NV  YT L++G 
Sbjct: 183 FFVDM-RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+EG+++EA+EVF  M N  + P+   YT L++ F +A  ++ A ++LKEMKE+  K D+
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           + +  IL GLC E ++EEA  ++ ++   GI  N   Y  +++   + G+  +A+ LL  
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361

Query: 440 ML----------C-------------RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           ML          C             +G +P       L+    K G  ++A      ++
Sbjct: 362 MLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMI 421

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           E+G + +  ++  L+  +    ++  A  LLDE++ K
Sbjct: 422 EIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 458



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 203/416 (48%), Gaps = 29/416 (6%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV 114
           KRS F ++   I  +  E + + A  +F  + E  GF  +  TY +++D   +    +  
Sbjct: 53  KRSVF-TYNIMIDYLCKEGDLEMARSLFTQMKEA-GFTPDIVTYNSLIDGHGKLGLLDEC 110

Query: 115 DAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
             +  QM    C      +  L+  F       +  E  H++      KP++   ST ++
Sbjct: 111 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKA-NGLKPNVVTYSTFID 169

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
              +   +  A  F     + + L PN   +  LI  +CK G L  A ++++E+ ++ + 
Sbjct: 170 AFCKEGMLQEAIKFF-VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 228

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
             N++TY+ L+DGLC+ GR +EA E+F  M++   + P+  TY  L+ GF +  +++ AK
Sbjct: 229 L-NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG-VAPNQETYTALVHGFIKAKEMEYAK 286

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            I++ MK     P++  Y T++ G C E +L+EAK +  E+K   +  + + YTTL++ +
Sbjct: 287 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 346

Query: 355 CRAGRVDEALELLKEMKE-----------------------RGCKADIVTFNIILGGLCR 391
            ++G+  EAL LL+EM +                       +G   D + +  ++ G  +
Sbjct: 347 FKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 406

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            G ++EAL + +++   G+ L+  +Y  ++      G+++KA  LL  M+ +G LP
Sbjct: 407 HGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLP 462



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 158/362 (43%), Gaps = 53/362 (14%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSE--QKGFNHNNATYATILDKLARY 108
           VD R+ +   +     SLI    +     E    V E  Q G   N  TY  +LD L   
Sbjct: 185 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 244

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
            + +  + V R M       + G+                               P+ + 
Sbjct: 245 GRMKEAEEVFRAM------LNAGV------------------------------APNQET 268

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +  ++  I++ +++ A++ LK   +   +KP+  ++  ++   C    LE A  ++ E+
Sbjct: 269 YTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLLLYGTILWGLCNESRLEEAKLLIGEI 327

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K+S ++  N + Y+TL+D   K+G+  EA+ L EEM+              L+DG C+  
Sbjct: 328 KESGIN-TNAVIYTTLMDAYFKSGQATEALTLLEEMLD-------------LVDGLCKNN 373

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
             + AKK+ + M + G  P+   YT L++G  K G LQEA  + D M    ++ D   YT
Sbjct: 374 CFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYT 433

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LI     +G+V +A  LL EM  +G   D V +  ++      GK++EAL +  ++   
Sbjct: 434 ALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKR 493

Query: 409 GI 410
           G+
Sbjct: 494 GM 495


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 210/421 (49%), Gaps = 4/421 (0%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T+ T++  L    K      ++ +M    C+     + +++            
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L++  K+      K  +   ST ++ L     +D A +  K       +K +   +N L+
Sbjct: 213 LDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLV 270

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
           +  CK G       +LK+M   ++  PN+IT++ L+D   K G+ +EA EL++EM+++  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITRG- 328

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ +TYN L+DG+C   ++  A  +++ M  N C+P++  +T+L+ G+C   ++ +  
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +VF  +    L  + + Y+ L+  FC++G++  A EL +EM   G   D++T+ I+L GL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  GK+E+AL + E L    + L    Y  ++   C+ G++E A  L   + C+G  P+ 
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T   ++  LCK G   +A I L  + E G  P   ++  L+    R   L  + +L++E
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568

Query: 510 L 510
           +
Sbjct: 569 M 569



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 166/302 (54%), Gaps = 2/302 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN+L+    K G L+ A E+ KEM    +S PN+ITY+TL+DG C   R  EA  
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANN 354

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + MV +++  PD +T+  LI G+C   +VD   K+   +   G   N   Y+ L+ GF
Sbjct: 355 MLDLMV-RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ GK++ A+E+F EM +  + PD + Y  L++  C  G++++ALE+ +++++      I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +  I+ G+C+ GK+E+A  +   L   G+  N  +Y ++++  C+KG L +A  LLR 
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G  P+  T N L+    + G    +A  +  +   GF  ++ S  ++++++    K
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593

Query: 500 LL 501
            L
Sbjct: 594 RL 595



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 179/353 (50%), Gaps = 5/353 (1%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PSL   S   + +  + Q +L  +F K    +  +  N    NI+I   C+     
Sbjct: 82  SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTC 140

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A+ VL ++ K  + Y P+  T++TLI GL   G+  EA+ L + MV ++   PD +TYN
Sbjct: 141 FAYSVLGKVMK--LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV-ENGCQPDVVTYN 197

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            +++G CR G    A  ++  M+      +VF Y+T+++  C++G +  A  +F EM+  
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            +K   + Y +L+   C+AG+ ++   LLK+M  R    +++TFN++L    +EGK++EA
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             + +++   GI  N  +Y  +++  C +  L +A  +L LM+     P   T   L+  
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            C     +D       + + G    + ++++LV+  C+  K+  A EL  E+V
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 1/258 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI LF+EM+ + + LP  + ++       R  + +      + ++ NG   N++    +
Sbjct: 71  DAIALFQEMI-RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N FC+  K   A  V  ++     +PDT  + TLI      G+V EA+ L+  M E GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D+VT+N I+ G+CR G    AL +L K+    +  +  +Y  +++  C+ G ++ AI 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L + M  +G      T N L+  LCKAG   D A+ L  +V     P   ++ +L+++  
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 496 RGRKLLFAFELLDELVIK 513
           +  KL  A EL  E++ +
Sbjct: 310 KEGKLQEANELYKEMITR 327


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 175/315 (55%), Gaps = 2/315 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN  I+  LI   CK+G +E A ++  EM K  +   N  TY+ LI+GL KNG  ++  E
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL-VANERTYTVLINGLFKNGVKKQGFE 254

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           ++E+M  +D + P+  TYN +++  C+ G+   A ++ + M+  G + N+  Y TL+ G 
Sbjct: 255 MYEKM-QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+E KL EA +V D+MK+  + P+ I Y TLI+ FC  G++ +AL L +++K RG    +
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+NI++ G CR+G    A  M++++   GI  +K +Y I+++   +   +EKAI+L   
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G +P   T + L+   C  G   +A+     +VE   +P    +  ++   C+   
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493

Query: 500 LLFAFELLDELVIKE 514
              A +LL E+  KE
Sbjct: 494 SYRALKLLKEMEEKE 508



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 197/348 (56%), Gaps = 3/348 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T ++   +  +++ A++   +    L L  N   + +LI    K G  +  FE
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLF-FEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + ++M++  + +PNL TY+ +++ LCK+GR ++A ++F+EM  +  +  + +TYN LI G
Sbjct: 255 MYEKMQEDGV-FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG-VSCNIVTYNTLIGG 312

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            CR  K++ A K+++ MK++G NPN+  Y TL++GFC  GKL +A  +  ++K+  L P 
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  L++ FCR G    A +++KEM+ERG K   VT+ I++    R   +E+A+ +  
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G+  +  +Y ++++  C KG++ +A  L + M+ +   P+    N +++  CK G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            +  A   L  + E    P   S+  ++E++C+ RK   A  L+++++
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 169/291 (58%), Gaps = 2/291 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N ++   CK G  + AF+V  EM++  +S  N++TY+TLI GLC+  +  EA +
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS-CNIVTYNTLIGGLCREMKLNEANK 324

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + ++M S D I P+ +TYN LIDGFC  GK+ +A  +   +K+ G +P++  Y  L++GF
Sbjct: 325 VVDQMKS-DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C++G    A ++  EM+   +KP  + YT LI+ F R+  +++A++L   M+E G   D+
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+++++ G C +G++ EA  + + +       N+  Y  ++   C++G   +A++LL+ 
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           M  +   P+ A+   ++  LCK   +++A   +  +++ G  P +   +L+
Sbjct: 504 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 179/374 (47%), Gaps = 40/374 (10%)

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +Q   + + L Y  +    K    ++ ++I  + +  +L  +     EM  +    P   
Sbjct: 72  SQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGF-VPGSN 130

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            ++ L+  +  +  F +    F E  +K +++ D  ++ +LI G C  G+++++  ++  
Sbjct: 131 CFNYLLTFVVGSSSFNQWWSFFNE--NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIE 188

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC------ 353
           +   G +PNV  YTTL++G CK+G++++AK++F EM    L  +   YT LIN       
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248

Query: 354 -----------------------------FCRAGRVDEALELLKEMKERGCKADIVTFNI 384
                                         C+ GR  +A ++  EM+ERG   +IVT+N 
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++GGLCRE K+ EA  +++++  DGI  N  +Y  +++  C  G+L KA+ L R +  RG
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N L+   C+ G    AA  +  + E G KP   ++ +L++   R   +  A 
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428

Query: 505 ELLDELVIKESGTI 518
           +L   L ++E G +
Sbjct: 429 QL--RLSMEELGLV 440


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 191/412 (46%), Gaps = 16/412 (3%)

Query: 92  NH--NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           NH  +  TY  ++  L R    ++   V   M          ++ +L+K F         
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 150 LEM-----FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            +      F  I  IT      K        L++S  V  A   LK         P+   
Sbjct: 354 WKFWDSTGFSGIRQITTYNIMTKG-------LLDSGMVSEATELLKQLENDASCSPDKVT 406

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F  LI   C+ G    AFE+L++ + S     ++ +YS++I+  CK+GR  +A E+++ M
Sbjct: 407 FGTLIHGLCENGYANRAFEILEDARNSGEEL-DVFSYSSMINRFCKDGRTHDANEVYKNM 465

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V KD   P++  YN LI+GFCR  K++ A KI   M +NGC P +  Y TL++G CK  K
Sbjct: 466 V-KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEK 524

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            QEA  +  EM     KPD   Y +LI   CR  +VD AL +  E+ + G + D++  NI
Sbjct: 525 YQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC  GK++EA  +  ++       N  +Y  +++   + G ++KA  L   +L  G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             P   T N  +  LC      +  + L  ++  G  P   +W++LV  + +
Sbjct: 645 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 213/437 (48%), Gaps = 10/437 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM---TYETCKFHEGIFL 134
           A++++  +    G + N ATY  +LD L +  +F+    V  +M    ++      GI +
Sbjct: 247 AMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILI 306

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           + +    +     RV     K   +      +   ++ +    E  +   A  F  + + 
Sbjct: 307 HGLCRSGDVDSAARVYSDMVKAGLVL----DVSVYNSLIKGFCEVGRTGEAWKF--WDST 360

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
                     +NI+ K     G +  A E+LK+++      P+ +T+ TLI GLC+NG  
Sbjct: 361 GFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYA 420

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A E+ E+  +  + L D  +Y+ +I+ FC+ G+   A ++ + M  +GC PN   Y  
Sbjct: 421 NRAFEILEDARNSGEEL-DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNA 479

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NGFC+  K+ +A +++ EM +    P  I Y TLI+  C+A +  EA  L KEM ERG
Sbjct: 480 LINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERG 539

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            K DI T+  ++ GLCR+ K++ AL + +++   G+ ++   + I+++  C  G++++A 
Sbjct: 540 FKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAF 599

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +   M  +   P+  T N L+    + G  + AA     +++ G KP+  ++   ++ +
Sbjct: 600 CIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGL 659

Query: 495 CRGRKLLFAFELLDELV 511
           C   +      LL+E++
Sbjct: 660 CSCNRTPEGVLLLNEVL 676



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/556 (23%), Positives = 223/556 (40%), Gaps = 111/556 (19%)

Query: 66  ISLIKCEKEPQCALEIFNT-VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTY- 123
           + LIK E++P  AL      VS +  F         +L +LA          +       
Sbjct: 17  LELIKSERDPANALSHLELLVSTRPAFPPPQPLIFHLLRRLATSSPSHLPRLLGLLPRMR 76

Query: 124 ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
              +F E   L ++  FS   + +  L  F  +  +    P +++ +T L+  + + +  
Sbjct: 77  HRPRFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYS 136

Query: 184 LAQNF---LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
            A  F   L +     R+ PN   +NI+++  C RG ++ A  +   +++  ++ P+ +T
Sbjct: 137 DADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVA-PDRVT 195

Query: 241 YSTLIDGLCKN-----------------------------------GRFREAIELFEEMV 265
           YSTL+ GL K+                                   G F +A++++E++V
Sbjct: 196 YSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLV 255

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
                 P+  TY V++DG C+ G+   A ++   M  N    +   Y  L++G C+ G +
Sbjct: 256 RDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDV 315

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR-------------------------- 359
             A  V+ +M    L  D   Y +LI  FC  GR                          
Sbjct: 316 DSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMT 375

Query: 360 --------VDEALELLKEMK-ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
                   V EA ELLK+++ +  C  D VTF  ++ GLC  G    A  +LE     G 
Sbjct: 376 KGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGE 435

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLML------------------CR--------- 443
            L+  SY  ++N  C+ G    A E+ + M+                  CR         
Sbjct: 436 ELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIK 495

Query: 444 --------GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
                   G  P   T N L+  LCKA   ++A+     ++E GFKP+  ++A L+  +C
Sbjct: 496 IYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLC 555

Query: 496 RGRKLLFAFELLDELV 511
           R +K+  A  + DE++
Sbjct: 556 RDKKVDVALRIWDEIL 571



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 127/233 (54%), Gaps = 2/233 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN+ ++N LI   C+   +  A ++  EM  S    P +ITY+TLIDGLCK  +++EA 
Sbjct: 471 KPNSHVYNALINGFCRVSKINDAIKIYIEMT-SNGCCPTIITYNTLIDGLCKAEKYQEAS 529

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L +EM+ +    PD  TY  LI G CR  KVD A +I + + + G   +V  +  L++G
Sbjct: 530 SLTKEMLER-GFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C  GK+ EA  ++ EMK     P+ + Y TL++ F   G +D+A  L   + + G K D
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPD 648

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           IVT+N  + GLC   +  E + +L ++   GI     ++ I++    + G ++
Sbjct: 649 IVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 191/377 (50%), Gaps = 23/377 (6%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI--HPITREKPSLK 167
           KFE    V+R+M  +        +  ++ +  N S  E+  ++F ++  + IT   P + 
Sbjct: 102 KFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIT---PDVY 158

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
             +T L+   +   ++ A+N+     Q     PN   +  LI  + K   L  A E+  E
Sbjct: 159 TYTTLLDRFCKVGLIEQARNWFDEMQQD-GCAPNVVTYTALIHAYLKTRKLSRANEIF-E 216

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA------------- 274
           M  S    PN++TY+ LIDG CK G   +A +++  M +    +PD              
Sbjct: 217 MMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276

Query: 275 ---LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
              +TY  L+DG C+  KV  A+ ++E M   GC PN   Y  L++GFCK GKL EA+EV
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F +M      P+   Y++LI+   +  R+D AL++L +M E  C  ++V +  ++ GLC+
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            GK +EA  ++  +   G Y N  +Y  +++   + G +++ +ELL+LM  +G  P++ T
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456

Query: 452 SNELLVRLCKAGMAEDA 468
              L+   C AG+ +DA
Sbjct: 457 YRVLINHCCAAGLLDDA 473



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 219/449 (48%), Gaps = 27/449 (6%)

Query: 82  FNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           +N + E   KGF  +++TY+ ++  L    K E    + ++M           +  L+  
Sbjct: 107 YNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDR 166

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY--SNQHLR 197
           F    L E+    F ++       P++   +  ++  +++ ++  A    +   SN  + 
Sbjct: 167 FCKVGLIEQARNWFDEMQQ-DGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCV- 224

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK----------------SQMSYPNLITY 241
             PN   +  LI  HCK G  E A ++   MK                 S++  PN++TY
Sbjct: 225 --PNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTY 282

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
             L+DGLCK  + +EA +L E M S +   P+ + Y+ LIDGFC+ GK+D A+++   M 
Sbjct: 283 GALVDGLCKAHKVKEARDLLETM-SLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
            +GC+PNV+ Y++L++   K+ +L  A +V  +M      P+ + YT +++  C+ G+ D
Sbjct: 342 GHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTD 401

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           EA  L+  M+E+GC  ++VT+  ++ G  + G+++  L +L+ +   G   N  +YR+++
Sbjct: 402 EAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N  C  G L+ A +LL  M    +  H     +++       +A    +A   L E G  
Sbjct: 462 NHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLA--ELSEDGSV 519

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
           P    + LL++   +  +L  A EL +EL
Sbjct: 520 PILPVYKLLIDNFIKAGRLEMALELHEEL 548



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 176/331 (53%), Gaps = 19/331 (5%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P++  ++ +I + C    +E AF++ +EMK++ ++ P++ TY+TL+D  CK G   +A  
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIT-PDVYTYTTLLDRFCKVGLIEQARN 178

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F+EM  +D   P+ +TY  LI  + +  K+ RA +I E M +NGC PN+  YT L++G 
Sbjct: 179 WFDEM-QQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237

Query: 320 CKEGKLQEAKEVFDEMKNF-----------------LLKPDTIGYTTLINCFCRAGRVDE 362
           CK G+ ++A +++  MKN                  L +P+ + Y  L++  C+A +V E
Sbjct: 238 CKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKE 297

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A +LL+ M   GC+ + + ++ ++ G C+ GK++EA  +  K+   G   N  +Y  +++
Sbjct: 298 ARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
              +   L+ A+++L  ML     P+     E++  LCK G  ++A   +  + E G  P
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIK 513
              ++  +++   +  ++    ELL  +  K
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSK 448



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 170/362 (46%), Gaps = 42/362 (11%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           ++I+  + + +    N  TY  ++D L +  K +    +L  M+ E C+ ++ I+  L+ 
Sbjct: 263 VDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALID 322

Query: 139 HFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
            F      +   E+F K+  H  +   P++   S+ ++ L +  ++DLA   L    ++ 
Sbjct: 323 GFCKVGKLDEAQEVFTKMLGHGCS---PNVYTYSSLIDKLFKDKRLDLALKVLTKMLEN- 378

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
              PN  I+  ++   CK G  + A+ ++  M++ +  YPN++TY+ +IDG  K GR   
Sbjct: 379 SCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE-KGCYPNVVTYTAMIDGFGKAGRVDR 437

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-------------- 302
            +EL + M SK    P+ +TY VLI+  C  G +D A K++E MK               
Sbjct: 438 CLELLQLMTSKG-CAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVI 496

Query: 303 -------------------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
                              +G  P +  Y  L++ F K G+L+ A E+ +E+ +F     
Sbjct: 497 EGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ 556

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y +LI     A +VD+A +L  +M  RG   ++     ++ GL R GK EEAL + +
Sbjct: 557 NT-YVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSD 615

Query: 404 KL 405
            +
Sbjct: 616 SI 617



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 25/335 (7%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF--REA 257
           P+  IFN L+  +C+ G    A+++LK+M       P  + Y+ LI G+C        E 
Sbjct: 9   PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQ-PGYVVYNILIGGICSTEDLPSMEV 67

Query: 258 IEL----FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           I L    + EM+    +L      N      C  GK ++A  ++  M + G  P+   Y+
Sbjct: 68  IGLAERAYNEMLEMGVVLNKVNVCN-FTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYS 126

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++   C   K+++A ++F EMK   + PD   YTTL++ FC+ G +++A     EM++ 
Sbjct: 127 KVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQD 186

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  ++VT+  ++    +  K+  A  + E +  +G   N  +Y  +++  C+ GE EKA
Sbjct: 187 GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKA 246

Query: 434 IEL-----------------LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
            ++                  R++      P+  T   L+  LCKA   ++A   L  + 
Sbjct: 247 CQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMS 306

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             G +P    +  L++  C+  KL  A E+  +++
Sbjct: 307 LEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 147/312 (47%), Gaps = 30/312 (9%)

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M  ++  YP+ + +++L+   C++G +  A +L ++MV      P  + YN+LI G C  
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGY-QPGYVVYNILIGGICST 59

Query: 288 ---------GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
                    G  +RA   M  M       NV N+T  +   C  GK ++A  V  EM + 
Sbjct: 60  EDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCL---CCIGKFEKAYNVIREMMSK 116

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              PD+  Y+ +I   C A +V++A +L +EMK  G   D+ T+  +L   C+ G IE+A
Sbjct: 117 GFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQA 176

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
               +++  DG   N  +Y  +++   +  +L +A E+  +ML  G +P+  T   L+  
Sbjct: 177 RNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236

Query: 459 LCKAGMAEDA----------------AIALFGLVEMGFK-PESDSWALLVELICRGRKLL 501
            CKAG  E A                    F +V+   K P   ++  LV+ +C+  K+ 
Sbjct: 237 HCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVK 296

Query: 502 FAFELLDELVIK 513
            A +LL+ + ++
Sbjct: 297 EARDLLETMSLE 308


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 172/315 (54%), Gaps = 2/315 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + ++PN   +N LI   C+RG +  A  VL +M   +   P+++TY+ L++  CK   +R
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDML-CRGCAPDVVTYNILLEATCKGRGYR 59

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+EL + ++  +   P+ +TYNVL+DG C  G VD A +++  + ++GC P+  NY T+
Sbjct: 60  QAMELID-LMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 118

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   +  +A E+  EM      P+   +  +I   CR G + +A++LL++M + GC
Sbjct: 119 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 178

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
            A+IVT+N I+ GLC +  ++ A+G+L K+   G   +  +Y  +L   C       A E
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+  M   G LP   T N L+  LC+ G+  DA      + + G  P S +++ ++  + 
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 298

Query: 496 RGRKLLFAFELLDEL 510
           +  KL  A EL +E+
Sbjct: 299 KATKLDQALELFNEM 313



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 176/334 (52%), Gaps = 4/334 (1%)

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
            VD A   L+    H   KP+T  +N ++K  C       A E++ EM +     PN  T
Sbjct: 92  DVDDALELLRNLPSH-GCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP-PNEAT 149

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           ++ +I  LC+ G  ++AI+L E+M SK     + +TYN +I+G C    VD A  ++  M
Sbjct: 150 FNVVIYSLCRKGLLQQAIQLLEKM-SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 208

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           K+ GC P++  Y TL+ G C   +  +A+E+ D M      PD + + TLI   C+ G +
Sbjct: 209 KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 268

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            +A+E+ K+M ++GC  + +T++ I+ GL +  K+++AL +  ++ + G   +K  Y+++
Sbjct: 269 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLL 327

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
                    +E+AI+ +R +   G  PH    N +L+ LC+ G  E A   +  +V  G 
Sbjct: 328 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 387

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            P+  ++ +L+E +     L  A ELL +L  ++
Sbjct: 388 MPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD 421



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 169/313 (53%), Gaps = 5/313 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N+L+   C  G ++ A E+L+ +  S    P+ + Y+T++ GLC   R+ +A E
Sbjct: 75  PNNVTYNVLMDGMCGEGDVDDALELLRNLP-SHGCKPSTVNYNTVLKGLCSAERWGDADE 133

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM+ ++   P+  T+NV+I   CR G + +A +++E M  +GC  N+  Y  ++NG 
Sbjct: 134 LVTEML-RENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 192

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C++  +  A  +  +MK++  KPD + Y TL+   C A R  +A EL+  M + GC  D 
Sbjct: 193 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDN 252

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFN ++G LC++G + +A+ + +++   G   N  +Y  +++   +  +L++A+EL   
Sbjct: 253 VTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE 312

Query: 440 MLCRGFLPHYATSNELLVR-LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           M  +GF P      +LL   L      E+A   +  L + G  P +  +  ++  +CR  
Sbjct: 313 MGHKGFNPDKIY--QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNG 370

Query: 499 KLLFAFELLDELV 511
           K  FA +++  +V
Sbjct: 371 KTEFAIDIMAYMV 383



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 189/384 (49%), Gaps = 14/384 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+ + +  + G   NN TY  ++D +      +    +LR +    CK     +  ++
Sbjct: 61  AMELIDLMRAE-GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 119

Query: 138 KHFSNC----SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           K   +        E V EM  +  P      ++   S C   L++      A   L+  +
Sbjct: 120 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ-----AIQLLEKMS 174

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +H     N   +N +I   C++  ++ A  +L +MK S    P+++TY+TL+ GLC   R
Sbjct: 175 KH-GCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK-SYGCKPDIVTYNTLLKGLCSAAR 232

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           + +A EL + M +++  LPD +T+N LI   C+ G +  A ++ + M + GC PN   Y+
Sbjct: 233 WVDAEELMDNM-TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 291

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T+++G  K  KL +A E+F+EM +    PD I Y  L  C      ++EA++ ++++++ 
Sbjct: 292 TIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDS 350

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G     V +N IL GLCR GK E A+ ++  +   G   +  +Y I++     +G L +A
Sbjct: 351 GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 410

Query: 434 IELLRLMLCRGFLPHYATSNELLV 457
            ELL  +  R  L +    +E L+
Sbjct: 411 RELLIKLCSRDVLVNSLIKSEALL 434



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 69/131 (52%)

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N ++  LC  G++ +AL +L+ +   G   +  +Y I+L  +C+     +A+EL+ LM
Sbjct: 9   TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G  P+  T N L+  +C  G  +DA   L  L   G KP + ++  +++ +C   + 
Sbjct: 69  RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 128

Query: 501 LFAFELLDELV 511
             A EL+ E++
Sbjct: 129 GDADELVTEML 139


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 232/504 (46%), Gaps = 52/504 (10%)

Query: 50  CVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKG-FNH--------NNATYAT 100
           C+    R R+  H        C K+    L  FN + +    FNH        +   + T
Sbjct: 30  CIATTTRLRYAFHKFLRFFSHCPKQNAKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNT 89

Query: 101 ILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           I+  + + K      ++L+QM ++      F   I++N   H         VL +  K  
Sbjct: 90  IIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLK-- 147

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
                +P+   ++T +  L  + +V  A +F         L    C +  LI   CK G 
Sbjct: 148 --RGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVC-YGTLINGLCKIGR 204

Query: 218 LESAFEVLKEMK-------------------------KSQMSY---------PNLITYST 243
              AF++L+EM+                         K++  Y         P+++TY++
Sbjct: 205 SIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTS 264

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI G C+ G++ E  +L  EMV+K+ I P+  T+NVLID FCR GK+  A+ +   M   
Sbjct: 265 LIRGFCRTGQWGEVKQLMCEMVNKN-INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKR 323

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P++  + TL++G C  G + EA+++FD +    + PD   YT LI  +C+  R+DEA
Sbjct: 324 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 383

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           + L  EM+ +    DIV ++ ++ GLC+ G+I  A  +   +  DG   N  +Y I+++ 
Sbjct: 384 VSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDA 443

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+  +++  IEL +LM  +G  P   T N L+   CK+    +A   L  +      P+
Sbjct: 444 FCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPD 503

Query: 484 SDSWALLVELICRGRKLLFAFELL 507
           S ++  L + +C+  ++  A+EL 
Sbjct: 504 SITYNSLFDGLCKSGRISDAWELF 527



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 196/391 (50%), Gaps = 9/391 (2%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA--VLRQMTYETCKFHEG 131
           E Q A++  + V+ Q G   +   Y T+++ L +  +  ++DA  +L++M  +  K +  
Sbjct: 169 EVQKAMDFHDNVAAQ-GMLLDEVCYGTLINGLCKIGR--SIDAFQLLQEMEGQVVKPNIV 225

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           I+  ++  F    L  +  +++ KI  +  +   L   S            ++ Q   + 
Sbjct: 226 IYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEM 285

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            N+++   PN   FN+LI   C++G +  A  +   M K     P+++T++TLI G C +
Sbjct: 286 VNKNI--NPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ-PDIVTFNTLISGHCLH 342

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G   EA +LF+ +  +  ILPD  +Y +LI G+C+  ++D A  +   M+      ++  
Sbjct: 343 GNVLEARKLFDTVFERG-ILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVL 401

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y++L++G CK G++  A E+F  + N    P+ I Y  LI+ FC+   +D  +EL K M 
Sbjct: 402 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC 461

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
            +G    ++T+NI++ G C+  +I EA+ +L  +    +  +  +Y  + +  C+ G + 
Sbjct: 462 GKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRIS 521

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            A EL ++M   G     AT N LL   CKA
Sbjct: 522 DAWELFKVMHVGGPPVDVATYNVLLDAFCKA 552



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 200/391 (51%), Gaps = 19/391 (4%)

Query: 133 FLNLMKHFSNCS-LHERVLEMFHKI--------HPITREK-PSLKAISTCLNLLIESNQV 182
           F   ++ FS+C   + ++L  F+ I        H I  +  PS+   +T +  +++    
Sbjct: 41  FHKFLRFFSHCPKQNAKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHC 100

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
            +A + LK       + P+    +I I  +C  G +  AF VL  + K     PN IT +
Sbjct: 101 PVAISLLK-QMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQ-PNNITLT 158

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           T++ GLC NG  ++A++ F + V+   +L D + Y  LI+G C+ G+   A ++++ M+ 
Sbjct: 159 TVMKGLCINGEVQKAMD-FHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEG 217

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
               PN+  Y  +++ FCK+    +A++++ ++ +  + PD + YT+LI  FCR G+  E
Sbjct: 218 QVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGE 277

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
             +L+ EM  +    ++ TFN+++   CR+GK+ EA GM   +   G   +  ++  +++
Sbjct: 278 VKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLIS 337

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C  G + +A +L   +  RG LP   +   L++  CK     D A++LF   EM  K 
Sbjct: 338 GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRI-DEAVSLFN--EMRCKN 394

Query: 483 ---ESDSWALLVELICRGRKLLFAFELLDEL 510
              +   ++ L++ +C+  ++ +A+EL   +
Sbjct: 395 MVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 118/256 (46%), Gaps = 1/256 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ LF  +++  Q LP  + +N +I    +      A  +++ M   G  P++F  +  
Sbjct: 67  DAVTLFNHLINM-QPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N +C  G++  A  V   +     +P+ I  TT++   C  G V +A++    +  +G 
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D V +  ++ GLC+ G+  +A  +L+++    +  N   Y ++++  C+     KA +
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   ++  G  P   T   L+   C+ G   +    +  +V     P   ++ +L++  C
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 496 RGRKLLFAFELLDELV 511
           R  K++ A  + + +V
Sbjct: 306 RKGKMIEAQGMFNLMV 321



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 102/225 (45%)

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +D A  +   + N    P+V  + T++    K      A  +  +M    + P     + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
            INC+C  G +  A  +L  + +RG + + +T   ++ GLC  G++++A+   + +   G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           + L++  Y  ++N  C+ G    A +LL+ M  +   P+    N ++   CK  +   A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
                +V+MG  P+  ++  L+   CR  +     +L+ E+V K 
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN 289



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 35/275 (12%)

Query: 41  DPPVETSDTCVDA--RKRSRFISHGAAISLIKCEKEPQC------------------ALE 80
           +P V T +  +DA  RK     + G    ++K  ++P                    A +
Sbjct: 291 NPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARK 350

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           +F+TV E +G   +  +Y  ++    + K+ +   ++  +M  +       ++ +L+   
Sbjct: 351 LFDTVFE-RGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409

Query: 141 SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHL 196
                     E+F  I+    + P    I+   N+LI++      +D+     K      
Sbjct: 410 CKSGRISYAWELFSTIN---NDGPPPNVIT--YNILIDAFCKIQDIDMGIELFKLMCGK- 463

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            L P    +NILI  +CK   +  A  +L  M+   ++ P+ ITY++L DGLCK+GR  +
Sbjct: 464 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLA-PDSITYNSLFDGLCKSGRISD 522

Query: 257 AIELFEEM-VSKDQILPDALTYNVLIDGFCRGGKV 290
           A ELF+ M V    +  D  TYNVL+D FC+   V
Sbjct: 523 AWELFKVMHVGGPPV--DVATYNVLLDAFCKAQDV 555


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 188/346 (54%), Gaps = 3/346 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP +   ++ L  L +  + D A+   +  +Q   + P+   FNILI   C+ G +E A 
Sbjct: 224 KPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQ-CSVAPDVRSFNILIGGFCRVGEVEEAM 282

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           +  KEM++  ++ P+++++S LI      G+   A     EM     ++PD + Y ++I 
Sbjct: 283 KFYKEMQQRGVT-PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG-LVPDGVIYTMVIG 340

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GFCR G +  A ++ + M   GC P+V  Y TL+NG CK+ +L +A+E+ +EMK   + P
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP 400

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   +TTLI+ +CR G  ++AL+L   +  +  + D+V +N ++ G+CR+G + +A  + 
Sbjct: 401 DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELW 460

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +    I+ N  +Y I+++  C+KG++E+A   L  M+ +G LP+  T N ++   C++
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
           G  +     L  +++    P+  ++  L+    +   +  AF + +
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN 566



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 163/299 (54%), Gaps = 2/299 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP    FN ++K  CK    + A EV + M +  ++ P++ +++ LI G C+ G   EA
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVA-PDVRSFNILIGGFCRVGEVEEA 281

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++ ++EM  +  + PD ++++ LI  F   GK+D A   +  MK  G  P+   YT ++ 
Sbjct: 282 MKFYKEMQQRG-VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC+ G + EA  V DEM      PD + Y TL+N  C+  R+ +A ELL EMKERG   
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP 400

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ TF  ++ G CR+G  E+AL + + L +  +  +  +Y  +++  C+KG+L KA EL 
Sbjct: 401 DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELW 460

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             M  R   P++ T + L+   C+ G  E+A   L  +V  G  P   ++  +++  CR
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCR 519



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 226/472 (47%), Gaps = 24/472 (5%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +  +DAR R+  +   AAI+L+                   KG      T+ ++
Sbjct: 190 PDVVTHNVLIDARFRAGDVD--AAIALVDS--------------MANKGLKPGIVTFNSV 233

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSLHERVLEMFHKIHPI 159
           L  L ++++F+    V R M  + C     +  F  L+  F      E  ++ F+K    
Sbjct: 234 LKGLCKHRRFDKAKEVFRAM--DQCSVAPDVRSFNILIGGFCRVGEVEEAMK-FYKEMQQ 290

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
               P + + S  + L     ++D A  +L+   + L L P+  I+ ++I   C+ G++ 
Sbjct: 291 RGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR-EMKGLGLVPDGVIYTMVIGGFCRAGSMS 349

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  V  EM       P+++TY+TL++GLCK  R  +A EL  EM  +  + PD  T+  
Sbjct: 350 EALRVRDEMV-GLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG-VTPDLCTFTT 407

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI G+CR G  ++A ++ + + +    P+V  Y +L++G C++G L +A E++D+M    
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P+ + Y+ LI+  C  G+V+EA   L EM  +G   +I+T+N I+ G CR G +++  
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
             L+K+  D I  +  ++  +++   ++  +  A  +  +M      P   T N ++   
Sbjct: 528 QFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGF 587

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + G  E+A      +   G +P+  ++  L+           AF+L DE++
Sbjct: 588 SEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMM 639



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 166/314 (52%), Gaps = 2/314 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N    NI++  +CK    + A  V+ EM+K +  +P+++T++ LID   + G    AI L
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEK-RCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            + M +K  + P  +T+N ++ G C+  + D+AK++   M      P+V ++  L+ GFC
Sbjct: 215 VDSMANKG-LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           + G+++EA + + EM+   + PD + ++ LI  F   G++D A   L+EMK  G   D V
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGV 333

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            + +++GG CR G + EAL + +++   G   +  +Y  +LN  C++  L  A ELL  M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG  P   T   L+   C+ G  E A      L+    +P+  ++  L++ +CR   L
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453

Query: 501 LFAFELLDELVIKE 514
             A EL D++  +E
Sbjct: 454 AKANELWDDMHARE 467



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 1/281 (0%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S  S  N  T + ++   CK+  F +A  +  EM  K  + PD +T+NVLID   R G V
Sbjct: 150 SSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEM-EKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D A  +++ M N G  P +  + +++ G CK  +  +AKEVF  M    + PD   +  L
Sbjct: 209 DAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNIL 268

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I  FCR G V+EA++  KEM++RG   D+V+F+ ++G     GK++ A   L ++   G+
Sbjct: 269 IGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGL 328

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +   Y +V+   C+ G + +A+ +   M+  G LP   T N LL  LCK     DA  
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEE 388

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L  + E G  P+  ++  L+   CR      A +L D L+
Sbjct: 389 LLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 158/284 (55%), Gaps = 3/284 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +T LN L + +++  A+  L    +   + P+ C F  LI  +C+ G  E A +
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKER-GVTPDLCTFTTLIHGYCRDGNFEKALQ 423

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +   +   ++  P+++ Y++LIDG+C+ G   +A EL+++M ++ +I P+ +TY++LID 
Sbjct: 424 LFDTLLHQRLR-PDVVAYNSLIDGMCRKGDLAKANELWDDMHAR-EIFPNHVTYSILIDS 481

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C  G+V+ A   ++ M + G  PN+  Y +++ G+C+ G +++ ++   +M    + PD
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I + TLI+ + +   +  A  +   M++   + D VT+N+I+ G   +G +EEA  + +
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           K+   GI  ++ +Y  ++N     G  ++A +L   M+ RGF P
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 145/306 (47%), Gaps = 4/306 (1%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           ++L++   +RG   S  E++  +  S  + P    +  LI    ++ + REA E F  ++
Sbjct: 58  SLLLRMSRRRGA--SRREIVSSLLASSPT-PQPQVFDLLIRTYTQSRKPREAFEAFRLLL 114

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
                +P + +  +L     R G    A++    + ++    N +    +++ +CK  + 
Sbjct: 115 DHRVPVPASASNALLAA-LSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEF 173

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            +A  V  EM+   + PD + +  LI+   RAG VD A+ L+  M  +G K  IVTFN +
Sbjct: 174 DKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSV 233

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC+  + ++A  +   +    +  +  S+ I++   C+ GE+E+A++  + M  RG 
Sbjct: 234 LKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGV 293

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   + + L+      G  + AA  L  +  +G  P+   + +++   CR   +  A  
Sbjct: 294 TPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353

Query: 506 LLDELV 511
           + DE+V
Sbjct: 354 VRDEMV 359


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 227/436 (52%), Gaps = 9/436 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++FN +   KG   N  +Y TI+  L    + +   ++ ++M  + C      +  ++
Sbjct: 268 AYKVFNMMP-NKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVII 326

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                   +   +++F+++   + E P++   +  ++ + +  ++D ++  L   N+ + 
Sbjct: 327 HALFGNDRNLEGMDLFNEMRERSCE-PNVHTYTVMVDAMCKERKLDESRRIL---NEMME 382

Query: 198 --LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L P+   +N LI+ +C+ G +E+A E+L  M+ S    PN  TY+ LI G  K     
Sbjct: 383 KGLVPSVVTYNALIRGYCEEGRIEAALEILGLME-SNNCRPNERTYNELICGFSKRKHVH 441

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ L  +M+ + ++ P  +TYN LI   C+ G  D A K+++ +K NG  P+ + Y+  
Sbjct: 442 KAMTLLSKML-ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVF 500

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++  CK  +++EA ++F+ +K   +K + + YT LI+  C+AG++DEA+ LL+ M    C
Sbjct: 501 IDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDC 560

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  T+N ++ G+C+EGK++E L M+E +   G+    A+Y I++    ++G+ + A  
Sbjct: 561 LPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANR 620

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +   M+  G  P   T    +   C +G  ++A   +  ++E G  P+S ++ LL+    
Sbjct: 621 VFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYE 680

Query: 496 RGRKLLFAFELLDELV 511
           R      AF +L  ++
Sbjct: 681 RLGLAYDAFNVLKRML 696



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 184/363 (50%), Gaps = 17/363 (4%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           EK  +  I  C+++    + +    +FL+  N+      N   F + ++ + +   + + 
Sbjct: 140 EKIRISMIKACVSV----DDIRFLLDFLRQMNR----DDNDIKFKLSVRSYNELLMMLAR 191

Query: 222 FEVLKEMKK------SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           F ++ EMK+      + M  PN+ T +T+++   K G   EA  L+   + +  + PD+ 
Sbjct: 192 FLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA-NLYVSKIFQAGLSPDSF 250

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TY  LI G+CR   V+ A K+   M N GC  N  +YTT+++G C+ G++ E   +F +M
Sbjct: 251 TYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKM 310

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +     P    YT +I+      R  E ++L  EM+ER C+ ++ T+ +++  +C+E K+
Sbjct: 311 REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKL 370

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +E+  +L ++   G+  +  +Y  ++   C++G +E A+E+L LM      P+  T NEL
Sbjct: 371 DESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNEL 430

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           +    K      A   L  ++E    P   ++  L+ + C+      A++LLD  ++KE+
Sbjct: 431 ICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLD--LLKEN 488

Query: 516 GTI 518
           G +
Sbjct: 489 GLV 491


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 210/421 (49%), Gaps = 4/421 (0%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T+ T++  L    K      ++ +M    C+     + +++            
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L++  K+      K  +   ST ++ L     +D A +  K       +K +   +N L+
Sbjct: 213 LDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLV 270

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
           +  CK G       +LK+M   ++  PN+IT++ L+D   K G+ +EA EL++EM+++  
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITR-G 328

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ +TYN L+DG+C   ++  A  +++ M  N C+P++  +T+L+ G+C   ++ +  
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +VF  +    L  + + Y+ L+  FC++G++  A EL +EM   G   D++T+ I+L GL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  GK+E+AL + E L    + L    Y  ++   C+ G++E A  L   + C+G  P+ 
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T   ++  LCK G   +A I L  + E G  P   ++  L+    R   L  + +L++E
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568

Query: 510 L 510
           +
Sbjct: 569 M 569



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 165/298 (55%), Gaps = 2/298 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN+L+    K G L+ A E+ KEM    +S PN+ITY+TL+DG C   R  EA  
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANN 354

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + + MV +++  PD +T+  LI G+C   +VD   K+   +   G   N   Y+ L+ GF
Sbjct: 355 MLDLMV-RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ GK++ A+E+F EM +  + PD + Y  L++  C  G++++ALE+ +++++      I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +  I+ G+C+ GK+E+A  +   L   G+  N  +Y ++++  C+KG L +A  LLR 
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           M   G  P+  T N L+    + G    +A  +  +   GF  ++ S  ++++++  G
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 179/353 (50%), Gaps = 5/353 (1%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PSL   S   + +  + Q +L  +F K    +  +  N    NI+I   C+     
Sbjct: 82  SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTC 140

Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A+ VL ++ K  + Y P+  T++TLI GL   G+  EA+ L + MV ++   PD +TYN
Sbjct: 141 FAYSVLGKVMK--LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV-ENGCQPDVVTYN 197

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            +++G CR G    A  ++  M+      +VF Y+T+++  C++G +  A  +F EM+  
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            +K   + Y +L+   C+AG+ ++   LLK+M  R    +++TFN++L    +EGK++EA
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             + +++   GI  N  +Y  +++  C +  L +A  +L LM+     P   T   L+  
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            C     +D       + + G    + ++++LV+  C+  K+  A EL  E+V
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 1/258 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +AI LF+EM+ + + LP  + ++       R  + +      + ++ NG   N++    +
Sbjct: 71  DAIALFQEMI-RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N FC+  K   A  V  ++     +PDT  + TLI      G+V EA+ L+  M E GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D+VT+N I+ G+CR G    AL +L K+    +  +  +Y  +++  C+ G ++ AI 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L + M  +G      T N L+  LCKAG   D A+ L  +V     P   ++ +L+++  
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 496 RGRKLLFAFELLDELVIK 513
           +  KL  A EL  E++ +
Sbjct: 310 KEGKLQEANELYKEMITR 327


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 210/438 (47%), Gaps = 5/438 (1%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
             A E++N + E  G      TY T+LD   +    +    +L QM    C  ++  +  
Sbjct: 184 DVAREVYNVMVEC-GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNV 242

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+   S+    E+  E+   +  +  E  S+      +    E  Q++ A   L      
Sbjct: 243 LVNGLSHSGEMEQAKELIQDMLRLGLEV-SVYTYDPLIRGYCEKGQIEEASR-LGEEMLS 300

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P    +N ++   CK G +  A ++L  M    +  P+L++Y+TLI G  + G   
Sbjct: 301 RGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNL-MPDLVSYNTLIYGYTRLGNIG 359

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA  LF E+  +  + P  +TYN LIDG CR G +D A ++ + M  +G +P+VF +TT 
Sbjct: 360 EAFLLFAELRYR-SLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + GFCK G L  AKE+FDEM N  L+PD   Y T I    + G   +A  + +EM  RG 
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 478

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D++T+N+ + GL + G ++EA  +++K+ Y+G+  +  +Y  +++     G L KA  
Sbjct: 479 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARA 538

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   ML +G  P   T   L+      G  + A +  F + E G  P   ++  L+  +C
Sbjct: 539 LFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLC 598

Query: 496 RGRKLLFAFELLDELVIK 513
           + RK+  A+    E+  K
Sbjct: 599 KVRKMDQAYNFFAEMQAK 616



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 157/314 (50%), Gaps = 36/314 (11%)

Query: 183 DLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           ++ + FL ++    R L P+   +N LI   C+ G L+ A  +  EM K     P++ T+
Sbjct: 357 NIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPD-PDVFTF 415

Query: 242 STLIDGLCKNGRFREAIELFEEMVSK-----------------------------DQIL- 271
           +T + G CK G    A ELF+EM+++                             +++L 
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 475

Query: 272 ----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               PD +TYNV IDG  + G +  A ++++ M  NG  P+   YT++++     G L++
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 535

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+ +F EM +  + P  + YT LI+ +   GR+  A+    EM E+G   +++T+N ++ 
Sbjct: 536 ARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALIN 595

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+  K+++A     ++   GI  NK +Y I++N +C  G  ++A+ L + ML R   P
Sbjct: 596 GLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 655

Query: 448 HYATSNELLVRLCK 461
              T   LL  L K
Sbjct: 656 DSCTHRSLLKHLNK 669



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 2/298 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N LI  + + G +  AF +  E++   ++ P+++TY+TLIDGLC+ G    A
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLA-PSVVTYNTLIDGLCRLGDLDVA 396

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L +EM+ K    PD  T+   + GFC+ G +  AK++ + M N G  P+ F Y T + 
Sbjct: 397 MRLKDEMI-KHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIV 455

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  K G   +A  + +EM      PD I Y   I+   + G + EA EL+K+M   G   
Sbjct: 456 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 515

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT+  I+      G + +A  +  ++   GI+ +  +Y ++++    +G L+ AI   
Sbjct: 516 DHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHF 575

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
             M  +G  P+  T N L+  LCK    + A      +   G  P   ++ +L+   C
Sbjct: 576 FEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENC 633



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 169/347 (48%), Gaps = 16/347 (4%)

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM----------- 228
           N+  +A  F +++ +    K +   +++++    + G + SA+ V++++           
Sbjct: 59  NRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVID 118

Query: 229 --KKSQMSYPNL-ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF- 284
               S++S P++ +    L+    K     + + +F +MVSK  +LPD    N ++    
Sbjct: 119 VVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKG-LLPDVKNCNRVLRLLR 177

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
            R   +D A+++   M   G  P V  Y T+++ FCK+G +QEA ++  +M+     P+ 
Sbjct: 178 DRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPND 237

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + Y  L+N    +G +++A EL+++M   G +  + T++ ++ G C +G+IEEA  + E+
Sbjct: 238 VTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEE 297

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G      +Y  ++   C+ G +  A +LL +M+ +  +P   + N L+    + G 
Sbjct: 298 MLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGN 357

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             +A +    L      P   ++  L++ +CR   L  A  L DE++
Sbjct: 358 IGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMI 404



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 24/277 (8%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG-KVDRAKKIM 297
           I+YS ++D L +NG  R A  + E++VS           N +ID        +   K I+
Sbjct: 82  ISYSVILDILARNGLMRSAYCVMEKVVSVKM-------ENGVIDVVSSSEVSMPSVKLIL 134

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF-CR 356
           +                L+  + K+  L++   VF +M +  L PD      ++     R
Sbjct: 135 DL---------------LLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDR 179

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
              +D A E+   M E G    +VT+N +L   C++G ++EAL +L ++   G   N  +
Sbjct: 180 DNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVT 239

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +++N     GE+E+A EL++ ML  G      T + L+   C+ G  E+A+     ++
Sbjct: 240 YNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEML 299

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             G  P   ++  ++  +C+  ++  A +LLD +V K
Sbjct: 300 SRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNK 336



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + +LI  +  RG L+ A     EM +  + +PN+ITY+ LI+GLCK  +  +A  
Sbjct: 550 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGV-HPNVITYNALINGLCKVRKMDQAYN 608

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F EM +K  I P+  TY +LI+  C  G    A ++ + M +    P+   + +L+   
Sbjct: 609 FFAEMQAKG-ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667

Query: 320 CKEGKLQEAKEV 331
            K+ KL   + +
Sbjct: 668 NKDYKLHVVRHL 679


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 226/484 (46%), Gaps = 87/484 (17%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE- 130
           + +P  A+  F    +QK + HN   Y +++D LA     ++V +V         KF E 
Sbjct: 121 QTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVF-------SKFKEM 173

Query: 131 GIFL------NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
           G+ +      +L+K F N  + E VL ++ ++     E PSL + +  +N L+ S  ++ 
Sbjct: 174 GLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIE-PSLFSYNFLVNGLVNSKFIES 232

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A+   +   ++ ++ P+   +N +IK +C+ G    AFE LK M+   ++ P+ ITY TL
Sbjct: 233 AERVFEVM-ENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVA-PDKITYMTL 290

Query: 245 ID-----------------------------------GLCKNGRFREAIELFEEMVS--- 266
           I                                    GLCK+G+  E   +FE M+S   
Sbjct: 291 IQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGC 350

Query: 267 -------------------------------KDQILPDALTYNVLIDGFCRGGKVDRAKK 295
                                          K+ + PD +TY V+++  C+ G++D A +
Sbjct: 351 KANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALE 410

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
            MEF    G   N   Y++L++G  K G++ EA+ +F EM      PD+  Y  LI+   
Sbjct: 411 YMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALA 470

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G++DEAL L K M+  GC   + T+ I++ GL RE + EEAL + + +   GI    A
Sbjct: 471 KCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAA 530

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++R +    C  G++ +A ++L  M   G +P  A  ++++  LCKAG  ++A     G+
Sbjct: 531 AFRALSTGLCLSGKVARACKILDEMAPMGVIPETAF-DDMINILCKAGRIKEACKLADGI 589

Query: 476 VEMG 479
           V+ G
Sbjct: 590 VDRG 593



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 154/301 (51%), Gaps = 2/301 (0%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N LIK     G +E    V + MK++ +  P+L +Y+ L++GL  N +F E+ E   E++
Sbjct: 183 NSLIKSFGNLGMVEEVLWVWRRMKENGIE-PSLFSYNFLVNGLV-NSKFIESAERVFEVM 240

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
              +I PD +TYN +I G+C  GK  +A + ++ M+     P+   Y TL+     EG  
Sbjct: 241 ENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDF 300

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
                ++ EM    L+     Y+ +I   C+ G+  E   + + M  +GCKA++  +  +
Sbjct: 301 DSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTAL 360

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +    + G + EA+ + +++  +G+  ++ +Y +++N  C+ G L++A+E +     +G 
Sbjct: 361 IDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGV 420

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
             +    + L+  L K+G  ++A    + +V+ G  P+S  +  L++ + +  K+  A  
Sbjct: 421 AVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALA 480

Query: 506 L 506
           L
Sbjct: 481 L 481



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 131/248 (52%), Gaps = 3/248 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   + +++   CK G L+ A E + E    +    N + YS+LIDGL K+GR  EA
Sbjct: 385 LEPDEVTYGVIVNSLCKSGRLDEALEYM-EFCSGKGVAVNAMFYSSLIDGLGKSGRVDEA 443

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F EMV K    PD+  YN LID   + GK+D A  + + M+ +GC+  V+ YT L+ 
Sbjct: 444 ERIFYEMVKKG-CPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILIT 502

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  +E + +EA  ++D M +  + P    +  L    C +G+V  A ++L EM   G   
Sbjct: 503 GLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIP 562

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +   F+ ++  LC+ G+I+EA  + + +   G  +      +++N   + G  + A++L+
Sbjct: 563 E-TAFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLM 621

Query: 438 RLMLCRGF 445
           R  +  G+
Sbjct: 622 RSKIGIGY 629



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 1/272 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           NL  Y +LID L  NG       +F +      I+    + N LI  F   G V+    +
Sbjct: 143 NLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMT-VYSSNSLIKSFGNLGMVEEVLWV 201

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
              MK NG  P++F+Y  L+NG      ++ A+ VF+ M+N  + PD + Y T+I  +C 
Sbjct: 202 WRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCE 261

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G+  +A E LK M+ R    D +T+  ++     EG  +  LG+  ++   G+ +    
Sbjct: 262 VGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHV 321

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +V+   C+ G+  +   +   M+ +G   + A    L+    K G   +A +    + 
Sbjct: 322 YSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMK 381

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLD 508
           + G +P+  ++ ++V  +C+  +L  A E ++
Sbjct: 382 KEGLEPDEVTYGVIVNSLCKSGRLDEALEYME 413


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 226/450 (50%), Gaps = 24/450 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL---RQMTYETCKFHEGIFL 134
           AL+ FN   E  G+ H   +Y ++L+ L R +        L    + +    K     F 
Sbjct: 95  ALQFFNWAQEM-GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFN 153

Query: 135 NLMKHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           +LM++F+   L +  +++F   K H ++   PS+   ++ L +L++  + ++A+      
Sbjct: 154 SLMRNFNRAGLFQESIKVFTIMKSHGVS---PSVVTFNSLLTILLKRGRTNMAKKVYDEM 210

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                + P+T  FNILI+  C  G ++  F +  ++ +     P+++TY+TL+DGLC+ G
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCE-PDVVTYNTLVDGLCRAG 269

Query: 253 RFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           +   A  + + M  K   L P+ +TY  LI G+C   ++++A  + E M N G   N   
Sbjct: 270 KVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNIT 329

Query: 312 YTTLMNGFCKEGKLQEAKEVFD-EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           Y TL+ G C+  K ++ K++ +    +    PDT  + TL++C C AG +D+AL++ + M
Sbjct: 330 YNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERM 389

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK-------ASYRIVLNF 423
            E   + D  T++ ++  LC+ G  E+A  +L+KL    I L+        A+Y  +  +
Sbjct: 390 SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKY 449

Query: 424 SCQKGELEKAIELLRLMLCRGFL--PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
            C+ G+ +KA +  R ++ RG    P Y T   L++  CK G  E     L  ++   F 
Sbjct: 450 LCETGKTKKAEKAFRQLMRRGTQDPPSYKT---LIMGHCKEGTFESGYELLVLMLRKDFL 506

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELV 511
           P+ +++  L+  +    K L A + L++++
Sbjct: 507 PDFETYESLINGLLHMDKPLLALQSLEKML 536



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 177/391 (45%), Gaps = 54/391 (13%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +P +   +T ++ L  + +V +A N +K    + + L PN   +  LI+ +C +  +E A
Sbjct: 252 EPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKA 311

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR-------------------------- 255
             V +EM    +   N ITY+TLI GLC+  +F                           
Sbjct: 312 LAVFEEMVNQGLKANN-ITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLM 370

Query: 256 ----------EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME------- 298
                     +A+++FE M S+ +I PD+ TY+ L+   C+GG  ++A+ +++       
Sbjct: 371 HCHCHAGNLDDALKVFERM-SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE-MKNFLLKPDTIGYTTLINCFCRA 357
            +  +GC P V  Y  +    C+ GK ++A++ F + M+     P +  Y TLI   C+ 
Sbjct: 430 LLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPS--YKTLIMGHCKE 487

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G  +   ELL  M  +    D  T+  ++ GL    K   AL  LEK+       N +++
Sbjct: 488 GTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTF 547

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +L    ++G   ++  L++LML +    + + S   +  L  AGM + A    F LV 
Sbjct: 548 HSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKA----FQLVH 603

Query: 478 MGF-KPESDSWALLVELICRGRKLLFAFELL 507
           + + K  S     L+  +C  RK++   +LL
Sbjct: 604 LLYGKGYSVKMEELIRYLCHCRKVIQGSKLL 634



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 196/449 (43%), Gaps = 58/449 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLN 135
              IFN +S + G   +  TY T++D L R  K      V++ M  ++   +  +  +  
Sbjct: 239 GFRIFNDLS-RFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTT 297

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI----ESNQVDLAQNFLKY 191
           L++ +      E+ L +F ++         LKA +   N LI    E+ + +  ++ L+ 
Sbjct: 298 LIRGYCAKREIEKALAVFEEM-----VNQGLKANNITYNTLIKGLCEARKFEKIKDILEG 352

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           +       P+TC FN L+  HC  G L+ A +V + M + ++  P+  TYS L+  LC+ 
Sbjct: 353 TAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQ-PDSATYSALVRSLCQG 411

Query: 252 GRFREAIELFEEMVSKDQIL------PDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNG 304
           G + +A +L ++++ +  +L      P    YN +    C  GK  +A+K   + M+   
Sbjct: 412 GHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGT 471

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDE 362
            +P   +Y TL+ G CKEG  +   E+   M  K+FL  PD   Y +LIN      +   
Sbjct: 472 QDPP--SYKTLIMGHCKEGTFESGYELLVLMLRKDFL--PDFETYESLINGLLHMDKPLL 527

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           AL+ L++M     + +  TF+ IL  L  +G+  E+  +++ +    I  N +     + 
Sbjct: 528 ALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVR 587

Query: 423 FSCQKGELEKAIELLRLMLCRGF------LPHYATS------------------------ 452
                G  +KA +L+ L+  +G+      L  Y                           
Sbjct: 588 LLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMD 647

Query: 453 --NELLVRLCKAGMAEDAAIALFGLVEMG 479
             N ++ +LC+     +A    + LVEMG
Sbjct: 648 LCNTVIFQLCEINKLSEAFSLYYKLVEMG 676



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 186/448 (41%), Gaps = 66/448 (14%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR------QMTYET 125
           ++E + AL +F  +  Q G   NN TY T++  L   +KFE +  +L         + +T
Sbjct: 305 KREIEKALAVFEEMVNQ-GLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDT 363

Query: 126 CKFHEGIFLNLMKHFSNCSLH----ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           C F      N + H   C  H    +  L++F ++  + + +P     S  +  L +   
Sbjct: 364 CTF------NTLMH---CHCHAGNLDDALKVFERMSEL-KIQPDSATYSALVRSLCQGGH 413

Query: 182 VDLAQNFL-KYSNQHLRL-----KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
            + A++ L K   + + L     KP    +N + K+ C+ G  + A +  +++ +     
Sbjct: 414 YEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQD 473

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P   +Y TLI G CK G F    EL   M+ KD  LPD  TY  LI+G     K   A +
Sbjct: 474 PP--SYKTLIMGHCKEGTFESGYELLVLMLRKD-FLPDFETYESLINGLLHMDKPLLALQ 530

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
            +E M  +   PN   + +++    ++G+  E+  +   M +  ++ +    T  +    
Sbjct: 531 SLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLF 590

Query: 356 RAGRVDEALELLKEMKERG--------------CK------------------ADIVTFN 383
            AG  D+A +L+  +  +G              C+                   D+   N
Sbjct: 591 GAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCN 650

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE-LEKAIELLRLM-- 440
            ++  LC   K+ EA  +  KL   G++  + S +  L  S + GE LE+A  + + M  
Sbjct: 651 TVIFQLCEINKLSEAFSLYYKLVEMGVH-QQLSCQNQLKVSLEAGEKLEEAEFVSKRMEP 709

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +  G     +  N+L   L   G  E+A
Sbjct: 710 VEMGVHQQLSCQNQLKFSLKAGGKLEEA 737


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 220/433 (50%), Gaps = 13/433 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + G+     T++ +L  L   K+  EA+D  LR+M    C  +   +  L+K   + +  
Sbjct: 119 RSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRS 178

Query: 147 ERVLEMFHKIHPITREK----PSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLR--LK 199
           ++ L + H +      +    P + + +T +N LL E  Q+D A +     +Q L   L 
Sbjct: 179 QQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLF---DQMLDQGLS 235

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N +I    K   ++ A  VL  M K+  + PN IT+++L+ G C +G+  +AI 
Sbjct: 236 PDVVTYNSIISALSKARAMDKAAVVLVRMVKNG-AMPNRITHNSLLHGYCSSGKPNDAIG 294

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+ M  +D + PD  TYN L+   C+ G+   A+KI + M   G  PN   Y TL++G+
Sbjct: 295 VFKRMC-RDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGY 353

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             EG L +   + D M    ++PD   +  LI  + + G+VD+A+ L  +M+ +G   D 
Sbjct: 354 ATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDT 413

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+ I++  LC  GK+++A+    +L  +G+  +   +R +++  C + + +KA EL   
Sbjct: 414 VTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVE 473

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P+    N LL  LCK GM   A      +V +  + +  ++  L++  C   K
Sbjct: 474 MIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGK 533

Query: 500 LLFAFELLDELVI 512
           +  A +LL+ +V+
Sbjct: 534 VDEAAKLLEGMVL 546



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 198/389 (50%), Gaps = 11/389 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +IF+++  ++G   N+ATY T+L   A       +  +L  M     +    IF  L+
Sbjct: 327 ARKIFDSMV-KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILI 385

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQ-NFLKYSNQ 194
             ++     +  + +F K+    R+   P        ++ L    +VD A   F +  ++
Sbjct: 386 GTYTKHGKVDDAMLLFSKMR---RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            L   P+  +F  LI   C R   + A E+  EM    +  PN I ++TL++ LCK G  
Sbjct: 443 GL--TPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGIC-PNNIFFNTLLNHLCKEGMV 499

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A  +F+ MV  D +  D +TYN LIDG+C  GKVD A K++E M  +G  PN   Y T
Sbjct: 500 ARAKNIFDLMVRVD-VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNT 558

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++NG+CK G++++A  +F +M +  + P  + Y+T++    +A R   A EL   M + G
Sbjct: 559 MINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSG 618

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            K DI T+NIIL GLC+    ++AL + + L+    +L   ++ I+++   + G  ++A 
Sbjct: 619 IKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAK 678

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           +L   +L RG +P+  T   ++  L + G
Sbjct: 679 DLFASLLARGLVPNVVTYWLMMKSLIEQG 707



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 168/316 (53%), Gaps = 2/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+  IFNILI  + K G ++ A  +  +M++  ++ P+ +TY  ++D LC  G+  +A
Sbjct: 374 IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLN-PDTVTYGIVMDALCMVGKVDDA 432

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +  F  ++S + + PDA+ +  LI G C   K D+A+++   M   G  PN   + TL+N
Sbjct: 433 MAQFGRLIS-EGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLN 491

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CKEG +  AK +FD M    ++ D I Y TLI+ +C  G+VDEA +LL+ M   G K 
Sbjct: 492 HLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKP 551

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VT+N ++ G C+ G+IE+A  +  ++   G+     +Y  +L    Q      A EL 
Sbjct: 552 NEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELY 611

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G      T N +L+ LC+    +DA      L  + F  E+ ++ ++++ + +G
Sbjct: 612 LWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKG 671

Query: 498 RKLLFAFELLDELVIK 513
            +   A +L   L+ +
Sbjct: 672 GRHDEAKDLFASLLAR 687



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 8/283 (2%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PNLITYS +ID   + G    A      ++ +     +A+T++ L+   C   +   A  
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVI-RSGWTAEAITFSPLLKALCDKKRTSEAMD 147

Query: 296 I-MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-----KNFLLKPDTIGYTT 349
           I +  M   GC PNVF+YT L+ G C E + Q+A  +   M           PD + Y T
Sbjct: 148 IALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNT 207

Query: 350 LINCFCRAGR-VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           +IN   R GR +D A  L  +M ++G   D+VT+N I+  L +   +++A  +L ++  +
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN 267

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N+ ++  +L+  C  G+   AI + + M   G  P   T N L+  LCK G + +A
Sbjct: 268 GAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEA 327

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                 +V+ G KP S ++  L+        L+    LLD +V
Sbjct: 328 RKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMV 370


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 214/459 (46%), Gaps = 74/459 (16%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  +Y  +L  L   K++  V  ++ +M    C  +   F  L+ +     L ERV
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 281

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E+  +                    ++E                     P+  ++  +I
Sbjct: 282 HEVLAQ--------------------MVEHG-----------------CTPDIRMYATII 304

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G LE A E+L  M    +  PN++ Y+TL+ GLC   R+ E  EL  EM  KD 
Sbjct: 305 DGICKEGHLEVAHEILNRMPSYGLK-PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            L D +T+N+L+D FC+ G VDR  +++E M   GC P+V  YTT++NGFCKEG + EA 
Sbjct: 364 PL-DDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAV 422

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +   M     KP+TI YT ++   C A R  +A +L+ +M ++GC  + +TFN ++  L
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH- 448
           C++G +E+A+ +L+++  +G   +  SY  V++   + G+ ++A+ELL +M+ +G  P+ 
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 542

Query: 449 --YAT--------------------------------SNELLVRLCKAGMAEDAAIALFG 474
             Y++                                 N ++  LCK G  E A   L  
Sbjct: 543 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY 602

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +V  G  P   ++ +L+  +     +  A E+L EL  K
Sbjct: 603 MVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 205/423 (48%), Gaps = 10/423 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++  L    +     AVL +M    C     ++  +++           + + 
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180

Query: 154 HKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
             +H     +     +  C   LN + +   VD A + L+        +P+   +N ++K
Sbjct: 181 EDLH----ARGCALDVGNCNLVLNAICDQGSVDEALHLLR-DLPSFGCEPDVVSYNAVLK 235

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             C         E+++EM +     PN++T++TLI  LC+NG F    E+  +MV +   
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACP-PNIVTFNTLISYLCRNGLFERVHEVLAQMV-EHGC 293

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PD   Y  +IDG C+ G ++ A +I+  M + G  PNV  Y TL+ G C   + +E +E
Sbjct: 294 TPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 353

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  EM +     D + +  L++ FC+ G VD  +ELL++M ERGC  D++T+  ++ G C
Sbjct: 354 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFC 413

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           +EG I+EA+ +L+ +   G   N  SY IVL   C       A +L+  M+ +G   +  
Sbjct: 414 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 473

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N L+  LCK G+ E A   L  ++  G  P+  S++ +++ + +  K   A ELL+ +
Sbjct: 474 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533

Query: 511 VIK 513
           V K
Sbjct: 534 VNK 536



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 169/348 (48%), Gaps = 35/348 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +  +++  C RG +  A  VL EM +   + P    Y  +++  C+ G FR A
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCA-PIPPMYHVILEAACRGGGFRSA 176

Query: 258 IELFEEMVSK----------------------DQIL------------PDALTYNVLIDG 283
           + + E++ ++                      D+ L            PD ++YN ++ G
Sbjct: 177 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 236

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C   +    +++ME M    C PN+  + TL++  C+ G  +   EV  +M      PD
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 296

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y T+I+  C+ G ++ A E+L  M   G K ++V +N +L GLC   + EE   +L 
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           +++     L+  ++ I+++F CQ G +++ IELL  ML RG +P   T   ++   CK G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEG 416

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + ++A + L  +   G KP + S+ ++++ +C   + + A +L+ +++
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 188/363 (51%), Gaps = 12/363 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS--- 144
           + G   +   YATI+D + +    E    +L +M     K +   +  L+K   +     
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWE 349

Query: 145 -LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
              E + EMF K  P+     ++     C N L++   ++L +  L+         P+  
Sbjct: 350 ETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD-RVIELLEQMLERG-----CMPDVI 403

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +  +I   CK G ++ A  +LK M       PN I+Y+ ++ GLC   R+ +A +L  +
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCK-PNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+ +   L + +T+N LI+  C+ G V++A ++++ M  NGC+P++ +Y+T+++G  K G
Sbjct: 463 MIQQGCPL-NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 521

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K  EA E+ + M N  + P+TI Y+++ +   R GR+++ +++   +++   ++D V +N
Sbjct: 522 KTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYN 581

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++  LC+ G+ E A+  L  +   G   N+++Y I++     +G +++A E+L  +  +
Sbjct: 582 AVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641

Query: 444 GFL 446
           G L
Sbjct: 642 GAL 644



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 130/277 (46%), Gaps = 10/277 (3%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ ++ G C+ G+   A      + +   + P+A TY  ++   C  G++  A  +++ M
Sbjct: 93  YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              GC P    Y  ++   C+ G  + A  V +++       D      ++N  C  G V
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLC---REGKIEEALGMLEKLWYDGIYLNKASY 417
           DEAL LL+++   GC+ D+V++N +L GLC   R G ++E   ++E++       N  ++
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTF 265

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++++ C+ G  E+  E+L  M+  G  P       ++  +CK G  E A   L  +  
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 325

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            G KP    +  L++ +C   +     ELL E+  K+
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 29/197 (14%)

Query: 344 TIGYTTLINCFCRAGRVDEALELL------------KEMKERGCKA-------------- 377
           ++  ++LI   C AGR  EA   L              M    C+A              
Sbjct: 58  SVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAVP 117

Query: 378 ---DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +  T+  ++  LC  G+I +AL +L+++   G       Y ++L  +C+ G    A+
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +L  +  RG        N +L  +C  G  ++A   L  L   G +P+  S+  +++ +
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 495 CRGRKLLFAFELLDELV 511
           C  ++     EL++E+V
Sbjct: 238 CMAKRWGCVQELMEEMV 254


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 188/348 (54%), Gaps = 3/348 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P L + S+ + +   + ++  A  + +   + + L P+T I+ ILI  +C+   +  A +
Sbjct: 362 PDLISFSSIVGVFSRNGELGRALAYFE-KMKGVGLVPDTVIYTILINGYCRNDDVSGALK 420

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  EM + +    +++TY+TL++GLC+     +A ELF+EMV +  + PD  T   LI G
Sbjct: 421 MRNEMVE-RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG-VFPDFYTLTTLIHG 478

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+ G + +A  + E M      P+V  Y TLM+GFCK G++++AKE++ +M +  + P 
Sbjct: 479 YCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPS 538

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I ++ LIN FC  G V EA  L  EMKE+G K  +VT N I+ G  R G + +A   L 
Sbjct: 539 YISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLN 598

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +  +G+  +  +Y  ++N   ++   ++A  L+  M  RG LP+  T N +L    + G
Sbjct: 599 TMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHG 658

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             ++A + L  +++ G  P+  ++  L+        +  AF + DE++
Sbjct: 659 RMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEML 706



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 191/391 (48%), Gaps = 48/391 (12%)

Query: 165 SLKAISTCLNLLIESNQVDLA----QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           S+ A +  L  +++   VDLA    ++F+K  N       N    NI++   CK G L++
Sbjct: 188 SINACNALLGAIVKVGWVDLAWKVYEDFVKSGNI-----VNVYTLNIMVNALCKDGKLDN 242

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
               L EM++  + Y +L+TY+TL++  C+ G   EA  L + M  K  + P   TYN L
Sbjct: 243 VGVYLSEMEEKGV-YADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG-LKPGLFTYNAL 300

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPN----------------------VFN------- 311
           I+G C+ G  +RAK++++ M   G  PN                      VFN       
Sbjct: 301 INGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGV 360

Query: 312 ------YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
                 +++++  F + G+L  A   F++MK   L PDT+ YT LIN +CR   V  AL+
Sbjct: 361 VPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALK 420

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           +  EM ERGC  D+VT+N +L GLCR   +++A  + +++   G++ +  +   +++  C
Sbjct: 421 MRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYC 480

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G + KA+ L   M  R   P   T N L+   CK G  E A    + ++     P   
Sbjct: 481 KDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYI 540

Query: 486 SWALLVELICRGRKLLFAFELLDELVIKESG 516
           S+++L+   C    +  AF L DE+  KE G
Sbjct: 541 SFSILINGFCSLGLVSEAFRLWDEM--KEKG 569



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 153/278 (55%), Gaps = 3/278 (1%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +T LN L     +D A    K   +   + P+      LI  +CK G +  A  + + M 
Sbjct: 438 NTLLNGLCRGKMLDDADELFKEMVER-GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT 496

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
              +  P+++TY+TL+DG CK G   +A EL+ +M+S+ +I P  +++++LI+GFC  G 
Sbjct: 497 LRSLK-PDVVTYNTLMDGFCKVGEMEKAKELWYDMISR-EIFPSYISFSILINGFCSLGL 554

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           V  A ++ + MK  G  P +    T++ G+ + G L +A +  + M +  + PD I Y T
Sbjct: 555 VSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNT 614

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LIN F +    D A  L+  M+ERG   ++VT+N ILGG  R G+++EA  +L K+   G
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           I  +K++Y  ++N    K  +++A  +   ML RGF+P
Sbjct: 675 INPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 159/314 (50%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP    +N LI   CK G+ E A  VL EM    +  PN  T++ ++   C+     EA
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLC-PNAATFNPMLVESCRKEDVWEA 348

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F EM+ +  ++PD ++++ ++  F R G++ RA    E MK  G  P+   YT L+N
Sbjct: 349 ERVFNEMLQRG-VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 407

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C+   +  A ++ +EM       D + Y TL+N  CR   +D+A EL KEM ERG   
Sbjct: 408 GYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP 467

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T   ++ G C++G + +AL + E +    +  +  +Y  +++  C+ GE+EKA EL 
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 527

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ R   P Y + + L+   C  G+  +A      + E G KP   +   +++   R 
Sbjct: 528 YDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 587

Query: 498 RKLLFAFELLDELV 511
             L  A + L+ ++
Sbjct: 588 GNLSKANDFLNTMI 601



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 7/302 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ N + E +G   +  TY T+L+ L R K  +  D + ++M  E   F +   L  +
Sbjct: 418 ALKMRNEMVE-RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMV-ERGVFPDFYTLTTL 475

Query: 138 KH-FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
            H +       + L +F  +  +   KP +   +T ++   +  +++ A+  L Y     
Sbjct: 476 IHGYCKDGNMTKALSLFETM-TLRSLKPDVVTYNTLMDGFCKVGEMEKAKE-LWYDMISR 533

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+   F+ILI   C  G +  AF +  EMK+  +  P L+T +T+I G  + G   +
Sbjct: 534 EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIK-PTLVTCNTIIKGYLRAGNLSK 592

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A +    M+S + + PD +TYN LI+ F +    DRA  ++  M+  G  PN+  Y  ++
Sbjct: 593 ANDFLNTMIS-EGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAIL 651

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            GF + G++QEA+ V  +M +  + PD   YT+LIN +     + EA  +  EM +RG  
Sbjct: 652 GGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFV 711

Query: 377 AD 378
            D
Sbjct: 712 PD 713



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 39/233 (16%)

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMK-------------------------------- 336
           V  +  L+  + +  KL+E  E F  ++                                
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 337 NFLLKPDTIGYTTL---INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           +F+   + +   TL   +N  C+ G++D     L EM+E+G  AD+VT+N ++   CR G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            + EA G+++ +   G+     +Y  ++N  C++G  E+A  +L  ML  G  P+ AT N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR----GRKLLF 502
            +LV  C+     +A      +++ G  P+  S++ +V +  R    GR L +
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAY 386



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 8/169 (4%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           +  LI  + +A ++ E  E  + +++RG    I   N +LG + + G ++ A  + E   
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G  +N  +  I++N  C+ G+L+     L  M  +G      T N L+   C+ G+  
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 467 DAAIALFGLVE----MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +A    FGLV+     G KP   ++  L+  +C+      A  +LDE++
Sbjct: 277 EA----FGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEML 321


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 154/271 (56%), Gaps = 2/271 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+  I+N ++   C+   +E A  + ++M K +++ PN++TY+TLI+GLCK  R   A
Sbjct: 40  IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN-PNVVTYNTLINGLCKAWRIETA 98

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM  K  + P  ++YN LIDGFC+   +  AK + + M  + C PNV  YTTL++
Sbjct: 99  YELFKEMAGKGYV-PTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLID 157

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  K GK+Q A EV D M    + P+   Y+ LI+ FC+  RVDEA +LL++M  +G   
Sbjct: 158 GLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAP 217

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT+NI+L  LCR  K+E+A  +   +     +    +Y  +L   C   +L+ A  L 
Sbjct: 218 TVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLY 277

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             M+ +G  P   T + L   L +AG   +A
Sbjct: 278 AEMIAKGCPPDAITYDTLAWGLTRAGKVHEA 308



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 170/311 (54%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  +++  CK   ++ A   ++EM    +  P+   Y+ ++ GLC+  +  EA  
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIK-PDAFIYNFVLSGLCQEEKVEEARL 65

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LFE+MV K +I P+ +TYN LI+G C+  +++ A ++ + M   G  P   +Y TL++GF
Sbjct: 66  LFEKMV-KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+  L  AK+VFD+M      P+ + YTTLI+   ++G+V  A E+L  M ++G   ++
Sbjct: 125 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 184

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T++ ++ G C+  +++EA  +LE++   GI     +Y I+LN  C+  +LE A +L R 
Sbjct: 185 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG 244

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  R   P   T N LL  LC     + A      ++  G  P++ ++  L   + R  K
Sbjct: 245 MAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGK 304

Query: 500 LLFAFELLDEL 510
           +  A EL++++
Sbjct: 305 VHEAQELMEKM 315



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 152/283 (53%), Gaps = 1/283 (0%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           ++ + P+ +TY  +++ LCK  R  +A+   EEM ++  I PDA  YN ++ G C+  KV
Sbjct: 2   ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRG-IKPDAFIYNFVLSGLCQEEKV 60

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           + A+ + E M     NPNV  Y TL+NG CK  +++ A E+F EM      P  + Y TL
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+ FC+   +  A ++  +M    C  ++VT+  ++ GL + GK++ A  +L+ +   G+
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N A+Y  +++  C+   +++A +LL  M+ +G  P   T N LL  LC+A   EDA  
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              G+ +    P   ++  L+  +C  ++L  A  L  E++ K
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 137/244 (56%), Gaps = 2/244 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ PN   +N LI   CK   +E+A+E+ KEM   +   P  ++Y+TLIDG CK      
Sbjct: 74  RINPNVVTYNTLINGLCKAWRIETAYELFKEM-AGKGYVPTEVSYNTLIDGFCKKKDLVA 132

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++F++MV +   +P+ +TY  LIDG  + GKV  A ++++ M   G  PNV  Y+ L+
Sbjct: 133 AKDVFDKMV-RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 191

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +GFCK  ++ EA ++ ++M    + P  + Y  L+N  CRA ++++A +L + M +R C 
Sbjct: 192 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCH 251

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             +VT+N +L  LC   +++ A  +  ++   G   +  +Y  +     + G++ +A EL
Sbjct: 252 PTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQEL 311

Query: 437 LRLM 440
           +  M
Sbjct: 312 MEKM 315



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 96/172 (55%), Gaps = 2/172 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  LI    K G +++A EVL  M K  ++ PN+ TYS LIDG CK  R  EA +
Sbjct: 147 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT-PNVATYSCLIDGFCKVRRVDEAHK 205

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L E+MV++  I P  +TYN+L++  CR  K++ A K+   M    C+P V  Y TL+   
Sbjct: 206 LLEQMVTQG-IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 264

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           C   +L  A  ++ EM      PD I Y TL     RAG+V EA EL+++MK
Sbjct: 265 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 9/234 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           + A E+F  ++  KG+     +Y T++D   + K   A   V  +M    C  +   +  
Sbjct: 96  ETAYELFKEMA-GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 154

Query: 136 LMKHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           L+   S     +   E+   +    +T   P++   S  ++   +  +VD A   L+   
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVT---PNVATYSCLIDGFCKVRRVDEAHKLLEQMV 211

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
               + P    +NIL+   C+   LE AF++ + M + +  +P ++TY+TL+  LC + +
Sbjct: 212 TQ-GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR-CHPTVVTYNTLLRALCHHKQ 269

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
              A  L+ EM++K    PDA+TY+ L  G  R GKV  A+++ME MK    NP
Sbjct: 270 LDGAHRLYAEMIAKG-CPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 209/423 (49%), Gaps = 4/423 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  T   +++ L +  KF+ V + L +M           +  L+  +    L E
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              E+ + +      KPSL   +  +N L +  +   A+  L     ++ L P+T  +N 
Sbjct: 171 EAFEIMNSMAD-KGLKPSLFTYNAIINGLCKKGRYARAKGIL-IEMLNIGLSPDTTTYNT 228

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   C+R     A E+  EM + Q   P+L+++S+LI    +N    +A+  F +M  K
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLR-QGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM-KK 286

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             ++PD + Y VL+ G+CR G +  A KI + M   GC  +V  Y T++NG CKE  L +
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++FDEM      PD   +TTLI+  C+ G + +AL L   M +R  K DIV +N ++ 
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G C+ G++E+A  + + +    I+ N  +Y I++N  C  G + +A  L  +M+ +G  P
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 466

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N ++   C++G +  A   L  ++  G  P+  S+  L+    R   +  AF  +
Sbjct: 467 TLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWI 526

Query: 508 DEL 510
           +++
Sbjct: 527 NKM 529



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 214/436 (49%), Gaps = 9/436 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI N++++ KG   +  TY  I++ L +  ++     +L +M           +  L+
Sbjct: 172 AFEIMNSMAD-KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                        E+F ++    R+   P L + S+ + +   +  +D A  + +   + 
Sbjct: 231 VESCRRDNFSEAKEIFGEM---LRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR-DMKK 286

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L P+  I+ +L+  +C+ G +  A ++  EM + Q    ++I Y+T+++GLCK     
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE-QGCVLDVIAYNTILNGLCKEKMLT 345

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A +LF+EMV +   LPD  T+  LI G C+ G + +A  +   M      P++  Y TL
Sbjct: 346 DADKLFDEMVERGA-LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTL 404

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++GFCK G++++A E++D M +  + P+ I Y  LIN +C  G V EA  L   M E+G 
Sbjct: 405 IDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGI 464

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           K  +VT N ++ G CR G   +A   L ++   G+  +  SY  ++N   ++  ++KA  
Sbjct: 465 KPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFL 524

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            +  M   G LP   T N ++   C+ G  ++A + L  ++E G  P+  ++  L+    
Sbjct: 525 WINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHV 584

Query: 496 RGRKLLFAFELLDELV 511
               L  AF   DE++
Sbjct: 585 TQDNLNEAFRFHDEML 600



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 209/408 (51%), Gaps = 11/408 (2%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           + E V+A++  M    C  +  +F  L++ +    +  R L    +   I R K  L +I
Sbjct: 29  RVEVVEALVSSMC-GNCGTNNLVFDLLIRTY----VQARKLREGTEAFRILRSKGYLVSI 83

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           + C +LL    ++D  +   +   + +R  ++ N    NI++   CK G  +     L E
Sbjct: 84  NACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSE 143

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M+ + + Y +++TY+TLI   C+ G   EA E+   M  K  + P   TYN +I+G C+ 
Sbjct: 144 MEGNGI-YADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKK 201

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G+  RAK I+  M N G +P+   Y TL+   C+     EAKE+F EM    + PD + +
Sbjct: 202 GRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSF 261

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           ++LI  F R   +D+AL   ++MK+ G   D V + +++ G CR G + EAL + +++  
Sbjct: 262 SSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE 321

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G  L+  +Y  +LN  C++  L  A +L   M+ RG LP + T   L+   C+ G    
Sbjct: 322 QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMT- 380

Query: 468 AAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            A++LFG + +   KP+  ++  L++  C+  ++  A EL D ++ ++
Sbjct: 381 KALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 138/248 (55%), Gaps = 2/248 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F  LI  HC+ G +  A  +   M +  +  P+++ Y+TLIDG CK G   +A E
Sbjct: 361 PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK-PDIVAYNTLIDGFCKVGEMEKASE 419

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L++ M+S+ +I P+ +TY +LI+ +C  G V  A ++ + M   G  P +    T++ G+
Sbjct: 420 LWDGMISR-KIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGY 478

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G   +A E    M    + PD I Y TLIN F R   +D+A   + +M++ G   DI
Sbjct: 479 CRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDI 538

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N+++ G CR+G+++EA  +L K+   GI  ++++Y  ++N    +  L +A      
Sbjct: 539 ITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDE 598

Query: 440 MLCRGFLP 447
           ML RGF P
Sbjct: 599 MLQRGFAP 606



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 181/384 (47%), Gaps = 38/384 (9%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           ++  ++  +N L +  + D  ++FL     +  +  +   +N LI  +C+ G LE AFE+
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGN-GIYADMVTYNTLIGAYCREGLLEEAFEI 175

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGR------------------------------- 253
           +  M    +  P+L TY+ +I+GLCK GR                               
Sbjct: 176 MNSMADKGLK-PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESC 234

Query: 254 ----FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
               F EA E+F EM+ +  ++PD ++++ LI  F R   +D+A      MK  G  P+ 
Sbjct: 235 RRDNFSEAKEIFGEML-RQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDN 293

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             YT LM+G+C+ G + EA ++ DEM       D I Y T++N  C+   + +A +L  E
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 353

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M ERG   D  TF  ++ G C++G + +AL +   +    I  +  +Y  +++  C+ GE
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +EKA EL   M+ R   P++ T   L+   C  G   +A      ++E G KP   +   
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           +++  CR      A E L  ++ K
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAK 497



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 143/303 (47%), Gaps = 5/303 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL+I + + EQ G   +   Y TIL+ L + K     D +  +M           F  L+
Sbjct: 312 ALKIRDEMLEQ-GCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 370

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                     + L +F  +      KP + A +T ++   +  +++ A           +
Sbjct: 371 HGHCQDGNMTKALSLFGTMTQ-RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR-K 428

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   + ILI  +C  G +  AF +   M +  +  P L+T +T+I G C++G   +A
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK-PTLVTCNTVIKGYCRSGDSSKA 487

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E    M++K  + PD ++YN LI+GF R   +D+A   +  M+  G  P++  Y  +MN
Sbjct: 488 DEFLGRMIAKG-VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMN 546

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC++G++QEA+ V  +M    + PD   YT LIN       ++EA     EM +RG   
Sbjct: 547 GFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606

Query: 378 DIV 380
           D V
Sbjct: 607 DDV 609


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 204/403 (50%), Gaps = 11/403 (2%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKF-HEGIFLNLMKH-FSNCSLHERVLEMFHK 155
           ++ +L  +A+ K ++ V ++   M  E C   H+    N++ +    CS     L +  K
Sbjct: 72  FSKLLSNIAKSKNYDLVISLFHNM--EICGIGHDLYTYNIVINCLCRCSRFVIALSVVGK 129

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +     E P +  +S+ +N   + N+V  A + +    + +R K +  I+N +I   CK 
Sbjct: 130 MMKFGYE-PDVVTVSSLINGFCQGNRVFGAVDLVS-KMEEMRCKLDVVIYNTIIDGFCKT 187

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G + +A  +   M++  +   + +TY++L+ GLC +GR  +A  L  +MV +D I+P+ +
Sbjct: 188 GLVNNALVLFGRMERDGVR-ADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRD-IVPNVI 245

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           T+  LI+ F R GK   AKK  E M     +P+VF Y ++++G C  G++ EAK++ D M
Sbjct: 246 TFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLM 305

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PD + Y TLIN FC+  RVDE  +L++EM +RG   D VTFN I+ G  + G+ 
Sbjct: 306 VTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRP 365

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           + A  +  ++   G   N  +Y I+L   C    +EKA+ L   M          T N +
Sbjct: 366 DAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIV 422

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           +  +C  G  EDA      L   G +P+  ++  ++   CR R
Sbjct: 423 IHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKR 465



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 187/381 (49%), Gaps = 7/381 (1%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F  L+ + +    ++ V+ +FH +  I      L   +  +N L   ++  +A + +   
Sbjct: 72  FSKLLSNIAKSKNYDLVISLFHNME-ICGIGHDLYTYNIVINCLCRCSRFVIALSVVG-K 129

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                 +P+    + LI   C+   +  A +++ +M++ +    +++ Y+T+IDG CK G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKL-DVVIYNTIIDGFCKTG 188

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
               A+ LF  M  +D +  D +TYN L+ G C  G+   A ++M  M      PNV  +
Sbjct: 189 LVNNALVLFGRM-ERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITF 247

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L+N F +EGK  EAK+ ++EM    + PD   Y ++I+  C  G+VDEA ++L  M  
Sbjct: 248 TALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVT 307

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +GC  D+VT+N ++ G C+  +++E   ++ ++   G+ ++  ++  ++    Q G  + 
Sbjct: 308 KGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDA 367

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A E+   M   G  P+  T + LL  LC     E A +    + +   + +  ++ +++ 
Sbjct: 368 AQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIH 424

Query: 493 LICRGRKLLFAFELLDELVIK 513
            +C    +  A++L   L  K
Sbjct: 425 GMCMIGNVEDAWDLFCSLSFK 445



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 134/248 (54%), Gaps = 8/248 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAF 222
           P++   +  +N  +   +   A+ F  Y     R + P+   +N +I   C  G ++ A 
Sbjct: 242 PNVITFTALINAFVREGKFLEAKKF--YEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAK 299

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++L ++  ++  +P+++TY+TLI+G CK  R  E  +L  EM S+  ++ D +T+N +I 
Sbjct: 300 QIL-DLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREM-SQRGLVVDTVTFNTIIQ 357

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+ + G+ D A++I   M   G  PN+  Y+ L+ G C   ++++A  +F+ M+   ++ 
Sbjct: 358 GYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMEL 414

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y  +I+  C  G V++A +L   +  +G + D+VT+  ++ G CR+   ++A  + 
Sbjct: 415 DITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLY 474

Query: 403 EKLWYDGI 410
            K+  DG+
Sbjct: 475 RKMQEDGL 482



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 1/258 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EAI+LF  M+ + + LP  + ++ L+    +    D    +   M+  G   +++ Y  +
Sbjct: 52  EAIDLFCNMI-QSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N  C+  +   A  V  +M  F  +PD +  ++LIN FC+  RV  A++L+ +M+E  C
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           K D+V +N I+ G C+ G +  AL +  ++  DG+  +  +Y  ++   C  G    A  
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+R M+ R  +P+  T   L+    + G   +A      ++     P+  ++  ++  +C
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290

Query: 496 RGRKLLFAFELLDELVIK 513
              ++  A ++LD +V K
Sbjct: 291 MHGQVDEAKQILDLMVTK 308



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 10/195 (5%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA ++F  M      P  + ++ L++   ++   D  + L   M+  G   D+ T+NI
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL---LRLML 441
           ++  LCR  +   AL ++ K+   G   +  +   ++N  CQ   +  A++L   +  M 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSW-ALLVELICRGRK 499
           C+  +  Y   N ++   CK G+  + A+ LFG +E  G + ++ ++ +L+  L C GR+
Sbjct: 170 CKLDVVIY---NTIIDGFCKTGLVNN-ALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225

Query: 500 LLFAFELLDELVIKE 514
              A  L+ ++V+++
Sbjct: 226 -SDAARLMRDMVMRD 239


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 170/313 (54%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PNTC  NILI   C    ++  F VL ++ K  +  P +IT++TLI+GLCK G F +A
Sbjct: 122 LSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQ-PTIITFTTLINGLCKAGEFAQA 180

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +ELF++MV++    PD  TY  +I+G C+ G+   A  +++ M   GC P+V  Y+TL++
Sbjct: 181 LELFDDMVARG-CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLID 239

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK+  + EA ++F  MK   + P  + YT+LI   C   R  EA  +L EM       
Sbjct: 240 SLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP 299

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DIVTF++++   C+EG + EA G+L+ +   G+  N  +Y  +++    + E+ +A +L 
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            +M+ RG  P   + + L+   C     ++A      ++  G  P + S+  L+   C+ 
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419

Query: 498 RKLLFAFELLDEL 510
            KL  A EL  ++
Sbjct: 420 GKLREARELFKDM 432



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 206/416 (49%), Gaps = 45/416 (10%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           F  L+          + LE+F  +  + R  +P +   +T +N L +  +   A   +K 
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDM--VARGCQPDVYTYTTIINGLCKMGETAAAAGLIKK 221

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             + +  +P+   ++ LI   CK   +  A ++   MK   +S P +++Y++LI GLC  
Sbjct: 222 MGE-VGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS-PTVVSYTSLIQGLCSF 279

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG----------------------- 288
            R++EA  +  EM S + I+PD +T+++LID FC+ G                       
Sbjct: 280 SRWKEASAMLNEMTSLN-IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVIT 338

Query: 289 ------------KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
                       +V  A+K+ + M   GC P+VF+Y+ L+NG+C   ++ EAK++F+EM 
Sbjct: 339 YNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI 398

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +  L P+T+ YTTLI+ FC+ G++ EA EL K+M   G   D+ T++++L G C++G + 
Sbjct: 399 HQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLG 458

Query: 397 EALGMLEKLWYDGIYL--NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +A  +   +   G YL  N   Y I+++  C+ G L  A +L   +   G  P       
Sbjct: 459 KAFRLFRAM--QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           ++  LCK G+ ++A  A   + E G  P   S+ +++    + +    A +L+ E+
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 572



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 202/411 (49%), Gaps = 55/411 (13%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T  T +D+  + R ++                AL+IF+ + + KG +    +Y ++
Sbjct: 229 PDVVTYSTLIDSLCKDRLVNE---------------ALDIFSYM-KAKGISPTVVSYTSL 272

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           +  L  + +++   A+L +MT           LN+M      SL   ++++F K   +  
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTS----------LNIMPDIVTFSL---LIDIFCKEGNVLE 319

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
            +  LK ++    + +E N +        YS Q + +     +F+++I   CK       
Sbjct: 320 AQGVLKTMT---EMGVEPNVITYNSLMHGYSLQ-MEVVEARKLFDVMITRGCK------- 368

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
                         P++ +YS LI+G C   R  EA +LF EM+ +  + P+ ++Y  LI
Sbjct: 369 --------------PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG-LTPNTVSYTTLI 413

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
             FC+ GK+  A+++ + M  NG  P++  Y+ L+ GFCK+G L +A  +F  M+   LK
Sbjct: 414 HAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLK 473

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ + YT LI+  C++G ++ A +L  E+   G + D+  +  I+ GLC+EG ++EAL  
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEA 533

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
             K+  DG   N+ SY +++    Q  +  +A++L+  M  +GF+    T+
Sbjct: 534 FRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTT 584



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 139/278 (50%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +I ++ L+  + +  ++ +A+    + +    + P+  T N+LI+ FC    VD    
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   G  P +  +TTL+NG CK G+  +A E+FD+M     +PD   YTT+IN  C
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G    A  L+K+M E GC+ D+VT++ ++  LC++  + EAL +   +   GI     
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           SY  ++   C     ++A  +L  M     +P   T + L+   CK G   +A   L  +
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            EMG +P   ++  L+       +++ A +L D ++ +
Sbjct: 328 TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITR 365



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 36/175 (20%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK-LWYDGIYLNKASYR 418
           +D+AL     M  R     I+ FN +L  + R  +  +A+  L K +   G+  N  +  
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 419 IVLN-----------FS------------------------CQKGELEKAIELLRLMLCR 443
           I++N           FS                        C+ GE  +A+EL   M+ R
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           G  P   T   ++  LCK G    AA  +  + E+G +P+  +++ L++ +C+ R
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDR 245


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 199/366 (54%), Gaps = 4/366 (1%)

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           +E V+ +  +I  +  E+  + ++S  +N     ++VD   + L      L L+P+   F
Sbjct: 78  YETVVYLSKEIEFLGIEQ-DIHSLSILINCFCHLHRVDFGLSVLS-KILKLGLEPSIVTF 135

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             L+   C  G ++    +  +M    +  PN+ TY+ +I+ L K+G+  EA+   ++M 
Sbjct: 136 TTLLNGLCMEGKMDQVMMLYDDMLVRGLQ-PNVYTYNVIINSLSKSGKANEALGFLKQM- 193

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K   +P+ + Y+ LIDG+C  G++D A+ + + M + GC PNV+ YT+LMNG+CK  ++
Sbjct: 194 EKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERI 253

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EA ++ DE     L PD + +TT+I+  CRAGR   A +L + +   G   +I+T+ ++
Sbjct: 254 EEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVL 313

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC+ G +EEA  + +++    +  N   Y I+++  C+ G+++   EL   ++  G 
Sbjct: 314 LDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGL 373

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+  T   L+  LCK G+  +A      + E G  P+  ++ ++++   + +    A +
Sbjct: 374 KPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQ 433

Query: 506 LLDELV 511
           L++E+V
Sbjct: 434 LVEEMV 439



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 163/289 (56%), Gaps = 3/289 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++   +  +N L +S + + A  FLK   + +   PN   ++ LI  +C RG ++ A 
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLK-QMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            V  ++  S+   PN+ TY++L++G CK  R  EA++L +E + K  ++PD +T+  +I 
Sbjct: 223 SVF-DLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKG-LVPDIVTFTTIIS 280

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G CR G+   A+++  ++  +G  PN+  Y  L++G CK G L+EA  +F EM+   +KP
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP 340

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + YT LI+  C+ G++ +  EL   + + G K ++ T+  ++G LC+EG I EA  + 
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLF 400

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            K+  DG   +K +Y +++    Q  +   A +L+  M+ RGF    AT
Sbjct: 401 RKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 126/223 (56%), Gaps = 3/223 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  L+  +CK   +E A ++L E  +  +  P+++T++T+I GLC+ GR   A +
Sbjct: 235 PNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGL-VPDIVTFTTIISGLCRAGRPLAAQQ 293

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF  + +     P+ +TY VL+DG C+ G ++ A  + + M+ +   PN+  YT L++  
Sbjct: 294 LFRYICAHGHT-PNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK GK+++ KE+F  + +  LKP+   YT L+   C+ G + EA +L ++M+E GC  D 
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK 412

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
             +N+I+ G  +      A  ++E++   G   + A+ R +LN
Sbjct: 413 CAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT-RALLN 454



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 101/203 (49%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  ++ L +   + G  +    +  E++   ++ D    + LINCFC   RVD  L +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ + G +  IVTF  +L GLC EGK+++ + + + +   G+  N  +Y +++N   +
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+  +A+  L+ M   G +P+    + L+   C  G  ++A      +V  G  P   +
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 487 WALLVELICRGRKLLFAFELLDE 509
           +  L+   C+  ++  A +LLDE
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDE 262


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 224/489 (45%), Gaps = 48/489 (9%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           +H     LI  +K    AL+ F   S    F HN +TY  ++ KL  +++FE V  VL +
Sbjct: 93  THQHIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDE 152

Query: 121 MTYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR--EKPSLKAISTCLNLLI 177
           M         E IF+ +++      +   V +M   +  IT+  E PSLK  ++ L++L+
Sbjct: 153 MPSSIGSPPDESIFVTIVRGLGRARM---VRQMIKVLDLITKFGENPSLKIFNSILDVLV 209

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           + + +DLA+ F +       +  +   F IL+K  C    +  AF++L+ MK S+   PN
Sbjct: 210 KED-IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMK-SRGKTPN 267

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            + Y+T+I  LCKNG+   A  L  EMV      P  +T+NVLI  +C+   + +A  ++
Sbjct: 268 TVIYNTMIHALCKNGKVGRARSLMNEMVE-----PSDVTFNVLISAYCQEENLVQALVLL 322

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           E   + G  P+V   T ++   CK G++ E  EV + +++     D + Y TLI  FC  
Sbjct: 323 EKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCML 382

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G+      +LK+M+ +GC  ++ T+NI+  G C  G ++ A+ +   +  DGI  N  +Y
Sbjct: 383 GKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTY 442

Query: 418 RIVLNFSCQKGELEKAIELLRLM-LCRG-------------------------------- 444
             ++   C  G +E   ++L LM   RG                                
Sbjct: 443 DTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM 502

Query: 445 --FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
               P     +  ++  C  G   DA      +++ G  P    +  L+   C+   +  
Sbjct: 503 EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVRE 562

Query: 503 AFELLDELV 511
           AFEL++E+V
Sbjct: 563 AFELINEMV 571



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 140/268 (52%), Gaps = 14/268 (5%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +NIL   +C  G L+SA ++  +MK   +++ N +TY TLI GLC  GR  +  +
Sbjct: 402 PNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINW-NFMTYDTLIRGLCSGGRMEDGFK 460

Query: 260 LFEEM-----VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNGCNPNVFNYT 313
           + E M      +  +I P    YN +I G  +  + + A   +EF+ K     P   + +
Sbjct: 461 ILELMEESRGGAGGRISP----YNSIIYGLYKKNQFEEA---LEFLTKMEKLFPRAVDRS 513

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
             + GFC EG + +AK V+D+M      P  + Y  LI+ FC+ G V EA EL+ EM + 
Sbjct: 514 LRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDH 573

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G      TFN ++   C +GK+  AL ++E +   G   +  SY  +++  C KG+ +KA
Sbjct: 574 GYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKA 633

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCK 461
           + L   M+ +  LP Y+T N +L+ L +
Sbjct: 634 VRLFLQMVEKDILPDYSTWNSMLLCLTQ 661



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 145/289 (50%), Gaps = 6/289 (2%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +N LIK  C  G  +    VLK+M+  +   PN+ TY+ L  G C +G    AI+L
Sbjct: 368 DVVAYNTLIKGFCMLGKAKVGHRVLKDME-IKGCLPNVDTYNILASGYCDSGMLDSAIDL 426

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN--GCNPNVFNYTTLMNG 318
           F +M   D I  + +TY+ LI G C GG+++   KI+E M+ +  G    +  Y +++ G
Sbjct: 427 FNDM-KTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYG 485

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
             K+ + +EA E   +M+     P  +  +  I  FC  G + +A  +  +M + G    
Sbjct: 486 LYKKNQFEEALEFLTKMEKLF--PRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPS 543

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++ +  ++ G C++G + EA  ++ ++   G +    ++  +++  C +G++  A++L+ 
Sbjct: 544 VLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLME 603

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
            M+ RG LP   + + ++  LC  G  + A      +VE    P+  +W
Sbjct: 604 DMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTW 652



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 144/300 (48%), Gaps = 11/300 (3%)

Query: 219 ESAFEVLKEMKKSQMSYPNLI----TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +SA + L+  + +  + PN I    TY  LI  LC   RF    E+ +EM S     PD 
Sbjct: 105 KSASQALQTFRWAS-NLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDE 163

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF-D 333
             +  ++ G  R   V +  K+++ +   G NP++  + ++++   KE  +  A+E +  
Sbjct: 164 SIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKE-DIDLAREFYRK 222

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           +M    +  D   +  L+   C   R+ +A +LL+ MK RG   + V +N ++  LC+ G
Sbjct: 223 KMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNG 282

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           K+  A  ++ ++    +  +  ++ ++++  CQ+  L +A+ LL      GF+P   T+ 
Sbjct: 283 KVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTAT 338

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +++  LCKAG   +    L  +  MG   +  ++  L++  C   K      +L ++ IK
Sbjct: 339 KVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIK 398



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 8/215 (3%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ P    +N +I    K+   E A E L +M+K    +P  +  S  I G C  G   +
Sbjct: 475 RISP----YNSIIYGLYKKNQFEEALEFLTKMEKL---FPRAVDRSLRILGFCNEGSIGD 527

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  ++++M+ K+  +P  L Y  LI GFC+ G V  A +++  M ++G  P    +  L+
Sbjct: 528 AKRVYDQMI-KEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALI 586

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           + FC +GK+  A ++ ++M      PD   Y+ +++  C  G   +A+ L  +M E+   
Sbjct: 587 SAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDIL 646

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
            D  T+N +L  L +E    E   +      DG Y
Sbjct: 647 PDYSTWNSMLLCLTQETVWLEGDNLFHLQLQDGKY 681


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 217/437 (49%), Gaps = 42/437 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  N  TY T+++ L +     A   +LR M    C+          
Sbjct: 156 ALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ---------- 204

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHL 196
                                     P +   ++ ++ L +  QV  A N F K   Q  
Sbjct: 205 --------------------------PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ-- 236

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+   +  LI   C     +    +L +M  S++  P+++ +ST++D LCK G+  E
Sbjct: 237 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI-MPDVVIFSTVVDALCKEGKITE 295

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++ + M+ +  + P+ +TYN L+DG C   ++D A K+ + M +NG  PNV +Y TL+
Sbjct: 296 AHDVVDMMIIRG-VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK  ++ +A  +F+EM    L P+T+ Y TL++  C  GR+ +A+ L  EM   G  
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI 414

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+ T+ I+L  LC++  ++EA+ +L+ +    +  +   Y IV++  C+ GELE A ++
Sbjct: 415 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +  +G  P+  T   ++  LC+ G+ ++A      +   G  P+  ++  + + + +
Sbjct: 475 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534

Query: 497 GRKLLFAFELLDELVIK 513
            ++ L A +LL E++ +
Sbjct: 535 NKEALRAIQLLQEMLAR 551



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 153/320 (47%), Gaps = 2/320 (0%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H+   P+T  FN L+    K     + F +  +M    +  P++ T + LI+  C   R 
Sbjct: 60  HMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIP-PDVYTLNILINSFCHLNRP 118

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A  +  +++ K  + PD  T+  LI G C  GK+  A  + + M   G  PNV  Y T
Sbjct: 119 GFAFSVLAKIL-KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 177

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK G    A  +   M+    +PD + YT++I+  C+  +V EA  L  +M  +G
Sbjct: 178 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 237

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI T+  ++  LC   + +    +L ++    I  +   +  V++  C++G++ +A 
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 297

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +++ +M+ RG  P+  T N L+   C     ++A      +V  G+ P   S+  L+   
Sbjct: 298 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 357

Query: 495 CRGRKLLFAFELLDELVIKE 514
           C+ +++  A  L +E+  KE
Sbjct: 358 CKIQRMDKATYLFEEMCQKE 377



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 2/188 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F+ M +    P T+ +  L+    +  +      L  +M   G   D+ T NI
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   +   A  +L K+   G+  + A++  ++   C +G++  A+ L   M+  G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLFA 503
           F P+  T   L+  LCK G   +AAI L   +E G  +P+   +  +++ +C+ R++  A
Sbjct: 168 FQPNVVTYGTLINGLCKVG-NTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226

Query: 504 FELLDELV 511
           F L  ++V
Sbjct: 227 FNLFSKMV 234


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 217/449 (48%), Gaps = 35/449 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TY---- 123
           A E+ N++S  KG      TY  +++ L +  ++     V  +M          TY    
Sbjct: 239 AFEVMNSMS-GKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL 297

Query: 124 -ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
            E+C+ +   FL     FS+  LH  V              P L + S+ + +   +  +
Sbjct: 298 VESCRNNN--FLEAKDIFSDM-LHRGV-------------SPDLISFSSLIGVSSRNGHL 341

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           D A  + +   +   L P+  I+ ILI  +C+ G +  A E+  +M + Q    +++ Y+
Sbjct: 342 DQALMYFR-DMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLE-QGCALDVVAYN 399

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           T+++GLCK     +A  LF+EMV +  ++PD  T+  LI G C+ G + +A  +   M  
Sbjct: 400 TILNGLCKKKLLADANALFDEMVERG-VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQ 458

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
               P++  Y  L++GFCK  ++++A E+++EM +  + P+ I Y  L+N +C  G V E
Sbjct: 459 KNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSE 518

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  L  EM  +G K  +VT N ++ G CR G + +A   L K+  +G+  +  +Y  ++N
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
              +   ++KA  L+  M  +G  P   T N +L   C+ G  ++A + L  ++E G  P
Sbjct: 579 GFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDP 638

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELV 511
           +  ++  L+        L  AF   DE++
Sbjct: 639 DRSTYTTLINGYVSQDNLKEAFRFHDEML 667



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 241/479 (50%), Gaps = 22/479 (4%)

Query: 45  ETSDTCVDARKRSRFISHGAAISLIKCEKE---PQCALEIFNTVSEQKGFNHNNATYATI 101
           E +DT    R++   +S  A  SL+    +      A E++N ++ + G   N  T   +
Sbjct: 133 EGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA-RSGIELNVYTLNIM 191

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS--NCSLHERVL-EMFHKIHP 158
           ++ L +  K + V   L  M        +GIF +++ + +  N    E +L E F  ++ 
Sbjct: 192 VNALCKDHKIDDVKPFLIDME------QKGIFADIVTYNTLINAYCREGLLGEAFEVMNS 245

Query: 159 ITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCK 214
           ++ +  KP+L   +  +N L +  +   A+      N+ L   L P+T  +N L+   C+
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVF---NEMLSIGLSPDTTTYNTLLVESCR 302

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
                 A ++  +M    +S P+LI++S+LI    +NG   +A+  F +M +   ++PD 
Sbjct: 303 NNNFLEAKDIFSDMLHRGVS-PDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG-LVPDN 360

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           + Y +LI+G+CR G +  A +I + M   GC  +V  Y T++NG CK+  L +A  +FDE
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDE 420

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M    + PD   +TTLI+  C+ G + +AL L   M ++  K DIVT+NI++ G C+  +
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +E+A  +  ++    I+ N  SY I++N  C  G + +A  L   M+ +G  P   T N 
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++   C++G    A   L  ++  G  P+S ++  L+    +G  +  AF L++++  K
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETK 599



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 147/248 (59%), Gaps = 2/248 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+ C F  LI  HCK G +  A  +   M +  +  P+++TY+ LIDG CK     +A E
Sbjct: 428 PDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIK-PDIVTYNILIDGFCKTTEMEKANE 486

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+ EM+S+ +I P+ ++Y +L++G+C  G V  A ++ + M   G  P +    T++ G+
Sbjct: 487 LWNEMISR-KIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGY 545

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G L +A E   +M +  + PD+I Y TLIN F +   +D+A  L+ +M+ +G + D+
Sbjct: 546 CRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDV 605

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N+IL G CR+G+++EA  +L K+   GI  ++++Y  ++N    +  L++A      
Sbjct: 606 VTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDE 665

Query: 440 MLCRGFLP 447
           ML RGF+P
Sbjct: 666 MLQRGFVP 673



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 212/411 (51%), Gaps = 18/411 (4%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           + E V++++   +  TC     +F  L++ +    +  R L        I R K  L +I
Sbjct: 97  RVEIVESLISMSS--TCGVDNLVFDLLIRSY----VQARKLNEGTDTFKILRRKGFLVSI 150

Query: 170 STCLNLL---IESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEV 224
           + C +LL   ++   VDLA    +  N+  R  ++ N    NI++   CK   ++     
Sbjct: 151 NACNSLLGGLVKMGWVDLA---WEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPF 207

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
           L +M++  + + +++TY+TLI+  C+ G   EA E+   M  K  + P   TYN +I+G 
Sbjct: 208 LIDMEQKGI-FADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG-LKPTLFTYNAVINGL 265

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+  RAK +   M + G +P+   Y TL+   C+     EAK++F +M +  + PD 
Sbjct: 266 CKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDL 325

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I +++LI    R G +D+AL   ++MK  G   D V + I++ G CR G + EAL + +K
Sbjct: 326 ISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDK 385

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G  L+  +Y  +LN  C+K  L  A  L   M+ RG +P + T   L+   CK G 
Sbjct: 386 MLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGN 445

Query: 465 AEDAAIALFGLV-EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
               A++LFG++ +   KP+  ++ +L++  C+  ++  A EL +E++ ++
Sbjct: 446 M-GKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 177/384 (46%), Gaps = 38/384 (9%)

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            ++  +N L + +++D  + FL    Q   +  +   +N LI  +C+ G L  AFEV+  
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDMEQK-GIFADIVTYNTLINAYCREGLLGEAFEVMNS 245

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M    +  P L TY+ +I+GLCK GR+  A  +F EM+S   + PD  TYN L+   CR 
Sbjct: 246 MSGKGLK-PTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG-LSPDTTTYNTLLVESCRN 303

Query: 288 -----------------------------------GKVDRAKKIMEFMKNNGCNPNVFNY 312
                                              G +D+A      MK +G  P+   Y
Sbjct: 304 NNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIY 363

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L+NG+C+ G + EA E+ D+M       D + Y T++N  C+   + +A  L  EM E
Sbjct: 364 TILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE 423

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           RG   D  TF  ++ G C+EG + +AL +   +    I  +  +Y I+++  C+  E+EK
Sbjct: 424 RGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEK 483

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A EL   M+ R   P++ +   L+   C  G   +A      ++  G KP   +   +++
Sbjct: 484 ANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIK 543

Query: 493 LICRGRKLLFAFELLDELVIKESG 516
             CR   L  A E L +++ +  G
Sbjct: 544 GYCRSGDLSKADEFLGKMISEGVG 567



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 150/301 (49%), Gaps = 5/301 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALEI + + EQ G   +   Y TIL+ L + K     +A+  +M           F  L+
Sbjct: 379 ALEIRDKMLEQ-GCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLI 437

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                     + L +F  I      KP +   +  ++   ++ +++ A N L       +
Sbjct: 438 HGHCKEGNMGKALSLF-GIMTQKNIKPDIVTYNILIDGFCKTTEMEKA-NELWNEMISRK 495

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   + IL+  +C  G +  AF +  EM +  +  P L+T +T+I G C++G   +A
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIK-PTLVTCNTVIKGYCRSGDLSKA 554

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E   +M+S + + PD++TYN LI+GF +G  +D+A  ++  M+  G  P+V  Y  ++N
Sbjct: 555 DEFLGKMIS-EGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILN 613

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC++G++QEA+ +  +M    + PD   YTTLIN +     + EA     EM +RG   
Sbjct: 614 GFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673

Query: 378 D 378
           D
Sbjct: 674 D 674


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 226/487 (46%), Gaps = 87/487 (17%)

Query: 69  IKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF 128
           ++ +K P  AL+ F    +QK + HN   Y + +D LA     + V +V        CKF
Sbjct: 71  MELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVF-------CKF 123

Query: 129 HEGIFL-------NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
               FL       +L+K F +  + E +L ++  +     E PSL   +  LN L+ S  
Sbjct: 124 RGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVE-PSLFTYNFLLNGLVNSVF 182

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           ++ A+  L+   ++ ++ P+   +N +IK +C+ G  + AFE  ++M+   ++ P+ ITY
Sbjct: 183 IESAERVLEVM-ENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVA-PDKITY 240

Query: 242 STLID-----------------------------------GLCKNGRFREAIELFEEMVS 266
            TLI                                    GLCK G+  E   +FE+M+ 
Sbjct: 241 MTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQ 300

Query: 267 ----------------------------------KDQILPDALTYNVLIDGFCRGGKVDR 292
                                             K+ + PD +TY V+++  C+ G++D 
Sbjct: 301 KGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDE 360

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A + +EF + NG   N   Y++L++G  K G++ EA+++F+EM      PD+  Y  LI+
Sbjct: 361 AMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALID 420

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              + G+ DEAL   K M++ GC   + T+ I++ GL RE K EEAL M + +   GI  
Sbjct: 421 ALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITP 480

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
             A++R +    C  G++ +A +LL  +   G +P  A  + L V LCKAG  ++A    
Sbjct: 481 TAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETAFEDMLNV-LCKAGRIKEACKLA 539

Query: 473 FGLVEMG 479
            G V+ G
Sbjct: 540 DGFVDRG 546



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 41/263 (15%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   + +++   CK G L+ A E L+  + + ++  N + YS+LIDGL K GR  EA
Sbjct: 338 LEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAV-NAMLYSSLIDGLGKAGRVHEA 396

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LFEEMV K    PD+  YN LID   + GK D A    + M++ GC+  V+ YT ++N
Sbjct: 397 EKLFEEMVKKG-CPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMIN 455

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL--------------------------- 350
           G  +E K +EA +++D M +  + P    +  L                           
Sbjct: 456 GLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIP 515

Query: 351 -------INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
                  +N  C+AGR+ EA +L     +RG +       +++  L + G  + AL ++ 
Sbjct: 516 ETAFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMH 575

Query: 404 K---LWYD--GIYLNKASYRIVL 421
               + YD  G    +  +RI++
Sbjct: 576 SKIGIGYDRMGSVKRRVKFRILV 598


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 210/442 (47%), Gaps = 7/442 (1%)

Query: 73  KEPQC---ALEIFNTVSEQKG-FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF 128
           + P C   A E F+ ++   G    ++ ++  ++    R  +FE  DA+L  M  +    
Sbjct: 155 RHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCL 214

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
                  +++ F        V ++F ++  +    P++   S  ++ L E   V  A + 
Sbjct: 215 DSATCTVVVRAFCRQGRFRNVTDLFRRMSEMG-TPPNMVNYSAWIDGLCERGYVKQAFHV 273

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+       LKPN      LI   CK G +E AF +  ++ KS    PN+ TY+ +I G 
Sbjct: 274 LE-EMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGY 332

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           CK G+   A  L   MV +  + P+  TY  LI G C+GG  DRA ++M  MK  G  PN
Sbjct: 333 CKEGKLARAEMLLGRMVEQG-LAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPN 391

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           ++ Y  ++ GFCK+GK+QEA +V     +  L  D + YT LI   C+ G +  AL+L K
Sbjct: 392 IYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFK 451

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           +M E+ C  DI T+  I+   C++ ++E++  + +K    G+   K +Y  ++   C+ G
Sbjct: 452 QMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLG 511

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           +L  A+++   M+  G LP   T   L+  LCK    E+A      +++    P   +  
Sbjct: 512 KLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRV 571

Query: 489 LLVELICRGRKLLFAFELLDEL 510
            L    CR  K+  A   LD L
Sbjct: 572 TLAYEYCRRDKITIAVSFLDRL 593



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 168/415 (40%), Gaps = 76/415 (18%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           ++F  +SE  G   N   Y+  +D L      +    VL +M  +  K +     +L+  
Sbjct: 237 DLFRRMSEM-GTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
                  ER   +F K+   +  KP++   +  +    +  ++  A+  L    +   L 
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ-GLA 354

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE--- 256
           PNT  +  LI  HCK G+ + AFE++ +MK      PN+ TY+ +I G CK G+ +E   
Sbjct: 355 PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGF-LPNIYTYNAIIGGFCKKGKIQEAYK 413

Query: 257 --------------------------------AIELFEEMVSKD---------------- 268
                                           A++LF++M  K                 
Sbjct: 414 VLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYC 473

Query: 269 ------------------QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
                              ++P   TY  +I G+CR GK+  A K+ E M  +GC P+  
Sbjct: 474 QQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSI 533

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y  L++  CKE +L+EA+ +F+ M +  L P  +   TL   +CR  ++  A+  L  +
Sbjct: 534 TYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRL 593

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
            +R       T + ++  L   G ++ A   L+ +      ++ A+Y   +N SC
Sbjct: 594 DKR---QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFIN-SC 644



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 11/200 (5%)

Query: 323 GKLQEAKEVFDEMKN--FLLKPDTIGYTTLIN-----CFCRAGRVDEALELLKEMKERGC 375
           G+L+EA ++  E+++    L  +T  +   +      CF  A    EA + +      G 
Sbjct: 122 GRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHA---REAFDGMARAAG-GV 177

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D  +F  ++ G CREG+ EEA  +L  +W  G  L+ A+  +V+   C++G      +
Sbjct: 178 RPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD 237

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L R M   G  P+    +  +  LC+ G  + A   L  +V  G KP   +   L++ +C
Sbjct: 238 LFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 496 RGRKLLFAFELLDELVIKES 515
           +   +  AF L  +LV   S
Sbjct: 298 KIGWMERAFRLFLKLVKSSS 317


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 224/438 (51%), Gaps = 36/438 (8%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G + +  TY +++    + K  ++   V ++M  + C+ +E  + +L+         +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 148 RVLEMFHKI-----HPITREKPSL-KAI------STCLNLLIESNQVDLAQNFLKYS--- 192
             +++F K+     +P  R    L KA+      S  LNL+ E  +  +  N   Y+   
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 193 ----------------NQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
                            Q L   L PN   +N LI  +CKRG +E A +V+ E+ +S+  
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVV-ELMESRNL 424

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN  TY+ LI G CK     +A+ +  +M+ + ++LPD +TYN LIDG CR G  D A 
Sbjct: 425 RPNTRTYNELIKGYCKRN-VHKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +++  M + G  P+ + YT++++  CK  +++EA ++FD ++   + P+ + YT LI+ +
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+AG+V+EA  +L++M  + C  + +TFN ++ GLC +GK++EA  + EK+    +    
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           ++  I+++   + G+ + A    + ML  G  P   T    +   C+ G  +DA   +  
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 475 LVEMGFKPESDSWALLVE 492
           + E G  P+  +++ L++
Sbjct: 663 MKENGVSPDLFTYSSLIK 680



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 228/479 (47%), Gaps = 30/479 (6%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD--------------KL 105
           IS     SL   + +P+ AL   + +S+   + H+  +YA++L               +L
Sbjct: 88  ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRL 147

Query: 106 ARYKKFEAVDAVL------RQMTYETC-----KFHEGIFLNLMKHFSNCSLHERVLEMFH 154
              K  ++V   L      R+M  +       K   G +  L+   +   L + + +++ 
Sbjct: 148 LMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
           ++    +  P++   +  +N   +   V+ A  ++    +   L P+   +  LI  +C+
Sbjct: 208 EMLE-DKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVE-AGLDPDFFTYTSLIMGYCQ 265

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           R  L+SAF+V KEM        N + Y+ LI GLC   R  EA++LF +M   D   P  
Sbjct: 266 RKDLDSAFKVFKEMPLKGCRR-NEVAYTHLIHGLCVERRIDEAMDLFVKM-KDDDCYPTV 323

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            TY VLI   C   +   A  +++ M+  G  PN+  YT L++  C + KL++A+E+  +
Sbjct: 324 RTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQ 383

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M    L P+ I Y  LIN +C+ G +++AL++++ M+ R  + +  T+N ++ G C+   
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN- 442

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           + +A+G+L K+    +  +  +Y  +++  C+ G  + A  LL LM  RG +P   T   
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTS 502

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++  LCK+   E+A      L +    P    +  L++  C+  K+  A  +L++++ K
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 205/449 (45%), Gaps = 27/449 (6%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+KG   N  TY  ++D L    K E    +L QM  +    +   +  L+  +    + 
Sbjct: 350 EEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCI 204
           E  L++   +     E  +L+  +   N LI+          +   N+ L  K  P+   
Sbjct: 410 EDALDVVELM-----ESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVT 464

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   C+ G  +SA+ +L  M    +  P+  TY+++ID LCK+ R  EA +LF+ +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGL-VPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             KD ++P+ + Y  LIDG+C+ GKV+ A  ++E M +  C PN   +  L++G C +GK
Sbjct: 524 EQKD-VIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGK 582

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+EA  + ++M    L+P     T LI+   + G  D A    ++M   G K D  T+  
Sbjct: 583 LKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTT 642

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            +   CREG++++A  M+ K+  +G+  +  +Y  ++      G    A  +L+ M   G
Sbjct: 643 FIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTG 702

Query: 445 FLPHYATSNELLVRL-------CKAG----------MAEDAAIALF-GLVEMGFKPESDS 486
             P   T   L+  L        K G          M  D  + L   +VE G  P + S
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKS 762

Query: 487 WALLVELICRGRKLLFAFELLDELVIKES 515
           +  L+  IC    L  A ++ D +  KE 
Sbjct: 763 YEKLMLGICEIGNLRVAEKVFDHMQQKEG 791



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 226/534 (42%), Gaps = 101/534 (18%)

Query: 76  QCALEIFNTVSEQ---KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           QC LE    +  Q   KG   N  TY  +++   +    E    V+  M     + +   
Sbjct: 371 QCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRT 430

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREK-PSLKAISTCLNLLIESNQVDLAQNFLKY 191
           +  L+K +   ++H + + + +K+  + R+  P +   ++ ++    S   D A   L  
Sbjct: 431 YNELIKGYCKRNVH-KAMGVLNKM--LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            N    L P+   +  +I   CK   +E A ++   +++  +  PN++ Y+ LIDG CK 
Sbjct: 488 MNDR-GLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDV-IPNVVMYTALIDGYCKA 545

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV--------------------- 290
           G+  EA  + E+M+SK+  LP++LT+N LI G C  GK+                     
Sbjct: 546 GKVNEAHLMLEKMLSKN-CLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVST 604

Query: 291 --------------DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
                         D A +  + M ++G  P+   YTT +  +C+EG+LQ+A+++  +MK
Sbjct: 605 DTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMK 664

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG--------- 387
              + PD   Y++LI  +   GR + A  +LK M + GC+    TF  ++          
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGK 724

Query: 388 ------GLCREGKIEE---ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE------- 431
                 G+C    + E    + +LEK+   G+  N  SY  ++   C+ G L        
Sbjct: 725 VKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFD 784

Query: 432 -----------------------------KAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
                                        +A +++  M+C G LP   +   L+ RL K 
Sbjct: 785 HMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKK 844

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           G  E        L++ G+  +  +W ++++ + +   +   +EL +  V++++G
Sbjct: 845 GEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFN--VMEKNG 896



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 191/410 (46%), Gaps = 58/410 (14%)

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL------AQNFLKYSNQHLR 197
           S+  R+  +  K  P   + PSLK++   ++    S+   L      A NF  + +Q+ R
Sbjct: 61  SVPHRLFSILSK--PNWHKCPSLKSMVPAISPSHVSSLFSLDLDPKTALNFSHWISQNPR 118

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            K +   +  L+      G +   F++   M KS  S    +  +  +  LC+     E+
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDS----VADTLFVLDLCRKMNKDES 174

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI-MEFMKNNGCNPNVFNYTTLM 316
            EL  +++           YN L++   R G VD  K++ ME +++  C PN++ Y  ++
Sbjct: 175 FELKYKLIIG--------CYNTLLNSLARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMV 225

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK G ++EA +    +    L PD   YT+LI  +C+   +D A ++ KEM  +GC+
Sbjct: 226 NGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCR 285

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYD---------------------------- 408
            + V +  ++ GLC E +I+EA+ +  K+  D                            
Sbjct: 286 RNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNL 345

Query: 409 -------GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
                  GI  N  +Y ++++  C + +LEKA ELL  ML +G +P+  T N L+   CK
Sbjct: 346 VKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCK 405

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            GM EDA   +  +     +P + ++  L++  C+ R +  A  +L++++
Sbjct: 406 RGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKML 454



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/299 (20%), Positives = 129/299 (43%), Gaps = 20/299 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY T +    R  + +  + ++ +M           + +L+K + +       
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSA 691

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
             +  ++H    E PS     + +  L+E          +KY       +P  C+ + ++
Sbjct: 692 FVVLKRMHDTGCE-PSQHTFLSLIKHLLE----------MKYGKVKGG-EPGVCVMSNMM 739

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
           +        +   E+L++M +  ++ PN  +Y  L+ G+C+ G  R A ++F+ M  K+ 
Sbjct: 740 E-------FDIVVELLEKMVEHGVT-PNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEG 791

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P  L +N L+   C+  K + A K+++ M   G  P + +   L+    K+G+ +   
Sbjct: 792 ISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGT 851

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            VF  +       D + +  +I+   + G V+   EL   M++ GC     T+++++ G
Sbjct: 852 SVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 176/314 (56%), Gaps = 8/314 (2%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   FN LI  +C+   ++ A ++  +M     +  ++++Y+TLI+GLC+ GR  EA+
Sbjct: 7   RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFA-QDVVSYATLIEGLCEAGRIDEAV 65

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ELF EM   DQ  PD   Y  L+ G C   + +    ++  MK  G  P+   Y  +++ 
Sbjct: 66  ELFGEM---DQ--PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+E K +EA+E+  EM    L P  +  T +IN +C+ GR+ +AL +L+ MK RGCK +
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + T+N ++ G C EGK+ +A+ +L K+   G+  +  +Y +++   C  G +E A  LLR
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRG 497
           LM   G +    T N L+  LCK G   D A +LF  +E  G KP + ++  L+  +C+ 
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRT-DQACSLFDSLETRGIKPNAVTFNSLINGLCKS 299

Query: 498 RKLLFAFELLDELV 511
            K   A++ L+++V
Sbjct: 300 GKADIAWKFLEKMV 313



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 182/361 (50%), Gaps = 8/361 (2%)

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
           ++F K+ P+      + + +T +  L E+ ++D A       +Q     P+  ++  L+K
Sbjct: 31  DLFDKM-PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMYAALVK 84

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             C     E    +L+ MK+     P+   Y+ ++D  C+  + +EA E+ +EM  K  +
Sbjct: 85  GLCNAERGEEGLLMLRRMKELGWR-PSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG-L 142

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            P  +T   +I+ +C+ G++  A +++E MK  GC PNV+ Y  L+ GFC EGK+ +A  
Sbjct: 143 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 202

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + ++M+   + PD + Y  LI   C  G ++ A  LL+ M+  G  AD  T+N ++  LC
Sbjct: 203 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 262

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           ++G+ ++A  + + L   GI  N  ++  ++N  C+ G+ + A + L  M+  G  P   
Sbjct: 263 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 322

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T +  +  LCK   +++    +  +++   KP + ++ +++  + + R          E+
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382

Query: 511 V 511
           V
Sbjct: 383 V 383



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 210/477 (44%), Gaps = 62/477 (12%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQM---TYETCKFHEGIFLNLMKHFSNCSLH 146
           G+  +   YA ++D   R +K +  + +L++M       C       +N        S  
Sbjct: 106 GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 165

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            RVLE+      +   KP++   +  +       +V  A   L    +   + P+   +N
Sbjct: 166 LRVLELMK----LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN-KMRACGVNPDAVTYN 220

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +LI+  C  G +ESAF +L+ M+   +   +  TY+ LI+ LCK+GR  +A  LF+ + +
Sbjct: 221 LLIRGQCIDGHIESAFRLLRLMEGDGL-IADQYTYNALINALCKDGRTDQACSLFDSLET 279

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I P+A+T+N LI+G C+ GK D A K +E M + GC P+ + Y++ +   CK    Q
Sbjct: 280 RG-IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQ 338

Query: 327 EAKEVFDEM----------------------KNFLL-------------KPDTIGYTTLI 351
           E      EM                      +N+ L              PD + YTT +
Sbjct: 339 EGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSM 398

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             +C  GR++EA  +L EM + G   D + +N ++ G    G+ + A+ +L+++      
Sbjct: 399 RAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV 458

Query: 412 LNKASYRIVLNFSCQKGELE-----------KAIE------LLRLMLCRGFLPHYATSNE 454
            N+ +Y I+L    +   +E           KAIE      L  +M    FLP+  T + 
Sbjct: 459 PNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSS 518

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +L    + G  E+A   +  + E       D +  LV   C+ ++ L A+ L+  ++
Sbjct: 519 ILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMI 575



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 4/211 (1%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M  +G  P+ + + +L+ G+C+  ++  A+++FD+M       D + Y TLI   C AGR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +DEA+EL  EM +     D+  +  ++ GLC   + EE L ML ++   G   +  +Y  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V++F C++ + ++A E+L+ M  +G  P   T   ++   CK G   DA   L  +   G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
            KP   ++  LV+  C   K+  A  LL+++
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 207



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 53/381 (13%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP+    ++ +N L +S + D+A  FL+         P+T  ++  I+H CK    +   
Sbjct: 283 KPNAVTFNSLINGLCKSGKADIAWKFLE-KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341

Query: 223 EVLKEM-----KKSQMSY-----------------------------PNLITYSTLIDGL 248
             + EM     K S ++Y                             P+++TY+T +   
Sbjct: 342 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 401

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C  GR  EA  +  EM SK+ +  D + YN L+DG    G+ D A  I++ M +    PN
Sbjct: 402 CIEGRLNEAENVLMEM-SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 460

Query: 309 VFNYTTLMN-----------------GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            F Y  L+                  G  K  +L +   +FD MK     P++  Y++++
Sbjct: 461 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 520

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             F   GR +EA  L+  MKE     +   +  ++   C+  +  +A  ++  +   G  
Sbjct: 521 EGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFI 580

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
               SY+ +L+    +G+ +KA E+      + + P       ++  L K G ++ +   
Sbjct: 581 PQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREM 640

Query: 472 LFGLVEMGFKPESDSWALLVE 492
           +  L  M  +P   ++A+L E
Sbjct: 641 IIMLERMNCRPSHQTYAMLTE 661



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/381 (21%), Positives = 162/381 (42%), Gaps = 56/381 (14%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F+++ E +G   N  T+ ++++ L +  K +     L +M    C      + + +
Sbjct: 270 ACSLFDSL-ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 328

Query: 138 KHFSNCSLHERVL----EMFHK------------IHPITREK------------------ 163
           +H       +  L    EM  K            IH + +E+                  
Sbjct: 329 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 388

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +T +       +++ A+N L   +++  +  +T  +N L+  H   G  + A  
Sbjct: 389 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN-GVTVDTMAYNTLMDGHASIGQTDHAVS 447

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCK-----------NGRFREAIELFE-----EMVSK 267
           +LK+M  S  S PN  TY  L+  L +                +AIEL +     +++ K
Sbjct: 448 ILKQMT-SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 506

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           ++ LP++ TY+ +++GF   G+ + A  ++  MK +  + N   YT L+  FCK  +  +
Sbjct: 507 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 566

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +   M      P  + Y  L++     G+ D+A E+    + +    D + + +I+ 
Sbjct: 567 AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 626

Query: 388 GLCREGKIE---EALGMLEKL 405
           GL ++G  +   E + MLE++
Sbjct: 627 GLIKKGHSDISREMIIMLERM 647


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 222/459 (48%), Gaps = 41/459 (8%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           I +++  K P+ A  +F   + Q+ F H   TY   L+ L +         +   M Y+ 
Sbjct: 8   IHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKE 67

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
           C  +   +  +++   + +  +  LE+   +       P+   ++  ++ L ++ +VD A
Sbjct: 68  CLPNIYTYGIVLRGLCDDAKTDAALELLQDMES-KMLTPTTFIVNMLVSCLCKNGKVDAA 126

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
               K  +    L  +   +N+L    CK   ++ A  V  EM+++ +  P+L+TY+ L+
Sbjct: 127 YELYKRLSDECSL--DRISYNMLTYGLCKADQIDRALAVFGEMEENAVV-PSLLTYNGLL 183

Query: 246 DGLCKNGRFREAIELFEEMVSKDQ---ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            G C+ GR  +A+ L EEM+   +   ++PD  +YN +I GFC+  ++  A+ ++  M  
Sbjct: 184 YGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIK 243

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +GC+PNV  + TL++G C  GKL EA  +F+ M     +P  + YT LI    RA R+D+
Sbjct: 244 SGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDK 303

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A +   +M  RG + ++ T+  ++GGLC   K+E+AL +L+++   G   N  +Y  V+ 
Sbjct: 304 ANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIG 363

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+ G++E+A +L               ++ +  R  K                   KP
Sbjct: 364 ALCKGGQIERATKLF--------------NDAMGSRTAKC------------------KP 391

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           +S +++ +V  +CR  K L A+E    +V  ES  +  P
Sbjct: 392 DSYAYSTIVYWLCRQSKFLEAYEYFLRMV--ESKLVAKP 428



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 38/227 (16%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N +I   CK   L +A  VL+ M KS  S PN++T++TL+DGLC  G+  EA  
Sbjct: 213 PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCS-PNVVTFNTLLDGLCLTGKLDEANA 271

Query: 260 LFEEMVSKD----------------------------------QILPDALTYNVLIDGFC 285
           +FE MV ++                                   + P+  TY  LI G C
Sbjct: 272 MFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLC 331

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKP 342
              KV+ A +I++ M + G  PNV  YT ++   CK G+++ A ++F++    +    KP
Sbjct: 332 DANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKP 391

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           D+  Y+T++   CR  +  EA E    M E    A    +  +  GL
Sbjct: 392 DSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/321 (34%), Positives = 180/321 (56%), Gaps = 5/321 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN   +N L+    K G  + A  +L EM+ +    P++ TY+ LI  L K GR  EA 
Sbjct: 76  KPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG-CVPDVRTYNCLISTLGKAGRLSEAF 134

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            LF EM  +  + PD  TYN LI G  + G+  +A +++E M+ +GC P+V  Y++L+ G
Sbjct: 135 TLFAEMRERGCV-PDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITG 193

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
             K+G+  +A ++F EMK    KPD+I +T L++   +AGRVD+ALELL EMKERG K  
Sbjct: 194 LGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPG 253

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VT+N ++ G  + G + EA  +L+++  +G   +  +Y  ++    +  +L++A ++L+
Sbjct: 254 VVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLK 313

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M   G  P   T N L+  L KAG+  DA      +   G  P+  +++ L+  + +  
Sbjct: 314 KMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAA 373

Query: 499 KLLFAFELLDELVIKESGTIQ 519
           ++  A  L +E+   ES  IQ
Sbjct: 374 RVESACVLFEEM---ESVGIQ 391



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 213/428 (49%), Gaps = 15/428 (3%)

Query: 89  KGF-NHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           KGF + N  TY ++L+ LA+  + E    +  ++           +  L+         E
Sbjct: 2   KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI--- 204
             LE+  ++      KP+L   +T ++ L ++ Q D A   L        ++ N C+   
Sbjct: 62  AALEVVAEMQA-KGCKPNLWTYNTLVDCLGKAGQFDEALRLLA------EMRDNGCVPDV 114

Query: 205 --FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N LI    K G L  AF +  EM++ +   P+  TY++LI GL K GR ++A+EL E
Sbjct: 115 RTYNCLISTLGKAGRLSEAFTLFAEMRE-RGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM  +    PD +TY+ LI G  + G+  +A K+ + MK  G  P+   +T LM+   K 
Sbjct: 174 EM-ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKA 232

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G++ +A E+ DEMK   +KP  + Y  LI  F + G + EA  LL EMK  GCK D+VT+
Sbjct: 233 GRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTY 292

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           + ++ GL +  +++EA  +L+K+  +G   +  +Y  ++N   + G L  A  L   M  
Sbjct: 293 SCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKS 352

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G  P   T + L+  L KA   E A +    +  +G +P+  ++  ++ ++ +  ++  
Sbjct: 353 KGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDD 412

Query: 503 AFELLDEL 510
           A  L  E+
Sbjct: 413 ADRLFSEM 420



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 220/467 (47%), Gaps = 39/467 (8%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E F   +E  ++G   +  TY +++  L +  + +    +L +M    C      + +L+
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                     +  ++F ++    R KP     +  ++ L ++ +VD A   L    +   
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRRGR-KPDSITFTALMDALGKAGRVDDALELLDEMKER-G 249

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK--------------------SQMSY-- 235
           +KP    +N LI    K G L  A+ +L EMK+                    SQ+    
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309

Query: 236 ------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
                       P+ ITY+TLI+GL K G   +A  LF+ M SK    PD +TY+ LI  
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG-CNPDVVTYSTLITA 368

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             +  +V+ A  + E M++ G  P++F Y +++    K G++ +A  +F EM+   L PD
Sbjct: 369 LGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPD 428

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y   +N   R GR  EA ++ ++MKE G   D+ T++ +L GL +  ++++A G+L+
Sbjct: 429 VITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLK 488

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           +L   G   +   +   L      G +++A ELL+    +G  P  ++ N L+  L KAG
Sbjct: 489 ELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +A   L  L E G KP+  S++ L+  + +  ++  AFELL+E+
Sbjct: 549 RVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEM 595



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 225/461 (48%), Gaps = 9/461 (1%)

Query: 53  ARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE 112
           A+     +S+   I+ +    + + ALE+   + + KG   N  TY T++D L +  +F+
Sbjct: 38  AKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM-QAKGCKPNLWTYNTLVDCLGKAGQFD 96

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
               +L +M    C      +  L+              +F ++    RE+  +    T 
Sbjct: 97  EALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM----RERGCVPDTFTY 152

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
            +L+    +V  +Q  ++   +  R    P+   ++ LI    K G    AF++ +EMK+
Sbjct: 153 NSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKR 212

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
            +   P+ IT++ L+D L K GR  +A+EL +EM  +  + P  +TYN LI GF + G +
Sbjct: 213 -RGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG-VKPGVVTYNALIAGFGKVGDL 270

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
             A  +++ MK NGC P+V  Y+ L+ G  K  +L EA +V  +M+     PDTI Y TL
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           IN   +AG +++A  L   MK +GC  D+VT++ ++  L +  ++E A  + E++   GI
Sbjct: 331 INGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  +Y  ++    + G+++ A  L   M  +G  P   T N  L  L + G  ++A  
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
               + E G  P+  ++  L+  + + +++  A  LL EL+
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELI 491


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 195/356 (54%), Gaps = 6/356 (1%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT--- 217
           R +P+L   +  +N L ++ +++ A++ ++   +     PN   +N LI  HCK+G+   
Sbjct: 195 RIQPNLTTFNIFINGLCKAGKLNKAEDVIE-DIKAWGFSPNIVTYNTLIDGHCKKGSAGK 253

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +  A  +LKEM  +++  PN IT++TLIDG CK+     A   FEEM  +  + P+ +TY
Sbjct: 254 MYRADAILKEMLANKIC-PNEITFNTLIDGFCKDENVLAAKNAFEEM-QRQGLKPNIVTY 311

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N LI+G    GK+D A  + + M   G  PN+  +  L+NGFCK+  ++EA+++FD++  
Sbjct: 312 NSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAE 371

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             L P+ I + T+I+ FC+AG ++E   L   M + G   ++ T+N ++ GLCR   +  
Sbjct: 372 QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRA 431

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L ++    +  +  +Y I++   C+ GE  KA +LL  ML  G  P++ T N L+ 
Sbjct: 432 AKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMD 491

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             C  G  + A      + + G +    ++ +L++  C+  KL  A  LL+E++ K
Sbjct: 492 GYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEK 547



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 157/285 (55%), Gaps = 2/285 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q   LKPN   +N LI      G L+ A  +  +M    +  PN++T++ LI+G CK   
Sbjct: 300 QRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLK-PNIVTFNALINGFCKKKM 358

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            +EA +LF+++  +D ++P+A+T+N +ID FC+ G ++    +   M + G  PNV  Y 
Sbjct: 359 IKEARKLFDDIAEQD-LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYN 417

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G C+   ++ AK++ +EM+N+ LK D + Y  LI  +C+ G   +A +LL EM   
Sbjct: 418 CLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV 477

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K + VT+N ++ G C EG ++ AL +  ++  +G   N  +Y +++   C+ G+LE A
Sbjct: 478 GVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDA 537

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
             LL  ML +G  P+  T + + + + + G   D    L+ +  M
Sbjct: 538 NRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLYNISSM 582



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 138/280 (49%), Gaps = 19/280 (6%)

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           + +D L KN +   +      ++  D+   +AL  ++L+  +    ++  A ++   +++
Sbjct: 99  SFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQD 158

Query: 303 -------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
                  N CNP       L++   K  +  E + V+ EM    ++P+   +   IN  C
Sbjct: 159 YGFKLSLNSCNP-------LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLC 211

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE---GKIEEALGMLEKLWYDGIYL 412
           +AG++++A ++++++K  G   +IVT+N ++ G C++   GK+  A  +L+++  + I  
Sbjct: 212 KAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICP 271

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N+ ++  +++  C+   +  A      M  +G  P+  T N L+  L   G   D AIAL
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL-DEAIAL 330

Query: 473 FG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  +V +G KP   ++  L+   C+ + +  A +L D++ 
Sbjct: 331 WDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 164/312 (52%), Gaps = 2/312 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   +  LI   CK   +  AF +  EM    +S PN++TY++LI GLCK   ++   
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGIS-PNIVTYNSLIHGLCKLCEWKHVT 205

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L  EMV   +I+PD  T N ++D  C+ G V  A  +++ M + G  PNV  Y  LM+G
Sbjct: 206 TLMNEMVDS-KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C   ++  A +VFD M +     + I Y TLIN +C+   VD+A+ L +EM  +    +
Sbjct: 265 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 324

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            VT+N ++ GLC  G++++A+ +  ++   G   +  +YR + ++ C+   L+KA+ LL+
Sbjct: 325 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 384

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +    + P       +L  +C+AG  EDA      L   G +P   ++ +++  +C+  
Sbjct: 385 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 444

Query: 499 KLLFAFELLDEL 510
            L  A +L  E+
Sbjct: 445 LLAEASKLFSEM 456



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 180/352 (51%), Gaps = 13/352 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLA----QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           P +  ++  +N L   N+VD A       LK  +Q     P+   F  LI+  C  G + 
Sbjct: 78  PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ-----PDATTFTTLIRGLCVEGKIG 132

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  +  +M       PN++TY TLI+GLCK+ +  EA  +F EM++K  I P+ +TYN 
Sbjct: 133 EALHLFDKMIGEGFQ-PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKG-ISPNIVTYNS 190

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI G C+  +      +M  M ++   P+VF   T+++  CKEG + EA +V D M +  
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           ++P+ + Y  L++  C    VD A+++   M  + C A+++++N ++ G C+   +++A+
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 310

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            + E++    +  N  +Y  +++  C  G L+ AI L   M+ RG +P   T   L   L
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 370

Query: 460 CKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           CK     D A+AL   +E   + P+   +  +++ +CR  +L  A +L   L
Sbjct: 371 CK-NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 421



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 157/291 (53%), Gaps = 8/291 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N LI   C     +    +L EM  S++  PN++ +ST++D LCK G    A
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI-MPNVVVFSTVVDALCKEGMIAIA 727

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ + M+ K  + PD +TY  L+DG C   ++D A K+ + M + GC PNV +Y  L+N
Sbjct: 728 HDVVDMMI-KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C+  ++ +A  + ++M    L  DT+ Y TLI+  C  GR+  A+ L  EM   G   
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT+ I+L  LC+   + EA+ +L+ +    +  +   Y I ++  C+ GELE A +L 
Sbjct: 847 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 906

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
             +  +G  P   T N ++  LCK G+ ++A   LF  ++     E+D W+
Sbjct: 907 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN-KLFRKMD-----ENDIWS 951



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 166/326 (50%), Gaps = 25/326 (7%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK---NG-- 252
           + P+    NILI   C    L  AF VL ++ K     P+++TY TL++GLCK    G  
Sbjct: 612 IPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQ-PDVVTYGTLMNGLCKMITKGIS 670

Query: 253 -----------------RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
                             ++    L  EMV+  +I+P+ + ++ ++D  C+ G +  A  
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVVDALCKEGMIAIAHD 729

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M   G  P+V  YT LM+G C   ++ EA +VFD M +    P+   Y  LIN +C
Sbjct: 730 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 789

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +  R+D+A+ LL++M  +G  AD VT+N ++ GLC  G+++ A+ +  ++   G   +  
Sbjct: 790 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 849

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +YRI+L++ C+   L +A+ LL+ +            N  +  +C+AG  E A      L
Sbjct: 850 TYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 909

Query: 476 VEMGFKPESDSWALLVELICRGRKLL 501
              G +P+  ++ +++  +C+ R LL
Sbjct: 910 SSKGLQPDVRTYNIMIHGLCK-RGLL 934



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 195/389 (50%), Gaps = 5/389 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  N  TY T+++ L + ++      +  +M  +    +   + +L+
Sbjct: 134 ALHLFDKMIGE-GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 192

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    + V  + +++   ++  P +  ++T ++ L +   V  A + +     H  
Sbjct: 193 HGLCKLCEWKHVTTLMNEMVD-SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM-IHRG 250

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN   +N L+  HC R  ++ A +V   M        N+I+Y+TLI+G CK     +A
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD-CVANVISYNTLINGYCKIQSVDKA 309

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LFEEM S+ ++ P+ +TYN LI G C  G++  A  +   M   G  P++  Y TL +
Sbjct: 310 MYLFEEM-SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK   L +A  +   ++     PD   YTT+++  CRAG +++A +L   +  +G + 
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 428

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ T+NI++ GLC++G + EA  +  ++  +G   N  +Y ++     +  E  + IELL
Sbjct: 429 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELL 488

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             ML RGF    +T+  L+  L   G+ +
Sbjct: 489 EEMLARGFSVDVSTTTLLVGMLSDDGLDQ 517



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 141/244 (57%), Gaps = 2/244 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ PN  +F+ ++   CK G +  A +V+  M K  +  P+++TY+ L+DG C      E
Sbjct: 703 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE-PDVVTYTALMDGHCLRSEMDE 761

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+++F+ MV K  + P+  +YN+LI+G+C+  ++D+A  ++E M   G   +   Y TL+
Sbjct: 762 AVKVFDTMVHKGCV-PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 820

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G C  G+LQ A  +F EM      PD + Y  L++  C+   + EA+ LLK ++     
Sbjct: 821 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLD 880

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           ADI+ +NI + G+CR G++E A  +   L   G+  +  +Y I+++  C++G L++A +L
Sbjct: 881 ADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKL 940

Query: 437 LRLM 440
            R M
Sbjct: 941 FRKM 944



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 6/327 (1%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H +  P+T  FN L+    K     +   + ++M    +  P++ T + +I+ LC   R 
Sbjct: 38  HKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIP-PDVYTLAIVINSLCHLNRV 96

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A     +++      PDA T+  LI G C  GK+  A  + + M   G  PNV  Y T
Sbjct: 97  DFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGT 155

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK+ ++ EA  +F EM    + P+ + Y +LI+  C+         L+ EM +  
Sbjct: 156 LINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 215

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+ T N ++  LC+EG + EA  +++ + + G+  N  +Y  +++  C + E++ A+
Sbjct: 216 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 275

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++   M+ +  + +  + N L+   CK    + A      +      P + ++  L+  +
Sbjct: 276 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335

Query: 495 CRGRKLLFAFELLDELVIKESGTIQVP 521
           C   +L  A  L  E+V +     Q+P
Sbjct: 336 CHVGRLQDAISLFHEMVARG----QIP 358



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 152/300 (50%), Gaps = 7/300 (2%)

Query: 164  PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
            P++   ST ++ L +   + +A + +    +   ++P+   +  L+  HC R  ++ A +
Sbjct: 706  PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR-GVEPDVVTYTALMDGHCLRSEMDEAVK 764

Query: 224  VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            V   M   +   PN+ +Y+ LI+G C+  R  +A+ L E+M S   ++ D +TYN LI G
Sbjct: 765  VFDTMVH-KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM-SLQGLIADTVTYNTLIHG 822

Query: 284  FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             C  G++  A  +   M  +G  P++  Y  L++  CK   L EA  +   ++   L  D
Sbjct: 823  LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 882

Query: 344  TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
             + Y   I+  CRAG ++ A +L   +  +G + D+ T+NI++ GLC+ G ++EA  +  
Sbjct: 883  ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFR 942

Query: 404  KLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL---LRLMLCRGFLPHYATSNELLVRLC 460
            K+  + I+ N  S R   +   QK  L + I+L   + +M  + F+ H   S  +L + C
Sbjct: 943  KMDENDIWSNSTSSRNQKSLIYQKIMLPE-IDLVYSISVMFEKMFICHGCPSMWILFKEC 1001



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 122/259 (47%), Gaps = 1/259 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA+  F  M+ K Q  P  + +N L+    +         +   M + G  P+V+    +
Sbjct: 28  EALSTFNRMLHK-QPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 86

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N  C   ++  A     ++     +PD   +TTLI   C  G++ EAL L  +M   G 
Sbjct: 87  INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 146

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + ++VT+  ++ GLC++ ++ EA  +  ++   GI  N  +Y  +++  C+  E +    
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 206

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L+  M+    +P   T N ++  LCK GM  +A   +  ++  G +P   ++  L++  C
Sbjct: 207 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 266

Query: 496 RGRKLLFAFELLDELVIKE 514
              ++  A ++ D +V K+
Sbjct: 267 LRNEVDVAVKVFDTMVHKD 285



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 110/522 (21%), Positives = 213/522 (40%), Gaps = 66/522 (12%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           + D  V+  DT V     +  IS+   I+     +    A+ +F  +S Q+    N  TY
Sbjct: 270 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE-LTPNTVTY 328

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
            T++  L    + +   ++  +M           +  L  +       ++ + +   I  
Sbjct: 329 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 388

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGT 217
            +   P ++  +T L+ +  + +++ A++   +SN   + L+PN   +NI+I   CK+G 
Sbjct: 389 -SNWDPDIQIYTTILDGMCRAGELEDARDL--FSNLSSKGLQPNVWTYNIMIHGLCKQGL 445

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L  A ++  EM K+  S PN  TY+ +  G  +N      IEL EEM+++   + D  T 
Sbjct: 446 LAEASKLFSEMNKNGCS-PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTT 503

Query: 278 NVLI-----DGFCRGGK-----------------------------------------VD 291
            +L+     DG  +  K                                         +D
Sbjct: 504 TLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLD 563

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A      M +    P+  ++T L+    K         +  +M +F + PD      LI
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 623

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N FC   R+  A  +L ++ + G + D+VT+  ++ GLC+         M+ K    GI 
Sbjct: 624 NSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK---------MITK----GIS 670

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            +  +Y  +++  C   E +    LL  M+    +P+    + ++  LCK GM   A   
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 730

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +  +++ G +P+  ++  L++  C   ++  A ++ D +V K
Sbjct: 731 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 772



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 103/222 (46%)

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +D A      M +    P+  ++  L+    K         +  +M +F + PD      
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +IN  C   RVD A   L ++ + G + D  TF  ++ GLC EGKI EAL + +K+  +G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
              N  +Y  ++N  C+  ++ +A  +   M+ +G  P+  T N L+  LCK    +   
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             +  +V+    P+  +   +V+ +C+   +  A +++D ++
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 247



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 66/154 (42%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +DEAL     M  +      V FN +L  + +       L +  ++   GI  +  +  I
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V+N  C    ++ A   L  +L  G  P   T   L+  LC  G   +A      ++  G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           F+P   ++  L+  +C+ R++  AF +  E++ K
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITK 179


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 176/317 (55%), Gaps = 8/317 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  LIK  C    +  A  +   M+K   + PN +TY TLI GLC+ G    A++
Sbjct: 159 PNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT-PNAVTYGTLIKGLCQTGNVNIALK 217

Query: 260 LFEEMVSKDQIL-----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           L +EM++          P  +TY+++IDG C+ G+ D AK++ E MK  G  P+V +Y+T
Sbjct: 218 LHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYST 277

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++GFC  GK  ++K +FDEM +  ++PD + ++ LI+  C+ G+V EA +LL+ M +RG
Sbjct: 278 LIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRG 337

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +++T+N ++ G C  G +  A  +   +   G+  ++ SY  ++N  C+  ++++A+
Sbjct: 338 IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAM 397

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVEL 493
            L   ML  G  P+  T   LL  L + G   DA   LFG+++  G    S  + + ++ 
Sbjct: 398 NLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK-KLFGVMKTYGVSANSQIYGIFLDG 456

Query: 494 ICRGRKLLFAFELLDEL 510
           +C+   L  A EL +EL
Sbjct: 457 LCKNDCLFEAMELFNEL 473



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 209/434 (48%), Gaps = 12/434 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS--- 144
           ++G+  N  TY T++  L    +      +  +M    C  +   +  L+K         
Sbjct: 154 RRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVN 213

Query: 145 ----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
               LH+ +L    +       KP +   S  ++ L +  + D A+   +       + P
Sbjct: 214 IALKLHKEMLNDASQYG--VNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQ-GMIP 270

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   ++ LI   C  G  + +  +  EM   Q   P+++T+S LID LCK G+  EA +L
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMV-DQGVQPDMVTFSVLIDTLCKEGKVTEAKKL 329

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            E M+ +  I+P+ +TYN LIDGFC  G ++ A+++   M + G  P+  +YTTL+NG+C
Sbjct: 330 LEVMIQRG-IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  K++EA  +++EM      P+   Y TL+    + G+V +A +L   MK  G  A+  
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQ 448

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            + I L GLC+   + EA+ +  +L      LN  +Y  +++  C+ G+LE A EL   +
Sbjct: 449 IYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKL 508

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G  P   T N ++   CK G  ++A I    + E G  P+  ++  L+   C G KL
Sbjct: 509 SQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKL 568

Query: 501 LFAFELLDELVIKE 514
               +LL ++V K+
Sbjct: 569 EEVIKLLHKMVQKD 582



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 171/316 (54%), Gaps = 2/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+   F++LI   CK G +  A ++L+ M +  +  PNLITY++LIDG C  G    A
Sbjct: 303 VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI-VPNLITYNSLIDGFCMVGDLNSA 361

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF  M SK  + PD ++Y  LI+G+C+  KV  A  +   M   G +PNV  Y TL+ 
Sbjct: 362 RELFLSMPSKG-LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLK 420

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  ++GK+ +AK++F  MK + +  ++  Y   ++  C+   + EA+EL  E+K    K 
Sbjct: 421 GLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL 480

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I  ++ ++ GLC+ GK+E A  + EKL  +G+  +  +Y I+++  C+ G+++ A  L 
Sbjct: 481 NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF 540

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P     N LL   C+    E+    L  +V+    P + S  ++V+++C+ 
Sbjct: 541 EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600

Query: 498 RKLLFAFELLDELVIK 513
            K     +LL +  ++
Sbjct: 601 EKYKKFVDLLPKFPVQ 616



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 16/239 (6%)

Query: 285 CRGGKVD--RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           C+ G +   +A    + M  +   P + ++  L+ G  K     +   +++EM+   L P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D    + L NC C   RV EAL  +  +  RG   ++VT+  ++ GLC E +I EA  + 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML---------CRGFLPHYATSN 453
            ++   G   N  +Y  ++   CQ G +  A++L + ML         C+   P   T +
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCK---PGVITYS 241

Query: 454 ELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            ++  LCK G  ED A  LF  +   G  P+  S++ L+   C   K   +  L DE+V
Sbjct: 242 IIIDGLCKVG-REDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 184/344 (53%), Gaps = 38/344 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P T +FN+L++   + G L SA +V  EM++S    P ++T++TLI G+C+       
Sbjct: 182 MAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQ--PTVVTFNTLISGMCRARDLDAV 239

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L++EM S   + PD  TY  LI GFCR G+++ A K+   M++ G NPN   +TTL++
Sbjct: 240 DGLYKEM-SDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLID 298

Query: 318 GFCKEGK-----------------------------------LQEAKEVFDEMKNFLLKP 342
             CKEG                                    L+ A+ + +EMKN  LKP
Sbjct: 299 AHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKP 358

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + YTTLI+  C+ G++D A+++ ++M E+    D VT+  ++ GL + G+  +A  +L
Sbjct: 359 DKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVL 418

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++    +  +  +Y +V++  C+KG+++   +LL+ M  +G  P   T N ++  LCK 
Sbjct: 419 REMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKL 478

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           G  ++A + L  ++ +G  P+  ++ +L++  C+  K+  + EL
Sbjct: 479 GQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL 522



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 154/275 (56%), Gaps = 2/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    ++ L+    + G    A ++F+EM  +  + P  +T+N LI G CR   +D    
Sbjct: 184 PETRLFNVLMRDFVRLGELVSARKVFDEM--RRSVQPTVVTFNTLISGMCRARDLDAVDG 241

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M + G  P+V+ Y  L+ GFC+ G+++ A ++F+EM++  + P+ + +TTLI+  C
Sbjct: 242 LYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHC 301

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G V+  ++L ++M+ RG   D+V +N ++ GLCR   ++ A  ++E++   G+  +K 
Sbjct: 302 KEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKV 361

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C+ G+L+ A+++ + M  +       T   L+  L KAG   DA   L  +
Sbjct: 362 TYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREM 421

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E   +P++ ++ ++++  CR   +   F+LL E+
Sbjct: 422 MEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEM 456



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 1/213 (0%)

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           + G  P    +  LM  F + G+L  A++VFDEM+  + +P  + + TLI+  CRA  +D
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSV-QPTVVTFNTLISGMCRARDLD 237

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
               L KEM + G K D+ T+  ++ G CR G++E A+ M  ++   G+  N   +  ++
Sbjct: 238 AVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLI 297

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C++G +   ++L + M  RG +P     N L+  LC+A   + A   +  +   G K
Sbjct: 298 DAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLK 357

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           P+  ++  L++  C+  KL  A ++  ++  KE
Sbjct: 358 PDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKE 390


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 181/347 (52%), Gaps = 3/347 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +     + +VD A+  +    +   LKPN   FN ++   CK G +E A +
Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMREG-GLKPNLVTFNSMVNGMCKAGKMEDARK 281

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V  EM +  ++ P+ ++Y+TL+ G CK G   EA+ +F EM  K  I+PD +T+  LI  
Sbjct: 282 VFDEMVREGLA-PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG-IMPDVVTFTSLIHV 339

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G ++RA  ++  M+  G   N   +T L++GFCK+G L +A      MK   +KP 
Sbjct: 340 MCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPS 399

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  LIN +C  GR+DEA ELL EM+ +G K D+VT++ I+   C+      A  + +
Sbjct: 400 VVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 459

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  +  +Y  ++   C +  L  A  L + M+  G  P   T   L+   CK G
Sbjct: 460 QMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 519

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             E A      +V+ G  P+  ++++L+  + +  + + A +LL +L
Sbjct: 520 NVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 176/312 (56%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N L+    + G ++ A  ++  M++  +  PNL+T++++++G+CK G+  +A +
Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLK-PNLVTFNSMVNGMCKAGKMEDARK 281

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+EMV ++ + PD ++YN L+ G+C+ G    A  +   M   G  P+V  +T+L++  
Sbjct: 282 VFDEMV-REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 340

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G L+ A  +  +M+   L+ + + +T LI+ FC+ G +D+AL  ++ MK+   K  +
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSV 400

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +N ++ G C  G+++EA  +L ++   G+  +  +Y  +++  C+  +   A EL + 
Sbjct: 401 VCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQ 460

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML +G LP   T + L+  LC      DA +    ++++G +P+  ++  L++  C+   
Sbjct: 461 MLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 520

Query: 500 LLFAFELLDELV 511
           +  A  L D++V
Sbjct: 521 VESALSLHDKMV 532



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 158/279 (56%), Gaps = 3/279 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN+ TY+ L+  LC  G  +EA+ +  +M       P+ +TYN L+  F R G+VD A++
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAG-CGPNVVTYNTLVAAFFRAGEVDGAER 246

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M+  G  PN+  + +++NG CK GK+++A++VFDEM    L PD + Y TL+  +C
Sbjct: 247 LVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYC 306

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +AG   EAL +  EM ++G   D+VTF  ++  +C+ G +E A+ ++ ++   G+ +N+ 
Sbjct: 307 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEV 366

Query: 416 SYRIVLNFSCQKGELEKAIELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           ++  +++  C+KG L+ A+  +R M  CR   P     N L+   C  G  ++A   L  
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCR-IKPSVVCYNALINGYCMVGRMDEARELLHE 425

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +   G KP+  +++ ++   C+      AFEL  +++ K
Sbjct: 426 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 464



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 192/408 (47%), Gaps = 20/408 (4%)

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK- 167
           K   A  A  RQ T E C  H       + H    +L    L    ++ P+   +  L  
Sbjct: 39  KNMAAASASTRQATAEACSSH-------VHHAHLAAL----LNASARLPPLPLSRLHLPL 87

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI--FNILIKHHCKRGTLESAFEVL 225
           ++ T   L+     + L   FL+     LRL P++    F+ LIK +       S     
Sbjct: 88  SLPTASRLVASFPPLPLLVCFLRA----LRLLPSSPPRPFDSLIKSYASLPNRASLAAAA 143

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
               +S    P+++ Y+ ++  L  +     A   F+ M+S D + P+  TYN+L+   C
Sbjct: 144 LAFARSAGYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLS-DGVAPNVYTYNILVRALC 201

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
             G    A  I+  M+  GC PNV  Y TL+  F + G++  A+ +   M+   LKP+ +
Sbjct: 202 GRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLV 261

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            + +++N  C+AG++++A ++  EM   G   D V++N ++GG C+ G   EAL +  ++
Sbjct: 262 TFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 321

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              GI  +  ++  +++  C+ G LE+A+ L+R M  RG   +  T   L+   CK G  
Sbjct: 322 TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 381

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +DA +A+ G+ +   KP    +  L+   C   ++  A ELL E+  K
Sbjct: 382 DDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 429



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 213/441 (48%), Gaps = 23/441 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  T+ ++++ + +  K E    V  +M  E        +  L+  +       
Sbjct: 253 EGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSH 312

Query: 148 RVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
             L +F ++   T++   P +   ++ ++++ ++  ++ A   ++   +   L+ N   F
Sbjct: 313 EALSVFAEM---TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRER-GLQMNEVTF 368

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   CK+G L+ A   ++ MK+ ++  P+++ Y+ LI+G C  GR  EA EL  EM 
Sbjct: 369 TALIDGFCKKGFLDDALLAVRGMKQCRIK-PSVVCYNALINGYCMVGRMDEARELLHEME 427

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +K  + PD +TY+ +I  +C+      A ++ + M   G  P+   Y++L+   C E +L
Sbjct: 428 AKG-LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            +A  +F  M    L+PD   YT+LI+  C+ G V+ AL L  +M + G   D+VT++++
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL 546

Query: 386 LGGLCREGKIEEALGMLEKLWY-DGIYLN-----------KASYRIVLNFS---CQKGEL 430
           + GL +  +  EA  +L KL++ D I  N           KA  + VL      C KG +
Sbjct: 547 INGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLM 606

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            +A ++ + ML R +    +  + L+   C+AG    A      +++ GF P S S   L
Sbjct: 607 NEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISL 666

Query: 491 VELICRGRKLLFAFELLDELV 511
           +  +     ++ A +++ +L+
Sbjct: 667 IRGLFENGMVVEADQVIQQLL 687



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 190/410 (46%), Gaps = 63/410 (15%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F  ++ QKG   +  T+ +++  + +    E    ++RQM     + +E  F  L+
Sbjct: 314 ALSVFAEMT-QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALI 372

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F      +  L              +++ +  C                        R
Sbjct: 373 DGFCKKGFLDDALL-------------AVRGMKQC------------------------R 395

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+   +N LI  +C  G ++ A E+L EM+   +  P+++TYST+I   CKN     A
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK-PDVVTYSTIISAYCKNCDTHSA 454

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL ++M+ K  +LPDA+TY+ LI   C   ++  A  + + M   G  P+ F YT+L++
Sbjct: 455 FELNQQMLEKG-VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 513

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC-- 375
           G CKEG ++ A  + D+M    + PD + Y+ LIN   ++ R  EA +LL ++       
Sbjct: 514 GHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIP 573

Query: 376 -------------KADIVTFNIILGGLCREGKIEEA----LGMLEKLWYDGIYLNKASYR 418
                        KA++ +   +L G C +G + EA      ML++ W     L+ + Y 
Sbjct: 574 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNW----NLDGSVYS 629

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           ++++  C+ G + KA+   + ML  GF P+  ++  L+  L + GM  +A
Sbjct: 630 VLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEA 679



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 17/230 (7%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L+P+   +  LI  HCK G +ESA  +  +M K+ +  P+++TYS LI+GL K+ R  
Sbjct: 499 LGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV-LPDVVTYSVLINGLSKSARAM 557

Query: 256 EAIELFEEMVSKDQILPDALTYNVL---------------IDGFCRGGKVDRAKKIMEFM 300
           EA +L  ++  +D I P    Y+ L               + GFC  G ++ A K+ + M
Sbjct: 558 EAQQLLFKLYHEDPI-PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM 616

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
            +   N +   Y+ L++G C+ G + +A     +M      P++    +LI      G V
Sbjct: 617 LDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMV 676

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            EA ++++++      AD      ++     EG ++  L +L  +  DG+
Sbjct: 677 VEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 726


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 187/348 (53%), Gaps = 7/348 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   ST +N   +  +V+ A     +  + L + PN   +N LI   CK G L+ AF 
Sbjct: 244 PDVYLFSTAINAFCKGGKVEDAIQLF-FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFR 302

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
             ++M K  ++   LITYS LI+GL K  +F EA  + +E + K    P+ + YN LIDG
Sbjct: 303 FKEKMVKDGVN-ATLITYSVLINGLMKLEKFNEANSVLKETLEKG-FTPNEVVYNTLIDG 360

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLK 341
           +C+ G +  A +I   M + G NPN     +++ GFCK G++++A+ + +EM  + F + 
Sbjct: 361 YCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 420

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P    +TT+I+  C   R + AL  L+EM  R  + +      ++GGLC+EGK  +A+ +
Sbjct: 421 PG--AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 478

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             +L   G   N  +   +++  C+ G +++A+ LL+ ML RGF+    T N L+   CK
Sbjct: 479 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 538

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            G  E+       +V+ G +P++ ++ LL+  +CR  KL  A  L +E
Sbjct: 539 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 586



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 213/427 (49%), Gaps = 12/427 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG N N+ T  +I+    +  + E  + +L +M       + G F  ++      S  E
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTC 203
             L    ++  +   +P+   ++T +  L +    S+ V+L    L+          N  
Sbjct: 439 SALRFLREML-LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG-----FGANLV 492

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
             N LI   CK G ++ A  +LK+M +      + ITY+TLI G CK G+  E  +L  E
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVL-DKITYNTLISGCCKEGKVEEGFKLRGE 551

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           MV K  I PD  TYN+LI G CR GK+D A  +    K+    PNV+ Y  +++G+CK  
Sbjct: 552 MV-KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 610

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K++E +++F E+    L+ +++ Y TLI  +CR G   EA +L  +M+ +G      T++
Sbjct: 611 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 670

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G+C  G++E+A  +++++  +G+  N   Y  ++   C+ G+++K + +L+ M   
Sbjct: 671 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 730

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P+  T   ++    K+G  + AA  L  +V  G  P++ ++ +L    C+  K+   
Sbjct: 731 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 790

Query: 504 FELLDEL 510
           F++ D +
Sbjct: 791 FKICDYM 797



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 5/310 (1%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           TC F  L+    K   LE ++ V + M+  Q   P++  +ST I+  CK G+  +AI+LF
Sbjct: 214 TCTF--LLSSLVKANELEKSYWVFETMR--QGVSPDVYLFSTAINAFCKGGKVEDAIQLF 269

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            +M  K  + P+ +TYN LI G C+ G +D A +  E M  +G N  +  Y+ L+NG  K
Sbjct: 270 FDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             K  EA  V  E       P+ + Y TLI+ +C+ G + +AL +  +M  +G   + VT
Sbjct: 329 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 388

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
            N I+ G C+ G++E+A  +LE++   G  +N  ++  ++++ C     E A+  LR ML
Sbjct: 389 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 448

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            R   P+      L+  LCK G   DA    F L+E GF     +   L+  +C+   + 
Sbjct: 449 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 508

Query: 502 FAFELLDELV 511
            A  LL +++
Sbjct: 509 EAVRLLKKML 518



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 203/435 (46%), Gaps = 22/435 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF------- 140
           +KGF  N   Y T++D   +         +   M  +    +     ++++ F       
Sbjct: 344 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 403

Query: 141 -SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-L 198
            + C L E +   F  I+P         A +T ++ L  +++ + A  FL+     LR +
Sbjct: 404 QAECILEEMLSRGF-SINP--------GAFTTIIHWLCMNSRFESALRFLR--EMLLRNM 452

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN  +   L+   CK G    A E+   + +      NL+T + LI GLCK G  +EA+
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG-ANLVTTNALIHGLCKTGNMQEAV 511

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L ++M+ +  +L D +TYN LI G C+ GKV+   K+   M   G  P+ F Y  L++G
Sbjct: 512 RLLKKMLERGFVL-DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 570

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+ GKL EA  +++E K+  L P+   Y  +I+ +C+A +++E  +L  E+  +  + +
Sbjct: 571 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            V +N ++   CR G   EA  + + +   GI    A+Y  +++  C  G +E A  L+ 
Sbjct: 631 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M   G LP+      L+   CK G  +     L  +      P   ++ ++++   +  
Sbjct: 691 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSG 750

Query: 499 KLLFAFELLDELVIK 513
            +  A +LL E+V K
Sbjct: 751 DMKTAAKLLHEMVGK 765



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 206/428 (48%), Gaps = 14/428 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G N    TY+ +++ L + +KF   ++VL++   +    +E ++  L+  +  C +  
Sbjct: 309 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGY--CKMGN 366

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLK-YSNQHLRLKPNT 202
               +  +   +++    +   S  LN +I+      Q++ A+  L+   ++   + P  
Sbjct: 367 LGDALRIRGDMVSK---GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA 423

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             F  +I   C     ESA   L+EM    M  PN    +TL+ GLCK G+  +A+EL+ 
Sbjct: 424 --FTTIIHWLCMNSRFESALRFLREMLLRNMR-PNDGLLTTLVGGLCKEGKHSDAVELWF 480

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            ++ K     + +T N LI G C+ G +  A ++++ M   G   +   Y TL++G CKE
Sbjct: 481 RLLEKG-FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 539

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK++E  ++  EM    ++PDT  Y  LI+  CR G++DEA+ L  E K R    ++ T+
Sbjct: 540 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 599

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
            +++ G C+  KIEE   +  +L    + LN   Y  ++   C+ G   +A +L   M  
Sbjct: 600 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 659

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G  P  AT + L+  +C  G  EDA   +  + + G  P    +  L+   C+  ++  
Sbjct: 660 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719

Query: 503 AFELLDEL 510
              +L E+
Sbjct: 720 VVNVLQEM 727



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 191/391 (48%), Gaps = 35/391 (8%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            +GF+ N   + TI+  L    +FE+    LR+M     + ++G+   L+        H 
Sbjct: 414 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 473

Query: 148 RVLEMFHK----------------IHPITREKPSLKAISTCLNLLIESNQVD-LAQNFL- 189
             +E++ +                IH + +     +A+     +L     +D +  N L 
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533

Query: 190 -------------KYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
                        K   + ++  ++P+T  +N+LI   C+ G L+ A  +  E K   + 
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL- 592

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN+ TY  +IDG CK  +  E  +LF E+++++  L +++ YN LI  +CR G    A 
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLEL-NSVVYNTLIRAYCRNGNTVEAF 651

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           K+ + M++ G  P    Y++L++G C  G++++AK + DEM+   L P+ + YT LI  +
Sbjct: 652 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY 711

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G++D+ + +L+EM       + +T+ +++ G  + G ++ A  +L ++   GI  + 
Sbjct: 712 CKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT 771

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
            +Y ++ N  C++G++E+  ++   M   G 
Sbjct: 772 VTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 174/350 (49%), Gaps = 18/350 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH---FSNCS 144
           +KGF  N  T   ++  L +    +    +L++M         G  L+ + +    S C 
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM------LERGFVLDKITYNTLISGCC 537

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
              +V E F     + ++   ++  +   NLLI       ++D A N          L P
Sbjct: 538 KEGKVEEGFKLRGEMVKQ--GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR-DLVP 594

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   + ++I  +CK   +E   ++  E+    +   N + Y+TLI   C+NG   EA +L
Sbjct: 595 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLEL-NSVVYNTLIRAYCRNGNTVEAFKL 653

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M SK  I P   TY+ LI G C  G+++ AK +++ M+  G  PNV  YT L+ G+C
Sbjct: 654 HDDMRSKG-IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G++ +   V  EM ++ + P+ I YT +I+ + ++G +  A +LL EM  +G   D V
Sbjct: 713 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 772

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           T+N++  G C+EGKIEE   + + +  +G+ L++ +Y  +++   Q   L
Sbjct: 773 TYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 153/299 (51%), Gaps = 8/299 (2%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLC---KNGRFREAIELFEEMVSKDQILPDA 274
           + SA   L E+ +S ++   +     LI   C   +N  FR AI +F  + +K  + P  
Sbjct: 157 IASAMADLNEVGESGVA---VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKG-VFPTV 212

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            T   L+    +  +++++  + E M+  G +P+V+ ++T +N FCK GK+++A ++F +
Sbjct: 213 KTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFD 271

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M+   + P+ + Y  LI+  C+ G +DEA    ++M + G  A ++T+++++ GL +  K
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 331

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
             EA  +L++    G   N+  Y  +++  C+ G L  A+ +   M+ +G  P+  T N 
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++   CK G  E A   L  ++  GF     ++  ++  +C   +   A   L E++++
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 450


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 197/388 (50%), Gaps = 11/388 (2%)

Query: 124 ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
           ETC     +FL L +      L+    EMF       R   ++   +  +N+L +  ++ 
Sbjct: 215 ETCNDMLSLFLKLNRMEMAWVLYA---EMFR-----LRISSTVYTFNIMVNVLCKEGKLK 266

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
            A+ F+ +  + L  KPN   +N +I  +  RG +E A  +L  M+   +  P+  TY +
Sbjct: 267 KAREFIGFM-EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE-PDSYTYGS 324

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI G+CK GR  EA  LF++MV +  ++P+A+TYN LIDG+C  G ++RA    + M   
Sbjct: 325 LISGMCKEGRLEEASGLFDKMV-EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 383

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P+V  Y  L++    EG++ EA ++  EM+   + PD I Y  LIN + R G   +A
Sbjct: 384 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKA 443

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            +L  EM  +G +   VT+  ++  L R  +++EA  + EK+   G+  +   +  +++ 
Sbjct: 444 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDG 503

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C  G +E+A  LL+ M  +   P   T N L+   C+ G  E+A + L  +   G KP+
Sbjct: 504 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 563

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             S+  L+    R   +  AF + DE++
Sbjct: 564 HISYNTLISGYGRRGDIKDAFRVRDEML 591



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 162/295 (54%), Gaps = 2/295 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N LI  +C +G LE AF    EM K  +  P++ TY+ L+  L   GR  EA
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI-MPSVSTYNLLVHALFMEGRMGEA 408

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ +EM  K  I+PDA+TYN+LI+G+ R G   +A  +   M + G  P    YT+L+ 
Sbjct: 409 DDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 467

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              +  +++EA ++F+++ +  + PD I +  +++  C  G V+ A  LLKEM  +    
Sbjct: 468 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 527

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VTFN ++ G CREGK+EEA  +L+++   GI  +  SY  +++   ++G+++ A  + 
Sbjct: 528 DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVR 587

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             ML  GF P   T N L+  LCK    + A   L  +V  G  P+  ++  L+E
Sbjct: 588 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 642



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 188/354 (53%), Gaps = 9/354 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLE 219
           KP++ + +T ++       ++ A+  L      +R+K   P++  +  LI   CK G LE
Sbjct: 281 KPNVVSYNTIIHGYSSRGNIEGARRIL----DAMRVKGIEPDSYTYGSLISGMCKEGRLE 336

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  +  +M +  +  PN +TY+TLIDG C  G    A    +EMV K  I+P   TYN+
Sbjct: 337 EASGLFDKMVEIGL-VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG-IMPSVSTYNL 394

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L+      G++  A  +++ M+  G  P+   Y  L+NG+ + G  ++A ++ +EM +  
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           ++P  + YT+LI    R  R+ EA +L +++ ++G   D++ FN ++ G C  G +E A 
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L+++    +  ++ ++  ++   C++G++E+A  LL  M  RG  P + + N L+   
Sbjct: 515 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 574

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + G  +DA      ++ +GF P   ++  L++ +C+ ++   A ELL E+V K
Sbjct: 575 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 195/365 (53%), Gaps = 11/365 (3%)

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLI----ESNQVDLA-QNFLKYSNQHLRLKPNTCIF 205
           E+F ++  ++R++ S+K+ S   +LL+    E  + D A + F     + +  K  TC  
Sbjct: 162 ELFDEL-TLSRDRLSVKS-SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETC-- 217

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N ++    K   +E A+ +  EM + ++S   + T++ +++ LCK G+ ++A E F   +
Sbjct: 218 NDMLSLFLKLNRMEMAWVLYAEMFRLRIS-STVYTFNIMVNVLCKEGKLKKARE-FIGFM 275

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
                 P+ ++YN +I G+   G ++ A++I++ M+  G  P+ + Y +L++G CKEG+L
Sbjct: 276 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 335

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EA  +FD+M    L P+ + Y TLI+ +C  G ++ A     EM ++G    + T+N++
Sbjct: 336 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 395

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +  L  EG++ EA  M++++   GI  +  +Y I++N   + G  +KA +L   ML +G 
Sbjct: 396 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGI 455

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P + T   L+  L +    ++A      +++ G  P+   +  +V+  C    +  AF 
Sbjct: 456 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFM 515

Query: 506 LLDEL 510
           LL E+
Sbjct: 516 LLKEM 520



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 150/286 (52%), Gaps = 1/286 (0%)

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           + + ++S  + I +  L+   C+  R  EA + F  M+ +  I+P   T N ++  F + 
Sbjct: 169 LSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFY-MMKEKGIVPKIETCNDMLSLFLKL 227

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            +++ A  +   M     +  V+ +  ++N  CKEGKL++A+E    M+    KP+ + Y
Sbjct: 228 NRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSY 287

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            T+I+ +   G ++ A  +L  M+ +G + D  T+  ++ G+C+EG++EEA G+ +K+  
Sbjct: 288 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 347

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  N  +Y  +++  C KG+LE+A      M+ +G +P  +T N L+  L   G   +
Sbjct: 348 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 407

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A   +  + + G  P++ ++ +L+    R      AF+L +E++ K
Sbjct: 408 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK 453



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 45/339 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   ++ TY +++  + +  + E    +  +M       +   +  L+  + N    ER
Sbjct: 313 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 372

Query: 149 VL----EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
                 EM  K        PS+   +  ++ L    ++  A + +K   +   + P+   
Sbjct: 373 AFSYRDEMVKK-----GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK-GIIPDAIT 426

Query: 205 FNILIKHHCKRGTLESAFEVLKEM-----KKSQMSY------------------------ 235
           +NILI  + + G  + AF++  EM     + + ++Y                        
Sbjct: 427 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 486

Query: 236 -----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
                P++I ++ ++DG C NG    A  L +EM  +  + PD +T+N L+ G CR GKV
Sbjct: 487 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKV 545

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           + A+ +++ MK  G  P+  +Y TL++G+ + G +++A  V DEM +    P  + Y  L
Sbjct: 546 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNAL 605

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           I C C+    D A ELLKEM  +G   D  T+  ++ G+
Sbjct: 606 IKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 205/369 (55%), Gaps = 10/369 (2%)

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNIL 208
           +E  +K     R +P+L + +  +N L +  +++ A + ++  +  +R +  N   +N L
Sbjct: 147 MEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE--DMKVRGVSANVITYNTL 204

Query: 209 IKHHCKRGTLESAFE---VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           I  +CK G +   ++   +LKEM+   +  PN +T++ LIDG CK+     A+++F EM 
Sbjct: 205 IDGYCKMGKIGKMYKADAILKEMRADGIC-PNEVTFNILIDGFCKDKNVSAAMKVFAEM- 262

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           ++  + P+ +TYN LI+G C  GKV+ A  + + M N+   PN+  +  L+NGFCK   +
Sbjct: 263 NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMV 322

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           ++A E+FD+M    + P+   Y  LI+ +C+   +++A  L + M  +G   D+ T+N +
Sbjct: 323 KQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLCR+G +E A  ++ ++    +  +  +Y I+++  C KGE++KA+ LL  M  +G 
Sbjct: 383 IAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAF 504
            P   T N ++   CK G    AA+ L   +E +G      ++ +L++  C+  KL  A 
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLR-AALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDAN 501

Query: 505 ELLDELVIK 513
            LL+E++ K
Sbjct: 502 GLLNEMLEK 510



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 168/293 (57%), Gaps = 2/293 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FNILI   CK   + +A +V  EM + Q   PN++TY++LI+GLC NG+  EA  
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNR-QGVKPNVVTYNSLINGLCNNGKVNEATA 292

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L ++MV+   + P+ +T+N L++GFC+   V +A ++ + M   G  PNV  Y  L++ +
Sbjct: 293 LRDQMVNS-CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY 351

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+  +++A  ++  M    + PD   Y  LI   CR G ++ A  L+ EM  +  KAD+
Sbjct: 352 CKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADL 411

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+NI++  LC +G++++AL +L+++   G+  ++ +Y  +++  C++G L  A+ L   
Sbjct: 412 ITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQ 471

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           M   G L + AT N L+   CK    EDA   L  ++E G  P   ++ ++ E
Sbjct: 472 MEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 42/388 (10%)

Query: 89  KGFNHNNATYATILD---KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           +G + N  TY T++D   K+ +  K    DA+L++M  +    +E  F  L+  F     
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC---- 247

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
                                K +S  + +  E N+  +              KPN   +
Sbjct: 248 -------------------KDKNVSAAMKVFAEMNRQGV--------------KPNVVTY 274

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N LI   C  G +  A  +  +M  S +  PN+IT++ L++G CKN   ++A ELF++M 
Sbjct: 275 NSLINGLCNNGKVNEATALRDQMVNSCLK-PNIITHNALLNGFCKNKMVKQAGELFDDM- 332

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K  I P+  TYN+LID +C+   ++ A  +   M   G  P+V  Y  L+ G C++G L
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A+ +  EM    LK D I Y  LI+  C  G + +AL LL EM  +G K   +T+N +
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G C+EG +  AL +  ++   G   N A+Y +++   C+K +LE A  LL  ML +G 
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALF 473
           +P+  T   +   + + G   D    L+
Sbjct: 513 IPNRMTYEIVTEEMMEKGFVPDIEGHLY 540



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 130/249 (52%), Gaps = 3/249 (1%)

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VS D    +++  ++L+  + +  +     +  +   + G   +V +   LM+G  K G+
Sbjct: 84  VSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGE 143

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + + + V+ EM    ++P  I +  +IN  C+ G++++A +++++MK RG  A+++T+N 
Sbjct: 144 IGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNT 203

Query: 385 ILGGLCREGKIE---EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ G C+ GKI    +A  +L+++  DGI  N+ ++ I+++  C+   +  A+++   M 
Sbjct: 204 LIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMN 263

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            +G  P+  T N L+  LC  G   +A      +V    KP   +   L+   C+ + + 
Sbjct: 264 RQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK 323

Query: 502 FAFELLDEL 510
            A EL D++
Sbjct: 324 QAGELFDDM 332


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 189/376 (50%), Gaps = 4/376 (1%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKP--SLKAISTCLNLLIESNQVDLAQNFLK 190
           FLN M++       + + E  +  H + +  P  S+   +  L  +++      A + +K
Sbjct: 40  FLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVK 99

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
             +  L +KP+T I N++I   C    +   F VL  M K  +  P+++T++ LI+GLC 
Sbjct: 100 EMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLE-PSVVTFTILINGLCV 158

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G    A+EL +  V K     D  TY VLI+G C+ GK   A   +  M+    NPNV 
Sbjct: 159 KGDVGRAVELVDH-VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVV 217

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y+T+M+G CK+G + EA  +  EM    +KP+ + YT LI   C  GR  EA  LL EM
Sbjct: 218 VYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEM 277

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            + G   D+ + NI++  LC+EGKI +A  ++  +   G   +  +Y  +++  C + ++
Sbjct: 278 MKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQM 337

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           ++A  +  LM+ RG LP       L+   CK      A   L  ++++GF P+  +W  L
Sbjct: 338 DEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTL 397

Query: 491 VELICRGRKLLFAFEL 506
           +   C+  + L A EL
Sbjct: 398 IGGFCQVGRPLAAKEL 413



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 37/387 (9%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R +E+   +   T  +  +K     +N L +  +   A  +L+   +     PN  +++ 
Sbjct: 164 RAVELVDHVEK-TGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEER-NWNPNVVVYST 221

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV-- 265
           ++   CK G +  A  +  EM    +  PNL+TY+ LI GLC  GR++EA  L +EM+  
Sbjct: 222 VMDGLCKDGLVSEALGLCLEMSGKGIK-PNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKM 280

Query: 266 ------------------------SKDQI--------LPDALTYNVLIDGFCRGGKVDRA 293
                                   +K  I        +PD  TYN LID +C   ++D A
Sbjct: 281 GVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEA 340

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
            ++ E M + GC P++  YT+L++G+CK   + +A  + DEM      PD + +TTLI  
Sbjct: 341 TRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGG 400

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           FC+ GR   A EL   M + G   ++ T  IIL GLC+   + EAL +   +    + LN
Sbjct: 401 FCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLN 460

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
              Y I+L+  C  G+L  A+EL   +  +G   +      ++    K G+ + A   L 
Sbjct: 461 IVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLS 520

Query: 474 GLVEMGFKPESDSWALLVELICRGRKL 500
            + E G  P+S ++ + V+ +   R++
Sbjct: 521 NMEENGCMPDSCTYNVFVQGLVAEREI 547



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 167/331 (50%), Gaps = 2/331 (0%)

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
            +D A NF  ++   +   P+   F +L+    K     +A  ++KEM  S    P+   
Sbjct: 55  SIDEALNFF-HTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFI 113

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
            + +I+ LC          +   M+ K  + P  +T+ +LI+G C  G V RA ++++ +
Sbjct: 114 LNVVINSLCHLKLVAFGFSVLGTML-KLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV 172

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           +  G   +V  Y  L+NG CK GK  EA     +M+     P+ + Y+T+++  C+ G V
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLV 232

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            EAL L  EM  +G K ++VT+  ++ GLC  G+ +EA  +L+++   G+  +  S  I+
Sbjct: 233 SEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNIL 292

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++  C++G++ +A  ++  M+  G +P   T N L+ R C     ++A      +V  G 
Sbjct: 293 VDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGC 352

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELV 511
            P+  ++  L+   C+ + +  A  LLDE++
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEMI 383



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 178/378 (47%), Gaps = 9/378 (2%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F+  MKH++        + +  ++H     KP    ++  +N L     V    + L  +
Sbjct: 84  FIVKMKHYTT------AISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLG-T 136

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
              L L+P+   F ILI   C +G +  A E++  ++K+     ++ TY  LI+GLCK G
Sbjct: 137 MLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYR-SDVKTYGVLINGLCKMG 195

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EA+    +M  ++   P+ + Y+ ++DG C+ G V  A  +   M   G  PN+  Y
Sbjct: 196 KTSEAVGWLRKMEERNWN-PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTY 254

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L+ G C  G+ +EA  + DEM    + PD      L++  C+ G++ +A  ++  M  
Sbjct: 255 TCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMIL 314

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G   D+ T+N ++   C + +++EA  + E +   G   +  +Y  +++  C+   + K
Sbjct: 315 VGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINK 374

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+ LL  M+  GF P   T   L+   C+ G    A      + + G  P   + A++++
Sbjct: 375 AMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILD 434

Query: 493 LICRGRKLLFAFELLDEL 510
            +C+ + L  A  L   +
Sbjct: 435 GLCKSQLLSEALSLFHAM 452



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 189/372 (50%), Gaps = 5/372 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E++ +N N   Y+T++D L +         +  +M+ +  K +   +  L++   N    
Sbjct: 208 EERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRW 267

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +    +  ++  +    P L++++  +++L +  ++  A++ + +      + P+   +N
Sbjct: 268 KEAGSLLDEMMKMGV-MPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEV-PDVFTYN 325

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +C +  ++ A  V  E+  S+   P+++ Y++LI G CK     +A+ L +EM+ 
Sbjct: 326 SLIDRYCLQNQMDEATRVF-ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMI- 383

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K    PD +T+  LI GFC+ G+   AK++   M   G  PN+     +++G CK   L 
Sbjct: 384 KVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLS 443

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +F  M+   L  + + Y+ +++  C AG+++ ALEL   +  +G + ++  + I++
Sbjct: 444 EALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMI 503

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G  ++G +++A  +L  +  +G   +  +Y + +     + E+ ++I+ L +M  +GF 
Sbjct: 504 NGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFS 563

Query: 447 PHYATSNELLVR 458
              AT+ E+++ 
Sbjct: 564 VD-ATTTEMIIN 574



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 39/323 (12%)

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK---EMKKSQMSYPNLITYSTLIDGLC 249
           N  ++   N   F   +++ CK G L+S  E L     M K     P++I ++ L+  + 
Sbjct: 28  NHEIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMN-PLPSVIDFTLLLGFIV 86

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K   +  AI L +EM S   I PD    NV+I+  C         K++ F          
Sbjct: 87  KMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCH-------LKLVAF---------- 129

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
                   GF           V   M    L+P  + +T LIN  C  G V  A+EL+  
Sbjct: 130 --------GF----------SVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           +++ G ++D+ T+ +++ GLC+ GK  EA+G L K+       N   Y  V++  C+ G 
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           + +A+ L   M  +G  P+  T   L+  LC  G  ++A   L  +++MG  P+  S  +
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291

Query: 490 LVELICRGRKLLFAFELLDELVI 512
           LV+++C+  K++ A  ++  +++
Sbjct: 292 LVDVLCKEGKIMQAKSVIGFMIL 314


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 201/386 (52%), Gaps = 38/386 (9%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           K ++   +  +N+L +  ++  A++F+  S ++L +KPN   +N +I  +C RG +E A 
Sbjct: 233 KSTVYTFNIMINVLCKEGKLKKAKDFIG-SMENLGVKPNVVTYNTVIHGYCSRGRVEGAR 291

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            VL  MK   +  P+  TY +LI G+CK G+  EA  + E+M  +  +LP A+TYN LID
Sbjct: 292 MVLDIMKNRGVE-PDSYTYGSLISGMCKGGKLEEASGILEKM-KEIGLLPTAVTYNTLID 349

Query: 283 GFC-RG----------------------------------GKVDRAKKIMEFMKNNGCNP 307
           G+C +G                                  GK+D A  +++ M ++G  P
Sbjct: 350 GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVP 409

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y  L+NG+C+ G  ++A  + DEM +  ++P  + YT+LI    +  R+  A +L 
Sbjct: 410 DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLF 469

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           +++   G   D++ FN ++ G C  G ++ A  +L+++    I  ++ +Y  ++   C++
Sbjct: 470 EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCRE 529

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G++E+A ELL+ M  RG  P + + N L+    K G   DA      ++ +GF P   ++
Sbjct: 530 GKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTY 589

Query: 488 ALLVELICRGRKLLFAFELLDELVIK 513
             L++ +C+ ++   A ELL E+V K
Sbjct: 590 NALIQGLCKNQQGDLAEELLKEMVSK 615



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 161/303 (53%), Gaps = 2/303 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + + L P    +N LI  +C +G L  AF    EM +  +  P + TY+ LI  L   G+
Sbjct: 333 KEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAI-LPTVSTYNLLIHALFLEGK 391

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA  + ++M     I+PD++TYN+LI+G+CR G   +A  + + M + G  P +  YT
Sbjct: 392 MDEADGMIKDM-GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYT 450

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +L+    K  +++ A ++F+++      PD I +  LI+  C  G +D A  LLKEM +R
Sbjct: 451 SLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKR 510

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
               D VT+N ++ G CREGK+EEA  +L+++   GI  +  SY  +++   ++G++  A
Sbjct: 511 NIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDA 570

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             +   ML  GF P   T N L+  LCK    + A   L  +V  G  P+  ++  L+E 
Sbjct: 571 FTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630

Query: 494 ICR 496
           I +
Sbjct: 631 IGK 633



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 161/311 (51%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    FN ++    K    E+ + +  EM + ++    + T++ +I+ LCK G+ ++A +
Sbjct: 199 PKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIK-STVYTFNIMINVLCKEGKLKKAKD 257

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
               M     + P+ +TYN +I G+C  G+V+ A+ +++ MKN G  P+ + Y +L++G 
Sbjct: 258 FIGSM-ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGM 316

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK GKL+EA  + ++MK   L P  + Y TLI+ +C  G + +A     EM  R     +
Sbjct: 317 CKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTV 376

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N+++  L  EGK++EA GM++ +   GI  +  +Y I++N  C+ G  +KA  L   
Sbjct: 377 STYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDE 436

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P   T   L+  L K    + A      ++  G  P+   +  L++  C    
Sbjct: 437 MISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGN 496

Query: 500 LLFAFELLDEL 510
           L  AF LL E+
Sbjct: 497 LDRAFALLKEM 507



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 187/354 (52%), Gaps = 3/354 (0%)

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI-FNILIKHHCKRGT 217
           +    PS K+    L   IES    +   F + +    RL   + I F++LI+  C+   
Sbjct: 122 VVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKR 181

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            + AFE   +M K +   P + T++ ++    K  +      L+ EM  + +I     T+
Sbjct: 182 GDDAFECF-DMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF-RLKIKSTVYTF 239

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N++I+  C+ GK+ +AK  +  M+N G  PNV  Y T+++G+C  G+++ A+ V D MKN
Sbjct: 240 NIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKN 299

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             ++PD+  Y +LI+  C+ G+++EA  +L++MKE G     VT+N ++ G C +G + +
Sbjct: 300 RGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVK 359

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A G  +++    I    ++Y ++++    +G++++A  +++ M   G +P   T N L+ 
Sbjct: 360 AFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILIN 419

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             C+ G A+ A      ++  G +P   ++  L+ ++ +  ++  A +L ++++
Sbjct: 420 GYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 184/387 (47%), Gaps = 12/387 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N  TY T++       + E    VL  M     +     + +L+         
Sbjct: 263 ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYSNQHLR--LKPNT 202
           E    +  K+  I      L   +   N LI+   N+ DL + F  Y ++ +R  + P  
Sbjct: 323 EEASGILEKMKEI-----GLLPTAVTYNTLIDGYCNKGDLVKAF-GYRDEMVRRAILPTV 376

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N+LI      G ++ A  ++K+M  S +  P+ ITY+ LI+G C+ G  ++A  L +
Sbjct: 377 STYNLLIHALFLEGKMDEADGMIKDMGDSGI-VPDSITYNILINGYCRCGNAKKAFNLHD 435

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM+SK  I P  +TY  LI    +  ++  A  + E +   G +P++  +  L++G C  
Sbjct: 436 EMISK-GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCAN 494

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G L  A  +  EM    + PD + Y TL+   CR G+V+EA ELLKEMK RG + D +++
Sbjct: 495 GNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISY 554

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++ G  + G I +A  + +++   G      +Y  ++   C+  + + A ELL+ M+ 
Sbjct: 555 NTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVS 614

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAA 469
           +G  P  +T   L+  + K   + +A+
Sbjct: 615 KGITPDDSTYFSLIEGIGKVDDSSEAS 641



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 159/308 (51%), Gaps = 7/308 (2%)

Query: 212 HCKRGTLESAFEVLKE------MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           H  + T+ES    +K+      + + ++   + I +  LI   C+  R  +A E F+ M+
Sbjct: 134 HLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFD-MM 192

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +  ++P   T+N ++  F +  + +    +   M        V+ +  ++N  CKEGKL
Sbjct: 193 KEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKL 252

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           ++AK+    M+N  +KP+ + Y T+I+ +C  GRV+ A  +L  MK RG + D  T+  +
Sbjct: 253 KKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSL 312

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G+C+ GK+EEA G+LEK+   G+     +Y  +++  C KG+L KA      M+ R  
Sbjct: 313 ISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAI 372

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           LP  +T N L+  L   G  ++A   +  + + G  P+S ++ +L+   CR      AF 
Sbjct: 373 LPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFN 432

Query: 506 LLDELVIK 513
           L DE++ K
Sbjct: 433 LHDEMISK 440



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 44/274 (16%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN-LMKHFSNCSLHERVLEMFH 154
           +TY  ++  L    K +  D +++ M  ++    + I  N L+  +  C   ++   +  
Sbjct: 377 STYNLLIHALFLEGKMDEADGMIKDMG-DSGIVPDSITYNILINGYCRCGNAKKAFNLHD 435

Query: 155 KIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           ++  I++  +P+L   ++ + +L + N++  A +  +   +     P+  +FN LI  HC
Sbjct: 436 EM--ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE-GASPDLIMFNALIDGHC 492

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM--------- 264
             G L+ AF +LKEM K  +  P+ +TY+TL+ G C+ G+  EA EL +EM         
Sbjct: 493 ANGNLDRAFALLKEMDKRNI-VPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551

Query: 265 --------------------VSKDQIL-----PDALTYNVLIDGFCRGGKVDRAKKIMEF 299
                                 +D++L     P  LTYN LI G C+  + D A+++++ 
Sbjct: 552 ISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKE 611

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           M + G  P+   Y +L+ G    GK+ ++ E  D
Sbjct: 612 MVSKGITPDDSTYFSLIEGI---GKVDDSSEASD 642


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 197/388 (50%), Gaps = 11/388 (2%)

Query: 124 ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
           ETC     +FL L +      L+    EMF       R   ++   +  +N+L +  ++ 
Sbjct: 193 ETCNDMLSLFLKLNRMEMAWVLYA---EMFR-----LRISSTVYTFNIMVNVLCKEGKLK 244

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
            A+ F+ +  + L  KPN   +N +I  +  RG +E A  +L  M+   +  P+  TY +
Sbjct: 245 KAREFIGFM-EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE-PDSYTYGS 302

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LI G+CK GR  EA  LF++MV +  ++P+A+TYN LIDG+C  G ++RA    + M   
Sbjct: 303 LISGMCKEGRLEEASGLFDKMV-EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 361

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P+V  Y  L++    EG++ EA ++  EM+   + PD I Y  LIN + R G   +A
Sbjct: 362 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKA 421

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            +L  EM  +G +   VT+  ++  L R  +++EA  + EK+   G+  +   +  +++ 
Sbjct: 422 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDG 481

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C  G +E+A  LL+ M  +   P   T N L+   C+ G  E+A + L  +   G KP+
Sbjct: 482 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 541

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             S+  L+    R   +  AF + DE++
Sbjct: 542 HISYNTLISGYGRRGDIKDAFRVRDEML 569



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 162/295 (54%), Gaps = 2/295 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N LI  +C +G LE AF    EM K  +  P++ TY+ L+  L   GR  EA
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI-MPSVSTYNLLVHALFMEGRMGEA 386

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ +EM  K  I+PDA+TYN+LI+G+ R G   +A  +   M + G  P    YT+L+ 
Sbjct: 387 DDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 445

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              +  +++EA ++F+++ +  + PD I +  +++  C  G V+ A  LLKEM  +    
Sbjct: 446 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 505

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VTFN ++ G CREGK+EEA  +L+++   GI  +  SY  +++   ++G+++ A  + 
Sbjct: 506 DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVR 565

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             ML  GF P   T N L+  LCK    + A   L  +V  G  P+  ++  L+E
Sbjct: 566 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 620



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 188/354 (53%), Gaps = 9/354 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLE 219
           KP++ + +T ++       ++ A+  L      +R+K   P++  +  LI   CK G LE
Sbjct: 259 KPNVVSYNTIIHGYSSRGNIEGARRIL----DAMRVKGIEPDSYTYGSLISGMCKEGRLE 314

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  +  +M +  +  PN +TY+TLIDG C  G    A    +EMV K  I+P   TYN+
Sbjct: 315 EASGLFDKMVEIGL-VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG-IMPSVSTYNL 372

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L+      G++  A  +++ M+  G  P+   Y  L+NG+ + G  ++A ++ +EM +  
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           ++P  + YT+LI    R  R+ EA +L +++ ++G   D++ FN ++ G C  G +E A 
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L+++    +  ++ ++  ++   C++G++E+A  LL  M  RG  P + + N L+   
Sbjct: 493 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 552

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + G  +DA      ++ +GF P   ++  L++ +C+ ++   A ELL E+V K
Sbjct: 553 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 195/365 (53%), Gaps = 11/365 (3%)

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLI----ESNQVDLA-QNFLKYSNQHLRLKPNTCIF 205
           E+F ++  ++R++ S+K+ S   +LL+    E  + D A + F     + +  K  TC  
Sbjct: 140 ELFDEL-TLSRDRLSVKS-SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETC-- 195

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N ++    K   +E A+ +  EM + ++S   + T++ +++ LCK G+ ++A E F   +
Sbjct: 196 NDMLSLFLKLNRMEMAWVLYAEMFRLRIS-STVYTFNIMVNVLCKEGKLKKARE-FIGFM 253

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
                 P+ ++YN +I G+   G ++ A++I++ M+  G  P+ + Y +L++G CKEG+L
Sbjct: 254 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 313

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EA  +FD+M    L P+ + Y TLI+ +C  G ++ A     EM ++G    + T+N++
Sbjct: 314 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 373

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +  L  EG++ EA  M++++   GI  +  +Y I++N   + G  +KA +L   ML +G 
Sbjct: 374 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGI 433

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P + T   L+  L +    ++A      +++ G  P+   +  +V+  C    +  AF 
Sbjct: 434 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFM 493

Query: 506 LLDEL 510
           LL E+
Sbjct: 494 LLKEM 498



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 150/286 (52%), Gaps = 1/286 (0%)

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           + + ++S  + I +  L+   C+  R  EA + F  M+ +  I+P   T N ++  F + 
Sbjct: 147 LSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFY-MMKEKGIVPKIETCNDMLSLFLKL 205

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            +++ A  +   M     +  V+ +  ++N  CKEGKL++A+E    M+    KP+ + Y
Sbjct: 206 NRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSY 265

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            T+I+ +   G ++ A  +L  M+ +G + D  T+  ++ G+C+EG++EEA G+ +K+  
Sbjct: 266 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 325

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  N  +Y  +++  C KG+LE+A      M+ +G +P  +T N L+  L   G   +
Sbjct: 326 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 385

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A   +  + + G  P++ ++ +L+    R      AF+L +E++ K
Sbjct: 386 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK 431



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 45/339 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   ++ TY +++  + +  + E    +  +M       +   +  L+  + N    ER
Sbjct: 291 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 350

Query: 149 VL----EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
                 EM  K        PS+   +  ++ L    ++  A + +K   +   + P+   
Sbjct: 351 AFSYRDEMVKK-----GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK-GIIPDAIT 404

Query: 205 FNILIKHHCKRGTLESAFEVLKEM-----KKSQMSY------------------------ 235
           +NILI  + + G  + AF++  EM     + + ++Y                        
Sbjct: 405 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 464

Query: 236 -----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
                P++I ++ ++DG C NG    A  L +EM  +  + PD +T+N L+ G CR GKV
Sbjct: 465 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKV 523

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           + A+ +++ MK  G  P+  +Y TL++G+ + G +++A  V DEM +    P  + Y  L
Sbjct: 524 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNAL 583

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           I C C+    D A ELLKEM  +G   D  T+  ++ G+
Sbjct: 584 IKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 212/434 (48%), Gaps = 8/434 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EIFN + E+ G   N ATY+T+++ L    +       + +MT          F   +
Sbjct: 282 AFEIFNRMDEE-GCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPI 340

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               +    E   ++F     I  +K   K        LI   +V      L +      
Sbjct: 341 VALCDMGRIEDAWKIF-----IDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDG 395

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PNT  +N L+    +   ++SA  V   M K     PN  +Y+ LI G C  G   +A
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGK-HGCLPNTSSYNELIRGYCTIGDTEKA 454

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + +   M+ K +  P  +TYN++I G+C  G  D A +++E MK NGC P+ ++YT L++
Sbjct: 455 MSMLTNML-KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELIS 513

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK  K++ A  +F+EM +  L P+ + YT LI+ +C+  ++D A  +L+ MK  GC+ 
Sbjct: 514 GFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRP 573

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ T+N+++ GL ++     A  + + +  + I  +  +Y  V+N  C  G +  A+E+ 
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G LP+  T + L+  L + G  E+A      L + G  P+  ++  ++E+    
Sbjct: 634 NKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMS 693

Query: 498 RKLLFAFELLDELV 511
            K+  AF+ L E++
Sbjct: 694 GKVDRAFDFLGEMI 707



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 183/390 (46%), Gaps = 40/390 (10%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           SLI  ++  + A+ +F+ +S + G   N  TY  +++ L    + ++   V   M    C
Sbjct: 373 SLISGQRVSRMAIGLFHRMS-RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGC 431

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
             +   +  L++ +      E+ + M                                  
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEKAMSML--------------------------------T 459

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
           N LK      R  P    +NI+IK +C  G  + A  VL E+ K+    P+  +Y+ LI 
Sbjct: 460 NMLKG-----RPTPTLVTYNIIIKGYCDSGDTDVAIRVL-ELMKANGCQPDEWSYTELIS 513

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G CK  +   A  +F EM+ +  + P+ +TY  LI G+C+  K+D A +++E MK +GC 
Sbjct: 514 GFCKISKMELASGMFNEMMDRG-LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           PNV  Y  L++G  K+     A+E+   M    + PD + Y+T+IN  C  G +  ALE+
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             +M + GC  ++ T++ ++  L +EG++EEA  M  +L   G+  ++ +Y  ++     
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVM 692

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELL 456
            G++++A + L  M+  G  P   T + L+
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQTYDVLI 722



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 202/424 (47%), Gaps = 7/424 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   N   Y ++++ L +       ++++ ++     K     + +++  +      +
Sbjct: 221 REGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLD 280

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              E+F+++     E P+    ST +N L  S +V+ A +F+    +H  L P    F  
Sbjct: 281 SAFEIFNRMDEEGCE-PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVL-PTVHTFTA 338

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            I   C  G +E A+++  +MKK     PN+ TY++LI G       R AI LF  M S+
Sbjct: 339 PIVALCDMGRIEDAWKIFIDMKKKGCK-PNVYTYTSLISG---QRVSRMAIGLFHRM-SR 393

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D ++P+ +TYN L++      ++D A  +   M  +GC PN  +Y  L+ G+C  G  ++
Sbjct: 394 DGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEK 453

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +   M      P  + Y  +I  +C +G  D A+ +L+ MK  GC+ D  ++  ++ 
Sbjct: 454 AMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELIS 513

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G C+  K+E A GM  ++   G+  N+ +Y  +++  C+  +L+ A  +L  M   G  P
Sbjct: 514 GFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRP 573

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T N L+  L K      A      ++E    P+  +++ ++  +C    +  A E+ 
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633

Query: 508 DELV 511
           +++V
Sbjct: 634 NKMV 637



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 144/303 (47%), Gaps = 33/303 (10%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           L TY+TL+  L K       ++ + +++ ++ + P+ L YN +I+  C+ G V  A+ I+
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQIL-REGLQPNLLIYNSVINALCKDGNVRDAESII 251

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             +  +G  P+ F YT+++ G+C+   L  A E+F+ M     +P+   Y+TLIN  C +
Sbjct: 252 NKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNS 311

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE-------------------- 397
           GRV+EAL+ + EM   G    + TF   +  LC  G+IE+                    
Sbjct: 312 GRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY 371

Query: 398 ------------ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
                       A+G+  ++  DG+  N  +Y  ++N   +  E++ A+ +  +M   G 
Sbjct: 372 TSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGC 431

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           LP+ ++ NEL+   C  G  E A   L  +++    P   ++ ++++  C       A  
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIR 491

Query: 506 LLD 508
           +L+
Sbjct: 492 VLE 494



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 6/207 (2%)

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL---LKPDT 344
            ++ +A   ++     G    +F YTTL+    +  KL     V D     L   L+P+ 
Sbjct: 172 AEMTQALNYLDMFSQRGPKMGLFTYTTLL---IQLNKLNMTSTVMDRYHQILREGLQPNL 228

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + Y ++IN  C+ G V +A  ++ ++ + G K D  T+  ++ G CR   ++ A  +  +
Sbjct: 229 LIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNR 288

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +  +G   N A+Y  ++N  C  G + +A++ +  M   G LP   T    +V LC  G 
Sbjct: 289 MDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGR 348

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLV 491
            EDA      + + G KP   ++  L+
Sbjct: 349 IEDAWKIFIDMKKKGCKPNVYTYTSLI 375



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 80/387 (20%), Positives = 161/387 (41%), Gaps = 27/387 (6%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           + A  +FN + + +G   N  TY  ++    + +K +    +L +M    C+ +   + N
Sbjct: 522 ELASGMFNEMMD-RGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTY-N 579

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           ++ H      +    E   K+    +  P +   ST +N L  +  + LA        +H
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L PN   ++ LI+   + G +E A E+  E+KK Q   P+ +TY  +I+    +G+  
Sbjct: 640 GCL-PNLHTYSSLIQALGQEGRVEEAEEMFSELKK-QGLIPDEVTYVKMIEVCVMSGKVD 697

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN---- 311
            A +   EM++     P   TY+VLI G        +   +      +  +  + N    
Sbjct: 698 RAFDFLGEMINAG-CQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVI 756

Query: 312 ------------------YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
                             Y  L++   + G+  EA  ++  M +    P+   Y   +  
Sbjct: 757 SVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLIS 816

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
             RA +VD A+++ K M ++ C+  +  +  ++  LC+  + +EA  + EK+    +  +
Sbjct: 817 LLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNAD 876

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLM 440
           +  + I++N     G  +  +E L +M
Sbjct: 877 EIVWTILINGLLGAGYKDLCMEFLHIM 903



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 1/131 (0%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y  L+  L ++GR+ EA  L+  MVS+ Q  P+  TY   +    R  KVD A  + + M
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQC-PNQDTYKHFLISLLRALKVDLAMDVFKHM 833

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
            +  C  ++  Y  L+   C+  + +EA+ VF++M +  L  D I +T LIN    AG  
Sbjct: 834 SDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYK 893

Query: 361 DEALELLKEMK 371
           D  +E L  M+
Sbjct: 894 DLCMEFLHIME 904



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 78/357 (21%), Positives = 143/357 (40%), Gaps = 29/357 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++ A IS    +++  CA  +   + ++ G   N  TY  ++  L +   F   + + +
Sbjct: 541 VTYTALISGYCKDEKLDCAARMLERM-KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 599

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLI 177
            M  E        +  ++    N       LEMF+K+  H      P+L   S+ +  L 
Sbjct: 600 VMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCL---PNLHTYSSLIQALG 656

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +  +V+ A+       +   L P+   +  +I+     G ++ AF+ L EM  +    P 
Sbjct: 657 QEGRVEEAEEMFSELKKQ-GLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQ-PT 714

Query: 238 LITYSTLIDGLCKNGRFREAIELF---------EEMVSKD--QILPDALT---------- 276
           L TY  LI GL     + + + L          +++++KD   +L   L           
Sbjct: 715 LQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQL 774

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y+ L+    R G+   A  +   M +    PN   Y   +    +  K+  A +VF  M 
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           +   +    GY  LI   C+  R  EA  + ++M  R   AD + + I++ GL   G
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A +V K M   +    +L  Y  LI  LC+  R +EA  +FE+M+S+  +  D + + +L
Sbjct: 826 AMDVFKHMSDQRCEL-HLTGYKELICTLCQLHRRKEARFVFEKMLSR-ALNADEIVWTIL 883

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           I+G    G  D   + +  M+ N  NP+    T L     KE
Sbjct: 884 INGLLGAGYKDLCMEFLHIMETNRRNPSSHARTILAREALKE 925



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 36/71 (50%)

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +L  G  P+    N ++  LCK G   DA   +  + + G KP++ ++  ++   CR R 
Sbjct: 219 ILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRD 278

Query: 500 LLFAFELLDEL 510
           L  AFE+ + +
Sbjct: 279 LDSAFEIFNRM 289


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 188/348 (54%), Gaps = 7/348 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   ST +N   +  +V+ A   L +  + L + PN   +N LI   CK G L+ AF 
Sbjct: 311 PDVYLFSTAINAFCKGGKVEDAIQ-LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFR 369

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
             ++M K  ++   LITYS LI+GL K  +F EA  + +E + K    P+ + YN LIDG
Sbjct: 370 FKEKMVKDGVN-ATLITYSVLINGLMKLEKFNEANSVLKETLEKG-FTPNEVVYNTLIDG 427

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLK 341
           +C+ G +  A +I   M + G NPN     +++ GFCK G++++A+ + +EM  + F + 
Sbjct: 428 YCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 487

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P    +TT+I+  C   R + AL  L+EM  R  + +      ++GGLC+EGK  +A+ +
Sbjct: 488 PG--AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 545

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             +L   G   N  +   +++  C+ G +++A+ LL+ ML RGF+    T N L+   CK
Sbjct: 546 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 605

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            G  E+       +V+ G +P++ ++ LL+  +CR  KL  A  L +E
Sbjct: 606 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 653



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 203/386 (52%), Gaps = 10/386 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            +GF+ N   + TI+  L    +FE+    LR+M     + ++G+   L+        H 
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540

Query: 148 RVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
             +E++ ++     EK    +L   +  ++ L ++  +  A   LK   +      +   
Sbjct: 541 DAVELWFRL----LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER-GFVLDKIT 595

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   CK G +E  F++  EM K  +  P+  TY+ LI G+C+ G+  EA+ L+ E 
Sbjct: 596 YNTLISGCCKEGKVEEGFKLRGEMVKQGIE-PDTFTYNLLIHGMCRIGKLDEAVNLWNEC 654

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            S+D ++P+  TY V+IDG+C+  K++  +K+   +       N   Y TL+  +C+ G 
Sbjct: 655 KSRD-LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 713

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             EA ++ D+M++  + P T  Y++LI+  C  GR+++A  L+ EM++ G   ++V +  
Sbjct: 714 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 773

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++GG C+ G++++ + +L+++    I+ NK +Y ++++   + G+++ A +LL  M+ +G
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 833

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAI 470
            +P   T N L    CK G  E+  +
Sbjct: 834 IVPDTVTYNVLTNGFCKEGKIEEGKL 859



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 208/417 (49%), Gaps = 12/417 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG N N+ T  +I+    +  + E  + +L +M       + G F  ++      S  E
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTC 203
             L    ++  +   +P+   ++T +  L +    S+ V+L    L+          N  
Sbjct: 506 SALRFLREML-LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG-----FGANLV 559

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
             N LI   CK G ++ A  +LK+M +      + ITY+TLI G CK G+  E  +L  E
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVL-DKITYNTLISGCCKEGKVEEGFKLRGE 618

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           MV K  I PD  TYN+LI G CR GK+D A  +    K+    PNV+ Y  +++G+CK  
Sbjct: 619 MV-KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 677

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K++E +++F E+    L+ +++ Y TLI  +CR G   EA +L  +M+ +G      T++
Sbjct: 678 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 737

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G+C  G++E+A  +++++  +G+  N   Y  ++   C+ G+++K + +L+ M   
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              P+  T   ++    K+G  + AA  L  +V  G  P++ ++ +L    C+  K+
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKI 854



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 5/310 (1%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           TC F  L+    K   LE ++ V + M+  Q   P++  +ST I+  CK G+  +AI+LF
Sbjct: 281 TCTF--LLSSLVKANELEKSYWVFETMR--QGVSPDVYLFSTAINAFCKGGKVEDAIQLF 336

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            +M  K  + P+ +TYN LI G C+ G +D A +  E M  +G N  +  Y+ L+NG  K
Sbjct: 337 FDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             K  EA  V  E       P+ + Y TLI+ +C+ G + +AL +  +M  +G   + VT
Sbjct: 396 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 455

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
            N I+ G C+ G++E+A  +LE++   G  +N  ++  ++++ C     E A+  LR ML
Sbjct: 456 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 515

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            R   P+      L+  LCK G   DA    F L+E GF     +   L+  +C+   + 
Sbjct: 516 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 575

Query: 502 FAFELLDELV 511
            A  LL +++
Sbjct: 576 EAVRLLKKML 585



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 203/435 (46%), Gaps = 22/435 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF------- 140
           +KGF  N   Y T++D   +         +   M  +    +     ++++ F       
Sbjct: 411 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQME 470

Query: 141 -SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-L 198
            + C L E +   F  I+P         A +T ++ L  +++ + A  FL+     LR +
Sbjct: 471 QAECILEEMLSRGF-SINP--------GAFTTIIHWLCMNSRFESALRFLR--EMLLRNM 519

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN  +   L+   CK G    A E+   + +      NL+T + LI GLCK G  +EA+
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG-ANLVTTNALIHGLCKTGNMQEAV 578

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L ++M+ +  +L D +TYN LI G C+ GKV+   K+   M   G  P+ F Y  L++G
Sbjct: 579 RLLKKMLERGFVL-DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 637

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+ GKL EA  +++E K+  L P+   Y  +I+ +C+A +++E  +L  E+  +  + +
Sbjct: 638 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 697

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            V +N ++   CR G   EA  + + +   GI    A+Y  +++  C  G +E A  L+ 
Sbjct: 698 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M   G LP+      L+   CK G  +     L  +      P   ++ ++++   +  
Sbjct: 758 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSG 817

Query: 499 KLLFAFELLDELVIK 513
            +  A +LL E+V K
Sbjct: 818 DMKTAAKLLHEMVGK 832



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 206/428 (48%), Gaps = 14/428 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G N    TY+ +++ L + +KF   ++VL++   +    +E ++  L+  +  C +  
Sbjct: 376 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGY--CKMGN 433

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLK-YSNQHLRLKPNT 202
               +  +   +++    +   S  LN +I+      Q++ A+  L+   ++   + P  
Sbjct: 434 LGDALRIRGDMVSK---GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA 490

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             F  +I   C     ESA   L+EM    M  PN    +TL+ GLCK G+  +A+EL+ 
Sbjct: 491 --FTTIIHWLCMNSRFESALRFLREMLLRNMR-PNDGLLTTLVGGLCKEGKHSDAVELWF 547

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            ++ K     + +T N LI G C+ G +  A ++++ M   G   +   Y TL++G CKE
Sbjct: 548 RLLEKG-FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 606

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK++E  ++  EM    ++PDT  Y  LI+  CR G++DEA+ L  E K R    ++ T+
Sbjct: 607 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 666

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
            +++ G C+  KIEE   +  +L    + LN   Y  ++   C+ G   +A +L   M  
Sbjct: 667 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 726

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G  P  AT + L+  +C  G  EDA   +  + + G  P    +  L+   C+  ++  
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786

Query: 503 AFELLDEL 510
              +L E+
Sbjct: 787 VVNVLQEM 794



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 153/299 (51%), Gaps = 8/299 (2%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLC---KNGRFREAIELFEEMVSKDQILPDA 274
           + SA   L E+ +S ++   +     LI   C   +N  FR AI +F  + +K  + P  
Sbjct: 224 IASAMADLNEVGESGVA---VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKG-VFPTV 279

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            T   L+    +  +++++  + E M+  G +P+V+ ++T +N FCK GK+++A ++F +
Sbjct: 280 KTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFD 338

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M+   + P+ + Y  LI+  C+ G +DEA    ++M + G  A ++T+++++ GL +  K
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 398

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
             EA  +L++    G   N+  Y  +++  C+ G L  A+ +   M+ +G  P+  T N 
Sbjct: 399 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           ++   CK G  E A   L  ++  GF     ++  ++  +C   +   A   L E++++
Sbjct: 459 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 517



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 107/182 (58%), Gaps = 5/182 (2%)

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           F +   Q+L L  N+ ++N LI+ +C+ G    AF++  +M+   +  P   TYS+LI G
Sbjct: 686 FTELLTQNLEL--NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP-PTTATYSSLIHG 742

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           +C  GR  +A  L +EM  K+ +LP+ + Y  LI G+C+ G++D+   +++ M +   +P
Sbjct: 743 MCNIGRMEDAKCLIDEM-RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHP 801

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N   YT +++G+ K G ++ A ++  EM    + PDT+ Y  L N FC+ G+++E  +LL
Sbjct: 802 NKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG-KLL 860

Query: 368 KE 369
            E
Sbjct: 861 AE 862



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 11/152 (7%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P T  ++ LI   C  G +E A  ++ EM+K  +  PN++ Y+ LI G CK G+  + 
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL-LPNVVCYTALIGGYCKLGQMDKV 787

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + + +EM S D I P+ +TY V+IDG+ + G +  A K++  M   G  P+   Y  L N
Sbjct: 788 VNVLQEMSSYD-IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 846

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           GFCKEGK++E K         LL  D +G+ +
Sbjct: 847 GFCKEGKIEEGK---------LLAEDGVGFNS 869


>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 199/364 (54%), Gaps = 5/364 (1%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           LI  + +P  A EIF+  S Q  F H+ +++  ++ KL   ++F  +  +L ++  E   
Sbjct: 20  LIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMRLKSEQYS 79

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI-ESNQVDLAQ 186
            +  +F ++++ +   +L ++ L+ FH +      KP  K ++  L LL+   N +  A 
Sbjct: 80  INPSLFSDIIEIYGEANLPDQALKTFHSMLQF-HSKPLPKHLNXLLQLLVSHRNYIRPAF 138

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
           +  K ++++  + P+T  +NIL+   C  G L  A+ +  +M K  ++ P++ +Y  L+ 
Sbjct: 139 DLFKSAHRY-GVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVA-PDVESYRILMQ 196

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           GLC+  +   A++L E+M++K  + PDAL+Y  L++  CR  K+  A K++  MK  GCN
Sbjct: 197 GLCRKSQVNRAVDLLEDMLNKGYV-PDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCN 255

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ +Y T++ GFC+EG+  +A +V ++M +    P+ + Y TL++  C  G  DEA   
Sbjct: 256 PDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNY 315

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           ++EM  +G       F+ ++ G C  GK+EEA  +L ++   G   +  ++  ++   C+
Sbjct: 316 VEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRICE 375

Query: 427 KGEL 430
             +L
Sbjct: 376 VDKL 379



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 176/357 (49%), Gaps = 18/357 (5%)

Query: 163 KPSLKAISTCLNLLI----ESNQVDLAQNFLKYSNQHLRLKP-----NTCIFNILIKHHC 213
           +P+ K   +  ++LI     + Q  L Q+ L      +RLK      N  +F+ +I+ + 
Sbjct: 40  QPNFKHSYSSFHILILKLGWARQFSLMQDLL------MRLKSEQYSINPSLFSDIIEIYG 93

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF-REAIELFEEMVSKDQILP 272
           +    + A +    M +   S P     + L+  L  +  + R A +LF+    +  + P
Sbjct: 94  EANLPDQALKTFHSMLQFH-SKPLPKHLNXLLQLLVSHRNYIRPAFDLFKS-AHRYGVSP 151

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D  +YN+L+  FC  G +  A  +   M      P+V +Y  LM G C++ ++  A ++ 
Sbjct: 152 DTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLL 211

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           ++M N    PD + YTTL+N  CR  ++ EA +LL  MK +GC  DIV +N ++ G CRE
Sbjct: 212 EDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCRE 271

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G+  +A  +LE +  +G   N  SY  +++  C +G  ++A   +  ML +GF PH++  
Sbjct: 272 GRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVF 331

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
           + L+   C  G  E+A   L  ++  G    +++W  ++  IC   KL+    + DE
Sbjct: 332 HALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDE 388



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 2/145 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N +I   C+ G    A +VL++M  +  S PNL++Y TL+ GLC  G + EA  
Sbjct: 256 PDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCS-PNLMSYGTLVSGLCDQGLYDEAKN 314

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             EEM+SK    P    ++ LI+GFC  GK++ A +++  M  +G   +   +  ++   
Sbjct: 315 YVEEMLSKG-FSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRI 373

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+  KL   + +FDE     + P+T
Sbjct: 374 CEVDKLVRMENIFDEXLKLEITPNT 398



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 3/206 (1%)

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC-RAGRVDEAL 364
           NP++F  + ++  + +     +A + F  M  F  KP       L+         +  A 
Sbjct: 81  NPSLF--SDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIRPAF 138

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +L K     G   D  ++NI++   C  G +  A  +  +++   +  +  SYRI++   
Sbjct: 139 DLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGL 198

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+K ++ +A++LL  ML +G++P   +   LL  LC+    ++A   L  +   G  P+ 
Sbjct: 199 CRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDI 258

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
             +  ++   CR  + L A ++L+++
Sbjct: 259 VHYNTVILGFCREGRXLDACKVLEDM 284


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 214/439 (48%), Gaps = 21/439 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM---------------TYETCKFHEGI 132
           + GF H+  +Y  +   L   + +   ++VL++M               T   C    G+
Sbjct: 3   RNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGV 62

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F  L     +  + E  ++ F K+    R  P  ++ +  L+   +  + D  + F K  
Sbjct: 63  FDALFSVLIDLGMLEEAIQCFSKMKRF-RVFPKTRSCNGLLHRFAKLGKTDDVKRFFK-D 120

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                 +P    +NI+I   CK G +E+A  + +EMK   +  P+ +TY+++IDG  K G
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL-VPDTVTYNSMIDGFGKVG 179

Query: 253 RFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           R  + +  FEEM  KD    PD +TYN LI+ FC+ GK+    +    MK NG  PNV +
Sbjct: 180 RLDDTVCFFEEM--KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+TL++ FCKEG +Q+A + + +M+   L P+   YT+LI+  C+ G + +A  L  EM 
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           + G + ++VT+  ++ GLC   +++EA  +  K+   G+  N ASY  +++   +   ++
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +A+ELL  +  RG  P        +  LC     E A + +  + E G K  S  +  L+
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417

Query: 492 ELICRGRKLLFAFELLDEL 510
           +   +         LLDE+
Sbjct: 418 DAYFKSGNPTEGLHLLDEM 436



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 224/462 (48%), Gaps = 6/462 (1%)

Query: 51  VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
           + A  R    ++   I  +  E + + A  +F  + + +G   +  TY +++D   +  +
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
            +       +M    C+     +  L+  F         LE + ++      KP++ + S
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG-NGLKPNVVSYS 239

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           T ++   +   +  A  F     + + L PN   +  LI  +CK G L  AF +  EM +
Sbjct: 240 TLVDAFCKEGMMQQAIKFY-VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             + + N++TY+ LIDGLC   R +EA ELF +M +   ++P+  +YN LI GF +   +
Sbjct: 299 VGVEW-NVVTYTALIDGLCDAERMKEAEELFGKMDTAG-VIPNLASYNALIHGFVKAKNM 356

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           DRA +++  +K  G  P++  Y T + G C   K++ AK V +EMK   +K +++ YTTL
Sbjct: 357 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 416

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD-G 409
           ++ + ++G   E L LL EMKE   +  +VTF +++ GLC+   + +A+    ++  D G
Sbjct: 417 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 476

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N A +  +++  C+  ++E A  L   M+ +G +P       L+    K G   +A 
Sbjct: 477 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 536

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                + E+G K +  ++  LV  +    +L  A   L+E++
Sbjct: 537 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 578



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 172/353 (48%), Gaps = 5/353 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY +++D   +         +  +M     +++   +  L+    +    +  
Sbjct: 265 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 324

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E+F K+       P+L + +  ++  +++  +D A   L    +   +KP+  ++   I
Sbjct: 325 EELFGKMD-TAGVIPNLASYNALIHGFVKAKNMDRALELLN-ELKGRGIKPDLLLYGTFI 382

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C    +E+A  V+ EMK+  +   +LI Y+TL+D   K+G   E + L +EM   D 
Sbjct: 383 WGLCSLEKIEAAKVVMNEMKECGIKANSLI-YTTLMDAYFKSGNPTEGLHLLDEMKELD- 440

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEA 328
           I    +T+ VLIDG C+   V +A      + N+ G   N   +T +++G CK+ +++ A
Sbjct: 441 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 500

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +F++M    L PD   YT+L++   + G V EAL L  +M E G K D++ +  ++ G
Sbjct: 501 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 560

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           L    ++++A   LE++  +GI+ ++     VL    + G +++A+EL   ++
Sbjct: 561 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLM 613



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 144/312 (46%), Gaps = 3/312 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  ++D L   ++ +  + +  +M       +   +  L+  F      +
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R LE+ +++      KP L    T +  L    +++ A+  +    +   +K N+ I+  
Sbjct: 358 RALELLNELKG-RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN-EMKECGIKANSLIYTT 415

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+  + K G       +L EMK+  +    ++T+  LIDGLCKN    +A++ F  + + 
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEV-TVVTFCVLIDGLCKNKLVSKAVDYFNRISND 474

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             +  +A  +  +IDG C+  +V+ A  + E M   G  P+   YT+LM+G  K+G + E
Sbjct: 475 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 534

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  + D+M    +K D + YT+L+       ++ +A   L+EM   G   D V    +L 
Sbjct: 535 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 594

Query: 388 GLCREGKIEEAL 399
                G I+EA+
Sbjct: 595 KHYELGCIDEAV 606


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 215/433 (49%), Gaps = 25/433 (5%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I+     SL     +P  AL+    +S+   F HN  +YA++L  +  +K    V  ++ 
Sbjct: 66  ITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKIIV 125

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
            M        + +F               V ++  K+      K SLK  +  L LL   
Sbjct: 126 SMIKCCYSAPDALF---------------VSDICRKMSKDDITKLSLKCYNELLTLLARF 170

Query: 180 NQVD-LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
             VD + Q + +   + + +   T  FN++I  +CK G ++ A + + +M ++ +S P+ 
Sbjct: 171 GLVDEMNQLYTEMLEEFVSMDIYT--FNLMINVYCKMGFVKEAKQFMCKMIQAGLS-PDY 227

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
            T ++ I G C++     A  +FEEM +++++     +YN LI G C  G++D A  +  
Sbjct: 228 FTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV-----SYNQLIHGLCEAGRIDEAVSLFV 282

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            MK++ C PNV+ YT L+ G C++  + +A  + DEM    L PD I Y +LI   CRAG
Sbjct: 283 RMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAG 341

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            +D A  LL  MKERG   D  T+   +  LC+  ++EEA  + + L  +G+  N   Y 
Sbjct: 342 HLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYS 401

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           ++++  C+ G++++A  L   ML +   P+  T N L+  LC AG  ++A      +V+M
Sbjct: 402 VLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKM 461

Query: 479 GFKPESDSWALLV 491
           G KP   ++ +L+
Sbjct: 462 GLKPTVYTFNILI 474



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 166/310 (53%), Gaps = 3/310 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N LI   C+ G ++ A  +   MK     YPN+ TY+ LI GLC+     +A+ L
Sbjct: 257 NEVSYNQLIHGLCEAGRIDEAVSLFVRMK-DDCCYPNVYTYTALIKGLCRK-NVHKAMGL 314

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM+ ++ ++PD +TYN LI G CR G +D A +++  MK  G  P+   Y   ++  C
Sbjct: 315 LDEMLERN-LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLC 373

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  +++EA+ +FD +    +  + I Y+ LI+ +C+ G+VDEA  L ++M  + C  +  
Sbjct: 374 KSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAY 433

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TFN ++ GLC  G ++EAL + +++   G+     ++ I++    ++G+ + A + L+ M
Sbjct: 434 TFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKM 493

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           +  G  P   T N  +   C AG  ++A   +  + E G  P+  ++  L++   +    
Sbjct: 494 MSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLT 553

Query: 501 LFAFELLDEL 510
             AF++L  +
Sbjct: 554 YSAFDVLKSM 563



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 168/342 (49%), Gaps = 31/342 (9%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N LI   C+ G L+SA+ +L  MK+  +  P+  TY   ID LCK+ R  EA
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGL-VPDQRTYGCFIDFLCKSNRVEEA 381

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+ + +++ +  + + Y+VLIDG+C+ GKVD A  + E M +  C+PN + +  L++
Sbjct: 382 RRLFDSL-TEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIH 440

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  G L+EA  +FD+M    LKP    +  LI    + G  D+A + L++M   G K 
Sbjct: 441 GLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKP 500

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              T+N  +   C  GK++EA  M+ ++  +G+  +  +Y  ++    + G    A ++L
Sbjct: 501 VARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVL 560

Query: 438 RLMLCRGFLPHYATSNELLVRLC-------KAG---------------------MAEDAA 469
           + M      P + T   L+ +L        K+G                     M  D  
Sbjct: 561 KSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIV 620

Query: 470 IALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           I LF  +E  G  P+S  +  L+  IC+   L  A +LLD++
Sbjct: 621 IELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQM 662



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 150/293 (51%), Gaps = 3/293 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  LIK  C++  +  A  +L EM +  +  P+LITY++LI G C+ G    A  
Sbjct: 291 PNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNL-VPDLITYNSLIAGQCRAGHLDSAYR 348

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M  +  ++PD  TY   ID  C+  +V+ A+++ + +   G + NV  Y+ L++G+
Sbjct: 349 LLSLMKERG-LVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGY 407

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK GK+ EA  +F++M +    P+   +  LI+  C AG + EAL L  +M + G K  +
Sbjct: 408 CKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTV 467

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TFNI++G + ++G  ++A   L+K+   G      +Y   +   C  G++++A +++  
Sbjct: 468 YTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQ 527

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           M   G  P   T   L+    K G+   A   L  + +   +P   ++  L++
Sbjct: 528 MKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIK 580



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 155/291 (53%), Gaps = 6/291 (2%)

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++ ++M K  ++  +L  Y+ L+  L + G   E  +L+ EM+ ++ +  D  T+N++I+
Sbjct: 142 DICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEML-EEFVSMDIYTFNLMIN 200

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            +C+ G V  AK+ M  M   G +P+ F  T+ + G+C+   +  A  VF+EM N     
Sbjct: 201 VYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN----R 256

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y  LI+  C AGR+DEA+ L   MK+  C  ++ T+  ++ GLCR+  + +A+G+L
Sbjct: 257 NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLL 315

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +++    +  +  +Y  ++   C+ G L+ A  LL LM  RG +P   T    +  LCK+
Sbjct: 316 DEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKS 375

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              E+A      L E G       +++L++  C+  K+  A  L ++++ K
Sbjct: 376 NRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 151/307 (49%), Gaps = 7/307 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+    + G ++   ++  EM +  +S  ++ T++ +I+  CK G  +EA +   +M
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSM-DIYTFNLMINVYCKMGFVKEAKQFMCKM 218

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + +  + PD  T    I G+CR   VD A ++ E M N     N  +Y  L++G C+ G+
Sbjct: 219 I-QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGR 273

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  +F  MK+    P+   YT LI   CR   V +A+ LL EM ER    D++T+N 
Sbjct: 274 IDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNS 332

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G CR G ++ A  +L  +   G+  ++ +Y   ++F C+   +E+A  L   +   G
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
              +    + L+   CK G  ++A      ++     P + ++  L+  +C    L  A 
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452

Query: 505 ELLDELV 511
            L D++V
Sbjct: 453 SLFDQMV 459



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 31/322 (9%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN LI   C  G L+ A  +  +M K  +  P + T++ LI  + K G F +A +
Sbjct: 430 PNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLK-PTVYTFNILIGRMLKQGDFDDAHK 488

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             ++M+S  +  P A TYN  I+ +C  GKV  A+ +M  MK  G  P+ F YT+L+  +
Sbjct: 489 CLQKMMSSGE-KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI---------------------------- 351
            K G    A +V   M +   +P    + +LI                            
Sbjct: 548 GKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVP 607

Query: 352 -NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            +   +    D  +EL +EM++ GC  D   +  ++ G+C+   +  AL +L+++  +GI
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             ++  +  V++  C+  +  +A  ++  M+C G  P       L+  L + G  E    
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNS 727

Query: 471 ALFGLVEMGFKPESDSWALLVE 492
               L   G+  +  +W +L++
Sbjct: 728 VFKKLRGCGYNDDEIAWKILID 749



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/392 (20%), Positives = 173/392 (44%), Gaps = 34/392 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F++++E+ G + N   Y+ ++D   +  K +    +  +M  + C  +   F  L+
Sbjct: 381 ARRLFDSLTEE-GVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALI 439

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               +    +  L +F ++  +   KP++   +  +  +++    D A   L+       
Sbjct: 440 HGLCSAGNLKEALSLFDQMVKMGL-KPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP    +N  I+ +C  G ++ A +++ +MK+  +  P+  TY++LI    K G    A
Sbjct: 499 -KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVP-PDDFTYTSLIKAYGKLGLTYSA 556

Query: 258 IELFEEMVSKDQILPDALTYNVLI------------------DGFCRGGKVDRAK--KIM 297
            ++ + M   D   P   T+  LI                  +     G V  +   K+M
Sbjct: 557 FDVLKSMFDAD-CEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMM 615

Query: 298 EF---------MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           EF         M+ +GC P+   Y  L++G CK   L  A ++ D+M+   + P  + + 
Sbjct: 616 EFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFN 675

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            +I+C C+  +  EA  ++++M   G    +     ++ GL  EG+ E    + +KL   
Sbjct: 676 AVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGC 735

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           G   ++ +++I+++   ++G +E+  +L   M
Sbjct: 736 GYNDDEIAWKILIDGMLKQGLVEEFSQLFEEM 767



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 2/165 (1%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
             E+ +EM+K   + P+   Y  LI G+CK      A++L ++M  K+ I P  + +N +
Sbjct: 620 VIELFEEMEKHGCT-PDSKCYEKLISGICKVENLGIALKLLDQM-QKEGISPSEMVFNAV 677

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I   C+  K   A  I+E M  +G +P + +  TL+ G  +EG+ +    VF +++    
Sbjct: 678 ISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGY 737

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             D I +  LI+   + G V+E  +L +EM++ GC     T++I+
Sbjct: 738 NDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 162/296 (54%), Gaps = 2/296 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +++PN  ++N LI  +C +G LE A     EM    +S   + TY+  +  L   GR  E
Sbjct: 214 KVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSM-TVATYNLFVHTLFMEGRAAE 272

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L EEM  K  + PDA TYN+LI+G+C+ GK  +A K+ E M   G    V  YT+L+
Sbjct: 273 AHALVEEMGEKG-LAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLI 331

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +    +G +QE   +F++     ++PD   Y  LIN  C  G +D A E++ EM+++   
Sbjct: 332 HALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT 391

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D VT+N ++ GLC  G+++EA G++E++   GI  +  SY  +++    KG+++ A+++
Sbjct: 392 PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKV 451

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
              M+ +GF P   T N ++  LC  G   DA   +  +V  G  P+  ++  L+E
Sbjct: 452 RDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIE 507



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 8/318 (2%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           LRL  +T  FNI+++H C  G    A E+L+     QM  PN +TY+T+I G C  GR +
Sbjct: 110 LRLPLSTTTFNIMLRHLCTAGKPVRALELLR-----QMPSPNAVTYNTVIAGFCARGRVQ 164

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTT 314
             IE+  EM  +  I PD  TY  +I G+C+ GKV+ A K+ + M   G   PN   Y  
Sbjct: 165 AGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNA 224

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+ G+C +G L+ A     EM +  +      Y   ++     GR  EA  L++EM E+G
Sbjct: 225 LIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKG 284

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D  T+NI++ G C+EGK ++A+ M E +   GI     +Y  +++    KG +++  
Sbjct: 285 LAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETD 344

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVEL 493
            L    + RG  P     N L+   C  G   D A  + G +E     P+  ++  L+  
Sbjct: 345 RLFNDAVRRGIRPDLFMYNALINSHCTGG-DMDRAFEIMGEMEKKRITPDDVTYNTLMRG 403

Query: 494 ICRGRKLLFAFELLDELV 511
           +C   +L  A  L++E+ 
Sbjct: 404 LCLLGRLDEARGLIEEMT 421



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 153/355 (43%), Gaps = 44/355 (12%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q  +EI   + E+ G   +  TYAT++    +  K E    V  +M  E       +  N
Sbjct: 164 QAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYN 223

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKY 191
            +     C      + + ++   + R    +       NL + +     +   A   ++ 
Sbjct: 224 ALIG-GYCDQGNLEVALRYRGEMVDR---GVSMTVATYNLFVHTLFMEGRAAEAHALVEE 279

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESA---FEVL--KEMKKSQMSY----------- 235
             +   L P+   +NILI  +CK G  + A   FEV+  K ++ + ++Y           
Sbjct: 280 MGEK-GLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKG 338

Query: 236 ------------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
                             P+L  Y+ LI+  C  G    A E+  EM  K +I PD +TY
Sbjct: 339 MVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM-EKKRITPDDVTY 397

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N L+ G C  G++D A+ ++E M   G  P++ +Y TL++G+  +G +++A +V DEM  
Sbjct: 398 NTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMG 457

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
               P  + Y  +I   C  G+  +A +L+KEM   G   D  T+  ++ GL  E
Sbjct: 458 KGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 33/216 (15%)

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL----------------------- 367
           +F ++    L   T  +  ++   C AG+   ALELL                       
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGR 162

Query: 368 --------KEMKERGCKA-DIVTFNIILGGLCREGKIEEALGMLEKLWYDG-IYLNKASY 417
                   +EM+ERG  A D  T+  ++ G C+ GK+E+A  + +++  +G +  N   Y
Sbjct: 163 VQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMY 222

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++   C +G LE A+     M+ RG     AT N  +  L   G A +A   +  + E
Sbjct: 223 NALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGE 282

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G  P++ ++ +L+   C+  K   A ++ + +V K
Sbjct: 283 KGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGK 318


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 204/419 (48%), Gaps = 41/419 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL+I + + E KGF+ +  TY +++  + +  +FE    +L+QM    C           
Sbjct: 282 ALDIVDFMIE-KGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECS---------- 330

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     P+    +T ++ L + N+++ A +  +       
Sbjct: 331 --------------------------PNTVTYNTLISALCKENEIEAATDLARILVSK-G 363

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+ C FN LI+  C     + A E+ +EMK ++   P+  TYS LID LC   R +EA
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK-NKGCKPDEFTYSILIDSLCYERRLKEA 422

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L +EM S      +A+ YN LIDG C+  +++ A++I + M+  G + +   Y TL++
Sbjct: 423 LMLLKEMESSG-CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID 481

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK  +++EA ++ D+M    LKPD   Y +L+  FCR G +++A ++++ M   GC+ 
Sbjct: 482 GLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP 541

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI T+  ++GGLCR G+++ A  +L  +   GI L   +Y  V+     +   ++ + L 
Sbjct: 542 DIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLF 601

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL-FGLVEMGFKPESDSWALLVELIC 495
           R M+ +   P   T   +   LC  G     AI     ++E G  PE  S+  L E +C
Sbjct: 602 REMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLC 660



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 225/449 (50%), Gaps = 41/449 (9%)

Query: 100 TILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPI 159
           T+L +L +   F+++  +L+Q+       +   F  L++ F+N    E +L++       
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGF 119

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
              KP     +  LN L+E N++ L +    K  N+ + L  +T  FN+LIK  CK   L
Sbjct: 120 ---KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVST--FNVLIKALCKAHQL 174

Query: 219 ESAFEVLKEM-------------------------------KKSQMSYPNLIT---YSTL 244
             A  +L+EM                               KK  + Y  L+T      L
Sbjct: 175 RPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVL 234

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           ++G CK GR  EA+    E VS++   PD +T+N L++GFCR G V+ A  I++FM   G
Sbjct: 235 VNGFCKEGRVEEALRFVLE-VSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
            +P+V+ Y +L++G CK G+ ++A E+  +M      P+T+ Y TLI+  C+   ++ A 
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +L + +  +G   D+ TFN ++ GLC     + A+ M E++   G   ++ +Y I+++  
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C +  L++A+ LL+ M   G   +    N L+  LCK+   EDA      +  +G    S
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIK 513
            ++  L++ +C+ +++  A +L+D+++++
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIME 502



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 222/445 (49%), Gaps = 10/445 (2%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           +E+ ++    +G   + +T+  ++  L +  +      +L +M     K  E  F  LM+
Sbjct: 142 VEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQ 201

Query: 139 HFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
            F         L+M  ++  +       S+K +   +N   +  +V+ A  F+   ++  
Sbjct: 202 GFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVL---VNGFCKEGRVEEALRFVLEVSEE- 257

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
              P+   FN L+   C+ G +  A +++  M +     P++ TY++LI G+CK G F +
Sbjct: 258 GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD-PDVYTYNSLISGMCKLGEFEK 316

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           AIE+ ++M+ + +  P+ +TYN LI   C+  +++ A  +   + + G  P+V  + TL+
Sbjct: 317 AIEILQQMILR-ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 375

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            G C       A E+F+EMKN   KPD   Y+ LI+  C   R+ EAL LLKEM+  GC 
Sbjct: 376 QGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCA 435

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            + V +N ++ GLC+  +IE+A  + +++   G+  +  +Y  +++  C+   +E+A +L
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQL 495

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           +  M+  G  P   T N LL   C+ G  E A   +  +   G +P+  ++  L+  +CR
Sbjct: 496 MDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCR 555

Query: 497 GRKLLFAFELLDELVIKESGTIQVP 521
             ++  A +LL  + +K  G +  P
Sbjct: 556 AGRVDVASKLLRSVQMK--GIVLTP 578



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 160/322 (49%), Gaps = 8/322 (2%)

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           S  H  L PN      L+    +  + +S   +LK++K S  S PN  T++TLI      
Sbjct: 49  STTHHPLPPN----ETLLLQLTQSSSFDSITTLLKQLKSSG-SIPNATTFATLIQSFTN- 102

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
             F E   L + + ++    PD   YN+ ++      K+   + +   M N G   +V  
Sbjct: 103 --FHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVST 160

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           +  L+   CK  +L+ A  + +EM N  LKPD I +TTL+  F   G ++ AL++ K+M 
Sbjct: 161 FNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQML 220

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
             GC    V+  +++ G C+EG++EEAL  + ++  +G   ++ ++  ++N  C+ G + 
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A++++  M+ +GF P   T N L+  +CK G  E A   L  ++     P + ++  L+
Sbjct: 281 DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340

Query: 492 ELICRGRKLLFAFELLDELVIK 513
             +C+  ++  A +L   LV K
Sbjct: 341 SALCKENEIEAATDLARILVSK 362



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 140/284 (49%), Gaps = 3/284 (1%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S  ++  L    TL+  L ++  F     L +++ S   I P+A T+  LI  F    ++
Sbjct: 48  SSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSI-PNATTFATLIQSFTNFHEI 106

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           +   KI+E     G  P+   Y   +N   ++ KL+  + +  +M N  +  D   +  L
Sbjct: 107 ENLLKILE--NELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVL 164

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I   C+A ++  A+ +L+EM   G K D +TF  ++ G   EG +  AL M +++   G 
Sbjct: 165 IKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGC 224

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
            L   S ++++N  C++G +E+A+  +  +   GF P   T N L+   C+ G   DA  
Sbjct: 225 LLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALD 284

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            +  ++E GF P+  ++  L+  +C+  +   A E+L +++++E
Sbjct: 285 IVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 8/304 (2%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           K    A+E+F  + + KG   +  TY+ ++D L   ++ +    +L++M    C  +  +
Sbjct: 382 KNQDIAMEMFEEM-KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 440

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           +  L+         E   E+F ++  +   + S+   +T ++ L ++ +V+ A   +   
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV-TYNTLIDGLCKNKRVEEASQLMDQM 499

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                LKP+   +N L+ + C+ G +E A ++++ M  S    P++ TY TLI GLC+ G
Sbjct: 500 IME-GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA-SNGCEPDIFTYGTLIGGLCRAG 557

Query: 253 RFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           R   A +L   +  K  +L P A  YN +I       +     ++   M      P+   
Sbjct: 558 RVDVASKLLRSVQMKGIVLTPHA--YNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALT 615

Query: 312 YTTLMNGFCKEG-KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +  +  G C  G  +QEA +   EM    + P+   +  L    C     D  +EL+  +
Sbjct: 616 HKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMV 675

Query: 371 KERG 374
            E+ 
Sbjct: 676 MEKA 679


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 184/355 (51%), Gaps = 5/355 (1%)

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           P    +P+  + +T +  L    +   A   L+ S Q   ++P+   +  LI+  C    
Sbjct: 86  PRLASRPNAISYTTLMRALCADRRAAQAVGLLR-SMQDCGVRPDVVTYGTLIRGLCDAAD 144

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +++A E+L EM +S +  PN++ YS L+ G CK GR+    ++FEEM S   I PD + Y
Sbjct: 145 VDTAVELLNEMCESGIE-PNVVVYSCLLHGYCKTGRWESVGKVFEEM-SGRGIEPDVVMY 202

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
             LID  CR GKV +A ++M+ M   G  PNV  Y  L+N  CKEG ++EA ++   M  
Sbjct: 203 TALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSE 262

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEM--KERGCKADIVTFNIILGGLCREGKI 395
             ++PD + Y TLI        +DEA+ LL+EM   E   + D++TFN ++ GLC+ G +
Sbjct: 263 KGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWM 322

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            +AL +   +  +G   N  ++ +++    +  +++KA+EL+  M   G  P   T + L
Sbjct: 323 RQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSIL 382

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +   CK    E A   L  +   G +PE   +  L++ +C    +  A +L +E+
Sbjct: 383 INGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM 437



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 179/339 (52%), Gaps = 24/339 (7%)

Query: 193 NQHLRLKP---------------NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ--MSY 235
           N+HLRL P               +   +N ++   C++G L++A  +L+ M       S 
Sbjct: 32  NRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASR 91

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAK 294
           PN I+Y+TL+  LC + R  +A+ L   M  +D  + PD +TY  LI G C    VD A 
Sbjct: 92  PNAISYTTLMRALCADRRAAQAVGLLRSM--QDCGVRPDVVTYGTLIRGLCDAADVDTAV 149

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +++  M  +G  PNV  Y+ L++G+CK G+ +   +VF+EM    ++PD + YT LI+  
Sbjct: 150 ELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSL 209

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           CR G+V +A  ++  M ERG + ++VT+N+++  +C+EG + EAL + + +   G+  + 
Sbjct: 210 CRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRG---FLPHYATSNELLVRLCKAGMAEDAAIA 471
            +Y  ++       E+++A+ LL  M+ +G     P   T N ++  LCK G    A   
Sbjct: 270 VTYNTLITGLSSVLEMDEAMALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              + E G +    ++ LL+  + R  K+  A EL+DE+
Sbjct: 329 RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM 367



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 201/404 (49%), Gaps = 5/404 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY T++  L      +    +L +M     + +  ++  L+  +      E V
Sbjct: 124 GVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESV 183

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            ++F ++     E P +   +  ++ L    +V  A   +    +   L+PN   +N+LI
Sbjct: 184 GKVFEEMSGRGIE-PDVVMYTALIDSLCRHGKVKKAARVMDMMTER-GLEPNVVTYNVLI 241

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD- 268
              CK G++  A ++ K M +  +  P+++TY+TLI GL       EA+ L EEM+  + 
Sbjct: 242 NSMCKEGSVREALDLRKNMSEKGVQ-PDVVTYNTLITGLSSVLEMDEAMALLEEMMQGET 300

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
           ++ PD +T+N +I G C+ G + +A ++   M  NGC  N+  +  L+ G  +  K+++A
Sbjct: 301 RVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKA 360

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            E+ DEM +  L+PD+  Y+ LIN FC+  +V+ A   L EM+ +G + + V +  +L  
Sbjct: 361 MELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKA 420

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +C +G + +A  +  ++  +   L+ A+Y  +++ + + GE + A E L+ M+  G +P 
Sbjct: 421 MCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPD 479

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             T +  +    K+G    A   L  +   GF P+   +  L++
Sbjct: 480 AVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQ 523



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 181/370 (48%), Gaps = 16/370 (4%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           ++F  +S  +G   +   Y  ++D L R+ K +    V+  MT        G+  N++ +
Sbjct: 185 KVFEEMS-GRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT------ERGLEPNVVTY 237

Query: 140 --FSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
               N    E  +     +     EK   P +   +T +  L    ++D A   L+   Q
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297

Query: 195 -HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
              R++P+   FN +I   CK G +  A +V + M        NL+ ++ LI GL +  +
Sbjct: 298 GETRVRPDLMTFNSVIHGLCKIGWMRQALQV-RAMMAENGCRCNLVAFNLLIGGLLRVHK 356

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            ++A+EL +EM S   + PD+ TY++LI+GFC+  +V+RA+  +  M++ G  P   +Y 
Sbjct: 357 VKKAMELMDEMASSG-LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYI 415

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+   C +G + +A+++F+EM     K D   Y+T+I+   ++G    A E LK+M + 
Sbjct: 416 PLLKAMCDQGMMGQARDLFNEMDRNC-KLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDE 474

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   D VT++I +    + G +  A  +L+++   G   + A +  ++     KG+ EK 
Sbjct: 475 GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKI 534

Query: 434 IELLRLMLCR 443
           +EL R M  +
Sbjct: 535 LELTREMTAK 544



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 130/246 (52%), Gaps = 3/246 (1%)

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQEAK 329
           DA++YN ++   CR G +D A  ++  M +       PN  +YTTLM   C + +  +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +   M++  ++PD + Y TLI   C A  VD A+ELL EM E G + ++V ++ +L G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+ G+ E    + E++   GI  +   Y  +++  C+ G+++KA  ++ +M  RG  P+ 
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T N L+  +CK G   +A      + E G +P+  ++  L+  +    ++  A  LL+E
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 510 LVIKES 515
           ++  E+
Sbjct: 295 MMQGET 300



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 14/317 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLN 135
           AL++   +SE KG   +  TY T++  L+   + +   A+L +M     +    +  F +
Sbjct: 253 ALDLRKNMSE-KGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNS 311

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           ++          + L+    +  +  E   + +L A +  +  L+  ++V  A   +   
Sbjct: 312 VIHGLCKIGWMRQALQ----VRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM 367

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                L+P++  ++ILI   CK   +E A   L EM+   M  P  + Y  L+  +C  G
Sbjct: 368 ASS-GLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGME-PEPVHYIPLLKAMCDQG 425

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              +A +LF EM    ++  DA  Y+ +I G  + G+   A++ ++ M + G  P+   Y
Sbjct: 426 MMGQARDLFNEMDRNCKL--DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTY 483

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           +  +N F K G L  A+ V  +M      PD   + +LI  +   G  ++ LEL +EM  
Sbjct: 484 SIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTA 543

Query: 373 RGCKADIVTFNIILGGL 389
           +    D    + I+  L
Sbjct: 544 KDVALDPKIISTIVTSL 560


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 247/556 (44%), Gaps = 139/556 (25%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL  F +++    F H   T+  ++ KLA   + ++V  +L+QM  +     E +F++++
Sbjct: 59  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118

Query: 138 KHFSNCSLHERVLEMFHKI----------------------------HPITRE------K 163
             +    L ER +EMF++I                            + + R+      +
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHL-------------------------- 196
           P++   +  L  L ++N+VD A+  L + SN+                            
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238

Query: 197 --RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
             R +P   ++N LI   CK    + AFE+++EM +  +S PN+I+YSTLI+ LC +G+ 
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS-PNVISYSTLINVLCNSGQI 297

Query: 255 R-----------------------------------EAIELFEEMVSKDQILPDALTYNV 279
                                               +A++L+ +M+    + P+ + YN 
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L+ GFC  G + +A  +   M+  GC+PN+  Y +L+NGF K G L  A  ++++M    
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417

Query: 340 LKPDTIGYTTLINCFCR-----------------------------------AGRVDEAL 364
             P+ + YT ++   CR                                   AGR+D A 
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477

Query: 365 ELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           ++ ++M+++  C  +IVT+N +L GL +  +IEEA G+  +++  G+  + ++Y  +L+ 
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG---F 480
           SC  G    A++L+  M+  G  P   T N +++  CK G AE AA  +  LV  G   +
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA-QMLDLVSCGRRKW 596

Query: 481 KPESDSWALLVELICR 496
           +P+  S+  ++  +CR
Sbjct: 597 RPDVISYTNVIWGLCR 612



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 211/472 (44%), Gaps = 69/472 (14%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ GF  N  TY  +L  L +  K +    +L +M+ + C      +  ++       L 
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232

Query: 147 ERVLEMFHKIHPIT-----------------------RE------KPSLKAISTCLNLLI 177
           +   E+  +  P+                        RE       P++ + ST +N+L 
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292

Query: 178 ESNQVDLAQNFLK-----------YS---------------------NQHLR---LKPNT 202
            S Q++LA +FL            Y+                     NQ +R   L+PN 
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV 352

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N L++  C  G +  A  V   M++   S PN+ TY +LI+G  K G    A+ ++ 
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS-PNIRTYGSLINGFAKRGSLDGAVYIWN 411

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           +M++     P+ + Y  +++  CR  K   A+ ++E M    C P+V  +   + G C  
Sbjct: 412 KMLTSG-CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470

Query: 323 GKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           G+L  A++VF +M +     P+ + Y  L++   +A R++EA  L +E+  RG +    T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N +L G C  G    AL ++ K+  DG   ++ +  +++   C++G+ E+A ++L L+ 
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590

Query: 442 C--RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           C  R + P   +   ++  LC++   ED  I L  ++  G  P   +W++L+
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 178/392 (45%), Gaps = 48/392 (12%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E + + A E+   + E KG + N  +Y+T+++ L    + E   + L QM    C  H  
Sbjct: 259 EHDYKGAFELMREMVE-KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC--HPN 315

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNF 188
           I+  L      C L     +     + + R    +P++ A +T +        +  A + 
Sbjct: 316 IY-TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
             +  + +   PN   +  LI    KRG+L+ A  +  +M  S    PN++ Y+ +++ L
Sbjct: 375 FSHM-EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC-PNVVVYTNMVEAL 432

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNGCNP 307
           C++ +F+EA  L E M SK+   P   T+N  I G C  G++D A+K+   M + + C P
Sbjct: 433 CRHSKFKEAESLIEIM-SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491

Query: 308 NVFNYTTLMNGFCKEGKLQEA----KEVF-------DEMKNFLL---------------- 340
           N+  Y  L++G  K  +++EA    +E+F           N LL                
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551

Query: 341 --------KPDTIGYTTLINCFCRAGRVDEALELLKEMK--ERGCKADIVTFNIILGGLC 390
                    PD I    +I  +C+ G+ + A ++L  +    R  + D++++  ++ GLC
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           R    E+ + +LE++   GI  + A++ +++N
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 147/317 (46%), Gaps = 25/317 (7%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V   +T V       F SHG  +           A+ +F+ + E+ G + N  TY ++
Sbjct: 350 PNVVAYNTLVQG-----FCSHGNIVK----------AVSVFSHM-EEIGCSPNIRTYGSL 393

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           ++  A+    +    +  +M    C  +  ++ N+++       H +  E    I  +++
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR---HSKFKEAESLIEIMSK 450

Query: 162 EK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           E   PS+   +  +  L ++ ++D A+   +   Q  R  PN   +N L+    K   +E
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIE 510

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A+ + +E+    + + +  TY+TL+ G C  G    A++L  +M+  D   PD +T N+
Sbjct: 511 EAYGLTREIFMRGVEWSS-STYNTLLHGSCNAGLPGIALQLVGKMMV-DGKSPDEITMNM 568

Query: 280 LIDGFCRGGKVDRAKKIMEFMK--NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           +I  +C+ GK +RA ++++ +        P+V +YT ++ G C+    ++   + + M +
Sbjct: 569 IILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMIS 628

Query: 338 FLLKPDTIGYTTLINCF 354
             + P    ++ LINCF
Sbjct: 629 AGIVPSIATWSVLINCF 645



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 125/257 (48%), Gaps = 9/257 (3%)

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTT 314
           A+  F+ + + +      LT+ V+I      G+VD  + +++ MK  G  C+ ++F   +
Sbjct: 59  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLF--IS 116

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++ + + G  + A E+F  +K F   P    Y  +++      R+     + ++MK  G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + ++ T+N++L  LC+  K++ A  +L ++   G   +  SY  V++  C+ G +++  
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           E     L   F P  +  N L+  LCK    + A   +  +VE G  P   S++ L+ ++
Sbjct: 237 E-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291

Query: 495 CRGRKLLFAFELLDELV 511
           C   ++  AF  L +++
Sbjct: 292 CNSGQIELAFSFLTQML 308


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 222/459 (48%), Gaps = 41/459 (8%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           I +++  K P+ A  +F   + Q+ F H   TY   L+ L +         +   M Y+ 
Sbjct: 8   IHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKE 67

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
           C  +   +  +++   + +  +  LE+   +       P+   ++  ++ L ++ +VD A
Sbjct: 68  CLPNIYTYGIVLRGLCDDAKTDAALELLQDMES-KMLTPTTFIVNMLVSCLCKNGKVDAA 126

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
               K  +    L  +   +N+L    CK   ++ A  V  EM+++ +  P+L+TY+ L+
Sbjct: 127 YELYKRLSDECSL--DRISYNMLTYGLCKADQIDRALAVFGEMEENAVV-PSLLTYNGLL 183

Query: 246 DGLCKNGRFREAIELFEEMVSKDQ---ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            G C+ GR  +A+ L EEM+   +   ++PD  +YN +I GFC+  ++  A+ ++  M  
Sbjct: 184 YGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIK 243

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +GC+PNV  + TL++G C  GKL EA  +F+ M     +P  + YT LI    RA R+D+
Sbjct: 244 SGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDK 303

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A +   +M  RG + ++ T+  ++GGLC   K+E+AL +L+++   G   N  +Y  V+ 
Sbjct: 304 ANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIG 363

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+ G++E+A +L               ++ +  R  K                   KP
Sbjct: 364 ALCKGGQIERATKLF--------------NDAMGSRTAKC------------------KP 391

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           +S +++ ++  +CR  K L A+E    +V  ES  +  P
Sbjct: 392 DSYAYSTIIYWLCRQSKFLEAYEYFLRMV--ESKLVAKP 428



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 38/227 (16%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N +I   CK   L +A  VL+ M KS  S PN++T++TL+DGLC  G+  EA  
Sbjct: 213 PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCS-PNVVTFNTLLDGLCLTGKLDEANA 271

Query: 260 LFEEMVSKD----------------------------------QILPDALTYNVLIDGFC 285
           +FE MV ++                                   + P+  TY  LI G C
Sbjct: 272 MFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLC 331

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKP 342
              KV+ A +I++ M + G  PNV  YT ++   CK G+++ A ++F++    +    KP
Sbjct: 332 DANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKP 391

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           D+  Y+T+I   CR  +  EA E    M E    A    +  +  GL
Sbjct: 392 DSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 172/330 (52%), Gaps = 7/330 (2%)

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ-----MSYPNLITY 241
           N L    + + ++P    F ILI H CK   ++ A EV ++MK  +        P+ I Y
Sbjct: 172 NLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMY 231

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           +TLIDGLCK GR  EA+ L  +M S DQ  P   T+N LI+G+CR G+++ A K+   M+
Sbjct: 232 NTLIDGLCKVGRQEEALCLMGKMRS-DQCAPTTATFNCLINGYCRSGEIEVAHKLFNEME 290

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           N    PNV    TL++G CK  ++  A E F  M+   LK + + YT  IN FC    ++
Sbjct: 291 NAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMN 350

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           +A+E L EM + GC  D V +  ++ GL + G++++A  ++ KL   G  L++  Y +++
Sbjct: 351 KAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLI 410

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV-EMGF 480
           +  C+K +L++A E L  M   G  P   T N L+    K G  + A   +  +  E G 
Sbjct: 411 SEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGL 470

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDEL 510
            P   ++  L+   C    +  A ++  E+
Sbjct: 471 SPTVFTYGALIHAYCLNNNIDEAIKIFKEM 500



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 200/426 (46%), Gaps = 25/426 (5%)

Query: 101 ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPIT 160
           +L  L + ++F  ++ ++R+M     +     F  L+ H       +  LE+F K+    
Sbjct: 158 LLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEK 217

Query: 161 REKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHLRL-----------KPNTCIFNIL 208
            E     A  T + N LI+           K   Q   L            P T  FN L
Sbjct: 218 EETKVFVAPDTIMYNTLIDG--------LCKVGRQEEALCLMGKMRSDQCAPTTATFNCL 269

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I  +C+ G +E A ++  EM+ +Q+  PN+IT +TL+DG+CK+ R   A+E F  M  K 
Sbjct: 270 INGYCRSGEIEVAHKLFNEMENAQIE-PNVITLNTLVDGMCKHNRISTAVEFFRVMQQKG 328

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +  + +TY V I+ FC    +++A + ++ M  +GC P+   Y TL+ G  + G+L +A
Sbjct: 329 -LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDA 387

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             V  ++K      D + Y  LI+ FC+  ++D A E L EM+  G K D VT+N ++  
Sbjct: 388 SSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISY 447

Query: 389 LCREGKIEEALGMLEKLWYD-GIYLNKASYRIVLNFSCQKGELEKAIELLRLM--LCRGF 445
             + G  + A   ++K+  + G+     +Y  +++  C    +++AI++ + M  +    
Sbjct: 448 FSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKV 507

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+    N L+  LCK      A   L  +   G  P + ++  + + +     L  AF+
Sbjct: 508 PPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFK 567

Query: 506 LLDELV 511
           L+D +V
Sbjct: 568 LMDRMV 573



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 156/297 (52%), Gaps = 6/297 (2%)

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-----ILPDALTYN 278
           ++++MK   +  P +IT+  LI+ LCK  R  +A+E+FE+M  + +     + PD + YN
Sbjct: 174 LMRKMKDMNIQ-PTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYN 232

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            LIDG C+ G+ + A  +M  M+++ C P    +  L+NG+C+ G+++ A ++F+EM+N 
Sbjct: 233 TLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENA 292

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            ++P+ I   TL++  C+  R+  A+E  + M+++G K + VT+ + +   C    + +A
Sbjct: 293 QIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKA 352

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           +  L+++  DG + +   Y  ++    Q G L+ A  ++  +   GF       N L+  
Sbjct: 353 MEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISE 412

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
            CK    + A   L  +   G KP+S ++  L+    +      A + + ++  +E 
Sbjct: 413 FCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG 469



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 185/394 (46%), Gaps = 12/394 (3%)

Query: 78  ALEIFNTVSEQKG-----FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           ALE+F  +  +K         +   Y T++D L +  + E    ++ +M  + C      
Sbjct: 206 ALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTAT 265

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F  L+  +      E   ++F+++     E P++  ++T ++ + + N++  A  F +  
Sbjct: 266 FNCLINGYCRSGEIEVAHKLFNEMENAQIE-PNVITLNTLVDGMCKHNRISTAVEFFRVM 324

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            Q   LK N   + + I   C    +  A E L EM K    +P+ + Y TLI GL + G
Sbjct: 325 QQK-GLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDG-CFPDAVVYYTLICGLAQAG 382

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           R  +A  +  ++      L D + YNVLI  FC+  K+DRA++ +  M+  G  P+   Y
Sbjct: 383 RLDDASSVVSKLKEAGFCL-DRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTY 441

Query: 313 TTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
            TL++ F K G  + A +   +M +   L P    Y  LI+ +C    +DEA+++ KEM 
Sbjct: 442 NTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMN 501

Query: 372 ERGCKA--DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
               K   + V +NI++  LC++ ++  AL +L+ + + G+  N  +Y  +      K  
Sbjct: 502 NVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNW 561

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           L+KA +L+  M+ +   P Y T   L   L   G
Sbjct: 562 LDKAFKLMDRMVEQACNPDYITMEILTEWLSAVG 595



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 150/326 (46%), Gaps = 10/326 (3%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E + A ++FN + E      N  T  T++D + ++ +        R M  +  K +   +
Sbjct: 278 EIEVAHKLFNEM-ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTY 336

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKY 191
              +  F N +   + +E   ++   +++   P      T +  L ++ ++D A + +  
Sbjct: 337 TVFINAFCNVNNMNKAMEFLDEM---SKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSK 393

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +        C +N+LI   CK+  L+ A E L EM+ + +  P+ +TY+TLI    K 
Sbjct: 394 LKEAGFCLDRVC-YNVLISEFCKKNKLDRAQEWLNEMELAGVK-PDSVTYNTLISYFSKI 451

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN--NGCNPNV 309
           G F+ A +  ++M  ++ + P   TY  LI  +C    +D A KI + M N  +   PN 
Sbjct: 452 GNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNT 511

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  L++  CK+ ++  A  + D+MK   + P+T  Y ++         +D+A +L+  
Sbjct: 512 VIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDR 571

Query: 370 MKERGCKADIVTFNIILGGLCREGKI 395
           M E+ C  D +T  I+   L   G+I
Sbjct: 572 MVEQACNPDYITMEILTEWLSAVGEI 597



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 4/254 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E  + +S+   F  +   Y T++  LA+  + +   +V+ ++           +  L+
Sbjct: 352 AMEFLDEMSKDGCF-PDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLI 410

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F   +  +R  E  +++  +   KP     +T ++   +     LA  F+K   +   
Sbjct: 411 SEFCKKNKLDRAQEWLNEME-LAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG 469

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-SQMSYPNLITYSTLIDGLCKNGRFRE 256
           L P    +  LI  +C    ++ A ++ KEM   +    PN + Y+ LID LCK  +   
Sbjct: 470 LSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNF 529

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L ++M  +  ++P+  TYN +         +D+A K+M+ M    CNP+      L 
Sbjct: 530 ALSLLDDMKFRG-VMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILT 588

Query: 317 NGFCKEGKLQEAKE 330
                 G++ + K+
Sbjct: 589 EWLSAVGEITKLKK 602



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/385 (21%), Positives = 139/385 (36%), Gaps = 121/385 (31%)

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           T +S+  +L+ + +  M    L  +STL D   KN   R                     
Sbjct: 5   TAQSSVHLLRRLGRIGMVDEALAAFSTL-DSHAKNTNVR--------------------- 42

Query: 277 YNVLIDGFCRGGKVDRAKKIM--------EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            N +I+   + G+VD A  ++        EF  N+     VFN    ++G   EG+++E 
Sbjct: 43  -NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGL--EGRVKE- 98

Query: 329 KEVFDEMKNFLLK-------PDTIGYTTLINCFCRAGRVDEALE---------------- 365
               DE+   + K       PDTI  T LI+  CR+G  + A                  
Sbjct: 99  ----DEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAP 154

Query: 366 -------------------LLKEMKERGCKADIVTFNIILG------------------- 387
                              L+++MK+   +  ++TF I++                    
Sbjct: 155 CNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMK 214

Query: 388 ----------------------GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
                                 GLC+ G+ EEAL ++ K+  D      A++  ++N  C
Sbjct: 215 GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYC 274

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + GE+E A +L   M      P+  T N L+  +CK      A      + + G K  + 
Sbjct: 275 RSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNV 334

Query: 486 SWALLVELICRGRKLLFAFELLDEL 510
           ++ + +   C    +  A E LDE+
Sbjct: 335 TYTVFINAFCNVNNMNKAMEFLDEM 359


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 215/466 (46%), Gaps = 27/466 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           +I        AL+ F  +S++  + H+   + ++L++L + K     D V R +  + C+
Sbjct: 77  IINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHV-RILMIKACR 135

Query: 128 FHE-----------------GIFLNLMKHFSNCSLHERVLEMFHKIHPITRE------KP 164
             +                 G+F   +  F+   L     +M      +  +      KP
Sbjct: 136 NEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKP 195

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +T +N+L +  +V  A        Q   L P+   +  LI  HC+   L+ AFEV
Sbjct: 196 SLLTFNTMINILCKKGKVQEAVLVFNKIFQ-FDLCPDAFTYTSLILGHCRNRKLDKAFEV 254

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M K   + PN +TYSTLI+GLC  GR  EA+++ EEM  K  I P   TY V I   
Sbjct: 255 FDRMVKDGCN-PNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG-IEPTVYTYTVPISSL 312

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C  G+VD A  ++  M   GC+P+V  YT +++G  + GK++ A  ++ +M    L P+T
Sbjct: 313 CDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNT 372

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + Y  LIN  C  GR   AL++   M+  G  A+  T+N I+ GL     IE+A+ +  K
Sbjct: 373 VTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNK 432

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +  DG      +Y  ++  + ++G L  A   L +M      P   T  EL+   CK G 
Sbjct: 433 MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGK 492

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + A    + +++ G  P   ++  +++  C+  K+  A  L + +
Sbjct: 493 LDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERM 538



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 218/443 (49%), Gaps = 19/443 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F+ +  + G N N+ TY+T+++ L    +      +L +MT +       ++   +
Sbjct: 251 AFEVFDRMV-KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEK--GIEPTVYTYTV 307

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
              S C +  RV +  + +  + ++   PS++  +  ++ L  + +++LA   +   ++ 
Sbjct: 308 PISSLCDIG-RVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA---IGMYHKM 363

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           L+  L PNT  +N LI   C  G    A ++   M+    +  N  TY+ +I GL     
Sbjct: 364 LKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME-GHGTLANAQTYNQIIKGLFGMDD 422

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+ +F +M+ KD   P  +TYN LI    + G ++ A + +  MK + C P+   Y 
Sbjct: 423 IEKAMVVFNKML-KDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYC 481

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++GFCK GKL  A   F EM    + P+   YT +I+ +C+ G++D AL L + M+E 
Sbjct: 482 ELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEEN 541

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC A I T+N I+ GL +  +  EA     K+   G+  N  +Y  ++N  C+      A
Sbjct: 542 GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLA 601

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            ++   M  +  LP+  T   L+  LC+ G  + A      L E G +P  D+++ LV  
Sbjct: 602 FKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSG 657

Query: 494 ICRGRKLLFAFELLDELVIKESG 516
           +CR  +   A +L++ +  KE G
Sbjct: 658 LCREGRSNEASQLVENM--KEKG 678



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 196/411 (47%), Gaps = 20/411 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   N  TY  ++++L    +F     +   M       +   +  ++K        E
Sbjct: 365 KEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIE 424

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL------KPN 201
           + + +F+K+    ++ PS   ++   N LI  N   L + +L  + + L +      +P+
Sbjct: 425 KAMVVFNKM---LKDGPSPTVVT--YNTLIVEN---LKRGYLNNATRFLYMMKESNCEPD 476

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +  LI   CK G L+SA     EM K  +S PN  TY+ +IDG CK G+   A+ LF
Sbjct: 477 ERTYCELISGFCKGGKLDSATSFFYEMLKCGIS-PNQWTYTAMIDGYCKEGKIDVALSLF 535

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           E M  ++       TYN +I G  +G +   A+K    M   G  PN   YT+L+NG CK
Sbjct: 536 ERM-EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
                 A ++F EM+     P+   YT+LI   C+ G+VD A    + + E GC+  I T
Sbjct: 595 NTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDT 650

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ ++ GLCREG+  EA  ++E +   G+  +   Y  +L   C+  +++ A+E+  LM 
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMA 710

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
            +GF PH      L+  LC    AE+A      L++  +  +   W +LV+
Sbjct: 711 VKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVD 761



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 168/316 (53%), Gaps = 8/316 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +N LI  + KRG L +A   L  MK+S    P+  TY  LI G CK G+   A  
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCE-PDERTYCELISGFCKGGKLDSATS 498

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F EM+ K  I P+  TY  +IDG+C+ GK+D A  + E M+ NGC+ ++  Y  +++G 
Sbjct: 499 FFYEML-KCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGL 557

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K  +  EA++   +M    L+P+TI YT+LIN  C+    + A ++  EM+++ C  + 
Sbjct: 558 SKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNA 617

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+  ++ GLC+EGK++ A    E+L  +G      +Y  +++  C++G   +A +L+  
Sbjct: 618 HTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVEN 673

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGR 498
           M  +G  P       LLV  CK+ +  D A+ +F L+ + GF+P    + +L+  +C   
Sbjct: 674 MKEKGLSPSMEIYCSLLVAHCKS-LKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVS 732

Query: 499 KLLFAFELLDELVIKE 514
           +   A  +   L+ K+
Sbjct: 733 RAEEALNIFQSLLKKQ 748



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 199/443 (44%), Gaps = 52/443 (11%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++ A I+ +  E     AL+IF+ + E  G   N  TY  I+  L      E    V  
Sbjct: 373 VTYNALINELCTEGRFGIALKIFDWM-EGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFN 431

Query: 120 QMTYE-----TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
           +M  +        ++  I  NL + + N +   R L M  + +    E+   + IS    
Sbjct: 432 KMLKDGPSPTVVTYNTLIVENLKRGYLNNA--TRFLYMMKESNCEPDERTYCELISG--- 486

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
              +  ++D A +F  Y      + PN   +  +I  +CK G ++ A  + + M+++  S
Sbjct: 487 -FCKGGKLDSATSFF-YEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCS 544

Query: 235 ----------------------------------YPNLITYSTLIDGLCKNGRFREAIEL 260
                                              PN ITY++LI+GLCKN     A ++
Sbjct: 545 ASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKI 604

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F EM  K   LP+A TY  LI G C+ GKVD A+++ E    NGC P +  Y+TL++G C
Sbjct: 605 FHEM-EKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLC 659

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +EG+  EA ++ + MK   L P    Y +L+   C++ +VD ALE+   M  +G +  + 
Sbjct: 660 REGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLF 719

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            + +++  LC   + EEAL + + L       +   + ++++   Q+G+ +  ++ L LM
Sbjct: 720 IYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLM 779

Query: 441 LCRGFLPHYATSNELLVRLCKAG 463
             R   P   T   L   L K G
Sbjct: 780 ESRNCTPSLHTYIILARELSKVG 802



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 2/321 (0%)

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           K  N H+        F  + K H  +  +     +L  + K ++  P       +I    
Sbjct: 76  KIINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACR 135

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTY--NVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
                +   +    + S D  L     Y  N L+    +   V  A+ +   + ++G  P
Sbjct: 136 NEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKP 195

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           ++  + T++N  CK+GK+QEA  VF+++  F L PD   YT+LI   CR  ++D+A E+ 
Sbjct: 196 SLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF 255

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M + GC  + VT++ ++ GLC EG+I EA+ MLE++   GI     +Y + ++  C  
Sbjct: 256 DRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDI 315

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G ++ AI L+R M  +G  P   T   ++  L +AG  E A      +++ G  P + ++
Sbjct: 316 GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTY 375

Query: 488 ALLVELICRGRKLLFAFELLD 508
             L+  +C   +   A ++ D
Sbjct: 376 NALINELCTEGRFGIALKIFD 396



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 32/260 (12%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           S++  +  ++ L + N+   A+ F     +   L+PNT  +  LI   CK      AF++
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKMTEQ-GLQPNTITYTSLINGLCKNTATNLAFKI 604

Query: 225 LKEMKK----------SQMSY--------------------PNLITYSTLIDGLCKNGRF 254
             EM+K          + + Y                    P + TYSTL+ GLC+ GR 
Sbjct: 605 FHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRS 664

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA +L E M  K  + P    Y  L+   C+  KVD A +I   M   G  P++F Y  
Sbjct: 665 NEASQLVENMKEKG-LSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKV 723

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+   C   + +EA  +F  +       D I +T L++   + G  D  ++ L  M+ R 
Sbjct: 724 LICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRN 783

Query: 375 CKADIVTFNIILGGLCREGK 394
           C   + T+ I+   L + GK
Sbjct: 784 CTPSLHTYIILARELSKVGK 803



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/135 (19%), Positives = 66/135 (48%)

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + +FN +L  L +   +  A  +  +++  G+  +  ++  ++N  C+KG++++A+ +  
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +      P   T   L++  C+    + A      +V+ G  P S +++ L+  +C   
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 499 KLLFAFELLDELVIK 513
           ++  A ++L+E+  K
Sbjct: 282 RIGEAMDMLEEMTEK 296


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 215/441 (48%), Gaps = 30/441 (6%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
            P  AL  F  +  Q GF H   +Y  +L  L R     A + V   M       HE  F
Sbjct: 82  HPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARF 141

Query: 134 -LNLMKH--FS-NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
            LNL+ H  FS + + + R+  +  +   I             LN L +    D      
Sbjct: 142 VLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDE-----------LNCLFKDMLND------ 184

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
                   ++PN   FN ++  HCK G +  A      + K      +  TY++LI G C
Sbjct: 185 -------GVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSF-TYTSLILGYC 236

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K     +A ++FE M  ++  L + ++Y  LI GFC  GK+D A ++   MK +GC P+V
Sbjct: 237 KIHELGDAYKVFEIM-PQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDV 295

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             YT L+  FC+ GK  EA + F+EM    ++P+   YT LI+ FC+ G++DE +E+L  
Sbjct: 296 PTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLST 355

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M E+G  + +V FN ++ G C+ G +E+A+ +L+ +  + +  N  +Y  ++   C+K  
Sbjct: 356 MLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKS 415

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +++A+ LL  M      P+  T N L+  LCKA + + A      +++ GF P+  ++  
Sbjct: 416 MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCA 475

Query: 490 LVELICRGRKLLFAFELLDEL 510
            ++ +C+  K+  A ++ + L
Sbjct: 476 FIDCLCKMGKVEQAHQVFESL 496



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 213/431 (49%), Gaps = 10/431 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  ++ TY +++    +  +      V   M  E C  +E  + NL+  F      +  
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEA 279

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNI 207
           LE+F ++    +E      + T   L+    +V      LK+  + +   ++PN   + +
Sbjct: 280 LELFFQM----KEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI + CK G ++   E+L  M +  +   +++ ++ LIDG CK G   +AI + + M   
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGL-VSSVVPFNALIDGYCKRGMMEDAICVLDSM-KL 393

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           +++ P++ TYN LI GFCR   +DRA  ++  M  N  +PN+  Y TL++G CK   +  
Sbjct: 394 NKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDS 453

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +   M      PD   +   I+C C+ G+V++A ++ + +KE+  +A+   +  ++ 
Sbjct: 454 AWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALID 513

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G C+  K  +A  + +++ ++G + N  ++ ++L+   ++G++E A+ L+ +M      P
Sbjct: 514 GYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKP 573

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T   L+  + +    + A + L  ++  G +P   ++   ++  CR  +LL A E++
Sbjct: 574 TVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMV 633

Query: 508 DELVIKESGTI 518
             + IKE G +
Sbjct: 634 --VKIKEEGIL 642



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 163/346 (47%), Gaps = 30/346 (8%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +L PN   +N LI   CK   ++SA+ +   M K     P+  T+   ID LCK G+  +
Sbjct: 430 KLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGF-VPDQRTFCAFIDCLCKMGKVEQ 488

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++FE +  K     +   Y  LIDG+C+  K   A  + + M   GC PN   +  L+
Sbjct: 489 AHQVFESLKEK-HAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLL 547

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G  KEGK+++A  + D M  F  KP    YT LI    R    D A   L +M   GC+
Sbjct: 548 DGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQ 607

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++VT+   +   CR+G++ EA  M+ K+  +GI L+   Y +++N     G+L+ A  +
Sbjct: 608 PNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGV 667

Query: 437 LRLMLCRGFLPHYATSNELLVRLC-----KAGMAEDA-------------AIALFGLVEM 478
           L  M   G  P   T + LL  L      K GM  D               IA F ++ M
Sbjct: 668 LIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM 727

Query: 479 GFK--------PESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
            F+        P  ++++ L++ +C+   L  AF L + +  KESG
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHM--KESG 771



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 181/440 (41%), Gaps = 48/440 (10%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF  +  T+   +D L +  K E    V   +  +  + +E ++  L+  +       
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKA---- 518

Query: 148 RVLEMFHKIHPITREK------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN 201
              E F   H + +        P+    +  L+ L +  +V+ A + +    +    KP 
Sbjct: 519 ---EKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGK-FDAKPT 574

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              + ILI+   +    + A   L +M  S    PN++TY+  I   C+ GR  EA    
Sbjct: 575 VHTYTILIEEILRESDFDRANMFLDQMISSGCQ-PNVVTYTAFIKAYCRQGRLLEA---- 629

Query: 262 EEMVSK---DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           EEMV K   + IL D+  Y+VL++ +   G++D A  ++  M + GC P+   Y+ L+  
Sbjct: 630 EEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKH 689

Query: 319 -----FCKEG---------------------KLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
                + KEG                       +    +F++M      P+   Y+ LI 
Sbjct: 690 LIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIK 749

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+   +  A  L   MKE G        N +L   C+ G  EEAL +L+ +       
Sbjct: 750 GLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLA 809

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  SY++++    ++G  EKA E+ R +L  G+         LL  L + G  ++ +   
Sbjct: 810 HLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLR 869

Query: 473 FGLVEMGFKPESDSWALLVE 492
             + + G +  SD+  +L +
Sbjct: 870 DIMEKTGCRLHSDTHTMLSQ 889



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 174/393 (44%), Gaps = 39/393 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F ++ E+     N   Y  ++D   + +KF     + ++M +E C F   I  N++
Sbjct: 489 AHQVFESLKEKHA-EANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGC-FPNSITFNVL 546

Query: 138 KHFSNCSLHERVLEMFHKIHPITR--EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                     +V +    +  + +   KP++   +  +  ++  +  D A  FL   +Q 
Sbjct: 547 --LDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFL---DQM 601

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +    +PN   +   IK +C++G L  A E++ ++K+  +   + I Y  L++     G+
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFI-YDVLVNAYGCIGQ 660

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLI-----DGFCRGG----------KVDRAK--KI 296
              A  +   M       P   TY++L+     + + + G           VD A   KI
Sbjct: 661 LDSAFGVLIRMFDTG-CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKI 719

Query: 297 MEF---------MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            +F         M   GC PNV  Y+ L+ G CK   L  A  +F+ MK   + P    +
Sbjct: 720 ADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIH 779

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            +L++  C+ G  +EAL LL  M E    A + ++ +++ GL  +G  E+A  +   L  
Sbjct: 780 NSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLS 839

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            G   ++  ++++L+   +KG +++  +L  +M
Sbjct: 840 CGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIM 872



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 111/229 (48%)

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A+ ++  + ++  + +V +Y  L     + G + E   +F +M N  ++P+ I + T++N
Sbjct: 139 ARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVN 198

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ G V  A      + + G   D  T+  ++ G C+  ++ +A  + E +  +G   
Sbjct: 199 AHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLR 258

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N+ SY  +++  C+ G++++A+EL   M   G  P   T   L+   C+ G   +A    
Sbjct: 259 NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFF 318

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
             +VE G +P   ++ +L++  C+  K+    E+L  ++ K   +  VP
Sbjct: 319 EEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVP 367


>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 247/498 (49%), Gaps = 35/498 (7%)

Query: 5   RFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGA 64
           RFS        + +T++ SLP           + K  PP++        R   + +S   
Sbjct: 11  RFSTAISAAIVANTTTTPSLP----------QSYKIQPPIKPWP----HRLNPKLLS--- 53

Query: 65  AISLIKCEKEPQCALEIFNTVS--EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM- 121
             SLI  + +P  +L+IF       +  F+HN  TY  I  KL++++ F  ++++L  + 
Sbjct: 54  --SLISRQHDPHFSLQIFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCFSEIESLLAGLR 111

Query: 122 -TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
            +   C   E I + +++ +       R L+ F +I      +PS+++I+  LN L+++ 
Sbjct: 112 SSPPHCCGEEPI-VTVIRGYGLAGKPVRALKTFLRIESFGI-RPSVRSINALLNSLVQNK 169

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           +  LA    K   +  R+ PN    NIL+K  CK   +E A +VL EM    +  PN+++
Sbjct: 170 RYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGL-VPNVVS 228

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+T++ G    G    A+++F E++ +    PD  +Y VL+DGFCR GK+  A ++M+ M
Sbjct: 229 YTTVLGGFVWRGDMDGAMKVFREVLDRGWS-PDVTSYTVLVDGFCRLGKLVDAIRVMDIM 287

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT---TLINCFCRA 357
           ++NG  PN   Y  ++  +CKE K  EA  + ++M   + K   +G      +++  C  
Sbjct: 288 EDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDM---IAKDLVVGSELCCKVVDLLCEE 344

Query: 358 GRVDEALELLKEMKERGCKAD-IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           G V++A E+ + +  + C  +  V  + ++  LC++GK+ EA  + ++    G   +  +
Sbjct: 345 GNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEF-GKGSVASLLT 403

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++   C+ GEL +A  L   M+ +G  P+  T N L+   CK G A++    L  ++
Sbjct: 404 YNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEML 463

Query: 477 EMGFKPESDSWALLVELI 494
           E    P   ++ +L++ I
Sbjct: 464 ENRCLPNKSTYTILIDGI 481



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 158/311 (50%), Gaps = 35/311 (11%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++ + + L++ L +N R+R A  +F+    + ++LP+ ++ N+L+   C+G +V+ A K
Sbjct: 153 PSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVK 212

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M   G  PNV +YTT++ GF   G +  A +VF E+ +    PD   YT L++ FC
Sbjct: 213 VLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFC 272

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R G++ +A+ ++  M++ G + + VT+ +++   C+E K  EA+ ++E +    + +   
Sbjct: 273 RLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSE 332

Query: 416 SYRIVLNFSCQKGELEKAIELLRLM-------------------LC-------------- 442
               V++  C++G +EKA E+ R++                   LC              
Sbjct: 333 LCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDE 392

Query: 443 --RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G +    T N L+  LC+ G   +AA     +VE G  P + ++ +L++  C+    
Sbjct: 393 FGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNA 452

Query: 501 LFAFELLDELV 511
                +L+E++
Sbjct: 453 KEGIRVLEEML 463



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 40/272 (14%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++ + +T L   +    +D A    +         P+   + +L+   C+ G L  A  
Sbjct: 224 PNVVSYTTVLGGFVWRGDMDGAMKVFREVLDR-GWSPDVTSYTVLVDGFCRLGKLVDAIR 282

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI------------- 270
           V+  M+ + +  PN +TY  +I   CK  +  EA+ L E+M++KD +             
Sbjct: 283 VMDIMEDNGVE-PNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLL 341

Query: 271 ----------------------LPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNP 307
                                 L  A+  + LI   C+ GKV  A+ +  EF K  G   
Sbjct: 342 CEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGK--GSVA 399

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           ++  Y TL+ G C+ G+L EA  ++D+M    + P+   Y  LI  FC+ G   E + +L
Sbjct: 400 SLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVL 459

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           +EM E  C  +  T+ I++ G+   G +++ +
Sbjct: 460 EEMLENRCLPNKSTYTILIDGILLLGGMKQEI 491



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 5/175 (2%)

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           C+ G +E A E+ + + +        +  STLI  LCK G+  EA  +F+E       + 
Sbjct: 342 CEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKGS--VA 399

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
             LTYN LI G C GG++  A ++ + M   G  PN F Y  L+ GFCK G  +E   V 
Sbjct: 400 SLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVL 459

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL-ELLKEMKERGCKADIVTFNIIL 386
           +EM      P+   YT LI+     G + + + +++      G  AD+  +NI +
Sbjct: 460 EEMLENRCLPNKSTYTILIDGILLLGGMKQEINKVVSLAMSTGVDADL--WNIFV 512



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 104/203 (51%), Gaps = 1/203 (0%)

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            T++ G+   GK   A + F  +++F ++P       L+N   +  R   A  + K   E
Sbjct: 124 VTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGE 183

Query: 373 R-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           R     ++V+ NI+L  LC+  ++E A+ +L+++   G+  N  SY  VL     +G+++
Sbjct: 184 RFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMD 243

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A+++ R +L RG+ P   +   L+   C+ G   DA   +  + + G +P   ++ +++
Sbjct: 244 GAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMI 303

Query: 492 ELICRGRKLLFAFELLDELVIKE 514
           +  C+ +K   A  L+++++ K+
Sbjct: 304 QAYCKEKKSGEAVNLIEDMIAKD 326


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 219/428 (51%), Gaps = 24/428 (5%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFSNCSLHERVL 150
           +++  +L  LA+ K +  V ++  QM     + + C  +  I LN +     C+++ R+ 
Sbjct: 70  SSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLN--ILLNCL-----CNVN-RLR 121

Query: 151 EMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNI 207
           E F     I R    P++   +T +  L   +++  A   FL+   Q L   P+   +  
Sbjct: 122 EGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM--QKLGCTPDVVTYGT 179

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSY-----PNLITYSTLIDGLCKNGRFREAIELFE 262
           LIK  C  G +  A ++ +EM      Y     PN+ITY+ ++DGLCK GR  EA +LFE
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM ++  I P  ++YN LI GFC  GK + +K++++ M + G  P++  +  L++  CKE
Sbjct: 240 EMKTQGMI-PSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKE 298

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK+ EAK++   M    + PD + Y +LI  FC  G ++ A EL   M  +GC+ D++++
Sbjct: 299 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 358

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N+++ G  +  K+EEA+ +  ++   G   N  +Y  +L      G+++ A +L  +M  
Sbjct: 359 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 418

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G   +  T    L  LCK     +A      L    FK E ++   L++ +C+  KL  
Sbjct: 419 HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLET 478

Query: 503 AFELLDEL 510
           A+EL ++L
Sbjct: 479 AWELFEKL 486



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 168/306 (54%), Gaps = 4/306 (1%)

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           S   +  KPN   +NI++   CK G  + A ++ +EMK   M  P++I+Y++LI G C  
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM-IPSIISYNSLIHGFCCA 263

Query: 252 GRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           G++ E+  L +EM+  DQ L PD +T+NVLID  C+ GKV  AKK++  M  +G  P++ 
Sbjct: 264 GKWEESKRLLDEML--DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLV 321

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y +L+ GFC  G L  A+E+F  M +   +PD I Y  LIN + +  +V+EA++L  EM
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
              G + +++T++ +L G+   GK+++A  +   +   GI  N  +Y I L+  C+   L
Sbjct: 382 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCL 441

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            +A++L   +    F       N L+  LCKAG  E A      L   G +P   ++ ++
Sbjct: 442 FEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM 501

Query: 491 VELICR 496
           +   CR
Sbjct: 502 IHGFCR 507



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 171/318 (53%), Gaps = 2/318 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN+LI   CK G +  A ++L  M +S +  P+L+TY++LI+G C  G    A
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI-VPDLVTYNSLIEGFCMVGDLNSA 339

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF  M SK    PD ++YNVLI+G+ +  KV+ A K+   M   G  PNV  Y +L+ 
Sbjct: 340 RELFVSMPSKG-CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLK 398

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G    GK+ +AK++F  MK   +  ++  Y   ++  C+   + EA++L  E+K    K 
Sbjct: 399 GIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKL 458

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I   N ++ GLC+ GK+E A  + EKL  +G   N  +Y I+++  C++G+++KA  L+
Sbjct: 459 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 518

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M   G  P   T N L+    ++   E+    L  + +    P++ + +++V+++ + 
Sbjct: 519 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 578

Query: 498 RKLLFAFELLDELVIKES 515
            K      LL    I++ 
Sbjct: 579 EKYQECLHLLPRFPIQKG 596



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 9/277 (3%)

Query: 249 CKNGRFREAIEL-FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           CK G       L F  ++ +    P   ++N L+ G  +     +   +   M+ +G + 
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +      L+N  C   +L+E    F  +      P+ + Y TLI   C   R+ EA  L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD------GIYLNKASYRIVL 421
             M++ GC  D+VT+  ++ GLC  G I  AL + +++  D          N  +Y I++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G  ++A +L   M  +G +P   + N L+   C AG  E++   L  +++ G +
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           P+  ++ +L++ +C+  K++ A +LL   V+ ESG +
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLG--VMIESGIV 317


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 207/424 (48%), Gaps = 4/424 (0%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N  T+   +  L R  K +    +L++M    C      +  L+    N    
Sbjct: 254 ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKL 313

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
               E+F K+   +  KP      T L+   +   +D  + F         L P+   F 
Sbjct: 314 NNAKELFLKMKA-SSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYL-PDVVTFT 371

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ILI   CK G ++ AF  L  MKK  ++ PNL TY+TLI GL +  R  EA+ELF  M S
Sbjct: 372 ILIDALCKVGKVDEAFGTLDVMKKQGVA-PNLHTYNTLICGLLRLNRLDEALELFNSMES 430

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              +   A TY + ID + + G+  +A K  E MK NG  PN+      +    ++G+L+
Sbjct: 431 LG-LETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLE 489

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EAKE F+ +K   L PD I Y  L+ C+ +AGRVD+A++LL EM+E GC  ++V  N ++
Sbjct: 490 EAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLI 549

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             L +  +++EA  M +++    +     +Y  +L    ++G +++A  L + M+     
Sbjct: 550 DTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCP 609

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+  + N LL  LCK G  + A   LF + EM   P+  ++  ++  + +  ++ +AF L
Sbjct: 610 PNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWL 669

Query: 507 LDEL 510
             ++
Sbjct: 670 FHQM 673



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 220/468 (47%), Gaps = 14/468 (2%)

Query: 48  DTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
           D  V  RK    +S      ++K   +P  A   FN+V+E     H   T   +L+ L  
Sbjct: 75  DVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRA 134

Query: 108 YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH-FSNCSLHER--VLEMFHKIHPITREKP 164
           +++ E +  V   M  +  K     +L + K  +    L E    LE   K+  +     
Sbjct: 135 HRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYS 194

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAF 222
            +  I    +LL++S      +  LK   + +   +KP+   ++ L+    KR  +E+  
Sbjct: 195 YIGLI----HLLLKSG---FCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVM 247

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L+EM+   +  PN+ T++  I  L + G+  EA  + + M       PD +TY VLID
Sbjct: 248 GLLQEMESLGLR-PNIYTFTICIRILGRAGKIDEAYGILKRM-DDAGCGPDVVTYTVLID 305

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C  GK++ AK++   MK +   P+   Y TL++ F   G L   KE + EM+     P
Sbjct: 306 ALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLP 365

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + +T LI+  C+ G+VDEA   L  MK++G   ++ T+N ++ GL R  +++EAL + 
Sbjct: 366 DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELF 425

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +   G+     +Y + +++  + GE  KAI+    M   G +P+    N  L  L + 
Sbjct: 426 NSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQ 485

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G  E+A     GL + G  P++ ++ +L+    +  ++  A +LL E+
Sbjct: 486 GRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEM 533



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 189/349 (54%), Gaps = 8/349 (2%)

Query: 146  HERVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
            H + ++ ++    +T+     PSL+A ++ ++ L+++   ++A     Y  ++    P+ 
Sbjct: 765  HGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLF-YKMKNAGCTPDV 823

Query: 203  CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
              +N+ +    K G ++  F++ +EM   +   PN IT++ +I GL K+    +AI+L+ 
Sbjct: 824  FTYNLFLDALGKSGKIKELFDLYEEML-FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYY 882

Query: 263  EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            +++S D   P   TY  LIDG  + G+++ AK+  E M + GC PN   Y  LMNGF K+
Sbjct: 883  DLMSGD-FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941

Query: 323  GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            G ++ A E+F  M    ++PD   Y+ +++C C  G+VD+AL   +E+K  G   D+V +
Sbjct: 942  GDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCY 1001

Query: 383  NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR-IVLNFSCQKGELEKAIELLRLML 441
            N+++ GL R  ++EEAL + +++   GI  +  +Y  ++LN     G +E+A ++   + 
Sbjct: 1002 NLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIA-GMVEEAGKMYEELQ 1060

Query: 442  CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             +G  P+  T N L+     +G  + A      ++  G +P + ++A L
Sbjct: 1061 LKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 166/310 (53%), Gaps = 3/310 (0%)

Query: 182  VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
            VD    FLK + +   + P+   +N LI    K    E A+ +  +MK +  + P++ TY
Sbjct: 769  VDAYNVFLKLT-KSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCT-PDVFTY 826

Query: 242  STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
            +  +D L K+G+ +E  +L+EEM+ +    P+ +T+N++I G  +   +D+A  +   + 
Sbjct: 827  NLFLDALGKSGKIKELFDLYEEMLFRG-CKPNTITHNIVIFGLVKSNSLDKAIDLYYDLM 885

Query: 302  NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
            +   +P  + Y  L++G  K G+L+EAK+ F+EM ++   P+   Y  L+N F + G V+
Sbjct: 886  SGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVE 945

Query: 362  EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
             A EL + M + G + D+ +++I++  LC  GK+++AL   E+L   G+  +   Y +++
Sbjct: 946  TACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMI 1005

Query: 422  NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
            N   +   +E+A+ L   M  RG  P   T N L++ L  AGM E+A      L   G +
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065

Query: 482  PESDSWALLV 491
            P   ++  L+
Sbjct: 1066 PNVFTYNALI 1075



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 200/468 (42%), Gaps = 39/468 (8%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            A ++F  + E K       TY T+L  L +  + +   A+ + M  + C  +   F  L+
Sbjct: 561  AWKMFQRMKEMK-LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLL 619

Query: 138  KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                     +  L+M  ++  +    P +   +T +  LI+ N+V+ A  F  +      
Sbjct: 620  DCLCKNGEVDLALKMLFRMTEMNC-FPDVLTYNTVIYGLIKENRVNYA--FWLFHQMKKV 676

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG---------- 247
            + P+      L+    K G +E AF V KE       + +   +  L+ G          
Sbjct: 677  IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQS 736

Query: 248  -------------------------LCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
                                     LCK+G+  +A  +F ++     I P    YN LID
Sbjct: 737  ILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLID 796

Query: 283  GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            G  +    + A  +   MKN GC P+VF Y   ++   K GK++E  ++++EM     KP
Sbjct: 797  GLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKP 856

Query: 343  DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
            +TI +  +I    ++  +D+A++L  ++          T+  ++ GL + G++EEA    
Sbjct: 857  NTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFF 916

Query: 403  EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            E++   G   N   Y I++N   ++G++E A EL R M+  G  P   + + ++  LC  
Sbjct: 917  EEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMV 976

Query: 463  GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  +DA      L   G  P+   + L++  + R +++  A  L DE+
Sbjct: 977  GKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 203/432 (46%), Gaps = 9/432 (2%)

Query: 80  EIFNT--VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E F T  V +++G   N  TY T++  L R  + +    +   M     +     ++  +
Sbjct: 385 EAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFI 444

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
            ++       + ++ F K+       P++ A +  L  L E  +++ A+ F     +   
Sbjct: 445 DYYGKSGESGKAIKTFEKMK-TNGIVPNIVACNASLYSLAEQGRLEEAKEFFN-GLKKCG 502

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +NIL++ + K G ++ A ++L EM+++    P ++  ++LID L K  R  EA
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCD-PEVVIINSLIDTLYKADRVDEA 561

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F+ M  + ++ P  +TYN L+ G  + G+V  A  + + M  + C PN  ++ TL++
Sbjct: 562 WKMFQRM-KEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLD 620

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK G++  A ++   M      PD + Y T+I    +  RV+ A  L  +MK +    
Sbjct: 621 CLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYP 679

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYD-GIYLNKASYRIVLNFSCQKGELEKAIEL 436
           D VT   +L G+ ++G+IE+A  + ++  +  G + + + +  ++     + E+ ++I  
Sbjct: 680 DYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILF 739

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELIC 495
              ++C       +    L+  LCK G A DA      L +     P  +++  L++ + 
Sbjct: 740 AESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLL 799

Query: 496 RGRKLLFAFELL 507
           + R    A+ L 
Sbjct: 800 KARLTEMAWGLF 811



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 204/471 (43%), Gaps = 43/471 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E FN + ++ G   +  TY  ++    +  + +    +L +M    C     I  +L+
Sbjct: 491 AKEFFNGL-KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLI 549

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    +   +MF ++  + +  P++   +T L  L +  +V  A    K       
Sbjct: 550 DTLYKADRVDEAWKMFQRMKEM-KLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIAD-D 607

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PNT  FN L+   CK G ++ A ++L  M +    +P+++TY+T+I GL K  R   A
Sbjct: 608 CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMN-CFPDVLTYNTVIYGLIKENRVNYA 666

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLM 316
             LF +M  K  I PD +T   L+ G  + G+++ A ++  EF+ + G + +   +  LM
Sbjct: 667 FWLFHQM--KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLM 724

Query: 317 NG-----------------------------------FCKEGKLQEAKEVFDEM-KNFLL 340
            G                                    CK GK  +A  VF ++ K+F +
Sbjct: 725 GGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCI 784

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P    Y +LI+   +A   + A  L  +MK  GC  D+ T+N+ L  L + GKI+E   
Sbjct: 785 TPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFD 844

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           + E++ + G   N  ++ IV+    +   L+KAI+L   ++   F P   T   L+  L 
Sbjct: 845 LYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL 904

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           K G  E+A      +++ G  P    + +L+    +   +  A EL   +V
Sbjct: 905 KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 9/265 (3%)

Query: 163  KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
            KP+    +  +  L++SN +D A + L Y        P    +  LI    K G LE A 
Sbjct: 855  KPNTITHNIVIFGLVKSNSLDKAID-LYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAK 913

Query: 223  EVLKEMKKSQMSY---PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            +  +EM    + Y   PN   Y+ L++G  K G    A ELF  MV K+ I PD  +Y++
Sbjct: 914  QFFEEM----LDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV-KEGIRPDLKSYSI 968

Query: 280  LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
            ++D  C  GKVD A    E +K +G +P++  Y  ++NG  +  +++EA  +FDEM+N  
Sbjct: 969  MVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG 1028

Query: 340  LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
            + PD   Y  LI     AG V+EA ++ +E++ +G + ++ T+N ++ G    G  + A 
Sbjct: 1029 ITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAY 1088

Query: 400  GMLEKLWYDGIYLNKASYRIVLNFS 424
             + +K+   G   N  ++  + N S
Sbjct: 1089 AVYKKMMVGGCRPNTGTFAQLPNQS 1113


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 214/436 (49%), Gaps = 40/436 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  +   YAT+++ L +     A   +LR M    C+    ++  L 
Sbjct: 163 ALHLFDKMIWE-GFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTL- 220

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                             IH + +++   +A +    ++ +                   
Sbjct: 221 ------------------IHSLCKDRQQTQAFNLFSEMITKG------------------ 244

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN    N L+   C  G  +    +L EM  S++  PN I+ +T++D LCK G   +A
Sbjct: 245 ISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKI-MPNAISLTTVVDALCKEGMVAQA 303

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ + M+ +  + PD +TY  LIDG C   ++D A K+ + M + GC PNVF+Y TL+N
Sbjct: 304 HDVVD-MMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLIN 362

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK  ++ +A  +F+EM    L P+T+ Y TLI+  C  GR+ +A+ L +EM   G   
Sbjct: 363 GYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIP 422

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT+ I+L  LC+   +++A+ +L+ +    +  +   Y IV++  C+ GELE A +L 
Sbjct: 423 DLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLF 482

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +  +G  P+  T N +   LCK G+ ++A      + E     +  ++  + +   R 
Sbjct: 483 SNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRN 542

Query: 498 RKLLFAFELLDELVIK 513
            +   A +LL+E++ +
Sbjct: 543 NETSRAIQLLEEMLAR 558



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 173/340 (50%), Gaps = 9/340 (2%)

Query: 173 LNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           LN+LI S    N+V+ A + L    + L  +P+T  F  LIK  C  G +  A  +  +M
Sbjct: 112 LNVLINSFCHLNRVNFAFSVLAKILK-LGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM 170

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
                  P+++ Y+TLI+GLCK G    AI L   M  K    PD + Y  LI   C+  
Sbjct: 171 IWEGFQ-PDVVIYATLINGLCKTGHTSAAIRLLRSM-EKGNCQPDVVVYGTLIHSLCKDR 228

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           +  +A  +   M   G +PN+    +L+   C  G+ +    + +EM +  + P+ I  T
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           T+++  C+ G V +A +++  M + G + D+VT+  ++ G C   +++EA+ + + + + 
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N  SY  ++N  C+   ++KA+ L   M  +  +P+  T N L+  LC  G  +D 
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQD- 407

Query: 469 AIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           AIALF  +V  G  P+  ++ +L++ +C+   L  A  LL
Sbjct: 408 AIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALL 447



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 160/306 (52%), Gaps = 3/306 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+  +++T ++ L +   V  A + +    Q   ++P+   +  LI  HC R  ++ A +
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQS-GVEPDVVTYTALIDGHCLRSEMDEAVK 340

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V  +M   +   PN+ +Y+TLI+G CK  R  +A+ LFEEM  + +++P+ +TYN LI G
Sbjct: 341 VF-DMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMC-RQKLIPNTVTYNTLIHG 398

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C  G++  A  +   M   G  P++  Y  L++  CK   L +A  +   ++   L PD
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              YT +I+  CRAG +++A +L   +  +G K ++ T+NI+  GLC+ G ++EA  +  
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFM 518

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++  +    +  +Y  +     +  E  +AI+LL  ML RGF    +T+  L+  L   G
Sbjct: 519 EMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578

Query: 464 MAEDAA 469
           + +  A
Sbjct: 579 LDQSEA 584



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 154/311 (49%), Gaps = 2/311 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N    N+LI   C    +  AF VL ++ K     P+  +++TLI GLC  G+  EA+ L
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQ-PDTASFTTLIKGLCLEGQIGEALHL 166

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F++M+  +   PD + Y  LI+G C+ G    A +++  M+   C P+V  Y TL++  C
Sbjct: 167 FDKMI-WEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLC 225

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+ +  +A  +F EM    + P+ +   +L+   C  G       LL EM +     + +
Sbjct: 226 KDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAI 285

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           +   ++  LC+EG + +A  +++ ++  G+  +  +Y  +++  C + E+++A+++  +M
Sbjct: 286 SLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMM 345

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           + +G  P+  + N L+   CK    + A      +      P + ++  L+  +C   +L
Sbjct: 346 VHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRL 405

Query: 501 LFAFELLDELV 511
             A  L  E+V
Sbjct: 406 QDAIALFREMV 416



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 143/278 (51%), Gaps = 1/278 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+++ ++ ++  + K  R+   + L  +M S   I  +  T NVLI+ FC   +V+ A  
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFG-IPHNVYTLNVLINSFCHLNRVNFAFS 130

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   GC P+  ++TTL+ G C EG++ EA  +FD+M     +PD + Y TLIN  C
Sbjct: 131 VLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLC 190

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G    A+ LL+ M++  C+ D+V +  ++  LC++ +  +A  +  ++   GI  N  
Sbjct: 191 KTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIV 250

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +   ++   C  GE +    LL  M+    +P+  +   ++  LCK GM   A   +  +
Sbjct: 251 TCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMM 310

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + G +P+  ++  L++  C   ++  A ++ D +V K
Sbjct: 311 FQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 37/247 (14%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H    PN   +N LI  +CK   ++ A  + +EM + ++  PN +TY+TLI GLC  GR 
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL-IPNTVTYNTLIHGLCHVGRL 405

Query: 255 REAIELFEEMVSKDQILPDALTYNVL---------------------------------- 280
           ++AI LF EMV+  QI PD +TY +L                                  
Sbjct: 406 QDAIALFREMVACGQI-PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 464

Query: 281 -IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
            IDG CR G+++ A+ +   + + G  PNV+ Y  + +G CK G L EA ++F EM    
Sbjct: 465 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
              D   Y T+   F R      A++LL+EM  RG   D+ T  +++G L  +G  +   
Sbjct: 525 CSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEA 584

Query: 400 GMLEKLW 406
             LE ++
Sbjct: 585 HKLEDMF 591



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 2/190 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F+ M +    P  + +  ++    +  R    L L ++M   G   ++ T N+
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   ++  A  +L K+   G   + AS+  ++   C +G++ +A+ L   M+  G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLFA 503
           F P       L+  LCK G    AAI L   +E G  +P+   +  L+  +C+ R+   A
Sbjct: 175 FQPDVVIYATLINGLCKTGHTS-AAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQA 233

Query: 504 FELLDELVIK 513
           F L  E++ K
Sbjct: 234 FNLFSEMITK 243


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 183/337 (54%), Gaps = 6/337 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP +   +T ++ L ++  V+ A +      ++  ++P+  ++  L+   C  G    A 
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFD-QMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L+ M K ++  P++IT++ LID   K G+F +A EL+ EM+ +  I P+  TY  LI+
Sbjct: 233 SLLRGMTKRKIK-PDVITFNALIDAFVKEGKFLDAEELYNEMI-RMSIAPNIFTYTSLIN 290

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GFC  G VD A+++   M+  GC P+V  YT+L+NGFCK  K+ +A ++F EM    L  
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +TI YTTLI  F + G+ + A E+   M  RG   +I T+N++L  LC  GK+++AL + 
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 403 EKLW---YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
           E +     DG+  N  +Y ++L+  C  G+LEKA+ +   M  R       T   ++  +
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           CKAG  ++A      L   G KP   ++  ++  + R
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 207/401 (51%), Gaps = 14/401 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL- 136
           AL++F  + E +    +   +  +L+ +A+ KKF+ V  +   +       H+    NL 
Sbjct: 56  ALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVS-HDLYTCNLL 113

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-- 194
           M  F   S          K+  +  E P +   ++ +N     N+++ A + +   NQ  
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFE-PDIVTFTSLINGFCLGNRMEEAMSMV---NQMV 169

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            + +KP+  ++  +I   CK G +  A  +  +M+   +  P+++ Y++L++GLC +GR+
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR-PDVVMYTSLVNGLCNSGRW 228

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           R+A  L   M +K +I PD +T+N LID F + GK   A+++   M      PN+F YT+
Sbjct: 229 RDADSLLRGM-TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NGFC EG + EA+++F  M+     PD + YT+LIN FC+  +VD+A+++  EM ++G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              + +T+  ++ G  + GK   A  +   +   G+  N  +Y ++L+  C  G+++KA+
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407

Query: 435 ELLRLMLCR---GFLPHYATSNELLVRLCKAGMAEDAAIAL 472
            +   M  R   G  P+  T N LL  LC  G  E A +  
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 196/393 (49%), Gaps = 7/393 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  +  T+ ++++      + E   +++ QM     K    ++  ++            
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L +F ++      +P +   ++ +N L  S +   A + L+   +  ++KP+   FN LI
Sbjct: 197 LSLFDQMENYGI-RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALI 254

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
               K G    A E+  EM +  ++ PN+ TY++LI+G C  G   EA ++F  M +K  
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIA-PNIFTYTSLINGFCMEGCVDEARQMFYLMETKG- 312

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             PD + Y  LI+GFC+  KVD A KI   M   G   N   YTTL+ GF + GK   A+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER---GCKADIVTFNIIL 386
           EVF  M +  + P+   Y  L++C C  G+V +AL + ++M++R   G   +I T+N++L
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC  GK+E+AL + E +    + +   +Y I++   C+ G+++ A+ L   +  +G  
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           P+  T   ++  L + G+  +A +    + E G
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 187/393 (47%), Gaps = 41/393 (10%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   +  LN++ +  + D+  N   +  Q + +  +    N+L+   C+     
Sbjct: 66  SRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL-QIMGVSHDLYTCNLLMNCFCQSSQPY 124

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A   L +M K     P+++T+++LI+G C   R  EA+ +  +MV    I PD + Y  
Sbjct: 125 LASSFLGKMMKLGFE-PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG-IKPDVVMYTT 182

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC------------------- 320
           +ID  C+ G V+ A  + + M+N G  P+V  YT+L+NG C                   
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242

Query: 321 ----------------KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
                           KEGK  +A+E+++EM    + P+   YT+LIN FC  G VDEA 
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           ++   M+ +GC  D+V +  ++ G C+  K+++A+ +  ++   G+  N  +Y  ++   
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV--EM-GFK 481
            Q G+   A E+   M+ RG  P+  T N LL  LC  G  + A +    +   EM G  
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           P   ++ +L+  +C   KL  A  + +++  +E
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 169/336 (50%), Gaps = 8/336 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ + E  G   +   Y ++++ L    ++   D++LR MT    K     F  L+
Sbjct: 196 ALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F          E+++++  ++   P++   ++ +N       VD A+    Y  +   
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIA-PNIFTYTSLINGFCMEGCVDEARQMF-YLMETKG 312

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +  LI   CK   ++ A ++  EM +  ++  N ITY+TLI G  + G+   A
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT-GNTITYTTLIQGFGQVGKPNVA 371

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN---NGCNPNVFNYTT 314
            E+F  MVS+  + P+  TYNVL+   C  GKV +A  I E M+    +G  PN++ Y  
Sbjct: 372 QEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G C  GKL++A  VF++M+   +    I YT +I   C+AG+V  A+ L   +  +G
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            K ++VT+  ++ GL REG   EA  +  K+  DG+
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 35/236 (14%)

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI------------------- 351
           NY  ++       +  EA ++F  M      P  I +T L+                   
Sbjct: 39  NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98

Query: 352 ----------------NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                           NCFC++ +   A   L +M + G + DIVTF  ++ G C   ++
Sbjct: 99  QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           EEA+ M+ ++   GI  +   Y  +++  C+ G +  A+ L   M   G  P       L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC +G   DA   L G+ +   KP+  ++  L++   +  K L A EL +E++
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 166/299 (55%), Gaps = 2/299 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP    +N ++K  CK    + A EV + M +  ++ P++ +++ LI G C+ G  +EA
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVA-PDVRSFNILIGGFCRVGEVKEA 281

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++ ++EM  +  + PD ++++ LI  F R G++D A   +  MK  G  P+   YT ++ 
Sbjct: 282 VKFYKEMQHR-YVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIG 340

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC+ G + EA  V DEM  F   PD + Y TL+N  C+  R+ +A +LL EM+ERG   
Sbjct: 341 GFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP 400

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ TF  ++ G CR+G  E AL + + L    +  +  +Y  +++  C+KG+L KA EL 
Sbjct: 401 DLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELW 460

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             M  R  LP++ T + L+   C+ G  EDA   L  +V+ G  P   ++  +++  CR
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 227/472 (48%), Gaps = 24/472 (5%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P V T +  +DAR R+  +   AAI+L+                   +G      TY ++
Sbjct: 190 PDVVTHNVLIDARFRAGDVD--AAIALVDS--------------MANRGLKPGIVTYNSV 233

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSLHERVLEMFHKIHPI 159
           L  L ++++F+    V R M  + C     +  F  L+  F      +  ++ F+K    
Sbjct: 234 LKGLCKHRRFDKAKEVFRTM--DQCSVAPDVRSFNILIGGFCRVGEVKEAVK-FYKEMQH 290

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
               P + + S  + L     ++D A  +L+   + L L P+  I+ ++I   C+ G++ 
Sbjct: 291 RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR-EMKGLGLVPDGVIYTMVIGGFCRAGSMS 349

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  V  EM       P+++TY+TL++GLCK  R  +A +L  EM  +  + PD  T+  
Sbjct: 350 EALRVRDEMVGFG-CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG-VTPDLCTFTT 407

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI G+CR G  + A ++ + +      P+V  Y +L++G C++G L +A E++D+M    
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P+ I Y+ LI+  C  G+V++A   L EM ++G   +I T+N I+ G CR G +++  
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQ 527

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
             L+K+  D ++ +  ++  +++   ++  +  A  +  +M      P   T N ++   
Sbjct: 528 QFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGF 587

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + G  +DA     G+ + G +P+  ++  L+           AF+L DE++
Sbjct: 588 SEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMI 639



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 168/314 (53%), Gaps = 2/314 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N    NI++  +CK    + A  V+ EM+K +  +P+++T++ LID   + G    AI L
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEK-RCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            + M ++  + P  +TYN ++ G C+  + D+AK++   M      P+V ++  L+ GFC
Sbjct: 215 VDSMANRG-LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFC 273

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           + G+++EA + + EM++  + PD + ++ LI  F R G +D A   L+EMK  G   D V
Sbjct: 274 RVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGV 333

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            + +++GG CR G + EAL + +++   G   +  +Y  +LN  C++  L  A +LL  M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM 393

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG  P   T   L+   C+ G  E+A      L+    +P+  ++  L++ +CR   L
Sbjct: 394 EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDL 453

Query: 501 LFAFELLDELVIKE 514
             A EL D++  +E
Sbjct: 454 AKANELWDDMHARE 467



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 1/281 (0%)

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           S  S  N  T + ++   CK   F  A  +  EM  K  + PD +T+NVLID   R G V
Sbjct: 150 SSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEM-EKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D A  +++ M N G  P +  Y +++ G CK  +  +AKEVF  M    + PD   +  L
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNIL 268

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I  FCR G V EA++  KEM+ R    D+V+F+ ++G   R G+++ A   L ++   G+
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL 328

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +   Y +V+   C+ G + +A+ +   M+  G LP   T N LL  LCK     DA  
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L  + E G  P+  ++  L+   CR      A +L D L+
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 4/306 (1%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           ++L++   +RG   S  E++  +  S  + P    +  LI    ++ + REA E F  ++
Sbjct: 58  SLLLRMSRRRGA--SRREIVSSLLASSPT-PQPQVFDLLIRTYTQSRKPREAFEAFRLLL 114

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
                +P A   N L+    R G    A++    + ++    N +    +++ +CK  + 
Sbjct: 115 DHRVPVP-ASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEF 173

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A  V  EM+   + PD + +  LI+   RAG VD A+ L+  M  RG K  IVT+N +
Sbjct: 174 DGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSV 233

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC+  + ++A  +   +    +  +  S+ I++   C+ GE+++A++  + M  R  
Sbjct: 234 LKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYV 293

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   + + L+    + G  + A   L  +  +G  P+   + +++   CR   +  A  
Sbjct: 294 TPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353

Query: 506 LLDELV 511
           + DE+V
Sbjct: 354 VRDEMV 359


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 222/465 (47%), Gaps = 46/465 (9%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T +++L+     K+     A++ QM     K     F  L+       LH + 
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF---LHNKA 204

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    +  + +   +P L    T +N L +   +DLA N L    +  R+K N  IFN 
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN-KMEAARIKANVVIFNT 263

Query: 208 LIKHHCKRGTLESAFEVLKEM-----KKSQMSY--------------------------- 235
           +I   CK   +E A ++  EM     + + ++Y                           
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323

Query: 236 --PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
             PN++T++ LID   K G+  EA +L EEM+ +  I PD +TYN+LI+GFC   ++D A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEA 382

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           K++ +FM +  C PN+  Y TL+NGFCK  ++++  E+F EM    L  +T+ YTT+I  
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           F +AG  D A  + K+M       DI+T++I+L GLC  GK++ AL + + L    + LN
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
              Y  ++   C+ G++ +A +L   +  +   P   T N ++  LC   + ++A     
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFR 559

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
            + E G  P S ++  L+    R      + EL+ E+  + SG +
Sbjct: 560 KMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM--RSSGFV 602



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 159/294 (54%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           ++ A ++  +M KS+  +P+++ ++ L+  + K  +F   I L E+M +   I  D  TY
Sbjct: 64  VDDAVDLFGDMVKSR-PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG-ISHDLYTY 121

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           ++ I+ FCR  ++  A  ++  M   G  P++   ++L+NG+C   ++ +A  + D+M  
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              KPDT  +TTLI+      +  EA+ L+ +M +RGC+ D+VT+  ++ GLC+ G I+ 
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +L K+    I  N   +  +++  C+   +E A++L   M  +G  P+  T N L+ 
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P   ++  L++   +  KL+ A +L +E++
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 200/419 (47%), Gaps = 20/419 (4%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           KA   V   D  V    +   +++G  ++ +    +   AL + N + E      N   +
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIF 261

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI-----FLNLMKHFSNCSLHERVLE-M 152
            TI+D L +Y+  E    +  +M  ET      +      +N + ++   S   R+L  M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEM--ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
             K     +  P++   +  ++   +  ++  A+   +   Q   + P+T  +N+LI   
Sbjct: 320 LEK-----KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGF 373

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           C    L+ A ++ K M  S+   PN+ TY+TLI+G CK  R  + +ELF EM S+  ++ 
Sbjct: 374 CMHNRLDEAKQMFKFMV-SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVG 431

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           + +TY  +I GF + G  D A+ + + M +N    ++  Y+ L++G C  GKL  A  +F
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
             ++   ++ +   Y T+I   C+AG+V EA +L   +     K D+VT+N ++ GLC +
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSK 548

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             ++EA  +  K+  DG   N  +Y  ++  + +  +   + EL++ M   GF+   +T
Sbjct: 549 RLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 2/315 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FN L+    K    E    + ++M+   +S+ +L TYS  I+  C+  +   A+ 
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYSIFINCFCRRSQLSLALA 139

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  +M+ K    PD +T + L++G+C   ++  A  +++ M   G  P+ F +TTL++G 
Sbjct: 140 VLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
               K  EA  + D+M     +PD + Y T++N  C+ G +D AL LL +M+    KA++
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V FN I+  LC+   +E A+ +  ++   GI  N  +Y  ++N  C  G    A  LL  
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML +   P+  T N L+    K G   +A      +++    P++ ++ LL+   C   +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378

Query: 500 LLFAFELLDELVIKE 514
           L  A ++   +V K+
Sbjct: 379 LDEAKQMFKFMVSKD 393



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 188/385 (48%), Gaps = 17/385 (4%)

Query: 53  ARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE 112
           AR ++  +     I  +   +  + A+++F T  E KG   N  TY ++++ L  Y ++ 
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLF-TEMETKGIRPNVVTYNSLINCLCNYGRWS 310

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
               +L  M  +    +   F  L+  F      E  L    K+H    ++ S+   +  
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAF----FKEGKLVEAEKLHEEMIQR-SIDPDTIT 365

Query: 173 LNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            NLLI      N++D A+   K+      L PN   +N LI   CK   +E   E+ +EM
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREM 424

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
            +  +   N +TY+T+I G  + G    A  +F++MVS +++  D +TY++L+ G C  G
Sbjct: 425 SQRGL-VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCSYG 482

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K+D A  I ++++ +    N+F Y T++ G CK GK+ EA ++F  +    +KPD + Y 
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYN 539

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           T+I+  C    + EA +L ++MKE G   +  T+N ++    R+     +  +++++   
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599

Query: 409 GIYLNKASYRIVLNFSCQKGELEKA 433
           G   + ++  +V N     G L+K+
Sbjct: 600 GFVGDASTISLVTNM-LHDGRLDKS 623



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 2/226 (0%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           KVD A  +   M  +   P++  +  L++   K  K +    + ++M+   +  D   Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
             INCFCR  ++  AL +L +M + G + DIVT + +L G C   +I +A+ +++++   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   +  ++  +++      +  +A+ L+  M+ RG  P   T   ++  LCK G   D 
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI-DL 241

Query: 469 AIALFGLVEMG-FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A+ L   +E    K     +  +++ +C+ R +  A +L  E+  K
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 167/287 (58%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 148/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLR-PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M +NG  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++  M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 160/319 (50%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAXILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ +LML +   P   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 196/388 (50%), Gaps = 40/388 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  +Y  +L  L   K+++ V+ ++ +M    C  +   F  L+ +     L E+V
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQV 267

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E   ++ P     P L+  +T                                    +I
Sbjct: 268 HEALSQM-PEHGCTPDLRMYAT------------------------------------II 290

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G  E A ++L  M    +  PN++ Y+T++ GLC   R+ EA +L  EM  +D 
Sbjct: 291 DGICKDGHHEVANDILSRMPSYGLK-PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            L D +T+N+L+D FC+ G VDR  +++E M  +GC P+V  YTT++NGFCKEG + EA 
Sbjct: 350 PLDD-VTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 408

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +   M     KP+TI YT ++   CRA R  +A EL+  M ++GC  + VTFN ++  +
Sbjct: 409 MLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM 468

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C++G +E+A+ +L+++  +G   +  SY  V++   + G+ E+A+ELL +M+ +G  P+ 
Sbjct: 469 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT 528

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVE 477
              + +   L + G   D  I +F  ++
Sbjct: 529 IIYSSMASALSREGRT-DKIIQMFDSIQ 555



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 171/322 (53%), Gaps = 5/322 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FN LI + C+ G  E   E L +M +   + P+L  Y+T+IDG+CK+G    A +
Sbjct: 246 PNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT-PDLRMYATIIDGICKDGHHEVAND 304

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M S   + P+ + YN ++ G C   + + A+ ++  M    C  +   +  L++ F
Sbjct: 305 ILSRMPSYG-LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 363

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G +    E+ ++M      PD I YTT+IN FC+ G VDEA+ LLK M   GCK + 
Sbjct: 364 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 423

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++ I+L GLCR  +  +A  ++  +   G   N  ++  ++NF C+KG +E+AIELL+ 
Sbjct: 424 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQ 483

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
           ML  G  P   + + ++  L KAG  E+A   L  ++  G  P +  ++ +   + R GR
Sbjct: 484 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 543

Query: 499 --KLLFAFELLDELVIKESGTI 518
             K++  F+ + +  ++    +
Sbjct: 544 TDKIIQMFDSIQDATVRSDAAL 565



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 193/379 (50%), Gaps = 4/379 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N AT+ T++  L R   FE V   L QM    C     ++  ++        HE  
Sbjct: 243 GCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 302

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            ++  ++ P    KP++   +T L  L  + + + A++ L    Q      +   FNIL+
Sbjct: 303 NDILSRM-PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE-DCPLDDVTFNILV 360

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C+ G ++   E+L++M +     P++ITY+T+I+G CK G   EA+ L + M S   
Sbjct: 361 DFFCQNGLVDRVIELLEQMLE-HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM-SACG 418

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             P+ ++Y +++ G CR  +   A++++  M   GC PN   + TL+N  CK+G +++A 
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+  +M      PD I Y+T+I+   +AG+ +EALELL  M  +G   + + ++ +   L
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            REG+ ++ + M + +    +  + A Y  V++  C++ E ++AI+    M+  G +P+ 
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 598

Query: 450 ATSNELLVRLCKAGMAEDA 468
           +T   L+  L   G+  +A
Sbjct: 599 STYTILIRGLASEGLVREA 617



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 168/315 (53%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N ++K  C     +   E++ EM +     PN+ T++TLI  LC+NG F +  
Sbjct: 210 EPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCP-PNVATFNTLIAYLCRNGLFEQVH 268

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E   +M  +    PD   Y  +IDG C+ G  + A  I+  M + G  PNV  Y T++ G
Sbjct: 269 EALSQM-PEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKG 327

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C   + +EA+++  EM       D + +  L++ FC+ G VD  +ELL++M E GC  D
Sbjct: 328 LCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           ++T+  ++ G C+EG ++EA+ +L+ +   G   N  SY IVL   C+      A EL+ 
Sbjct: 388 VITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS 447

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+ +G LP+  T N L+  +CK G+ E A   L  ++  G  P+  S++ +++ + +  
Sbjct: 448 HMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 507

Query: 499 KLLFAFELLDELVIK 513
           K   A ELL+ ++ K
Sbjct: 508 KTEEALELLNVMINK 522



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 165/349 (47%), Gaps = 37/349 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFRE 256
           + PN   +  +++  C RG +  A  VL EM  +   + P +     +++  C+ G FR 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMC--HVILEAACRGGGFRS 161

Query: 257 AIELFEEMVSKDQIL----------------------------------PDALTYNVLID 282
           A+   + + +K   L                                  PD ++YN ++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   + D  +++M  M   GC PNV  + TL+   C+ G  ++  E   +M      P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y T+I+  C+ G  + A ++L  M   G K ++V +N +L GLC   + EEA  +L
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +++ +   L+  ++ I+++F CQ G +++ IELL  ML  G +P   T   ++   CK 
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G+ ++A + L  +   G KP + S+ ++++ +CR  + + A EL+  ++
Sbjct: 402 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI 450



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 161/318 (50%), Gaps = 8/318 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N   Y T+L  L   +++E  + +L +M  E C   +  F  L+  F    L +RV
Sbjct: 313 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRV 372

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +E+  ++  H      P +   +T +N   +   VD A   LK +      KPNT  + I
Sbjct: 373 IELLEQMLEHGCI---PDVITYTTVINGFCKEGLVDEAVMLLK-NMSACGCKPNTISYTI 428

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++K  C+      A E++  M + Q   PN +T++TLI+ +CK G   +AIEL ++M+  
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQ-QGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLV- 486

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           +   PD ++Y+ +IDG  + GK + A +++  M N G  PN   Y+++ +   +EG+  +
Sbjct: 487 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDK 546

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
             ++FD +++  ++ D   Y  +I+  C+    D A++    M   GC  +  T+ I++ 
Sbjct: 547 IIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIR 606

Query: 388 GLCREGKIEEALGMLEKL 405
           GL  EG + EA  +L +L
Sbjct: 607 GLASEGLVREAQDLLSEL 624



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 149/314 (47%), Gaps = 7/314 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N +I  +C+ G + +A  +   +       PN  TY  ++  LC  G   +A+ + +EM
Sbjct: 79  YNAMIAGYCRAGQVAAARRLAAAVPVP----PNAYTYFPIVRSLCARGLIADALTVLDEM 134

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +       + + V+++  CRGG    A + ++ +   GC  +  N   +++  C++G 
Sbjct: 135 PLRGCAATPPMCH-VILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGC 193

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + E  E+  ++ +F  +PD + Y  ++   C A R D+  EL+ EM   GC  ++ TFN 
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNT 253

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR G  E+    L ++   G   +   Y  +++  C+ G  E A ++L  M   G
Sbjct: 254 LIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG 313

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+    N +L  LC A   E+A   L  + +     +  ++ +LV+  C+   +    
Sbjct: 314 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 373

Query: 505 ELLDELVIKESGTI 518
           ELL++++  E G I
Sbjct: 374 ELLEQML--EHGCI 385



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 7/269 (2%)

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S LI  LC  GR  +A    +       ++     YN +I G+CR G+V  A+++   + 
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAGVV----AYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                PN + Y  ++   C  G + +A  V DEM              ++   CR G   
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A+  L+ +  +GC  D    N+++  +C +G ++E + +L KL   G   +  SY  VL
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
              C     +   EL+  M+  G  P+ AT N L+  LC+ G+ E    AL  + E G  
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
           P+   +A +++ IC+      A ++L  +
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRM 309



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 7/185 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   N  T+ T+++ + +    E    +L+QM    C      +  ++         E
Sbjct: 451 QQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 510

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVD-LAQNFLKYSNQHLRLKPNTCIF 205
             LE+ + +  I +   P+    S+  + L    + D + Q F   S Q   ++ +  ++
Sbjct: 511 EALELLNVM--INKGITPNTIIYSSMASALSREGRTDKIIQMF--DSIQDATVRSDAALY 566

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N +I   CKR   + A +    M  S    PN  TY+ LI GL   G  REA +L  E+ 
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYM-VSNGCMPNESTYTILIRGLASEGLVREAQDLLSELC 625

Query: 266 SKDQI 270
           S+  +
Sbjct: 626 SRRAV 630


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 202/404 (50%), Gaps = 10/404 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY  +L  L R  + +   A++ +MT  +       +  L    +      
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317

Query: 148 RVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            +L +F +    + +K  +    TC   LN L +  +V  A+  L+    H  L P T I
Sbjct: 318 TMLSLFGE----SLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML-VHTGLVPTTAI 372

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI  +C+   L+ AF + ++MK   +  P+ ITY+ LI+GLCK     EA +L  EM
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIR-PDHITYNALINGLCKMEMITEAEDLVMEM 431

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  + P   T+N LID + R G++++   ++  M++ G   NV ++ +++  FCK GK
Sbjct: 432 -EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGK 490

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  + D+M +  + P+   Y ++I+ +  +G  ++A  L+++MK  G  A I T+N+
Sbjct: 491 IPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNL 550

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L GLC+  +I+EA  ++  L   G+  +  SY  +++  C KG+ ++A+ELL+ M    
Sbjct: 551 LLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
             P   T + LL  L  AG   D       +V    +P S  + 
Sbjct: 611 IRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYG 654



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 185/354 (52%), Gaps = 10/354 (2%)

Query: 163 KPSLKAISTCLNLLIES-----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           +  L ++S+C NLL+ES        D+   F        R  P+T  +N  ++     G 
Sbjct: 117 RSPLPSLSSC-NLLLESLLSVGRHADVRAAFGLLVAAGAR--PDTFAWNKAVQACVAAGD 173

Query: 218 LESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           L+ A  +L+ M +S+ + P +  +Y+ +I GL ++G+  +A+++F+EMV +  + P+ +T
Sbjct: 174 LDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDR-GVAPNQIT 232

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN +IDG  +GG ++   ++ + M  +G  PNV  Y  L++G C+ G++ E + + DEM 
Sbjct: 233 YNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMT 292

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           ++ + PD   Y+ L +   R G     L L  E  ++G      T +I+L GLC++GK+ 
Sbjct: 293 SYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVA 352

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +A  +LE L + G+    A Y  ++N  CQ  +L+ A  +   M  R   P + T N L+
Sbjct: 353 KAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALI 412

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             LCK  M  +A   +  + + G  P  +++  L++   R  +L   F +L ++
Sbjct: 413 NGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDM 466



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 161/346 (46%), Gaps = 35/346 (10%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN   +N+L+   C+ G ++    ++ EM    M  P+  TYS L DGL + G  R  +
Sbjct: 262 KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM-LPDGFTYSILFDGLTRTGDSRTML 320

Query: 259 ELFEEMVSKDQIL----------------------------------PDALTYNVLIDGF 284
            LF E + K  I+                                  P    YN LI+G+
Sbjct: 321 SLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGY 380

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+   +  A  I E MK+    P+   Y  L+NG CK   + EA+++  EM+   + P  
Sbjct: 381 CQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSV 440

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             + TLI+ + RAG++++   +L +M+++G K+++++F  ++   C+ GKI EA+ +L+ 
Sbjct: 441 ETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDD 500

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           + +  +  N   Y  +++   + G  E+A  L+  M   G      T N LL  LCK   
Sbjct: 501 MIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQ 560

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            ++A   ++ L   G +P+  S+  ++   C       A ELL E+
Sbjct: 561 IDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEM 606



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 26/251 (10%)

Query: 32  VIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVS--EQK 89
           V++      DP VET +T +DA        +G A  L KC          F  +S  + K
Sbjct: 428 VMEMEKSGVDPSVETFNTLIDA--------YGRAGQLEKC----------FTVLSDMQDK 469

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  ++ +++    +  K     A+L  M ++    +  ++ +++  +      E+ 
Sbjct: 470 GIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQA 529

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNIL 208
             +  K+   +    S+   +  L  L +++Q+D A+  +   +NQ LR  P+   +N +
Sbjct: 530 FLLVEKMKS-SGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLR--PDVVSYNTI 586

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   C +G  + A E+L+EM K  +  P L TY  L+  L   GR  +   L++ MV K+
Sbjct: 587 ISACCNKGDTDRALELLQEMHKYDIR-PTLRTYHPLLSALGSAGRVHDMECLYQHMVHKN 645

Query: 269 QILPDALTYNV 279
            + P +  Y  
Sbjct: 646 -VEPSSSIYGT 655



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 13/296 (4%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   I++ A I+ + C+ E     E      E+ G + +  T+ T++D   R  + E   
Sbjct: 402 RPDHITYNALINGL-CKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHF-SNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
            VL  M  +  K +   F +++K F  N  + E V  +   IH      P+ +  ++ ++
Sbjct: 461 TVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDV--VPNAQVYNSIID 518

Query: 175 LLIESNQVDLAQNFLKYSN-QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
             IES   +  Q FL     +   +  +   +N+L+K  CK   ++ A E++  +  +Q 
Sbjct: 519 AYIESGGTE--QAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLT-NQG 575

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
             P++++Y+T+I   C  G    A+EL +EM   D I P   TY+ L+      G+V   
Sbjct: 576 LRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD-IRPTLRTYHPLLSALGSAGRVHDM 634

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ----EAKEVFDEMKNFLLKPDTI 345
           + + + M +    P+   Y T      K   L+    E    FD+ +   L+ D I
Sbjct: 635 ECLYQHMVHKNVEPSSSIYGTRCENESKVASLKKEMSEKGIAFDDTERTNLELDRI 690


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 232/477 (48%), Gaps = 38/477 (7%)

Query: 69  IKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF 128
           ++  ++P+ A+  F    +QK + H    + ++++ L        +  V  ++       
Sbjct: 124 VELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLM 183

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            E    +L+K F N  L E +L ++ ++     + PSL   +  +N L+ S  ++ A+  
Sbjct: 184 TESAANSLIKSFGNLGLVEELLWVWRRMKENGID-PSLYTYNFLVNGLVNSMFIESAEKV 242

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-----KKSQMSYPNLI---- 239
            +  +   ++ P+T  +NI+IK +CK G L+ A E  ++M     K  +++Y  LI    
Sbjct: 243 FEVMDGG-KIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACY 301

Query: 240 -------------------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
                                    +YS +I GLCK  +  EA  +FE M  K     + 
Sbjct: 302 SERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKG-CRANV 360

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
             Y  LID + + G ++ A ++ E MKN G  P+   Y+ L+NG CK G+L +  E+FD 
Sbjct: 361 AIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF 420

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
            +N  +  + + Y +LI+   +AGR+++A  L +EM E+GC  D   +N I+  L + GK
Sbjct: 421 CRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGK 480

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           I++AL +  ++  +G      ++ I+++   ++ + E+AI+    M+ +G  P  A+   
Sbjct: 481 IDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRA 540

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           L + LC  G    A   L  L  MG  PE+ ++  ++  +C+ +++  A +L D +V
Sbjct: 541 LAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIV 596



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 73/322 (22%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E++G      +Y+ ++  L + +K     AV   M  + C+ +  I+  L+  +S     
Sbjct: 317 EERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSM 376

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E  + +F ++                                     ++   +P+   ++
Sbjct: 377 EEAMRLFERM-------------------------------------KNEGFEPDAVTYS 399

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +L+   CK G L+   E+    +   ++  N + Y++LIDGL K GR  +A  LFEEM S
Sbjct: 400 VLVNGLCKSGRLDDGMELFDFCRNKGVAI-NAMFYASLIDGLGKAGRIEDAENLFEEM-S 457

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +     D+  YN +ID   + GK+D+A  +   M+  GC+  V+ +T L++G  KE K +
Sbjct: 458 EKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNE 517

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTL----------------------------------IN 352
           EA + +D+M +  + P    +  L                                  IN
Sbjct: 518 EAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMIN 577

Query: 353 CFCRAGRVDEALELLKEMKERG 374
             C+A R+ EA +L   + +RG
Sbjct: 578 TLCKAQRIKEACKLADGIVDRG 599


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 186/318 (58%), Gaps = 2/318 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ P+   F+ LI   C  G LE AF + +EM    ++ P+  T++ L+D LCK G  + 
Sbjct: 238 KISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN-PDYYTFNILVDALCKEGNLKG 296

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +   M+ K+ ++P+ +TY+ L+DG+C   +V++AK ++  +   G  PN  +Y T++
Sbjct: 297 AKNMLVVMM-KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMI 355

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NGFCK   + EA  +F++M+   + PD + Y +LI+  C++GR+  A EL+ EM + G  
Sbjct: 356 NGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQP 415

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           A+I T+N ++  LC+   +++A+ +++K+   GI  +  ++ I++   C+ G L+ A ++
Sbjct: 416 ANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDV 475

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + +L +G+  +  T N ++  LCK G+ ++A   L  + + G  P++ ++  L++ +  
Sbjct: 476 FQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFH 535

Query: 497 GRKLLFAFELLDELVIKE 514
             +   A +LL E++ ++
Sbjct: 536 KDENEKAEKLLREMIARD 553



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 172/315 (54%), Gaps = 6/315 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           + P+   FNILI  +C    +  AF ++ ++ K  M Y P+ IT++TLI GLC NG+ +E
Sbjct: 99  ITPDIFTFNILINCYCHMAEMNFAFSMMAKILK--MGYEPDTITFNTLIKGLCLNGKVKE 156

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+   + +++    L D  +Y  LI+G C+ G+   A +++  +       NV  Y T++
Sbjct: 157 ALHFHDHVLALGFHL-DQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTII 215

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +  CK   + +A E++ +M    + PD + ++ LI  FC  G+++EA  L +EM  +   
Sbjct: 216 DSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN 275

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D  TFNI++  LC+EG ++ A  ML  +  +G+  N  +Y  +++  C   ++ KA  +
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELIC 495
           L  +   G  P+  +   ++   CK  M  D A++LF  ++  G  P+  ++  L++ +C
Sbjct: 336 LNTISQMGAAPNAHSYCTMINGFCKIKMV-DEALSLFNDMQFKGIAPDKVTYNSLIDGLC 394

Query: 496 RGRKLLFAFELLDEL 510
           +  ++ +A+EL+DE+
Sbjct: 395 KSGRISYAWELVDEM 409



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 166/333 (49%), Gaps = 6/333 (1%)

Query: 185 AQNFLKYSNQHLRLKPNTCI--FNILIKHHCKRGT--LESAFEVLKEMKKSQMSYPNLIT 240
             N +   N  LR KP + I  FN ++    K       +A  + + ++   ++ P++ T
Sbjct: 47  VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGIT-PDIFT 105

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           ++ LI+  C       A  +  +++ K    PD +T+N LI G C  GKV  A    + +
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKIL-KMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHV 164

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G + + F+Y TL+NG CK G+ + A ++  ++   L+K + + Y T+I+  C+   V
Sbjct: 165 LALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLV 224

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            +A EL  +M  +    D+VTF+ ++ G C  G++EEA G+  ++    I  +  ++ I+
Sbjct: 225 IDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNIL 284

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++  C++G L+ A  +L +M+  G +P+  T + L+   C       A   L  + +MG 
Sbjct: 285 VDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGA 344

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            P + S+  ++   C+ + +  A  L +++  K
Sbjct: 345 APNAHSYCTMINGFCKIKMVDEALSLFNDMQFK 377



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 142/269 (52%), Gaps = 3/269 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   S+ ++     NQV+ A++ L   +Q +   PN   +  +I   CK   ++ A  
Sbjct: 311 PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQ-MGAAPNAHSYCTMINGFCKIKMVDEALS 369

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  +M+   ++ P+ +TY++LIDGLCK+GR   A EL +EM    Q   +  TYN LID 
Sbjct: 370 LFNDMQFKGIA-PDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQP-ANIFTYNCLIDA 427

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+   VD+A  +++ +K+ G  P+++ +  L+ G CK G+L+ A++VF ++ +     +
Sbjct: 428 LCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVN 487

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y  ++N  C+ G  DEA  LL +M + G   D VT+  ++  L  + + E+A  +L 
Sbjct: 488 AWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLR 547

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           ++    +        +VL+   +  + EK
Sbjct: 548 EMIARDVVYALEGLEMVLHLESEAKDQEK 576



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 83/175 (47%), Gaps = 35/175 (20%)

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + PD   +  LINC+C    ++ A  ++ ++ + G + D +TFN ++ GLC  GK++EAL
Sbjct: 99  ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
              + +   G +L++ SY  ++N  C+ GE   A+++LR +                   
Sbjct: 159 HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI------------------- 199

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
                  D  +    +V          +  +++ +C+ + ++ A+EL  +++ K+
Sbjct: 200 -------DGKLVKINVV---------MYNTIIDSLCKHKLVIDAYELYSQMIAKK 238


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 232/477 (48%), Gaps = 38/477 (7%)

Query: 69  IKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF 128
           ++  ++P+ A+  F    +QK + H    + ++++ L        +  V  ++       
Sbjct: 122 VELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLM 181

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            E    +L+K F N  L E +L ++ ++     + PSL   +  +N L+ S  ++ A+  
Sbjct: 182 TESAANSLIKSFGNLGLVEELLWVWRRMKENGID-PSLYTYNFLVNGLVNSMFIESAEKV 240

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-----KKSQMSYPNLI---- 239
            +  +   ++ P+T  +NI+IK +CK G L+ A E  ++M     K  +++Y  LI    
Sbjct: 241 FEVMDGG-KIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACY 299

Query: 240 -------------------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
                                    +YS +I GLCK  +  EA  +FE M  K     + 
Sbjct: 300 SERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKG-CRANV 358

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
             Y  LID + + G ++ A ++ E MKN G  P+   Y+ L+NG CK G+L +  E+FD 
Sbjct: 359 AIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF 418

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
            +N  +  + + Y +LI+   +AGR+++A  L +EM E+GC  D   +N I+  L + GK
Sbjct: 419 CRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGK 478

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           I++AL +  ++  +G      ++ I+++   ++ + E+AI+    M+ +G  P  A+   
Sbjct: 479 IDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRA 538

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           L + LC  G    A   L  L  MG  PE+ ++  ++  +C+ +++  A +L D +V
Sbjct: 539 LAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIV 594



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 73/322 (22%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E++G      +Y+ ++  L + +K     AV   M  + C+ +  I+  L+  +S     
Sbjct: 315 EERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSM 374

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E  + +F ++                                     ++   +P+   ++
Sbjct: 375 EEAMRLFERM-------------------------------------KNEGFEPDAVTYS 397

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +L+   CK G L+   E+    +   ++  N + Y++LIDGL K GR  +A  LFEEM S
Sbjct: 398 VLVNGLCKSGRLDDGMELFDFCRNKGVAI-NAMFYASLIDGLGKAGRIEDAENLFEEM-S 455

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +     D+  YN +ID   + GK+D+A  +   M+  GC+  V+ +T L++G  KE K +
Sbjct: 456 EKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNE 515

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTL----------------------------------IN 352
           EA + +D+M +  + P    +  L                                  IN
Sbjct: 516 EAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMIN 575

Query: 353 CFCRAGRVDEALELLKEMKERG 374
             C+A R+ EA +L   + +RG
Sbjct: 576 TLCKAQRIKEACKLADGIVDRG 597


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 178/330 (53%), Gaps = 8/330 (2%)

Query: 189 LKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
           L++ NQ L+   KP    + ILI+    +G ++ A ++L EM +  +  P++ TY+++I 
Sbjct: 181 LEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQ-PDMFTYNSIIR 239

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G+C+ G    A ++   + SK    PD +TYN+L+ G    GK +   ++M  M   GC 
Sbjct: 240 GMCREGYVDRAFQIISSISSKGYA-PDVITYNILLRGLLNQGKWEAGYELMSDMVARGCE 298

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            NV  Y+ L++  C++GK++E   +  +MK   LKPD   Y  LI   C+ GRVD A+E+
Sbjct: 299 ANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEV 358

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L  M   GC  DIV +N IL  LC++ + +EAL + EKL   G   N +SY  + +    
Sbjct: 359 LDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWS 418

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF---KPE 483
            G   +A+ ++  ML +G  P   T N L+  LC+ GM  D AI L   +EM     KP 
Sbjct: 419 TGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMV-DEAIELLVDMEMESSECKPS 477

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
             S+ +++  +C+  ++  A E+L  +V K
Sbjct: 478 VVSYNIVLLGLCKVSRVSDAIEVLAAMVDK 507



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 184/354 (51%), Gaps = 8/354 (2%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
            KP +   +  ++ L  S  +D A   +     H    P+   +N +I   C+   ++SA
Sbjct: 88  HKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH--PDLIAYNAIITGFCRANRIDSA 145

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           ++VL  MK    S P+++TY+ LI  LC  G    A+E F+  + K+   P  +TY +LI
Sbjct: 146 YQVLDRMKNKGFS-PDIVTYNILIGSLCSRGMLDSALE-FKNQLLKENCKPTVVTYTILI 203

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           +     G +D A K+++ M      P++F Y +++ G C+EG +  A ++   + +    
Sbjct: 204 EATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYA 263

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD I Y  L+      G+ +   EL+ +M  RGC+A++VT+++++  +CR+GK+EE +G+
Sbjct: 264 PDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGL 323

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L+ +   G+  +   Y  ++   C++G ++ AIE+L +M+  G +P     N +L  LCK
Sbjct: 324 LKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCK 383

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSW-ALLVELICRG---RKLLFAFELLDELV 511
              A++A      L E+G  P + S+ ++   L   G   R L    E+LD+ V
Sbjct: 384 QKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGV 437



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 156/303 (51%), Gaps = 3/303 (0%)

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +   CK G    +   L+ +  ++   P+++  + LI GL  +    +AI++    + ++
Sbjct: 64  LSRSCKAGNFNESLYFLRHLV-NKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMH--ILEN 120

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              PD + YN +I GFCR  ++D A ++++ MKN G +P++  Y  L+   C  G L  A
Sbjct: 121 HGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSA 180

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            E  +++     KP  + YT LI      G +DEA++LL EM E   + D+ T+N I+ G
Sbjct: 181 LEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRG 240

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +CREG ++ A  ++  +   G   +  +Y I+L     +G+ E   EL+  M+ RG   +
Sbjct: 241 MCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEAN 300

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T + L+  +C+ G  E+    L  + + G KP+   +  L+  +C+  ++  A E+LD
Sbjct: 301 VVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLD 360

Query: 509 ELV 511
            ++
Sbjct: 361 VMI 363



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 191/394 (48%), Gaps = 6/394 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + KGF+ +  TY  ++  L      ++      Q+  E CK     +  L++        
Sbjct: 153 KNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGI 212

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +  +++  ++  I  + P +   ++ +  +     VD A   +  S       P+   +N
Sbjct: 213 DEAMKLLDEMLEINLQ-PDMFTYNSIIRGMCREGYVDRAFQIIS-SISSKGYAPDVITYN 270

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           IL++    +G  E+ +E++ +M  ++    N++TYS LI  +C++G+  E + L ++M  
Sbjct: 271 ILLRGLLNQGKWEAGYELMSDMV-ARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM-K 328

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + PD   Y+ LI   C+ G+VD A ++++ M ++GC P++ NY T++   CK+ +  
Sbjct: 329 KKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRAD 388

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +F+++      P+   Y ++ +     G    AL ++ EM ++G   D +T+N ++
Sbjct: 389 EALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLI 448

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKA--SYRIVLNFSCQKGELEKAIELLRLMLCRG 444
             LCR+G ++EA+ +L  +  +      +  SY IVL   C+   +  AIE+L  M+ +G
Sbjct: 449 SCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKG 508

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
             P+  T   L+  +   G   DA      LV M
Sbjct: 509 CRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM 542



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 17/296 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +I +++S  KG+  +  TY  +L  L    K+EA   ++  M    C+ +   +  L+
Sbjct: 250 AFQIISSIS-SKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLI 308

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSN 193
                    E  + +   +     +K  LK    C + LI +     +VDLA   L    
Sbjct: 309 SSVCRDGKVEEGVGLLKDM-----KKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
                 P+   +N ++   CK+   + A  + +++ +   S PN  +Y+++   L   G 
Sbjct: 364 SD-GCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCS-PNASSYNSMFSALWSTGH 421

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI---MEFMKNNGCNPNVF 310
              A+ +  EM+ K  + PD +TYN LI   CR G VD A ++   ME M+++ C P+V 
Sbjct: 422 KVRALGMILEMLDK-GVDPDGITYNSLISCLCRDGMVDEAIELLVDME-MESSECKPSVV 479

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           +Y  ++ G CK  ++ +A EV   M +   +P+   YT LI      G +++A +L
Sbjct: 480 SYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 190/352 (53%), Gaps = 11/352 (3%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
            T +N L +  Q   A   L+  +  L ++PN  ++N +I   CK   +  AF++  EM 
Sbjct: 147 GTLINGLCKVGQARAALQLLRRVDGKL-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
              +S P+++TYS LI G    G+ ++AI+LF +M+ ++ I PD  T+N+L+DGFC+ GK
Sbjct: 206 SEGIS-PDVVTYSALISGFFIVGKLKDAIDLFNKMILEN-IKPDVYTFNILVDGFCKDGK 263

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +   K +   M   G  PNV  Y +LM+G+C   ++ +A  +F+ M    + PDT  Y  
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +IN FC+  +VDEA+ L K+M  +    ++VT+  ++ GLC+ GKI  AL +++++   G
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRL--------MLCRGFLPHYATSNELLVRLCK 461
           +  +  +Y  +L+  C+  +++KAI LL          +  +G+         ++   C 
Sbjct: 384 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCV 443

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G+  +A   L  + + G  P++ ++ +++  + +  +   A +LL E++ +
Sbjct: 444 KGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 495



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 146/258 (56%), Gaps = 10/258 (3%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            +KP+   FNIL+   CK G ++    V   M K  +  PN++TY +L+DG C   +  +
Sbjct: 243 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK-PNVVTYCSLMDGYCLVKQVNK 301

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +F  M ++  + PD  +YN++I+GFC+  KVD A  + + M      PNV  YT+L+
Sbjct: 302 ANSIFNTM-AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLI 360

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE---- 372
           +G CK GK+  A ++ DEM +  + PD I Y+++++  C+  +VD+A+ LL ++K+    
Sbjct: 361 DGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFE 420

Query: 373 ----RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
               +G   D+  + +++ G C +G   EAL +L K+  +G   +  +Y I++    +K 
Sbjct: 421 DLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKD 480

Query: 429 ELEKAIELLRLMLCRGFL 446
           E + A +LLR M+ RG L
Sbjct: 481 ENDMAEKLLREMIARGLL 498



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 59/348 (16%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +  N    NILI    + G    +F V   + K     PN+IT +TLI GLC        
Sbjct: 91  IASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYD-PNVITLTTLIKGLCL------- 142

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
                            ++Y  LI+G C+ G+   A +++  +      PNV  Y T+++
Sbjct: 143 ----------------KVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIID 186

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK   + EA +++ EM +  + PD + Y+ LI+ F   G++ +A++L  +M     K 
Sbjct: 187 SMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKP 246

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGI------------------YLNKA---- 415
           D+ TFNI++ G C++GK++E   +   +   GI                   +NKA    
Sbjct: 247 DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIF 306

Query: 416 -------------SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
                        SY I++N  C+  ++++A+ L + M C+  +P+  T   L+  LCK+
Sbjct: 307 NTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKS 366

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G    A   +  + + G  P+  +++ +++ +C+  ++  A  LL +L
Sbjct: 367 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKL 414



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 141/288 (48%), Gaps = 14/288 (4%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +  +  ++  L K   +  AI L  +M  K  I  + +T N+LI+ F + G+   +  
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELKG-IASNLVTLNILINCFSQLGQNPLSFS 116

Query: 296 IMEFMKNNGCNPNVF-------------NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           +   +   G +PNV              +Y TL+NG CK G+ + A ++   +   L++P
Sbjct: 117 VFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQP 176

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y T+I+  C+   V+EA +L  EM   G   D+VT++ ++ G    GK+++A+ + 
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            K+  + I  +  ++ I+++  C+ G++++   +  +M+ +G  P+  T   L+   C  
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 296

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                A      + + G  P++ S+ +++   C+ +K+  A  L  ++
Sbjct: 297 KQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKM 344


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 230/483 (47%), Gaps = 50/483 (10%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-TC 126
           LI  +K    ALE F   S    F H+ +TY  ++ KL  +++F+ V  +L +M +    
Sbjct: 42  LILDQKSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGA 101

Query: 127 KFHEGIFLNLMKHFSNCSLHE---RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
              + IF+ +++      +     +VL++ +K H      PSLK  ++ L++L++ + +D
Sbjct: 102 PPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHG----SPSLKIFNSILDVLVKED-ID 156

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
           +A+ F + S     ++ +   F IL+K  C    +   F++L ++ KS+   PN + Y+T
Sbjct: 157 MAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLL-QLIKSRGVAPNTVVYNT 215

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           L+  LC+NG+   A  L  EM       P+ +T+N+LI G+C+ G   +A  ++E   + 
Sbjct: 216 LLHALCRNGKVGRARNLMNEMED-----PNDVTFNILISGYCKEGNSVQALVLLEKSFSM 270

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P+V + T ++   C  G+  EA EV + +++     D + Y TLI  FC AG+V   
Sbjct: 271 GFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVG 330

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           L  LK+M+ +GC  ++ T+N+++ G    G ++ AL +   +  DGI  N  ++  ++  
Sbjct: 331 LHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRG 390

Query: 424 SCQKGELEKAIELLRLM-----LCRGFLPHYAT-------------SNELLVRL------ 459
            C +  +E    +L LM       RG +  Y +             S E L ++      
Sbjct: 391 LCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPR 450

Query: 460 -----------CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
                      CK G  EDA      +++ G  P    +  LV    +   +  A EL++
Sbjct: 451 AVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMN 510

Query: 509 ELV 511
           E++
Sbjct: 511 EMI 513



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 211/454 (46%), Gaps = 49/454 (10%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           + +ILD L +     A +   + M     +  +  F  LMK      L  R+ E F  + 
Sbjct: 143 FNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYTFGILMK---GLCLTNRIGEGFKLLQ 199

Query: 158 PITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
            I      P+    +T L+ L  + +V  A+N +          PN   FNILI  +CK 
Sbjct: 200 LIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED-----PNDVTFNILISGYCKE 254

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G    A  VL E   S    P++++ + +++ LC  GR  EA E+ E + S   +L D +
Sbjct: 255 GNSVQAL-VLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLL-DVV 312

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
            YN LI GFC  GKV      ++ M+N GC PNV  Y  L++GF + G L  A ++F++M
Sbjct: 313 AYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDM 372

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEA---LELLKEMKERGCKADIVTFNIILGGL--- 389
           K   +K + + + TLI   C   R+++    LEL++E KE G +  I  +N I+ GL   
Sbjct: 373 KTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKE-GSRGHISPYNSIIYGLLKK 431

Query: 390 ------------------------------CREGKIEEALGMLEKLWYDGIYLNKASYRI 419
                                         C++G IE+A  + +++  +G   +   Y  
Sbjct: 432 NGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNC 491

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++   ++G + +A+EL+  M+     P  +T N ++   C+ G  E A   +  +   G
Sbjct: 492 LVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARG 551

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P +++++ L++++CR   L  A ++  ++V K
Sbjct: 552 CVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDK 585



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 151/299 (50%), Gaps = 13/299 (4%)

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           A +T +     + +V +  +FLK       L PN   +N+LI    + G L+ A ++  +
Sbjct: 313 AYNTLIKGFCGAGKVKVGLHFLKQMENKGCL-PNVDTYNVLISGFSESGMLDLALDLFND 371

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM-----VSKDQILPDALTYNVLID 282
           MK   + + N +T+ TLI GLC   R  +   + E M      S+  I P    YN +I 
Sbjct: 372 MKTDGIKW-NFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISP----YNSIIY 426

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G  +    D + + +  M N    P   + + ++   CK+G +++AK V+D+M +    P
Sbjct: 427 GLLKKNGFDESAEFLTKMGN--LFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIP 484

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
             + Y  L++ F + G V EA+EL+ EM    C     TFN ++ G CR+GK+E AL ++
Sbjct: 485 SILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLV 544

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           E +   G   N  +Y  +++  C+ G+L+KA+++   M+ +G LP     N LL+ L +
Sbjct: 545 EDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQ 603



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 36/263 (13%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +  ++   ES  +DLA +          +K N   F+ LI+  C    +E  F 
Sbjct: 344 PNVDTYNVLISGFSESGMLDLALDLFNDMKTD-GIKWNFVTFDTLIRGLCSEERIEDGFS 402

Query: 224 VLKEMKKS-QMSYPNLITYSTLIDGL---------------------------------C 249
           +L+ M++S + S  ++  Y+++I GL                                 C
Sbjct: 403 ILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHC 462

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K G   +A  ++++M+ +  I P  L YN L+ GF + G V  A ++M  M  N C P  
Sbjct: 463 KKGAIEDAKRVYDQMIDEGGI-PSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIP 521

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             +  ++ GFC++GK++ A ++ +++      P+T  Y+ LI+  CR G + +A+++  +
Sbjct: 522 STFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQ 581

Query: 370 MKERGCKADIVTFNIILGGLCRE 392
           M ++G   D+  +N +L  L +E
Sbjct: 582 MVDKGILPDLFIWNSLLLSLSQE 604


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 185/349 (53%), Gaps = 4/349 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P L      +N L +  + DLA N L    +  +++ +  I+N +I   CK   ++ AF
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYNTIIDGLCKYKHMDDAF 270

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++  +M+   +  P++ TY+ LI  LC  GR+ +A  L  +M+ K+ I PD + +N LID
Sbjct: 271 DLFNKMETKGIK-PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN-INPDLVFFNALID 328

Query: 283 GFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            F + GK+  A+K+  E +K+  C P+V  Y TL+ GFCK  +++E  EVF EM    L 
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            +T+ YTTLI+ F +A   D A  + K+M   G   DI+T+NI+L GLC  G +E AL +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            E +    + L+  +Y  ++   C+ G++E   +L   +  +G  P+  T   ++   C+
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G+ E+A      + E G  P S ++  L+    R      + EL+ E+
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 189/393 (48%), Gaps = 39/393 (9%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
            +++GA I+ +    EP  AL + N + + K    +   Y TI+D L +YK  +    + 
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYNTIIDGLCKYKHMDDAFDLF 273

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
            +M  ET      +F                       +P+         IS   N    
Sbjct: 274 NKM--ETKGIKPDVF---------------------TYNPL---------ISCLCNYGRW 301

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           S+   L  + L+ +     + P+   FN LI    K G L  A ++  EM KS+  +P++
Sbjct: 302 SDASRLLSDMLEKN-----INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           + Y+TLI G CK  R  E +E+F EM S+  ++ + +TY  LI GF +    D A+ + +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M ++G +P++  Y  L++G C  G ++ A  VF+ M+   +K D + YTT+I   C+AG
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           +V++  +L   +  +G K ++VT+  ++ G CR+G  EEA  +  ++  DG   N  +Y 
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            ++    + G+   + EL++ M   GF    +T
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 199/416 (47%), Gaps = 13/416 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G+  +  T+ T++  L ++ K     A++ +M  + C+     +  ++         +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIES-----NQVDLAQNFLKYSNQHLRLKPNT 202
             L + +K+     EK  ++A     N +I+      +  D    F K   + +  KP+ 
Sbjct: 233 LALNLLNKM-----EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI--KPDV 285

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N LI   C  G    A  +L +M +  ++ P+L+ ++ LID   K G+  EA +L++
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNIN-PDLVFFNALIDAFVKEGKLVEAEKLYD 344

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EMV      PD + YN LI GFC+  +V+   ++   M   G   N   YTTL++GF + 
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
                A+ VF +M +  + PD + Y  L++  C  G V+ AL + + M++R  K DIVT+
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
             ++  LC+ GK+E+   +   L   G+  N  +Y  +++  C+KG  E+A  L   M  
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            G LP+  T N L+    + G    +A  +  +   GF  ++ ++ L+  ++  GR
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGR 580



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 200/422 (47%), Gaps = 15/422 (3%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHERVLEMFH 154
           ++ +L  +A+  KF+ V ++  QM         +   IF+N     S  SL   +L    
Sbjct: 78  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
           K+       PS+  +++ LN     N++  A   +    + +  +P+T  F  L+    +
Sbjct: 138 KLG----YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQ 192

Query: 215 RGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
                 A  +++ M  K  Q   P+L+TY  +I+GLCK G    A+ L  +M  K +I  
Sbjct: 193 HNKASEAVALVERMVVKGCQ---PDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEA 248

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D + YN +IDG C+   +D A  +   M+  G  P+VF Y  L++  C  G+  +A  + 
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERGCKADIVTFNIILGGLCR 391
            +M    + PD + +  LI+ F + G++ EA +L  EM K + C  D+V +N ++ G C+
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             ++EE + +  ++   G+  N  +Y  +++   Q  + + A  + + M+  G  P   T
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N LL  LC  G  E A +    + +   K +  ++  ++E +C+  K+   ++L   L 
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488

Query: 512 IK 513
           +K
Sbjct: 489 LK 490



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 156/294 (53%), Gaps = 2/294 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ A  +  +M KS+  +P+++ +S L+  + K  +F   I L E+M +   I  +  TY
Sbjct: 56  LDDAIGLFGDMVKSR-PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTY 113

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           ++ I+ FCR  ++  A  I+  M   G  P++    +L+NGFC   ++ EA  + D+M  
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +PDT+ +TTL++   +  +  EA+ L++ M  +GC+ D+VT+  ++ GLC+ G+ + 
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +L K+    I  +   Y  +++  C+   ++ A +L   M  +G  P   T N L+ 
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            LC  G   DA+  L  ++E    P+   +  L++   +  KL+ A +L DE+V
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 114/227 (50%), Gaps = 4/227 (1%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K+D A  +   M  +   P++  ++ L++   K  K      + ++M+N  +  +   Y+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
             IN FCR  ++  AL +L +M + G    IVT N +L G C   +I EA+ +++++   
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   +  ++  +++   Q  +  +A+ L+  M+ +G  P   T   ++  LCK G   D 
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG-EPDL 233

Query: 469 AIALFGLVEMGFKPESDS--WALLVELICRGRKLLFAFELLDELVIK 513
           A+ L   +E G K E+D   +  +++ +C+ + +  AF+L +++  K
Sbjct: 234 ALNLLNKMEKG-KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 224/453 (49%), Gaps = 20/453 (4%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C K P  AL  F  ++ + G + +  T+ T+L  L    +      +  QM   TC+ + 
Sbjct: 127 CSKLP-FALSTFGKIT-KLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNF 188
             F  LM          R++E    +  +  +  +P+     T ++ + +      A N 
Sbjct: 185 VTFTTLMNGLCR---EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+   +   + PN  I++ +I   CK G    A  +  EM++  + +P+L TY+++I G 
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGF 300

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C +GR+ +A +L +EM+ + +I PD +TYN LI+ F + GK   A+++ + M   G  PN
Sbjct: 301 CSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
              Y+++++GFCK+ +L  A+ +F  M      P+ I + TLI+ +C A R+D+ +ELL 
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM E G  AD  T+N ++ G    G +  AL +L+++   G+  +  +   +L+  C  G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 429 ELEKAIELLRLML-----------CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
           +L+ A+E+ ++M              G  P   T N L+  L   G   +A      +  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P++ +++ +++ +C+  +L  A ++ D +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 53/461 (11%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  ++  + R ++ + V ++ ++M  +  +     F  L+K F +CS     L  F KI 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    P +   +T L+ L   ++V  A N L +       +PN   F  L+   C+ G 
Sbjct: 142 KLGLH-PDVVTFTTLLHGLCVEDRVSEALN-LFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDG------------------------------ 247
           +  A  +L  M +  +  P  ITY T++DG                              
Sbjct: 200 IVEAVALLDRMMEDGLQ-PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258

Query: 248 ------LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                 LCK+GR  +A  LF EM  K  I PD  TYN +I GFC  G+   A+++++ M 
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
               +P+V  Y  L+N F KEGK  EA+E++DEM    + P+TI Y+++I+ FC+  R+D
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  +   M  +GC  +++TFN ++ G C   +I++ + +L ++   G+  +  +Y  ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM--- 478
           +     G+L  A++LL+ M+  G  P   T + LL  LC  G  +D A+ +F +++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD-ALEMFKVMQKSKK 496

Query: 479 ---------GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                    G +P+  ++ +L+  +    K L A EL +E+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 177/359 (49%), Gaps = 48/359 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY++++D   +  + +A + +   M  + C                      
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--------------------- 392

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P+L   +T ++    + ++D     L +      L  +T  +N L
Sbjct: 393 ---------------PNLITFNTLIDGYCGAKRIDDGMELL-HEMTETGLVADTTTYNTL 436

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I      G L +A ++L+EM  S +  P+++T  TL+DGLC NG+ ++A+E+F+ M    
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 269 QIL----------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           + L          PD  TYN+LI G    GK   A+++ E M + G  P+   Y+++++G
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ +L EA ++FD M +    P+ + +TTLIN +C+AGRVD+ LEL  EM  RG  A+
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +T+  ++ G  + G I  AL + +++   G+Y +  + R +L     K EL++A+ +L
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 167/317 (52%), Gaps = 3/317 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P+   F  L+   C    +  A  +  +M ++    PN++T++TL++GLC+ GR  
Sbjct: 143 LGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIV 201

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + M+ +D + P  +TY  ++DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 202 EAVALLDRMM-EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++  CK+G+  +A+ +F EM+   + PD   Y ++I  FC +GR  +A +LL+EM ER 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+VT+N ++    +EGK  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +  LM  +G  P+  T N L+   C A   +D    L  + E G   ++ ++  L+   
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 495 CRGRKLLFAFELLDELV 511
                L  A +LL E++
Sbjct: 441 YLVGDLNAALDLLQEMI 457



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 158/307 (51%), Gaps = 14/307 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    S+ ++   + N++D A++   Y        PN   FN LI  +C    ++   E
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF-YLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM ++ +   +  TY+TLI G    G    A++L +EM+S   + PD +T + L+DG
Sbjct: 417 LLHEMTETGL-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDG 474

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L++G   EGK  EA+E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +    ++VTF  ++ G C+ 
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G++++ L +  ++   GI  N  +Y  ++    + G +  A+++ + M+  G  P   T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 453 NELLVRL 459
             +L  L
Sbjct: 655 RNMLTGL 661



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 205/447 (45%), Gaps = 37/447 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  +  +  + +   AL +   + E      N   Y+ I+D L +  +      +  
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 120 QMTYETCKFHEGIFLNLMKHFS---------NCSLHERVL-EMFHKIHPITREKPSLKAI 169
           +M        +GIF +L  + S           S  E++L EM  +     +  P +   
Sbjct: 280 EMQ------EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-----KISPDVVTY 328

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           +  +N  ++  +   A+    Y     R + PNT  ++ +I   CK+  L++A  +   M
Sbjct: 329 NALINAFVKEGKFFEAEEL--YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
                S PNLIT++TLIDG C   R  + +EL  EM ++  ++ D  TYN LI GF   G
Sbjct: 387 ATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEM-TETGLVADTTTYNTLIHGFYLVG 444

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL--------- 339
            ++ A  +++ M ++G  P++    TL++G C  GKL++A E+F  M+            
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 340 --LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             ++PD   Y  LI+     G+  EA EL +EM  RG   D +T++ ++ GLC++ +++E
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  M + +       N  ++  ++N  C+ G ++  +EL   M  RG + +  T   L+ 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPES 484
              K G    A      ++  G  P++
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 2/259 (0%)

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +AI+LF +M+ + + LP  + +  L+    R  + D    + + M+      +++++ 
Sbjct: 60  LEDAIDLFSDML-RSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+  FC   KL  A   F ++    L PD + +TTL++  C   RV EAL L  +M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            C+ ++VTF  ++ GLCREG+I EA+ +L+++  DG+   + +Y  +++  C+KG+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 434 IELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + LLR M      +P+    + ++  LCK G   DA      + E G  P+  ++  ++ 
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 493 LICRGRKLLFAFELLDELV 511
             C   +   A +LL E++
Sbjct: 299 GFCSSGRWSDAEQLLQEML 317



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 94/196 (47%)

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L +GF +   L++A ++F +M      P  + +  L+    R  R D  + L ++M+ + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + DI +FNI++   C   K+  AL    K+   G++ +  ++  +L+  C +  + +A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L   M      P+  T   L+  LC+ G   +A   L  ++E G +P   ++  +V+ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 495 CRGRKLLFAFELLDEL 510
           C+    + A  LL ++
Sbjct: 230 CKKGDTVSALNLLRKM 245


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 184/350 (52%), Gaps = 39/350 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N LI   CK   L+ A  +L EM+ +   +PN +T +TL+DGLCK+GR  EA
Sbjct: 29  VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG-CFPNSVTCTTLMDGLCKDGRMDEA 87

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +EL E M  K     D + Y  LI GFC  G +DR K++ + M   G + NV  Y+ L++
Sbjct: 88  MELLEAM-KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 146

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL----------- 366
           G C+ G+ +EA  V + M    + PD + YT LI+  C+ GR   A++L           
Sbjct: 147 GLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 206

Query: 367 ------------------------LKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
                                   L+ M E+G KAD+VT+N ++ GLC +GK++EAL + 
Sbjct: 207 SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLF 266

Query: 403 EKLWYDGIYL--NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
             ++ +   L  N  ++ +++   C++G L KA+++ R M+ +G   +  T N LL    
Sbjct: 267 NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL 326

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           KAG  ++A      ++++GF P S ++++L++  C+ R L  A  L  E+
Sbjct: 327 KAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 376



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 180/314 (57%), Gaps = 6/314 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
            NI++K  C+ G +  A  +++EM +  +S P++++Y+TLI+GLCK  + +EA+ L  EM
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVS-PDIVSYNTLINGLCKAKKLKEAVGLLLEM 59

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +     P+++T   L+DG C+ G++D A +++E MK  G + +V  Y TL++GFC  G 
Sbjct: 60  EAAG-CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L   KE+FDEM    +  + + Y+ L++  CR G+  EA  +L  M E G   D+VT+  
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC++G+   A+ +L  +   G   +  +Y ++L+  C++G +  A ++LR+M+ +G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLV---EMGFKPESDSWALLVELICRGRKLL 501
                 T N L+  LC  G   D A+ LF  +   E   +P   ++ +L+  +C+  +L 
Sbjct: 239 KKADVVTYNTLMKGLCDKGKV-DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297

Query: 502 FAFELLDELVIKES 515
            A ++  ++V K S
Sbjct: 298 KAVKIHRKMVKKGS 311



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 202/410 (49%), Gaps = 39/410 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TYET-----CK----FH 129
           KG + N  TY+ ++  L R  +++  + VL  M          TY       CK     H
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191

Query: 130 EGIFLNLMKH-------------FSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLN 174
               LNLM                S       V++ F  +  +  +  K  +   +T + 
Sbjct: 192 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 251

Query: 175 LLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
            L +  +VD A       + N++  L+PN   FN+LI   CK G L  A ++ ++M K +
Sbjct: 252 GLCDKGKVDEALKLFNSMFDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK-K 309

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            S  NL+TY+ L+ G  K G+ +EA+EL+++++     +P++ TY++LIDGFC+   ++ 
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG-FVPNSFTYSILIDGFCKMRMLNI 368

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           AK +   M+ +G NP +F+Y TLM   CKEG L++AK +F EM N   +PD I + T+I+
Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 428

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              +AG      EL  +M E G + D +TF+ ++  L + G+++EA   LE++   G   
Sbjct: 429 GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTP 488

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +   Y  +L     KG+  + I LL  M  +G +      + +L  LC +
Sbjct: 489 DALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 538



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 172/319 (53%), Gaps = 10/319 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +  N   ++ L+   C+ G  + A  VL  M +  + +P+++TY+ LIDGLCK+GR   A
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI-HPDVVTYTGLIDGLCKDGRATHA 192

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L   MV K +  P  +TYNVL+ G C+ G V  A KI+  M   G   +V  Y TLM 
Sbjct: 193 MDLLNLMVEKGEE-PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 251

Query: 318 GFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           G C +GK+ EA ++F+ M      L+P+   +  LI   C+ GR+ +A+++ ++M ++G 
Sbjct: 252 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 311

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             ++VT+N++LGG  + GKI+EA+ + +++   G   N  +Y I+++  C+   L  A  
Sbjct: 312 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKG 371

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG---FKPESDSWALLVE 492
           L   M   G  P     N L+  LCK G  E A  +LF   EMG    +P+  S+  +++
Sbjct: 372 LFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK-SLF--QEMGNANCEPDIISFNTMID 428

Query: 493 LICRGRKLLFAFELLDELV 511
              +     F  EL  ++V
Sbjct: 429 GTLKAGDFQFVKELQMKMV 447



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 203/428 (47%), Gaps = 8/428 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N+ T  T++D L +  + +    +L  M  +       ++  L+  F N    
Sbjct: 60  EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           +R  E+F ++  + +   +     +CL + L    Q   A   L    +H  + P+   +
Sbjct: 120 DRGKELFDEM--LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEH-GIHPDVVTY 176

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   CK G    A ++L  M + +   P+ +TY+ L+ GLCK G   +A ++   M+
Sbjct: 177 TGLIDGLCKDGRATHAMDLLNLMVE-KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 235

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNGC-NPNVFNYTTLMNGFCKEG 323
            K +   D +TYN L+ G C  GKVD A K+   M  N  C  PNVF +  L+ G CKEG
Sbjct: 236 EKGKK-ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 294

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +L +A ++  +M       + + Y  L+    +AG++ EA+EL K++ + G   +  T++
Sbjct: 295 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++ G C+   +  A G+  ++   G+      Y  ++   C++G LE+A  L + M   
Sbjct: 355 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 414

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   + N ++    KAG  +        +VEMG +P++ +++ L+  + +  +L  A
Sbjct: 415 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474

Query: 504 FELLDELV 511
              L+ +V
Sbjct: 475 KSALERMV 482


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 198/348 (56%), Gaps = 3/348 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PSLK  +  L+ L+++N+V ++         H  + P+  +F+ ++   C  G ++ A E
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIM-CHCGVTPDVYLFSTMVNAFCTGGRVDDAIE 218

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + ++M+K  ++ PN++TY+ +I GLCKNGR  EA + F+E + K+++ P  +TY VLI+G
Sbjct: 219 LFRKMEKVGVA-PNVVTYNNIIHGLCKNGRLDEAFQ-FKEKMEKERVKPSLVTYGVLING 276

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             +  + D A  I++ M + G  PN   Y TL++G+C+ G +  A ++ D+M +  + P+
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           ++   +LI  +C++ +++ A  LL+EM   G   +  TF  ++  LC + + + AL  + 
Sbjct: 337 SVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIM 396

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++       N     ++++  CQ G+  +AIEL   +L +GF  +  TSN L+  LC+AG
Sbjct: 397 EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAG 456

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             E+AA  L  ++E G   +S S+  L+   C+  K+   F+L +E+V
Sbjct: 457 SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMV 504



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 195/379 (51%), Gaps = 12/379 (3%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  T+ +++ +L    +F++    + +M     K ++G+   L+            +E++
Sbjct: 371 NQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELW 430

Query: 154 HKIHPITREKPSLKAISTCLNLLI----ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           +++      +    A +   N LI    E+   + A   LK   +   L  ++  +N LI
Sbjct: 431 YRLL-----EKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER-GLVLDSISYNTLI 484

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G +E  F++ +EM +  +  P++ TY+ L+ GLC  G+  EA  L+ E   K+ 
Sbjct: 485 LACCKEGKVEEGFKLKEEMVRRGIQ-PDMYTYNMLLHGLCNMGKIEEAGGLWHE-CKKNG 542

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             PDA TY ++IDG+C+  +V+  +K+ + M       N   Y TL+  +C+ G ++EA 
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF 602

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            + D+M++  +   +  Y++LI+     G VD A +LL EM++ G   ++V +  ++GG 
Sbjct: 603 RLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGY 662

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+ G++ +   +L+++  + ++ NK +Y I++N  C+ G ++ A +LL  M  +G +P  
Sbjct: 663 CKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDA 722

Query: 450 ATSNELLVRLCKAGMAEDA 468
            T N L    CK G  E+A
Sbjct: 723 VTYNALTNGFCKEGKMEEA 741



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 201/382 (52%), Gaps = 8/382 (2%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           +F  ++  F      +  +E+F K+  +    P++   +  ++ L ++ ++D A  F K 
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGV-APNVVTYNNIIHGLCKNGRLDEAFQF-KE 256

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +  R+KP+   + +LI    K    + A  +LKEM     + PN + Y+TLIDG C+ 
Sbjct: 257 KMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYA-PNNVVYNTLIDGYCRI 315

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G    A+++ ++M+S + I P+++T N LI G+C+  +++ A+ ++E M   G   N   
Sbjct: 316 GNISTALQIRDDMIS-NGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGT 374

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           +T++++  C + +   A     EM  +NF  KP+    T L++  C+ G+  EA+EL   
Sbjct: 375 FTSVIHRLCLKCRFDSALLFIMEMLLRNF--KPNDGLLTLLVSGLCQNGKQSEAIELWYR 432

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           + E+G  A+ VT N ++ GLC  G  EEA  +L+++   G+ L+  SY  ++   C++G+
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGK 492

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +E+  +L   M+ RG  P   T N LL  LC  G  E+A        + G  P++ ++ +
Sbjct: 493 VEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGI 552

Query: 490 LVELICRGRKLLFAFELLDELV 511
           +++  C+  ++    +L  E+V
Sbjct: 553 MIDGYCKANRVEEGEKLFQEMV 574



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 168/340 (49%), Gaps = 14/340 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS---NCS 144
           +KGF  N  T   ++  L      E    +L++M         G+ L+ + + +    C 
Sbjct: 435 EKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEM------LERGLVLDSISYNTLILACC 488

Query: 145 LHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
              +V E F     + R   +P +   +  L+ L    +++ A        ++    P+ 
Sbjct: 489 KEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF-PDA 547

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             + I+I  +CK   +E   ++ +EM   ++   N + Y TLI   C+NG  REA  L +
Sbjct: 548 YTYGIMIDGYCKANRVEEGEKLFQEMVTMKIE-QNAVVYGTLIRAYCENGNMREAFRLRD 606

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           +M S+  I   + TY+ LI G    G VD A ++++ M+  G +PNV  YT L+ G+CK 
Sbjct: 607 DMRSRG-IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKL 665

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G++ +   +  EM    + P+ I YT +IN  C+ G +  A +LL EM ++G   D VT+
Sbjct: 666 GQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTY 725

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           N +  G C+EGK+EEAL + + +   GI L+  +Y  +++
Sbjct: 726 NALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLID 765



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 172/351 (49%), Gaps = 5/351 (1%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R KPSL      +N L++  + D A   LK  +      PN  ++N LI  +C+ G + +
Sbjct: 262 RVKPSLVTYGVLINGLVKLERFDEANCILKEMSDR-GYAPNNVVYNTLIDGYCRIGNIST 320

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A ++  +M  + +S PN +T ++LI G CK+ +   A  L EEM++   ++    T+  +
Sbjct: 321 ALQIRDDMISNGIS-PNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQG-TFTSV 378

Query: 281 IDGFCRGGKVDRAKK-IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           I   C   + D A   IME +  N   PN    T L++G C+ GK  EA E++  +    
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRN-FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
              +T+    LI+  C AG  +EA +LLKEM ERG   D +++N ++   C+EGK+EE  
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            + E++   GI  +  +Y ++L+  C  G++E+A  L       G  P   T   ++   
Sbjct: 498 KLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGY 557

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           CKA   E+       +V M  +  +  +  L+   C    +  AF L D++
Sbjct: 558 CKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDM 608



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 209/467 (44%), Gaps = 19/467 (4%)

Query: 54  RKRSRFISHGAAIS-LIKCEK--EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
           R +   +++G  I+ L+K E+  E  C L+  +     +G+  NN  Y T++D   R   
Sbjct: 262 RVKPSLVTYGVLINGLVKLERFDEANCILKEMS----DRGYAPNNVVYNTLIDGYCRIGN 317

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHF--SNCSLH-ERVLEMFHKIHPITREKPSLK 167
                 +   M       +     +L++ +  SN   H E +LE       +  +     
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377

Query: 168 AIST-CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
            I   CL    +S  + + +  L+        KPN  +  +L+   C+ G    A E+  
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLR------NFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
            + +   +  N +T + LI GLC+ G   EA +L +EM+ +  +L D+++YN LI   C+
Sbjct: 432 RLLEKGFA-ANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL-DSISYNTLILACCK 489

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            GKV+   K+ E M   G  P+++ Y  L++G C  GK++EA  ++ E K     PD   
Sbjct: 490 EGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYT 549

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y  +I+ +C+A RV+E  +L +EM     + + V +  ++   C  G + EA  + + + 
Sbjct: 550 YGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR 609

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             GI    A+Y  +++     G ++ A +LL  M   G  P+      L+   CK G   
Sbjct: 610 SRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMH 669

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                L  +      P   ++ +++   C+   +  A +LL+E+  K
Sbjct: 670 KVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQK 716



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 10/346 (2%)

Query: 175 LLIESNQVD--LAQNFLKYSNQHLRLKPNTCIFNILIKHHC-----KRGTLESAFEVLKE 227
           L I SN V+   A NF  ++++ L  +P   +  + +  H      K       FE+   
Sbjct: 94  LAIGSNNVNPRTAFNFFHFASETL-FEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSL 152

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           +    + +P+L T + L+  L K    + + ++F+ M     + PD   ++ +++ FC G
Sbjct: 153 LANKGL-FPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCG-VTPDVYLFSTMVNAFCTG 210

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G+VD A ++   M+  G  PNV  Y  +++G CK G+L EA +  ++M+   +KP  + Y
Sbjct: 211 GRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTY 270

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             LIN   +  R DEA  +LKEM +RG   + V +N ++ G CR G I  AL + + +  
Sbjct: 271 GVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMIS 330

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
           +GI  N  +   ++   C+  ++E A  LL  ML  G + +  T   ++ RLC     + 
Sbjct: 331 NGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDS 390

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A + +  ++   FKP      LLV  +C+  K   A EL   L+ K
Sbjct: 391 ALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEK 436



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 137/248 (55%), Gaps = 2/248 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+   +N+L+   C  G +E A  +  E KK+  ++P+  TY  +IDG CK  R  E 
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG-NFPDAYTYGIMIDGYCKANRVEEG 566

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF+EMV+  +I  +A+ Y  LI  +C  G +  A ++ + M++ G       Y++L++
Sbjct: 567 EKLFQEMVTM-KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIH 625

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G    G +  A ++ DEM+   L P+ + YT LI  +C+ G++ +   +L+EM       
Sbjct: 626 GLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHP 685

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + +T+ I++ G C+ G ++ A  +L ++   GI  +  +Y  + N  C++G++E+A+++ 
Sbjct: 686 NKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVC 745

Query: 438 RLMLCRGF 445
            LM   G 
Sbjct: 746 DLMSTGGI 753



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 108/193 (55%), Gaps = 2/193 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           ++++ N  ++  LI+ +C+ G +  AF +  +M+   +   +  TYS+LI GL   G   
Sbjct: 576 MKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTS-ATYSSLIHGLSNIGLVD 634

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A +L +EM  K+ + P+ + Y  LI G+C+ G++ +   I++ M  N  +PN   YT +
Sbjct: 635 SANQLLDEM-RKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIM 693

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK G ++ A ++ +EM    + PD + Y  L N FC+ G+++EAL++   M   G 
Sbjct: 694 INGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGI 753

Query: 376 KADIVTFNIILGG 388
             D +T+  ++ G
Sbjct: 754 SLDDITYTTLIDG 766



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 6/226 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY  ++D   +  + E  + + ++M     + +  ++  L++ +           +   +
Sbjct: 549 TYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDM 608

Query: 157 HPITREKPSLKAI-STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
              +R  P   A  S+ ++ L     VD A   L    +   L PN   +  LI  +CK 
Sbjct: 609 R--SRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKE-GLSPNVVCYTALIGGYCKL 665

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G +     +L+EM  + + +PN ITY+ +I+G CK G  + A +L  EM  K  I+PDA+
Sbjct: 666 GQMHKVDSILQEMSINNV-HPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG-IVPDAV 723

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           TYN L +GFC+ GK++ A K+ + M   G + +   YTTL++G+ K
Sbjct: 724 TYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 30/444 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KGF  + +TY+ ++  L    K E    + ++M           +  L+  F    L E
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFN 206
           +   +F ++  +    P++   +  ++  +++ QV  A + F +  +   R  PN   + 
Sbjct: 341 QAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR--PNDVTYG 397

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMS---------------YPNLITYSTLIDGLCKN 251
            L+   CK G +  AFEV  ++  +  S                PN++TY  L+DGLCK 
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +   A EL + M+S     P+ + Y+ LIDGFC+ GK+D A+++   M   G  P+V  
Sbjct: 458 HKVDHAHELLDAMLSSG-CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 516

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT+L++   K+G+L  A +V  +M      P+ + YT +I+  CR G  ++AL+LL  M+
Sbjct: 517 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 576

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+GC  ++VT+  ++ GL + GKI+ +L +  ++   G   N  +YR+++N  C  G L+
Sbjct: 577 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE----MGFKPESDSW 487
           KA  LL  M  + + P Y          C       + IA  G++E     G  P +  +
Sbjct: 637 KARLLLGEMK-QTYWPKYLQGYR-----CAIQGFSKSFIASLGILEEMESYGTVPIAPVY 690

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
            +L++   +  +L  A EL  E++
Sbjct: 691 GMLIDCFSKAGRLEIAMELHKEMM 714



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 206/437 (47%), Gaps = 28/437 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G +    TY  ++    + K+    + +  +M    C+ ++  +  L+          + 
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 150 LEMFHKIHPITREK---------------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            E++ K+   +                  P++      ++ L ++++VD A   L  +  
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD-AML 471

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
               +PN  +++ LI   CK G ++SA EV  +M K     P++ TY++LID + K+GR 
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY-LPSVHTYTSLIDRMFKDGRL 530

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A+++  +M+ KD   P+ +TY  +IDG CR G+ ++A K++  M+  GC+PNV  YT 
Sbjct: 531 DLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G  K GK+  + ++F +M      P+ + Y  LIN  C AG +D+A  LL EMK+  
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 649

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
               +  +   + G  +      +LG+LE++   G       Y ++++   + G LE A+
Sbjct: 650 WPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 707

Query: 435 ELLRLMLCRGFLPHYATSN-----ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           EL + M+    +P    ++      L+  LC A   E+A      +   GF PE   +  
Sbjct: 708 ELHKEMM---EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVC 764

Query: 490 LVELICRGRKLLFAFEL 506
           L++ +   +K   A +L
Sbjct: 765 LIKGLVEVKKWDEALQL 781



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 206/449 (45%), Gaps = 62/449 (13%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY T+L    + K+      ++  M  E C  +  +F +L+  + N    E+     
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCN----EKDYAYA 196

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +K+         L  ++TC                           P   ++NI I   C
Sbjct: 197 YKL---------LNRMTTC------------------------GCPPGYVVYNIFIGSIC 223

Query: 214 KRGTLES------AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            +  L S      A ++  EM  +     N +  +     LC  G+F +A +L +EM+ K
Sbjct: 224 GQEKLPSPDLLDLAEKIYGEMLAANCVL-NKVNVANFARCLCGVGKFDKAFQLIKEMMRK 282

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              +PD  TY+ +I   C   KV++A  + + MK  G  P+V+ YT L++ FCK G +++
Sbjct: 283 G-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 341

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+ +F+EM++    P  + YT LI+ + +A +V +A ++   M + GC+ + VT+  ++ 
Sbjct: 342 AQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVD 401

Query: 388 GLCREGKIEEALGMLEKL----------WY------DGIYLNKASYRIVLNFSCQKGELE 431
           GLC+ G I +A  +  KL          +Y        +  N  +Y  +++  C+  +++
Sbjct: 402 GLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVD 461

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A ELL  ML  G  P++   + L+   CKAG  + A      + + G+ P   ++  L+
Sbjct: 462 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521

Query: 492 ELICRGRKLLFAFELLDELVIKESGTIQV 520
           + + +  +L  A ++L ++ +K+S T  V
Sbjct: 522 DRMFKDGRLDLAMKVLSQM-LKDSCTPNV 549



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 155/318 (48%), Gaps = 11/318 (3%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N L++     G ++  F V KEM +S     +  T       LCK GR+ +A+
Sbjct: 37  RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCM-DRFTVGCFAHALCKEGRWADAL 95

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +    M+ ++    D +    +I G       D A   +  M+ N C PNV  Y TL++G
Sbjct: 96  D----MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           F K+ +L   K + + M      P+   + +L++ +C       A +LL  M   GC   
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 379 IVTFNIILGGLCREGKI--EEALGMLEKLWYDGIYLNKASYRI-VLNFS---CQKGELEK 432
            V +NI +G +C + K+   + L + EK++ + +  N    ++ V NF+   C  G+ +K
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A +L++ M+ +GF+P  +T ++++  LC A   E A +    +  +G  P+  ++ +L++
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 493 LICRGRKLLFAFELLDEL 510
             C+   +  A  L +E+
Sbjct: 332 SFCKAGLIEQAQWLFEEM 349



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 158/372 (42%), Gaps = 53/372 (14%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L+E++  D A +FL       R++ N+CI N++        TL S F     +KK Q+ +
Sbjct: 117 LMEASYFDEAMSFLH------RMRCNSCIPNVVTYR-----TLLSGF-----LKKKQLGW 160

Query: 236 --------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
                         PN   +++L+   C    +  A +L   M +     P  + YN+ I
Sbjct: 161 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG-CPPGYVVYNIFI 219

Query: 282 DGFCRGGKV------DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
              C   K+      D A+KI   M    C  N  N        C  GK  +A ++  EM
Sbjct: 220 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PDT  Y+ +I   C A +V++A  L +EMK  G   D+ T+ I++   C+ G I
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 339

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           E+A  + E++   G      +Y  +++   +  ++ +A ++   M+  G  P+  T   L
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 399

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESD----------------SWALLVELICRGRK 499
           +  LCKAG    A      L+      +SD                ++  LV+ +C+  K
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459

Query: 500 LLFAFELLDELV 511
           +  A ELLD ++
Sbjct: 460 VDHAHELLDAML 471



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 3/178 (1%)

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           D +K+F  +P  + Y  L+     AG+VD    + KEM E G   D  T       LC+E
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G+  +AL M+E+   +   L+      +++   +    ++A+  L  M C   +P+  T 
Sbjct: 89  GRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             LL    K          +  ++  G  P    +  LV   C  +   +A++LL+ +
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 215/459 (46%), Gaps = 74/459 (16%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  +Y  +L  L   K++  V  ++ +M    C  +   F  L+ +     L ERV
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 281

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E+  ++           A   C                           P+  ++  +I
Sbjct: 282 HEVLAQM-----------AEHGC--------------------------TPDIRMYATII 304

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G L+ A E+L  M    +  PN++ Y+TL+ GLC   R+ E  EL  EM  KD 
Sbjct: 305 DGICKEGHLKVAHEILNRMPSYGLK-PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            L D +T+N+L+D FC+ G VDR  +++E M  +GC P+V  YTT++NGFCKEG + EA 
Sbjct: 364 PL-DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAV 422

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +   M     KP+TI YT ++   C A R  +A +L+ +M ++GC  + +TFN ++  L
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH- 448
           C++G +E+A+ +L+++  +G   +  SY  V++   + G+ ++A+ELL +M+ +G  P+ 
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 542

Query: 449 --YAT--------------------------------SNELLVRLCKAGMAEDAAIALFG 474
             Y++                                 N ++  LCK G  E A   L  
Sbjct: 543 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAY 602

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +V  G  P   ++ +L+  +     +  A E+L EL  K
Sbjct: 603 MVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 173/307 (56%), Gaps = 2/307 (0%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N+++   C +G+++ A  +L+++  S    P++++Y+ ++ GLC   R+    EL EEMV
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLP-SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 254

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +    P+ +T+N LI   CR G  +R  +++  M  +GC P++  Y T+++G CKEG L
Sbjct: 255 -RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHL 313

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A E+ + M ++ LKP+ + Y TL+   C A R +E  ELL EM ++ C  D VTFNI+
Sbjct: 314 KVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +   C+ G ++  + +LE++   G   +  +Y  V+N  C++G +++A+ LL+ M   G 
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+  +   +L  LC A    DA   +  +++ G      ++  L+  +C+   +  A E
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493

Query: 506 LLDELVI 512
           LL ++++
Sbjct: 494 LLKQMLV 500



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 202/423 (47%), Gaps = 10/423 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++  L    +     AVL +M    C     ++  +++           + + 
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180

Query: 154 HKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
             +H     +     +  C   LN + +   VD A + L+        +P+   +N ++K
Sbjct: 181 EDLH----ARGCALDVGNCNLVLNAICDQGSVDKALHLLR-DLPSFGCEPDVVSYNAVLK 235

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             C         E+++EM +     PN++T++TLI  LC+NG F    E+  +M ++   
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACP-PNIVTFNTLISYLCRNGLFERVHEVLAQM-AEHGC 293

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PD   Y  +IDG C+ G +  A +I+  M + G  PNV  Y TL+ G C   + +E +E
Sbjct: 294 TPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 353

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  EM +     D + +  L++ FC+ G VD  +ELL++M   GC  D++T+  ++ G C
Sbjct: 354 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFC 413

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           +EG I+EA+ +L+ +   G   N  SY IVL   C       A +L+  M+ +G   +  
Sbjct: 414 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPI 473

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N L+  LCK G+ E A   L  ++  G  P+  S++ +++ + +  K   A ELL+ +
Sbjct: 474 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533

Query: 511 VIK 513
           V K
Sbjct: 534 VNK 536



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 167/348 (47%), Gaps = 35/348 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +  +++  C RG +  A  VL EM +   + P    Y  +++  C+ G FR A
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCA-PIPPMYHVILEAACRGGGFRSA 176

Query: 258 IELFEEMVSK----------------------DQIL------------PDALTYNVLIDG 283
           + + E++ ++                      D+ L            PD ++YN ++ G
Sbjct: 177 VRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKG 236

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C   +    +++ME M    C PN+  + TL++  C+ G  +   EV  +M      PD
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y T+I+  C+ G +  A E+L  M   G K ++V +N +L GLC   + EE   +L 
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           +++     L+  ++ I+++F CQ G +++ IELL  ML  G +P   T   ++   CK G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEG 416

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + ++A + L  +   G KP + S+ ++++ +C   + + A +L+ +++
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 184/369 (49%), Gaps = 40/369 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI N +    G   N   Y T+L  L   +++E  + +L +M  + C   +  F  L+
Sbjct: 316 AHEILNRMPSY-GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILV 374

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F    L +RV+E+  ++            +  C+                        
Sbjct: 375 DFFCQNGLVDRVIELLEQM-----------LVHGCM------------------------ 399

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +  +I   CK G ++ A  +LK M       PN I+Y+ ++ GLC   R+ +A
Sbjct: 400 --PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCK-PNTISYTIVLKGLCSAERWVDA 456

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L  +M+ +   L + +T+N LI+  C+ G V++A ++++ M  NGC+P++ +Y+T+++
Sbjct: 457 EDLMSQMIQQGCPL-NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 515

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  K GK  EA E+ + M N  + P+TI Y+++ +   R GR+++ +++   +++   ++
Sbjct: 516 GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRS 575

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +N ++  LC+ G+ E A+  L  +   G   N+++Y I++     +G +++A E+L
Sbjct: 576 DAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635

Query: 438 RLMLCRGFL 446
             +  +G L
Sbjct: 636 TELCSKGAL 644



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 10/277 (3%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ ++ G C+ G+   A      + +   + P+A TY  ++   C  G++  A  +++ M
Sbjct: 93  YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              GC P    Y  ++   C+ G  + A  V +++       D      ++N  C  G V
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLC---REGKIEEALGMLEKLWYDGIYLNKASY 417
           D+AL LL+++   GC+ D+V++N +L GLC   R G ++E   ++E++       N  ++
Sbjct: 209 DKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMVRMACPPNIVTF 265

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++++ C+ G  E+  E+L  M   G  P       ++  +CK G  + A   L  +  
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPS 325

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            G KP    +  L++ +C   +     ELL E+  K+
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 29/193 (15%)

Query: 348 TTLINCFCRAGRVDEALELL------------KEMKERGCKA-----------------D 378
           ++LI   C AGR  EA   L              M    C+A                 +
Sbjct: 62  SSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAVPVPPN 121

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+  ++  LC  G+I +AL +L+++   G       Y ++L  +C+ G    A+ +L 
Sbjct: 122 AYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLE 181

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +  RG        N +L  +C  G  + A   L  L   G +P+  S+  +++ +C  +
Sbjct: 182 DLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAK 241

Query: 499 KLLFAFELLDELV 511
           +     EL++E+V
Sbjct: 242 RWGCVQELMEEMV 254


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 172/312 (55%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +NIL+   CK G   SA  +L EM++   + PN++TYSTL+   C+NG + +A  
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCA-PNIVTYSTLLHSFCRNGMWDDARA 407

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + ++M +K   + ++  YN +I    + GK+D A ++++ MK+ GC P++  Y T++   
Sbjct: 408 MLDQMSAKGFSM-NSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHL 466

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C   ++ EA+ +F  +    +  + I Y TLI+    +GR  E L L  EM   GC  D+
Sbjct: 467 CNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDV 526

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++N ++  LC+EG ++ ++ +LE++   GI  N  SY +++N  C+ G++  A+EL + 
Sbjct: 527 VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 586

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML +G  P   T N L+  LCK G    A   L  L      P+  ++ +L+   C+ R 
Sbjct: 587 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 646

Query: 500 LLFAFELLDELV 511
           L  A  LLD+ V
Sbjct: 647 LDDASMLLDKAV 658



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 166/312 (53%), Gaps = 6/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  L++  C+    + A+ +L  + +      N++  +T+I G    G+   A E
Sbjct: 283 PSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV-----NVVMLNTVIRGCLAEGKLARATE 337

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+E M SK    PD  TYN+L+ G C+ G+   A ++++ M+  GC PN+  Y+TL++ F
Sbjct: 338 LYEMMGSKG-CPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSF 396

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G   +A+ + D+M       ++ GY  +I    + G++DEA+ L++EMK +GCK DI
Sbjct: 397 CRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDI 456

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N I+  LC   +++EA  +   L  +G+  N  +Y  +++     G  ++ + L   
Sbjct: 457 CTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANE 516

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G      + N L+  LCK G  + + + L  ++  G KP + S+ +L+  +C+  K
Sbjct: 517 MVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGK 576

Query: 500 LLFAFELLDELV 511
           +  A EL  E++
Sbjct: 577 VRDALELSKEML 588



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 157/289 (54%), Gaps = 5/289 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P++   ST L+    +   D A+  L + S +   +  N+  +N +I    K G L+ A 
Sbjct: 384 PNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSM--NSQGYNGIIYALGKDGKLDEAM 441

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +++EMK SQ   P++ TY+T+I  LC N +  EA  +F  ++ ++ ++ + +TYN LI 
Sbjct: 442 RLVQEMK-SQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL-EEGVVANGITYNTLIH 499

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
                G+     ++   M  +GC  +V +Y  L+   CKEG +  +  + +EM    +KP
Sbjct: 500 ALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKP 559

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +   Y  LIN  C+AG+V +ALEL KEM  +G   DIVT+N ++ GLC+ G    AL +L
Sbjct: 560 NNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 619

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           EKL  + ++ +  +Y I++++ C+   L+ A  LL   +  G +P+  T
Sbjct: 620 EKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERT 668



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/394 (22%), Positives = 164/394 (41%), Gaps = 68/394 (17%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A + L    +   + P+   +N ++    +      A  + + M + ++  P   T+   
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVP-PTTFTFGVA 186

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDAL----------------------------- 275
              LC+ GR R+A+ L   M ++   +PDA+                             
Sbjct: 187 ARALCRLGRARDALALLRGM-ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245

Query: 276 ------TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK-------- 321
                 T+N ++ G C  G V  A ++++ M  +GC P+V  Y  L+ G C+        
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305

Query: 322 -----------------------EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
                                  EGKL  A E+++ M +    PD   Y  L++  C+ G
Sbjct: 306 AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           R   A+ +L EM+E+GC  +IVT++ +L   CR G  ++A  ML+++   G  +N   Y 
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN 425

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            ++    + G+L++A+ L++ M  +G  P   T N ++  LC     ++A      L+E 
Sbjct: 426 GIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           G      ++  L+  +    +      L +E+V+
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVL 519



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 12/310 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE----TCKFHEGIFLNLMKHFSN 142
           E+KG   N  TY+T+L    R   ++   A+L QM+ +      + + GI   L K    
Sbjct: 378 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKL 437

Query: 143 CSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
                 V EM  +       KP +   +T +  L  ++Q+D A++      +   +  N 
Sbjct: 438 DEAMRLVQEMKSQ-----GCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE-GVVANG 491

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N LI      G  +    +  EM        ++++Y+ LI  LCK G    ++ L E
Sbjct: 492 ITYNTLIHALLHSGRWQEGLRLANEMVLHGCPL-DVVSYNGLIKALCKEGNVDRSMMLLE 550

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM++K  I P+  +YN+LI+  C+ GKV  A ++ + M N G  P++  Y TL+NG CK 
Sbjct: 551 EMMTKG-IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKV 609

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G    A  + +++ N  + PD + Y  LI+  C+   +D+A  LL +    G   +  T+
Sbjct: 610 GWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTW 669

Query: 383 NIILGGLCRE 392
            +++    R+
Sbjct: 670 GMMVQNFVRQ 679


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 166/291 (57%), Gaps = 2/291 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PNT  F  LIK  C +G +  A     ++      + N I+Y TLIDGLCK G  R A++
Sbjct: 155 PNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQF-NQISYGTLIDGLCKVGETRAALD 213

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   +  K  + P+ + Y+ +IDG C+   V+ A  +   M + G +PNV  Y+ L++GF
Sbjct: 214 LLRRVDGK-LVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 272

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
              GKL++A ++F++M +  +KPD   +  L++ FC++G++  AL+L+ EM +RG   +I
Sbjct: 273 FTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNI 332

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT++ IL  LC+  ++++A+ +L KL   GI  N  +Y I+++  C  G+LE A  +   
Sbjct: 333 VTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFED 392

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           +L +G+     T   +    CK G+ ++A+  L  + E G  P++ ++ L+
Sbjct: 393 LLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 190/372 (51%), Gaps = 7/372 (1%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  IL  L + K +  V  + ++M +   K +      L+  F    L      +F KI 
Sbjct: 90  FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 149

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    P+    +T +  L    Q+  A NF       L  + N   +  LI   CK G 
Sbjct: 150 KMGYN-PNTITFTTLIKGLCLKGQIHQALNFHD-KLVALGFQFNQISYGTLIDGLCKVGE 207

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
             +A ++L+ +   ++  PN++ YST+IDG+CK+    +A +L+ EMVSK  I P+ +TY
Sbjct: 208 TRAALDLLRRVD-GKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG-ISPNVVTY 265

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           + LI GF   GK+  A  +   M +    P+V+ +  L++ FCK GK+  A ++ DEM +
Sbjct: 266 SALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHD 325

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               P+ + Y+++++  C+  RVD+A+ LL ++K++G + ++ T+ I++ GLC  GK+E+
Sbjct: 326 RGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLED 385

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  + E L   G  +   +Y ++    C+KG  ++A  LL  M   G +P   T   + +
Sbjct: 386 ARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKL 445

Query: 458 RLCKAG---MAE 466
            L K G   MAE
Sbjct: 446 SLFKKGENDMAE 457



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 146/241 (60%), Gaps = 2/241 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN  +++ +I   CK   +  AF++  EM    +S PN++TYS LI G    G+ ++A
Sbjct: 223 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS-PNVVTYSALISGFFTVGKLKDA 281

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++LF +M+S++ I PD  T+N+L+D FC+ GK+  A K+++ M + G  PN+  Y+++++
Sbjct: 282 VDLFNKMISEN-IKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 340

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK  ++ +A  +  ++K+  ++P+   YT LI+  C +G++++A  + +++  +G   
Sbjct: 341 ALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDI 400

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT+ ++  G C++G  +EA  +L K+  +G   +  +Y ++     +KGE + A +L 
Sbjct: 401 TVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLH 460

Query: 438 R 438
           R
Sbjct: 461 R 461



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 181/358 (50%), Gaps = 7/358 (1%)

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI--FNILIKHHCKR 215
           P +  K +L   S+       +N VD A +     N  LR  P      FN ++    K 
Sbjct: 44  PCSSSKINLIPYSSTSTTFHSNNDVDDAVSLF---NCLLRQNPTPPAIEFNKILGSLVKS 100

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
               +   + K+M+   +  PNL+  + LI+  C+ G    A  +F +++ K    P+ +
Sbjct: 101 KHYHTVLYLSKKMEFRGIK-PNLVNCNILINCFCQLGLIPFAFSVFAKIL-KMGYNPNTI 158

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           T+  LI G C  G++ +A    + +   G   N  +Y TL++G CK G+ + A ++   +
Sbjct: 159 TFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV 218

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
              L++P+ + Y+T+I+  C+   V++A +L  EM  +G   ++VT++ ++ G    GK+
Sbjct: 219 DGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKL 278

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           ++A+ +  K+  + I  +  ++ I+++  C+ G++  A++L+  M  RG  P+  T + +
Sbjct: 279 KDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSI 338

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L  LCK    + A   L  L + G +P   ++ +L++ +C   KL  A  + ++L++K
Sbjct: 339 LDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVK 396



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 20/288 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM------KHFSNC 143
           GF  N  +Y T++D L +  +  A   +LR++  +  + +  ++  ++      KH ++ 
Sbjct: 187 GFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDA 246

Query: 144 SLHERVLEMFHK-IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
              +   EM  K I P      +L  IS    +    + VDL    +  +     +KP+ 
Sbjct: 247 --FDLYSEMVSKGISPNVVTYSAL--ISGFFTVGKLKDAVDLFNKMISEN-----IKPDV 297

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             FNIL+   CK G +  A +++ EM       PN++TYS+++D LCK  R  +A+ L  
Sbjct: 298 YTFNILVDVFCKSGKISYALKLVDEMHDRGQP-PNIVTYSSILDALCKTHRVDKAVALLT 356

Query: 263 EMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++  KDQ I P+  TY +LIDG C  GK++ A+ I E +   G +  V  Y  +  GFCK
Sbjct: 357 KL--KDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCK 414

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           +G   EA  +  +M+     PD   Y  +     + G  D A +L +E
Sbjct: 415 KGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 192/361 (53%), Gaps = 7/361 (1%)

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
           E+F ++  ++R++ S+K+ S   +LL    ++  A+ F+ +  + L  KPN   +N +I 
Sbjct: 162 ELFDEL-TLSRDRLSVKS-SIVFDLL--EGKLKKAREFIGFM-EGLGFKPNVVSYNTIIH 216

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            +  RG +E A  +L  M+   +  P+  TY +LI G+CK GR  EA  LF++MV +  +
Sbjct: 217 GYSSRGNIEGARRILDAMRVKGIE-PDSYTYGSLISGMCKEGRLEEASGLFDKMV-EIGL 274

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +P+A+TYN LIDG+C  G ++RA    + M   G  P+V  Y  L++    EG++ EA +
Sbjct: 275 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADD 334

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +  EM+   + PD I Y  LIN + R G    A +L  EM  +G +   VT+  ++  L 
Sbjct: 335 MIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLS 394

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           R  +++EA  + EK+   G+  +   +  +++  C  G +E+A  LL+ M  +   P   
Sbjct: 395 RRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEV 454

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N L+   C+ G  E+A + L  +   G KP+  S+  L+    R   +  AF + DE+
Sbjct: 455 TFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM 514

Query: 511 V 511
           +
Sbjct: 515 L 515



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 162/295 (54%), Gaps = 2/295 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N LI  +C +G LE AF    EM K  +  P++ TY+ L+  L   GR  EA
Sbjct: 274 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI-MPSVSTYNLLVHALFMEGRMGEA 332

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ +EM  K  I+PDA+TYN+LI+G+ R G   RA  +   M + G  P    YT+L+ 
Sbjct: 333 DDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIY 391

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              +  +++EA ++F+++ +  + PD I +  +I+  C  G V+ A  LLKEM  +    
Sbjct: 392 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPP 451

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VTFN ++ G CREGK+EEA  +L+++   GI  +  SY  +++   ++G+++ A  + 
Sbjct: 452 DEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVR 511

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             ML  GF P   T N L+  LCK    + A   L  +V  G  P+  ++  L+E
Sbjct: 512 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 566



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 187/354 (52%), Gaps = 9/354 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLE 219
           KP++ + +T ++       ++ A+  L      +R+K   P++  +  LI   CK G LE
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRIL----DAMRVKGIEPDSYTYGSLISGMCKEGRLE 260

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  +  +M +  +  PN +TY+TLIDG C  G    A    +EMV K  I+P   TYN+
Sbjct: 261 EASGLFDKMVEIGL-VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK-GIMPSVSTYNL 318

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L+      G++  A  +++ M+  G  P+   Y  L+NG+ + G  + A ++ +EM +  
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           ++P  + YT+LI    R  R+ EA +L +++ ++G   D++ FN ++ G C  G +E A 
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L+++    +  ++ ++  ++   C++G++E+A  LL  M  RG  P + + N L+   
Sbjct: 439 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGY 498

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + G  +DA      ++ +GF P   ++  L++ +C+ ++   A ELL E+V K
Sbjct: 499 GRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 154/342 (45%), Gaps = 51/342 (14%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   ++ TY +++  + +  + E    +  +M       +   +  L+  + N    ER
Sbjct: 237 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 296

Query: 149 VL----EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PN 201
                 EM  K        PS+   +  ++ L    ++  A + +K     +R K   P+
Sbjct: 297 AFSYRDEMVKK-----GIMPSVSTYNLLVHALFMEGRMGEADDMIK----EMRKKGIIPD 347

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEM-----KKSQMSY--------------------- 235
              +NILI  + + G  + AF++  EM     + + ++Y                     
Sbjct: 348 AITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 407

Query: 236 --------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
                   P++I ++ +IDG C NG    A  L +EM  +  + PD +T+N L+ G CR 
Sbjct: 408 KILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCRE 466

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           GKV+ A+ +++ MK  G  P+  +Y TL++G+ + G +++A  V DEM +    P  + Y
Sbjct: 467 GKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTY 526

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
             LI C C+    D A ELLKEM  +G   D  T+  ++ G+
Sbjct: 527 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 106/192 (55%)

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           EGKL++A+E    M+    KP+ + Y T+I+ +   G ++ A  +L  M+ +G + D  T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +  ++ G+C+EG++EEA G+ +K+   G+  N  +Y  +++  C KG+LE+A      M+
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            +G +P  +T N L+  L   G   +A   +  + + G  P++ ++ +L+    R     
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 502 FAFELLDELVIK 513
            AF+L +E++ K
Sbjct: 366 RAFDLHNEMLSK 377


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 170/321 (52%), Gaps = 7/321 (2%)

Query: 195 HLRLKPNTC-----IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           H R+    C      + ++I   CK G      ++ +EM    +  PN+I YS+LI+GLC
Sbjct: 67  HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGIC-PNVIVYSSLINGLC 125

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           + G+ REA+ LF+EMVS+  I  + +TYN LI   CR G    A +    M   G  P+V
Sbjct: 126 RVGKLREAVNLFDEMVSQG-IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDV 184

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             +TTL++   K+GK+QEA ++F+ M      P+ + Y +L+N  C   ++D A+ L + 
Sbjct: 185 VTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEV 244

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M ERG K D++++N ++ G C  GK EEA+ +  K+ Y+ +  +  +Y I+L    Q G 
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +  A EL   M   G  P   T   LL  LCK G  E+A      L  + +KP    +++
Sbjct: 305 IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSI 364

Query: 490 LVELICRGRKLLFAFELLDEL 510
           L+  + + R+   A E+ DE+
Sbjct: 365 LIGGMFQARRWESAMEIFDEI 385



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 165/317 (52%), Gaps = 4/317 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN  +++ LI   C+ G L  A  +  EM  SQ    N+ITY++LI   C+ G ++EA  
Sbjct: 112 PNVIVYSSLINGLCRVGKLREAVNLFDEMV-SQGIKANVITYNSLIHASCRFGLWKEATR 170

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F +MV  + ILPD +T+  LID   + GKV  A KI E M   G  PN+  Y +L+NG 
Sbjct: 171 TFSQMVG-EGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C   ++  A  +F+ M    +K D I Y TLIN +C +G+ +EA+ L ++M+       I
Sbjct: 230 CLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSI 289

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+ I+L  L + G+I  A  +   +   G   +  +Y ++L+  C+ G +E+AI++ R 
Sbjct: 290 TTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRS 349

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +    + P     + L+  + +A   E A      +  +G  P   ++ +++  +C+  K
Sbjct: 350 LKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGK 409

Query: 500 LLFAFELLDELVIKESG 516
           LL A  L  ++  +ESG
Sbjct: 410 LLEAERLFVQM--EESG 424



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 159/314 (50%), Gaps = 2/314 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN    + L+K  C  G +  A E+  +M +S     +++ Y  LI+ L K  + R A+
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQ-GDILLYGYLINALRKTRQARRAV 64

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           EL   M+S +    +  TY ++ID  C+ G   +  K+   M N G  PNV  Y++L+NG
Sbjct: 65  ELHRRMLS-EICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+ GKL+EA  +FDEM +  +K + I Y +LI+  CR G   EA     +M   G   D
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VTF  ++  L ++GK++EA  + E +   G   N  +Y  +LN  C   +++ A+ L  
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           +M+ RG      + N L+   C +G  E+A      +      P   ++ +L++ + +  
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 499 KLLFAFELLDELVI 512
           ++  A EL + + I
Sbjct: 304 RIRTAKELFNNMQI 317



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 150/284 (52%), Gaps = 37/284 (13%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F  LI H  K+G ++ A+++ + M K Q   PN++TY++L++GLC + +   A+ 
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIK-QGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK------------------ 301
           LFE MV +  I  D ++YN LI+G+C  GK + A  +   M+                  
Sbjct: 241 LFEVMVERG-IKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 302 -------------NN----GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
                        NN    G +P++  YT L++G CK G ++EA +VF  +K+   KP  
Sbjct: 300 YQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSI 359

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             Y+ LI    +A R + A+E+  E+   G   +IVT+NI++ GLC+EGK+ EA  +  +
Sbjct: 360 RIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +   G   ++ S+  ++    Q+ +++KA+E L+ M  + F P+
Sbjct: 420 MEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 154/280 (55%), Gaps = 3/280 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PNL+T STL+ G+C  G+  +A+ELF++M ++     D L Y  LI+   +  +  RA +
Sbjct: 7   PNLVTVSTLVKGMCFEGKVMDALELFDKM-TRSGFQGDILLYGYLINALRKTRQARRAVE 65

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M +  C+ N F Y  +++  CK+G   +  ++F EM N  + P+ I Y++LIN  C
Sbjct: 66  LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R G++ EA+ L  EM  +G KA+++T+N ++   CR G  +EA     ++  +GI  +  
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG- 474
           ++  +++   +KG++++A ++  LM+ +G  P+  T N LL  LC      D A+ LF  
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQM-DHAVRLFEV 244

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +VE G K +  S+  L+   C   K   A  L  ++  +E
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 1/213 (0%)

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +G  PN+   +TL+ G C EGK+ +A E+FD+M     + D + Y  LIN   +  +   
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A+EL + M    C  +  T+ +++  LC++G   + L M  ++   GI  N   Y  ++N
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+ G+L +A+ L   M+ +G   +  T N L+   C+ G+ ++A      +V  G  P
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           +  ++  L++ + +  K+  A+++  EL+IK+ 
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIF-ELMIKQG 214



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 140/288 (48%), Gaps = 7/288 (2%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q A +IF  + +Q G   N  TY ++L+ L  + + +    +   M     K     +  
Sbjct: 201 QEAYKIFELMIKQ-GEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+  +      E  + +F K+       PS+   +  L  L ++ ++  A+    ++N  
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQ-YEELTPSITTYTILLKALYQNGRIRTAKEL--FNNMQ 316

Query: 196 L-RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           +    P+   + +L+   CK G +E A +V + +K  +   P++  YS LI G+ +  R+
Sbjct: 317 ICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK-PSIRIYSILIGGMFQARRW 375

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A+E+F+E+ +   ++P+ +TYN++I+G C+ GK+  A+++   M+ +GC  +  ++  
Sbjct: 376 ESAMEIFDEIPTVG-LVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNF 434

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           ++ GF +E ++Q+A E    M+     P+      L+N +    +  E
Sbjct: 435 IIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSE 482



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 5/255 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F  + E +G   +  +Y T+++      K E    + R+M YE        +  L+
Sbjct: 238 AVRLFEVMVE-RGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K            E+F+ +  I  + PSL   +  L+ L ++  ++ A +  + S + ++
Sbjct: 297 KALYQNGRIRTAKELFNNMQ-ICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFR-SLKSIK 354

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+  I++ILI    +    ESA E+  E+    +  PN++TY+ +I+GLCK G+  EA
Sbjct: 355 YKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGL-VPNIVTYNIMINGLCKEGKLLEA 413

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF +M  +     D +++N +I GF +  +V +A + ++ M+    +PN      L+N
Sbjct: 414 ERLFVQM-EESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVN 472

Query: 318 GFCKEGKLQEAKEVF 332
            +  + +  E    F
Sbjct: 473 LYAADAQSSELPNNF 487


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 192/349 (55%), Gaps = 2/349 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +PS     + +  L ++ +VD A + L+   +     P+    ++LI   CK   ++ A 
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYC-PDMATHSMLINELCKADKIQEAQ 429

Query: 223 EVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           E L+ M +K      +  +Y++L++ LCK  +  +A  +F  MVS+   +PD ++Y++LI
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DGFC+  ++ RA+K+ + M +  C PNV  Y   +NG  ++G++ +A+ V++EM      
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD I Y+TLI+ F  A + D+A EL + M  RGC+ + VT+N +L GLC+E K +EA  +
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 609

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K+   G   ++ +Y  +L   C  G++E+A+E+   M+ +G  P     N LL    +
Sbjct: 610 FRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFR 669

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           AG   +A      +V    KP++ S  ++++ + + ++L  A E+ + +
Sbjct: 670 AGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 211/424 (49%), Gaps = 13/424 (3%)

Query: 21  SSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIK--CEK-EPQC 77
           SSS P    L  +   + + D   +  + C++   R+   S G   S+I+  C+      
Sbjct: 336 SSSQPVYDMLIRLLIESGRID---KAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDS 392

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE--TCKFHEGIFLN 135
           AL +  T+  ++G+  + AT++ ++++L +  K +     L+ M  +  +       + +
Sbjct: 393 ALSLLETMI-KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNS 451

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+          +   +F  +       P + + S  ++   + +++  A+   K     
Sbjct: 452 LLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYK-QMID 510

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L   PN   +N  +    ++G +  A  V +EM  +  S P++ITYSTLI G     +  
Sbjct: 511 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS-PDVITYSTLIHGFSLARKHD 569

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A ELFE M+S+    P+A+TYN L+ G C+  K D A ++   M   GC+P+   YTTL
Sbjct: 570 QAHELFETMISRG-CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + GFC  GK+++A EVFDEM +    PD + Y  L+  F RAG+  EA +L + M  R C
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYD-GIYLNKASYRIVLNFSCQKGELEKAI 434
           K D V+ NI++ GL +  ++++A+ + E++  D G   +  +Y  ++   C +  L +A+
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 435 ELLR 438
           ++ +
Sbjct: 749 KVFK 752



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 133/553 (24%), Positives = 229/553 (41%), Gaps = 109/553 (19%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT---- 122
           ++IK  ++   AL  F  + + + F H+  TY  +LDKL R++  +    V  +M     
Sbjct: 102 AVIKHLRDGGEALTFFRWL-QARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGV 160

Query: 123 ---------------YETCKFHEGIFLNLM--KHFSNCS-LHERVLEM---------FHK 155
                          YE        F   M  K F   S L+++V E          F +
Sbjct: 161 VPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSR 220

Query: 156 IHPITREKPSLKAI----STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +     EK     +    +  +N +I+   ++ ++ F          KP+  I++ ++  
Sbjct: 221 VFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGC--KPDATIYSYMVLA 278

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE---LFEEMVSKD 268
           HCK   L+ AF++  EM     +  N + ++  + GLCK+G+  +A E     +E +S  
Sbjct: 279 HCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSS 338

Query: 269 Q------------------------------ILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           Q                              I P + T + +I   C+ G+VD A  ++E
Sbjct: 339 QPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLE 398

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK-------------NFLLK---- 341
            M   G  P++  ++ L+N  CK  K+QEA+E    M              N LL     
Sbjct: 399 TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCK 458

Query: 342 ---------------------PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
                                PD + Y+ LI+ FC+   +  A +L K+M +  C  ++ 
Sbjct: 459 AKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVT 518

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N  L GL R+G+I +A G+ E++   G   +  +Y  +++      + ++A EL   M
Sbjct: 519 TYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETM 578

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           + RG  P+  T N LL  LCK    ++A      +VE G  P+  ++  L+   C   K+
Sbjct: 579 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKI 638

Query: 501 LFAFELLDELVIK 513
             A E+ DE+V K
Sbjct: 639 EQAVEVFDEMVSK 651



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 12/324 (3%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           SL K +K  Q A  IF+T+  ++ F  +  +Y+ ++D   +  +    + + +QM    C
Sbjct: 455 SLCKAKKVHQ-AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 513

Query: 127 KFH---EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
             +      FLN +      +  + V E            P +   ST ++    + + D
Sbjct: 514 VPNVTTYNAFLNGLMRKGRIADAQGVYEEM----VAAGCSPDVITYSTLIHGFSLARKHD 569

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
            A    + +      +PN   +N L+   CK    + A E+ ++M +     P+ +TY+T
Sbjct: 570 QAHELFE-TMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD-PDRVTYTT 627

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           L+ G C  G+  +A+E+F+EMVSK    PD + YN L+ GF R GK   AK++ + M + 
Sbjct: 628 LLYGFCNVGKIEQAVEVFDEMVSKGHD-PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSR 686

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDE 362
            C P+  ++  +++G  K  +L +A EVF+ M ++    PD + Y +LI   C   R+ E
Sbjct: 687 QCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSE 746

Query: 363 ALELLKEMKERGCKADIVTFNIIL 386
           A+++ KE+       D   FN++L
Sbjct: 747 AMKVFKEIDRLKLSPDPHAFNVLL 770


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 155/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKIDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+++T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLCREG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRIAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+++ +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C+ G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 232 NELFDEMLVKGL-VPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CK+G L  A E    M     +
Sbjct: 290 YGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  CR G+  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN+  F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKIDDANELF---DEMLVKGLVPNSVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TLI GLCK G  ++A  L +EM S   + PD +TY  L
Sbjct: 266 AMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAHHLIDEM-SMKGLKPDKITYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 18  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIME-FMKNN---------------G 304
           L    L  GF R                  D  +K++E  MK                 G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E KI++A  + +++   G+  N  ++  +++  
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 ITYTTLIDGCCKDGDLDTAFE 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 39/230 (16%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N+ T+ T++D   +  + +    + +QM  ++                       
Sbjct: 241 KGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---------------------- 278

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P L   +T +  L +   +  A + +   +    LKP+   +  L
Sbjct: 279 --------------SPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK-GLKPDKITYTTL 323

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G L++AFE  K M +      +++ Y+ LI GLC+ G+  +A ++  EM+S  
Sbjct: 324 IDGCCKDGDLDTAFEHRKRMIQENTRLDDVV-YTALISGLCREGQSVDAEKMLREMLSVG 382

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + PDA TY ++I+ FC+ G V +  K+++ M+ +G  P+V  Y  LMNG
Sbjct: 383 -LKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 127/299 (42%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  +L  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAIFETKGTQRS--DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVP-- 106

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E +           Y  L+ GF            ++E
Sbjct: 107 ---------------FDTCRKVLEHLMK-------LKYFKLVWGF------------YEE 132

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G 
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T   
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 252

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK G  + A      ++     P+  ++  L+  +C+   L  A  L+DE+ +K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 311


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 230/489 (47%), Gaps = 79/489 (16%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY+ I++ L R    +  +A+LR+M     K +  ++  LM   +     E  +E    I
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA----KEGRVEESRMI 473

Query: 157 HPITREKPSLKAISTCLNLLI----ESNQVDLAQNFL----------------------- 189
               RE+  L  +  C N LI    ++ +++ A+ +L                       
Sbjct: 474 LERMREQGILPDV-FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYS 532

Query: 190 ---------KYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
                    +Y N+ L   + PN  I+  LI+ HCK G +  AF V + +  S+    ++
Sbjct: 533 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL-SRRVLQDV 591

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
            TYS LI GL +NG+  EA  +F E+  K  +LP+A TYN LI G C+ G VD+A +++E
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKG-LLPNAFTYNSLISGSCKQGNVDKASQLLE 650

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M   G NP++  Y  L++G CK G+++ AK +FD+++   L P+ + Y  +++ +C++ 
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710

Query: 359 RVDEALELLKEMKERG---------------CK-------------------ADIVTFNI 384
               A +LL+EM  RG               CK                   A  V+FN 
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNT 770

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+ GK++EA  +LE++       N  +Y  +++ +C+ G + +A  L   M  R 
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +P   T   LL      G   + +     +V  G +P+  ++ ++++  CR   ++ A 
Sbjct: 831 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890

Query: 505 ELLDELVIK 513
           +L DE+++K
Sbjct: 891 KLKDEILVK 899



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 179/350 (51%), Gaps = 35/350 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P++  +++LI+ HC+   +  AFE+L EMKK +++ P ++TYS +I+GLC+ G  +  
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA-PTVLTYSVIINGLCRCGNLQGT 435

Query: 258 IELFEEMV----------------------------------SKDQILPDALTYNVLIDG 283
             +  EMV                                   +  ILPD   YN LI G
Sbjct: 436 NAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIG 495

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+  +++ A+  +  M      PN   Y   ++G+ K G+++ A   F+EM +  + P+
Sbjct: 496 FCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              YT LI   C+ G V EA  + + +  R    D+ T+++++ GL R GK+ EA G+  
Sbjct: 556 VGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFS 615

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           +L   G+  N  +Y  +++ SC++G ++KA +LL  M  +G  P   T N L+  LCKAG
Sbjct: 616 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 675

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             E A      +   G  P   ++A +V+  C+ +    AF+LL+E++++
Sbjct: 676 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 215/445 (48%), Gaps = 22/445 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLAR----YKKFEAVDAVLRQMTYETCKFHEGIF 133
           ALEI   + E KG   ++ TY+ +++   R     + FE +D + ++    T   +  I 
Sbjct: 365 ALEIMQEMME-KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVII 423

Query: 134 LNLMK----HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
             L +      +N  L E V+            KP+    +T +    +  +V+ ++  L
Sbjct: 424 NGLCRCGNLQGTNAILREMVMNGL---------KPNAVVYTTLMTAHAKEGRVEESRMIL 474

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           +   +   L P+   +N LI   CK   +E A   L EM + ++  PN  TY   IDG  
Sbjct: 475 ERMREQGIL-PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR-PNAHTYGAFIDGYS 532

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K G    A   F EM+S   +LP+   Y  LI+G C+ G V  A  +  F+ +     +V
Sbjct: 533 KAGEMEIADRYFNEMLSCG-VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 591

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y+ L++G  + GK+ EA  +F E++   L P+   Y +LI+  C+ G VD+A +LL+E
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M  +G   DIVT+NI++ GLC+ G+IE A  + + +   G+  N  +Y  +++  C+   
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
              A +LL  ML RG  P     N +L   CK    E A      ++E GF   + S+  
Sbjct: 712 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNT 770

Query: 490 LVELICRGRKLLFAFELLDELVIKE 514
           L+E  C+  KL  A  LL+E++ K+
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQ 795



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 183/384 (47%), Gaps = 56/384 (14%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +PSL + ++ L  L++ N+V+L          H ++ P+   +  +I  HCK G ++ A 
Sbjct: 186 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAH-KVLPDVYTYTNMISAHCKVGNVKDAK 244

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            VL EM +           + L+D         EAIEL   MV K  ++PD  TY++LI+
Sbjct: 245 RVLLEMGEK----------ARLLD---------EAIELKRSMVDKG-LVPDLYTYDILIN 284

Query: 283 GFC-----------------------------------RGGKVDRAKKIMEFMKNNGCNP 307
           GFC                                   R G +++A +I + M   G   
Sbjct: 285 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA 344

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N+  + TL+NG CK GK+++A E+  EM    ++PD+  Y+ LI   CR   +  A ELL
Sbjct: 345 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 404

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EMK+R     ++T+++I+ GLCR G ++    +L ++  +G+  N   Y  ++    ++
Sbjct: 405 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKE 464

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G +E++  +L  M  +G LP     N L++  CKA   E+A   L  ++E   +P + ++
Sbjct: 465 GRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
              ++   +  ++  A    +E++
Sbjct: 525 GAFIDGYSKAGEMEIADRYFNEML 548



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 160/309 (51%), Gaps = 19/309 (6%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN+ IF++L+  + K G L  A  V    K  +   P+L++ ++L+  L K  +     +
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFR-PSLLSCNSLLGDLLKGNKVELFWK 210

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-----------------EFMKN 302
           +F+ M +  ++LPD  TY  +I   C+ G V  AK+++                   M +
Sbjct: 211 VFDGMCAH-KVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVD 269

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            G  P+++ Y  L+NGFC E + +EAK +  EM +  LKP+ I Y  LI+ F R G +++
Sbjct: 270 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A  +  EM   G +A+++ +N +L G+C+ GK+E+AL +++++   G+  +  +Y +++ 
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 389

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+   + +A ELL  M  R   P   T + ++  LC+ G  +     L  +V  G KP
Sbjct: 390 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 449

Query: 483 ESDSWALLV 491
            +  +  L+
Sbjct: 450 NAVVYTTLM 458



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 166/313 (53%), Gaps = 14/313 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +  ++ L ++ +++ A+N      +   L PN   +  ++  +CK     +AF+
Sbjct: 659 PDIVTYNILIDGLCKAGEIERAKNLFD-DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L+EM    +  P+   Y+ +++  CK  +F +A++LF+EM+ K       +++N LI+G
Sbjct: 718 LLEEMLLRGVP-PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEG 774

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+ GK+  A  ++E M      PN   YT+L++  CK G + EAK ++ EM+   + P 
Sbjct: 775 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 834

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              YT+L++ +   G + E   L +EM  +G + D +T+ +++   CREG + EA  + +
Sbjct: 835 AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 894

Query: 404 KLWYDGIYLNKASYRIVLNFSCQ--------KGELEKAIELLRLMLCRGFLPHYATSNEL 455
           ++   G+ + K+ +R+ L  +C          G +++A E+LR M+  G++ +  +  +L
Sbjct: 895 EILVKGMPM-KSGFRLGLP-TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDL 952

Query: 456 LVRLCKAGMAEDA 468
           +        +ED+
Sbjct: 953 VDGNQNGANSEDS 965



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 54/260 (20%)

Query: 305 CN--PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK--------------------- 341
           CN  PN   +  LM+ + K G L EA  VF   KNF  +                     
Sbjct: 148 CNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVEL 207

Query: 342 --------------PDTIGYTTLINCFCRAGRV-----------------DEALELLKEM 370
                         PD   YT +I+  C+ G V                 DEA+EL + M
Sbjct: 208 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSM 267

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            ++G   D+ T++I++ G C E +  EA  ML ++   G+     +Y  +++   ++G++
Sbjct: 268 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDI 327

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           E+A  +   M+  G   +    N LL  +CKAG  E A   +  ++E G +P+S +++LL
Sbjct: 328 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387

Query: 491 VELICRGRKLLFAFELLDEL 510
           +E  CRG+ +  AFELLDE+
Sbjct: 388 IEGHCRGQNMARAFELLDEM 407


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 166/295 (56%), Gaps = 3/295 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN  ++N+++   CK G +  A  +  EM    +   ++ TY++LI G C  G+F+ A
Sbjct: 192 VRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICI-DVFTYNSLIHGFCGAGQFQGA 250

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L  EMV K+ + PD  T+N+L+D  C+ G V  A+ +   M   G  P+V +   LMN
Sbjct: 251 VRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMN 310

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C  G + EAKEVFD M      P+ I Y+TLIN +C+   VDEAL LL EM +R    
Sbjct: 311 GWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVP 370

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT+N +L GL + G++     ++E +   G   +  +Y ++L+   ++  L+KA+ L 
Sbjct: 371 DTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALF 430

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLV 491
           + ++  G  P+  T N L+  LCK G  + AA  +F L+ + G +P   ++ +++
Sbjct: 431 QHIVDTGISPNIRTYNILIDGLCKGGRMK-AAKEIFQLLSVKGCRPNIRTYNIMI 484



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 163/311 (52%), Gaps = 5/311 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI   CK G    A E+L++M+K  +  PNLI Y+ ++DGLCK G   EA  L  EM
Sbjct: 164 YGTLINGLCKMGKTRDAIELLRKMEKGGVR-PNLIMYNMVVDGLCKEGLVTEACGLCSEM 222

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEG 323
           V K  I  D  TYN LI GFC  G+   A +++ E +      P+V+ +  L++  CK G
Sbjct: 223 VGKG-ICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLG 281

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            + EA+ VF  M    L+PD +    L+N +C  G + EA E+   M ERG   ++++++
Sbjct: 282 MVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYS 341

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G C+   ++EAL +L ++    +  +  +Y  +L+   + G +    +L+  M   
Sbjct: 342 TLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRAS 401

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLF 502
           G  P   T N LL    K     D A+ALF  +V+ G  P   ++ +L++ +C+G ++  
Sbjct: 402 GQAPDLITYNVLLDDYLKR-ECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKA 460

Query: 503 AFELLDELVIK 513
           A E+   L +K
Sbjct: 461 AKEIFQLLSVK 471



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 186/368 (50%), Gaps = 10/368 (2%)

Query: 147 ERVLEMFHK---IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  +  FH+   +HP     PS+ +++  L+ ++++       +   + +     KP+  
Sbjct: 37  DDAVSTFHRMLHLHP----PPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLV 92

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
             +I I      G +  AF V+ ++ K      +  T +TL+ GLC  GR  EA+ L++ 
Sbjct: 93  TLSIFINSLTHLGQMGLAFSVMAKIVKRGFGV-DPFTLTTLMKGLCLKGRTFEALNLYDH 151

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
            VSK     D + Y  LI+G C+ GK   A +++  M+  G  PN+  Y  +++G CKEG
Sbjct: 152 AVSKGFSF-DEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEG 210

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERGCKADIVTF 382
            + EA  +  EM    +  D   Y +LI+ FC AG+   A+ LL EM  +   + D+ TF
Sbjct: 211 LVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTF 270

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           NI++  LC+ G + EA  +   +   G+  +  S   ++N  C +G + +A E+   M+ 
Sbjct: 271 NILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVE 330

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           RG LP+  + + L+   CK  M ++A   L  + +    P++ ++  L++ + +  ++L+
Sbjct: 331 RGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLY 390

Query: 503 AFELLDEL 510
            ++L++ +
Sbjct: 391 EWDLVEAM 398



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 143/277 (51%), Gaps = 1/277 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++++ + L+  + K   +   + L   + SK    P  +T ++ I+     G++  A  
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +M  +   G   + F  TTLM G C +G+  EA  ++D   +     D + Y TLIN  C
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+  +A+ELL++M++ G + +++ +N+++ GLC+EG + EA G+  ++   GI ++  
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCR-GFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           +Y  +++  C  G+ + A+ LL  M+ +    P   T N L+  LCK GM  +A      
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +++ G +P+  S   L+   C    +  A E+ D +V
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMV 329



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 83/174 (47%)

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           KP  +  +  IN     G++  A  ++ ++ +RG   D  T   ++ GLC +G+  EAL 
Sbjct: 88  KPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALN 147

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           + +     G   ++  Y  ++N  C+ G+   AIELLR M   G  P+    N ++  LC
Sbjct: 148 LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLC 207

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           K G+  +A      +V  G   +  ++  L+   C   +   A  LL+E+V+KE
Sbjct: 208 KEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKE 261



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 48/246 (19%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F+ + E +G   N  +Y+T+++    Y K + VD  LR +T               
Sbjct: 321 AKEVFDRMVE-RGKLPNVISYSTLING---YCKVKMVDEALRLLT--------------- 361

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV----DLAQNFLKYSN 193
                  +H+R L             P     +  L+ L +S +V    DL +  ++ S 
Sbjct: 362 ------EMHQRNLV------------PDTVTYNCLLDGLSKSGRVLYEWDLVEA-MRASG 402

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q     P+   +N+L+  + KR  L+ A  + + +  + +S PN+ TY+ LIDGLCK GR
Sbjct: 403 Q----APDLITYNVLLDDYLKRECLDKALALFQHIVDTGIS-PNIRTYNILIDGLCKGGR 457

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            + A E+F+ ++S     P+  TYN++I+G  R G +D A+ ++  M ++G  PN   + 
Sbjct: 458 MKAAKEIFQ-LLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFD 516

Query: 314 TLMNGF 319
            L+   
Sbjct: 517 PLVRAL 522


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 223/453 (49%), Gaps = 20/453 (4%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C K P  AL  F  ++ + G + +  T+ T+L  L    +         QM   TC+ + 
Sbjct: 127 CSKLP-FALSTFGKIT-KLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNV 184

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNF 188
             F  LM          R++E    +  +  +  +P+     T ++ + +      A N 
Sbjct: 185 VTFTTLMNGLCR---EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+   +   + PN  I++ +I   CK G    A  +  EM++  + +P+L TY+++I G 
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGF 300

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C +GR+ +A +L +EM+ + +I PD +TYN LI+ F + GK   A+++ + M   G  PN
Sbjct: 301 CSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
              Y+++++GFCK+ +L  A+ +F  M      P+ I + TLI+ +C A R+D+ +ELL 
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM E G  AD  T+N ++ G    G +  AL +L+++   G+  +  +   +L+  C  G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 429 ELEKAIELLRLML-----------CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
           +L+ A+E+ ++M              G  P   T N L+  L   G   +A      +  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P++ +++ +++ +C+  +L  A ++ D +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 220/461 (47%), Gaps = 53/461 (11%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  ++  + R ++ + V ++ ++M  +  +     F  L+K F +CS     L  F KI 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    P +   +T L+ L   ++V  A +F  +       +PN   F  L+   C+ G 
Sbjct: 142 KLGLH-PDVVTFTTLLHGLCVEDRVSEALDFF-HQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDG------------------------------ 247
           +  A  +L  M +  +  P  ITY T++DG                              
Sbjct: 200 IVEAVALLDRMMEDGLQ-PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258

Query: 248 ------LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                 LCK+GR  +A  LF EM  K  I PD  TYN +I GFC  G+   A+++++ M 
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
               +P+V  Y  L+N F KEGK  EA+E++DEM    + P+TI Y+++I+ FC+  R+D
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  +   M  +GC  +++TFN ++ G C   +I++ + +L ++   G+  +  +Y  ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM--- 478
           +     G+L  A++LL+ M+  G  P   T + LL  LC  G  +D A+ +F +++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD-ALEMFKVMQKSKK 496

Query: 479 ---------GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                    G +P+  ++ +L+  +    K L A EL +E+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 177/359 (49%), Gaps = 48/359 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY++++D   +  + +A + +   M  + C                      
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--------------------- 392

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P+L   +T ++    + ++D     L +      L  +T  +N L
Sbjct: 393 ---------------PNLITFNTLIDGYCGAKRIDDGMELL-HEMTETGLVADTTTYNTL 436

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I      G L +A ++L+EM  S +  P+++T  TL+DGLC NG+ ++A+E+F+ M    
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 269 QIL----------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           + L          PD  TYN+LI G    GK   A+++ E M + G  P+   Y+++++G
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ +L EA ++FD M +    P+ + +TTLIN +C+AGRVD+ LEL  EM  RG  A+
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +T+  ++ G  + G I  AL + +++   G+Y +  + R +L     K EL++A+ +L
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 167/317 (52%), Gaps = 3/317 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P+   F  L+   C    +  A +   +M ++    PN++T++TL++GLC+ GR  
Sbjct: 143 LGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT-CRPNVVTFTTLMNGLCREGRIV 201

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + M+ +D + P  +TY  ++DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 202 EAVALLDRMM-EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++  CK+G+  +A+ +F EM+   + PD   Y ++I  FC +GR  +A +LL+EM ER 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+VT+N ++    +EGK  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +  LM  +G  P+  T N L+   C A   +D    L  + E G   ++ ++  L+   
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 495 CRGRKLLFAFELLDELV 511
                L  A +LL E++
Sbjct: 441 YLVGDLNAALDLLQEMI 457



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 158/307 (51%), Gaps = 14/307 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    S+ ++   + N++D A++   Y        PN   FN LI  +C    ++   E
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF-YLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM ++ +   +  TY+TLI G    G    A++L +EM+S   + PD +T + L+DG
Sbjct: 417 LLHEMTETGL-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDG 474

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L++G   EGK  EA+E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +    ++VTF  ++ G C+ 
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G++++ L +  ++   GI  N  +Y  ++    + G +  A+++ + M+  G  P   T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 453 NELLVRL 459
             +L  L
Sbjct: 655 RNMLTGL 661



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 205/447 (45%), Gaps = 37/447 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  +  +  + +   AL +   + E      N   Y+ I+D L +  +      +  
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 120 QMTYETCKFHEGIFLNLMKHFS---------NCSLHERVL-EMFHKIHPITREKPSLKAI 169
           +M        +GIF +L  + S           S  E++L EM  +     +  P +   
Sbjct: 280 EMQ------EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-----KISPDVVTY 328

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           +  +N  ++  +   A+    Y     R + PNT  ++ +I   CK+  L++A  +   M
Sbjct: 329 NALINAFVKEGKFFEAEEL--YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
                S PNLIT++TLIDG C   R  + +EL  EM ++  ++ D  TYN LI GF   G
Sbjct: 387 ATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEM-TETGLVADTTTYNTLIHGFYLVG 444

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL--------- 339
            ++ A  +++ M ++G  P++    TL++G C  GKL++A E+F  M+            
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 340 --LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             ++PD   Y  LI+     G+  EA EL +EM  RG   D +T++ ++ GLC++ +++E
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  M + +       N  ++  ++N  C+ G ++  +EL   M  RG + +  T   L+ 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPES 484
              K G    A      ++  G  P++
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 37/294 (12%)

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +AI+LF +M+ + + LP  + +  L+    R  + D    + + M+      +++++ 
Sbjct: 60  LEDAIDLFSDML-RSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+  FC   KL  A   F ++    L PD + +TTL++  C   RV EAL+   +M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            C+ ++VTF  ++ GLCREG+I EA+ +L+++  DG+   + +Y  +++  C+KG+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 434 IELLRLM-------------------LC-----------------RGFLPHYATSNELLV 457
           + LLR M                   LC                 +G  P   T N ++V
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             C +G   DA   L  ++E    P+  ++  L+    +  K   A EL DE++
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 94/196 (47%)

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L +GF +   L++A ++F +M      P  + +  L+    R  R D  + L ++M+ + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + DI +FNI++   C   K+  AL    K+   G++ +  ++  +L+  C +  + +A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +    M      P+  T   L+  LC+ G   +A   L  ++E G +P   ++  +V+ +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 495 CRGRKLLFAFELLDEL 510
           C+    + A  LL ++
Sbjct: 230 CKKGDTVSALNLLRKM 245


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 167/287 (58%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMID-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 149/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLR-PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M +NG  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 159/317 (50%), Gaps = 19/317 (5%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +++P       ++     +G+  + F  + E K +Q S  ++  +S LI    ++G  R+
Sbjct: 27  QMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRD 84

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPN 308
           AIE +         L     + V  D  CR       K+   K +  F + +   G   +
Sbjct: 85  AIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYPAS 135

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           ++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L  
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            M+  G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNG 255

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  ++ 
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 489 LLVELICRGRKLLFAFE 505
            L++  C+   L  AFE
Sbjct: 316 TLIDGNCKEGDLETAFE 332


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 228/480 (47%), Gaps = 54/480 (11%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P  A   F    +QK + H    Y +++D L+    F+ V  +  +       F E  F
Sbjct: 134 KPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGE-------FKEKGF 186

Query: 134 L-------NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
           L       +L++ F    + E +L ++ ++     E PSL   +  LN L+ S  ++ A+
Sbjct: 187 LMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIE-PSLYTFNFLLNGLVNSMFIESAE 245

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
              +   +  ++ P+   +N +IK +CK G  + A E   +M+K  +  P+ ITY TLI 
Sbjct: 246 RVFEVM-ECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLE-PDKITYLTLIQ 303

Query: 247 -----------------------------------GLCKNGRFREAIELFEEMVSKDQIL 271
                                              GLCK+GR  E   +FE M +K    
Sbjct: 304 ACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENM-NKKGCK 362

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
            +   Y  LID + + G V+ A  + E MK  G  P+   Y  ++NG CK G+L EA E 
Sbjct: 363 ANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEY 422

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F+  K+  +  + + Y++LI+   +AGRVDEA +  +EM ERGC  D   +N ++  L +
Sbjct: 423 FEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAK 482

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            GK+EEAL + +++  +G      +Y I+++   ++   E+A++L  LM+ +G  P  A+
Sbjct: 483 SGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTAS 542

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L V LC +G    A   L  L  MG  PE+ ++  ++ ++C+  +   A +L D +V
Sbjct: 543 FRALSVGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIV 601



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 42/347 (12%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL-RLKPNTCIFNILIKHHCKR 215
           +P  +  P +  I   L+       V++  N   Y ++ L +L PN   F  ++K    R
Sbjct: 80  NPQPQPSPWVNQILKLLD-----GSVNMESNLDSYCSKFLIKLSPNFVAF--VLKSDAIR 132

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL----------CKNGRFRE--------- 256
           G  + AF       K +     +  Y +LID L          C  G F+E         
Sbjct: 133 GKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFA 192

Query: 257 ---------AIELFEEMV------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                    A+ + EE++       +  I P   T+N L++G      ++ A+++ E M+
Sbjct: 193 ANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVME 252

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                P+V +Y T++ G+CK G  ++A E F +M+   L+PD I Y TLI      G  D
Sbjct: 253 CGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFD 312

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
             L L +EM+ERG +     +++++GGLC++G+  E   + E +   G   N A Y  ++
Sbjct: 313 SCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALI 372

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +   + G + +AI L   M   GF P   T   ++  LCK+G  ++A
Sbjct: 373 DAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEA 419



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 41/264 (15%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +P+   + +++   CK G L+ A E  +  K ++++  N + YS+LIDGL K GR  EA
Sbjct: 396 FEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAV-NAMFYSSLIDGLGKAGRVDEA 454

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            + FEEMV +     D+  YN LID   + GK++ A  + + M+  GC+  V+ YT L++
Sbjct: 455 EKFFEEMVERG-CPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILIS 513

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL--------------------------- 350
           G  KE + +EA +++D M +  + P T  +  L                           
Sbjct: 514 GLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIP 573

Query: 351 -------INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
                  IN  C+AGR ++A +L   + +RG +       I++  L + G  + A+ ++ 
Sbjct: 574 ETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMH 633

Query: 404 K---LWYD--GIYLNKASYRIVLN 422
               + YD  G    +  +R++++
Sbjct: 634 SKIGIGYDRMGSIKRRVKFRVLVD 657


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/279 (35%), Positives = 160/279 (57%), Gaps = 3/279 (1%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           ++I+YS  I+GLCK G+  EA+E+F EM  K    PD+ TYN+LI+G C+  +++    +
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSA-PDSFTYNILINGLCKDAQLEMGVSL 148

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           M+ M+  G +P V  YTTL++GFC  G++  A ++ DEM++  + P+T+ YT LI   C 
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208

Query: 357 AGRVDEALELLKEMKERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
            G V+ A+ +LKEMK RG  C  ++VT+  ++ GLC++G  E  +  L+++   G + N 
Sbjct: 209 CGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN 268

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           A+Y  +++  CQKG   +A  LL  M+  G        N L+  LCK G  + A      
Sbjct: 269 ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +VE G  P+  ++  L++ +C    L  A  L+ E+  K
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAK 367



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 164/307 (53%), Gaps = 10/307 (3%)

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK+G +  A E+ +EM++ + S P+  TY+ LI+GLCK+ +    + L +EM ++ 
Sbjct: 98  INGLCKKGQIAEAMEIFREMEE-KGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARG 156

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              P  +TY  LI GFC  G+VD A  I++ M++ G  PN   YT L+ G C  G+++ A
Sbjct: 157 -FSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERA 215

Query: 329 KEVFDEMKNFLLK-----PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
             V  EMK   L+     P+ + YT LI+  C+ G  +  +E L EM   GC  +  T+ 
Sbjct: 216 ILVLKEMK---LRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYT 272

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLC++G   EA  +L ++   G  L+   Y  +++  C+ GEL+ A E+  LM+ +
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEK 332

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T   L+  LC AG+ ++A   +  +   G  P S ++  L+    +  +   A
Sbjct: 333 GVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHA 392

Query: 504 FELLDEL 510
            +L++E+
Sbjct: 393 LQLVNEM 399



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 155/293 (52%), Gaps = 4/293 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P++  +NILI   CK   LE    ++ EM+    S P ++TY+TLI G C  GR   A++
Sbjct: 124 PDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFS-PTVVTYTTLIHGFCTAGRVDAAMD 182

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK--NNGCNPNVFNYTTLMN 317
           + +EM  +  I P+ +TY  LI G C  G+V+RA  +++ MK   N C PNV  YT L++
Sbjct: 183 ILDEMEHRG-ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIH 241

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C++G  +   E  DEM      P+   YT LI+  C+ G   EA  LL EM   GC+ 
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCEL 301

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V +N ++ GLC+ G+++ A  M   +   G+  +  +Y  ++   C  G L++A+ L+
Sbjct: 302 DVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLM 361

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           + M  +G +P+  T   L+    +A   + A   +  +   G  P  D + +L
Sbjct: 362 QEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 147/276 (53%), Gaps = 3/276 (1%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           +N L +  Q+++  + +    Q     P    +  LI   C  G +++A ++L EM+   
Sbjct: 133 INGLCKDAQLEMGVSLMD-EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEM-VSKDQILPDALTYNVLIDGFCRGGKVD 291
           ++ PN +TY+ LI GLC  G    AI + +EM +  ++  P+ +TY  LI G C+ G  +
Sbjct: 192 IT-PNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFE 250

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
              + ++ M  +GC PN   YT L++G C++G   EA  + +EM     + D + Y +LI
Sbjct: 251 MGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLI 310

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +  C+ G +D A E+   M E+G   D+ T+  ++ GLC  G ++EALG+++++   GI 
Sbjct: 311 DGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIV 370

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            N  +Y  ++N   Q    + A++L+  M   G +P
Sbjct: 371 PNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMP 406



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 141/246 (57%), Gaps = 4/246 (1%)

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D ++Y+  I+G C+ G++  A +I   M+  G  P+ F Y  L+NG CK+ +L+    + 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           DEM+     P  + YTTLI+ FC AGRVD A+++L EM+ RG   + VT+  ++ GLC  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 393 GKIEEALGMLEKLWYDG--IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           G++E A+ +L+++   G     N  +Y  +++  CQKG  E  +E L  M+  G  P+ A
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T   L+  LC+ G   +AA+ L  +V +G + +   +  L++ +C+  +L FA E+  ++
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREM--QI 327

Query: 511 VIKESG 516
           ++ E G
Sbjct: 328 LMVEKG 333



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 138/259 (53%), Gaps = 3/259 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T ++    + +VD A + L    +H  + PNT  +  LI+  C  G +E A  
Sbjct: 159 PTVVTYTTLIHGFCTAGRVDAAMDILD-EMEHRGITPNTVTYTALIQGLCDCGEVERAIL 217

Query: 224 VLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           VLKEMK +     PN++TY+ LI GLC+ G F   +E  +EM+      P+  TY  LI 
Sbjct: 218 VLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG-CFPNNATYTALIH 276

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ G    A  ++  M   GC  +V  Y +L++G CK G+L  A+E+   M    + P
Sbjct: 277 GLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAP 336

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   YT+LI   C AG +DEAL L++EM+ +G   + VT+  ++ G  +  + + AL ++
Sbjct: 337 DVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLV 396

Query: 403 EKLWYDGIYLNKASYRIVL 421
            ++  +G+      Y+I+ 
Sbjct: 397 NEMKSNGLMPAGDIYKILF 415



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 37/288 (12%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + +GF+    TY T++       + +A   +L +M +     +   +  L++   +C   
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           ER + +  ++         L+    C                           PN   + 
Sbjct: 213 ERAILVLKEMK--------LRGNECC---------------------------PNVVTYT 237

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   C++G  E   E L EM  S   +PN  TY+ LI GLC+ G F EA  L  EMV+
Sbjct: 238 QLIHGLCQKGLFEMGMEFLDEMIISG-CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
               L D + YN LIDG C+ G++D A+++   M   G  P+VF YT+L+ G C  G L 
Sbjct: 297 IGCEL-DVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLD 355

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           EA  +  EM+   + P+++ YTTLIN F +A R D AL+L+ EMK  G
Sbjct: 356 EALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNG 403



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 118/211 (55%), Gaps = 2/211 (0%)

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           N  + +V +Y+  +NG CK+G++ EA E+F EM+     PD+  Y  LIN  C+  +++ 
Sbjct: 85  NSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEM 144

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            + L+ EM+ RG    +VT+  ++ G C  G+++ A+ +L+++ + GI  N  +Y  ++ 
Sbjct: 145 GVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQ 204

Query: 423 FSCQKGELEKAIELLRLMLCRGF--LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             C  GE+E+AI +L+ M  RG    P+  T  +L+  LC+ G+ E     L  ++  G 
Sbjct: 205 GLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGC 264

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELV 511
            P + ++  L+  +C+    L A  LL+E+V
Sbjct: 265 FPNNATYTALIHGLCQKGSFLEAAVLLNEMV 295


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 230/489 (47%), Gaps = 79/489 (16%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY+ I++ L R    +  +A+LR+M     K +  ++  LM   +     E  +E    I
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA----KEGRVEESRMI 482

Query: 157 HPITREKPSLKAISTCLNLLI----ESNQVDLAQNFL----------------------- 189
               RE+  L  +  C N LI    ++ +++ A+ +L                       
Sbjct: 483 LERMREQGILPDV-FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYS 541

Query: 190 ---------KYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
                    +Y N+ L   + PN  I+  LI+ HCK G +  AF V + +  S+    ++
Sbjct: 542 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL-SRRVLQDV 600

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
            TYS LI GL +NG+  EA  +F E+  K  +LP+A TYN LI G C+ G VD+A +++E
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKG-LLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M   G NP++  Y  L++G CK G+++ AK +FD+++   L P+ + Y  +++ +C++ 
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719

Query: 359 RVDEALELLKEMKERG---------------CK-------------------ADIVTFNI 384
               A +LL+EM  RG               CK                   A  V+FN 
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNT 779

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+ GK++EA  +LE++       N  +Y  +++ +C+ G + +A  L   M  R 
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 839

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +P   T   LL      G   + +     +V  G +P+  ++ ++++  CR   ++ A 
Sbjct: 840 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 899

Query: 505 ELLDELVIK 513
           +L DE+++K
Sbjct: 900 KLKDEILVK 908



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 210/427 (49%), Gaps = 10/427 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G      TY  ++D   R    E    +  +M     + +  I+  L+         E+ 
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 374

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESN--QVDLAQNF-LKYSNQHLRLKPNTCIFN 206
           LE+  ++      +  ++  S   +LLIE +    ++A+ F L    +  +L P    ++
Sbjct: 375 LEIMQEMM-----EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 429

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ++I   C+ G L+    +L+EM  + +  PN + Y+TL+    K GR  E+  + E M  
Sbjct: 430 VIINGLCRCGNLQGTNAILREMVMNGLK-PNAVVYTTLMTAHAKEGRVEESRMILERM-R 487

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  ILPD   YN LI GFC+  +++ A+  +  M      PN   Y   ++G+ K G+++
Sbjct: 488 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 547

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A   F+EM +  + P+   YT LI   C+ G V EA  + + +  R    D+ T+++++
Sbjct: 548 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 607

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL R GK+ EA G+  +L   G+  N  +Y  +++ SC++G ++KA +LL  M  +G  
Sbjct: 608 HGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGIN 667

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T N L+  LCKAG  E A      +   G  P   ++A +V+  C+ +    AF+L
Sbjct: 668 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 727

Query: 507 LDELVIK 513
           L+E++++
Sbjct: 728 LEEMLLR 734



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 193/384 (50%), Gaps = 38/384 (9%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +PSL + ++ L  L++ N+V+L          H ++ P+   +  +I  HCK G ++ A 
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAH-KVLPDVYTYTNMISAHCKVGNVKDAK 235

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            VL EM +   S PNL+TY+ +I GLC+     EAIEL   MV K  ++PD  TY++LI+
Sbjct: 236 RVLLEMGEKGCS-PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG-LVPDLYTYDILIN 293

Query: 283 GFC-----------------------------------RGGKVDRAKKIMEFMKNNGCNP 307
           GFC                                   R G +++A +I + M   G   
Sbjct: 294 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA 353

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N+  + TL+NG CK GK+++A E+  EM    ++PD+  Y+ LI   CR   +  A ELL
Sbjct: 354 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 413

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EMK+R     ++T+++I+ GLCR G ++    +L ++  +G+  N   Y  ++    ++
Sbjct: 414 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKE 473

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G +E++  +L  M  +G LP     N L++  CKA   E+A   L  ++E   +P + ++
Sbjct: 474 GRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 533

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
              ++   +  ++  A    +E++
Sbjct: 534 GAFIDGYSKAGEMEIADRYFNEML 557



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 214/460 (46%), Gaps = 40/460 (8%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N   + T+L+ + +  K E    ++++M  +  +     +  L++         R 
Sbjct: 350 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 409

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E+  ++    +  P++   S  +N L     +      L+    +  LKPN  ++  L+
Sbjct: 410 FELLDEMKK-RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN-GLKPNAVVYTTLM 467

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
             H K G +E +  +L+ M++ Q   P++  Y++LI G CK  R  EA     EM+ + +
Sbjct: 468 TAHAKEGRVEESRMILERMRE-QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER-R 525

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG------ 323
           + P+A TY   IDG+ + G+++ A +    M + G  PNV  YT L+ G CKEG      
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 585

Query: 324 -----------------------------KLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
                                        K+ EA  +F E++   L P+   Y +LI+  
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G VD+A +LL+EM  +G   DIVT+NI++ GLC+ G+IE A  + + +   G+  N 
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 705

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +++  C+      A +LL  ML RG  P     N +L   CK    E A      
Sbjct: 706 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 765

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           ++E GF   + S+  L+E  C+  KL  A  LL+E++ K+
Sbjct: 766 MLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 159/311 (51%), Gaps = 37/311 (11%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN+ IF++L+  + K G L  A  V    K  +   P+L++ ++L+  L K  +     +
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFR-PSLLSCNSLLGDLLKGNKVELFWK 201

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+ M +  ++LPD  TY  +I   C+ G V  AK+++  M   GC+PN+  Y  ++ G 
Sbjct: 202 VFDGMCAH-KVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+   L EA E+   M +  L PD   Y  LIN FC   R  EA  +L EM + G K + 
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+N ++ G  R+G IE+A  + +++   GI  N   +  +LN  C+ G++EKA+E+++ 
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+                                   E G +P+S +++LL+E  CRG+ 
Sbjct: 381 MM-----------------------------------EKGVEPDSQTYSLLIEGHCRGQN 405

Query: 500 LLFAFELLDEL 510
           +  AFELLDE+
Sbjct: 406 MARAFELLDEM 416



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 159/298 (53%), Gaps = 2/298 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           ++   +P+    N L+    K   +E  ++V   M   ++  P++ TY+ +I   CK G 
Sbjct: 172 KNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKV-LPDVYTYTNMISAHCKVGN 230

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            ++A  +  EM  K    P+ +TYNV+I G CR   +D A ++   M + G  P+++ Y 
Sbjct: 231 VKDAKRVLLEMGEKG-CSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYD 289

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+NGFC E + +EAK +  EM +  LKP+ I Y  LI+ F R G +++A  +  EM   
Sbjct: 290 ILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC 349

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G +A+++ +N +L G+C+ GK+E+AL +++++   G+  +  +Y +++   C+   + +A
Sbjct: 350 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 409

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            ELL  M  R   P   T + ++  LC+ G  +     L  +V  G KP +  +  L+
Sbjct: 410 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 467



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 209/432 (48%), Gaps = 25/432 (5%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY   +D  ++  + E  D    +M       + GI+  L++   +C     V E F
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE--GHCK-EGNVTEAF 585

Query: 154 HKIHPITREKPSLKAISTCLNLLIE--SNQVDLAQNFLKYSN-QHLRLKPNTCIFNILIK 210
                I   +  L+ + T  ++LI   S    + + F  +S  Q   L PN   +N LI 
Sbjct: 586 SVFRFILSRR-VLQDVQT-YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             CK+G ++ A ++L+EM    ++ P+++TY+ LIDGLCK G    A  LF+++  +  +
Sbjct: 644 GSCKQGNVDKASQLLEEMCIKGIN-PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG-L 701

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            P+ +TY  ++DG+C+      A +++E M   G  P+ F Y  ++N  CKE K ++A +
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 331 VFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           +F EM  K F     T+ + TLI  +C++G++ EA  LL+EM E+    + VT+  ++  
Sbjct: 762 LFQEMLEKGF---ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDH 818

Query: 389 LCREGKIEEALGMLEKLWYD----GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            C+ G + EA    ++LW +     +     +Y  +L+     G + +   L   M+ +G
Sbjct: 819 NCKAGMMGEA----KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T   ++   C+ G   +A      ++  G      ++  L++ +C+  +     
Sbjct: 875 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVL 934

Query: 505 ELLDELVIKESG 516
           +LL+E  I ESG
Sbjct: 935 KLLNE--IGESG 944



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 173/329 (52%), Gaps = 4/329 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +  ++ L ++ +++ A+N      +   L PN   +  ++  +CK     +AF+
Sbjct: 668 PDIVTYNILIDGLCKAGEIERAKNLFD-DIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L+EM    +  P+   Y+ +++  CK  +F +A++LF+EM+ K       +++N LI+G
Sbjct: 727 LLEEMLLRGVP-PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEG 783

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+ GK+  A  ++E M      PN   YT+L++  CK G + EAK ++ EM+   + P 
Sbjct: 784 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 843

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              YT+L++ +   G + E   L +EM  +G + D +T+ +++   CREG + EA  + +
Sbjct: 844 AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 903

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+ ++ A+Y  ++   C+K E  + ++LL  +   GF     T + +      AG
Sbjct: 904 EILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAG 963

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVE 492
             ++AA  L  +V+ G+   + S   LV+
Sbjct: 964 NMDEAAEVLRSMVKFGWVSNTTSLGDLVD 992



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 120/240 (50%), Gaps = 2/240 (0%)

Query: 201  NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
            +T  FN LI+ +CK G L+ A  +L+EM + Q   PN +TY++LID  CK G   EA  L
Sbjct: 773  STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF-IPNHVTYTSLIDHNCKAGMMGEAKRL 831

Query: 261  FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            + EM  ++ ++P A TY  L+ G+   G +     + E M   G  P+   Y  +++ +C
Sbjct: 832  WLEMQERN-VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 890

Query: 321  KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +EG + EA ++ DE+    +      Y  LI   C+     E L+LL E+ E G +  + 
Sbjct: 891  REGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLP 950

Query: 381  TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            T ++I  G    G ++EA  +L  +   G   N  S   +++ +      E +  LL+ M
Sbjct: 951  TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 2/209 (0%)

Query: 305 CN--PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           CN  PN   +  LM+ + K G L EA  VF   KNF  +P  +   +L+    +  +V+ 
Sbjct: 139 CNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVEL 198

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
             ++   M       D+ T+  ++   C+ G +++A  +L ++   G   N  +Y +++ 
Sbjct: 199 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIG 258

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+   L++AIEL R M+ +G +P   T + L+   C    + +A + L  ++++G KP
Sbjct: 259 GLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 318

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELV 511
           E  ++  L++   R   +  AF + DE+V
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMV 347


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 193/350 (55%), Gaps = 9/350 (2%)

Query: 164 PSLKAISTCLNLLIESNQV-DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           PS+ +++  L  L+ + +  D  Q F +     LR  P+  ++   I+   K G L+ A 
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLR--PDQFMYGKAIQAAVKLGDLKRAI 202

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E++  MK+  +S P +  Y+ +I GLCK  R ++A +LF+EM+ + ++ P+ +TYN LID
Sbjct: 203 ELMTCMKRGGVS-PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR-RVAPNRITYNTLID 260

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+C+ G+++ A  I E MK     P +  + +L+NG C+   ++EA+ V +EM+ +   P
Sbjct: 261 GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVP 320

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   YTTL +   + G VD ++ L +E   +G +    T +I+L  LC+EG +E+A  +L
Sbjct: 321 DRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVL 380

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +K   +G+      +  ++N  CQ G++ KA   +  M   G  P++ T N L+ + C+ 
Sbjct: 381 KKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM 440

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF--AFELLDEL 510
              E+A   +  +VE G  P  +++  L++    GR  LF   F++L+E+
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLID--GYGRSCLFDRCFQILEEM 488



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 191/402 (47%), Gaps = 8/402 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N+ TY +++ K    K  E  +  +++M  +    +   +  L+  +    L 
Sbjct: 419 EAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLF 478

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +R  ++  ++      KP++ +    +N L +   +  A+  L     H  + PN  I+N
Sbjct: 479 DRCFQILEEMEK-KGLKPNVISYGCLINCLCKDANILEAEVILG-DMVHRGVVPNAQIYN 536

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +LI   C  G L+ AF    EM   ++  P L+TY+ LI+GLCK G+  EA  L  E+  
Sbjct: 537 MLIDGSCIAGKLKDAFRFFDEMVAREI-VPTLVTYNILINGLCKKGKVMEAENLASEITR 595

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K     D +TYN LI G+   G V +A ++ E MK +G  P +  Y  L+ G  KEG L 
Sbjct: 596 KGLSF-DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LV 653

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
             ++++ EM    L PD + Y  LI+C+   G V +A  L   M+ +G + D +T+N ++
Sbjct: 654 LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLI 713

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G  +EG++ +   ++  +   G+     +Y I++   C+  + + A    R M   GF 
Sbjct: 714 LGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFT 773

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           P  +  + L+  L + G + DA +      EM  K + D  A
Sbjct: 774 PSVSICDNLITGLREEGRSHDADVI---CSEMNMKGKDDCRA 812



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 163/318 (51%), Gaps = 2/318 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ PN   +N LI  +CK G LE AF + + MK   +  P +IT+++L++GLC+     E
Sbjct: 247 RVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVE-PTIITFNSLLNGLCRAQMMEE 305

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  + EEM      +PD  TY  L DG  + G VD +  + E     G     +  + L+
Sbjct: 306 AQRVLEEMEVYG-FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILL 364

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           N  CKEG +++A+EV  +     L P  + + T++N +C+ G +++A   +++M+  G +
Sbjct: 365 NALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLR 424

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            + VT+N ++   C    +EEA   ++K+   G+  N  +Y  +++   +    ++  ++
Sbjct: 425 PNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQI 484

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M  +G  P+  +   L+  LCK     +A + L  +V  G  P +  + +L++  C 
Sbjct: 485 LEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCI 544

Query: 497 GRKLLFAFELLDELVIKE 514
             KL  AF   DE+V +E
Sbjct: 545 AGKLKDAFRFFDEMVARE 562



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 187/377 (49%), Gaps = 20/377 (5%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+ ++L+ L R +  E    VL +M          ++  +   F+  +L +  L+  +  
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEME---------VYGFVPDRFTYTTLFDGHLKCGNVD 339

Query: 157 HPITREKPSLK--------AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
             IT  + +++          S  LN L +   ++ A+  LK   ++  L P    FN +
Sbjct: 340 ASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLEN-GLAPVGVFFNTI 398

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +  +C+ G +  A+  +++M+   +  PN +TY++L+   C+     EA +  ++MV K 
Sbjct: 399 VNGYCQVGDINKAYTTIEKMEAVGLR-PNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LP+  TYN LIDG+ R    DR  +I+E M+  G  PNV +Y  L+N  CK+  + EA
Sbjct: 458 -VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEA 516

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           + +  +M +  + P+   Y  LI+  C AG++ +A     EM  R     +VT+NI++ G
Sbjct: 517 EVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILING 576

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC++GK+ EA  +  ++   G+  +  +Y  +++     G ++KA+EL   M   G  P 
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636

Query: 449 YATSNELLVRLCKAGMA 465
             T + L+    K G+ 
Sbjct: 637 LNTYHRLIAGCGKEGLV 653



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 160/301 (53%), Gaps = 11/301 (3%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI  + +    +  F++L+EM+K  +  PN+I+Y  LI+ LCK+    EA  
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK-PNVISYGCLINCLCKDANILEAEV 518

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  +MV +  ++P+A  YN+LIDG C  GK+  A +  + M      P +  Y  L+NG 
Sbjct: 519 ILGDMVHRG-VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+GK+ EA+ +  E+    L  D I Y +LI+ +  AG V +ALEL + MK+ G K  +
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTL 637

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN--FSC--QKGELEKAIE 435
            T++ ++ G  +EG     L ++EK++ + + +N    R++ N    C  + G+++KA  
Sbjct: 638 NTYHRLIAGCGKEG-----LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   M  +G  P   T N L++   K G        +  +   G  P+++++ +L+   C
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC 752

Query: 496 R 496
           +
Sbjct: 753 K 753



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 204/424 (48%), Gaps = 13/424 (3%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           EK  + A ++F+ + +++    N  TY T++D   +  + E    +  +M  E  +    
Sbjct: 230 EKRMKDAEKLFDEMLDRR-VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288

Query: 132 IFLNLMKHFSNCSLHE---RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            F +L+       + E   RVLE       +    P     +T  +  ++   VD +   
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFV----PDRFTYTTLFDGHLKCGNVDASITL 344

Query: 189 LKYS-NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            + +  + +++   TC  +IL+   CK G +E A EVLK+  ++ ++ P  + ++T+++G
Sbjct: 345 SEEAVRKGVQILDYTC--SILLNALCKEGNMEKAEEVLKKFLENGLA-PVGVFFNTIVNG 401

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C+ G   +A    E+M +   + P+ +TYN L+  FC    ++ A+K ++ M   G  P
Sbjct: 402 YCQVGDINKAYTTIEKMEAVG-LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLP 460

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           NV  Y TL++G+ +        ++ +EM+   LKP+ I Y  LINC C+   + EA  +L
Sbjct: 461 NVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVIL 520

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            +M  RG   +   +N+++ G C  GK+++A    +++    I     +Y I++N  C+K
Sbjct: 521 GDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKK 580

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G++ +A  L   +  +G      T N L+     AG  + A      + + G KP  +++
Sbjct: 581 GKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640

Query: 488 ALLV 491
             L+
Sbjct: 641 HRLI 644



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 100/203 (49%)

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           V  + ++   MK +G  P+V +    +       + ++  ++F E+    L+PD   Y  
Sbjct: 128 VSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
            I    + G +  A+EL+  MK  G    +  +N+++GGLC+E ++++A  + +++    
Sbjct: 188 AIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR 247

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N+ +Y  +++  C+ G+LE+A  +   M      P   T N LL  LC+A M E+A 
Sbjct: 248 VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQ 307

Query: 470 IALFGLVEMGFKPESDSWALLVE 492
             L  +   GF P+  ++  L +
Sbjct: 308 RVLEEMEVYGFVPDRFTYTTLFD 330



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 131/280 (46%), Gaps = 4/280 (1%)

Query: 234 SYPNLITYSTLIDGLCKNGRF-REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           S P    +S ++  +C   +   E+ EL+  ++ KD +LP   + N+ ++      + + 
Sbjct: 107 STPMKPLFSDMLLSICSESKMVSESAELYM-LMKKDGVLPSVASLNLFLESLVSTKRYED 165

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   +  +G  P+ F Y   +    K G L+ A E+   MK   + P    Y  +I 
Sbjct: 166 TLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIG 225

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+  R+ +A +L  EM +R    + +T+N ++ G C+ G++EEA  + E++  + +  
Sbjct: 226 GLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEP 285

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
              ++  +LN  C+   +E+A  +L  M   GF+P   T   L     K G   DA+I L
Sbjct: 286 TIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNV-DASITL 344

Query: 473 F-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
               V  G +    + ++L+  +C+   +  A E+L + +
Sbjct: 345 SEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFL 384



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 72/154 (46%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           V E+ EL   MK+ G    + + N+ L  L    + E+ L +  ++   G+  ++  Y  
Sbjct: 128 VSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
            +  + + G+L++AIEL+  M   G  P     N ++  LCK    +DA      +++  
Sbjct: 188 AIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR 247

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P   ++  L++  C+  +L  AF + + + ++
Sbjct: 248 VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVE 281


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 170/299 (56%), Gaps = 5/299 (1%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           TC  NI I+  C+ G LE A  +++ M       P+++TY+TL+ GLCK+ + +EA +  
Sbjct: 152 TC--NIWIRGLCEGGRLEEAVALVESM--DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYL 207

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
             M+++  I PD  TYN +IDG+C+   +  A ++++     G  P+   Y +L+NG C 
Sbjct: 208 RRMMNQGCI-PDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCA 266

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           EG ++ A E+F+E +   LKPD + Y +L+   CR G +  AL+++ EM E GC  DI T
Sbjct: 267 EGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT 326

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +NI++ GLC+ G I +A  ++      G   +  ++  +++  C++ +L+ A++L+  M 
Sbjct: 327 YNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMW 386

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             G  P   T N +L  LCKAG A++       ++  G +P + ++ +L+E  C+  +L
Sbjct: 387 MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQL 445



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 211/431 (48%), Gaps = 16/431 (3%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           ++ TY TI+D   +    +    +L+   ++        + +L+         ER LE+F
Sbjct: 218 DDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELF 277

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKH 211
           ++       KP L   ++ +  L       L  + L+  N+ +     P+   +NI+I  
Sbjct: 278 NEAQA-KDLKPDLVVYNSLVKGLCRQG---LILHALQVMNEMVEDGCHPDIWTYNIVING 333

Query: 212 HCKRGTLESAFEVLKE-MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            CK G +  A  V+ + + K  +  P++ T++T+IDG CK  +   A++L E M     I
Sbjct: 334 LCKMGNISDAAVVMNDAIVKGYL--PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG-I 390

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PDA+TYN +++G C+ GK     +  E M   GC PN   Y  L+  FCK  +L+EA  
Sbjct: 391 APDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 450

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           V   M    L PDTI + TLI+ FCR G +D A  L +++ E+G  A   TFNI++G   
Sbjct: 451 VIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 510

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
            +  ++ A  +  ++   G   +  +YR++++ SC+   +++A   L  M+ +GF+P  A
Sbjct: 511 SKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMA 570

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T   +L  L       +A   +  +V MG  PE     ++  ++   +K + A ++L E 
Sbjct: 571 TFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE-----VVDTILSTDKKEIAAPKILVEE 625

Query: 511 VIKESGTIQVP 521
           ++K+ G I  P
Sbjct: 626 LMKK-GHISYP 635



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 159/316 (50%), Gaps = 3/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+     + IK  C  G    A  +L+ + +       L  Y T++ GL  +G   +A
Sbjct: 41  VAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPL-AYCTVVRGLYAHGHGYDA 99

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM+ +D + PD  T+N ++   C+ G +  +  ++  +   G + N F     + 
Sbjct: 100 RHLFDEMLRRD-VFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIR 158

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+ G+L+EA  + + M  ++  PD + Y TL+   C+  +V EA + L+ M  +GC  
Sbjct: 159 GLCEGGRLEEAVALVESMDAYI-APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP 217

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+N I+ G C+   ++EA  +L+   + G   ++ +Y  ++N  C +G++E+A+EL 
Sbjct: 218 DDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELF 277

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
                +   P     N L+  LC+ G+   A   +  +VE G  P+  ++ +++  +C+ 
Sbjct: 278 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKM 337

Query: 498 RKLLFAFELLDELVIK 513
             +  A  ++++ ++K
Sbjct: 338 GNISDAAVVMNDAIVK 353



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 141/280 (50%), Gaps = 4/280 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    Y+ ++D L       +A +++  M+S   + PDA T+ V I  FC  G+   A +
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAG-VAPDARTHTVRIKSFCITGRPHVALR 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   GC+     Y T++ G    G   +A+ +FDEM    + PD   +  +++  C
Sbjct: 67  LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG-IYLNK 414
           + G + E+  LL ++ +RG   +  T NI + GLC  G++EEA+ ++E +  D  I  + 
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM--DAYIAPDV 184

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  ++   C+  ++++A + LR M+ +G +P   T N ++   CK  M ++A   L  
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            +  GF P+  ++  L+  +C    +  A EL +E   K+
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 36/245 (14%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           GC P    Y  +M+         +A +V+  M +  + PD   +T  I  FC  GR   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 364 LELLKEMKERGCKA-----------------------------------DIVTFNIILGG 388
           L LL+ + ERGC                                     D+ TFN +L  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC++G I E+  +L K+   G+ +NK +  I +   C+ G LE+A+ L+  M      P 
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPD 183

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N L+  LCK    ++AA  L  ++  G  P+  ++  +++  C+   L  A ELL 
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 509 ELVIK 513
           + + K
Sbjct: 244 DAIFK 248


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 179/339 (52%), Gaps = 4/339 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++    T +N L +      A   L+ S +    +P+  I+  +I   CK   +  AF
Sbjct: 158 QPNVVTYGTLINGLCKVGNTSAAIRLLR-SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  +M    +S P++ TY++L+  LC    ++    L  +MV+  +ILPD + ++ ++D
Sbjct: 217 NLFSQMVGQGIS-PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS-KILPDVVIFSTVVD 274

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+ GKV  A +I++ M   G  P+V  YTTLM+G C + ++ EA +VFD M      P
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 334

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D I YTTLIN +C+  ++D+A+ L +EM  +    D  T+N ++ GLC  G++++A+ + 
Sbjct: 335 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALF 394

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   G   +  +Y I+L+  C+   LE+A+ LL+ +      P     N ++  +C+A
Sbjct: 395 HEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA 454

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
           G  E A      L   G  P   ++ +++  +C+ R LL
Sbjct: 455 GELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK-RGLL 492



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 207/419 (49%), Gaps = 9/419 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ + ++ GF  N  TY T+++ L +     A   +LR M    C+    I+ +++
Sbjct: 145 ALHLFDKMIDE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSII 203

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                         +F ++    I+ +  +  ++   L  L E   V    N +  S   
Sbjct: 204 DSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS--- 260

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            ++ P+  IF+ ++   CK G +  A E++  M +  +  P+++TY+TL+DG C      
Sbjct: 261 -KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE-PDVVTYTTLMDGHCLQSEMD 318

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA+++F+ MV K    PD ++Y  LI+G+C+  K+D+A  + E M      P+   Y TL
Sbjct: 319 EAVKVFDMMVRKG-FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 377

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M+G C  G+LQ+A  +F EM      PD + Y+ L++  C+   ++EA+ LLK ++    
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNL 437

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             DI  +NII+ G+CR G++E A  +   L   G++ +  +Y I+++  C++G L +A +
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           L   M      P   T N +     +      A   L  ++  GF  +  +  LLVE++
Sbjct: 498 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 207/424 (48%), Gaps = 20/424 (4%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNC----SLHERVL 150
           +A +L  +A+ K +  V ++  QM         +   I +N   H +      S+  ++L
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 118

Query: 151 EMFHKIHPITREKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           ++ H+  P T         +T +  L +E    +    F K  ++    +PN   +  LI
Sbjct: 119 KLGHQPDPTT--------FTTLIRGLCVEGKIGEALHLFDKMIDEGF--QPNVVTYGTLI 168

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G   +A  +L+ M++     P+++ Y+++ID LCK+ +  EA  LF +MV +  
Sbjct: 169 NGLCKVGNTSAAIRLLRSMEQGNCQ-PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG- 226

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I PD  TY  L+   C   +      ++  M N+   P+V  ++T+++  CKEGK+ EA 
Sbjct: 227 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 286

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+ D M    ++PD + YTTL++  C    +DEA+++   M  +G   D++++  ++ G 
Sbjct: 287 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 346

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+  KI++A+ + E++       +  +Y  +++  C  G L+ AI L   M+ RG +P  
Sbjct: 347 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDL 406

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T + LL  LCK    E+A   L  +      P+   + ++++ +CR  +L  A +L   
Sbjct: 407 VTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 466

Query: 510 LVIK 513
           L  K
Sbjct: 467 LSSK 470



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 177/357 (49%), Gaps = 18/357 (5%)

Query: 80  EIFNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E FN  S+   +G + +  TY +++  L    +++ V  +L QM          IF  ++
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 138 ----KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
               K       HE V  M  +       +P +   +T ++     +++D A   +K  +
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQR-----GVEPDVVTYTTLMDGHCLQSEMDEA---VKVFD 325

Query: 194 QHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +R    P+   +  LI  +CK   ++ A  + +EM + +   P+  TY+TL+ GLC  
Sbjct: 326 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW-IPDTKTYNTLMHGLCHV 384

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR ++AI LF EMV++ Q +PD +TY++L+D  C+   ++ A  +++ ++ +  NP++  
Sbjct: 385 GRLQDAIALFHEMVARGQ-MPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  +++G C+ G+L+ A+++F  + +  L P    Y  +I+  C+ G ++EA +L  EM 
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
              C  D  T+N I  G  +  +   A+ +LE++   G   + ++  +++      G
Sbjct: 504 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 2/320 (0%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H+   P+   F  L+    K     +   +  +M    +  PN+ T + LI+  C   R 
Sbjct: 49  HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVP-PNVYTLNILINSFCHLNRV 107

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A  +  +++      PD  T+  LI G C  GK+  A  + + M + G  PNV  Y T
Sbjct: 108 GFAFSVLAKILKLGH-QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGT 166

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK G    A  +   M+    +PD + YT++I+  C+  +V EA  L  +M  +G
Sbjct: 167 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 226

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI T+  ++  LC   + +    +L ++    I  +   +  V++  C++G++ +A 
Sbjct: 227 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 286

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           E++ +M+ RG  P   T   L+   C     ++A      +V  GF P+  S+  L+   
Sbjct: 287 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 346

Query: 495 CRGRKLLFAFELLDELVIKE 514
           C+  K+  A  L +E+  KE
Sbjct: 347 CKIHKIDKAMYLFEEMCRKE 366



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 2/188 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F+ + +    P  + +  L+    +       L L  +M   G   ++ T NI
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   ++  A  +L K+   G   +  ++  ++   C +G++ +A+ L   M+  G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF-KPESDSWALLVELICRGRKLLFA 503
           F P+  T   L+  LCK G    AAI L   +E G  +P+   +  +++ +C+ R++  A
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTS-AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 215

Query: 504 FELLDELV 511
           F L  ++V
Sbjct: 216 FNLFSQMV 223


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 176/317 (55%), Gaps = 2/317 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ P+   +N LI        L  A ++  +MKK  ++ PN+ T++ L+DG CK G+  +
Sbjct: 231 RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENIN-PNVYTFNILVDGFCKEGKVND 289

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +   M+ KD I PD +TYN L+DG+C   KV++AK I + M + G   NV  YTT++
Sbjct: 290 AKVVLAIMM-KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMV 348

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NGFCK   + EA  +F+EM+   + P+ + Y++LI+  C+ GR+  AL+L+ EM +RG  
Sbjct: 349 NGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP 408

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +IVT++ IL  LC+   +++A+ +L  L   GI  +  +Y I++   CQ G LE A  +
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +L +G+         ++   C  G  + A   L  + + G  P + ++ L++  +  
Sbjct: 469 FEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFE 528

Query: 497 GRKLLFAFELLDELVIK 513
             +   A +LL E++++
Sbjct: 529 KDENDTAEKLLREMIVR 545



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 173/349 (49%), Gaps = 37/349 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    FN LIK  C +G +  A     +   +Q  + + ++Y TLI+GLCK GR   A++
Sbjct: 129 PTAITFNTLIKGLCLKGHIHQALH-FHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQ 187

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRG-------------------------------- 287
           L + +  K  + P+A+ YN++ID  C+                                 
Sbjct: 188 LLKRVDGK-LVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGF 246

Query: 288 ---GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
               K++ A  +   MK    NPNV+ +  L++GFCKEGK+ +AK V   M    +KPD 
Sbjct: 247 SAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDV 306

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + Y +L++ +C   +V++A ++   M   G  A++  +  ++ G C+   ++EA+ + E+
Sbjct: 307 VTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEE 366

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +    I  N  +Y  +++  C+ G +  A++L+  M  RG  P+  T + +L  LCK   
Sbjct: 367 MRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHH 426

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + A   L  L + G +P+  ++ +L++ +C+  +L  A  + ++L++K
Sbjct: 427 VDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVK 475



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 196/387 (50%), Gaps = 5/387 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S+G  I+ +        AL++   V + K    N   Y  I+D + + K       +  
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRV-DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 225

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           QM  +        +  L+  FS  S     +++F+K+       P++   +  ++   + 
Sbjct: 226 QMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKK-ENINPNVYTFNILVDGFCKE 284

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            +V+ A+  L    +   +KP+   +N L+  +C    +  A ++   M    +   N+ 
Sbjct: 285 GKVNDAKVVLAIMMKD-DIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGV-IANVQ 342

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            Y+T+++G CK     EAI LFEEM  + +I+P+ +TY+ LIDG C+ G++  A K+++ 
Sbjct: 343 IYTTMVNGFCKIKMVDEAINLFEEMRCR-KIIPNVVTYSSLIDGLCKLGRIFYALKLVDE 401

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M + G  PN+  Y+++++  CK   + +A  +   +K+  ++PD   YT LI   C++GR
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGR 461

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A  + +++  +G   D+  + +++ G C +G  ++AL +L K+  +G   N  +Y +
Sbjct: 462 LEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYEL 521

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFL 446
           V+    +K E + A +LLR M+ RG L
Sbjct: 522 VILSLFEKDENDTAEKLLREMIVRGLL 548



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 83/173 (47%), Gaps = 2/173 (1%)

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P T  +  +++   +A     AL L ++M+  G ++D  TFNI++    + G    +  +
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K+   G +    ++  ++   C KG + +A+     ++ +GF     +   L+  LCK
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 462 AGMAEDAAIALFGLVEMGF-KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G    AA+ L   V+    +P +  + ++++ +C+ + +  AF+L  ++V K
Sbjct: 179 VGRIT-AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 231/455 (50%), Gaps = 7/455 (1%)

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQK-GFNHNNATYATILDKLARYKKFEAVDA 116
           R IS  A + + +C K+   A E+F  +S  + GF H+  T   +LD  AR K+      
Sbjct: 81  REISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGN 140

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           +L+       +     +  L+  +      E    +  ++       PSLK  +  L+ L
Sbjct: 141 LLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGL 200

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
            +S +V  A +  +   + + +   T  F+ILI    K G +  A  + +E   +  +  
Sbjct: 201 CKSGKVLAAMDHFEAVRRSMPVSAAT--FSILINGLVKAGMMIQAHSLAQETTTNGCTI- 257

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           ++ TY+ +++ L KN + +EA+ L E+ ++ +   P   TYN L++G C+ G+++ A  +
Sbjct: 258 DIHTYTAIVNWLAKNKKIQEAVALMEK-ITANGCTPTIATYNALLNGLCKMGRLEEAIDL 316

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +  + +NGC P+V  YT+L++G  KE +  EA ++F EM +  L  DT+ YT LI    +
Sbjct: 317 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 376

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++ +A  + K M   GC  D+VT + ++ GL + G+I  A+ + + +   G+  N+  
Sbjct: 377 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 436

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-L 475
           Y  +++  C+  +++ A+E+L  M      P   T N L+  LCK+G  E AA A F  +
Sbjct: 437 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE-AARAFFDEM 495

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E G KP+  ++ +L+  +C+      A  +LD++
Sbjct: 496 LEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM 530



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 170/350 (48%), Gaps = 39/350 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +P+   +N+LI  +C     E AF V++EM++     P+L T++ ++ GLCK+G+   A
Sbjct: 150 FRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGG----------------------------- 288
           ++ FE +  +  +   A T+++LI+G  + G                             
Sbjct: 210 MDHFEAV--RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVN 267

Query: 289 ------KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
                 K+  A  +ME +  NGC P +  Y  L+NG CK G+L+EA ++  ++ +    P
Sbjct: 268 WLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 327

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + YT+LI+   +  R  EA +L KEM  RG   D V +  ++ GL + GKI +A  + 
Sbjct: 328 DVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVY 387

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +   G   +  +   +++   + G +  A+ + + M  RG  P+    + L+  LCKA
Sbjct: 388 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 447

Query: 463 GMAEDAAIALFGLVEMGF-KPESDSWALLVELICRGRKLLFAFELLDELV 511
               D A+ +   ++  F  P++ ++ +L++ +C+   +  A    DE++
Sbjct: 448 -RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 496



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 196/424 (46%), Gaps = 17/424 (4%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           ++ A ++ +   K+ Q A+ +   ++   G     ATY  +L+ L +  + E    +LR+
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITAN-GCTPTIATYNALLNGLCKMGRLEEAIDLLRK 319

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIE 178
           +    C      + +L+         +R  E +     +     +L  +  +  +  L++
Sbjct: 320 IVDNGCTPDVVTYTSLIDGLGK---EKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 376

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           + ++  A +  K    H    P+    + +I    K G + +A  + K M+   ++ PN 
Sbjct: 377 TGKIPQASSVYKTMTSH-GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA-PNE 434

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           + YS LI GLCK  +   A+E+  +M  K    PD +TYN+LIDG C+ G V+ A+   +
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 493

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M   GC P+V+ Y  L++G CK G    A  V D+M +         Y++L++  C++G
Sbjct: 494 EMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSG 548

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           +++    L  EM ER   A+  T   ++  LC+  +++EA+ +   +  +G+  +  +Y 
Sbjct: 549 KLEGGCMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYN 606

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +++   + G++ +   + + M  R + P   T N LL  +  A   + A      +   
Sbjct: 607 SIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGR 665

Query: 479 GFKP 482
           G+ P
Sbjct: 666 GYVP 669



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 120/315 (38%), Gaps = 88/315 (27%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
            L++  K PQ A  ++ T++   G   +  T +T++D L++  +  A   + + M     
Sbjct: 373 GLLQTGKIPQ-ASSVYKTMTSH-GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 430

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE----SNQV 182
             +E ++  L+         +  LEM  ++     +K      +   N+LI+    S  V
Sbjct: 431 APNEVVYSALIHGLCKARKMDCALEMLAQM-----KKAFCTPDTITYNILIDGLCKSGDV 485

Query: 183 DLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           + A+ F    ++ L    KP+   +NILI   CK G  ++A  VL +M  S+        
Sbjct: 486 EAARAFF---DEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR------FV 536

Query: 241 YSTLIDGLCKNG----------------------------------RFREAIELFEEM-- 264
           YS+L+DGLCK+G                                  R  EA+ LF  +  
Sbjct: 537 YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 596

Query: 265 ---------------------VSKDQIL---------PDALTYNVLIDGFCRGGKVDRAK 294
                                V++ Q +         PD +TYN L++G     ++DRA 
Sbjct: 597 EGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAH 656

Query: 295 KIMEFMKNNGCNPNV 309
                M   G  P V
Sbjct: 657 YYYLEMTGRGYVPPV 671


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 170/328 (51%), Gaps = 37/328 (11%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN  +++ +I   CK   +  A+ +  EM    +S  +++TYSTLI G C  G+ +EAI
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS-ADVVTYSTLIYGFCIVGKLKEAI 502

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM-- 316
            L  EMV K  I PD  TY +L+D   + GKV  AK ++  M      P+VF Y TLM  
Sbjct: 503 GLLNEMVLK-TINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG 561

Query: 317 ---------------------------------NGFCKEGKLQEAKEVFDEMKNFLLKPD 343
                                            NGFCK   + EA  +F EM    + PD
Sbjct: 562 YLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ Y++L++  C++GR+    +L+ EM++RG  AD++T+N ++ GLC+ G +++A+ +  
Sbjct: 622 TVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFN 681

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+   GI  N  ++ I+L+  C+ G L+ A E+ + +L +G+       N ++   CK G
Sbjct: 682 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQG 741

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLV 491
           + E+A   L  + E G  P + ++ +++
Sbjct: 742 LLEEALTMLSKMEENGCIPNAVTFDIII 769



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 194/353 (54%), Gaps = 4/353 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N   Y+TI+D L +Y+       +  +MT +        +  L+  F      +  + + 
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLL 505

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +++  +    P ++  +  ++ L +  +V  A++ L    +   +KP+   +N L+  + 
Sbjct: 506 NEM-VLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKAC-VKPDVFTYNTLMNGYL 563

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
               ++ A  V   M    ++ P++ TY+ LI+G CK+    EA+ LF+EM  K+ + PD
Sbjct: 564 LVYEVKKAQHVFNAMSLMGVT-PDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV-PD 621

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TY+ L+DG C+ G++     +++ M++ G   +V  Y +L++G CK G L +A  +F+
Sbjct: 622 TVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFN 681

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           +MK+  ++P+T  +T L++  C+ GR+ +A E+ +++  +G   D+  +N+++ G C++G
Sbjct: 682 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQG 741

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            +EEAL ML K+  +G   N  ++ I++N   +K E +KA +LLR M+ RG L
Sbjct: 742 LLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 188/413 (45%), Gaps = 72/413 (17%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +T +N +        A  FL+  +  L  KPN  ++N +I   CK   +  A+ +  EM 
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKIDGRLA-KPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
              +S  N++TYSTLI G C  G+ +EA+ L   MV K  I P+  TYN+L+D  C+ GK
Sbjct: 161 VKGIS-ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLK-TINPNVCTYNILVDALCKEGK 218

Query: 290 VDRAKKIMEFM-----KNN------------------------------GCNPNVFNYTT 314
           V  AK ++  M     K+N                              G  P+V +Y  
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNI 278

Query: 315 LMNGFCKEGKLQEAKEVFDEM---------------------KNFL-------------L 340
           ++NGFCK  ++ +A  +F EM                     K++              +
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGI 338

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           +PD      LINCFC  G++     +L ++ +RG     VT N ++ GLC +G++++AL 
Sbjct: 339 QPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH 398

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
             +KL   G  LN+ SY  ++N  C+ G+   AI+LLR +  R   P+    + ++  LC
Sbjct: 399 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC 458

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           K  +  +A      +   G   +  +++ L+   C   KL  A  LL+E+V+K
Sbjct: 459 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLK 511



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 148/264 (56%), Gaps = 2/264 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   + IL+    K G ++ A  VL  M K+ +  P++ TY+TL++G       ++A
Sbjct: 513 INPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVK-PDVFTYNTLMNGYLLVYEVKKA 571

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F  M S   + PD  TY +LI+GFC+   VD A  + + M      P+   Y++L++
Sbjct: 572 QHVFNAM-SLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD 630

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G++    ++ DEM++     D I Y +LI+  C+ G +D+A+ L  +MK++G + 
Sbjct: 631 GLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRP 690

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +  TF I+L GLC+ G++++A  + + L   G +L+   Y +++   C++G LE+A+ +L
Sbjct: 691 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTML 750

Query: 438 RLMLCRGFLPHYATSNELLVRLCK 461
             M   G +P+  T + ++  L K
Sbjct: 751 SKMEENGCIPNAVTFDIIINALFK 774



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 217/467 (46%), Gaps = 39/467 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TYETCK 127
           AL + N V   K  N N  TY  ++D L +  K +   +VL  M          TY T  
Sbjct: 187 ALGLLN-VMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYST-- 243

Query: 128 FHEGIFL----NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL-------- 175
             +G FL       +H  N      V    H  + +      +K +   LNL        
Sbjct: 244 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSR 303

Query: 176 ---LIESNQV-DLAQNFLKYS-----NQHLRLK---PNTCIFNILIKHHCKRGTLESAFE 223
              +I+ N++ D       YS     +  L LK   P+    NILI   C  G +   F 
Sbjct: 304 FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFS 363

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VL ++ K     P+ +T +TLI GLC  G+ ++A+   ++++++   L + ++Y  LI+G
Sbjct: 364 VLAKILKRGYP-PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL-NQVSYATLING 421

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G    A K++  +      PNV  Y+T+++  CK   + EA  +F EM    +  D
Sbjct: 422 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 481

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y+TLI  FC  G++ EA+ LL EM  +    D+ T+ I++  L +EGK++EA  +L 
Sbjct: 482 VVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLA 541

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +    +  +  +Y  ++N      E++KA  +   M   G  P   T   L+   CK+ 
Sbjct: 542 VMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSK 601

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           M ++A      + +    P++ +++ LV+ +C+  ++ + ++L+DE+
Sbjct: 602 MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM 648



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 160/379 (42%), Gaps = 69/379 (18%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFE-----VLKEMKKSQMSY------------------- 235
           P+T   N LIK  C +G ++ A       + +  + +Q+SY                   
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 236 ----------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKD----------------- 268
                     PN+  Y+T+ID LCK     EA  LF EM  K                  
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 269 -----------------QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
                             I P+  TYN+L+D  C+ GKV  AK ++  M       NV  
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+TLM+G+    ++++A+ VF+ M    + PD   Y  +IN FC+  RVD+AL L KEM 
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
                  I+ FN IL    +      A+ +  +L   GI  +  +  I++N  C  G++ 
Sbjct: 301 LSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQIT 359

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
               +L  +L RG+ P   T N L+  LC  G  + A      L+  GF+    S+A L+
Sbjct: 360 FGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLI 419

Query: 492 ELICRGRKLLFAFELLDEL 510
             +C+      A +LL ++
Sbjct: 420 NGVCKIGDTRGAIKLLRKI 438



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 123/241 (51%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PD +T N LI G C  G+V  A    + +   G   N  +Y TL+NG C+ G  + A + 
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             ++   L KP+   Y T+I+  C+   V EA  L  EM  +G  A++VT++ ++ G C 
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            GK++EALG+L  +    I  N  +Y I+++  C++G++++A  +L +ML      +  T
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + L+         + A      +  MG  P+  S+ +++   C+ +++  A  L  E++
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300

Query: 512 I 512
           +
Sbjct: 301 L 301



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 99/189 (52%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P+     TL+ G C +G+++EA    D++     + + + Y TLIN  CR G    A
Sbjct: 58  GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           ++ L+++  R  K ++  +N I+  LC+   + EA G+  ++   GI  N  +Y  ++  
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C  G+L++A+ LL +M+ +   P+  T N L+  LCK G  ++A   L  +++   K  
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237

Query: 484 SDSWALLVE 492
             +++ L++
Sbjct: 238 VITYSTLMD 246



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 2/156 (1%)

Query: 360 VDEALEL--LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           VD+A+ L  L ++ +RG   D VT N ++ GLC +G+++EAL   +KL   G  LN+ SY
Sbjct: 42  VDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSY 101

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++N  C+ G+   AI+ LR +  R   P+    N ++  LCK  +  +A      +  
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTV 161

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G      +++ L+   C   KL  A  LL+ +V+K
Sbjct: 162 KGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLK 197


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 179/317 (56%), Gaps = 2/317 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ P+   FN LI   C  G L+ AF +  EM    ++ P++ T+S L+D LCK+G    
Sbjct: 229 RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNIN-PDVYTFSILVDALCKDGNITR 287

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +   M+ K  ++PD +TY+ L+DG+C   +V++AK +   M   G  P+  +Y  ++
Sbjct: 288 AKNMLAVMM-KQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMI 346

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG  K   + EA  +F EM    + PDT+ Y +LI+  C+ GR+  A +L+ EM   G  
Sbjct: 347 NGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIP 406

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           ADI+T+N ++  LC+   I++A+ +++K+   GI  +  +Y I+++  C+ G L+ A ++
Sbjct: 407 ADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDV 466

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + +L +G+  +  T N ++  LCK G+  +A + L  +   G  P++ ++  ++  + R
Sbjct: 467 FQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFR 526

Query: 497 GRKLLFAFELLDELVIK 513
             +   A +LL E++I+
Sbjct: 527 KDENEKAEKLLREMIIR 543



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 195/364 (53%), Gaps = 14/364 (3%)

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILI 209
           FH++  + R  PS+   +  L  ++++N  +     +  S+Q L LK   P    FNIL+
Sbjct: 45  FHRMLRM-RPTPSIVEFNKILGSIVKANN-NHYTTAISLSHQ-LELKGITPTIVTFNILV 101

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
             +C  G +  AF +  ++ K    +P  IT++TLI+G+C NG+ +EA+   + +++   
Sbjct: 102 NCYCHLGEMTFAFSIFAKILKLGY-HPTTITFNTLINGICLNGKLKEALHFHDHVIALGF 160

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            L D ++Y  LI+G C+ G+   A ++++ ++    N +V  Y  ++N  CK+  + +A 
Sbjct: 161 HL-DQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +++ EM    + PD + + +LI  FC  G++ EA  L  EM  +    D+ TF+I++  L
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C++G I  A  ML  +   G+  +  +Y  +++  C   E+ KA  +   M   G  PH 
Sbjct: 280 CKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHA 339

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEM---GFKPESDSWALLVELICRGRKLLFAFEL 506
            + N ++  L K  M  D A++LF   EM   G  P++ ++  L++ +C+  ++ +A++L
Sbjct: 340 HSYNIMINGLGKIKMV-DEALSLFK--EMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQL 396

Query: 507 LDEL 510
           +DE+
Sbjct: 397 VDEM 400



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 187/373 (50%), Gaps = 5/373 (1%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E + AL++   + E K  N +   Y  I++ L + K       +  +M  +        F
Sbjct: 179 ETRAALQMLKKI-EGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTF 237

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
            +L+  F      +    +FH++  +    P +   S  ++ L +   +  A+N L    
Sbjct: 238 NSLILGFCVVGQLKEAFGLFHEM-VLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMM 296

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   + P+   ++ L+  +C    +  A  V   M +  ++ P+  +Y+ +I+GL K   
Sbjct: 297 KQ-GVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA-PHAHSYNIMINGLGKIKM 354

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA+ LF+EM  K  I PD +TYN LIDG C+ G++  A ++++ M NNG   ++  Y 
Sbjct: 355 VDEALSLFKEMCCKG-IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYN 413

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +L++  CK   + +A  +  ++K+  ++P    Y  LI+  C+ GR+  A ++ +++  +
Sbjct: 414 SLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK 473

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   +  T+NI++ GLC+EG   EA  +L K+  +GI  +  +Y  ++    +K E EKA
Sbjct: 474 GYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKA 533

Query: 434 IELLRLMLCRGFL 446
            +LLR M+ RG L
Sbjct: 534 EKLLREMIIRGLL 546



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 168/337 (49%), Gaps = 7/337 (2%)

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCI--FNILIKHHCKRGT--LESAFEVLKEMKKSQM 233
           +SN  D+  +   + ++ LR++P   I  FN ++    K       +A  +  +++   +
Sbjct: 32  KSNDFDVNNDVSSF-HRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGI 90

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           + P ++T++ L++  C  G    A  +F +++ K    P  +T+N LI+G C  GK+  A
Sbjct: 91  T-PTIVTFNILVNCYCHLGEMTFAFSIFAKIL-KLGYHPTTITFNTLINGICLNGKLKEA 148

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
               + +   G + +  +Y TL+NG CK G+ + A ++  +++  L+  D + Y  +IN 
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+   V +A +L  EM  +    D+VTFN ++ G C  G+++EA G+  ++    I  +
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             ++ I+++  C+ G + +A  +L +M+ +G +P   T + L+   C       A     
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFS 328

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +  +G  P + S+ +++  + + + +  A  L  E+
Sbjct: 329 TMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEM 365



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 142/254 (55%), Gaps = 9/254 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   S+ ++     N+V+ A++    +   L + P+   +NI+I    K   ++ A  
Sbjct: 302 PDVVTYSSLMDGYCLVNEVNKAKHVFS-TMSRLGVAPHAHSYNIMINGLGKIKMVDEALS 360

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + KEM    ++ P+ +TY++LIDGLCK GR   A +L +EM   + I  D LTYN LID 
Sbjct: 361 LFKEMCCKGIA-PDTVTYNSLIDGLCKLGRISYAWQLVDEM-HNNGIPADILTYNSLIDV 418

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+   +D+A  +++ +K+ G  P+++ Y  L++G CK G+L+ A++VF ++   L+K  
Sbjct: 419 LCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDL---LIKGY 475

Query: 344 TIG---YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           ++    Y  +IN  C+ G  +EA  LL +M+  G   D VT+  I+  L R+ + E+A  
Sbjct: 476 SVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEK 535

Query: 401 MLEKLWYDGIYLNK 414
           +L ++   G+ L K
Sbjct: 536 LLREMIIRGLLLCK 549


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 175/322 (54%), Gaps = 3/322 (0%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
            T +N L ++ +       L+    H  +KP+  ++N +I   CK   L  A +V  EM 
Sbjct: 166 GTLINGLCKTGETKAVARLLRKLEGH-SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
              +S P+++TY+TLI G C  G  +EA  L  EM  K+ I P+  T+N+LID   + GK
Sbjct: 225 VKGIS-PDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN-INPNVCTFNILIDALSKEGK 282

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +  AK ++  M      P+VF Y +L++G+    +++ AK VF  M    + PD   YT 
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +IN  C+   VDEA+ L +EMK +    DIVT+N ++ GLC+   +E A+ + +++   G
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I  +  SY I+L+  C+ G LE A E+ + +L +G+  +      L+ RLCKAG  ++A 
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEAL 462

Query: 470 IALFGLVEMGFKPESDSWALLV 491
                + + G  P++ ++ +++
Sbjct: 463 DLKSKMEDKGCMPDAVTFDIII 484



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 195/371 (52%), Gaps = 42/371 (11%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  +  +Y T+++ L +  + +AV  +LR++        EG                 
Sbjct: 156 QGFQLDQVSYGTLINGLCKTGETKAVARLLRKL--------EG----------------- 190

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNI 207
                H +      KP +   +T +N L ++  +  A +   YS   ++ + P+   +  
Sbjct: 191 -----HSV------KPDVVMYNTIINSLCKNKLLGDACDV--YSEMIVKGISPDVVTYTT 237

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   C  G L+ AF +L EMK   ++ PN+ T++ LID L K G+ +EA  L   M+ K
Sbjct: 238 LIHGFCIMGHLKEAFSLLNEMKLKNIN-PNVCTFNILIDALSKEGKMKEAKILLAVMM-K 295

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I PD  TYN LIDG+    +V  AK +   M   G  P+V  YT ++NG CK   + E
Sbjct: 296 ACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDE 355

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F+EMK+  + PD + Y +LI+  C+   ++ A+ L K MKE+G + D+ ++ I+L 
Sbjct: 356 AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLD 415

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G++E+A  + ++L   G +LN  +Y +++N  C+ G  ++A++L   M  +G +P
Sbjct: 416 GLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMP 475

Query: 448 HYATSNELLVR 458
             A + ++++R
Sbjct: 476 D-AVTFDIIIR 485



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 171/351 (48%), Gaps = 37/351 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+ C  +ILI   C +  +  AF V   + K    +PN IT +TLI GLC  G  ++A
Sbjct: 88  ITPDLCTLSILINCFCHQAHITLAFSVFANILKRGF-HPNAITLNTLIKGLCFRGEIKKA 146

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +   +++V++   L D ++Y  LI+G C+ G+     +++  ++ +   P+V  Y T++N
Sbjct: 147 LYFHDQLVAQGFQL-DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIN 205

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK   L +A +V+ EM    + PD + YTTLI+ FC  G + EA  LL EMK +    
Sbjct: 206 SLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINP 265

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLW--------------YDGIYL----------- 412
           ++ TFNI++  L +EGK++EA  +L  +                DG +L           
Sbjct: 266 NVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVF 325

Query: 413 ----------NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
                     +   Y  ++N  C+   +++A+ L   M  +  +P   T N L+  LCK 
Sbjct: 326 YSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 385

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              E A      + E G +P+  S+ +L++ +C+  +L  A E+   L+ K
Sbjct: 386 HHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAK 436



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 152/315 (48%), Gaps = 2/315 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +R  P T  FN ++          +   + K+ + + ++ P+L T S LI+  C      
Sbjct: 51  MRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGIT-PDLCTLSILINCFCHQAHIT 109

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A  +F  ++ K    P+A+T N LI G C  G++ +A    + +   G   +  +Y TL
Sbjct: 110 LAFSVFANIL-KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTL 168

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK G+ +    +  +++   +KPD + Y T+IN  C+   + +A ++  EM  +G 
Sbjct: 169 INGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 228

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VT+  ++ G C  G ++EA  +L ++    I  N  ++ I+++   ++G++++A  
Sbjct: 229 SPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKI 288

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL +M+     P   T N L+         + A    + + + G  P+   +  ++  +C
Sbjct: 289 LLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLC 348

Query: 496 RGRKLLFAFELLDEL 510
           + + +  A  L +E+
Sbjct: 349 KTKMVDEAMSLFEEM 363



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 95/207 (45%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P  F++  +++             +F + +   + PD    + LINCFC    +  A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              + +RG   + +T N ++ GLC  G+I++AL   ++L   G  L++ SY  ++N  C+
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            GE +    LLR +      P     N ++  LCK  +  DA      ++  G  P+  +
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  L+   C    L  AF LL+E+ +K
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLK 261


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 199/417 (47%), Gaps = 73/417 (17%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P     +T L  L + +Q+   ++ L    ++  L PN   +NIL+  +CK   L+ A E
Sbjct: 244 PDNVTYNTVLTALCKRSQLTQVRDLL-LQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAE 302

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V++ M    M  P++ TY+T++ GLC  G+  EA+ L ++M S  +++PD +TYN LIDG
Sbjct: 303 VIELMTGKGM-LPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESF-KLVPDVVTYNTLIDG 360

Query: 284 -----------------------------------FCRGGKVDRAKKIMEFMKNNGCNPN 308
                                              FC  GK+D A  +M  M  +G +P+
Sbjct: 361 CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPD 420

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT------------------------ 344
            F Y T++NG+CK GK+ EA ++ DEM    LK DT                        
Sbjct: 421 CFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTM 480

Query: 345 -----------IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
                      + Y TLI  + +  + D AL+L +EMKE G  A I+T+N I+ GLC  G
Sbjct: 481 KARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSG 540

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           K ++A+  L +L   G+  ++++  I+++  C +G +EKA +    M+     P   T N
Sbjct: 541 KTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCN 600

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LL  LC+ GM E         +  G   ++ ++ +++   C+ R+L  AF+L+ E+
Sbjct: 601 ILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEM 657



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 200/375 (53%), Gaps = 17/375 (4%)

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ------HLRLKPNTCI 204
           ++F+K+  + R +P+L   +T LN L+ SN    + + L +S +       L ++PN   
Sbjct: 159 QIFNKMKRL-RFRPNLLTCNTLLNALVRSN----SSHSLVFSREVFQDAVKLGVQPNVNT 213

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNILI  +C     E A  ++ +M +     P+ +TY+T++  LCK  +  +  +L  +M
Sbjct: 214 FNILIHGYCSDNNTEEALRLINQMGEYGCC-PDNVTYNTVLTALCKRSQLTQVRDLLLQM 272

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
                + P+  TYN+L+ G+C+   +  A +++E M   G  P+V+ Y T++ G C EGK
Sbjct: 273 -KNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK 331

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLIN-CFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           + EA  + D+M++F L PD + Y TLI+ CF   G  D A +L++EMK RG K + VT N
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGS-DAAFKLVEEMKARGVKENGVTHN 390

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++   C EGKI+EA  ++ K+   G   +  +Y  ++N  C+ G++ +A +++  M  +
Sbjct: 391 IMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK 450

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G      T N LL  +C     +DA        + G+  +  ++  L+    +  +   A
Sbjct: 451 GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510

Query: 504 FELLDELVIKESGTI 518
            +L +E+  KE+G +
Sbjct: 511 LKLWEEM--KETGIV 523



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 147/316 (46%), Gaps = 35/316 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K N    NI+IK  C  G ++ A  V+ +M +S  S P+  TY+T+I+G CK G+  EA
Sbjct: 382 VKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFS-PDCFTYNTMINGYCKAGKMAEA 440

Query: 258 IELFEEM----------------------------------VSKDQILPDALTYNVLIDG 283
            ++ +EM                                    K   + D +TY  LI G
Sbjct: 441 YKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMG 500

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           + +  + DRA K+ E MK  G    +  Y T++ G C  GK  +A +  +E+    L PD
Sbjct: 501 YFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPD 560

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
                 +I+ +C  G V++A +   +M E   K DI T NI+L GLCREG +E+ L +  
Sbjct: 561 ESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFN 620

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
                G  ++  +Y I+++  C++  LE A +L+  M  +   P   T N ++  L KAG
Sbjct: 621 TWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAG 680

Query: 464 MAEDAAIALFGLVEMG 479
             E+A        E G
Sbjct: 681 RTEEAEKLALKFAEKG 696



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 48/259 (18%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI  + K    + A ++ +EMK++ +    +ITY+T+I GLC +G+  +A++   E+
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKETGI-VATIITYNTIIRGLCLSGKTDQAVDKLNEL 552

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K  ++PD  T N++I G+C  G V++A +    M  +   P++F    L+ G C+EG 
Sbjct: 553 LEKG-LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGM 611

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L++   +F+   +     DT+ Y  +I+ FC+  R+++A +L+ EM+ +  + D  T+N 
Sbjct: 612 LEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNA 671

Query: 385 ILGGL----------------------------------------------CREGKIEEA 398
           I+ GL                                              C +GK ++A
Sbjct: 672 IVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDA 731

Query: 399 LGMLEKLWYDGIYLNKASY 417
           + + ++    G+ LNK +Y
Sbjct: 732 MKLFQQAEQKGVSLNKYTY 750



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 47/148 (31%)

Query: 199 KP-NTCIFNILIKHHCKRGTLESAFEVLKEMK---------------------------- 229
           KP +T  +NI+I   CK   LE AF+++ EM+                            
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAE 686

Query: 230 -------------KSQMSYPNLIT----YSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
                        K+Q + P L T    YS  I  LC  G++++A++LF++   K   L 
Sbjct: 687 KLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSL- 745

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           +  TY  L+DG  +  K      ++ FM
Sbjct: 746 NKYTYIKLMDGLLKRRKSFTTTSLLPFM 773


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 30/444 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KGF  + +TY+ ++  L    K E    + ++M           +  L+  F    L E
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFN 206
           +   +F ++  +    P++   +  ++  +++ QV  A + F +  +   R  PN   + 
Sbjct: 341 QAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR--PNDVTYG 397

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMS---------------YPNLITYSTLIDGLCKN 251
            L+   CK G +  AFEV  ++  +  S                PN++TY  L+DGLCK 
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +   A EL + M+S     P+ + Y+ LIDGFC+ GK+D A+++   M   G  P+V  
Sbjct: 458 HKVDHAHELLDAMLSSG-CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 516

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT+L++   K+G+L  A +V  +M      P+ + YT +I+  CR G  ++AL+LL  M+
Sbjct: 517 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 576

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+GC  ++VT+  ++ GL + GKI+ +L +  ++   G   N  +YR+++N  C  G L+
Sbjct: 577 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE----MGFKPESDSW 487
           KA  LL  M  + + P Y          C       + IA  G++E     G  P +  +
Sbjct: 637 KARLLLGEMK-QTYWPKYLQGYR-----CAIQGFSKSFIASLGILEEMESYGTVPIAPVY 690

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
            +L++   +  +L  A EL  E++
Sbjct: 691 GMLIDCFSKAGRLEIAMELHKEMM 714



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 206/437 (47%), Gaps = 28/437 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G +    TY  ++    + K+    + +  +M    C+ ++  +  L+          + 
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 150 LEMFHKIHPITREK---------------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            E++ K+   +                  P++      ++ L ++++VD A   L  +  
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD-AML 471

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
               +PN  +++ LI   CK G ++SA EV  +M K     P++ TY++LID + K+GR 
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY-LPSVHTYTSLIDRMFKDGRL 530

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A+++  +M+ KD   P+ +TY  +IDG CR G+ ++A K++  M+  GC+PNV  YT 
Sbjct: 531 DLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G  K GK+  + ++F +M      P+ + Y  LIN  C AG +D+A  LL EMK+  
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 649

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
               +  +   + G  +      +LG+LE++   G       Y ++++   + G LE A+
Sbjct: 650 WPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 707

Query: 435 ELLRLMLCRGFLPHYATSN-----ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           EL + M+    +P    ++      L+  LC A   E+A      +   GF PE   +  
Sbjct: 708 ELHKEMM---EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVC 764

Query: 490 LVELICRGRKLLFAFEL 506
           L++ +   +K   A +L
Sbjct: 765 LIKGLVEVKKWDEALQL 781



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 206/449 (45%), Gaps = 62/449 (13%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY T+L    + K+      ++  M  E C  +  +F +L+  + N    E+     
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCN----EKDYAYA 196

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +K+         L  ++TC                           P   ++NI I   C
Sbjct: 197 YKL---------LNRMTTC------------------------GCPPGYVVYNIFIGSIC 223

Query: 214 KRGTLES------AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            +  L S      A ++  EM  +     N +  +     LC  G+F +A +L +EM+ K
Sbjct: 224 GQEKLPSPDLLDLAEKIYGEMLAANCVL-NKVNVANFARCLCGVGKFDKAFQLIKEMMRK 282

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              +PD  TY+ +I   C   KV++A  + + MK  G  P+V+ YT L++ FCK G +++
Sbjct: 283 G-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 341

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+ +F+EM++    P  + YT LI+ + +A +V +A ++   M + GC+ + VT+  ++ 
Sbjct: 342 AQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVD 401

Query: 388 GLCREGKIEEALGMLEKL----------WY------DGIYLNKASYRIVLNFSCQKGELE 431
           GLC+ G I +A  +  KL          +Y        +  N  +Y  +++  C+  +++
Sbjct: 402 GLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVD 461

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A ELL  ML  G  P++   + L+   CKAG  + A      + + G+ P   ++  L+
Sbjct: 462 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521

Query: 492 ELICRGRKLLFAFELLDELVIKESGTIQV 520
           + + +  +L  A ++L ++ +K+S T  V
Sbjct: 522 DRMFKDGRLDLAMKVLSQM-LKDSCTPNV 549



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 155/318 (48%), Gaps = 11/318 (3%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N L++     G ++  F V KEM +S     +  T       LCK GR+ +A+
Sbjct: 37  RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCM-DRFTVGCFAHALCKEGRWADAL 95

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +    M+ ++    D +    +I G       D A   +  M+ N C PNV  Y TL++G
Sbjct: 96  D----MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           F K+ +L   K + + M      P+   + +L++ +C       A +LL  M   GC   
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 379 IVTFNIILGGLCREGKI--EEALGMLEKLWYDGIYLNKASYRI-VLNFS---CQKGELEK 432
            V +NI +G +C + K+   + L + EK++ + +  N    ++ V NF+   C  G+ +K
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A +L++ M+ +GF+P  +T ++++  LC A   E A +    +  +G  P+  ++ +L++
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 493 LICRGRKLLFAFELLDEL 510
             C+   +  A  L +E+
Sbjct: 332 SFCKAGLIEQAQWLFEEM 349



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 43/354 (12%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++D L +  K +    +L  M    C+ +  ++  L+  F      +   E+F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKH 211
            ++       PS+   ++ ++ + +  ++DLA   L   +Q L+    PN   +  +I  
Sbjct: 503 LQMTKCGY-LPSVHTYTSLIDRMFKDGRLDLAMKVL---SQMLKDSCTPNVVTYTAMIDG 558

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C+ G  E A ++L  M++   S PN++TY+ LIDGL K G+   +++LF +M S+    
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCS-PNVVTYTALIDGLGKAGKIDLSLDLFTQM-SRKGCS 616

Query: 272 PDALTYNVLIDGFCRGGKVDRAK---------------------------------KIME 298
           P+ +TY VLI+  C  G +D+A+                                  I+E
Sbjct: 617 PNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILE 676

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF--LLKPDTIGYTTLINCFCR 356
            M++ G  P    Y  L++ F K G+L+ A E+  EM      +K D   Y +LI   C 
Sbjct: 677 EMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCL 736

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           A +V+EA  L  EM  RG   ++  F  ++ GL    K +EAL +   + ++G+
Sbjct: 737 ASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 158/372 (42%), Gaps = 53/372 (14%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L+E++  D A +FL       R++ N+CI N++        TL S F     +KK Q+ +
Sbjct: 117 LMEASYFDEAMSFLH------RMRCNSCIPNVVTYR-----TLLSGF-----LKKKQLGW 160

Query: 236 --------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
                         PN   +++L+   C    +  A +L   M +     P  + YN+ I
Sbjct: 161 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG-CPPGYVVYNIFI 219

Query: 282 DGFCRGGKV------DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
              C   K+      D A+KI   M    C  N  N        C  GK  +A ++  EM
Sbjct: 220 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PDT  Y+ +I   C A +V++A  L +EMK  G   D+ T+ I++   C+ G I
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 339

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           E+A  + E++   G      +Y  +++   +  ++ +A ++   M+  G  P+  T   L
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 399

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESD----------------SWALLVELICRGRK 499
           +  LCKAG    A      L+      +SD                ++  LV+ +C+  K
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459

Query: 500 LLFAFELLDELV 511
           +  A ELLD ++
Sbjct: 460 VDHAHELLDAML 471



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 3/186 (1%)

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A +  D +K+F  +P  + Y  L+     AG+VD    + KEM E G   D  T    
Sbjct: 22  HAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCF 81

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
              LC+EG+  +AL M+E+   +   L+      +++   +    ++A+  L  M C   
Sbjct: 82  AHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSC 138

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           +P+  T   LL    K          +  ++  G  P    +  LV   C  +   +A++
Sbjct: 139 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYK 198

Query: 506 LLDELV 511
           LL+ + 
Sbjct: 199 LLNRMT 204


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 224/453 (49%), Gaps = 20/453 (4%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C K P  AL  F  ++ + G + +  T+ T+L  L    +      +  QM   TC+ + 
Sbjct: 127 CSKLP-FALSTFGKIT-KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNF 188
             F  LM          R++E    +  +  +  +P+     T ++ + +      A N 
Sbjct: 185 VTFTTLMNGLCR---EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+   +   + PN  I++ +I   CK G    A  +  EM++  + +P+L TY+++I G 
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGF 300

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C +GR+ +A +L +EM+ + +I PD +TYN LI+ F + GK   A+++ + M   G  PN
Sbjct: 301 CSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
              Y+++++GFCK+ +L  A+ +F  M      P+ I + TLI+ +C A R+D+ +ELL 
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM E G  AD  T+N ++ G    G +  AL +L+++   G+  +  +   +L+  C  G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 429 ELEKAIELLRLML-----------CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
           +L+ A+E+ ++M              G  P   T N L+  L   G   +A      +  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P++ +++ +++ +C+  +L  A ++ D +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 53/461 (11%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  ++  + R ++ + V ++ ++M  +  +     F  L+K F +CS     L  F KI 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    P +   +T L+ L   ++V  A N L +       +PN   F  L+   C+ G 
Sbjct: 142 KLGLH-PDVVTFNTLLHGLCVEDRVSEALN-LFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDG------------------------------ 247
           +  A  +L  M +  +  P  ITY T++DG                              
Sbjct: 200 IVEAVALLDRMMEDGLQ-PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258

Query: 248 ------LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                 LCK+GR  +A  LF EM  K  I PD  TYN +I GFC  G+   A+++++ M 
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
               +P+V  Y  L+N F KEGK  EA+E++DEM    + P+TI Y+++I+ FC+  R+D
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  +   M  +GC  +++TFN ++ G C   +I++ + +L ++   G+  +  +Y  ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM--- 478
           +     G+L  A++LL+ M+  G  P   T + LL  LC  G  +D A+ +F +++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD-ALEMFKVMQKSKK 496

Query: 479 ---------GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                    G +P+  ++ +L+  +    K L A EL +E+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 177/359 (49%), Gaps = 48/359 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY++++D   +  + +A + +   M  + C                      
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--------------------- 392

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P+L   +T ++    + ++D     L +      L  +T  +N L
Sbjct: 393 ---------------PNLITFNTLIDGYCGAKRIDDGMELL-HEMTETGLVADTTTYNTL 436

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I      G L +A ++L+EM  S +  P+++T  TL+DGLC NG+ ++A+E+F+ M    
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 269 QIL----------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           + L          PD  TYN+LI G    GK   A+++ E M + G  P+   Y+++++G
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ +L EA ++FD M +    P+ + +TTLIN +C+AGRVD+ LEL  EM  RG  A+
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +T+  ++ G  + G I  AL + +++   G+Y +  + R +L     K EL++A+ +L
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 168/317 (52%), Gaps = 3/317 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P+   FN L+   C    +  A  +  +M ++    PN++T++TL++GLC+ GR  
Sbjct: 143 LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIV 201

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + M+ +D + P  +TY  ++DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 202 EAVALLDRMM-EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++  CK+G+  +A+ +F EM+   + PD   Y ++I  FC +GR  +A +LL+EM ER 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+VT+N ++    +EGK  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +  LM  +G  P+  T N L+   C A   +D    L  + E G   ++ ++  L+   
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 495 CRGRKLLFAFELLDELV 511
                L  A +LL E++
Sbjct: 441 YLVGDLNAALDLLQEMI 457



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 158/307 (51%), Gaps = 14/307 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    S+ ++   + N++D A++   Y        PN   FN LI  +C    ++   E
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF-YLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM ++ +   +  TY+TLI G    G    A++L +EM+S   + PD +T + L+DG
Sbjct: 417 LLHEMTETGL-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDG 474

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L++G   EGK  EA+E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +    ++VTF  ++ G C+ 
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G++++ L +  ++   GI  N  +Y  ++    + G +  A+++ + M+  G  P   T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 453 NELLVRL 459
             +L  L
Sbjct: 655 RNMLTGL 661



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 205/447 (45%), Gaps = 37/447 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  +  +  + +   AL +   + E      N   Y+ I+D L +  +      +  
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 120 QMTYETCKFHEGIFLNLMKHFS---------NCSLHERVL-EMFHKIHPITREKPSLKAI 169
           +M        +GIF +L  + S           S  E++L EM  +     +  P +   
Sbjct: 280 EMQ------EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-----KISPDVVTY 328

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           +  +N  ++  +   A+    Y     R + PNT  ++ +I   CK+  L++A  +   M
Sbjct: 329 NALINAFVKEGKFFEAEEL--YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
                S PNLIT++TLIDG C   R  + +EL  EM ++  ++ D  TYN LI GF   G
Sbjct: 387 ATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEM-TETGLVADTTTYNTLIHGFYLVG 444

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL--------- 339
            ++ A  +++ M ++G  P++    TL++G C  GKL++A E+F  M+            
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 340 --LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             ++PD   Y  LI+     G+  EA EL +EM  RG   D +T++ ++ GLC++ +++E
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  M + +       N  ++  ++N  C+ G ++  +EL   M  RG + +  T   L+ 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPES 484
              K G    A      ++  G  P++
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 2/259 (0%)

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +AI+LF +M+ + + LP  + +  L+    R  + D    + + M+      +++++T
Sbjct: 60  LEDAIDLFSDML-RSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+  FC   KL  A   F ++    L PD + + TL++  C   RV EAL L  +M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            C+ ++VTF  ++ GLCREG+I EA+ +L+++  DG+   + +Y  +++  C+KG+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 434 IELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + LLR M      +P+    + ++  LCK G   DA      + E G  P+  ++  ++ 
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 493 LICRGRKLLFAFELLDELV 511
             C   +   A +LL E++
Sbjct: 299 GFCSSGRWSDAEQLLQEML 317



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 93/196 (47%)

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L +GF +   L++A ++F +M      P  + +  L+    R  R D  + L ++M+ + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + DI +F I++   C   K+  AL    K+   G++ +  ++  +L+  C +  + +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L   M      P+  T   L+  LC+ G   +A   L  ++E G +P   ++  +V+ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 495 CRGRKLLFAFELLDEL 510
           C+    + A  LL ++
Sbjct: 230 CKKGDTVSALNLLRKM 245


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 173/304 (56%), Gaps = 7/304 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK---RGTLE 219
           +P++   +  +N L ++ +++ A++ ++   +     PN   +N LI  +CK    G + 
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVME-DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  VLKEM ++ +S PNL T++ LIDG  K+     ++++F+EM+ +D + P+ ++YN 
Sbjct: 279 KADAVLKEMVENDVS-PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD-VKPNVISYNS 336

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI+G C GGK+  A  + + M + G  PN+  Y  L+NGFCK   L+EA ++F  +K   
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             P T  Y  LI+ +C+ G++D+   L +EM+  G   D+ T+N ++ GLCR G IE A 
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            + ++L   G+  +  ++ I++   C+KGE  KA  LL+ M   G  P + T N ++   
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515

Query: 460 CKAG 463
           CK G
Sbjct: 516 CKEG 519



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 174/303 (57%), Gaps = 6/303 (1%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK---NGR 253
           +++PN   FN++I   CK G +  A +V+++MK    S PN+++Y+TLIDG CK   NG+
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCS-PNVVSYNTLIDGYCKLGGNGK 276

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A  + +EMV  D + P+  T+N+LIDGF +   +  + K+ + M +    PNV +Y 
Sbjct: 277 MYKADAVLKEMVEND-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +L+NG C  GK+ EA  + D+M +  ++P+ I Y  LIN FC+   + EAL++   +K +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G       +N+++   C+ GKI++   + E++  +GI  +  +Y  ++   C+ G +E A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            +L   +  +G LP   T + L+   C+ G +  AA+ L  + +MG KP   ++ ++++ 
Sbjct: 456 KKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514

Query: 494 ICR 496
            C+
Sbjct: 515 YCK 517



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 154/279 (55%), Gaps = 4/279 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KPN   +N LI   C  G +  A  +  +M  + +  PNLITY+ LI+G CKN   +EA
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ-PNLITYNALINGFCKNDMLKEA 385

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +++F  +  +  + P    YN+LID +C+ GK+D    + E M+  G  P+V  Y  L+ 
Sbjct: 386 LDMFGSVKGQGAV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+ G ++ AK++FD++ +  L PD + +  L+  +CR G   +A  LLKEM + G K 
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDG-IYLNKASYRIVLNFSCQKGELEKAIEL 436
             +T+NI++ G C+EG ++ A  M  ++  +  + +N ASY ++L    QKG+LE A  L
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           L  ML +G +P+  T   +   +   G   D    LF +
Sbjct: 564 LNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNV 602



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 169/317 (53%), Gaps = 7/317 (2%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIE 259
           N+ I ++L+  +      E  FE  K  +     Y  + ++   L+  L K  R  +   
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFK--RSGYYGYKLSALSCKPLMIALLKENRSADVEY 209

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +++EM+ + +I P+  T+NV+I+  C+ GK+++A+ +ME MK  GC+PNV +Y TL++G+
Sbjct: 210 VYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268

Query: 320 CK---EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           CK    GK+ +A  V  EM    + P+   +  LI+ F +   +  ++++ KEM ++  K
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +++++N ++ GLC  GKI EA+ M +K+   G+  N  +Y  ++N  C+   L++A+++
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +  +G +P     N L+   CK G  +D       +   G  P+  ++  L+  +CR
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 497 GRKLLFAFELLDELVIK 513
              +  A +L D+L  K
Sbjct: 449 NGNIEAAKKLFDQLTSK 465



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 158/290 (54%), Gaps = 6/290 (2%)

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V KEM + ++  PN+ T++ +I+ LCK G+  +A ++ E+M       P+ ++YN LIDG
Sbjct: 210 VYKEMIRRKIQ-PNVFTFNVVINALCKTGKMNKARDVMEDMKVYG-CSPNVVSYNTLIDG 267

Query: 284 FCR---GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           +C+    GK+ +A  +++ M  N  +PN+  +  L++GF K+  L  + +VF EM +  +
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           KP+ I Y +LIN  C  G++ EA+ +  +M   G + +++T+N ++ G C+   ++EAL 
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           M   +   G       Y ++++  C+ G+++    L   M   G +P   T N L+  LC
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           + G  E AA  LF  +     P+  ++ +L+E  CR  +   A  LL E+
Sbjct: 448 RNGNIE-AAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEM 496



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/365 (20%), Positives = 169/365 (46%), Gaps = 50/365 (13%)

Query: 198 LKPNTCI--FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L P+ C+  ++ L+K+     +LE  F++L  +  ++  Y  + ++   +DG  +NG   
Sbjct: 79  LDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAK-RYSKIRSF---LDGFVRNGSDH 134

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +   +F  +   D +  +++  ++L+  +    + +   +  +     G   +  +   L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M    KE +  + + V+ EM    ++P+   +  +IN  C+ G++++A +++++MK  GC
Sbjct: 195 MIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254

Query: 376 KADIVTFNIILGGLCR---EGKIEEALGMLEKL-------------------WYD----- 408
             ++V++N ++ G C+    GK+ +A  +L+++                   W D     
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314

Query: 409 -----------GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
                       +  N  SY  ++N  C  G++ +AI +   M+  G  P+  T N L+ 
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374

Query: 458 RLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFELLDEL----VI 512
             CK  M ++ A+ +FG V+  G  P +  + +L++  C+  K+   F L +E+    ++
Sbjct: 375 GFCKNDMLKE-ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 513 KESGT 517
            + GT
Sbjct: 434 PDVGT 438



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 5/245 (2%)

Query: 36  NTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNN 95
           N  K    +   D  V A  +   I++ A I+        + AL++F +V  Q G     
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ-GAVPTT 401

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
             Y  ++D   +  K +   A+  +M  E      G +  L+         E   ++F +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +   ++  P L      +       +   A   LK  ++ + LKP    +NI++K +CK 
Sbjct: 462 L--TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSK-MGLKPRHLTYNIVMKGYCKE 518

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G L++A  +  +M+K +    N+ +Y+ L+ G  + G+  +A  L  EM+ K  ++P+ +
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG-LVPNRI 577

Query: 276 TYNVL 280
           TY ++
Sbjct: 578 TYEIV 582


>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Brachypodium distachyon]
          Length = 476

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 216/451 (47%), Gaps = 21/451 (4%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTV---SEQKGFNHNNATYATILDKLARYKKF 111
           K  + ++ G    L++ E++P+ AL +F+     S       +  T + +  +LA     
Sbjct: 10  KWPKTLTAGHLHRLVRAERDPRRALALFDAATAASVSAPILPSPDTVSLLTSRLASAGLL 69

Query: 112 EAVDAVLRQ--MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
               ++L +    + +    E  FL L++ FS        L++F           S ++ 
Sbjct: 70  PLATSLLSRSRALFPSAADLEPPFLTLLRAFSRTHRPLAALQLFRSAPSALALPHSARSY 129

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT--LESAFEVLKE 227
           +  L  L+  + + LA + L    +     P T  +N+L+K HC   +  +E A  + + 
Sbjct: 130 TAVLATLVSHSHLPLAHSLLA-DMRAGGFAPTTATYNVLLKAHCSDASAPIEDAVRLFRN 188

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           + K     P+  +Y+T+IDGLC+  R  +A E+F EMV+ + + P  +TY  +I+   R 
Sbjct: 189 IPK-----PDACSYNTVIDGLCRRSRRADAQEIFSEMVA-NGVAPTVVTYTTVINWLARD 242

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G +D A K+ + M   G  PNV  Y++L++G CK G+   A E+ D M      P+TI Y
Sbjct: 243 GCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKEAKLPNTITY 302

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           +++IN  C+  R++EA+E+L  M+ +G K D   F  ++ GLC  G+  EA   L+++  
Sbjct: 303 SSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVGLCGAGRAVEAANYLDEMVL 362

Query: 408 DGIYLNKASYRI-------VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
            G+  N+ ++ +       V+   C KGE  +   + + M  RG      T + L+    
Sbjct: 363 SGVEPNRVTWSLHVRINDAVVTALCAKGEAGRTFRVYQSMRTRGISTEPGTFHLLVEFFS 422

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           K    E AA  +  ++     PE ++W +++
Sbjct: 423 KKNDLEKAAHVVLDMLSEKCIPERETWDIIL 453



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 161/335 (48%), Gaps = 12/335 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC----IFNILIKHHCKRGTLE 219
           PS   +S   + L  +  + LA + L  S     L P+       F  L++   +     
Sbjct: 51  PSPDTVSLLTSRLASAGLLPLATSLLSRSRA---LFPSAADLEPPFLTLLRAFSRTHRPL 107

Query: 220 SAFEVLKEMKKSQMSYPNLI-TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           +A ++ +    S ++ P+   +Y+ ++  L  +     A  L  +M +     P   TYN
Sbjct: 108 AALQLFRS-APSALALPHSARSYTAVLATLVSHSHLPLAHSLLADMRAGG-FAPTTATYN 165

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           VL+   C          +  F   N   P+  +Y T+++G C+  +  +A+E+F EM   
Sbjct: 166 VLLKAHCSDASAPIEDAVRLF--RNIPKPDACSYNTVIDGLCRRSRRADAQEIFSEMVAN 223

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            + P  + YTT+IN   R G +D+AL++  EM   G   ++VT++ ++ GLC+ G+   A
Sbjct: 224 GVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASA 283

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           L +L+++  +    N  +Y  V+N  C++  L +A+E+L  M  +G  P      +L+V 
Sbjct: 284 LELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVG 343

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           LC AG A +AA  L  +V  G +P   +W+L V +
Sbjct: 344 LCGAGRAVEAANYLDEMVLSGVEPNRVTWSLHVRI 378



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 7/316 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL-ITYSTLIDGLCKNGRFREAI 258
           P+    ++L       G L  A  +L   +    S  +L   + TL+    +  R   A+
Sbjct: 51  PSPDTVSLLTSRLASAGLLPLATSLLSRSRALFPSAADLEPPFLTLLRAFSRTHRPLAAL 110

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF    S   +   A +Y  ++        +  A  ++  M+  G  P    Y  L+  
Sbjct: 111 QLFRSAPSALALPHSARSYTAVLATLVSHSHLPLAHSLLADMRAGGFAPTTATYNVLLKA 170

Query: 319 FCKEGK--LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            C +    +++A  +F  +     KPD   Y T+I+  CR  R  +A E+  EM   G  
Sbjct: 171 HCSDASAPIEDAVRLFRNIP----KPDACSYNTVIDGLCRRSRRADAQEIFSEMVANGVA 226

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             +VT+  ++  L R+G +++AL M +++   GI  N  +Y  +++  C+ G    A+EL
Sbjct: 227 PTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASALEL 286

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M     LP+  T + ++  LCK     +A   L  +   G KP++  +  L+  +C 
Sbjct: 287 LDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVGLCG 346

Query: 497 GRKLLFAFELLDELVI 512
             + + A   LDE+V+
Sbjct: 347 AGRAVEAANYLDEMVL 362


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 189/369 (51%), Gaps = 41/369 (11%)

Query: 190 KYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           KY ++ L   L PN  ++ +LI  H K G L  A  + + +    +  P++ T S  I G
Sbjct: 475 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV-LPDVQTCSAFIHG 533

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L KNGR +EA+++F E+  K  ++PD  TY+ LI GFC+ G+V++A ++ + M   G  P
Sbjct: 534 LLKNGRVQEALKVFSELKEKG-LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 592

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N+F Y  L++G CK G +Q A+++FD M    L+PD++ Y+T+I+ +C++  V EA  L 
Sbjct: 593 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 652

Query: 368 KEMKERG---------------CK-------------------ADIVTFNIILGGLCREG 393
            EM  +G               CK                   A  ++FN ++ G C+  
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 712

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           KI+EA  + +++    I  +  +Y  V+++ C+ G++E+A  L + M  R  +    T  
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            L+    K G + +       +V  G KP+  ++ L++   C+   L+ AF+L DE+V K
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832

Query: 514 ---ESGTIQ 519
                GTI 
Sbjct: 833 GMLTKGTIH 841



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 168/313 (53%), Gaps = 2/313 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N+LI   CK G +E A E+LK M  +    PN  T+  LI+G C+      A+EL
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCREHNMGRALEL 336

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM  K  ++P A++Y  +I+G C    +  A K++E M  +G  PNV  Y+TL+ G+ 
Sbjct: 337 LDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 395

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            EG+++EA+ + D M    + PD   Y  +I+C  +AG+++EA   L E++ RG K D V
Sbjct: 396 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 455

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TF   + G  + GK+ EA    +++   G+  N   Y +++N   + G L +A+ + R +
Sbjct: 456 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 515

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G LP   T +  +  L K G  ++A      L E G  P+  +++ L+   C+  ++
Sbjct: 516 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 575

Query: 501 LFAFELLDELVIK 513
             AFEL DE+ +K
Sbjct: 576 EKAFELHDEMCLK 588



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 238/545 (43%), Gaps = 72/545 (13%)

Query: 14  FSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEK 73
           +SS S   S L W         N   + P V   D  +D+ KR   +   A +  +    
Sbjct: 135 YSSSSILDSVLFWFR-------NYGGSSPVV--FDILIDSYKRMGMLDEAANVFFVAKND 185

Query: 74  EPQCALEIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
               +L   N++    +KG   N  TY  I   L R K+         +M     K    
Sbjct: 186 SILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK---- 241

Query: 132 IFLNLMKHFSNCSLHERVLEMFHK---IHPITREKPSLKAISTCLNL---------LIES 179
                   ++ CS    +++ F +   I  + R K  + +    +NL         L + 
Sbjct: 242 ------PDYNACS---ALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKF 292

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-----SQMS 234
            +++ A   LK     L  KPN+  F +LI+ +C+   +  A E+L EM+K     S +S
Sbjct: 293 GKMEKAAEILK-GMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351

Query: 235 Y-----------------------------PNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           Y                             PN++ YSTLI G    GR  EA  L + M 
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM- 410

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           S   + PD   YN +I    + GK++ A   +  ++  G  P+   +   + G+ K GK+
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA + FDEM +  L P+   YT LIN   +AG + EAL + + +   G   D+ T +  
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GL + G+++EAL +  +L   G+  +  +Y  +++  C++GE+EKA EL   M  +G 
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+    N L+  LCK+G  + A     G+ E G +P+S +++ +++  C+   +  AF 
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650

Query: 506 LLDEL 510
           L  E+
Sbjct: 651 LFHEM 655



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+ + + E++    +  +Y  +++ L   K     + +L +MT+   K +  ++  L+
Sbjct: 333 ALELLDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 391

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             +++    E    +   +   +   P +   +  ++ L ++ +++ A  +L    Q   
Sbjct: 392 MGYASEGRIEEARRLLDGM-SCSGVAPDIFCYNAIISCLSKAGKMEEASTYL-LEIQGRG 449

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+   F   I  + K G +  A +   EM    +  PN   Y+ LI+G  K G   EA
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL-MPNNPLYTVLINGHFKAGNLMEA 508

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + +F  + +   +LPD  T +  I G  + G+V  A K+   +K  G  P+VF Y++L++
Sbjct: 509 LSIFRHLHALG-VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 567

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK+G++++A E+ DEM    + P+   Y  L++  C++G +  A +L   M E+G + 
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 627

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT++ ++ G C+   + EA  +  ++   G+  +   Y  +++  C++G++EKA+ L 
Sbjct: 628 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 687

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R ML +GF    +  N L+   CK+   ++A+     ++     P+  ++  +++  C+ 
Sbjct: 688 REMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 746

Query: 498 RKLLFAFELLDEL 510
            K+  A  L  E+
Sbjct: 747 GKMEEANLLFKEM 759



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 205/430 (47%), Gaps = 8/430 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE-- 147
           G   N  TY  ++  L ++ K E    +L+ M    CK +   F  L++ +  C  H   
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGY--CREHNMG 331

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R LE+  ++       PS  +    +N L     + LA   L+       LKPN  +++ 
Sbjct: 332 RALELLDEMEK-RNLVPSAVSYGAMINGLCHCKDLSLANKLLE-KMTFSGLKPNVVVYST 389

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +   G +E A  +L  M  S ++ P++  Y+ +I  L K G+  EA     E+  +
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVA-PDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 448

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PDA+T+   I G+ + GK+  A K  + M ++G  PN   YT L+NG  K G L E
Sbjct: 449 G-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 507

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F  +    + PD    +  I+   + GRV EAL++  E+KE+G   D+ T++ ++ 
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 567

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G C++G++E+A  + +++   GI  N   Y  +++  C+ G++++A +L   M  +G  P
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 627

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T + ++   CK+    +A      +   G +P S  +  LV   C+   +  A  L 
Sbjct: 628 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 687

Query: 508 DELVIKESGT 517
            E++ K   T
Sbjct: 688 REMLQKGFAT 697



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 194/378 (51%), Gaps = 18/378 (4%)

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
           HF   +L E  L +F  +H +    P ++  S  ++ L+++ +V  A        +   L
Sbjct: 499 HFKAGNLME-ALSIFRHLHALGV-LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK-GL 555

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   ++ LI   CK+G +E AFE+  EM    ++ PN+  Y+ L+DGLCK+G  + A 
Sbjct: 556 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA-PNIFIYNALVDGLCKSGDIQRAR 614

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF+ M  K  + PD++TY+ +IDG+C+   V  A  +   M + G  P+ F Y  L++G
Sbjct: 615 KLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673

Query: 319 FCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            CKEG +++A  +F EM  K F     T+ + TLI+ +C++ ++ EA +L +EM  +   
Sbjct: 674 CCKEGDMEKAMNLFREMLQKGF---ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D VT+  ++   C+ GK+EEA  + +++    + ++  +Y  ++    + G+  +   L
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL----VEMGFKPESDSWALLVE 492
              M+ +G  P   T   ++   CK    ED  +  F L    V  G   +     LL+ 
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCK----EDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 846

Query: 493 LICRGRKLLFAFELLDEL 510
            +C+   L  A +LLDE+
Sbjct: 847 ALCKREDLTEASKLLDEM 864



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 158/326 (48%), Gaps = 20/326 (6%)

Query: 204 IFNILIKHHCKRGTLESAFEV------------------LKEMKKSQMSYPNLITYSTLI 245
           +F+ILI  + + G L+ A  V                  L+ M +  +  PN  TY+ + 
Sbjct: 158 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGL-VPNTYTYTIIT 216

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
            GLC+  R  EA   FEEM  K  + PD    + LIDGF R G +D   +I + M + G 
Sbjct: 217 AGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGI 275

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
             N+  Y  L++G CK GK+++A E+   M     KP++  +  LI  +CR   +  ALE
Sbjct: 276 PINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALE 335

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           LL EM++R      V++  ++ GLC    +  A  +LEK+ + G+  N   Y  ++    
Sbjct: 336 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 395

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
            +G +E+A  LL  M C G  P     N ++  L KAG  E+A+  L  +   G KP++ 
Sbjct: 396 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 455

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           ++   +    +  K+  A +  DE++
Sbjct: 456 TFGAFILGYSKTGKMTEAAKYFDEML 481



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 155/294 (52%), Gaps = 3/294 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P++  ++ +I  +CK   +  AF +  EM  S+   P+   Y+ L+ G CK G   +A
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP-SKGVQPHSFVYNALVHGCCKEGDMEKA 683

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF EM+ K       L++N LIDG+C+  K+  A ++ + M      P+   YTT+++
Sbjct: 684 MNLFREMLQKG--FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK GK++EA  +F EM+   L  DT+ YT+L+  + + G+  E   L ++M  +G K 
Sbjct: 742 WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 801

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT+ +++   C+E  + EA  + +++   G+      + +++   C++ +L +A +LL
Sbjct: 802 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 861

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             M   G  P  A  + L+    +AG  ++A     G+  +G  P++ +   LV
Sbjct: 862 DEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 915



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 187/402 (46%), Gaps = 43/402 (10%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q AL++F+ + E KG   +  TY++++    +  + E    +  +M  +    +  I+  
Sbjct: 541 QEALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+         +R  ++F  + P    +P     ST ++   +S  V  A+ F  +    
Sbjct: 600 LVDGLCKSGDIQRARKLFDGM-PEKGLEPDSVTYSTMIDGYCKSENV--AEAFSLFHEMP 656

Query: 196 LR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            + ++P++ ++N L+   CK G +E A  + +EM   Q  +   ++++TLIDG CK+ + 
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML--QKGFATTLSFNTLIDGYCKSCKI 714

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           +EA +LF+EM++K QI+PD +TY  +ID  C+ GK++ A  + + M+      +   YT+
Sbjct: 715 QEASQLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 773

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY--------------------------- 347
           LM G+ K G+  E   +F++M    +KPD + Y                           
Sbjct: 774 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 833

Query: 348 --------TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
                     LI   C+   + EA +LL EM E G K  +   + ++      GK++EA 
Sbjct: 834 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEAT 893

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
            + E +   G+  +  +   ++N +    + E A  L++ ++
Sbjct: 894 RVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 144/316 (45%), Gaps = 35/316 (11%)

Query: 230 KSQMSYPNLI-TYSTLIDGLCKNGRFREAIELFEEMV----SKDQILPDAL--------- 275
           +SQM  P  + ++S L   LC +  F  A  +  +M+    S   IL   L         
Sbjct: 95  QSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGS 154

Query: 276 ---TYNVLIDGFCRGGKVDRAKKIMEFMKNNG-------CN-----------PNVFNYTT 314
               +++LID + R G +D A  +    KN+        CN           PN + YT 
Sbjct: 155 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTI 214

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +  G C+  ++ EAK  F+EM+   LKPD    + LI+ F R G +DE L +   M   G
Sbjct: 215 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 274

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +++T+N+++ GLC+ GK+E+A  +L+ +   G   N  ++ +++   C++  + +A+
Sbjct: 275 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ELL  M  R  +P   +   ++  LC       A   L  +   G KP    ++ L+   
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394

Query: 495 CRGRKLLFAFELLDEL 510
               ++  A  LLD +
Sbjct: 395 ASEGRIEEARRLLDGM 410


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 202/415 (48%), Gaps = 45/415 (10%)

Query: 148 RVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           +V +  H    + RE   +P+     T +N L +      A + L+   Q    KPNT  
Sbjct: 157 KVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG-STKPNTRT 215

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           + I+I   CK G L+ A  +L EMK+  +  P++ TYSTLID LCK  ++     LF EM
Sbjct: 216 YTIVIDAFCKDGMLDGATSLLNEMKQKSIP-PDIFTYSTLIDALCKLSQWENVRTLFLEM 274

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +  + I P+  T+N +IDG C+ GKV+ A++IM +M   G +P+V  Y  +++G+   G+
Sbjct: 275 IHLN-IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A+E+FD M N  ++PD I Y  LIN + R  ++DEA+++ +E+ ++G K  IVT N+
Sbjct: 334 VDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 385 -----------------------------------ILGGLCREGKIEEALGMLEKLWYDG 409
                                              +LGG  + G +EEA+    KL    
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
              N   Y  V++  C+ G+L+KA      +   G  P   T   ++   C+ G+ ++A 
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK----ESGTIQV 520
             L  + + G   ++ ++ ++V    R  K+      L+E+  K    E+ T+++
Sbjct: 514 DMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVEL 568



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 215/424 (50%), Gaps = 6/424 (1%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E + + A+ +F  +  +     N   Y T+++ L +    +    +LR M   + K +  
Sbjct: 155 ENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTR 214

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLK 190
            +  ++  F    + +    + +++   +   P +   ST ++ L + +Q +  +  FL+
Sbjct: 215 TYTIVIDAFCKDGMLDGATSLLNEMKQKSI-PPDIFTYSTLIDALCKLSQWENVRTLFLE 273

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
               HL + PN C FN +I   CK G +E A E+++ M +  +  P++ITY+ +IDG   
Sbjct: 274 MI--HLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD-PDVITYNMIIDGYGL 330

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G+   A E+F+ M++K  I PD ++YN+LI+G+ R  K+D A ++   +   G  P++ 
Sbjct: 331 RGQVDRAREIFDSMINK-SIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
               L++G  + G+ + A+  FDEM +    PD   + TL+  + + G V+EA+    ++
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           + R    +I  +  ++ GLC+ GK+++A    EKL   G++ +  +Y  +++  CQ+G L
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           ++A ++LR M   G L    T N ++    ++    +    L  +    F  E+ +  LL
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569

Query: 491 VELI 494
           +++I
Sbjct: 570 MDII 573



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 180/351 (51%), Gaps = 17/351 (4%)

Query: 137 MKHFSNCSLHERVLEMFHKIH----PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           MKH+S+      V+ +F +IH    P+     S+   S CL    +     LA +F K  
Sbjct: 85  MKHYSS------VVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKK-- 136

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
                +  N   F  LI+       ++ A  + K++ +  +  PN + Y T+++GLCK G
Sbjct: 137 ----GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKG 192

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
             ++A +L   ++ +    P+  TY ++ID FC+ G +D A  ++  MK     P++F Y
Sbjct: 193 HTQKAFDLLR-LMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           +TL++  CK  + +  + +F EM +  + P+   + ++I+  C+ G+V++A E+++ M E
Sbjct: 252 STLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G   D++T+N+I+ G    G+++ A  + + +    I  +  SY I++N   ++ ++++
Sbjct: 312 KGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDE 371

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           A+++ R +  +G  P   T N LL  L + G  + A      ++  G  P+
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPD 422



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 176/372 (47%), Gaps = 3/372 (0%)

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
           F A     R  +  TC         +   F N    +    +F ++   T+  PS+ + S
Sbjct: 18  FFAYSIAPRHYSTNTCSISVKGNFGVSNEFQNVKCLDDAFSLFRQM-VRTKPLPSVASFS 76

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
             L  ++         +  +  ++ LR+  +  I +I++   C     +  F VL    K
Sbjct: 77  KLLKAMVHMKHYSSVVSLFREIHK-LRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFK 135

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             + Y N +T++TLI GL    + ++A+ LF+++V ++   P+ + Y  +++G C+ G  
Sbjct: 136 KGIPY-NEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHT 194

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
            +A  ++  M+     PN   YT +++ FCK+G L  A  + +EMK   + PD   Y+TL
Sbjct: 195 QKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTL 254

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+  C+  + +    L  EM       ++ TFN ++ GLC+EGK+E+A  ++  +   G+
Sbjct: 255 IDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGV 314

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  +Y ++++    +G++++A E+   M+ +   P   + N L+    +    ++A  
Sbjct: 315 DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQ 374

Query: 471 ALFGLVEMGFKP 482
               + + G KP
Sbjct: 375 VCREISQKGLKP 386



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 185/361 (51%), Gaps = 16/361 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS--NCS 144
           +QK    +  TY+T++D L +  ++E V  +  +M       H  I+ N+    S  +  
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEM------IHLNIYPNVCTFNSVIDGL 293

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
             E  +E   +I     EK     + T  N++I+      QVD A+     S  +  ++P
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVIT-YNMIIDGYGLRGQVDRAREIFD-SMINKSIEP 351

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +NILI  + ++  ++ A +V +E+ +  +  P+++T + L+ GL + GR + A   
Sbjct: 352 DIISYNILINGYARQKKIDEAMQVCREISQKGLK-PSIVTCNVLLHGLFELGRTKSAQNF 410

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+EM+S   I PD  T+  L+ G+ + G V+ A      ++    + N+  YT +++G C
Sbjct: 411 FDEMLSAGHI-PDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC 469

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K GKL +A   F+++    L PD I YT +I+ +C+ G +DEA ++L++M++ GC AD  
Sbjct: 470 KNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNR 529

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N+I+ G  R  K+ E    LE++         A+  ++++   +   + + +  ++L 
Sbjct: 530 TYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSITRKMHWIKLH 589

Query: 441 L 441
           +
Sbjct: 590 I 590



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/297 (19%), Positives = 126/297 (42%), Gaps = 38/297 (12%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L+ AF + ++M +++   P++ ++S L+  +     +   + LF E + K +I       
Sbjct: 53  LDDAFSLFRQMVRTK-PLPSVASFSKLLKAMVHMKHYSSVVSLFRE-IHKLRIPVHEFIL 110

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           +++++  C   + D    ++      G   N   +TTL+ G   E K             
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENK------------- 157

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERGCKADIVTFNIILGGLCREGKIE 396
                                 V +A+ L K++ +E  C+ + V +  ++ GLC++G  +
Sbjct: 158 ----------------------VKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQ 195

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +A  +L  +       N  +Y IV++  C+ G L+ A  LL  M  +   P   T + L+
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             LCK    E+       ++ +   P   ++  +++ +C+  K+  A E++  ++ K
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK 312


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 188/379 (49%), Gaps = 40/379 (10%)

Query: 71  CEKEP-QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           C++ P   A+ +   +    G   +  +Y  +L  L   +++  V  ++ +M    C  +
Sbjct: 192 CDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPN 251

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
              F  L+ H     L ERV    H++H    E                           
Sbjct: 252 IVTFSTLIGHLCRNGLFERV----HEVHAQMAEH-------------------------- 281

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
                     P+  ++  +I   CK   LE A  +L  M    +S PN++ Y+TL+ GLC
Sbjct: 282 -------GCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLS-PNVVCYNTLLKGLC 333

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
              R+ EA  L  EM  KD  L D +T+N+L+D  C+ G VDR  +++E M  +GC P+V
Sbjct: 334 SADRWEEAEGLLAEMFDKDCPL-DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDV 392

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             YTT++NGFCKEG + EA  +   M     +P+T+ YT ++   C A R  +A EL+ +
Sbjct: 393 ITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQ 452

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M ++GC  + VTFN ++  LC++G +E+A+ +L+++  +G   +  SY  V++   + G 
Sbjct: 453 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGN 512

Query: 430 LEKAIELLRLMLCRGFLPH 448
            ++A+ELL +M+ +G  P+
Sbjct: 513 TDEALELLNVMVKKGMSPN 531



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 173/307 (56%), Gaps = 1/307 (0%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N++++  C +G ++ A  +L+++  S    P++++Y+ ++ GLC   R+    +L EEMV
Sbjct: 185 NLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMV 244

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +     P+ +T++ LI   CR G  +R  ++   M  +GC P+V  Y T+++G CKE +L
Sbjct: 245 AAG-CPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERL 303

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           + A+ + + M ++ L P+ + Y TL+   C A R +EA  LL EM ++ C  D VTFNI+
Sbjct: 304 EVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNIL 363

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +  LC+ G ++  + +LE++   G   +  +Y  V+N  C++G +++A+ LLR M   G 
Sbjct: 364 VDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC 423

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+  +   +L  LC A    DA   +  +++ G  P   ++  L+  +C+   +  A E
Sbjct: 424 RPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 483

Query: 506 LLDELVI 512
           LL ++++
Sbjct: 484 LLKQMLV 490



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 200/436 (45%), Gaps = 39/436 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL + + ++ ++G       Y   L+   R   F     VLR +    C    G      
Sbjct: 130 ALAVLDDMA-RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVG------ 182

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
               NC+L                           L  + +   VD A   L+       
Sbjct: 183 ----NCNL--------------------------VLQAVCDQGPVDEAVRLLRDLLPSFG 212

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +P+   +N +++  C         ++++EM  +    PN++T+STLI  LC+NG F   
Sbjct: 213 CEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCP-PNIVTFSTLIGHLCRNGLFERV 271

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+  +M ++    PD   Y  +IDG C+  +++ A+ I+  M + G +PNV  Y TL+ 
Sbjct: 272 HEVHAQM-AEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLK 330

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C   + +EA+ +  EM +     D + +  L++  C+ G VD  +E+L++M E GC  
Sbjct: 331 GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMP 390

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D++T+  ++ G C+EG I+EA+ +L  +   G   N  SY IVL   C       A EL+
Sbjct: 391 DVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELM 450

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+ +G  P+  T N L+  LCK G+ E A   L  ++  G  P+  S++ +++ + + 
Sbjct: 451 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 510

Query: 498 RKLLFAFELLDELVIK 513
                A ELL+ +V K
Sbjct: 511 GNTDEALELLNVMVKK 526



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 162/349 (46%), Gaps = 36/349 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR-- 255
           + PN   +  L++  C RG +  A  VL +M +   + P    Y   ++  C+   FR  
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCA-PTPPMYHVTLEAACRASGFRGA 165

Query: 256 ---------------------------------EAIELFEEMVSKDQILPDALTYNVLID 282
                                            EA+ L  +++      PD ++YN ++ 
Sbjct: 166 VGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLR 225

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C   +    + +ME M   GC PN+  ++TL+   C+ G  +   EV  +M      P
Sbjct: 226 GLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAP 285

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y T+I+  C+  R++ A  +L  M   G   ++V +N +L GLC   + EEA G+L
Sbjct: 286 DVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLL 345

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +++     L+  ++ I+++F CQ G +++ IE+L  ML  G +P   T   ++   CK 
Sbjct: 346 AEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKE 405

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G+ ++A + L  +   G +P + S+ ++++ +C   + + A EL+ +++
Sbjct: 406 GLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMI 454



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 183/353 (51%), Gaps = 12/353 (3%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER----VLEMF 153
           YATI+D + + ++ E    +L +M       +   +  L+K   +    E     + EMF
Sbjct: 290 YATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF 349

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            K  P+          +  ++ L ++  VD     L+   +H    P+   +  +I   C
Sbjct: 350 DKDCPLDD-----VTFNILVDFLCQNGLVDRVIEVLEQMLEH-GCMPDVITYTTVINGFC 403

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G ++ A  +L+ M       PN ++Y+ ++ GLC   R+ +A EL  +M+ +    P+
Sbjct: 404 KEGLIDEAVMLLRSMAACG-CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG-CPPN 461

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +T+N LI+  C+ G V++A ++++ M  NGC+P++ +Y+T+++G  K G   EA E+ +
Sbjct: 462 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLN 521

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M    + P+TI Y+++ +     GR+++ +++ + +++   ++D V +N ++  LC+ G
Sbjct: 522 VMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRG 581

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           + + A+  L  +   G   N+++Y I++     +G +++A E+L  +  +G L
Sbjct: 582 ETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 8/270 (2%)

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S LI  LC  GR  EA                 + YN ++ G+CR G++  A+++   + 
Sbjct: 51  SALIRSLCAAGRTAEAARALSAAGGGAG----VVAYNAMVAGYCRAGQLAAARRLAASVP 106

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                PN + Y  L+   C  G++ +A  V D+M      P    Y   +   CRA    
Sbjct: 107 ---VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR 163

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD-GIYLNKASYRIV 420
            A+ +L+++  RGC  D+   N++L  +C +G ++EA+ +L  L    G   +  SY  V
Sbjct: 164 GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAV 223

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           L   C         +L+  M+  G  P+  T + L+  LC+ G+ E        + E G 
Sbjct: 224 LRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGC 283

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDEL 510
            P+   +A +++ +C+  +L  A  +L+ +
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRM 313



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 5/275 (1%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ ++ G C+ G+   A  L   +     + P+A TY  L+   C  G++  A  +++ M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASV----PVAPNAYTYFPLVRALCARGRIADALAVLDDM 137

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              GC P    Y   +   C+    + A  V  ++       D      ++   C  G V
Sbjct: 138 ARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPV 197

Query: 361 DEALELLKEM-KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           DEA+ LL+++    GC+ D+V++N +L GLC   +      ++E++   G   N  ++  
Sbjct: 198 DEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFST 257

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C+ G  E+  E+   M   G  P       ++  +CK    E A   L  +   G
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             P    +  L++ +C   +   A  LL E+  K+
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD 352



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 3/183 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   N  T+ T+++ L +    E    +L+QM    C      +  ++         +
Sbjct: 455 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTD 514

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             LE+ + +        ++   S    L  E     + Q F    +  +R   +  ++N 
Sbjct: 515 EALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVR--SDAVLYNA 572

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CKRG  + A E L  M  S    PN  TY+ LI GL   G  +EA E+  E+ SK
Sbjct: 573 VISSLCKRGETDRAIEFLAYMVSSG-CVPNESTYTILIRGLASEGFVKEAQEILTELCSK 631

Query: 268 DQI 270
             +
Sbjct: 632 GAL 634


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 168/308 (54%), Gaps = 3/308 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI   CK G    A ++L++M++  +  PNLITYST+IDGLCK+    +A+ LF  +
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEED-LVRPNLITYSTVIDGLCKDRLIADALRLFS-L 220

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V+   IL D + YN LI G C  G+   A +++  M     NP+ + +  L++  CKEG+
Sbjct: 221 VTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGR 280

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA+ VF  M     KPD + Y  L+  FC +  V EA EL   M +RG + D++ +N+
Sbjct: 281 IVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNV 340

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+   ++EA+ + +++    +  N A+Y  +++  C+ G +    EL+  M  RG
Sbjct: 341 LINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N  L   CK+   E  AI+LF  +  G  P+   + ++VE  C+G KL  A 
Sbjct: 401 QSPDIVTYNIFLDAFCKSKPYE-KAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAE 459

Query: 505 ELLDELVI 512
           E L  L+I
Sbjct: 460 EALQHLLI 467



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 129/249 (51%), Gaps = 12/249 (4%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLE 219
           EKP +   +  +     SN V  A+      N+ ++  L+P+   +N+LI  +CK   ++
Sbjct: 296 EKPDIVTYNALMEGFCLSNNVSEARELF---NRMVKRGLEPDVLNYNVLINGYCKIDMVD 352

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  + KE++   +  PNL TY++LIDGLCK GR     EL +EM  + Q  PD +TYN+
Sbjct: 353 EAMVLFKEIRCKNL-VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS-PDIVTYNI 410

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
            +D FC+    ++A  +   +   G  P+ + Y  ++  FCK  KL+ A+E    +    
Sbjct: 411 FLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHG 469

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA- 398
             P+   YT +IN  C+    DEA+ LL +M +  C  D VTF  I+G L    + ++A 
Sbjct: 470 CCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAE 529

Query: 399 ---LGMLEK 404
              L M+E+
Sbjct: 530 KLRLEMIER 538



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 139/283 (49%), Gaps = 36/283 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   FNIL+   CK G +  A  V   M K +   P+++TY+ L++G C +    EA
Sbjct: 261 INPDDYTFNILVDALCKEGRIVEAQGVFAVMMK-RGEKPDIVTYNALMEGFCLSNNVSEA 319

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF  MV K  + PD L YNVLI+G+C+   VD A  + + ++     PN+  Y +L++
Sbjct: 320 RELFNRMV-KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLID 378

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE----- 372
           G CK G++   +E+ DEM +    PD + Y   ++ FC++   ++A+ L +++ +     
Sbjct: 379 GLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPD 438

Query: 373 -----------------------------RGCKADIVTFNIILGGLCREGKIEEALGMLE 403
                                         GC  ++ T+ I++  LC++   +EA+ +L 
Sbjct: 439 FYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLS 498

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           K+  +    +  ++  ++    ++ E +KA +L   M+ RG +
Sbjct: 499 KMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 11/298 (3%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           T+  +   N ++ T+  ++D L +  +      V   M     K     +  LM+ F   
Sbjct: 254 TMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLS 313

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---P 200
           +      E+F+++     E P +   +  +N   + + VD A    K     +R K   P
Sbjct: 314 NNVSEARELFNRMVKRGLE-PDVLNYNVLINGYCKIDMVDEAMVLFK----EIRCKNLVP 368

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N LI   CK G +    E++ EM     S P+++TY+  +D  CK+  + +AI L
Sbjct: 369 NLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS-PDIVTYNIFLDAFCKSKPYEKAISL 427

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F ++V    I PD   Y+V+++ FC+G K+  A++ ++ +  +GC PNV  YT ++N  C
Sbjct: 428 FRQIVQG--IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALC 485

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           K+    EA  +  +M +    PD + + T+I         D+A +L  EM ERG   D
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 109/232 (46%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P    ++ L+    R G    A  +   + + G  P++   T L+N +C +  L  A  +
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
              +     +P+ + + TLIN FC  G V +A+    ++  +G   D  ++  ++ GLC+
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G+  +AL +L+K+  D +  N  +Y  V++  C+   +  A+ L  L+  RG L     
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
            N L+   C  G   +A   L  +V     P+  ++ +LV+ +C+  +++ A
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEA 284



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 68/151 (45%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           VD+ L     M  +     I  F+ +LG + R G    A+ +  +L   GI  + A+  I
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++N  C +  L  A  LL  +L  GF P+  T N L+   C  GM   A      L+  G
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  +  S+  L+  +C+  +   A +LL ++
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKM 186



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 35/201 (17%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +F +  L+    + G    A  +F ++ +  + P     T LINC+C    +  A  L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L  + + G + ++VTFN ++ G C  G + +A+     L   G  L++ SY  ++N    
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLIN---- 168

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
                                           LCK G   DA   L  + E   +P   +
Sbjct: 169 -------------------------------GLCKNGQTRDALQLLQKMEEDLVRPNLIT 197

Query: 487 WALLVELICRGRKLLFAFELL 507
           ++ +++ +C+ R +  A  L 
Sbjct: 198 YSTVIDGLCKDRLIADALRLF 218


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 171/317 (53%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN  I+  LI   CK+G +E A ++  EM K  +   N  TY+ LI GL KNG  ++ 
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL-VANEWTYTVLIHGLFKNGIKKQG 252

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E++E+M  +  + P+  TYN +++  C+ G+   A K+ + M+  G + N+  Y TL+ 
Sbjct: 253 FEMYEKM-QEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+E K  EA +V D+MK++++ P+ I Y TLI+ FC  G++ +AL L +++K RG   
Sbjct: 312 GLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSP 371

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT+N+++ G CR+G    A  M++++   GI  +K +Y I+++   +   +E AI+L 
Sbjct: 372 SLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLR 431

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G +P   T + L+   C  G   +A+     +VE   +P    +  ++   C+ 
Sbjct: 432 SSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKE 491

Query: 498 RKLLFAFELLDELVIKE 514
                A  L  ++  KE
Sbjct: 492 GSSYRALRLFRDMEEKE 508



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 182/324 (56%), Gaps = 5/324 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  N   + +LI    K G  +  FE+ ++M++  + +PNL TY+ +++ LCK+GR ++A
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGV-FPNLYTYNCVMNQLCKDGRTKDA 287

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F+EM  +  +  + +TYN LI G CR  K + A K+M+ MK+   NPN+  Y TL++
Sbjct: 288 FKVFDEMRERG-VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLID 346

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC  GKL +A  +  ++K+  L P  + Y  L++ FCR G    A +++KEM+ERG K 
Sbjct: 347 GFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
             VT+ I++    R   +E A+ +   +   G+  +  +Y ++++  C KG++ +A  L 
Sbjct: 407 SKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M+ +   P+    N +++  CK G +  A      + E    P   S++ L+ ++C+ 
Sbjct: 467 KSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKE 526

Query: 498 RKLLFAFELLDELV---IKESGTI 518
           RKL  A +L+++++   I  S TI
Sbjct: 527 RKLKEAEDLVEKMIDSGIDPSDTI 550



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 200/409 (48%), Gaps = 43/409 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF+ N   Y T++D   +  + E    +  +M       +E  +  L+       + ++ 
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQG 252

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            EM+ K+                                     Q   + PN   +N ++
Sbjct: 253 FEMYEKM-------------------------------------QEHGVFPNLYTYNCVM 275

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G  + AF+V  EM++  +S  N++TY+TLI GLC+  +  EA ++ ++M S   
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVS-CNIVTYNTLIGGLCREMKANEANKVMDQMKSY-V 333

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ +TYN LIDGFC  GK+ +A  +   +K+ G +P++  Y  L++GFC++G    A 
Sbjct: 334 INPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAA 393

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++  EM+   +KP  + YT LI+ F R+  ++ A++L   M+E G   D+ T+++++ G 
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGF 453

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C +G++ EA  + + +    +  N+  Y  ++   C++G   +A+ L R M  +   P+ 
Sbjct: 454 CIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNV 513

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           A+ + L+  LCK    ++A   +  +++ G  P SD+   +  LI R +
Sbjct: 514 ASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP-SDT---ICNLISRAK 558



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 175/362 (48%), Gaps = 38/362 (10%)

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +Q   + + L Y  +    K  + ++ ++I  + +  +L+S+     EM       P   
Sbjct: 72  SQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGF-VPGSN 130

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            ++ L+  +  +  F +    F E  SK +++ D  ++ ++I G C  G+++++  ++  
Sbjct: 131 CFNNLLTFVVGSSSFNQWWCFFNE--SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVE 188

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI-------- 351
           ++  G +PNV  YTTL++G CK+G++++AK++F EM  F L  +   YT LI        
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248

Query: 352 -----------------------NC----FCRAGRVDEALELLKEMKERGCKADIVTFNI 384
                                  NC     C+ GR  +A ++  EM+ERG   +IVT+N 
Sbjct: 249 KKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT 308

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++GGLCRE K  EA  +++++    I  N  +Y  +++  C  G+L KA+ L R +  RG
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRG 368

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N L+   C+ G    AA  +  + E G KP   ++ +L++   R   +  A 
Sbjct: 369 LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAI 428

Query: 505 EL 506
           +L
Sbjct: 429 QL 430


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 215/450 (47%), Gaps = 22/450 (4%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           SL     +P  AL  F  +     F H+ AT+ ++L  L R++   A + V   M     
Sbjct: 58  SLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCT 117

Query: 127 KFHEGIFL-NLMKHFSNCSL---HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
             H+  FL NL++  +  +    H+  L            K SL + +  L  L   + V
Sbjct: 118 SPHDATFLLNLLRRMNTAAAAADHQHQLAF----------KLSLTSYNRLLMCLSRFSMV 167

Query: 183 DLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           D   +  K   ++    + PN    N ++  +CK G +  A      + + +   P+L T
Sbjct: 168 DEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPG-PDLFT 226

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y++L+ G C+N     A  +F  M  ++     A++Y  LI G C  GK+  A +    M
Sbjct: 227 YTSLVLGYCRNDDVERACGVFCVMPRRN-----AVSYTNLIHGLCEAGKLHEALEFWARM 281

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           + +GC P V  YT L+   C+ G+  EA  +F EM+    +P+   YT LI+  C+ GR+
Sbjct: 282 REDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRM 341

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEAL++L EM E+G    +V FN ++G  C+ G +E+A+G+L  +    +  N  +Y  +
Sbjct: 342 DEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNEL 401

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +   C+   +++A+ LL  M+     P   T N L+  LC+ G+ + A+     ++  GF
Sbjct: 402 ICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGF 461

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDEL 510
            P+  ++   +  +CR  ++  A ++L+ L
Sbjct: 462 SPDQWTFNAFMVCLCRMGRVGEAHQILESL 491



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 160/312 (51%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    + +L+   C+ G    A  +  EM++     PN+ TY+ LID LCK GR  EA++
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMRERGCE-PNVYTYTVLIDYLCKEGRMDEALK 346

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  EMV K  + P  + +N LI  +C+ G ++ A  ++  M++    PNV  Y  L+ GF
Sbjct: 347 MLNEMVEKG-VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+   +  A  + ++M    L PD + Y TLI+  C  G VD A  L + M   G   D 
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQ 465

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TFN  +  LCR G++ EA  +LE L    +  N+ +Y  +++  C+ G++E A  L + 
Sbjct: 466 WTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKR 525

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML    LP+  T N ++  L K G  +DA + +  + +   KP   ++ +LVE + +   
Sbjct: 526 MLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYD 585

Query: 500 LLFAFELLDELV 511
              A E+L+ L+
Sbjct: 586 FDRANEILNRLI 597



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 177/331 (53%), Gaps = 7/331 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLES 220
           +P++   +  ++ L +  ++D A   LK  N+ +   + P+   FN LI  +CKRG +E 
Sbjct: 322 EPNVYTYTVLIDYLCKEGRMDEA---LKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  VL  M+  ++  PN+ TY+ LI G C+      A+ L  +MV + ++ PD +TYN L
Sbjct: 379 AVGVLGLMESKKVC-PNVRTYNELICGFCRGKSMDRAMALLNKMV-ESKLSPDVVTYNTL 436

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I G C  G VD A ++   M  +G +P+ + +   M   C+ G++ EA ++ + +K   +
Sbjct: 437 IHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHV 496

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           K +   YT LI+ +C+AG+++ A  L K M    C  + +TFN+++ GL +EGK+++A+ 
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAML 556

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           ++E +    +     +Y I++    ++ + ++A E+L  ++  G+ P+  T    +   C
Sbjct: 557 LVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYC 616

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             G  E+A   +  +   G   +S  + LL+
Sbjct: 617 SQGRLEEAEEMVIKIKNEGVLLDSFIYNLLI 647



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 167/315 (53%), Gaps = 6/315 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN   + +LI + CK G ++ A ++L EM +  ++ P+++ ++ LI   CK G   +A+
Sbjct: 322 EPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVA-PSVVPFNALIGSYCKRGMMEDAV 380

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +   M SK ++ P+  TYN LI GFCRG  +DRA  ++  M  +  +P+V  Y TL++G
Sbjct: 381 GVLGLMESK-KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHG 439

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+ G +  A  +F  M      PD   +   + C CR GRV EA ++L+ +KE+  KA+
Sbjct: 440 LCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKAN 499

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
              +  ++ G C+ GKIE A  + +++  +    N  ++ ++++   ++G+++ A+ L+ 
Sbjct: 500 EHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVE 559

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M      P   T N L+  + K    + A   L  L+  G++P   ++   ++  C   
Sbjct: 560 DMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQG 619

Query: 499 KLLFAFELLDELVIK 513
           +L    E  +E+VIK
Sbjct: 620 RL----EEAEEMVIK 630



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 154/293 (52%), Gaps = 2/293 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI   C+  +++ A  +L +M +S++S P+++TY+TLI GLC+ G    A  
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLS-PDVVTYNTLIHGLCEVGVVDSASR 451

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF  M+ +D   PD  T+N  +   CR G+V  A +I+E +K      N   YT L++G+
Sbjct: 452 LFRLMI-RDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK GK++ A  +F  M      P++I +  +I+   + G+V +A+ L+++M +   K  +
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+NI++  + +E   + A  +L +L   G   N  +Y   +   C +G LE+A E++  
Sbjct: 571 HTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           +   G L      N L+      G+ + A   L  +   G +P   ++++L++
Sbjct: 631 IKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMK 683



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 180/382 (47%), Gaps = 5/382 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F  + E +G   N  TY  ++D L +  + +    +L +M  +        F  L+
Sbjct: 309 ALSLFGEMRE-RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALI 367

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             +    + E  + +   +    +  P+++  +  +        +D A   L    +  +
Sbjct: 368 GSYCKRGMMEDAVGVLGLMES-KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVES-K 425

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N LI   C+ G ++SA  + + M +   S P+  T++  +  LC+ GR  EA
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFS-PDQWTFNAFMVCLCRMGRVGEA 484

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++ E +  K  +  +   Y  LIDG+C+ GK++ A  + + M    C PN   +  +++
Sbjct: 485 HQILESLKEK-HVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMID 543

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  KEGK+Q+A  + ++M  F +KP    Y  L+    +    D A E+L  +   G + 
Sbjct: 544 GLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQP 603

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++VT+   +   C +G++EEA  M+ K+  +G+ L+   Y +++N     G L+ A  +L
Sbjct: 604 NVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVL 663

Query: 438 RLMLCRGFLPHYATSNELLVRL 459
           R M   G  P Y T + L+  L
Sbjct: 664 RRMFGTGCEPSYLTYSILMKHL 685



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 151/324 (46%), Gaps = 31/324 (9%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            +K N   +  LI  +CK G +E A  + K M   +   PN IT++ +IDGL K G+ ++
Sbjct: 495 HVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE-CLPNSITFNVMIDGLRKEGKVQD 553

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L E+M   D + P   TYN+L++   +    DRA +I+  + ++G  PNV  YT  +
Sbjct: 554 AMLLVEDMAKFD-VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFI 612

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
             +C +G+L+EA+E+  ++KN  +  D+  Y  LIN +   G +D A  +L+ M   GC+
Sbjct: 613 KAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCE 672

Query: 377 ADIVTFNIILGGLCREGKIEEALG-----------------------------MLEKLWY 407
              +T++I++  L  E   +E                                + EK+  
Sbjct: 673 PSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAE 732

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G   N  +Y  ++N  C+ G L  A  L   M   G  P     N LL   CK GM  +
Sbjct: 733 CGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGE 792

Query: 468 AAIALFGLVEMGFKPESDSWALLV 491
           A   L  ++E       +S+ LL+
Sbjct: 793 AVTLLDSMMECSHLAHLESYKLLI 816



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 182/443 (41%), Gaps = 41/443 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF+ +  T+   +  L R  +      +L  +  +  K +E  +  L+  +      E
Sbjct: 458 RDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIE 517

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
               +F ++  +  E  P+    +  ++ L +  +V  A   L        +KP    +N
Sbjct: 518 HAASLFKRM--LAEECLPNSITFNVMIDGLRKEGKVQDAM-LLVEDMAKFDVKPTLHTYN 574

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           IL++   K    + A E+L  +  S    PN++TY+  I   C  GR  EA    EEMV 
Sbjct: 575 ILVEEVLKEYDFDRANEILNRLISSGYQ-PNVVTYTAFIKAYCSQGRLEEA----EEMVI 629

Query: 267 K---DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           K   + +L D+  YN+LI+ +   G +D A  ++  M   GC P+   Y+ LM     E 
Sbjct: 630 KIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEK 689

Query: 324 KLQEAKE-----------------------------VFDEMKNFLLKPDTIGYTTLINCF 354
             +E                                +F++M      P+   Y+ LIN  
Sbjct: 690 HKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGL 749

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ GR++ A  L   M+E G     +  N +L   C+ G   EA+ +L+ +       + 
Sbjct: 750 CKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHL 809

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            SY++++    ++   EKA  +   +L  G+         L+  L K G  +  +  L  
Sbjct: 810 ESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNL 869

Query: 475 LVEMGFKPESDSWALLVELICRG 497
           + + G +   +++++L++ + R 
Sbjct: 870 MEKNGCRLHPETYSMLMQELNRA 892



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 6/181 (3%)

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ I   T++N +C+ G +  A      +       D+ T+  ++ G CR   +E A G+
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGV 246

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
              +       N  SY  +++  C+ G+L +A+E    M   G  P   T   L+  LC+
Sbjct: 247 FCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCE 302

Query: 462 AGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
           +G  E  A++LFG + E G +P   ++ +L++ +C+  ++  A ++L+E+V K      V
Sbjct: 303 SG-RELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVV 361

Query: 521 P 521
           P
Sbjct: 362 P 362


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 168/287 (58%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K+M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 149/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLR-PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M +NG  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +K+  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           +  L++  C+   L  AFE   +++
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKKMI 338


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 171/311 (54%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +N L+   CK G LE A ++L+++  +  + P+++TY++LIDGL K  R  EA +
Sbjct: 67  PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVTYTSLIDGLGKKKRSFEAYK 125

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+EM S+   L D + Y  LI G  + GK+ +A  + + M + GC P+V   +T+++G 
Sbjct: 126 LFKEMASRGLAL-DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G++  A  +F  M+   L P+ + Y+ LI+  C+A ++D ALE+L +MK+  C  D 
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+NI++ GLC+ G +  A    +++   G   +  +Y I+++  C+ G  + A  +   
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M      P+  T   L+  LCK      A++    + E G  P+S  ++ LV+ +C+  K
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 500 LLFAFELLDEL 510
           L     L DE+
Sbjct: 365 LEGGCMLFDEM 375



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 189/401 (47%), Gaps = 39/401 (9%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK- 155
           TY TI+D LA+ KK +   A++ ++T   C      +  L+         E  +++  K 
Sbjct: 36  TYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 95

Query: 156 ---------------IHPITREKPSLKAI--------------STCLNLLI----ESNQV 182
                          I  + ++K S +A               + C   LI    ++ ++
Sbjct: 96  VDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKI 155

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
             A +  K         P+    + +I   CK G + +A  + K M+   ++ PN + YS
Sbjct: 156 PQASSVYKTMTSQ-GCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLA-PNEVVYS 213

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            LI GLCK  +   A+E+  +M  K    PD +TYN+LIDG C+ G V  A+   + M  
Sbjct: 214 ALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            GC P+V+ Y  L++GFCK G    A  VFD+M +    P+ + Y TLI+  C+  ++ +
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A    + MKERGC  D   ++ ++ GLC+ GK+E    + +++   G+  ++   R++ +
Sbjct: 333 ASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH 392

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
             C+   +++A+ L   +   G +PH    N ++  L K+G
Sbjct: 393 L-CKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSG 431



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 169/306 (55%), Gaps = 2/306 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F+ILI    K G L  A  + +E   +  +  ++ TY+T++D L KN + +EA+ L E+ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTI-DIHTYTTIVDWLAKNKKIQEAVALMEK- 59

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           ++ +   P   TYN L++G C+ G+++ A  ++  + +NGC P+V  YT+L++G  K+ +
Sbjct: 60  ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             EA ++F EM +  L  DT+ YT LI    +AG++ +A  + K M  +GC  D+VT + 
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC+ G+I  A+ + + +   G+  N+  Y  +++  C+  +++ A+E+L  M    
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N L+  LCK+G    A      ++E G KP+  ++ +L+   C+      A 
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 505 ELLDEL 510
            + D++
Sbjct: 300 GVFDDM 305



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 141/273 (51%), Gaps = 3/273 (1%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T+S LI+GL K G   +A  L +E  +    + D  TY  ++D   +  K+  A  +ME 
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTI-DIHTYTTIVDWLAKNKKIQEAVALMEK 59

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +  NGC P +  Y  L+NG CK G+L+EA ++  ++ +    PD + YT+LI+   +  R
Sbjct: 60  ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             EA +L KEM  RG   D V +  ++ GL + GKI +A  + + +   G   +  +   
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G +  A+ + + M  RG  P+    + L+  LCKA    D A+ +   ++  
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA-RKMDCALEMLAQMKKA 238

Query: 480 F-KPESDSWALLVELICRGRKLLFAFELLDELV 511
           F  P++ ++ +L++ +C+   +  A    DE++
Sbjct: 239 FCTPDTITYNILIDGLCKSGDVAAARAFFDEML 271



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 149/353 (42%), Gaps = 80/353 (22%)

Query: 90  GFNHNNATYATILDKLARYKK-FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           G   +  TY +++D L + K+ FEA   + ++M           +  L++      L   
Sbjct: 99  GCTPDVVTYTSLIDGLGKKKRSFEAYK-LFKEMASRGLALDTVCYTALIRGL----LQAG 153

Query: 149 VLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            +     ++     +   P +  +ST ++ L ++ ++  A    K S +   L PN  ++
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK-SMEARGLAPNEVVY 212

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           + LI   CK   ++ A E+L +MKK+    P+ ITY+ LIDGLCK+G    A   F+EM+
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKA-FCTPDTITYNILIDGLCKSGDVAAARAFFDEML 271

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIM---------------------------- 297
                 PD  TYN+LI GFC+ G  D A  +                             
Sbjct: 272 EAG-CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQL 330

Query: 298 -------EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK-------------- 336
                  + MK  GC P+ F Y++L++G CK GKL+    +FDEM+              
Sbjct: 331 TKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLI 390

Query: 337 ----------------NFLLK---PDTIGYTTLINCFCRAGRVDEALELLKEM 370
                           N + K   P    Y ++I+   ++G+V+E   + +EM
Sbjct: 391 FHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 203/428 (47%), Gaps = 8/428 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG +    TY  ++D L++  + E    +   M    C+    ++  L+   +     +
Sbjct: 139 EKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLD 198

Query: 148 RVLEMFHKI--HPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
             L   +++  +   R  +P +   +  +  L  S  ++ A  +    +  L L   T  
Sbjct: 199 EALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFT-- 256

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FN L+   CK    E A   +K+M + +  +P L TY++L+DG  K GR  EA+   +E 
Sbjct: 257 FNPLVAALCKAERTEEAIAFVKKMSERR-CFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V +   +PDA+TY  +IDG C+ G+V+   +    M+N G  P+   Y  L++GF K   
Sbjct: 316 VERG-FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 374

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A  V+ +M        T+ Y  +++  C+AGRV EA      M+ERGC A +VT++ 
Sbjct: 375 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 434

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C EG +  A+ +  ++   G   N  SY I++   C+ G+L KA      +L R 
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFA 503
             P   T N  L  LC+        + LF  +V  G  P   S+++L++ ICR   L   
Sbjct: 495 LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVT 554

Query: 504 FELLDELV 511
            E+  E+V
Sbjct: 555 LEIFHEMV 562



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 172/352 (48%), Gaps = 41/352 (11%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L ++ + + A  F+K  ++  R  P    +  L+    K G L+ A   LKE  +     
Sbjct: 264 LCKAERTEEAIAFVKKMSER-RCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGF-I 321

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+ +TY+++IDGLCK GR  E  E F EM ++    PDA+TY  LIDGF +   + +A +
Sbjct: 322 PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGY-EPDAVTYAALIDGFMKAKMIPKAHR 380

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M  +G   +   Y  +++G CK G++ EA   F  M+        + Y+ L++ FC
Sbjct: 381 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 440

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY-------- 407
             G V  A+EL + M +RGC+ ++V++NII+ GLCR GK+ +A    EKL          
Sbjct: 441 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 500

Query: 408 -----------------DGIYL-----------NKASYRIVLNFSCQKGELEKAIELLRL 439
                            DG+ L           N  SY I+++  C+ G LE  +E+   
Sbjct: 501 TFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHE 560

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS-WALL 490
           M+ RG  P     N L+  LC AG   D A+ +F  +E    P++ S W+LL
Sbjct: 561 MVSRGVAPDVVVFNTLIRWLCIAGRV-DEALEVFRELERRSAPDAWSYWSLL 611



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 186/421 (44%), Gaps = 76/421 (18%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P + A +  +N L    ++D A + L+ + +    +P+   +N+ I   CK   ++ AF+
Sbjct: 39  PDMVAFTVVINGLCREKRLDEAFSVLERAVRA-GCEPDYVTYNVFIDGLCKAERVDDAFQ 97

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +LK+M + +   P  +TY+ L+DGL K GR  EA+ + E+MV K    P   TY V+IDG
Sbjct: 98  LLKKMDEKK-CLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNS-PTLKTYTVVIDG 155

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM---------------------NG---- 318
             + G+V+ A++I   M  NGC P+ F YT L+                     NG    
Sbjct: 156 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARG 215

Query: 319 --------------FCKEGKLQEAKEVFDEMKN--------------------------- 337
                          C  G L++A   FDE+ +                           
Sbjct: 216 VEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIA 275

Query: 338 FLLK-------PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           F+ K       P    YT+L++ F + GR+DEAL  LKE  ERG   D VT+  I+ GLC
Sbjct: 276 FVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLC 335

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + G++EE      ++   G   +  +Y  +++   +   + KA  + R ML  G +    
Sbjct: 336 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 395

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T N +L  LCKAG   +A      + E G      +++ L++  C    +  A EL   +
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455

Query: 511 V 511
           +
Sbjct: 456 L 456



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 45/335 (13%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T +   L+   CK G L+ A  +L EM  S    P+++ ++ +I+GLC+  R  EA  +
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPCS----PDMVAFTVVINGLCREKRLDEAFSV 63

Query: 261 FEEMVSKDQILPDALTYNVLIDGFC----------------------------------- 285
            E  V +    PD +TYNV IDG C                                   
Sbjct: 64  LERAV-RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + G++D A  I+E M   G +P +  YT +++G  K G+++EA+ +F +M     +PD  
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGC----KADIVTFNIILGGLCREGKIEEALGM 401
            YT LI+   + G++DEAL  L +M E GC    + D+V  N+++  LC  G +E+AL  
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            ++L  D + L   ++  ++   C+    E+AI  ++ M  R   P   T   L+    K
Sbjct: 243 FDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLK 301

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            G  ++A + L   VE GF P++ ++  +++ +C+
Sbjct: 302 LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCK 336



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 154/317 (48%), Gaps = 16/317 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++GF  +  TY +I+D L +  + E       +M     +     +  L+  F       
Sbjct: 317 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKA---- 372

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI--- 204
              +M  K H + R+      + + +   I  + +  A    +     L ++   C+   
Sbjct: 373 ---KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV 429

Query: 205 --FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             ++ L+   C  G + +A E+ + M       PNL++Y+ +I GLC+ G+  +A   FE
Sbjct: 430 VTYSALMDGFCSEGNVSAAVELFRRMLDRGCE-PNLVSYNIIIRGLCRAGKLAKAYFYFE 488

Query: 263 EMVSKDQILPDALTYNVLIDGFC-RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           +++ + ++ PD  T+N  + G C R   V    ++ E M + G +PN+ +Y+ LM+G C+
Sbjct: 489 KLLQR-RLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICR 547

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G L+   E+F EM +  + PD + + TLI   C AGRVDEALE+ +E+ ER    D  +
Sbjct: 548 AGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWS 606

Query: 382 FNIILGGLCREGKIEEA 398
           +  +L  L R  ++EEA
Sbjct: 607 YWSLLDALSRCERMEEA 623



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 129/247 (52%), Gaps = 7/247 (2%)

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D+ L D      L++G C+ G++DRA  +++ M    C+P++  +T ++NG C+E +L E
Sbjct: 3   DRKLVDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDE 59

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  V +       +PD + Y   I+  C+A RVD+A +LLK+M E+ C    VT+  ++ 
Sbjct: 60  AFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVD 119

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G+++EA+ +LE++   G      +Y +V++   + G +E+A  +   ML  G  P
Sbjct: 120 GLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRP 179

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVE----MGFKPESDSWALLVELICRGRKLLFA 503
                  L+  L K G  ++A + L  +VE     G +P+     L++  +C    L  A
Sbjct: 180 DAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDA 239

Query: 504 FELLDEL 510
               DEL
Sbjct: 240 LAYFDEL 246



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 20/295 (6%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH---FSNCSL 145
           +G+  +  TYA ++D   + K       V RQM         G  ++ + +         
Sbjct: 353 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM------LQSGTVVSTVTYNIILDGLCK 406

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLL----IESNQVDLAQNFLKYSNQHLRLKPN 201
             RV E +     +  E+  +  + T   L+     E N     + F +  ++    +PN
Sbjct: 407 AGRVAEAYATFLAM-EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC--EPN 463

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN-GRFREAIEL 260
              +NI+I+  C+ G L  A+   +++ + ++  P++ T+++ + GLC+      + +EL
Sbjct: 464 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC-PDVYTFNSFLHGLCQRLDTVGDGVEL 522

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           FE MVS+    P+  +Y++L+DG CR G ++   +I   M + G  P+V  + TL+   C
Sbjct: 523 FESMVSQGTS-PNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLC 581

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
             G++ EA EVF E++     PD   Y +L++   R  R++EA  L   MK +GC
Sbjct: 582 IAGRVDEALEVFRELER-RSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGC 635



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 3/199 (1%)

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L+NG CK G+L  A  + DEM      PD + +T +IN  CR  R+DEA  +L+    
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            GC+ D VT+N+ + GLC+  ++++A  +L+K+          +Y  +++   + G L++
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+ +L  M+ +G  P   T   ++  L KAG  E+A      ++  G +P++  +  L+ 
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 493 LICRGRKLLFAFELLDELV 511
            + +  KL  A   L+++V
Sbjct: 190 GLAKIGKLDEALVYLNQMV 208



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 37/261 (14%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   +  TY  ILD L +  +     A    M    C      +  LM  F +     
Sbjct: 387 QSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVS 446

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             +E+F ++     E P+L + +  +  L  + ++  A  + +   Q  RL P+   FN 
Sbjct: 447 AAVELFRRMLDRGCE-PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR-RLCPDVYTFNS 504

Query: 208 LIKHHCKR-GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +   C+R  T+    E+ + M  SQ + PNL +YS L+DG+C+ G     +E+F EMVS
Sbjct: 505 FLHGLCQRLDTVGDGVELFESMV-SQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVS 563

Query: 267 K----------------------DQIL-----------PDALTYNVLIDGFCRGGKVDRA 293
           +                      D+ L           PDA +Y  L+D   R  +++ A
Sbjct: 564 RGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCERMEEA 623

Query: 294 KKIMEFMKNNGCNPNVFNYTT 314
           + +   MK  GC P  ++ T 
Sbjct: 624 RLLSFHMKLQGCAPRHYDLTV 644



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 3/129 (2%)

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L GLC+ G+++ A+ +L+++       +  ++ +V+N  C++  L++A  +L   +  G
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEMPCSP---DMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P Y T N  +  LCKA   +DA   L  + E    P + ++  LV+ + +  +L  A 
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 505 ELLDELVIK 513
            +L+++V K
Sbjct: 132 AILEQMVEK 140


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 156/259 (60%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 171 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ-PDVYTYSVLINGLCKESKMDDA 229

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A ++ + M +   +P++  Y TL+ 
Sbjct: 230 NELFDEMLDKG-LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIY 288

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A+++ DEM+   LKPD I YTTLI+  C+ G ++ A E  K M +   + 
Sbjct: 289 GLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRL 348

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++    +LL
Sbjct: 349 DDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLL 408

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 409 KEMQRDGHVPSVVTYNVLM 427



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 163/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A+ +F+  ++K  + P  +++N L++G+ R G +D 
Sbjct: 135 GYPASLYFFNILMHRFCKEGDIRVALSVFDA-ITKWGLRPSVVSFNTLMNGYIRLGDLDE 193

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 194 GFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLID 253

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 254 GHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKP 313

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K SY  +++  C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 314 DKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKML 373

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G +P++ ++ +++   C+   +    +LL E+
Sbjct: 374 REMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEM 411



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 152/261 (58%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F   S  H   ++P+   +++LI   CK   ++ A
Sbjct: 172 RPSVVSFNTLMNGYIRLG--DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 229

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 230 NELFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQ-SLSPDLITYNTLI 287

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A+ +++ M+  G  P+  +YTTL++G CKEG L+ A E    M    ++
Sbjct: 288 YGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIR 347

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G + D  T+ +I+   C++G +     +
Sbjct: 348 LDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKL 407

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 408 LKEMQRDGHVPSVVTYNVLMN 428



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 207 QPDVYTYSVLINGLCKESKMDDANELF---DEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 263

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A EV K+M    +S P+LITY+TLI GLCK G  ++A +L +EM  K  + PD ++Y  L
Sbjct: 264 AMEVYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKG-LKPDKISYTTL 321

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G ++ A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 322 IDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGL 381

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           +PDT  YT +IN FC+ G V    +LLKEM+  G    +VT+N+++ G
Sbjct: 382 RPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 16  TLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSG 75

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E +                   G
Sbjct: 76  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECG 135

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCKEG ++ A  VFD +  + L+P  + + TL+N + R G +DE  
Sbjct: 136 YPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 195

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 196 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 255

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 256 CKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDK 315

Query: 485 DSWALLVELICRGRKLLFAFE 505
            S+  L++  C+   L  AFE
Sbjct: 316 ISYTTLIDGCCKEGDLETAFE 336



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 40/241 (16%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F+ + + KG   N  T+ T++D   +  + +    V +QM  ++            
Sbjct: 229 ANELFDEMLD-KGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSL----------- 276

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     P L   +T +  L +   +  AQ+ +        
Sbjct: 277 -------------------------SPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK-G 310

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+   +  LI   CK G LE+AFE  K M +  +   + + Y+ LI GLC+ GR  +A
Sbjct: 311 LKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD-VAYTALISGLCQEGRSIDA 369

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++  EM+S   + PD  TY ++I+ FC+ G V    K+++ M+ +G  P+V  Y  LMN
Sbjct: 370 EKMLREMLSVG-LRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 428

Query: 318 G 318
           G
Sbjct: 429 G 429



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 85/167 (50%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           +  L++ FC+ G +  AL +   + + G +  +V+FN ++ G  R G ++E   +   + 
Sbjct: 143 FNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 202

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T   L+   CK G  +
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 262

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            A      ++     P+  ++  L+  +C+   L  A +L+DE+ +K
Sbjct: 263 LAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK 309



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 53/268 (19%)

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-----KNF------------- 338
           + F  N+     + +Y T+++  C    L EAK +   +     KN              
Sbjct: 5   LSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQG 64

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALE--------------------------------- 365
             + D   ++ LI  +  +G + +A+E                                 
Sbjct: 65  TQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLV 124

Query: 366 --LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
               KE+ E G  A +  FNI++   C+EG I  AL + + +   G+  +  S+  ++N 
Sbjct: 125 WXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNG 184

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             + G+L++   L   M   G  P   T + L+  LCK    +DA      +++ G  P 
Sbjct: 185 YIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPN 244

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             ++  L++  C+  ++  A E+  +++
Sbjct: 245 GVTFTTLIDGHCKNGRVDLAMEVYKQML 272


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 30/444 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KGF  + +TY+ ++  L    K E    + ++M           +  L+  F    L E
Sbjct: 216 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 275

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFN 206
           +   +F ++  +    P++   +  ++  +++ QV  A + F +  +   R  PN   + 
Sbjct: 276 QAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR--PNDVTYG 332

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMS---------------YPNLITYSTLIDGLCKN 251
            L+   CK G +  AFEV  ++  +  S                PN++TY  L+DGLCK 
Sbjct: 333 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 392

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +   A EL + M+S     P+ + Y+ LIDGFC+ GK+D A+++   M   G  P+V  
Sbjct: 393 HKVDHAHELLDAMLSSG-CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 451

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT+L++   K+G+L  A +V  +M      P+ + YT +I+  CR G  ++AL+LL  M+
Sbjct: 452 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 511

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+GC  ++VT+  ++ GL + GKI+ +L +  ++   G   N  +YR+++N  C  G L+
Sbjct: 512 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 571

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE----MGFKPESDSW 487
           KA  LL  M  + + P Y          C       + IA  G++E     G  P +  +
Sbjct: 572 KARLLLGEMK-QTYWPKYLQGYR-----CAIQGFSKSFIASLGILEEMESYGTVPIAPVY 625

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
            +L++   +  +L  A EL  E++
Sbjct: 626 GMLIDCFSKAGRLEIAMELHKEMM 649



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 206/437 (47%), Gaps = 28/437 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G +    TY  ++    + K+    + +  +M    C+ ++  +  L+          + 
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347

Query: 150 LEMFHKIHPITREK---------------PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
            E++ K+   +                  P++      ++ L ++++VD A   L  +  
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD-AML 406

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
               +PN  +++ LI   CK G ++SA EV  +M K     P++ TY++LID + K+GR 
Sbjct: 407 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY-LPSVHTYTSLIDRMFKDGRL 465

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A+++  +M+ KD   P+ +TY  +IDG CR G+ ++A K++  M+  GC+PNV  YT 
Sbjct: 466 DLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 524

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G  K GK+  + ++F +M      P+ + Y  LIN  C AG +D+A  LL EMK+  
Sbjct: 525 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 584

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
               +  +   + G  +      +LG+LE++   G       Y ++++   + G LE A+
Sbjct: 585 WPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 642

Query: 435 ELLRLMLCRGFLPHYATSN-----ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           EL + M+    +P    ++      L+  LC A   E+A      +   GF PE   +  
Sbjct: 643 ELHKEMM---EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVC 699

Query: 490 LVELICRGRKLLFAFEL 506
           L++ +   +K   A +L
Sbjct: 700 LIKGLVEVKKWDEALQL 716



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 206/449 (45%), Gaps = 62/449 (13%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY T+L    + K+      ++  M  E C  +  +F +L+  + N    E+     
Sbjct: 76  NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCN----EKDYAYA 131

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +K+         L  ++TC                           P   ++NI I   C
Sbjct: 132 YKL---------LNRMTTC------------------------GCPPGYVVYNIFIGSIC 158

Query: 214 KRGTLES------AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            +  L S      A ++  EM  +     N +  +     LC  G+F +A +L +EM+ K
Sbjct: 159 GQEKLPSPDLLDLAEKIYGEMLAANCVL-NKVNVANFARCLCGVGKFDKAFQLIKEMMRK 217

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              +PD  TY+ +I   C   KV++A  + + MK  G  P+V+ YT L++ FCK G +++
Sbjct: 218 G-FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 276

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+ +F+EM++    P  + YT LI+ + +A +V +A ++   M + GC+ + VT+  ++ 
Sbjct: 277 AQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVD 336

Query: 388 GLCREGKIEEALGMLEKL----------WY------DGIYLNKASYRIVLNFSCQKGELE 431
           GLC+ G I +A  +  KL          +Y        +  N  +Y  +++  C+  +++
Sbjct: 337 GLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVD 396

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A ELL  ML  G  P++   + L+   CKAG  + A      + + G+ P   ++  L+
Sbjct: 397 HAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 456

Query: 492 ELICRGRKLLFAFELLDELVIKESGTIQV 520
           + + +  +L  A ++L ++ +K+S T  V
Sbjct: 457 DRMFKDGRLDLAMKVLSQM-LKDSCTPNV 484



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 43/354 (12%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++D L +  K +    +L  M    C+ +  ++  L+  F      +   E+F
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKH 211
            ++       PS+   ++ ++ + +  ++DLA   L   +Q L+    PN   +  +I  
Sbjct: 438 LQMTKCGY-LPSVHTYTSLIDRMFKDGRLDLAMKVL---SQMLKDSCTPNVVTYTAMIDG 493

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C+ G  E A ++L  M++   S PN++TY+ LIDGL K G+   +++LF +M S+    
Sbjct: 494 LCRIGESEKALKLLSLMEEKGCS-PNVVTYTALIDGLGKAGKIDLSLDLFTQM-SRKGCS 551

Query: 272 PDALTYNVLIDGFCRGGKVDRAK---------------------------------KIME 298
           P+ +TY VLI+  C  G +D+A+                                  I+E
Sbjct: 552 PNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILE 611

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF--LLKPDTIGYTTLINCFCR 356
            M++ G  P    Y  L++ F K G+L+ A E+  EM      +K D   Y +LI   C 
Sbjct: 612 EMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCL 671

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           A +V+EA  L  EM  RG   ++  F  ++ GL    K +EAL +   + ++G+
Sbjct: 672 ASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 10/277 (3%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T       LCK GR+ +A++    M+ ++    D +    +I G       D A   +  
Sbjct: 12  TVGCFAHALCKEGRWADALD----MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 67

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+ N C PNV  Y TL++GF K+ +L   K + + M      P+   + +L++ +C    
Sbjct: 68  MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 127

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKI--EEALGMLEKLWYDGIYLNKASY 417
              A +LL  M   GC    V +NI +G +C + K+   + L + EK++ + +  N    
Sbjct: 128 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLN 187

Query: 418 RI-VLNFS---CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
           ++ V NF+   C  G+ +KA +L++ M+ +GF+P  +T ++++  LC A   E A +   
Sbjct: 188 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 247

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +  +G  P+  ++ +L++  C+   +  A  L +E+
Sbjct: 248 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 284



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 158/372 (42%), Gaps = 53/372 (14%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L+E++  D A +FL       R++ N+CI N++        TL S F     +KK Q+ +
Sbjct: 52  LMEASYFDEAMSFLH------RMRCNSCIPNVVTYR-----TLLSGF-----LKKKQLGW 95

Query: 236 --------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
                         PN   +++L+   C    +  A +L   M +     P  + YN+ I
Sbjct: 96  CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG-CPPGYVVYNIFI 154

Query: 282 DGFCRGGKV------DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
              C   K+      D A+KI   M    C  N  N        C  GK  +A ++  EM
Sbjct: 155 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 214

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PDT  Y+ +I   C A +V++A  L +EMK  G   D+ T+ I++   C+ G I
Sbjct: 215 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 274

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           E+A  + E++   G      +Y  +++   +  ++ +A ++   M+  G  P+  T   L
Sbjct: 275 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 334

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESD----------------SWALLVELICRGRK 499
           +  LCKAG    A      L+      +SD                ++  LV+ +C+  K
Sbjct: 335 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 394

Query: 500 LLFAFELLDELV 511
           +  A ELLD ++
Sbjct: 395 VDHAHELLDAML 406


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 227/487 (46%), Gaps = 33/487 (6%)

Query: 43  PVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSE------------QKG 90
           P   S  C+ A +      HG A  + +C     C L +    +             Q G
Sbjct: 171 PASCSTQCLSAFQE--MARHGVAPFVKEC----NCVLRVLRDAARWDDMRAVYSDMLQLG 224

Query: 91  FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVL 150
              +  TY T+LD   +  + +   A+L+ M         G   N + +    +   R  
Sbjct: 225 VEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAA----GCLPNDVTYNVVINGLARKG 280

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL------RLKPNTCI 204
           E+      +   + S KA +   N LI      LA++F++ +   L       + P    
Sbjct: 281 ELEKAAQLVDIMRLSKKASAFTYNPLITGL---LARDFVEKAGALLLEMENEGIVPTVVT 337

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI    K G  E+A     EM+   +  P+LITY++LI+G CK G  ++A+ LF ++
Sbjct: 338 YNTLIDGLFKTGNAEAAQVKFDEMRAKGL-LPDLITYNSLINGYCKAGNLKQALCLFGDL 396

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  + P  LTYN+LIDG+CR G ++ A+++ E M    C P+V  YT LMNG C    
Sbjct: 397 -KRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRN 455

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L   +  FDEM +  L+PD   Y T I+     G +  A +L +EM  RG  +D VT+N+
Sbjct: 456 LAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNV 515

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC+ G +++A  +  K+  DG+ L+  +Y  +++  C++G L +A  +   M+  G
Sbjct: 516 LIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASG 575

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T    +   C+ G    A      ++E G +P   ++ +L+  +CR  +   A+
Sbjct: 576 LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAY 635

Query: 505 ELLDELV 511
           +   E++
Sbjct: 636 QHFHEML 642



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 172/348 (49%), Gaps = 5/348 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAF 222
           P++   +T ++ L ++   + AQ  +K+     + L P+   +N LI  +CK G L+ A 
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQ--VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQAL 390

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  ++K++ +  P ++TY+ LIDG C+ G    A  L EEM  +D  LPD  TY +L++
Sbjct: 391 CLFGDLKRAGLG-PTVLTYNILIDGYCRLGDLEGARRLKEEMTEED-CLPDVCTYTILMN 448

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C    +   +   + M + G  P+ F Y T ++     G +  A ++ +EM    +  
Sbjct: 449 GSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISS 508

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           DT+ Y  LI+  C+ G + +A  L  +M   G + D VT+  ++   C  G++ EA  + 
Sbjct: 509 DTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIF 568

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +   G+  +  +Y I ++  C++G L  A    R ML  G  P+  T N L+  LC+ 
Sbjct: 569 DGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRM 628

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G  E A      ++E G  P   ++ LL++  C+    + A  L  E+
Sbjct: 629 GRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEM 676



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 141/294 (47%), Gaps = 37/294 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC--KN---- 251
           L P    +NILI  +C+ G LE A  + +EM +     P++ TY+ L++G C  +N    
Sbjct: 401 LGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEED-CLPDVCTYTILMNGSCMVRNLAMV 459

Query: 252 -----------------------------GRFREAIELFEEMVSKDQILPDALTYNVLID 282
                                        G    A +L EEM+ +  I  D +TYNVLID
Sbjct: 460 RIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRG-ISSDTVTYNVLID 518

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ G +  A  +   M  +G   +   YT L++  C+ G+L EAK +FD M    L P
Sbjct: 519 GLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSP 578

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
             + YT  I+ +CR G +  A    ++M E G + + VT+N+++  LCR G+ E A    
Sbjct: 579 SVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHF 638

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            ++   G+  NK +Y ++++ SC++G    AI L   M  +G  P + T N L 
Sbjct: 639 HEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALF 692



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 3/208 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +  +T  +N+LI   CK G+L+ A+ +  +M    +   + +TY+ LI   C+ GR  EA
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRL-DCVTYTCLIHAHCERGRLIEA 564

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F+ MV+   + P  +TY + I  +CR G +  A      M   G  PN   Y  LM+
Sbjct: 565 KNIFDGMVASG-LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMH 623

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C+ G+ + A + F EM    L P+   YT LI+  C+ G    A+ L  EM ++G   
Sbjct: 624 ALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHP 683

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKL 405
           D  T N +  G   EG + +A+  LE +
Sbjct: 684 DHCTHNALFKGF-GEGHMYDAVQYLENV 710



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 128/264 (48%), Gaps = 4/264 (1%)

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM--KNNGCNPNV 309
            R+ +   ++ +M+    + P   TYN L+D FC+ G++D+A  +++ M  +  GC PN 
Sbjct: 208 ARWDDMRAVYSDMLQLG-VEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPND 266

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  ++NG  ++G+L++A ++ D M+    K     Y  LI        V++A  LL E
Sbjct: 267 VTYNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPLITGLLARDFVEKAGALLLE 325

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M+  G    +VT+N ++ GL + G  E A    +++   G+  +  +Y  ++N  C+ G 
Sbjct: 326 MENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGN 385

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           L++A+ L   +   G  P   T N L+   C+ G  E A      + E    P+  ++ +
Sbjct: 386 LKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTI 445

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+   C  R L       DE++ K
Sbjct: 446 LMNGSCMVRNLAMVRIFFDEMLSK 469


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 168/287 (58%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM++ + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMEDANELFDEMLN-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 162/280 (57%), Gaps = 2/280 (0%)

Query: 232 QMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
           +  YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +
Sbjct: 129 EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D   ++   M+ +G  P+V+ Y+ L+NG CKE K+++A E+FDEM N  L P+ + +TTL
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTL 247

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+  C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  + +++   G+
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +K +Y  +++ SC++G LE A E  + M+             L+  LC+ G + DA  
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            L  ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 154/294 (52%), Gaps = 9/294 (3%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q+S  ++  +S LI    ++G  R+AIE +  +  + +     
Sbjct: 45  KGSASAVFAAILETKGTQIS--DIYVFSGLITAYLESGFLRDAIECYR-LTKEHKFRVPF 101

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
            T   +I+      K+   K +  F + +   G   +++ +  LM+ F KEG+++ A+ V
Sbjct: 102 DTXRKVIEHLM---KLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSV 158

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD +  + L+P  + + TL+N + + G +DE   L   M+  G + D+ T+++++ GLC+
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCK 218

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           E K+E+A  + +++  +G+  N  ++  +++  C+ G ++ A+E+ + ML +   P   T
Sbjct: 219 ESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 278

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            N L+  LCK G  + A      +   G KP+  ++  L++  C+   L  AFE
Sbjct: 279 YNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFE 332


>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
 gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
          Length = 478

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 219/463 (47%), Gaps = 26/463 (5%)

Query: 68  LIKCEKEPQCALEIFN------TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           L++ E++P+ AL IF+      + S       + AT + +  +LA         ++L + 
Sbjct: 23  LVRAERDPRRALAIFDGATAAASTSAPDPITPSPATVSLLTSRLASAGHLPLATSLLSRS 82

Query: 122 --TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
              + +    E  FL L++ FS        L +F           S ++ +  L  L+  
Sbjct: 83  RGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAALVAH 142

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT--LESAFEVLKEMKKSQMSYPN 237
           + + LA++ L    +     P    +N+L+K HC      +E A  + + + K     P+
Sbjct: 143 SHLPLARSLLA-DMRAAGFAPTAATYNVLLKAHCSDAAAHIEDALRLFRNIPK-----PD 196

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + +Y+T+IDGLC+ GR  EA+++F EMV K  I P  +TY  +I    R G  D A KI 
Sbjct: 197 VCSYNTIIDGLCRRGRLAEALDMFSEMVGK-CIAPTVVTYTTVIHWLAREGCFDDALKIF 255

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M   G +PN+  Y++L++G CK G+   A E+ D M      P+TI Y+++I+  C+ 
Sbjct: 256 HEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKE 315

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
             + EA+E+L  M+ +G K D   F  ++ GLC  G+  EA   L+++   GI  N+ ++
Sbjct: 316 HMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTW 375

Query: 418 RI-------VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
            +       VL   C KGEL +A ++ +    R  +    T+  LLV        E AA 
Sbjct: 376 SLHARINNTVLTALCDKGELGRAFQVYQSTRTRS-ISTDPTTFHLLVESFSKNNIEKAAR 434

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLF-AFELLDELVI 512
            +  ++     PE ++W  ++      +K+   A E+ D L +
Sbjct: 435 VVLDMLSERCIPERETWDAIISGYWSKKKVRQEAKEIWDHLTV 477



 Score = 38.9 bits (89), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 11/180 (6%)

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT----FNIILGGLCREGKI 395
           + P     + L +    AG +  A  LL   + RG    +      F  +L    R  + 
Sbjct: 52  ITPSPATVSLLTSRLASAGHLPLATSLLS--RSRGVFPSVAALEPPFLGLLRAFSRTHRP 109

Query: 396 EEALGMLEKLWYDGIYLNKA-SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
             AL +      D    + A SY  VL        L  A  LL  M   GF P  AT N 
Sbjct: 110 LAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNV 169

Query: 455 LLVRLCKAGMAE-DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           LL   C    A  + A+ LF  +    KP+  S+  +++ +CR  +L  A ++  E+V K
Sbjct: 170 LLKAHCSDAAAHIEDALRLFRNIP---KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGK 226


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 167/287 (58%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 149/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLR-PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M +NG  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 207/426 (48%), Gaps = 26/426 (6%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           NN TY  +++ L +  K    + VL++M   T          L  + S    H +  +M 
Sbjct: 225 NNWTYTVVINGLVKAGKVAEAERVLQEMPVPT----------LANYTSVIGGHCKAGDMG 274

Query: 154 HKIHPI-TREKPSLKAISTCLNLLIESN----QVDLAQNFLK--YSNQHLRLKPNTCIFN 206
              H +   ++   +  +   N LI  +    ++D A   L+   SN  +   P+   ++
Sbjct: 275 KAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFV---PDIFTYD 331

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ILI   C+   L  A ++L  ++      PN+++Y+TLIDG  K  R  +A +LF EMV+
Sbjct: 332 ILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVT 391

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
             Q  PD +TY+ LI G C  G+   A   +E M      P V  Y+++++G C+ G+L 
Sbjct: 392 AGQ-HPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELD 450

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A  VFD M     +P+   Y +LI   C+ GR+ +A   +KEM ERGC  D VT+  ++
Sbjct: 451 AASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLI 510

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL-NFSCQKGELEKAIELLRLMLCRGF 445
            GLCR  + +EA  +  +    GI +++ S  +V+ +  C    LE+A  +LR++L  G 
Sbjct: 511 VGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC----LEQAQRVLRVVLATGN 566

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P       ++  LCK     +A   L  ++  G KP+  +   LV  +CR  K + A  
Sbjct: 567 SPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMA 626

Query: 506 LLDELV 511
            L+E+V
Sbjct: 627 FLEEMV 632



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 193/430 (44%), Gaps = 43/430 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++KG+  +N TY T++    R ++ +    +L +M  ++  F   IF             
Sbjct: 284 KRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM--KSNDFVPDIF------------- 328

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
                                     +  L  + ++  A++ L          PN   +N
Sbjct: 329 ---------------------TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYN 367

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI    K   +  A+++  EM  +   +P+++TYSTLI GLC  GR  EA    EEMV 
Sbjct: 368 TLIDGFSKAARVNDAYQLFLEMVTAG-QHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVG 426

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K +ILP    Y+ +I G CR G++D A  + + M  NGC PN+  Y +L+ G CK G+L 
Sbjct: 427 K-KILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLC 485

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +AK    EM      PD + Y TLI   CR  R DEA +L     E+G +    + N+++
Sbjct: 486 DAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI 545

Query: 387 GGL-CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
             L C    +E+A  +L  +   G       Y  V+   C++  L +A +LL  M+  G 
Sbjct: 546 ASLRC----LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI 601

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P  +T + L+  +C+   A  A   L  +V +G KP   +++ L+  + +  K   A  
Sbjct: 602 KPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHV 661

Query: 506 LLDELVIKES 515
           +L  L+   S
Sbjct: 662 VLRRLISHTS 671



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P       L+   CK G LE A    ++M     S P   T++ LIDGL +  R  EA
Sbjct: 156 LRPVVLTCKFLLNALCKSGNLELALRYFEKMS----SIPCAATWTILIDGLFRAIRVDEA 211

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              FEEM  K   +P+  TY V+I+G  + GKV  A+++++ M      P + NYT+++ 
Sbjct: 212 CYYFEEM--KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLANYTSVIG 265

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G + +A  + ++MK    + D + Y TLI+  CR   +D A ELL+EMK      
Sbjct: 266 GHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVP 325

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWY-DGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           DI T++I++ GLCR  ++ EA  +L  L   D    N  SY  +++   +   +  A +L
Sbjct: 326 DIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQL 385

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M+  G  P   T + L+  LC AG A +A   L  +V     P+   ++ ++  +CR
Sbjct: 386 FLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCR 445

Query: 497 GRKLLFAFELLDELV 511
             +L  A  + D +V
Sbjct: 446 AGELDAASTVFDSMV 460



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 38/362 (10%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A  F  ++      +     +N   +   + G  E A+ + KE K  Q   P+ ITY  L
Sbjct: 73  AMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKE-KWPQELIPDSITYGIL 131

Query: 245 IDGLCKNGRFREAIELFEEMVSKD-------------------------------QILPD 273
           I GLC  G+ + A  L+EEMV +                                  +P 
Sbjct: 132 IRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPC 191

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           A T+ +LIDG  R  +VD A    E MK+    PN + YT ++NG  K GK+ EA+ V  
Sbjct: 192 AATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQ 250

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           EM      P    YT++I   C+AG + +A  LL++MK +G + D +T+N ++ G CR  
Sbjct: 251 EMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQ 306

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR-GFLPHYATS 452
           +I+ A  +LE++  +    +  +Y I++   C+   L +A +LL  +       P+  + 
Sbjct: 307 EIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSY 366

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           N L+    KA    DA      +V  G  P+  +++ L+  +C   +   A   L+E+V 
Sbjct: 367 NTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVG 426

Query: 513 KE 514
           K+
Sbjct: 427 KK 428



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/472 (23%), Positives = 195/472 (41%), Gaps = 74/472 (15%)

Query: 97  TYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
           TY  ++  L R K+  EA D +      + C  +   +  L+  FS  +      ++F +
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +     + P +   ST +  L  + +   A ++L+      ++ P   +++ +I   C+ 
Sbjct: 389 M-VTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGK-KILPKVPVYSSVISGLCRA 446

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G L++A  V   M  +    PNL  Y++LI GLCK GR  +A    +EM  +    PD +
Sbjct: 447 GELDAASTVFDSMVANGCQ-PNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERG-CSPDGV 504

Query: 276 TYNVLIDGFCRGGKVD--------------------------------RAKKIMEFMKNN 303
           TY  LI G CR  + D                                +A++++  +   
Sbjct: 505 TYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLAT 564

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G +P  F Y T++   CKE  L EA+++ ++M    +KPD      L+   CR  +   A
Sbjct: 565 GNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVA 624

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML-----------EKLWYDGI-- 410
           +  L+EM   G K  + T++ +L  L + GK  EA  +L           ++LWY G+  
Sbjct: 625 MAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIA 684

Query: 411 -YLNK----------------------ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            Y N+                       +Y  +L    +   L+   ELLR M    F+ 
Sbjct: 685 AYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVV 744

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           + AT N L+   C+ G   D A+ +   ++    P +     LV+ + R  +
Sbjct: 745 NEATFNILIQGFCRLGQT-DRAVRVLSEMKKVLTPSAAIIKFLVDELARAER 795



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 20/292 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL- 145
           ++G + +  TY T++  L R+ +  EA D  +R +        +GI ++     ++C++ 
Sbjct: 496 ERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSL-------EQGIEIS----ETSCNVV 544

Query: 146 --HERVLEMFHKIHPI---TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
               R LE   ++  +   T   P+    +T +  L + N +  A+  L+       +KP
Sbjct: 545 IASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLE-DMIGAGIKP 603

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +    + L+   C++     A   L+EM +   S P++ TYSTL++ L K G+  EA  +
Sbjct: 604 DGSTVDALVGAMCRQDKAVVAMAFLEEMVRLG-SKPSVGTYSTLLNALFKAGKPSEAHVV 662

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
              ++S     PD L Y  LI  +    +V+ A+ +++ +K+     ++  Y TL+ G  
Sbjct: 663 LRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLF 722

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           +   LQ   E+  EMK      +   +  LI  FCR G+ D A+ +L EMK+
Sbjct: 723 RTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKK 774


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 216/457 (47%), Gaps = 44/457 (9%)

Query: 60  ISHGAAISLIK----CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           ++H   ++LI+    CEKE    +  F+ + E  GF  N   Y+++L  LA+        
Sbjct: 121 VAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDL----- 175

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
             L  +TY   +  +G  + ++ +                               T +N 
Sbjct: 176 GFLAYVTYRRME-ADGFVVGMIDY------------------------------RTIVNA 204

Query: 176 LIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
           L ++   + A+ F+ K       L  +  I   L+   C+   L  A +V   M +    
Sbjct: 205 LCKNGYTEAAEMFMCKILKVGFLLDSH--IVTSLLLGFCRGLNLRDALKVFDLMSREGTC 262

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN ++YS LI GLC+ GR  EA  L ++M  K    P   TY VLI   C  G +D+A 
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRGLIDKAF 321

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            + + M   GC PNV  YT L++G C++GK++EA  V  +M    + P  I Y  LIN +
Sbjct: 322 NLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGY 381

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ GRV  A ELL  M++R CK ++ TFN ++ GLCR GK  +A+ +L+++  +G+  + 
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            SY ++++  C++G +  A +LL  M      P   T   ++   CK G A+ A+  L  
Sbjct: 442 VSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGL 501

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           ++  G   +  +   L++ +C   K   A  +L+ LV
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLV 538



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 218/435 (50%), Gaps = 6/435 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ +S +     N+ +Y+ ++  L    + E    +  QM  + C+     +  L+
Sbjct: 249 ALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           K   +  L ++   +F ++  I R  KP++   +  ++ L    +++ A    +   +  
Sbjct: 309 KALCDRGLIDKAFNLFDEM--IARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD- 365

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+   +N LI  +CK G +  AFE+L  M+K +   PN+ T++ L++GLC+ G+  +
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEK-RACKPNVRTFNELMEGLCRVGKPYK 424

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+ L + M+  + + PD ++YNVLIDG CR G ++ A K++  M +    P+   +T ++
Sbjct: 425 AVHLLKRMLD-NGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAII 483

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           N FCK+GK   A      M    +  D +  TTLI+  C  G+  +AL +L+ + +    
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRML 543

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
               + N+IL  L +  K++E L ML K+   G+  +  +Y  +++   + G++  +  +
Sbjct: 544 TTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRM 603

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L LM   G LP+      ++  LC+ G  E+A   L  + + G  P   ++ ++V+    
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663

Query: 497 GRKLLFAFELLDELV 511
             KL  A E +  +V
Sbjct: 664 NGKLDRALETVRAMV 678



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 217/503 (43%), Gaps = 125/503 (24%)

Query: 82  FNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           FN   E   +G   N  TY  ++D L R  K E  + V R+M        +GIF +++ +
Sbjct: 321 FNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV------KDGIFPSVITY 374

Query: 140 ----------------FSNCSLHE-------------------RVLEMFHKIHPITRE-- 162
                           F   ++ E                   RV + +  +H + R   
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434

Query: 163 ---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
               P + + +  ++ L     +++A   L   N    L+P+   F  +I   CK+G  +
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNS-FDLEPDCLTFTAIINAFCKQGKAD 493

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV-------------- 265
            A   L  M +  +S    +T +TLIDG+C  G+ R+A+ + E +V              
Sbjct: 494 VASAFLGLMLRKGISLDE-VTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVI 552

Query: 266 --------------------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
                               +K  ++P  +TY  L+DG  R G +  + +++E MK +GC
Sbjct: 553 LDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGC 612

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            PNV+ YT ++NG C+ G+++EA+++   M++  + P+ + YT ++  +   G++D ALE
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672

Query: 366 LLKEMKERG----------------------------CKADIVTFNIILGG--------- 388
            ++ M ERG                            C  ++++    LGG         
Sbjct: 673 TVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFL 732

Query: 389 ---LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
              LC+EG+ +E+ G+++ +   G++L KA   I++   C K +  K +EL+ L+L  GF
Sbjct: 733 VTRLCKEGRTDESNGLVQTILKSGVFLEKA-IDIIMESYCSKKKHTKCVELITLVLKSGF 791

Query: 446 LPHYATSNELLVRLCKAGMAEDA 468
           +P + +   ++  L K G  E A
Sbjct: 792 VPSFKSFCLVIQGLKKEGDTERA 814


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 53/461 (11%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  ++  + R ++ + V ++ ++M  +  +     F  L+K F +CS     L  F KI 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKIT 141

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    P +   +T L+ L   ++V  A N L +       +PN   F  L+   C+ G 
Sbjct: 142 KLGLH-PDVVTFNTLLHGLCVEDRVSEALN-LFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDG------------------------------ 247
           +  A  +L  M +  +  P  ITY T++DG                              
Sbjct: 200 IVEAVALLDRMMEDGLQ-PTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIY 258

Query: 248 ------LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                 LCK+GR  +A  LF EM  K  I PD  TYN +I GFC  G+   A+++++ M 
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
               +P+V  Y  L+N F KEGK  EA+E++DEM    + P+TI Y+++I+ FC+  R+D
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  +   M  +GC  +++TFN ++ G C   +I++ + +L ++   G+  +  +Y  ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM--- 478
           +     G+L  A++LL+ M+  G  P   T + LL  LC  G  +D A+ +F +++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD-ALEMFKVMQKSKK 496

Query: 479 ---------GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                    G +P+  ++ +L+  +    K L A EL +E+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 224/454 (49%), Gaps = 20/454 (4%)

Query: 70  KCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
            C K P  AL  F  ++ + G + +  T+ T+L  L    +      +  QM   TC+ +
Sbjct: 126 SCSKLP-FALSTFGKIT-KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQN 187
              F  LM          R++E    +  +  +  +P+     T ++ + +      A +
Sbjct: 184 VVTFTTLMNGLCR---EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            L+   +   + PN  I++ +I   CK G    A  +  EM++  + +P+L TY+++I G
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVG 299

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C +GR+ +A +L +EM+ + +I PD +TYN LI+ F + GK   A+++ + M   G  P
Sbjct: 300 FCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N   Y+++++GFCK+ +L  A+ +F  M      P+ I + TLI+ +C A R+D+ +ELL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM E G  AD  T+N ++ G    G +  AL +L+++   G+  +  +   +L+  C  
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 428 GELEKAIELLRLML-----------CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           G+L+ A+E+ ++M              G  P   T N L+  L   G   +A      + 
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G  P++ +++ +++ +C+  +L  A ++ D +
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 177/359 (49%), Gaps = 48/359 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY++++D   +  + +A + +   M  + C                      
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--------------------- 392

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P+L   +T ++    + ++D     L +      L  +T  +N L
Sbjct: 393 ---------------PNLITFNTLIDGYCGAKRIDDGMELL-HEMTETGLVADTTTYNTL 436

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I      G L +A ++L+EM  S +  P+++T  TL+DGLC NG+ ++A+E+F+ M    
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 269 QIL----------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           + L          PD  TYN+LI G    GK   A+++ E M + G  P+   Y+++++G
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ +L EA ++FD M +    P+ + +TTLIN +C+AGRVD+ LEL  EM  RG  A+
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +T+  ++ G  + G I  AL + +++   G+Y +  + R +L     K EL++A+ +L
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 168/317 (52%), Gaps = 3/317 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P+   FN L+   C    +  A  +  +M ++    PN++T++TL++GLC+ GR  
Sbjct: 143 LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIV 201

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + M+ +D + P  +TY  ++DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 202 EAVALLDRMM-EDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSA 260

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++  CK+G+  +A+ +F EM+   + PD   Y ++I  FC +GR  +A +LL+EM ER 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+VT+N ++    +EGK  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +  LM  +G  P+  T N L+   C A   +D    L  + E G   ++ ++  L+   
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 495 CRGRKLLFAFELLDELV 511
                L  A +LL E++
Sbjct: 441 YLVGDLNAALDLLQEMI 457



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 158/307 (51%), Gaps = 14/307 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    S+ ++   + N++D A++   Y        PN   FN LI  +C    ++   E
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF-YLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM ++ +   +  TY+TLI G    G    A++L +EM+S   + PD +T + L+DG
Sbjct: 417 LLHEMTETGL-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDG 474

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L++G   EGK  EA+E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +    ++VTF  ++ G C+ 
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G++++ L +  ++   GI  N  +Y  ++    + G +  A+++ + M+  G  P   T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 453 NELLVRL 459
             +L  L
Sbjct: 655 RNMLTGL 661



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 205/447 (45%), Gaps = 37/447 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  +  +    +   AL++   + E      N   Y+ I+D L +  +      +  
Sbjct: 220 ITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 120 QMTYETCKFHEGIFLNLMKHFS---------NCSLHERVL-EMFHKIHPITREKPSLKAI 169
           +M        +GIF +L  + S           S  E++L EM  +     +  P +   
Sbjct: 280 EMQ------EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-----KISPDVVTY 328

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           +  +N  ++  +   A+    Y     R + PNT  ++ +I   CK+  L++A  +   M
Sbjct: 329 NALINAFVKEGKFFEAEEL--YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
                S PNLIT++TLIDG C   R  + +EL  EM ++  ++ D  TYN LI GF   G
Sbjct: 387 ATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEM-TETGLVADTTTYNTLIHGFYLVG 444

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL--------- 339
            ++ A  +++ M ++G  P++    TL++G C  GKL++A E+F  M+            
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 340 --LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             ++PD   Y  LI+     G+  EA EL +EM  RG   D +T++ ++ GLC++ +++E
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  M + +       N  ++  ++N  C+ G ++  +EL   M  RG + +  T   L+ 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPES 484
              K G    A      ++  G  P++
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 37/294 (12%)

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +AI+LF +M+ + + LP  + +  L+    R  + D    + + M+      +++++T
Sbjct: 60  LEDAIDLFSDML-RSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+  FC   KL  A   F ++    L PD + + TL++  C   RV EAL L  +M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            C+ ++VTF  ++ GLCREG+I EA+ +L+++  DG+   + +Y  +++  C+ G+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSA 238

Query: 434 IELLRLM-------------------LC-----------------RGFLPHYATSNELLV 457
           ++LLR M                   LC                 +G  P   T N ++V
Sbjct: 239 LDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             C +G   DA   L  ++E    P+  ++  L+    +  K   A EL DE++
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 94/196 (47%)

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L +GF +   L++A ++F +M      P  + +  L+    R  R D  + L ++M+ + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + DI +F I++   C   K+  AL    K+   G++ +  ++  +L+  C +  + +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L   M      P+  T   L+  LC+ G   +A   L  ++E G +P   ++  +V+ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 495 CRGRKLLFAFELLDEL 510
           C+    + A +LL ++
Sbjct: 230 CKIGDTVSALDLLRKM 245


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 176/310 (56%), Gaps = 2/310 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   ++IL+   CK G + SA  +L+EM+K   + PN++TY+ ++   CKNG + +  
Sbjct: 343 QPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFA-PNVVTYTIVLHSFCKNGMWDDTR 401

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L EEM +K   L ++  YN +I   C+ G++D A  +++ M++ GCNP++ +Y T++  
Sbjct: 402 ALLEEMSAKGLTL-NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C   +++EA+ +F+ +    +  + I Y T+I+   R GR  +A+ L KEM   GC  D
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +V++N ++  +C++G ++ +L +LE++   GI  N  SY I+++  C++  +  A+EL +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            ML +G  P   T N L+  LCK G    A   L  L      P+  ++ +L+   C+ R
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR 640

Query: 499 KLLFAFELLD 508
            L  A  LL+
Sbjct: 641 LLDDAAMLLN 650



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 168/312 (53%), Gaps = 6/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +  L++  C+    + A  +L  + +      N++ ++T+I G    G+  EA E
Sbjct: 278 PGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-----NVVLFNTVIGGCLAEGKLAEATE 332

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+E M  K    PDA TY++L+ G C+ G++  A +++  M+  G  PNV  YT +++ F
Sbjct: 333 LYETMGLKG-CQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSF 391

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G   + + + +EM    L  ++ GY  +I   C+ GR+DEA+ L++EM+ +GC  DI
Sbjct: 392 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 451

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            ++N I+  LC   ++EEA  M E L  +G+  N  +Y  +++   + G  + A+ L + 
Sbjct: 452 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 511

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G      + N L+  +CK G  + + + L  + E G KP + S+ +L+  +C+ R+
Sbjct: 512 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571

Query: 500 LLFAFELLDELV 511
           +  A EL  +++
Sbjct: 572 VRDALELSKQML 583



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 148/326 (45%), Gaps = 5/326 (1%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A + L    +   ++P+   +N+++    +      A  + + M       P   T+   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
              LC+ GR  EA+ L   M ++   +PDA+ Y  +I   C  G V  A  ++  M   G
Sbjct: 182 ARALCRLGRANEALALLRGM-ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C  +V  +  ++ G C  G+++EA  + D M      P  + Y  L+   CR  + DEA 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            +L  + E     ++V FN ++GG   EGK+ EA  + E +   G   +  +Y I+++  
Sbjct: 301 AMLGRVPE----LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G +  A+ LLR M  +GF P+  T   +L   CK GM +D    L  +   G    S
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
             +  ++  +C+  ++  A  L+ E+
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEM 442



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 156/321 (48%), Gaps = 45/321 (14%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+KGF  N  TY  +L    +   ++   A+L +M+ +      G+ LN           
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK------GLTLNS---------- 416

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTC 203
                               +  +  +  L +  ++D A   +    Q +R +   P+ C
Sbjct: 417 --------------------QGYNGMIYALCKDGRMDEAMGLI----QEMRSQGCNPDIC 452

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N +I H C    +E A  + + + +  +   N ITY+T+I  L ++GR+++A+ L +E
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGV-VANGITYNTIIHALLRDGRWQDAVRLAKE 511

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+     L D ++YN LI   C+ G VDR+  ++E M   G  PN  +Y  L++  CKE 
Sbjct: 512 MILHGCSL-DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKER 570

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++++A E+  +M N  L PD + Y TLIN  C+ G +  AL LL+++       DI+T+N
Sbjct: 571 RVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYN 630

Query: 384 IILGGLCREGKIEEALGMLEK 404
           I++   C+   +++A  +L +
Sbjct: 631 ILISWHCKVRLLDDAAMLLNR 651


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 208/427 (48%), Gaps = 46/427 (10%)

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           T ETC     +FL L +  +   L+    EMF       R K S+   +  +N+L +  +
Sbjct: 185 TIETCNSLLSLFLKLNRTEAAWVLYA---EMFR-----LRIKSSVYTFNIMINVLCKEGK 236

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           +  A++F+ +      +KPN   +N ++  +C  G +E+A  +L  MK+ ++  P+  TY
Sbjct: 237 LKKAKDFVGHMETS-GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE-PDSFTY 294

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM- 300
            +LI G+CK GR  EA ++FEEMV K  + P A+ YN LIDGFC  G +D A    + M 
Sbjct: 295 GSLISGMCKQGRLEEASKIFEEMVQKG-LRPSAVIYNTLIDGFCNKGNLDMASAYKDEML 353

Query: 301 ----------------------------------KNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                                             +  G +P+   Y  L+NG+C+    +
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAK 413

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A  + DEM    +KP    YT+L++   +  R+ EA +L K++   G   D++ FN ++
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C    ++ A  +L+ +    +  ++ ++  ++   C++G++E+A EL   M  RG  
Sbjct: 474 DGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIK 533

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P + + N L+    + G  +DA      +++ GF P   ++  LV+ +C+ ++   A EL
Sbjct: 534 PDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEEL 593

Query: 507 LDELVIK 513
           L E+V K
Sbjct: 594 LKEMVSK 600



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 197/383 (51%), Gaps = 12/383 (3%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNF 188
           +F  L+K   + +  +   E F+ +    +EK  L  I TC   L+L ++ N+ + A  +
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTM----KEKGVLPTIETCNSLLSLFLKLNRTEAA--W 206

Query: 189 LKYSNQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           + Y+    LR+K +   FNI+I   CK G L+ A + +  M+ S +  PN++TY+T++ G
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVK-PNIVTYNTIVHG 265

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C +GR   A  +   M  + +I PD+ TY  LI G C+ G+++ A KI E M   G  P
Sbjct: 266 YCSSGRVEAADAILTTM-KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y TL++GFC +G L  A    DEM    + P    Y +LI+      R DEA  ++
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           KE++E+G   D +T+NI++ G CR    ++A  + +++   GI   K +Y  +L+   +K
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
             +++A +L + +   G LP     N L+   C     + A   L  +  M   P+  ++
Sbjct: 445 NRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504

Query: 488 ALLVELICRGRKLLFAFELLDEL 510
             +++  CR  K+  A EL DE+
Sbjct: 505 NTIMQGHCREGKVEEARELFDEM 527



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 2/299 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+  I+N LI   C +G L+ A     EM K  +S P + TY++LI  L    R  EA
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGIS-PTMSTYNSLIHALFMEQRTDEA 380

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + +E+  K  I PDA+TYN+LI+G+CR     +A  + + M  +G  P    YT+L++
Sbjct: 381 ECMIKEIQEKG-ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              K+ +++EA ++F ++ +  + PD I +  LI+  C    V  A ELLK+M       
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VTFN I+ G CREGK+EEA  + +++   GI  +  S+  +++   ++G+++ A  + 
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             ML  GF P   T N L+  LCK    + A   L  +V  G  P+  ++  L+E I +
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 183/384 (47%), Gaps = 10/384 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N  TY TI+       + EA DA+L  M  +  +     + +L+         
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRL 307

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTC 203
           E   ++F ++  + +  +PS    +T ++       +D+A     Y ++ L+  + P   
Sbjct: 308 EEASKIFEEM--VQKGLRPSAVIYNTLIDGFCNKGNLDMAS---AYKDEMLKKGISPTMS 362

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N LI         + A  ++KE+++  +S P+ ITY+ LI+G C+    ++A  L +E
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGIS-PDAITYNILINGYCRCANAKKAFLLHDE 421

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M++   I P   TY  L+    +  ++  A  + + + + G  P+V  +  L++G C   
Sbjct: 422 MLASG-IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNS 480

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A E+  +M    + PD + + T++   CR G+V+EA EL  EMK RG K D ++FN
Sbjct: 481 NVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFN 540

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G  R G I++A  +  ++   G      +Y  ++   C+  E + A ELL+ M+ +
Sbjct: 541 TLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSK 600

Query: 444 GFLPHYATSNELLVRLCKAGMAED 467
           G  P   T   L+  + K  + ++
Sbjct: 601 GMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 174/363 (47%), Gaps = 20/363 (5%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI-------------LIK 210
           PSL  IS  L  L ES QV L  +FL + +  L      C+  +             L+K
Sbjct: 66  PSL--ISQTLLNLHESPQVVL--DFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLK 121

Query: 211 HHCKRGTLESAFEVLKEMKKSQ--MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
                GT  S  E+ + +  S+  + + + I +  LI   C   R  EA E F  M  K 
Sbjct: 122 QALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKG 181

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LP   T N L+  F +  + + A  +   M       +V+ +  ++N  CKEGKL++A
Sbjct: 182 -VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKA 240

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           K+    M+   +KP+ + Y T+++ +C +GRV+ A  +L  MK +  + D  T+  ++ G
Sbjct: 241 KDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISG 300

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +C++G++EEA  + E++   G+  +   Y  +++  C KG L+ A      ML +G  P 
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPT 360

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            +T N L+  L      ++A   +  + E G  P++ ++ +L+   CR      AF L D
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420

Query: 509 ELV 511
           E++
Sbjct: 421 EML 423



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 7/232 (3%)

Query: 287 GGKVDRAKKIMEFMKNN----GCNPN-VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           GG  +  ++I EF+  +    G   + VF+Y  L+   C   +  EA E F  MK   + 
Sbjct: 126 GGTTNSIREIFEFLAASRDRLGFKSSIVFDY--LIKSCCDMNRADEAFECFYTMKEKGVL 183

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P      +L++ F +  R + A  L  EM     K+ + TFNI++  LC+EGK+++A   
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           +  +   G+  N  +Y  +++  C  G +E A  +L  M  +   P   T   L+  +CK
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G  E+A+     +V+ G +P +  +  L++  C    L  A    DE++ K
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK 355


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 160/298 (53%), Gaps = 12/298 (4%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  LI   CK    + A  V +++       P+++TYS LIDGLCK GR +EAI+
Sbjct: 87  PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR-PDVVTYSCLIDGLCKEGRLKEAID 145

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF  M+     +P+ +TYN LI GFCR GK+D A  ++E M   G +P+V  YTTLMNGF
Sbjct: 146 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 205

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  +L +A ++ ++M    L P+ + +T+L++  CR  R+ +A+ +L EM+ + C   +
Sbjct: 206 CKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 265

Query: 380 VTFNIILGGLCREGKIEEALG-MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            T+N IL G CR  ++EEA   MLE++       N  S+ I++   C+     +A+EL+ 
Sbjct: 266 YTYNTILDGYCRVNQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVE 322

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV-EMGFKPES------DSWAL 489
               R   P       ++  LC+    ++A      ++ E G  P S      D W L
Sbjct: 323 EARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTFDYWPL 380



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 164/311 (52%), Gaps = 9/311 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY +++  L + ++      +L +M Y  C      +  L+  F      +  L +F ++
Sbjct: 56  TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115

Query: 157 HPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
             + R  +P +   S  ++ L +  ++  A +      +     PNT  +N LI   C+ 
Sbjct: 116 --VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM 173

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G ++ A  +L+ M ++  S P+++TY+TL++G CK  R  +A +L  +M  K  + P+ +
Sbjct: 174 GKMDEAMNLLERMAETGSS-PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG-LTPNVV 231

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE-VFDE 334
           T+  L+DG CR  ++  A  I+  M+   C+P V+ Y T+++G+C+  +L+EA++ + +E
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE 291

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M      P+ + +  +I   C+  R  EA+EL++E + R C  D+V +  ++  LCRE K
Sbjct: 292 MD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348

Query: 395 IEEALGMLEKL 405
           ++EA  +  K+
Sbjct: 349 VDEACRVYRKM 359



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 129/237 (54%), Gaps = 1/237 (0%)

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V   + +P A+TYN LI G C+  +   A  ++E M  +GC P++F YTTL+ GFCK  K
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG-CKADIVTFN 383
             +A  VF+++     +PD + Y+ LI+  C+ GR+ EA++L   M + G C  + VT+N
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G CR GK++EA+ +LE++   G   +  +Y  ++N  C+   L+ A +LL  M  +
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           G  P+  T   L+  LC+     DA   L  +      P   ++  +++  CR  +L
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQL 281



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 112/205 (54%), Gaps = 1/205 (0%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P    Y +L++G CK  +  EA ++ +EM      PD   YTTLI  FC++ + D+AL +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL-NKASYRIVLNFSC 425
            +++  RG + D+VT++ ++ GLC+EG+++EA+ +  ++   G  + N  +Y  +++  C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G++++A+ LL  M   G  P   T   L+   CK    +DA   L  +   G  P   
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 486 SWALLVELICRGRKLLFAFELLDEL 510
           ++  L++ +CR  +L  A  +L E+
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEM 256



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 103/190 (54%), Gaps = 11/190 (5%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +Q+A+EV          P  + Y +LI+  C+A R  EA +LL+EM   GC  DI T+  
Sbjct: 45  VQDAEEV----------PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 94

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+  K ++AL + E+L   G   +  +Y  +++  C++G L++AI+L   M+  G
Sbjct: 95  LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154

Query: 445 F-LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             +P+  T N L+   C+ G  ++A   L  + E G  P+  ++  L+   C+  +L  A
Sbjct: 155 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 214

Query: 504 FELLDELVIK 513
           ++LL+++  K
Sbjct: 215 YDLLNQMTRK 224



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/168 (20%), Positives = 77/168 (45%), Gaps = 7/168 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++ N ++ +KG   N  T+ +++D L R  +      +L +M  ++C      +  ++
Sbjct: 214 AYDLLNQMT-RKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 272

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
             +  C +++  LE   K      +  P++ + +  +  L + N+   A   ++ + +  
Sbjct: 273 DGY--CRVNQ--LEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR- 327

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           R  P+  ++  +I   C+   ++ A  V ++M +     PN ITYST 
Sbjct: 328 RCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 203/412 (49%), Gaps = 32/412 (7%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F +L+ HFS  +L   +L +F  ++      P+    +  +  L     +  AQ +L   
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            +    +P+   FN LI  +C+   L+ A ++  +M     S  + ++Y+ LI+G C+ G
Sbjct: 156 VRS-GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQ-DAVSYAALIEGFCETG 213

Query: 253 RFREAIELFEEMVSKDQILPDALT------------------------------YNVLID 282
           R  EA+ELF E+   D     AL                               Y  L+D
Sbjct: 214 RVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVD 273

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            +CR  K + A+K++  M +NG  P     T ++N +C+EG++  A  VF+ MK    +P
Sbjct: 274 LWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEP 333

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +   Y  ++  FC  G+V +A+ LL +M+E G + D+VT+N+++ G C +G IE A  +L
Sbjct: 334 NVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLL 393

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +  +G+  ++ +Y ++++  C+ G++++A  L   +  RG  P+  T N ++  LCK 
Sbjct: 394 RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKG 453

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           G  + A   L  +V  G  P++ +++  +E +C+ +        +DE++ K+
Sbjct: 454 GKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD 505



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 199/433 (45%), Gaps = 8/433 (1%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
           L +F  +          ATY  ++  L R          L  M     +     F +L+ 
Sbjct: 113 LRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
            +      +   ++F K+ P+        + +  +    E+ +VD A    +   Q    
Sbjct: 173 GYCRTQQLDVAQDLFDKM-PLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ---- 227

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+      L+K  C     E    +L++MK+     P    Y+ L+D  C+  +  EA 
Sbjct: 228 -PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWR-PATRAYAALVDLWCREQKAEEAE 285

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ++  EM   + ++P A+T   +++ +CR G++  A ++ E MK  GC PNV+ Y  ++ G
Sbjct: 286 KMLNEMFD-NGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQG 344

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FC  GK+ +A  + D+M+   ++PD + Y  LI   C  G ++ A  LL+ M+  G  AD
Sbjct: 345 FCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAAD 404

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+N+++  LC+ GK++EA  + + L Y GI  N  ++  V+N  C+ G+ + A   L 
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLE 464

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G  P   T +  +  LCK   + +    +  +++   KP + ++ ++++ + + R
Sbjct: 465 KMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKER 524

Query: 499 KLLFAFELLDELV 511
               A  +  ++V
Sbjct: 525 NYGLATRIWGQMV 537



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 139/254 (54%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+   +N+LI+  C  G +ESAF +L+ M+ + ++  +  TY+ LID LCK G+  EA
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLA-ADQYTYNVLIDALCKTGKVDEA 424

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+ +  +  I P+++T+N +I+G C+GGK D A   +E M + GC P+ + Y+  + 
Sbjct: 425 CSLFDGLEYRG-IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIE 483

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK    +E     DEM    +KP T+ YT +I+   +      A  +  +M   GC  
Sbjct: 484 NLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSP 543

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT+   +   C EG++ EA  ++ ++   GI ++  +Y  +++     G+ + A+ +L
Sbjct: 544 DVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTIL 603

Query: 438 RLMLCRGFLPHYAT 451
           + M     +P++ T
Sbjct: 604 KHMTGVASMPNHFT 617



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/406 (22%), Positives = 189/406 (46%), Gaps = 12/406 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF+ +  +YA +++      + +    + R++       H      L+K   +    E 
Sbjct: 193 RGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAA----LVKGLCDARRGEE 248

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFN 206
            L M  K+  +   +P+ +A +  ++L     + + A+  L   + N    L P      
Sbjct: 249 GLYMLQKMKELGW-RPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG---LVPCAVTCT 304

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            ++  +C+ G +  A  V + MK      PN+ TY+ ++ G C  G+  +A+ L ++M  
Sbjct: 305 AVVNAYCREGRMSGAVRVFESMKLKGCE-PNVWTYNAMVQGFCNVGKVYKAMALLDQM-R 362

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  + PD +TYN+LI G C  G ++ A +++  M+ NG   + + Y  L++  CK GK+ 
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +FD ++   ++P+++ + T+IN  C+ G+ D A   L++M   GC  D  T++  +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC+     E L  ++++    +  +  +Y IV++   ++     A  +   M+  G  
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS 542

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           P   T    +   C  G   +A   +  + + G   ++ ++  L++
Sbjct: 543 PDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLID 588



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 159/375 (42%), Gaps = 54/375 (14%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           ++ L ++ +VD A +      ++  ++PN+  FN +I   CK G  + A   L++M  + 
Sbjct: 412 IDALCKTGKVDEACSLFD-GLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            + P+  TYS  I+ LCK    RE +   +EM+ KD + P  + Y ++ID   +      
Sbjct: 471 CA-PDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD-VKPSTVNYTIVIDRLFKERNYGL 528

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A +I   M + GC+P+V  YTT +  +C EG+L EA+ V  EMK   +  D + Y TLI+
Sbjct: 529 ATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLID 588

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNI---------------------------- 384
                G+ D A+ +LK M       +  TF I                            
Sbjct: 589 GHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELA 648

Query: 385 -----------------------ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
                                  IL G   E +++E   ++  +  D + LN+  Y  ++
Sbjct: 649 DVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLV 708

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N  C+      A  LL  M+  GFLP+  +   LL      G A+ A     GL    + 
Sbjct: 709 NCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYN 768

Query: 482 PESDSWALLVELICR 496
            +   W ++++ + R
Sbjct: 769 TDEIVWKIIIDGLIR 783



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 124/313 (39%), Gaps = 56/313 (17%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+T  + I+I    K      A  +  +M     S P+++TY+T +   C  GR  EA
Sbjct: 506 VKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS-PDVVTYTTSVRAYCNEGRLHEA 564

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN------ 311
             +  EM  K  I+ DA+ YN LIDG    GK D A  I++ M      PN F       
Sbjct: 565 ENVVMEM-KKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLR 623

Query: 312 ---------------------------------------------YTTLMNGFCKEGKLQ 326
                                                        Y  ++ GF +E +L 
Sbjct: 624 HLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLD 683

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           E   +   MK   L  +   YT+L+NCFC+     +A  LL  M   G   +++++  +L
Sbjct: 684 EVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLL 743

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE---KAIELLRLMLCR 443
            G   EG+ + A  +   L +     ++  ++I+++   ++G  +     I +L  M C+
Sbjct: 744 SGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCK 803

Query: 444 GFLPHYATSNELL 456
                YA   E L
Sbjct: 804 PSDETYAMLTEEL 816


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 185/333 (55%), Gaps = 3/333 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           K S+   +  L+ L +S ++D A   L +  + + LKP+   +++LI   CKRG +E A 
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAV-ILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+ +EM   ++ YPN    S +I GL + G   EA +++ + V+K  +  + + YN++ID
Sbjct: 466 ELYEEMCSKRI-YPNSFVCSAIISGLFEKGAISEA-QMYFDSVTKSDVAEEIILYNIMID 523

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+ + G +  A +  + +   G +P +  + +L+ GFCK+GKL EA ++ D +K   L P
Sbjct: 524 GYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP 583

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
            ++ YTTL+N +C  G +    ++L EM+ +  K   +T+ +++ GLC+EG++ E++ +L
Sbjct: 584 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 643

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + ++  G++ ++ +Y  V+   C+  +L+KA +L   ML     P   T N L+  LC  
Sbjct: 644 KYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVY 703

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           G  +DA   L  L +   +    ++  +++  C
Sbjct: 704 GNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 736



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 171/314 (54%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   + ILI  HC+ G +E +F+ LKE   SQ    +++TY+ L+  LCK+GR  EA
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFK-LKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L  EM     + PD LTY+VLI G C+ G V+ A ++ E M +    PN F  + +++
Sbjct: 430 VILLHEM-EVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 488

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  ++G + EA+  FD +    +  + I Y  +I+ + + G + EA+   K++ E+G   
Sbjct: 489 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 548

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            IVTFN ++ G C++GK+ EA+ +L+ +   G+     +Y  ++N  C++G++    ++L
Sbjct: 549 TIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDML 608

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +   P   T   ++  LCK G   ++   L  +   G  P+  ++  +++  C+ 
Sbjct: 609 HEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKA 668

Query: 498 RKLLFAFELLDELV 511
             L  AF+L ++++
Sbjct: 669 HDLQKAFQLHNQML 682



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 166/311 (53%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FN L+   CK G+++ A      M K  +  P++ +Y+ L+ GLC  G   EA+E
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGL-LPDVYSYNILLHGLCVAGSMEEALE 326

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              +M     + PD +TYN+L +GF   G +  A K+++ M  NG NP++  YT L+ G 
Sbjct: 327 FTNDM-ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGH 385

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G ++E+ ++ ++M +  LK   + YT L++  C++GR+DEA+ LL EM+  G K D+
Sbjct: 386 CQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDL 445

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+++++ GLC+ G +EEA+ + E++    IY N      +++   +KG + +A      
Sbjct: 446 LTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 505

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +            N ++    K G   +A  +   ++E G  P   ++  L+   C+  K
Sbjct: 506 VTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGK 565

Query: 500 LLFAFELLDEL 510
           L  A +LLD +
Sbjct: 566 LAEAVKLLDTI 576



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 201/411 (48%), Gaps = 28/411 (6%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF H+  ++  +   +AR  + + +  VL QM  E           L+
Sbjct: 98  ALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELL 157

Query: 138 -KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ-NFLKYSNQH 195
              F +  L+  V +M    +  +R +    A+     + + + QV +A  N L Y+ +H
Sbjct: 158 CNSFRDWDLNNVVWDMLACAY--SRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRH 215

Query: 196 LRLKPNTCIFN---------------ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
             +  +  ++N               ILI   C++  L+ A   L+E    +   P++++
Sbjct: 216 TDIMWD--VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFG-PSVVS 272

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           ++ L+ G CK G    A   F  M+ K  +LPD  +YN+L+ G C  G ++ A +    M
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMI-KYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDM 331

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           +N+G  P++  Y  L NGF   G +  A +V   M    L PD + YT LI   C+ G +
Sbjct: 332 ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNI 391

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           +E+ +L ++M  +G K  IVT+ ++L  LC+ G+I+EA+ +L ++   G+  +  +Y ++
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVL 451

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
           ++  C++G +E+AIEL   M  +   P     N  +     +G+ E  AI+
Sbjct: 452 IHGLCKRGAVEEAIELYEEMCSKRIYP-----NSFVCSAIISGLFEKGAIS 497



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 8/366 (2%)

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCI 204
           H RV   F   H + R+  S K +   LN ++E      A +  +      R    N  +
Sbjct: 113 HSRV-SWFIVSHVVARKGQS-KELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVV 170

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +++L   + +   +  A  VL +MK   +   ++ TY++L+     N R  + +      
Sbjct: 171 WDMLACAYSRAEMVHDALFVLAKMKVLNLQV-SIATYNSLL----YNLRHTDIMWDVYNE 225

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +    +  +  T  +LIDG CR  ++  A   +         P+V ++  LM+GFCK G 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  AK  F  M  + L PD   Y  L++  C AG ++EALE   +M+  G + DIVT+NI
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +  G    G I  A  +++++  +G+  +  +Y I++   CQ G +E++ +L   ML +G
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                 T   LL  LCK+G  ++A I L  +  +G KP+  ++++L+  +C+   +  A 
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 505 ELLDEL 510
           EL +E+
Sbjct: 466 ELYEEM 471



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 2/250 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P +  +  L+  +C+ G + S F++L EM+   +  P  ITY+ ++ GLCK GR  E+
Sbjct: 581 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK-PTQITYTVVVKGLCKEGRLHES 639

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L + M ++  + PD +TYN +I  FC+   + +A ++   M  +   P+   Y  L+N
Sbjct: 640 VQLLKYMYARG-LFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 698

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  G L++A  +   +++  ++   + YTT+I   C  G V  AL    +M ERG + 
Sbjct: 699 GLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEV 758

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            I  ++ ++  LC+   I +A      +   GI  ++    ++LN   + G+     E+ 
Sbjct: 759 SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIF 818

Query: 438 RLMLCRGFLP 447
            +M+  G LP
Sbjct: 819 AMMIKCGLLP 828


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 224/453 (49%), Gaps = 20/453 (4%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C K P  AL  F  ++ + G + +  T+ T+L  L    +      +  QM   TC+ + 
Sbjct: 127 CSKLP-FALSTFGKLT-KLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNF 188
             F  LM          R++E    +  +  +  +P+     T ++ + +      A N 
Sbjct: 185 VTFTTLMNGLCR---EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+   +   + PN  I++ +I   CK G    A  +  EM++  + +P+L TY+++I G 
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGF 300

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C +GR+ +A +L +EM+ + +I PD +TYN LI+ F + GK   A+++ + M   G  PN
Sbjct: 301 CSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
              Y+++++GFCK+ +L  A+ +F  M      P+ I + TLI+ +C A R+D+ +ELL 
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM E G  AD  T+N ++ G    G +  AL +L+++   G+  +  +   +L+  C  G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 429 ELEKAIELLRLML-----------CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
           +L+ A+E+ ++M              G  P   T N L+  L   G   +A      +  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P++ +++ +++ +C+  +L  A ++ D +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 220/461 (47%), Gaps = 53/461 (11%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  ++  + R ++ + V ++ ++M  +  +     F  L+K F +CS     L  F K+ 
Sbjct: 82  FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 141

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +    P +   +T L+ L   ++V  A N L +       +PN   F  L+   C+ G 
Sbjct: 142 KLGLH-PDVVTFNTLLHGLCVEDRVSEALN-LFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDG------------------------------ 247
           +  A  +L  M +  +  P  ITY T++DG                              
Sbjct: 200 IVEAVALLDRMMEDGLQ-PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258

Query: 248 ------LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                 LCK+GR  +A  LF EM  K  I PD  TYN +I GFC  G+   A+++++ M 
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
               +P+V  Y  L+N F KEGK  EA+E++DEM    + P+TI Y+++I+ FC+  R+D
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  +   M  +GC  +++TFN ++ G C   +I++ + +L ++   G+  +  +Y  ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM--- 478
           +     G+L  A++LL+ M+  G  P   T + LL  LC  G  +D A+ +F +++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKD-ALEMFKVMQKSKK 496

Query: 479 ---------GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                    G +P+  ++ +L+  +    K L A EL +E+
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 177/359 (49%), Gaps = 48/359 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY++++D   +  + +A + +   M  + C                      
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS--------------------- 392

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P+L   +T ++    + ++D     L +      L  +T  +N L
Sbjct: 393 ---------------PNLITFNTLIDGYCGAKRIDDGMELL-HEMTETGLVADTTTYNTL 436

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I      G L +A ++L+EM  S +  P+++T  TL+DGLC NG+ ++A+E+F+ M    
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 269 QIL----------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           + L          PD  TYN+LI G    GK   A+++ E M + G  P+   Y+++++G
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ +L EA ++FD M +    P+ + +TTLIN +C+AGRVD+ LEL  EM  RG  A+
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +T+  ++ G  + G I  AL + +++   G+Y +  + R +L     K EL++A+ +L
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 168/317 (52%), Gaps = 3/317 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L P+   FN L+   C    +  A  +  +M ++    PN++T++TL++GLC+ GR  
Sbjct: 143 LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIV 201

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NGCNPNVFNYTT 314
           EA+ L + M+ +D + P  +TY  ++DG C+ G    A  ++  M+  +   PNV  Y+ 
Sbjct: 202 EAVALLDRMM-EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++  CK+G+  +A+ +F EM+   + PD   Y ++I  FC +GR  +A +LL+EM ER 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D+VT+N ++    +EGK  EA  + +++   GI  N  +Y  +++  C++  L+ A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            +  LM  +G  P+  T N L+   C A   +D    L  + E G   ++ ++  L+   
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 495 CRGRKLLFAFELLDELV 511
                L  A +LL E++
Sbjct: 441 YLVGDLNAALDLLQEMI 457



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 158/307 (51%), Gaps = 14/307 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    S+ ++   + N++D A++   Y        PN   FN LI  +C    ++   E
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF-YLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EM ++ +   +  TY+TLI G    G    A++L +EM+S   + PD +T + L+DG
Sbjct: 417 LLHEMTETGL-VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG-LCPDIVTCDTLLDG 474

Query: 284 FCRGGKVDRAKKIMEFMKN-----------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            C  GK+  A ++ + M+            NG  P+V  Y  L++G   EGK  EA+E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +EM +  + PDTI Y+++I+  C+  R+DEA ++   M  +    ++VTF  ++ G C+ 
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G++++ L +  ++   GI  N  +Y  ++    + G +  A+++ + M+  G  P   T 
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654

Query: 453 NELLVRL 459
             +L  L
Sbjct: 655 RNMLTGL 661



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 205/447 (45%), Gaps = 37/447 (8%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I++G  +  +  + +   AL +   + E      N   Y+ I+D L +  +      +  
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 120 QMTYETCKFHEGIFLNLMKHFS---------NCSLHERVL-EMFHKIHPITREKPSLKAI 169
           +M        +GIF +L  + S           S  E++L EM  +     +  P +   
Sbjct: 280 EMQ------EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-----KISPDVVTY 328

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           +  +N  ++  +   A+    Y     R + PNT  ++ +I   CK+  L++A  +   M
Sbjct: 329 NALINAFVKEGKFFEAEEL--YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
                S PNLIT++TLIDG C   R  + +EL  EM ++  ++ D  TYN LI GF   G
Sbjct: 387 ATKGCS-PNLITFNTLIDGYCGAKRIDDGMELLHEM-TETGLVADTTTYNTLIHGFYLVG 444

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL--------- 339
            ++ A  +++ M ++G  P++    TL++G C  GKL++A E+F  M+            
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 340 --LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             ++PD   Y  LI+     G+  EA EL +EM  RG   D +T++ ++ GLC++ +++E
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  M + +       N  ++  ++N  C+ G ++  +EL   M  RG + +  T   L+ 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIC 624

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPES 484
              K G    A      ++  G  P++
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 2/259 (0%)

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +AI+LF +M+ + + LP  + +  L+    R  + D    + + M+      +++++T
Sbjct: 60  LEDAIDLFSDML-RSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+  FC   KL  A   F ++    L PD + + TL++  C   RV EAL L  +M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            C+ ++VTF  ++ GLCREG+I EA+ +L+++  DG+   + +Y  +++  C+KG+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 434 IELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + LLR M      +P+    + ++  LCK G   DA      + E G  P+  ++  ++ 
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 493 LICRGRKLLFAFELLDELV 511
             C   +   A +LL E++
Sbjct: 299 GFCSSGRWSDAEQLLQEML 317



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 93/196 (47%)

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L +GF +   L++A ++F +M      P  + +  L+    R  R D  + L ++M+ + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + DI +F I++   C   K+  AL    KL   G++ +  ++  +L+  C +  + +A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            L   M      P+  T   L+  LC+ G   +A   L  ++E G +P   ++  +V+ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 495 CRGRKLLFAFELLDEL 510
           C+    + A  LL ++
Sbjct: 230 CKKGDTVSALNLLRKM 245


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 154/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKIDDA 214

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+++T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 215 NELFDEMLVKG-LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 273

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 274 GLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRL 333

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLCREG   +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 334 DDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 393

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 394 KEMQRDGHVPSVVTYNVLM 412



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRIAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 178

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+++ +TTLI+
Sbjct: 179 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLID 238

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 239 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKP 298

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C+ G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 299 DKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKML 358

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 359 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 396



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 148/261 (56%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 157 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDA 214

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 215 NELFDEMLVKGL-VPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 272

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CK+G L  A E    M     +
Sbjct: 273 YGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTR 332

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  CR G   +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 333 LDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 392

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 393 LKEMQRDGHVPSVVTYNVLMN 413



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 130/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN+  F  LI  HCK G ++ 
Sbjct: 192 QPDVYTYSVLINGLCKESKIDDANELF---DEMLVKGLVPNSVTFTTLIDGHCKNGRVDL 248

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TLI GLCK G  ++A  L +EM S   + PD +TY  L
Sbjct: 249 AMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAHHLIDEM-SMKGLKPDKITYTTL 306

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG   +A+++  EM +  L
Sbjct: 307 IDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGL 366

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 367 KPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSG 60

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIME-FMKNN---------------G 304
           L    L  GF R                  D  +K++E  MK                 G
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E KI++A  + +++   G+  N  ++  +++  
Sbjct: 181 RLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGH 240

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 300

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 301 ITYTTLIDGCCKDGDLDTAFE 321



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 39/230 (16%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N+ T+ T++D   +  + +    + +QM  ++                       
Sbjct: 224 KGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---------------------- 261

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                          P L   +T +  L +   +  A + +   +    LKP+   +  L
Sbjct: 262 --------------SPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK-GLKPDKITYTTL 306

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G L++AFE  K M +      +++ Y+ LI GLC+ G   +A ++  EM+S  
Sbjct: 307 IDGCCKDGDLDTAFEHRKRMIQENTRLDDVV-YTALISGLCREGXSVDAEKMLREMLSVG 365

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + PDA TY ++I+ FC+ G V +  K+++ M+ +G  P+V  Y  LMNG
Sbjct: 366 -LKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 127/299 (42%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  +L  +S LI    ++G  R+AIE +         +P  
Sbjct: 34  KGSASAVFAAIFETKGTQRS--DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVP-- 89

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E +           Y  L+ GF            ++E
Sbjct: 90  ---------------FDTCRKVLEHLMK-------LKYFKLVWGF------------YEE 115

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G 
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 175

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T   
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 235

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK G  + A      ++     P+  ++  L+  +C+   L  A  L+DE+ +K
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 294


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 170/317 (53%), Gaps = 1/317 (0%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            + L PN   F+ LI   CK G+++ AFE+L+EM +     PN+ T++ LIDGLCK G  
Sbjct: 291 QMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWK-PNVYTHTALIDGLCKKGWT 349

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  LF ++V  D   P+  TY  +I+G+C+  K++RA+ ++  MK  G  PN   YT 
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTC 409

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G CK G    A E+ D M      P+   Y  +I+  C+ GR  EA +LL+   + G
Sbjct: 410 LIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSG 469

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
             AD VT+ I++   CR+   ++AL +  +++  G+  +  +Y +++   C++ ++E++ 
Sbjct: 470 LHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESE 529

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +L    +  G LP   T   ++   C+ G    A      + + G KP+S ++  L+  +
Sbjct: 530 KLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGL 589

Query: 495 CRGRKLLFAFELLDELV 511
           C   KL  A +L + ++
Sbjct: 590 CNESKLDEACQLYETMI 606



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 180/392 (45%), Gaps = 9/392 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           ++ +Y  ++    R  +   VD  L+ M              ++  FS      R    F
Sbjct: 227 DSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYF 286

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKH 211
            K   +    P+L   S+ +N L +   +  A   L+   + +R   KPN      LI  
Sbjct: 287 KKWVQMGLN-PNLINFSSLINGLCKIGSIKQAFEMLE---EMVRKGWKPNVYTHTALIDG 342

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-I 270
            CK+G  E AF +  ++ +S    PN+ TY+ +I+G CK  +   A  L   M  K+Q +
Sbjct: 343 LCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRM--KEQGL 400

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +P+  TY  LIDG C+ G   RA ++M+ M   G  PN+F Y  +++G CK+G+  EA +
Sbjct: 401 VPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYK 460

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +        L  D + YT LI+ FCR     +AL +   M + G + D+ T+N+++   C
Sbjct: 461 LLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFC 520

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           R+ K+EE+  + E+    G+   K +Y  ++   C+ G +  AI+    M   G  P   
Sbjct: 521 RQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSI 580

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           T   L+  LC     ++A      +++ G  P
Sbjct: 581 TYGALISGLCNESKLDEACQLYETMIDNGLSP 612



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 166/348 (47%), Gaps = 42/348 (12%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A  FL   N    L   T +   +++   + G L+ A  ++ EM+   +     I  + +
Sbjct: 145 ATTFLNNDN----LDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARI-LNFV 199

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK---VDRAKKIM---E 298
           ID     G    A ++F+EM+ +  ++PD+ +Y +++ G+CR G+   VDR  K M    
Sbjct: 200 IDVALALGFVDYAEKVFDEMLDR-AVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERG 258

Query: 299 FMKNN-----------------------------GCNPNVFNYTTLMNGFCKEGKLQEAK 329
           +  +N                             G NPN+ N+++L+NG CK G +++A 
Sbjct: 259 YAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAF 318

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL-LKEMKERGCKADIVTFNIILGG 388
           E+ +EM     KP+   +T LI+  C+ G  ++A  L LK ++    K ++ T+  ++ G
Sbjct: 319 EMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMING 378

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C+E K+  A  +L ++   G+  N  +Y  +++  C+ G   +A EL+ LM   GF P+
Sbjct: 379 YCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPN 438

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             T N ++  LCK G   +A   L   ++ G   +  ++ +L+   CR
Sbjct: 439 IFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCR 486



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 5/208 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  +   + ILI   C++   + A  +   M K  +  P++ TY+ LI   C+  +  E+
Sbjct: 470 LHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQ-PDMHTYNVLIATFCRQKKVEES 528

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LFEE V    +LP   TY  +I G+CR G +  A K    M++ GC P+   Y  L++
Sbjct: 529 EKLFEEAVGLG-LLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALIS 587

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C E KL EA ++++ M +  L P  +   TL   +C+ G    A+ +L+ +++   K 
Sbjct: 588 GLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEK---KL 644

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKL 405
            I T N ++  LC E K+  A     KL
Sbjct: 645 WIRTVNTLIRKLCSEKKVGVAALFFHKL 672



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 7/242 (2%)

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGC--NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           ++  F   GK+  A  ++  M+N+G      + N+  +++     G +  A++VFDEM +
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNF--VIDVALALGFVDYAEKVFDEMLD 221

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             + PD+  Y  ++  +CR GR+ +    LK+M ERG   D  T  +++     +G +  
Sbjct: 222 RAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNR 281

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A    +K    G+  N  ++  ++N  C+ G +++A E+L  M+ +G+ P+  T   L+ 
Sbjct: 282 AFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341

Query: 458 RLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
            LCK G  E A      LV    +KP   ++  ++   C+  KL  A  LL  + +KE G
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLL--IRMKEQG 399

Query: 517 TI 518
            +
Sbjct: 400 LV 401



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 123/296 (41%), Gaps = 44/296 (14%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++GF  N  TY  I+D L +  +F     +LR+         +  +  L+  F   + ++
Sbjct: 432 KEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNK 491

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           + L +F ++  +                                      L+P+   +N+
Sbjct: 492 QALAIFSRMFKVG-------------------------------------LQPDMHTYNV 514

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   C++  +E + ++ +E     +  P   TY+++I G C++G    AI+ F +M  +
Sbjct: 515 LIATFCRQKKVEESEKLFEEAVGLGL-LPTKETYTSMICGYCRDGHISSAIKFFHKM--R 571

Query: 268 DQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           D    PD++TY  LI G C   K+D A ++ E M +NG +P      TL   +CK+G   
Sbjct: 572 DYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSA 631

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            A  + + ++  L         TLI   C   +V  A     ++ ++    D +T 
Sbjct: 632 TAMIILERLEKKLWIRTV---NTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITL 684


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 167/287 (58%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNXMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  + +++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 153/299 (51%), Gaps = 19/299 (6%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  J E K +Q+S  ++  +S LI    ++G  R+AIE +         L   
Sbjct: 45  KGSASAVFAAJLETKGTQIS--DIYVFSGLITAYLESGFLRDAIECYR--------LTKE 94

Query: 275 LTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQ 326
             + V  D  CR       K+   K +  F + +   G   +++ +  LM+ F KEG+++
Sbjct: 95  HKFRVPFDT-CRKVJEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIR 153

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+ VFD +  + L+P  + + TL+N + + G +DE   L   M+  G + D+ T+++++
Sbjct: 154 LAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLI 213

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+E K+++A  + +++  +G+  N  ++  +++  C+ G ++ A+E+ + ML +   
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           P   T N L+  LCK G  + A      +   G KP+  ++  L++  C+   L  AFE
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFE 332


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 171/307 (55%), Gaps = 5/307 (1%)

Query: 194 QHLRL---KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           +H+++   +P+  I+N ++   CK   +  A  +  +MK + +  P ++TY++LI GL  
Sbjct: 220 EHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGI-LPTVVTYTSLIHGLRN 278

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            GR++EA  L  EM     I+PD + ++VLID  C+ G+V  A+ I++ M   G  P+V 
Sbjct: 279 LGRWKEAFGLLNEM-KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVA 337

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y TLMNG+C   ++ EA++VF+ M +    PD   ++ L+N +C+A R+DEA +L  EM
Sbjct: 338 TYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEM 397

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             RG   D V++N ++ GLC+  +  EA  + + +  +G   N  +Y I+L+   ++G L
Sbjct: 398 THRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYL 457

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           ++A+ L R M   G  P   T N ++  +CK G  +DA      L   G +P +      
Sbjct: 458 DQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPT 517

Query: 491 VELICRG 497
           ++ +C+G
Sbjct: 518 IDGVCKG 524



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 172/306 (56%), Gaps = 2/306 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
             ILI   C+   ++  F VL ++ K  +  PN+IT+STLI+G C  G+   AIELF+ M
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLE-PNVITFSTLINGFCIEGKIGRAIELFDVM 187

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V++    P+  +Y+++I G CR GK     K++E MK  GC P+V  Y T+++  CK+  
Sbjct: 188 VARGY-KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  +F +MK   + P  + YT+LI+     GR  EA  LL EMK      D+V F++
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSV 306

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  +C+EG++ EA  +L+ +   G+  + A+Y  ++N  C + E+ +A ++  +M+ +G
Sbjct: 307 LIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKG 366

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +P   + + L+   CKA   ++A      +   G  P++ S+  L+  +C+ R+ L A 
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426

Query: 505 ELLDEL 510
           EL  ++
Sbjct: 427 ELFKDM 432



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 193/391 (49%), Gaps = 40/391 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+F+ V   +G+  N  +Y+ I+  L R  K   V  +L  M    C+    I+  ++
Sbjct: 180 AIELFD-VMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIV 238

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  L    + +F K+                                     +   
Sbjct: 239 DRLCKDRLVNEAVHIFCKM-------------------------------------KGTG 261

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P    +  LI      G  + AF +L EMK   +  P+L+ +S LID +CK G   EA
Sbjct: 262 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNI-MPDLVAFSVLIDIMCKEGEVSEA 320

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + + M ++  + PD  TYN L++G+C   +V  A+K+ E M + G  P+VF+++ L+N
Sbjct: 321 RVILKTM-TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVN 379

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK  ++ EAK++FDEM +  L PDT+ Y TLI+  C+A R  EA EL K+M   G   
Sbjct: 380 GYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP 439

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++VT++I+L  L ++G +++A+G+   +   G+  +  +Y I+++  C+ G+ + A EL 
Sbjct: 440 NLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELF 499

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             +  +G  P+       +  +CK G+ ++A
Sbjct: 500 AELSVKGLQPNNWVCTPTIDGVCKGGLLDEA 530



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 170/316 (53%), Gaps = 4/316 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN   ++I+IK  C+ G      ++L+ MK      P+++ Y+T++D LCK+    EA+
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCE-PDVVIYNTIVDRLCKDRLVNEAV 251

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +F +M     ILP  +TY  LI G    G+   A  ++  MK     P++  ++ L++ 
Sbjct: 252 HIFCKM-KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKEG++ EA+ +   M    ++PD   Y TL+N +C    V EA ++ + M  +G   D
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + +F+I++ G C+  +I+EA  + +++ + G+  +  SY  +++  CQ     +A EL +
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK 430

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRG 497
            M   G+ P+  T + LL  L K G   D A+ LF  +E  G KP+  ++ ++++ +C+ 
Sbjct: 431 DMHSNGYPPNLVTYSILLDCLSKQGYL-DQAMGLFRAMENSGLKPDLVTYNIMIDGMCKY 489

Query: 498 RKLLFAFELLDELVIK 513
            K   A EL  EL +K
Sbjct: 490 GKFKDARELFAELSVK 505



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 143/278 (51%), Gaps = 1/278 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+++ +  L   L +   ++  + L ++M     I  D L+  +LI+ FCR   VD    
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQM-EMAGISHDVLSLTILINCFCRLCHVDYGFS 147

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   G  PNV  ++TL+NGFC EGK+  A E+FD M     KP+   Y+ +I   C
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R G+  E ++LL+ MK  GC+ D+V +N I+  LC++  + EA+ +  K+   GI     
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++     G  ++A  LL  M     +P     + L+  +CK G   +A + L  +
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            EMG +P+  ++  L+   C   +++ A ++ + ++ K
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISK 365



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 12/254 (4%)

Query: 250 KNGRFR---EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           KN  FR   +A+  F  MV+ +  LP  + +  L     R         + + M+  G +
Sbjct: 65  KNRTFRNINDALSAFNHMVNTNP-LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGIS 123

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +V + T L+N FC+   +     V  ++    L+P+ I ++TLIN FC  G++  A+EL
Sbjct: 124 HDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIEL 183

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M  RG K ++ +++II+ GLCR GK  E + +LE +   G   +   Y  +++  C+
Sbjct: 184 FDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCK 243

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV-EM---GFKP 482
              + +A+ +   M   G LP   T   L+  L   G  ++A    FGL+ EM      P
Sbjct: 244 DRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEA----FGLLNEMKGGNIMP 299

Query: 483 ESDSWALLVELICR 496
           +  ++++L++++C+
Sbjct: 300 DLVAFSVLIDIMCK 313



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 2/108 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   ++IL+    K+G L+ A  + + M+ S +  P+L+TY+ +IDG+CK G+F++A E
Sbjct: 439 PNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLK-PDLVTYNIMIDGMCKYGKFKDARE 497

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           LF E+  K  + P+       IDG C+GG +D A K    M+ + C+P
Sbjct: 498 LFAELSVKG-LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 85/174 (48%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F+ M N    P  + +  L +   R       + L K+M+  G   D+++  I
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   CR   ++    +L K+   G+  N  ++  ++N  C +G++ +AIEL  +M+ RG
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           + P+  + + ++  LC+ G   +    L  +  +G +P+   +  +V+ +C+ R
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDR 245


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 204/397 (51%), Gaps = 25/397 (6%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR----------YK 109
           +S+G  ++ +    E +CA+++   + E +    N   Y TI+D L +          Y 
Sbjct: 116 VSYGTLLNGLCKIGETRCAVKLLRMI-EDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           + +A       +TY T  +   +   LM  FS   L E +L+  +         P +   
Sbjct: 175 EMDARGIFPDAITYTTLIYGFCLLGQLMGAFS--LLDEMILKNIN---------PGVYIY 223

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +  +N L +   V  A+N L    +   +KP    ++ L+  +C  G +++A ++   M 
Sbjct: 224 NILINALCKEGNVKEAKNLLAVMTKE-GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV 282

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           +  ++ PN+ +Y+ +I+GLCK  R  EA+ L  EM+ K+ + PD +TYN LIDG C+ G+
Sbjct: 283 QMGVN-PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV-PDTVTYNSLIDGLCKSGR 340

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +  A  +M  M + G   +V  YT+L++  CK   L +A  +F +MK   ++P    YT 
Sbjct: 341 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 400

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI+  C+ GR+  A EL + +  +GC  D+ T+ +++ GLC+EG  +EAL +  K+  +G
Sbjct: 401 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 460

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
              N  ++ I++    +K E +KA +LL  M+ +G L
Sbjct: 461 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 188/352 (53%), Gaps = 5/352 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +P++   +T ++ L +   V+ A +   YS    R + P+   +  LI   C  G L  A
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDL--YSEMDARGIFPDAITYTTLIYGFCLLGQLMGA 204

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           F +L EM    ++ P +  Y+ LI+ LCK G  +EA  L   M +K+ I P  +TY+ L+
Sbjct: 205 FSLLDEMILKNIN-PGVYIYNILINALCKEGNVKEAKNLLAVM-TKEGIKPGVVTYSTLM 262

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG+C  G+V  AK+I   M   G NPNV++Y  ++NG CK  ++ EA  +  EM +  + 
Sbjct: 263 DGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 322

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PDT+ Y +LI+  C++GR+  AL L+ EM  RG  AD+VT+  +L  LC+   +++A  +
Sbjct: 323 PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATAL 382

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K+   GI     +Y  +++  C+ G L+ A EL + +L +G      T   ++  LCK
Sbjct: 383 FMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 442

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            GM ++A      + + G  P + ++ +++  +    +   A +LL E++ K
Sbjct: 443 EGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 494



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 172/355 (48%), Gaps = 41/355 (11%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGR 253
           L  +P+T   N L+K  C +G ++ +     ++  +  QM +   ++Y TL++GLCK G 
Sbjct: 74  LGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDH---VSYGTLLNGLCKIGE 130

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            R A++L   M+      P+ + YN +IDG C+   V+ A  +   M   G  P+   YT
Sbjct: 131 TRCAVKLLR-MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+ GFC  G+L  A  + DEM    + P    Y  LIN  C+ G V EA  LL  M + 
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K  +VT++ ++ G C  G+++ A  +   +   G+  N  SY I++N  C+   +++A
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 309

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAG--------MAE------------------- 466
           + LLR ML +  +P   T N L+  LCK+G        M E                   
Sbjct: 310 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 369

Query: 467 -------DAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                  D A ALF  + E G +P   ++  L++ +C+G +L  A EL   L++K
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 172/314 (54%), Gaps = 4/314 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           ++ N    NILI   C  G +  +F VL ++ K  + Y P+ IT +TL+ GLC  G  ++
Sbjct: 41  IRANFVTLNILINCFCHLGQMAFSFSVLGKILK--LGYQPDTITLNTLMKGLCLKGEVKK 98

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           ++   +++V++   + D ++Y  L++G C+ G+   A K++  +++    PNV  Y T++
Sbjct: 99  SLHFHDKVVAQGFQM-DHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTII 157

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G CK+  + EA +++ EM    + PD I YTTLI  FC  G++  A  LL EM  +   
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNIN 217

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             +  +NI++  LC+EG ++EA  +L  +  +GI     +Y  +++  C  GE++ A ++
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQI 277

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M+  G  P+  + N ++  LCK    ++A   L  ++     P++ ++  L++ +C+
Sbjct: 278 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 337

Query: 497 GRKLLFAFELLDEL 510
             ++  A  L++E+
Sbjct: 338 SGRITSALNLMNEM 351



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 172/319 (53%), Gaps = 23/319 (7%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P   I+NILI   CK G ++ A  +L  M K  +  P ++TYSTL+DG C  G  + A
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK-PGVVTYSTLMDGYCLVGEVQNA 274

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F  MV    + P+  +YN++I+G C+  +VD A  ++  M +    P+   Y +L++
Sbjct: 275 KQIFHAMVQMG-VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 333

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G++  A  + +EM +     D + YT+L++  C+   +D+A  L  +MKERG + 
Sbjct: 334 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            + T+  ++ GLC+ G+++ A  + + L   G  ++  +Y ++++  C++G  ++A+ + 
Sbjct: 394 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIK 453

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD-SWALLVELICR 496
             M   G +P+ A + E+++R            +LF       K E+D +  LL E+I +
Sbjct: 454 SKMEDNGCIPN-AVTFEIIIR------------SLFE------KDENDKAEKLLHEMIAK 494

Query: 497 GRKLLFAFELLDELVIKES 515
           G  L+  F++ D  V  E+
Sbjct: 495 GL-LVLDFKVADVFVQNEN 512



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 108/207 (52%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  ++    K  +   A  +  +M+   ++ + +    LINCFC  G++  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ + G + D +T N ++ GLC +G+++++L   +K+   G  ++  SY  +LN  C+
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            GE   A++LLR++  R   P+    N ++  LCK  +  +A      +   G  P++ +
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  L+   C   +L+ AF LLDE+++K
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILK 214



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 96/225 (42%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P  + +N ++    +  +   A  + + M+  G   N      L+N FC  G++  +  V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             ++     +PDTI   TL+   C  G V ++L    ++  +G + D V++  +L GLC+
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G+   A+ +L  +       N   Y  +++  C+   + +A +L   M  RG  P   T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              L+   C  G    A   L  ++     P    + +L+  +C+
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCK 232


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 176/311 (56%), Gaps = 2/311 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   ++IL+   CK G + SA  +L+EM+K   + PN++TY+ ++   CKNG + +  
Sbjct: 343 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA-PNVVTYTIVLHSFCKNGMWDDTR 401

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L EEM +K   L ++  YN +I   C+ G++D A  +++ M++ GCNP++ +Y T++  
Sbjct: 402 ALLEEMSAKGLTL-NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C   +++EA+ +F+ +    +  + I Y T+I+   R GR  +A+ L KEM   GC  D
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +V++N ++  +C++G ++ +L +LE++   GI  N  SY I+++  C++  +  A+EL +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            ML +G  P   T N L+  LCK G    A   L  L      P+  ++ +L+   C+ R
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR 640

Query: 499 KLLFAFELLDE 509
            L  A  LL+ 
Sbjct: 641 LLDDAAMLLNR 651



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 168/312 (53%), Gaps = 6/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +  L++  C+    + A  +L  + +      N++ ++T+I G    G+  EA E
Sbjct: 278 PGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-----NVVLFNTVIGGCLAEGKLAEATE 332

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+E M  K    PDA TY++L+ G C+ G++  A +++  M+  G  PNV  YT +++ F
Sbjct: 333 LYETMGLKG-CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 391

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G   + + + +EM    L  ++ GY  +I   C+ GR+DEA+ L++EM+ +GC  DI
Sbjct: 392 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 451

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            ++N I+  LC   ++EEA  M E L  +G+  N  +Y  +++   + G  + A+ L + 
Sbjct: 452 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 511

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G      + N L+  +CK G  + + + L  + E G KP + S+ +L+  +C+ R+
Sbjct: 512 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571

Query: 500 LLFAFELLDELV 511
           +  A EL  +++
Sbjct: 572 VRDALELSKQML 583



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 31/321 (9%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  +L ++ +     P+  +Y+ ++  L +     +A+ L+  MV +D++ P   T+ V 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
               CR G+ D A  ++  M  +GC P+   Y T+++  C +G + EA  + +EM     
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR--------- 391
             D   +  ++   C  GRV EA  L+  M  +GC   ++T+  +L GLCR         
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 392 ----------------------EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
                                 EGK+ EA  + E +   G   +  +Y I+++  C+ G 
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +  A+ LLR M  +GF P+  T   +L   CK GM +D    L  +   G    S  +  
Sbjct: 362 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421

Query: 490 LVELICRGRKLLFAFELLDEL 510
           ++  +C+  ++  A  L+ E+
Sbjct: 422 MIYALCKDGRMDEAMGLIQEM 442



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 140/283 (49%), Gaps = 8/283 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+KGF  N  TY  +L    +   ++   A+L +M+ +    +   +  ++  ++ C   
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI--YALCK-D 429

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            R+ E    I  +  +   P + + +T +  L  + Q++ A++  +   +   +  N   
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE-GVVANGIT 488

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N +I    + G  + A  + KEM     S  ++++Y+ LI  +CK+G    ++ L EEM
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSL-DVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  I P+ ++YN+LI   C+  +V  A ++ + M N G  P++  Y TL+NG CK G 
Sbjct: 548 AEKG-IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +  A  + +++ N  + PD I Y  LI+  C+   +D+A  LL
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 209/396 (52%), Gaps = 45/396 (11%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
           HP  R +PS  +++  L+ L+ + +VDLA+   K + +  R+ P+   FNI+I   CK G
Sbjct: 143 HP--RHRPSAFSVNRLLSALVAAERVDLAERAFKAALRR-RVSPDLFTFNIVISGLCKTG 199

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN---GRFREAIELFEEMVSKDQILPD 273
            L  A +V K+++   ++ P+++TY+T+IDG CK    GR      L +EMV    I P+
Sbjct: 200 QLRKAGDVAKDIRAWGLA-PSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAG-ISPN 257

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +T+NVL++G+C+      A ++ E MK  G   +V  Y+ L+ G C EGK++E  ++ D
Sbjct: 258 EVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVD 317

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           EMK+  L P+     +++N FC+ G + +A   +  M+++  K ++VT+ I++ G  R  
Sbjct: 318 EMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLD 377

Query: 394 KIEEAL-----------------------------------GMLEKLWYDGIYLNKASYR 418
           K+++AL                                   G+L+++   G+  +  +Y 
Sbjct: 378 KMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYN 437

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           +++   C KGE+ KA++LL  ML  G  P + T N ++   C+ G  + +A  +   +E 
Sbjct: 438 VLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIK-SAYEIRTRMEK 496

Query: 479 GFKPES-DSWALLVELICRGRKLLFAFELLDELVIK 513
           G K  +  ++ + ++ +CR  K+    ELL+E++ K
Sbjct: 497 GKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEK 532



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 40/303 (13%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   FN+L+  +CK     +A  V +EMK+  ++  +++TYS L+ GLC  G+  E 
Sbjct: 254 ISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIA-ASVVTYSALVWGLCSEGKVEEG 312

Query: 258 IELFEEM----------------------------------VSKDQILPDALTYNVLIDG 283
           ++L +EM                                  + +  + P+ +TY +L+DG
Sbjct: 313 VKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDG 372

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           + R  K+  A  + E M   G  PN   Y  L+ GF + G  +    + DEM+   ++ D
Sbjct: 373 YRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRAD 432

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  LI   C  G V +A++LL EM   G +   +T+N I+ G C +G I+ A  +  
Sbjct: 433 IVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRT 492

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++       N  +Y + +   C+ G++E+  ELL  ML +G +P+  T + +     K G
Sbjct: 493 RMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI-----KEG 547

Query: 464 MAE 466
           M E
Sbjct: 548 MME 550



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 158/348 (45%), Gaps = 40/348 (11%)

Query: 90  GFNHNNATYATILD---KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF---SNC 143
           G   +  TY TI+D   K  R  +   VDA+L++M       +E  F  L+  +   SN 
Sbjct: 215 GLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNT 274

Query: 144 SLHERVLEMFHK--------------------------IHPITREK-----PSLKAISTC 172
           +   RV E   +                          +  +   K     P+L  +++ 
Sbjct: 275 AAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSV 334

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           LN   +   +  A+ ++  S +   +KPN   + IL+  + +   ++ A  V KE    +
Sbjct: 335 LNGFCKKGMMTDAEGWID-SMEQKNVKPNVVTYTILVDGYRRLDKMKDALAV-KEAMSGK 392

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
              PN   Y+ LI G  +NG +R    L +EM  K  +  D +TYNVLI   C  G+V +
Sbjct: 393 GVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG-VRADIVTYNVLIGALCVKGEVRK 451

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A K+++ M   G  P    Y T++NG+C++G ++ A E+   M+    + + + Y   I 
Sbjct: 452 AVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIK 511

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           C CR G+++E  ELL EM E+G   + VT++ I  G+  +G   +  G
Sbjct: 512 CLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVRG 559



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 131/247 (53%), Gaps = 9/247 (3%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P A + N L+       +VD A++  +       +P++F +  +++G CK G+L++A +V
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 332 FDEMKNFLLKPDTIGYTTLINCFC---RAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +++ + L P  + Y T+I+ +C   RAGR+     LLKEM E G   + VTFN+++ G
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C++     A+ + E++   GI  +  +Y  ++   C +G++E+ ++L+  M   G +P+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            AT N +L   CK GM  DA   +  + +   KP   ++ +LV+   R  K      + D
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDK------MKD 381

Query: 509 ELVIKES 515
            L +KE+
Sbjct: 382 ALAVKEA 388



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 45/256 (17%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C+K      E +    EQK    N  TY  ++D   R  K +   AV   M+ +  + + 
Sbjct: 339 CKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNA 398

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
            I+  L+  F+                         +++S  L+                
Sbjct: 399 RIYNCLIAGFT--------------------RNGDWRSVSGLLD---------------- 422

Query: 191 YSNQHLRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
                +R+K    +   +N+LI   C +G +  A ++L EM    +  P  +TY+T+I+G
Sbjct: 423 ----EMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLE-PVHLTYNTIING 477

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C+ G  + A E+   M  K +   + +TYNV I   CR GK++   +++  M   G  P
Sbjct: 478 YCEKGNIKSAYEIRTRM-EKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVP 536

Query: 308 NVFNYTTLMNGFCKEG 323
           N   Y T+  G  ++G
Sbjct: 537 NGVTYDTIKEGMMEKG 552


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 166/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I   M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+  +M  +    D++T+N ++ GLC++G +++A  + +++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 152/299 (50%), Gaps = 19/299 (6%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  J E K +Q+S  ++  +S LI    ++G  R+AIE +         L   
Sbjct: 45  KGSASAVFAAJLETKGTQIS--DIYVFSGLITAYLESGFLRDAIECYR--------LTKE 94

Query: 275 LTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQ 326
             + V  D  CR       K+   K +  F + +   G   +++ +  LM+ F KEG+++
Sbjct: 95  HKFRVPFDT-CRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIR 153

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+ VFD +  + L+P  + + TL+N + + G +DE   L   M+  G + D+ T+++++
Sbjct: 154 LAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLI 213

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+E K+++A  + +++  +G+  N  ++  +++  C+ G ++ A+E+   ML +   
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLS 273

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           P   T N L+  LCK G  + A      +   G KP+  ++  L++  C+   L  AFE
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFE 332


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 166/314 (52%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    + ILI+     G +  A ++L+EM    +  P++ TY+ +I G+CK G    A E
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGL-LPDMYTYNAIIRGMCKEGMVERAAE 273

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   + SK    PD ++YN+L+  F   GK D  +K++  M + GC PN   Y+ L++  
Sbjct: 274 LITSLTSKG-CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G++ EA  V   M    L PDT  Y  LI+  C+ GR+D A+ ++  M   GC  DI
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +N IL  LC+ G   +AL +  KL   G   N +SY  +++     G+  +A+ ++  
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P   T N L+  LC+ G+ E+A   L  + + GF+P   S+ +++  +C+ R+
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512

Query: 500 LLFAFELLDELVIK 513
           +  A  +  E++ K
Sbjct: 513 IDDAIGMFAEMIEK 526



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 160/293 (54%), Gaps = 2/293 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N +I   CK   +E+A +VL  MK ++   P+++TY+ +I  LC   +   A+
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMK-ARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + ++++  D  +P  +TY +LI+     G ++ A K++E M   G  P+++ Y  ++ G
Sbjct: 203 TVLDQLL-LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 261

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKEG ++ A E+   + +   +PD I Y  L+  F   G+ DE  +L+ EM  RGC+ +
Sbjct: 262 MCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 321

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            VT++I++  LCR G+I+EA+ +L+ +    +  +  SY  +++  C++G L+ AI ++ 
Sbjct: 322 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 381

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            M+  G LP     N +L  LCK G A  A      L  MG  P   S+  ++
Sbjct: 382 YMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 434



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 168/317 (52%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N +I+  CK G +E A E++  +  S+   P++I+Y+ L+      G++ E 
Sbjct: 248 LLPDMYTYNAIIRGMCKEGMVERAAELITSLT-SKGCEPDVISYNILLRAFLNQGKWDEG 306

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L  EM S+    P+ +TY++LI   CR G++D A  +++ M      P+ ++Y  L++
Sbjct: 307 EKLVAEMFSRG-CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLIS 365

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CKEG+L  A  + D M +    PD + Y T++   C+ G  ++ALE+  +++  GC  
Sbjct: 366 ALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 425

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ ++N ++  L   G    ALGM+  +   GI  ++ +Y  +++  C+ G +E+AI LL
Sbjct: 426 NVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLL 485

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   GF P   + N +L+ LCK    +DA      ++E G +P   ++ LL+E I   
Sbjct: 486 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFA 545

Query: 498 RKLLFAFELLDELVIKE 514
                A EL + L  ++
Sbjct: 546 GWRTEAMELANSLFSRD 562



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 161/311 (51%), Gaps = 3/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LIK       +E A  V++ ++    + P++  Y+ +I G CK  +   A +
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRVMEILESH--TEPDVFAYNAVISGFCKVNQIEAATQ 168

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M ++   LPD +TYN++I   C   K+  A  +++ +  + C P V  YT L+   
Sbjct: 169 VLNRMKARG-FLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEAT 227

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             EG + EA ++ +EM    L PD   Y  +I   C+ G V+ A EL+  +  +GC+ D+
Sbjct: 228 IVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDV 287

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++NI+L     +GK +E   ++ +++  G   NK +Y I+++  C+ G +++AI +L++
Sbjct: 288 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 347

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +   P   + + L+  LCK G  + A   +  ++  G  P+  ++  ++  +C+   
Sbjct: 348 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 407

Query: 500 LLFAFELLDEL 510
              A E+ ++L
Sbjct: 408 ANQALEIFNKL 418



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 151/304 (49%), Gaps = 3/304 (0%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   CK G    +   L+ +     + P++I  + LI G        +A  + E + S 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYT-PDVILCTKLIKGFFNFKNIEKASRVMEILESH 142

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +  PD   YN +I GFC+  +++ A +++  MK  G  P++  Y  ++   C   KL  
Sbjct: 143 TE--PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGL 200

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  V D++      P  I YT LI      G ++EA++LL+EM  RG   D+ T+N I+ 
Sbjct: 201 ALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 260

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C+EG +E A  ++  L   G   +  SY I+L     +G+ ++  +L+  M  RG  P
Sbjct: 261 GMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 320

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T + L+  LC+ G  ++A   L  ++E    P++ S+  L+  +C+  +L  A  ++
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380

Query: 508 DELV 511
           D ++
Sbjct: 381 DYMI 384


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 205/430 (47%), Gaps = 14/430 (3%)

Query: 87   EQKGFNHNNATYATILD---KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
            E+ GF     TY T+L+   K  RYK      A +  + Y  CK  E           N 
Sbjct: 1011 EENGFVPTIVTYNTLLNWYCKKGRYK------AAIELIDYMICKGIEADVCTYNVFIDNL 1064

Query: 144  SLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN 201
              + R  + +  +  + +E   P+    +T +N  ++  ++ +A       ++   L PN
Sbjct: 1065 CTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK-FDLSPN 1123

Query: 202  TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
               +N LI  HC  G  E A  +L  M+ + +   N +TY TL++GLCK+ +F  A  L 
Sbjct: 1124 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRL-NEVTYGTLLNGLCKHEKFELAKRLL 1182

Query: 262  EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            E M   D ++   + Y VLIDG C+ G +D A +++  M  +G NP+V  Y++L+NGFC+
Sbjct: 1183 ERMRVNDMVVGH-IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCR 1241

Query: 322  EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             G ++ AKE+   M    L  + I Y+TLI  FC+ G V EA+++   M   G  AD  T
Sbjct: 1242 VGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFT 1301

Query: 382  FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
             N+++  LCR+GK+ EA   L  +   G+  N  +Y  ++N     G+   A      M+
Sbjct: 1302 CNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMI 1361

Query: 442  CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
              G  P + T   LL  LCK G   +A   L  L  +    +S  +  L+   C+   L 
Sbjct: 1362 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 1421

Query: 502  FAFELLDELV 511
             A  L D++V
Sbjct: 1422 EAVALFDKMV 1431



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 218/437 (49%), Gaps = 11/437 (2%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            A+E F  V    GF  +  T   IL  + + K+ E V ++ R+M+ +    + G F  L+
Sbjct: 933  AVETFELVG-LVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 991

Query: 138  KHF---SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
                   N      +L+   +   +    P++   +T LN   +  +   A   + Y   
Sbjct: 992  NGLCVEGNLKKAGNLLKQMEENGFV----PTIVTYNTLLNWYCKKGRYKAAIELIDYMIC 1047

Query: 195  HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
               ++ + C +N+ I + C       A+ +LK+M+K  +S PN +TY+TLI+G  K G+ 
Sbjct: 1048 K-GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS-PNEVTYNTLINGFVKEGKI 1105

Query: 255  REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
              A ++F EM SK  + P+ +TYN LI G C  G  + A ++++ M+  G   N   Y T
Sbjct: 1106 GVAAQVFNEM-SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 1164

Query: 315  LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            L+NG CK  K + AK + + M+   +    I YT LI+  C+ G +DEA++L+  M + G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224

Query: 375  CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
               D++T++ ++ G CR G I+ A  ++ +++  G+ LNK  Y  ++   CQ G + +A+
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284

Query: 435  ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            ++  +M C G    + T N L+  LC+ G   +A   L  +  +G  P S ++  ++   
Sbjct: 1285 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344

Query: 495  CRGRKLLFAFELLDELV 511
                  L AF   D+++
Sbjct: 1345 GSIGDPLNAFSFFDDMI 1361



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 166/349 (47%), Gaps = 2/349 (0%)

Query: 162  EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
            + PS     + L  L +   +  A+ FL     ++    ++ ++N L+   CK G L  A
Sbjct: 1365 QHPSFFTYGSLLKGLCKGGNLVEAKKFLN-RLHYIPGAVDSVMYNTLLAETCKSGNLHEA 1423

Query: 222  FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
              +  +M ++ +  P+  TYS+L+ GLC+ G+   A+ LF   + +  + P+ + Y  L+
Sbjct: 1424 VALFDKMVQNNV-LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 1482

Query: 282  DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            DG  + G    A    E M   G  P+   +  +++   + G++ +A + F  M+ + + 
Sbjct: 1483 DGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVC 1542

Query: 342  PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            P+   Y  L++ F +   +   L L   M   G   D +TF+ ++ GL + G  +  + +
Sbjct: 1543 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 1602

Query: 402  LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            L K+  +G   ++ ++ I++N   + G++ KA +L+  M   G  P   T N +   L K
Sbjct: 1603 LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 1662

Query: 462  AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                 ++ + L  ++E G  P+   +  L+  +CR   +  AF+L DE+
Sbjct: 1663 KSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 1711



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 36/342 (10%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P++  ++ L+   C++G   +A  +          +PN + Y+ L+DGL K G  + A  
Sbjct: 1437 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 1496

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             FEEM+ K    PD + +N +ID   R G++ +A      M+  G  PN+  Y  L++GF
Sbjct: 1497 FFEEMMKKGTC-PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 1555

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             K+  L     ++  M    + PD + + +LI    ++G  D  ++LL +M   G  AD 
Sbjct: 1556 SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ 1615

Query: 380  VTFNIILGGLCREGKIEEALGM-----------------------------------LEK 404
             TFNI++      GK+ +A  +                                   L +
Sbjct: 1616 FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 1675

Query: 405  LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            +  +G+    A Y  ++N  C+ G+++ A +L   M   GF  H    + ++  L   G 
Sbjct: 1676 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 1735

Query: 465  AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
             EDA + L  ++ M   P   ++  L+   CR  K+  A +L
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 4/308 (1%)

Query: 208  LIKHHCKRGT-LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +++H C+ G   +S F  L +      S P++  +  LI    K G    A+E FE +V 
Sbjct: 885  ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFE-LVG 941

Query: 267  KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                 P   T N+++    +  + +    +   M + G  PNV  +  L+NG C EG L+
Sbjct: 942  LVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLK 1001

Query: 327  EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            +A  +  +M+     P  + Y TL+N +C+ GR   A+EL+  M  +G +AD+ T+N+ +
Sbjct: 1002 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFI 1061

Query: 387  GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
              LC   +  +A  +L+K+  + I  N+ +Y  ++N   ++G++  A ++   M      
Sbjct: 1062 DNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 1121

Query: 447  PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            P+  T N L+   C  G  E+A   L  +   G +    ++  L+  +C+  K   A  L
Sbjct: 1122 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 1181

Query: 507  LDELVIKE 514
            L+ + + +
Sbjct: 1182 LERMRVND 1189



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 157/323 (48%), Gaps = 10/323 (3%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            PN   +NIL+    K+  L     +   M +  + +P+ +T+ +LI GL K+G     ++
Sbjct: 1543 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGI-FPDKLTFHSLILGLSKSGIPDLGVK 1601

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            L  +M+  +  L D  T+N+LI+ +   GK+ +A  ++ FM   G  P+   Y  + NG 
Sbjct: 1602 LLGKMI-MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             K+   +E+  V  EM    + P    Y TLIN  CR G +  A +L  EM+  G  +  
Sbjct: 1661 NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 1720

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            V  + ++ GL   GK E+A+ +L+ +    +    A++  +++  C+  ++ +A++L  +
Sbjct: 1721 VAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGV 1780

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK---PESDSWALLVELICR 496
            M   G        N L++ +C  G   D+A A     EM  +   P   ++A+LV+ I  
Sbjct: 1781 MELCGLKLDVVAYNVLIMGMCANG---DSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1837

Query: 497  GRKLLFAFELLDELVIKESGTIQ 519
               L+   +LL +L  +E G I 
Sbjct: 1838 ANNLIQGEKLLTDL--QERGLIS 1858



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 129/251 (51%), Gaps = 2/251 (0%)

Query: 205  FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
            FNILI  + + G +  AF+++  M    + +P+  TY+ + +GL K   FRE+  +  EM
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGV-FPDRDTYNHIFNGLNKKSAFRESTVVLHEM 1676

Query: 265  VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            + ++ ++P    Y  LI+G CR G +  A K+ + M+  G   +    + ++ G    GK
Sbjct: 1677 L-ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 1735

Query: 325  LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             ++A  V D M    L P    +TTL++ FCR  ++ EAL+L   M+  G K D+V +N+
Sbjct: 1736 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1795

Query: 385  ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            ++ G+C  G    A  + E++ +  +  N  +Y ++++       L +  +LL  +  RG
Sbjct: 1796 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855

Query: 445  FLPHYATSNEL 455
             +    ++  L
Sbjct: 1856 LISWGGSTQHL 1866



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/183 (19%), Positives = 78/183 (42%), Gaps = 3/183 (1%)

Query: 88   QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            + G    +A Y T+++ + R    +    +  +M       HE     +++   +C   E
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737

Query: 148  RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              + +   +  + R  P++   +T ++      ++  A   LK   +   LK +   +N+
Sbjct: 1738 DAMLVLDHMLRM-RLLPTIATFTTLMHRFCRDAKIAEALK-LKGVMELCGLKLDVVAYNV 1795

Query: 208  LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            LI   C  G   +AFE+ +EM+   +  PN+ TY+ L+D +       +  +L  ++  +
Sbjct: 1796 LIMGMCANGDSAAAFELYEEMRHRDLC-PNITTYAVLVDAISAANNLIQGEKLLTDLQER 1854

Query: 268  DQI 270
              I
Sbjct: 1855 GLI 1857


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 189/352 (53%), Gaps = 11/352 (3%)

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            H++VL +  +++ ++          T +N L +  Q   A   L+  +  L ++ +  +
Sbjct: 161 FHDKVLALGFQLNQVSYR--------TLINGLCKVGQTKAALEMLRRIDGKL-VRLDVVM 211

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N +I   CK   +  AF+   EM   ++  P ++TY+TLI GLC  G+ ++AI L  +M
Sbjct: 212 YNTIIDGVCKDKLVNDAFDFYSEMVAKRIC-PTVVTYNTLICGLCIMGQLKDAIGLLHKM 270

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + ++ I P   T+++L+D FC+ GKV  AK +   M      PN+  Y +LMNG+C   +
Sbjct: 271 ILEN-INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE 329

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A+ +F+ M    + PD   Y+ +I+ FC+   VDEA++L +EM  +    D+VT+N 
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS 389

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC+ G+I  AL ++ ++   G   N  +Y  +L+  C+   ++KAIELL  +    
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             P   T N L+  LCK+G  +DA      ++  G+  +  ++  +++  C+
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 219/433 (50%), Gaps = 8/433 (1%)

Query: 82  FNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFS 141
           FN +  QK    +   +  IL  L +   +  V ++ RQM +     +      L+  FS
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--K 199
               +     +F  I     E P    ++T +  L     +  A   L + ++ L L  +
Sbjct: 116 QLGHNSLSFSVFSNILKKGYE-PDAITLTTLIKGLCLKGDIHKA---LHFHDKVLALGFQ 171

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            N   +  LI   CK G  ++A E+L+ +   ++   +++ Y+T+IDG+CK+    +A +
Sbjct: 172 LNQVSYRTLINGLCKVGQTKAALEMLRRID-GKLVRLDVVMYNTIIDGVCKDKLVNDAFD 230

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            + EMV+K +I P  +TYN LI G C  G++  A  ++  M     NP V+ ++ L++ F
Sbjct: 231 FYSEMVAK-RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAF 289

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEGK++EAK VF  M    +KP+ + Y +L+N +C    V++A  +   M + G   D+
Sbjct: 290 CKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDV 349

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            +++I++ G C+   ++EA+ + E++    I+ +  +Y  +++  C+ G +  A++L+  
Sbjct: 350 HSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGE 409

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  RG  P+  T N LL  LCK    + A   L  L +   +P   ++ +L+  +C+  +
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGR 469

Query: 500 LLFAFELLDELVI 512
           L  A ++ +++++
Sbjct: 470 LKDAQKVFEDVLV 482



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 155/269 (57%), Gaps = 2/269 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ P    +N LI   C  G L+ A  +L +M    ++ P + T+S L+D  CK G+ +E
Sbjct: 239 RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENIN-PTVYTFSILVDAFCKEGKVKE 297

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +F  M+ KD + P+ +TYN L++G+C   +V++A+ I   M   G  P+V +Y+ ++
Sbjct: 298 AKNVFVVMMKKD-VKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +GFCK   + EA ++F+EM    + PD + Y +LI+  C++GR+  AL+L+ EM +RG  
Sbjct: 357 SGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQP 416

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +I+T+N +L  LC+   +++A+ +L KL    I  +  +Y I++N  C+ G L+ A ++
Sbjct: 417 PNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKV 476

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              +L  G+     T N ++   CK G  
Sbjct: 477 FEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 145/278 (52%), Gaps = 1/278 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           NL+T S LI+   + G    +  +F  ++ K    PDA+T   LI G C  G + +A   
Sbjct: 103 NLVTLSILINCFSQLGHNSLSFSVFSNILKKGY-EPDAITLTTLIKGLCLKGDIHKALHF 161

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            + +   G   N  +Y TL+NG CK G+ + A E+   +   L++ D + Y T+I+  C+
Sbjct: 162 HDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCK 221

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
              V++A +   EM  +     +VT+N ++ GLC  G++++A+G+L K+  + I     +
Sbjct: 222 DKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYT 281

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           + I+++  C++G++++A  +  +M+ +   P+  T N L+   C       A      + 
Sbjct: 282 FSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMA 341

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           ++G  P+  S+++++   C+ + +  A +L +E+  K+
Sbjct: 342 QIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQ 379



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 119/198 (60%), Gaps = 3/198 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP++   ++ +N     N+V+ A++      Q + + P+   ++I+I   CK   ++ A 
Sbjct: 311 KPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ-IGVAPDVHSYSIMISGFCKIKMVDEAM 369

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++ +EM   Q+ +P+++TY++LIDGLCK+GR   A++L  EM  + Q  P+ +TYN L+D
Sbjct: 370 KLFEEMHCKQI-FPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQ-PPNIITYNSLLD 427

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+   VD+A +++  +K++   P+V  Y  L+NG CK G+L++A++VF+++       
Sbjct: 428 ALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNI 487

Query: 343 DTIGYTTLINCFCRAGRV 360
           D   Y T+I  FC+ G V
Sbjct: 488 DVYTYNTMIKGFCKKGFV 505



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 113/261 (43%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           +YS+  +      +    +  F  ++ +    P  + +  ++    +         +   
Sbjct: 35  SYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQ 94

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+ NG   N+   + L+N F + G    +  VF  +     +PD I  TTLI   C  G 
Sbjct: 95  MEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGD 154

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           + +AL    ++   G + + V++  ++ GLC+ G+ + AL ML ++    + L+   Y  
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+   +  A +    M+ +   P   T N L+  LC  G  +DA   L  ++   
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274

Query: 480 FKPESDSWALLVELICRGRKL 500
             P   ++++LV+  C+  K+
Sbjct: 275 INPTVYTFSILVDAFCKEGKV 295


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 170/316 (53%), Gaps = 1/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+PN   F  +I+  CKRG+++ AFE+L+EM       PN+ T+++LIDGLCK G   +A
Sbjct: 271 LEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWK-PNVYTHTSLIDGLCKKGWTEKA 329

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF ++V  +   P+ LTY  +I G+CR  K++RA+ ++  MK  G  PN   YTTL++
Sbjct: 330 FRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLID 389

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G  + A ++ + M +    P+   Y  ++N  C+ GRV EA ++L++  + G K 
Sbjct: 390 GHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKP 449

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+NI++   C++  I +AL +  K+   GI  +  SY  ++   C++  ++++    
Sbjct: 450 DKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFF 509

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
              +  G +P   T   ++   C+ G    A      L + G  P+S ++  ++  +C+ 
Sbjct: 510 EEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQ 569

Query: 498 RKLLFAFELLDELVIK 513
            K   A  L D ++ K
Sbjct: 570 SKRDEARSLYDSMIEK 585



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 164/315 (52%), Gaps = 3/315 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PNT   N +IK   + G +E A  + +EM    +  P+ I+Y  ++   CK G   EA
Sbjct: 166 LVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQ-PDSISYRVMVVMYCKIGNILEA 224

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +    M+ +  ++ +A T+ ++I  F   G   RA      + + G  PN+ N+T ++ 
Sbjct: 225 DKWLSVMLERGFVVDNA-TFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIE 283

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL-LKEMKERGCK 376
           G CK G +++A E+ +EM     KP+   +T+LI+  C+ G  ++A  L LK ++    K
Sbjct: 284 GLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHK 343

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +++T+  ++ G CRE K+  A  +L ++   G+  N  +Y  +++  C+ G  E+A +L
Sbjct: 344 PNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 403

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           + LM   GF P+  T N ++  LCK G  ++A   L    + G KP+  ++ +L+   C+
Sbjct: 404 MNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCK 463

Query: 497 GRKLLFAFELLDELV 511
              +  A  L ++++
Sbjct: 464 QENIRQALALFNKML 478



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 136/263 (51%), Gaps = 2/263 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN   +  +I  +C+   L  A  +L  MK+ Q   PN  TY+TLIDG CK G F  A 
Sbjct: 343 KPNVLTYTAMISGYCREDKLNRAEMLLSRMKE-QGLVPNTNTYTTLIDGHCKAGNFERAY 401

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +L   ++S +   P+  TYN +++G C+ G+V  A K++E    NG  P+ F Y  LM+ 
Sbjct: 402 DLMN-LMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSE 460

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+  +++A  +F++M    ++PD   YTTLI  FCR  R+ E+    +E    G    
Sbjct: 461 HCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPT 520

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+  ++ G CREG +  A+    +L   G   +  +Y  +++  C++ + ++A  L  
Sbjct: 521 NKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYD 580

Query: 439 LMLCRGFLPHYATSNELLVRLCK 461
            M+ +G +P   T   L    CK
Sbjct: 581 SMIEKGLVPCEVTRITLAYEYCK 603



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 39/286 (13%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C ++     E+  +  +++G   N  TY T++D   +   FE    ++  M+ E      
Sbjct: 357 CREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEG----- 411

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
                    FS                      P+L   +  +N L +  +V  A   L+
Sbjct: 412 ---------FS----------------------PNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
              Q+  LKP+   +NIL+  HCK+  +  A  +  +M K  +  P++ +Y+TLI   C+
Sbjct: 441 DGFQN-GLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQ-PDIHSYTTLIAVFCR 498

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
             R +E+   FEE V +  I+P   TY  +I G+CR G +  A K    + ++GC P+  
Sbjct: 499 ENRMKESEMFFEEAV-RIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSI 557

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            Y  +++G CK+ K  EA+ ++D M    L P  +   TL   +C+
Sbjct: 558 TYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 3/240 (1%)

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +++ F   G++  A +++  M N G  PN      ++    + G ++ A+ +F+EM    
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           ++PD+I Y  ++  +C+ G + EA + L  M ERG   D  TF +I+     +G    AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
               +L   G+  N  ++  ++   C++G +++A E+L  M+ +G+ P+  T   L+  L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 460 CKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           CK G  E A      LV     KP   ++  ++   CR  KL  A  LL  +  KE G +
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRM--KEQGLV 378


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 175/346 (50%), Gaps = 37/346 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I  H K G LE+ F +  +M    +  PN ITY+ L+ GLC+ GR  E   
Sbjct: 229 PNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLK-PNAITYNVLLSGLCRAGRMGETSA 287

Query: 260 LFEEMVSKDQILPDALTYNVLIDGF----------------------------------- 284
           L +EM S+ +++PD  TY++L DG                                    
Sbjct: 288 LLDEMASQ-KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGL 346

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ GKV  A+++++ + N G  P    Y TL+NG+C+ G+L+ A   F +MK+  +KPD 
Sbjct: 347 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 406

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I Y  LIN  C+A R+  A +LL EM++ G    + TFN ++    R G++E+   +L +
Sbjct: 407 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 466

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +  +G+  N  SY  ++N  C+ G++ +A+ +L  M  +  LP+    N ++    + G 
Sbjct: 467 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 526

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + A I +  +   G  P   ++ LL++ +C   ++  A E+++ L
Sbjct: 527 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 572



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 189/382 (49%), Gaps = 20/382 (5%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY  +L  L R  +     A+L +M  +        +  L    S     + +
Sbjct: 261 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 320

Query: 150 LEMFHKIHPITREKPSLK--------AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN 201
           L +F K         SLK          S  LN L +  +V +A+  L+ S  +  L P 
Sbjct: 321 LSLFGK---------SLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ-SLVNAGLVPT 370

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
             I+N LI  +C+ G LE AF    +MK   +  P+ ITY+ LI+GLCK  R   A +L 
Sbjct: 371 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK-PDHITYNALINGLCKAERITNAQDLL 429

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            EM   + + P   T+N LID + R G++++   ++  M+ NG  PNV +Y +++N FCK
Sbjct: 430 MEM-QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 488

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            GK+ EA  + D+M +  + P+   Y  +I+ +   G  D+A  L+++MK  G    IVT
Sbjct: 489 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 548

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N+++ GLC + +I EA  ++  L    +  +  SY  +++  C +G ++KA++L + M 
Sbjct: 549 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 608

Query: 442 CRGFLPHYATSNELLVRLCKAG 463
             G      T ++L+  L  AG
Sbjct: 609 KYGIKSTVRTYHQLISGLGGAG 630



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 161/318 (50%), Gaps = 3/318 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+T  +N  ++     G L  A  +L+ M +     PN  +Y+ +I G+ + GR  +A+
Sbjct: 157 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 216

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+F+EM  +  +LP+ +TYN +IDG  +GG ++    + + M  +G  PN   Y  L++G
Sbjct: 217 EVFDEMTER-AVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSG 275

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+ G++ E   + DEM +  + PD   Y+ L +   R G     L L  +  + G    
Sbjct: 276 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T +I+L GLC++GK+  A  +L+ L   G+   +  Y  ++N  CQ GELE A     
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 395

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  R   P + T N L+  LCKA    +A   L  + + G  P  +++  L++   R  
Sbjct: 396 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455

Query: 499 KLLFAFELLDELVIKESG 516
           +L   F +L E+  +E+G
Sbjct: 456 QLEKCFIVLSEM--QENG 471



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 159/336 (47%), Gaps = 38/336 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL--------- 248
           LKPN   +N+L+   C+ G +     +L EM   +M  P+  TYS L DGL         
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM-VPDGFTYSILFDGLSRNGDSKAM 320

Query: 249 --------------------------CKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
                                     CK+G+   A E+ + +V+   ++P  + YN LI+
Sbjct: 321 LSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG-LVPTRVIYNTLIN 379

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+C+ G+++ A      MK+    P+   Y  L+NG CK  ++  A+++  EM++  + P
Sbjct: 380 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 439

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
               + TLI+ + R G++++   +L EM+E G K ++V++  I+   C+ GKI EA+ +L
Sbjct: 440 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 499

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +++  +  N   Y  +++   + G  ++A  L+  M   G  P   T N L+  LC  
Sbjct: 500 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 559

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELIC-RG 497
               +A   +  L      P++ S+  L+   C RG
Sbjct: 560 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRG 595


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 222/483 (45%), Gaps = 49/483 (10%)

Query: 72  EKEPQCALEIFNTVSEQKGFN--HNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           EK  + ALE+ +T++E  G N   N  TY TI+D L + +  +  + VL+ M  +  K  
Sbjct: 174 EKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLD 233

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNF 188
              +  ++         +R   +    H I +  KP +   +T ++ L ++  VD A+  
Sbjct: 234 VVTYSTIIDGLCKAQAVDRAEGVLQ--HMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGV 291

Query: 189 LKYSNQHL---RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           L    QH+    +KP+   +N +I   CK   ++ A  VL+ M    +  P++ TY+ LI
Sbjct: 292 L----QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVK-PDIQTYNCLI 346

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
            G    G ++E +   EEM ++  + PD +TY++L+D  C+ GK   A+KI   M   G 
Sbjct: 347 HGYLSTGEWKEVVRRLEEMYAR-GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGI 405

Query: 306 NPNVFNYTTLMNGFCKEGKL-----------------------------------QEAKE 330
            PNV  Y  L++G+   G +                                    EA  
Sbjct: 406 KPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH 465

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +F  M    L PD + Y  LI+  C+ GRVD+A+    +M   G   + V FN ++ GLC
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
              + E+A  +  ++W  G+  N   +  ++   C +G++  A  L+  M   G  P+  
Sbjct: 526 TVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVI 585

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           + N L+   C AG  ++AA  L  +V +G KP+  S+  L+   C+  ++  A+ L  E+
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREM 645

Query: 511 VIK 513
           + K
Sbjct: 646 LRK 648



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 205/439 (46%), Gaps = 7/439 (1%)

Query: 65  AISLIKCEKEPQCALEIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT 122
            ++  +C    + A+ +FN ++         +  TY+ +     R  + E   A    + 
Sbjct: 58  VVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLIL 117

Query: 123 YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
               + +E +   L+    +    +  +++  +  P     P++ + +T L  L    +V
Sbjct: 118 KTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRV 177

Query: 183 DLAQNFLKY--SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           + A   L     +      PN   +N +I   CK   ++ A  VL+ M    +   +++T
Sbjct: 178 EEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKL-DVVT 236

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           YST+IDGLCK      A  + + M+ K  + PD +TYN +IDG C+   VDRA+ +++ M
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDK-GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM 295

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
            + G  P+V  Y T+++G CK   +  A  V   M +  +KPD   Y  LI+ +   G  
Sbjct: 296 IDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW 355

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            E +  L+EM  RG   D+VT++++L  LC+ GK  EA  +   +   GI  N   Y I+
Sbjct: 356 KEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGIL 415

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           L+    +G +    +LL LM+  G  P+    N +L    K  M ++A      + + G 
Sbjct: 416 LHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475

Query: 481 KPESDSWALLVELICR-GR 498
            P+  ++ +L++ +C+ GR
Sbjct: 476 SPDVVTYGILIDALCKLGR 494



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 206/429 (48%), Gaps = 12/429 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + G+  N      +L+ L   K+  EA+D +LR+M    C  +      L+K   N    
Sbjct: 118 KTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRV 177

Query: 147 ERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL---RLKPN 201
           E  LE+ H +         P++   +T ++ L ++  VD A+  L    QH+    +K +
Sbjct: 178 EEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVL----QHMIDKGVKLD 233

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              ++ +I   CK   ++ A  VL+ M    +  P+++TY+T+IDGLCK      A  + 
Sbjct: 234 VVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK-PDVVTYNTIIDGLCKAQAVDRAEGVL 292

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           + M+ K  + PD +TYN +IDG C+   VDRA  +++ M +    P++  Y  L++G+  
Sbjct: 293 QHMIDK-GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLS 351

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G+ +E     +EM    L PD + Y+ L++  C+ G+  EA ++   M  +G K ++  
Sbjct: 352 TGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTI 411

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           + I+L G    G I +   +L+ +  +GI  N   + IVL    +K  +++A+ +   M 
Sbjct: 412 YGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMS 471

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P   T   L+  LCK G  +DA +    ++  G  P S  +  LV  +C   +  
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531

Query: 502 FAFELLDEL 510
            A EL  E+
Sbjct: 532 KAEELFFEM 540



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 160/315 (50%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           + N  + N L+   C    ++ A ++L          PN+++ +TL+ GLC   R  EA+
Sbjct: 122 RVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEAL 181

Query: 259 ELFEEMV--SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           EL   M         P+ +TYN +IDG C+   VDRA+ +++ M + G   +V  Y+T++
Sbjct: 182 ELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTII 241

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G CK   +  A+ V   M +  +KPD + Y T+I+  C+A  VD A  +L+ M ++G K
Sbjct: 242 DGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVK 301

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+VT+N I+ GLC+   ++ A G+L+ +    +  +  +Y  +++     GE ++ +  
Sbjct: 302 PDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRR 361

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M  RG  P   T + LL  LCK G   +A    + ++  G KP    + +L+     
Sbjct: 362 LEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAA 421

Query: 497 GRKLLFAFELLDELV 511
              +    +LLD +V
Sbjct: 422 RGAIADLTDLLDLMV 436



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 163/309 (52%), Gaps = 2/309 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  IFNI++  + K+  ++ A  +   M +  +S P+++TY  LID LCK GR  +A
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLS-PDVVTYGILIDALCKLGRVDDA 498

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +  F +M++ D + P+++ +N L+ G C   + ++A+++   M + G  PNV  + T+M 
Sbjct: 499 VLKFNQMIN-DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C EG++  A+ + D M+   ++P+ I Y TLI   C AGR DEA +LL  M   G K 
Sbjct: 558 NLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+++++ +L G C+ G+I+ A  +  ++   G+     +Y  +L          +A EL 
Sbjct: 618 DLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELY 677

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G      T N +L  LCK    ++A      L     +P   ++ ++++++ +G
Sbjct: 678 LNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKG 737

Query: 498 RKLLFAFEL 506
            +   A +L
Sbjct: 738 GRKKDAMDL 746



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 208/427 (48%), Gaps = 4/427 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG   +  TY TI+D L + +  +  D VL+ M  +  K     +  L+  + +    +
Sbjct: 297 DKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWK 356

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            V+    +++    + P +   S  L+ L ++ +   A+    Y      +KPN  I+ I
Sbjct: 357 EVVRRLEEMYARGLD-PDVVTYSLLLDYLCKNGKCTEARKIF-YCMIRKGIKPNVTIYGI 414

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+  +  RG +    ++L  M  + +S PN   ++ ++    K     EA+ +F  M S+
Sbjct: 415 LLHGYAARGAIADLTDLLDLMVANGIS-PNNYIFNIVLCAYAKKAMIDEAMHIFSRM-SQ 472

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD +TY +LID  C+ G+VD A      M N+G  PN   + +L+ G C   + ++
Sbjct: 473 HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEK 532

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E+F EM +  ++P+ + + T++   C  G+V  A  L+  M+  G + +++++N ++G
Sbjct: 533 AEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIG 592

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G C  G+ +EA  +L+ +   G+  +  SY  +L   C+ G ++ A  L R ML +G  P
Sbjct: 593 GHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTP 652

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T + +L  L       +A      +++ G + +  ++ +++  +C+   +  AF++ 
Sbjct: 653 GAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIF 712

Query: 508 DELVIKE 514
             L  K+
Sbjct: 713 QSLCSKD 719



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 194/406 (47%), Gaps = 4/406 (0%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G + +  TY+ +LD L +  K      +   M  +  K +  I+  L+  ++       
Sbjct: 368 RGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIAD 427

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           + ++   +       P+    +  L    +   +D A +     +QH  L P+   + IL
Sbjct: 428 LTDLL-DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQH-GLSPDVVTYGIL 485

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G ++ A     +M    ++ PN + +++L+ GLC   R+ +A ELF EM  + 
Sbjct: 486 IDALCKLGRVDDAVLKFNQMINDGVT-PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ- 543

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + P+ + +N ++   C  G+V  A+++++ M+  G  PNV +Y TL+ G C  G+  EA
Sbjct: 544 GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEA 603

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++ D M +  LKPD I Y TL+  +C+ GR+D A  L +EM  +G     VT++ IL G
Sbjct: 604 AQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQG 663

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           L    +  EA  +   +   G   +  +Y I+LN  C+   +++A ++ + +  +   P+
Sbjct: 664 LFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPN 723

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
             T   ++  L K G  +DA      +   G  P   ++ ++++ I
Sbjct: 724 IITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNI 769



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 194/421 (46%), Gaps = 44/421 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR--QMTYETCKFHEGIFLN 135
           A+ IF+ +S Q G + +  TY  ++D L +  + +  DAVL+  QM  +    +  +F +
Sbjct: 463 AMHIFSRMS-QHGLSPDVVTYGILIDALCKLGRVD--DAVLKFNQMINDGVTPNSVVFNS 519

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+         E+  E+F ++                                    +Q 
Sbjct: 520 LVYGLCTVDRWEKAEELFFEMW-----------------------------------DQG 544

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +R  PN   FN ++ + C  G +  A  ++  M++  +  PN+I+Y+TLI G C  GR  
Sbjct: 545 VR--PNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVR-PNVISYNTLIGGHCLAGRTD 601

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA +L + MVS   + PD ++Y+ L+ G+C+ G++D A  +   M   G  P    Y+T+
Sbjct: 602 EAAQLLDVMVSV-GLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G     +  EAKE++  M     + D   Y  ++N  C+   VDEA ++ + +  +  
Sbjct: 661 LQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + +I+TF I++  L + G+ ++A+ +   +   G+  N  +Y I++    Q+G L++   
Sbjct: 721 RPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDN 780

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   M   G  P     N ++  L   G    A   L  + EM F  E+ + +LL+ L  
Sbjct: 781 LFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFS 840

Query: 496 R 496
           R
Sbjct: 841 R 841



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 136/264 (51%), Gaps = 6/264 (2%)

Query: 257 AIELFEEMVS--KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           A+ LF  M     +++ PD  TY++L   FCR G+++        +   G   N      
Sbjct: 71  AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQ 130

Query: 315 LMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           L+NG C   ++ EA ++    M  F   P+ +   TL+   C   RV+EALELL  M E 
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190

Query: 374 G---CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           G   C  ++VT+N I+ GLC+   ++ A G+L+ +   G+ L+  +Y  +++  C+   +
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           ++A  +L+ M+ +G  P   T N ++  LCKA   + A   L  +++ G KP+  ++  +
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310

Query: 491 VELICRGRKLLFAFELLDELVIKE 514
           ++ +C+ + +  A  +L  ++ K+
Sbjct: 311 IDGLCKAQAVDRADGVLQHMIDKD 334



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 45/199 (22%)

Query: 360 VDEALELLKEM-------------------------------------KERGC----KAD 378
           +D+AL+L  E+                                       R C    + D
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE-LL 437
           + T++I+ G  CR G+IE        +   G  +N+     +LN  C    +++A++ LL
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF---KPESDSWALLVELI 494
           R M   G +P+  + N LL  LC     E+A   L  + E G     P   ++  +++ +
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 495 CRGRKLLFAFELLDELVIK 513
           C+ + +  A  +L  ++ K
Sbjct: 210 CKAQAVDRAEGVLQHMIDK 228


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 204/412 (49%), Gaps = 10/412 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
             G   N  TY  +L  L R  + +   A++ +M   +       +  L    +     +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316

Query: 148 RVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            +L +F +    + +K  +    TC   LN L +  +V  A+   +    H  L P T I
Sbjct: 317 TMLSLFAE----SLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEML-VHTGLVPTTVI 371

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI  +C+   L  AF + ++MK   +  P+ ITY+ LI+GLCK     +A +L  EM
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIR-PDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  + P   T+N LID +   G++++   ++  M+  G   +V ++ +++  FCK GK
Sbjct: 431 -EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  + D+M    + P+   Y ++I+ +  +G  ++AL L+++MK  G  A IVT+N+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L GLCR  +I+EA  ++  L   G+  +  SY  +++  C KG+ +KA+ELL+ M   G
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             P   T + L+  L  AG   D       ++    +P S  + ++V+   R
Sbjct: 610 IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 179/351 (50%), Gaps = 10/351 (2%)

Query: 166 LKAISTCLNLLIES-----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           L ++S+C NLL+ES        D+   F        R  P+T  +N +++     G L+ 
Sbjct: 119 LPSLSSC-NLLLESLLFVGRHADVRAAFGLLVAAGAR--PDTFAWNKVVQACVAAGDLDV 175

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           A  +L+ M +S+ + P +  +Y+ +I GL ++G+  +A+++F+EMV    + P+ +TYN 
Sbjct: 176 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM-GVAPNRITYNT 234

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +IDG  +GG ++   ++ + M ++G  PNV  Y  L++G C+ G++ E + + DEM +  
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + PD   Y+ L +   R G     L L  E  ++G      T +I+L GLC++GK+ +A 
Sbjct: 295 MLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAK 354

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            + E L + G+      Y  ++N  CQ  +L  A  +   M  R   P + T N L+  L
Sbjct: 355 QVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           CK  M   A   +  + + G  P  +++  L++      +L   F +L ++
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 174/364 (47%), Gaps = 38/364 (10%)

Query: 183 DLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           DL   F L+    H   KPN   +N+L+   C+ G ++    ++ EM    M  P+  TY
Sbjct: 244 DLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSM-LPDGFTY 302

Query: 242 STLIDGL-----------------------------------CKNGRFREAIELFEEMVS 266
           S L DGL                                   CK+G+  +A ++FE M+ 
Sbjct: 303 SILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE-MLV 361

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              ++P  + YN LI+G+C+   +  A  I E MK+    P+   Y  L+NG CK   + 
Sbjct: 362 HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVT 421

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A+++  EM+   + P    + TLI+ +  AG++++   +L +M+++G K+D+++F  ++
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
              C+ GKI EA+ +L+ + Y  +  N   Y  +++   + G+ E+A+ L+  M   G  
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVS 541

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
               T N LL  LC++   ++A   ++ L   G +P+  S+  ++   C       A EL
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601

Query: 507 LDEL 510
           L E+
Sbjct: 602 LQEM 605



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 98/181 (54%), Gaps = 2/181 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  ++N +I  + + G  E A  ++++MK S +S  +++TY+ L+ GLC++ +  EA
Sbjct: 505 VAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVS-ASIVTYNLLLKGLCRSSQIDEA 563

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL   + ++  + PD ++YN +I   C  G  D+A ++++ M   G  P +    TL++
Sbjct: 564 EELIYTLRNQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVS 622

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
                G++ + + ++ +M +  ++P +  Y  +++ + R     +   L KEM E+G   
Sbjct: 623 ALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAF 682

Query: 378 D 378
           D
Sbjct: 683 D 683



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 32/261 (12%)

Query: 32  VIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVS--EQK 89
           V++      DP VET +T +DA        +G A  L KC          F  +S  +QK
Sbjct: 427 VMEMEKSGVDPSVETFNTLIDA--------YGTAGQLEKC----------FTVLSDMQQK 468

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  ++ +++    +  K     A+L  M Y+    +  ++ +++  +      E+ 
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 528

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           L +  K+     +   + A     NLL++    S+Q+D A+  + Y+ ++  L+P+   +
Sbjct: 529 LLLVEKM-----KNSGVSASIVTYNLLLKGLCRSSQIDEAEELI-YTLRNQGLRPDVVSY 582

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N +I   C +G  + A E+L+EM K  +  P L T  TL+  L   GR  +   L+++M+
Sbjct: 583 NTIISACCNKGDTDKALELLQEMNKYGIR-PTLRTCHTLVSALASAGRVHDMECLYQQML 641

Query: 266 SKDQILPDALTYNVLIDGFCR 286
            K+ + P +  Y +++D + R
Sbjct: 642 HKN-VEPSSSIYGIMVDAYVR 661


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 234/514 (45%), Gaps = 64/514 (12%)

Query: 36  NTPKADPPVETSDTCVDARKRSRFISHGAAISLIKC---EKEPQCALEIFNTVSEQKGFN 92
           N  +  PP    D  VD       ++H  A++++     +     AL  FN       F 
Sbjct: 56  NHARFSPPTLHLD--VDPNS----LTHDQAVTIVASLASDAGSMVALSFFNWAIASSKFR 109

Query: 93  HNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEM 152
           H    Y      L   K FE    V++ M               +K F+     +  +EM
Sbjct: 110 HFTRLYIACAASLISNKNFEKAHEVMQCM---------------VKSFAEIGRVKEAIEM 154

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKH 211
             ++H      PS K ++  + ++ E   V+ A+N   +     R ++PN   + +++  
Sbjct: 155 VIEMHN-QGLAPSTKTLNWVVKIVTEMGLVEYAENL--FDEMCARGVQPNCVSYRVMVVG 211

Query: 212 HCKRGT-----------LESAFEV-------------LKEMKKSQMSY----------PN 237
           +CK G            +E  F V              K      + Y          PN
Sbjct: 212 YCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPN 271

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI- 296
           LI ++ +I+GLCK G  ++A E+ EEMV +    P+  T+  LIDG C+ G  ++A ++ 
Sbjct: 272 LINFTCMIEGLCKRGSVKQAFEMLEEMVGRGW-KPNVYTHTALIDGLCKKGWTEKAFRLF 330

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           ++ +++    PNV  YT +++G+C++ K+  A+ +   MK   L P+T  YTTLI+  C+
Sbjct: 331 LKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCK 390

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           AG  + A EL+  M E G   ++ T+N I+ GLC++G+++EA  +L+  + +G+  +K +
Sbjct: 391 AGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVT 450

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y I+++  C++ E+++A+ L   M+  G  P   +   L+   C+    +++ +     V
Sbjct: 451 YTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAV 510

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G  P + ++  ++   CR   L  A +    +
Sbjct: 511 RFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM 544



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 168/316 (53%), Gaps = 1/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+PN   F  +I+  CKRG+++ AFE+L+EM       PN+ T++ LIDGLCK G   +A
Sbjct: 268 LRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWK-PNVYTHTALIDGLCKKGWTEKA 326

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF ++V  +   P+ LTY  +I G+CR  K++RA+ ++  MK  G  PN   YTTL++
Sbjct: 327 FRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLID 386

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G  + A E+ + M      P+   Y  +++  C+ GRV EA ++LK     G  A
Sbjct: 387 GHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDA 446

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT+ I++   C++ +I++AL +  K+   GI  +  SY  ++   C++  ++++    
Sbjct: 447 DKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFF 506

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
              +  G +P   T   ++   C+ G    A      + + G   +S ++  L+  +C+ 
Sbjct: 507 EEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQ 566

Query: 498 RKLLFAFELLDELVIK 513
            KL  A  L D ++ K
Sbjct: 567 SKLDEARCLYDAMIEK 582



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 160/315 (50%), Gaps = 9/315 (2%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN   +  +I  +C+   +  A  +L  MK+  ++ PN  TY+TLIDG CK G F  A 
Sbjct: 340 KPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLA-PNTNTYTTLIDGHCKAGNFERAY 398

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           EL   M +++   P+  TYN ++DG C+ G+V  A K+++    NG + +   YT L++ 
Sbjct: 399 ELMNVM-NEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISE 457

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK+ ++++A  +F++M    ++PD   YTTLI  FCR  R+ E+    +E    G    
Sbjct: 458 HCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPT 517

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+  ++ G CREG +  AL    ++   G   +  +Y  +++  C++ +L++A  L  
Sbjct: 518 NKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYD 577

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+ +G  P   T   L    CK    +D   A+  L  +  K    +   LV  +C  R
Sbjct: 578 AMIEKGLTPCEVTRVTLAYEYCK---IDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSER 634

Query: 499 KL----LFAFELLDE 509
           K+    LF  +LLD+
Sbjct: 635 KVGMAALFFHKLLDK 649



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 146/335 (43%), Gaps = 42/335 (12%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C  E     E+  +  +++G   N  TY T++D   +   FE    ++  M  E      
Sbjct: 354 CRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEG----- 408

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
                    FS                      P++   +  ++ L +  +V  A   LK
Sbjct: 409 ---------FS----------------------PNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            S     L  +   + ILI  HCK+  ++ A  +  +M KS +  P++ +Y+TLI   C+
Sbjct: 438 -SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQ-PDIHSYTTLIAVFCR 495

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
             R +E+   FEE V +  ++P   TY  +I G+CR G +  A K    M ++GC  +  
Sbjct: 496 EKRMKESEMFFEEAV-RFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSI 554

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y  L++G CK+ KL EA+ ++D M    L P  +   TL   +C+      A+ +L+ +
Sbjct: 555 TYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERL 614

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
           ++   K  + T N ++  LC E K+  A     KL
Sbjct: 615 EK---KLWVRTVNTLVRKLCSERKVGMAALFFHKL 646



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 3/238 (1%)

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           ++  F   G+V  A +++  M N G  P+      ++    + G ++ A+ +FDEM    
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           ++P+ + Y  ++  +C+ G V E+   L  M ERG   D  T ++I+   C +G +  AL
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
               +    G+  N  ++  ++   C++G +++A E+L  M+ RG+ P+  T   L+  L
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 460 CKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           CK G  E A      LV     KP   ++  ++   CR  K+  A  LL  +  KE G
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRM--KEQG 373


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 193/386 (50%), Gaps = 39/386 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +   +    G + +  +Y  +L  L   K++  V  ++ +M    C  +   F  L+
Sbjct: 208 ALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLI 267

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
            +     L ERV    H++                           LAQ         +R
Sbjct: 268 GYLCRNGLFERV----HQV---------------------------LAQMVDHGCTPDIR 296

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +      +  ++   CK G LE A E+L  M    +  PN++ Y+T++ GLC   R+ +A
Sbjct: 297 M------YATVLDGVCKEGHLEVAHEILDRMPSYGLK-PNVVCYNTVLKGLCSAERWEQA 349

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL  EM   D  L D +T+N+L+D FC+ G V R  +++E M  +GC P+V  YTT++N
Sbjct: 350 EELLAEMFDNDCPLDD-VTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCKEG + EA  +   M     +P+TI YT ++   C A R  +A +L+ +M E+GC  
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VTFN ++  LC++G +E+A+ +L+++  +G   +  SY  V++   + G+ ++A+ELL
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAG 463
            +M+ +G  P+    + +   L K G
Sbjct: 529 NVMVNKGMSPNTIIYSSIASALSKEG 554



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 174/308 (56%), Gaps = 2/308 (0%)

Query: 206 NILIKHHCKRG-TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           N+++   C +G +++ A  +L+++  S    P++++Y+ ++ GLC   R+    +L EEM
Sbjct: 192 NLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEM 251

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V +    P+ +T+N LI   CR G  +R  +++  M ++GC P++  Y T+++G CKEG 
Sbjct: 252 V-RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH 310

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+ A E+ D M ++ LKP+ + Y T++   C A R ++A ELL EM +  C  D VTFNI
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNI 370

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C+ G +   + +LE++   G   +  +Y  V+N  C++G +++A+ LL+ M   G
Sbjct: 371 LVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+  +   +L  LC A    DA   +  ++E G  P   ++  ++  +C+   +  A 
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI 490

Query: 505 ELLDELVI 512
           ELL ++++
Sbjct: 491 ELLKQMLL 498



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 165/353 (46%), Gaps = 40/353 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC-------- 249
           + PN   +  +++  C RG +  A  VL EM++   + P    Y  +++  C        
Sbjct: 111 VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCA-PIPPMYHVILEAACSRGGGGGF 169

Query: 250 -------------------------------KNGRFREAIELFEEMVSKDQILPDALTYN 278
                                          + G   EA+ L  ++ +     PD ++YN
Sbjct: 170 RSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYN 229

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            ++ G C   +  R + +ME M   GC PNV  + TL+   C+ G  +   +V  +M + 
Sbjct: 230 AVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              PD   Y T+++  C+ G ++ A E+L  M   G K ++V +N +L GLC   + E+A
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQA 349

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             +L +++ +   L+  ++ I+++F CQ G + + IELL  ML  G +P   T   ++  
Sbjct: 350 EELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVING 409

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            CK G+ ++A + L  +   G +P + S+ ++++ +C   + + A +L+ +++
Sbjct: 410 FCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMI 462



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 196/408 (48%), Gaps = 58/408 (14%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  T+ T++  L R   FE V  VL QM    C     ++  ++         E  
Sbjct: 255 GCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCK----EGH 310

Query: 150 LEMFHKI---HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC--- 203
           LE+ H+I    P    KP++   +T L  L  + + + A+  L        +  N C   
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLA------EMFDNDCPLD 364

Query: 204 --IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              FNIL+   C+ G +    E+L++M +     P++ITY+T+I+G CK G   EA+ L 
Sbjct: 365 DVTFNILVDFFCQNGLVYRVIELLEQMLE-HGCVPDVITYTTVINGFCKEGLIDEAVMLL 423

Query: 262 EEM-------------------------VSKDQIL---------PDALTYNVLIDGFCRG 287
           + M                         V  + ++         P+ +T+N +I+  C+ 
Sbjct: 424 KSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKK 483

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G V++A ++++ M  NGC+P++ +Y+T+++G  K GK  EA E+ + M N  + P+TI Y
Sbjct: 484 GLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 543

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           +++ +   + GR++  +++   +++   ++D V +N ++  LC+ G  + A+  L  +  
Sbjct: 544 SSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVS 603

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG-----FLPHYA 450
            G   N+++Y I++     +G +++A E+L  +  +G     F+ H+ 
Sbjct: 604 SGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHFMKHFG 651



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 44/311 (14%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ ++ G C+ G+   A      + +   + P+A TY  ++   C  G++  A  +++ M
Sbjct: 86  YNAMVSGYCRAGQLASA----RRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEM 141

Query: 301 KNNGCNP--------------------------------------NVFNYTTLMNGFCKE 322
           +  GC P                                      +V N   ++N  C +
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQ 201

Query: 323 -GKLQEAKEVFDEMK-NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            G + EA  +  ++  +F   PD + Y  ++   C A R     +L++EM   GC  ++V
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TFN ++G LCR G  E    +L ++   G   +   Y  VL+  C++G LE A E+L  M
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G  P+    N +L  LC A   E A   L  + +     +  ++ +LV+  C+   +
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 501 LFAFELLDELV 511
               ELL++++
Sbjct: 382 YRVIELLEQML 392


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 183/369 (49%), Gaps = 40/369 (10%)

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           C NL+ +  + ++   F K     +  K  P+   +  +IK HCK G +     VL EM+
Sbjct: 210 CNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME 269

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           K     PNL TY+  I GLC+ G   EA+E+ + M+ K  + PD  TY +L+DGFC+  +
Sbjct: 270 KE--CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG-LGPDGHTYTLLVDGFCKQKR 326

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK-------- 341
              AK I E M ++G NPN F YT L++GF KEG ++EA  + DEM    LK        
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386

Query: 342 ---------------------------PDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
                                      PDT  Y  LI+ + ++  + +A ELL EMK R 
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
                 T+++++ GLC    +++A  +L+++  +G+  N   Y  ++    Q+   E AI
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ELL++M+  G LP     N L++ LC+A   E+A + L  + E G KP + ++   + L 
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566

Query: 495 CRGRKLLFA 503
            +  ++  A
Sbjct: 567 SKSGEIQVA 575



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 171/306 (55%), Gaps = 4/306 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP+       +NL  +S ++ +A+ + K       + PN  I+ ILIK HC  G    A 
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFK-DMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
              K M +  +  P++  YS +I  L KNG+ +EA+ +F + + K  ++PD   YN LI 
Sbjct: 612 STFKCMLEKGL-IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL-KTGVVPDVFLYNSLIS 669

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GFC+ G +++A ++ + M +NG NPN+  Y TL+NG CK G++ +A+E+FDE++   L P
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP 729

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + Y+T+I+ +C++G + EA +L  EM  +G   D   + I++ G  +EG +E+AL + 
Sbjct: 730 DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 789

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +     +    A   ++ +F C+ G++ +A EL   M+ +   P+  T   L+    KA
Sbjct: 790 HEAQQKSVGSLSAFNSLIDSF-CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 848

Query: 463 GMAEDA 468
            M E+A
Sbjct: 849 EMMEEA 854



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 212/445 (47%), Gaps = 11/445 (2%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           +K  + A  IF ++    G N N  TY  ++D   +    E    +  +M     K +  
Sbjct: 324 QKRSKEAKLIFESMPSS-GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFL 189
            +  ++   +      + + +F+++         L+  +   NLLI+      D+A+   
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEML-----MAGLEPDTWTYNLLIDGYLKSHDMAKACE 437

Query: 190 KYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
             +    R L P+   +++LI   C    L+ A EVL +M ++ +  PN+  Y TLI   
Sbjct: 438 LLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK-PNVFMYGTLIKAY 496

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
            +  R+  AIEL + M++ + +LPD   YN LI G CR  KV+ AK ++  M   G  PN
Sbjct: 497 VQESRYEMAIELLKIMIA-NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
              Y   +N + K G++Q A+  F +M +  + P+ + YT LI   C  G   EAL   K
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            M E+G   DI  ++ I+  L + GK +EA+G+  K    G+  +   Y  +++  C++G
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           ++EKA +L   ML  G  P+    N L+  LCK G    A      + E    P+  +++
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYS 735

Query: 489 LLVELICRGRKLLFAFELLDELVIK 513
            +++  C+   L  AF+L DE++ K
Sbjct: 736 TIIDGYCKSGNLTEAFKLFDEMISK 760



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 171/338 (50%), Gaps = 39/338 (11%)

Query: 195  HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            H  + PN  ++N LI   CK G +  A E+  E+++  +  P+++TYST+IDG CK+G  
Sbjct: 689  HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL-VPDVVTYSTIIDGYCKSGNL 747

Query: 255  REAIELFEEMVSKDQILPDALTYNVLIDG------------------------------- 283
             EA +LF+EM+SK  I PD   Y +LIDG                               
Sbjct: 748  TEAFKLFDEMISKG-ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 806

Query: 284  ---FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
               FC+ GKV  A+++ + M +    PN+  YT L++ + K   ++EA+++F +M+   +
Sbjct: 807  IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 866

Query: 341  KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
             P+T+ YT+L+  + + G   + + L K+M+ RG   D + + ++    C+EGK  EAL 
Sbjct: 867  IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 926

Query: 401  MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
            +L K   +GI L    +  ++   C++ ++   +ELL  M          T N LL+   
Sbjct: 927  LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 986

Query: 461  KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            K+G  ++A+  L  +  +G+ P S S   L + I  GR
Sbjct: 987  KSGNEDEASKVLGVMQRLGWVPTSLS---LTDSISTGR 1021



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 211/431 (48%), Gaps = 21/431 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG   N  TY   ++  ++  + +  +   + M       +  I+  L+K   +     
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608

Query: 148 RVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTC 203
             L  F        EK   P ++A S  ++ L ++ +   A   FLK+    +   P+  
Sbjct: 609 EALSTFK----CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV--PDVF 662

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           ++N LI   CK G +E A ++  EM  + ++ PN++ Y+TLI+GLCK G   +A ELF+E
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGIN-PNIVVYNTLINGLCKLGEVTKARELFDE 721

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           +  KD ++PD +TY+ +IDG+C+ G +  A K+ + M + G +P+ + Y  L++G  KEG
Sbjct: 722 IEEKD-LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780

Query: 324 KLQEAKEVFDEMKNFLLKPDTIG----YTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            L++A  +F E +       ++G    + +LI+ FC+ G+V EA EL  +M ++    +I
Sbjct: 781 NLEKALSLFHEAQQ-----KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 835

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+ I++    +   +EEA  +   +    I  N  +Y  +L    Q G   K I L + 
Sbjct: 836 VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 895

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  RG          +    CK G + +A   L   +  G K E D +  L+  +C+ ++
Sbjct: 896 MEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQ 955

Query: 500 LLFAFELLDEL 510
           +    ELL E+
Sbjct: 956 ISTVLELLSEM 966



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 203/419 (48%), Gaps = 42/419 (10%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY+ ++  L      +  + VL QM     K +  ++  L+K +   S +E  +E+  KI
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL-KI 511

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P L   +  +  L  + +V+ A+  L    +   +KPN   +   I  + K G
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK-GIKPNAHTYGAFINLYSKSG 570

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            ++ A    K+M  S +  PN + Y+ LI G C  G   EA+  F+ M+ K  ++PD   
Sbjct: 571 EIQVAERYFKDMLSSGI-VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG-LIPDIRA 628

Query: 277 YNVLIDGFCRGGKVDRAKKI-MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           Y+ +I    + GK   A  + ++F+K  G  P+VF Y +L++GFCKEG +++A +++DEM
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKT-GVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
            +  + P+ + Y TLIN  C+ G V +A EL  E++E+    D+VT++ I+ G C+ G +
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            EA  + +++   GI  +   Y I+++   ++G LEKA+ L           H A    +
Sbjct: 748 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF----------HEAQQKSV 797

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
                        +++ F                L++  C+  K++ A EL D++V K+
Sbjct: 798 ------------GSLSAFNS--------------LIDSFCKHGKVIEARELFDDMVDKK 830



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 3/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P     N L++   K   +   ++V   M ++++  P++ TY+ +I   CK G   +   
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKI-VPDVYTYTNVIKAHCKVGDVIKGKM 263

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  EM  + +  P+  TYN  I G C+ G VD A ++ + M   G  P+   YT L++GF
Sbjct: 264 VLSEM--EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGF 321

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ + +EAK +F+ M +  L P+   YT LI+ F + G ++EAL +  EM  RG K ++
Sbjct: 322 CKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNV 381

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++GG+ + G++ +A+ +  ++   G+  +  +Y ++++   +  ++ KA ELL  
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAE 441

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  R   P   T + L+  LC +   + A   L  ++  G KP    +  L++   +  +
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 500 LLFAFELLDELV 511
              A ELL  ++
Sbjct: 502 YEMAIELLKIMI 513



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 152/334 (45%), Gaps = 57/334 (17%)

Query: 231 SQMSYPN-LITYSTLIDGLCKNGRFREAIELFEEMVSKDQI---LPDALT---------- 276
           S+MS P  L +YS L   LC +G   +A  + E+++   +    + D+L           
Sbjct: 112 SKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSN 171

Query: 277 ---YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
              +++ ID F   G ++ A  +     + G  P +     LM    K   +    +V+ 
Sbjct: 172 LTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYG 231

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M    + PD   YT +I   C+ G V +   +L EM E+ CK ++ T+N  +GGLC+ G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290

Query: 394 KIEEALG----MLEK----------LWYD---------------------GIYLNKASYR 418
            ++EAL     M+EK          L  D                     G+  N+ +Y 
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG-MAEDAAIALFGLVE 477
            +++   ++G +E+A+ +   M+ RG   +  T N ++  + KAG MA+  A++LF  + 
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK--AMSLFNEML 408

Query: 478 M-GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           M G +P++ ++ LL++   +   +  A ELL E+
Sbjct: 409 MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 219/443 (49%), Gaps = 31/443 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   +  TY TI++ + +     +   +LR+M     K +  I+  ++        H 
Sbjct: 38  EEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHI 97

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN--QHLR------LK 199
           +   +F ++H    EK          N+L  +  +D   ++ K+S+  Q LR      + 
Sbjct: 98  KAQNIFTEMH----EKGIFP------NVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNID 147

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F+ LI    K G +  A E+ +EM +  + +P  ITYS++IDG CK+ R  +A  
Sbjct: 148 PDVVTFSALINAFVKEGKVSGAEELYREMLRRNI-FPTTITYSSMIDGFCKHSRLEDAKH 206

Query: 260 LFEEMVSKDQILPDALTYNVLIDG-----------FCRGGKVDRAKKIMEFMKNNGCNPN 308
           +F+ MVSK    PD +T N LIDG           FC+ G V+ A+ + + M +NG +P+
Sbjct: 207 MFDLMVSK-GCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPD 265

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           +    TL+ G C+ GKL++A E+F   +   +  DT     +IN  C+  +VDEA +L  
Sbjct: 266 IVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFN 325

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            +   G + D+VT+NI++G   +EG    A  +  ++   GI  +  +Y  +++  C++ 
Sbjct: 326 SLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQN 385

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            LE+A +++  M+  G  P   T + L+   CKAG  +D       + + G   ++ ++ 
Sbjct: 386 RLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYN 445

Query: 489 LLVELICRGRKLLFAFELLDELV 511
            L+   C+   L  A ++ +E+V
Sbjct: 446 ALIHGFCKVGDLNGAQDIFEEMV 468



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 175/343 (51%), Gaps = 32/343 (9%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY++++D   ++ + E    +   M  + C   + I LN +     C   +R     H I
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCS-PDIITLNTL--IDGCCRAKR-----HLI 238

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCK 214
           H                    +   V++AQ+  +   SN    + P+    N L+   C+
Sbjct: 239 HG-----------------FCQVGNVNVAQDLFQEMISNG---VSPDIVTCNTLLAGLCE 278

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
            G LE A E+ K  +KS+M   +  T + +I+G+CK  +  EA +LF  +   + +  D 
Sbjct: 279 NGKLEKALEMFKVFQKSKMDL-DTATCNIIINGMCKGNKVDEAWDLFNSL-PVNGVETDV 336

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +TYN+LI  F + G   RA+ I   M   G  P+   Y ++++GFCK+ +L+EA+++ D 
Sbjct: 337 VTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDS 396

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M +    PD + ++TLI  +C+AGRVD+ LEL  EM +RG  AD +T+N ++ G C+ G 
Sbjct: 397 MVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGD 456

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +  A  + E++   G+  +  ++R +L   C K EL+K + +L
Sbjct: 457 LNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 196/395 (49%), Gaps = 18/395 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  IF  + E KG   N  TY  ++D    Y K+   + +LR M           F  L+
Sbjct: 99  AQNIFTEMHE-KGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALI 157

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK-PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
             F          E++ ++  + R   P+    S+ ++   + ++++ A++         
Sbjct: 158 NAFVKEGKVSGAEELYREM--LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSK- 214

Query: 197 RLKPNTCIFNILI------KHH-----CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
              P+    N LI      K H     C+ G +  A ++ +EM  + +S P+++T +TL+
Sbjct: 215 GCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVS-PDIVTCNTLL 273

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
            GLC+NG+  +A+E+F+ +  K ++  D  T N++I+G C+G KVD A  +   +  NG 
Sbjct: 274 AGLCENGKLEKALEMFK-VFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGV 332

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
             +V  Y  L+  F KEG    A++++ EM    + P T+ Y ++++ FC+  R++EA +
Sbjct: 333 ETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQ 392

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           ++  M   GC  D+VTF+ ++ G C+ G++++ L +  ++   G+  +  +Y  +++  C
Sbjct: 393 MVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFC 452

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           + G+L  A ++   M+  G  P   T   +L  LC
Sbjct: 453 KVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLC 487



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 146/282 (51%), Gaps = 12/282 (4%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N++T++TL++GLC+ GR  +A+ L + MV +    PDA+TY  +++G C+ G    A  +
Sbjct: 9   NVVTFTTLMNGLCREGRVLQALALVDRMVEEGH-QPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +  M  +    NV  Y+ +++  CK+G   +A+ +F EM    + P+ + Y  +I+ +C 
Sbjct: 68  LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCS 127

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G+  +A +LL++M ER    D+VTF+ ++    +EGK+  A  +  ++    I+    +
Sbjct: 128 YGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTIT 187

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA------GMAE---- 466
           Y  +++  C+   LE A  +  LM+ +G  P   T N L+   C+A      G  +    
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247

Query: 467 DAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           + A  LF  ++  G  P+  +   L+  +C   KL  A E+ 
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF 289



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 121/226 (53%), Gaps = 4/226 (1%)

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E+ LEMF K+   ++        +  +N + + N+VD A +    S     ++ +   +N
Sbjct: 283 EKALEMF-KVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFN-SLPVNGVETDVVTYN 340

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ILI    K G    A ++  EM    +  P+ +TY++++DG CK  R  EA ++ + MVS
Sbjct: 341 ILIGVFVKEGNFLRAEDIYLEMLCKGI-IPSTVTYNSMVDGFCKQNRLEEARQMVDSMVS 399

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            +   PD +T++ LI G+C+ G+VD   ++   M   G   +   Y  L++GFCK G L 
Sbjct: 400 -EGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLN 458

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            A+++F+EM +  + PDTI + +++   C    + + L +L+++++
Sbjct: 459 GAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 110/214 (51%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC  NV  +TTLMNG C+EG++ +A  + D M     +PD + Y T++N  C+ G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
              AL +L++M E   KA++V ++ I+  LC++G   +A  +  ++   GI+ N  +Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C  G+   A +LLR M+ R   P   T + L+    K G    A      ++   
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P + +++ +++  C+  +L  A  + D +V K
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSK 214


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 189/369 (51%), Gaps = 41/369 (11%)

Query: 190 KYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           KY ++ L   L PN  ++ +LI  H K G L  A  + + +    +  P++ T S  I G
Sbjct: 564 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV-LPDVQTCSAFIHG 622

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L KNGR +EA+++F E+  K  ++PD  TY+ LI GFC+ G+V++A ++ + M   G  P
Sbjct: 623 LLKNGRVQEALKVFSELKEKG-LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 681

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N+F Y  L++G CK G +Q A+++FD M    L+PD++ Y+T+I+ +C++  V EA  L 
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741

Query: 368 KEMKERG---------------CK-------------------ADIVTFNIILGGLCREG 393
            EM  +G               CK                   A  ++FN ++ G C+  
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSC 801

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           KI+EA  + +++    I  +  +Y  V+++ C+ G++E+A  L + M  R  +    T  
Sbjct: 802 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            L+    K G + +       +V  G KP+  ++ L++   C+   L+ AF+L DE+V K
Sbjct: 862 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921

Query: 514 ---ESGTIQ 519
                GTI 
Sbjct: 922 GMLTKGTIH 930



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 205/436 (47%), Gaps = 22/436 (5%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++KG N N   Y+ +++ + +    +    + R M  +    +   +  +          
Sbjct: 255 DEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRM 314

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP------ 200
                 F ++   T  KP   A S  ++  +    +D          + LR+K       
Sbjct: 315 NEAKLTFEEMQK-TGLKPDYNACSALIDGFMREGDID----------EVLRIKDVMVSCG 363

Query: 201 ---NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
              N   +N+LI   CK G +E A E+LK M  +    PN  T+  LI+G C+      A
Sbjct: 364 IPINLITYNVLIHGLCKFGKMEKAAEILKGMV-TLGCKPNSRTFCLLIEGYCREHNMGRA 422

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +EL +EM  K  ++P A++Y  +I+G C    +  A K++E M  +G  PNV  Y+ L+ 
Sbjct: 423 LELLDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIM 481

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            +  EG+++EA+ + D M    + PD   Y  +I+C  +AG+++EA   L E++ RG K 
Sbjct: 482 AYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 541

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VTF   + G  + GK+ EA    +++   G+  N   Y +++N   + G L +A+ + 
Sbjct: 542 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R +   G LP   T +  +  L K G  ++A      L E G  P+  +++ L+   C+ 
Sbjct: 602 RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661

Query: 498 RKLLFAFELLDELVIK 513
            ++  AFEL DE+ +K
Sbjct: 662 GEVEKAFELHDEMCLK 677



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 206/430 (47%), Gaps = 8/430 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE-- 147
           G   N  TY  ++  L ++ K E    +L+ M    CK +   F  L++ +  C  H   
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGY--CREHNMG 420

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R LE+  ++       PS  +    +N L     + LA   L+       LKPN  +++I
Sbjct: 421 RALELLDEMEK-RNLVPSAVSYGAMINGLCHCKDLSLANKLLE-KMTFSGLKPNVVVYSI 478

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +   G +E A  +L  M  S ++ P++  Y+ +I  L K G+  EA     E+  +
Sbjct: 479 LIMAYASEGRIEEARRLLDGMSCSGVA-PDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 537

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PDA+T+   I G+ + GK+  A K  + M ++G  PN   YT L+NG  K G L E
Sbjct: 538 G-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F  +    + PD    +  I+   + GRV EAL++  E+KE+G   D+ T++ ++ 
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G C++G++E+A  + +++   GI  N   Y  +++  C+ G++++A +L   M  +G  P
Sbjct: 657 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 716

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T + ++   CK+    +A      +   G +P S  +  LV   C+   +  A  L 
Sbjct: 717 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 776

Query: 508 DELVIKESGT 517
            E++ K   T
Sbjct: 777 REMLQKGFAT 786



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+ + + E++    +  +Y  +++ L   K     + +L +MT+   K +  ++  L+
Sbjct: 422 ALELLDEM-EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILI 480

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             +++    E    +   +   +   P +   +  ++ L ++ +++ A  +L    Q   
Sbjct: 481 MAYASEGRIEEARRLLDGM-SCSGVAPDIFCYNAIISCLSKAGKMEEASTYL-LEIQGRG 538

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+   F   I  + K G +  A +   EM    +  PN   Y+ LI+G  K G   EA
Sbjct: 539 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL-MPNNPLYTVLINGHFKAGNLMEA 597

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + +F  + +   +LPD  T +  I G  + G+V  A K+   +K  G  P+VF Y++L++
Sbjct: 598 LSIFRRLHALG-VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK+G++++A E+ DEM    + P+   Y  L++  C++G +  A +L   M E+G + 
Sbjct: 657 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 716

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT++ ++ G C+   + EA  +  ++   G+  +   Y  +++  C++G++EKA+ L 
Sbjct: 717 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 776

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R ML +GF    +  N L+   CK+   ++A+     ++     P+  ++  +++  C+ 
Sbjct: 777 REMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 835

Query: 498 RKLLFAFELLDEL 510
            K+  A  L  E+
Sbjct: 836 GKMEEANLLFKEM 848



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 195/378 (51%), Gaps = 18/378 (4%)

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
           HF   +L E  L +F ++H +    P ++  S  ++ L+++ +V  A        +   L
Sbjct: 588 HFKAGNLME-ALSIFRRLHALGV-LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK-GL 644

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   ++ LI   CK+G +E AFE+  EM    ++ PN+  Y+ L+DGLCK+G  + A 
Sbjct: 645 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA-PNIFIYNALVDGLCKSGDIQRAR 703

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF+ M  K  + PD++TY+ +IDG+C+   V  A  +   M + G  P+ F Y  L++G
Sbjct: 704 KLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762

Query: 319 FCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            CKEG +++A  +F EM  K F     T+ + TLI+ +C++ ++ EA +L +EM  +   
Sbjct: 763 CCKEGDMEKAMNLFREMLQKGF---ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 819

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D VT+  ++   C+ GK+EEA  + +++    + ++  +Y  ++    + G+  +   L
Sbjct: 820 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL----VEMGFKPESDSWALLVE 492
              M+ +G  P   T   ++   CK    ED  +  F L    V  G   +     LL+ 
Sbjct: 880 FEKMVAKGVKPDEVTYGLVIYAHCK----EDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 935

Query: 493 LICRGRKLLFAFELLDEL 510
            +C+   L  A +LLDE+
Sbjct: 936 ALCKREDLTEASKLLDEM 953



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 155/294 (52%), Gaps = 3/294 (1%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            L+P++  ++ +I  +CK   +  AF +  EM  S+   P+   Y+ L+ G CK G   +A
Sbjct: 714  LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP-SKGVQPHSFVYNALVHGCCKEGDMEKA 772

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            + LF EM+ K       L++N LIDG+C+  K+  A ++ + M      P+   YTT+++
Sbjct: 773  MNLFREMLQKG--FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              CK GK++EA  +F EM+   L  DT+ YT+L+  + + G+  E   L ++M  +G K 
Sbjct: 831  WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 890

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            D VT+ +++   C+E  + EA  + +++   G+      + +++   C++ +L +A +LL
Sbjct: 891  DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 950

Query: 438  RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
              M   G  P  A  N L+    +AG  ++A     G+  +G  P++ +   LV
Sbjct: 951  DEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 1004



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 168/355 (47%), Gaps = 22/355 (6%)

Query: 176 LIESNQVDLAQ---NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           ++  NQV   +   +F  +S   + +      F+IL    C       A  VL +M ++ 
Sbjct: 77  VLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTP 136

Query: 233 MSYPNL----------------ITYSTLIDGLCKNGRFREAIELFEEMVSK-DQILPDAL 275
            S  ++                + +  LID   + G   EA  +F   V+K D IL   +
Sbjct: 137 YSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVF--FVAKNDSILISLI 194

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
             N L+    + G ++   K+   M +     +V+ YT L+   CK G L+ AK V  EM
Sbjct: 195 RCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEM 254

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
               L P+   Y+ +I   C+ G +DEA+EL + M E+G   +  T+ II  GLCR  ++
Sbjct: 255 DEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRM 314

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            EA    E++   G+  +  +   +++   ++G++++ + +  +M+  G   +  T N L
Sbjct: 315 NEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVL 374

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  LCK G  E AA  L G+V +G KP S ++ LL+E  CR   +  A ELLDE+
Sbjct: 375 IHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 429



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 187/402 (46%), Gaps = 43/402 (10%)

Query: 76   QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
            Q AL++F+ + E KG   +  TY++++    +  + E    +  +M  +    +  I+  
Sbjct: 630  QEALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688

Query: 136  LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
            L+         +R  ++F  + P    +P     ST ++   +S  V  A+ F  +    
Sbjct: 689  LVDGLCKSGDIQRARKLFDGM-PEKGLEPDSVTYSTMIDGYCKSENV--AEAFSLFHEMP 745

Query: 196  LR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
             + ++P++ ++N L+   CK G +E A  + +EM   Q  +   ++++TLIDG CK+ + 
Sbjct: 746  SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML--QKGFATTLSFNTLIDGYCKSCKI 803

Query: 255  REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +EA +LF+EM++K QI+PD +TY  +ID  C+ GK++ A  + + M+      +   YT+
Sbjct: 804  QEASQLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 862

Query: 315  LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY--------------------------- 347
            LM G+ K G+  E   +F++M    +KPD + Y                           
Sbjct: 863  LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 922

Query: 348  --------TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
                      LI   C+   + EA +LL EM E G K  +   N ++      GK++EA 
Sbjct: 923  MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEAT 982

Query: 400  GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
             + E +   G+  +  +   ++N +    + E A  L++ ++
Sbjct: 983  RVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 169/358 (47%), Gaps = 7/358 (1%)

Query: 48   DTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
            + C+     + FI +     L K   + Q A ++F+ + E KG   ++ TY+T++D   +
Sbjct: 673  EMCLKGIAPNIFIYNALVDGLCK-SGDIQRARKLFDGMPE-KGLEPDSVTYSTMIDGYCK 730

Query: 108  YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK 167
             +      ++  +M  +  + H  ++  L+         E+ + +F ++  + +   +  
Sbjct: 731  SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM--LQKGFATTL 788

Query: 168  AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            + +T ++   +S ++  A    +      ++ P+   +  +I  HCK G +E A  + KE
Sbjct: 789  SFNTLIDGYCKSCKIQEASQLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 847

Query: 228  MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
            M++  +   + +TY++L+ G  K G+  E   LFE+MV+K  + PD +TY ++I   C+ 
Sbjct: 848  MQERNL-IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG-VKPDEVTYGLVIYAHCKE 905

Query: 288  GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
              +  A K+ + +   G       +  L+   CK   L EA ++ DEM    LKP     
Sbjct: 906  DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 965

Query: 348  TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
             TL+  F  AG++DEA  + + +K  G   D  T   ++ G   +   E+A  ++++L
Sbjct: 966  NTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023


>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
 gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 225/461 (48%), Gaps = 57/461 (12%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM------ 121
           L+K +K+   +LE FN++      +    T++ IL  L +  KF++  ++LR +      
Sbjct: 49  LLKIQKDHVLSLEFFNSLKTLNPISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSI 108

Query: 122 ------------TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
                       +Y  C     +F +L K +++ +      ++F ++       P++++ 
Sbjct: 109 DLPGKLFDTLLFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGF-LPTVESC 167

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +  L+ L++ ++VD+A  F +                                    EM+
Sbjct: 168 NAYLSSLLDFHRVDIALTFYR------------------------------------EMR 191

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           + ++S PN  T++ ++  LCK+G+  +A+E+  EM S   I P+ ++YN LI G C  G 
Sbjct: 192 RCRIS-PNSYTFNLVLSALCKSGKLEKAVEVLREMESVG-ITPNVVSYNTLIAGHCNKGL 249

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +  A K+   M  NG  PNV  + +L++GFCKEGKL EA   F EMK   + P+T+ Y T
Sbjct: 250 LSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNT 309

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LIN + + G  + A ++ +EM   G KADI+T+N ++ GLC+EGK ++A  ++++L  + 
Sbjct: 310 LINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKEN 369

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N ++Y  +++  C +   ++A +L + M+  G  P+  T   L     K    E A 
Sbjct: 370 LVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAF 429

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             L  +       +S++   + + +C+  K   A +L  E+
Sbjct: 430 NVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEM 470



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 3/272 (1%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           + +L        +FR A ++F  M  KD   LP   + N  +       +VD A      
Sbjct: 132 FDSLFKTYAHMNKFRNATDVFSRM--KDYGFLPTVESCNAYLSSLLDFHRVDIALTFYRE 189

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+    +PN + +  +++  CK GKL++A EV  EM++  + P+ + Y TLI   C  G 
Sbjct: 190 MRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGL 249

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +  A +L   M + G + ++VTFN ++ G C+EGK+ EA     ++    +  N  +Y  
Sbjct: 250 LSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNT 309

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++N   Q G    A ++   M+  G      T N L++ LCK G  + AA  +  L +  
Sbjct: 310 LINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKEN 369

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
             P + +++ L+   C  +    AF+L   +V
Sbjct: 370 LVPNASTYSALISGQCARKNSDRAFQLYKSMV 401



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 55/276 (19%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQI-LPDALTYNVLIDGFCRGGKVDRAKKI 296
           L T+S ++  L K  +F+ A  +   +++   I LP  L ++ L+  +            
Sbjct: 76  LETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKL-FDTLLFSY------------ 122

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
               +    +P VF+  +L   +    K + A +VF  MK++   P        ++    
Sbjct: 123 ----RMCDSSPRVFD--SLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLD 176

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
             RVD AL   +EM+      +  TFN++L  L                           
Sbjct: 177 FHRVDIALTFYREMRRCRISPNSYTFNLVLSAL--------------------------- 209

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
                   C+ G+LEKA+E+LR M   G  P+  + N L+   C  G+   A      + 
Sbjct: 210 --------CKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMG 261

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           + G +P   ++  L+   C+  KL  A     E+ +
Sbjct: 262 KNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKV 297


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 176/310 (56%), Gaps = 2/310 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   ++IL+   CK G + SA  +L+EM+K   + PN++TY+ ++   CKNG + +  
Sbjct: 327 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA-PNVVTYTIVLHSFCKNGMWDDTR 385

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L EEM +K   L ++  YN +I   C+ G++D A  +++ M++ GCNP++ +Y T++  
Sbjct: 386 ALLEEMSAKGLTL-NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 444

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C   +++EA+ +F+ +    +  + I Y T+I+   R GR  +A+ L KEM   GC  D
Sbjct: 445 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 504

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +V++N ++  +C++G ++ +L +LE++   GI  N  SY I+++  C++  +  A+EL +
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 564

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            ML +G  P   T N L+  LCK G    A   L  L      P+  ++ +L+   C+ R
Sbjct: 565 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVR 624

Query: 499 KLLFAFELLD 508
            L  A  LL+
Sbjct: 625 LLDDAAMLLN 634



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 168/312 (53%), Gaps = 6/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +  L++  C+    + A  +L  + +      N++ ++T+I G    G+  EA E
Sbjct: 262 PGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-----NVVLFNTVIGGCLAEGKLAEATE 316

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+E M  K    PDA TY++L+ G C+ G++  A +++  M+  G  PNV  YT +++ F
Sbjct: 317 LYETMGLKG-CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 375

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G   + + + +EM    L  ++ GY  +I   C+ GR+DEA+ L++EM+ +GC  DI
Sbjct: 376 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 435

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            ++N I+  LC   ++EEA  M E L  +G+  N  +Y  +++   + G  + A+ L + 
Sbjct: 436 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 495

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G      + N L+  +CK G  + + + L  + E G KP + S+ +L+  +C+ R+
Sbjct: 496 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 555

Query: 500 LLFAFELLDELV 511
           +  A EL  +++
Sbjct: 556 VRDALELSKQML 567



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 161/347 (46%), Gaps = 33/347 (9%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ P T  F +  +  C+ G  + A  +L+ M +     P+ + Y T+I  LC  G   E
Sbjct: 154 RVPPTTFTFGVAARALCRLGRADEALALLRGMAR-HGCVPDAVLYQTVIHALCDQGGVTE 212

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L  EM+       D  T++ ++ G C  G+V  A ++++ M   GC P V  Y  L+
Sbjct: 213 AATLLNEMLLMG-CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271

Query: 317 NGFCK-------------------------------EGKLQEAKEVFDEMKNFLLKPDTI 345
            G C+                               EGKL EA E+++ M     +PD  
Sbjct: 272 QGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 331

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y+ L++  C+ GR+  A+ LL+EM+++G   ++VT+ I+L   C+ G  ++   +LE++
Sbjct: 332 TYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 391

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+ LN   Y  ++   C+ G +++A+ L++ M  +G  P   + N ++  LC     
Sbjct: 392 SAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQM 451

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           E+A      L+E G      ++  ++  + R  +   A  L  E+++
Sbjct: 452 EEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 498



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 5/289 (1%)

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           F + + M       P   T+      LC+ GR  EA+ L   M ++   +PDA+ Y  +I
Sbjct: 143 FALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGM-ARHGCVPDAVLYQTVI 201

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
              C  G V  A  ++  M   GC  +V  +  ++ G C  G+++EA  + D M      
Sbjct: 202 HALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCM 261

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  + Y  L+   CR  + DEA  +L  + E     ++V FN ++GG   EGK+ EA  +
Sbjct: 262 PGVMTYGFLLQGLCRVRQADEARAMLGRVPE----LNVVLFNTVIGGCLAEGKLAEATEL 317

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            E +   G   +  +Y I+++  C+ G +  A+ LLR M  +GF P+  T   +L   CK
Sbjct: 318 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 377

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            GM +D    L  +   G    S  +  ++  +C+  ++  A  L+ E+
Sbjct: 378 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 426



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 156/321 (48%), Gaps = 45/321 (14%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+KGF  N  TY  +L    +   ++   A+L +M+ +      G+ LN           
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK------GLTLNS---------- 400

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTC 203
                               +  +  +  L +  ++D A   +    Q +R +   P+ C
Sbjct: 401 --------------------QGYNGMIYALCKDGRMDEAMGLI----QEMRSQGCNPDIC 436

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N +I H C    +E A  + + + +  +   N ITY+T+I  L ++GR+++A+ L +E
Sbjct: 437 SYNTIIYHLCNNEQMEEAEHMFENLLEEGV-VANGITYNTIIHALLRDGRWQDAVRLAKE 495

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+     L D ++YN LI   C+ G VDR+  ++E M   G  PN  +Y  L++  CKE 
Sbjct: 496 MILHGCSL-DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKER 554

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++++A E+  +M N  L PD + Y TLIN  C+ G +  AL LL+++       DI+T+N
Sbjct: 555 RVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYN 614

Query: 384 IILGGLCREGKIEEALGMLEK 404
           I++   C+   +++A  +L +
Sbjct: 615 ILISWHCKVRLLDDAAMLLNR 635


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 154/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEM 413



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 150/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 232 NELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 130/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TLI GLCK G  ++A  L +EM  K  + PD +TY  L
Sbjct: 266 AMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG-LKPDKITYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 142/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L  Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 18  TLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E +                   G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFE 338



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E   +Q S  +J  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAIXETXGTQRS--DJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFD 108

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGF--------YEEILE----CGYPASLYFFNILMHRFCKDG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 157 DIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 217 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T N L+  LCK G                                    L  A
Sbjct: 277 SLSPDLITYNTLIYGLCKKG-----------------------------------DLKQA 301

Query: 504 FELLDELVIK 513
             L+DE+ +K
Sbjct: 302 HHLIDEMSVK 311


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 220/451 (48%), Gaps = 47/451 (10%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNAT-----YATILDKLARYKKFEAVDAV---L 118
           ++I   K P+ AL+ F +V +Q   N NN T     Y+ ++  L   K +     +   L
Sbjct: 32  TIILHSKTPEQALDTFTSVLKQ---NPNNPTKKLHLYSAVIHYLTGAKVYPTARCLTKDL 88

Query: 119 RQMTYETC-------------------KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPI 159
            Q   ++C                   KF+  +F  L+  FS   L +  L ++ K+   
Sbjct: 89  IQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKVGAF 148

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTL 218
               P+++A +  LN L++ +  D+      Y+N    RL P    +N+L+   C++G +
Sbjct: 149 ----PAVQACNALLNGLLKKSSFDIMWEL--YNNMVSRRLFPTVVTYNVLVDACCRQGDV 202

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-ILPDALTY 277
             A  ++ EM K  +  P ++ Y+TLI GLC   +  EA  +F +M  KD  + P+  TY
Sbjct: 203 LRAKSLISEMVKKGIE-PTVVIYTTLIHGLCSESKLMEAESMFRQM--KDSGVFPNLYTY 259

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           NVL+DG+C+   V +A  + + M ++G  PNV  +  L++  CK  +L  A+  F +M  
Sbjct: 260 NVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAK 319

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
           F + P+ + + +LI+ + +AG   EA +LL EM++     D+ T++I++   CR G +EE
Sbjct: 320 FGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEE 379

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL------MLCRGFLPHYAT 451
           A  +L+++  +G+  N   Y  +++  C++G +EKA+E+ +       M   G  P    
Sbjct: 380 ADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALA 439

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
              +L     A    D  +    +++MG  P
Sbjct: 440 YAVMLQGHLNAKHMADVMMLHADMIKMGIVP 470



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 5/309 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           K N  +F +LI    + G ++ A  V  ++     ++P +   + L++GL K   F    
Sbjct: 116 KFNPSVFGVLIIAFSEVGLVDEALRVYLKVG----AFPAVQACNALLNGLLKKSSFDIMW 171

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           EL+  MVS+ ++ P  +TYNVL+D  CR G V RAK ++  M   G  P V  YTTL++G
Sbjct: 172 ELYNNMVSR-RLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHG 230

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C E KL EA+ +F +MK+  + P+   Y  L++ +C+   V +AL L + M + G + +
Sbjct: 231 LCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPN 290

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VTF I++  LC+  ++  A     ++   G+  N   +  +++   + G   +A +LL 
Sbjct: 291 VVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLL 350

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M      P   T + L+   C+ G  E+A   L  + + G    S  +  L++  C+  
Sbjct: 351 EMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEG 410

Query: 499 KLLFAFELL 507
            +  A E+ 
Sbjct: 411 NMEKALEIF 419


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 154/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRLAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 150/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 232 NELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 130/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TLI GLCK G  ++A  L +EM  K  + PD +TY  L
Sbjct: 266 AMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG-LKPDKITYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 145/321 (45%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 18  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIYVFSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIME-FMKNN---------------G 304
           L    L  GF R                 +D  +K++E  MK                 G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFE 338



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD- 273
           +G+  + F  + E + +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAILETRGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPID 108

Query: 274 ----------ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGF--------YEEILEC----GYPASLYFFNILMHRFCKDG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 157 DIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 217 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T N L+  LCK G                                    L  A
Sbjct: 277 SLSPDLITYNTLIYGLCKKG-----------------------------------DLKQA 301

Query: 504 FELLDELVIK 513
             L+DE+ +K
Sbjct: 302 HHLIDEMSVK 311


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 183/369 (49%), Gaps = 40/369 (10%)

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           C NL+ +  + ++   F K     +  K  P+   +  +IK HCK G +     VL EM+
Sbjct: 210 CNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME 269

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           K     PNL TY+  I GLC+ G   EA+E+ + M+ K  + PD  TY +L+DGFC+  +
Sbjct: 270 KE--CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG-LGPDGHTYTLLVDGFCKQKR 326

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK-------- 341
              AK I E M ++G NPN F YT L++GF KEG ++EA  + DEM    LK        
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386

Query: 342 ---------------------------PDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
                                      PDT  Y  LI+ + ++  + +A ELL EMK R 
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
                 T+++++ GLC    +++A  +L+++  +G+  N   Y  ++    Q+   E AI
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ELL++M+  G LP     N L++ LC+A   E+A + L  + E G KP + ++   + L 
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566

Query: 495 CRGRKLLFA 503
            +  ++  A
Sbjct: 567 SKSGEIQVA 575



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 209/450 (46%), Gaps = 7/450 (1%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           +K  + A  IF ++    G N N  TY  ++D   +    E    +  +M     K +  
Sbjct: 324 QKRSKEAKLIFESMPSS-GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            +  ++   +      + + +F+++     E P     +  ++  ++S+ +  A   L  
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE-PDTWTYNLLIDGYLKSHDMAKACELLAE 441

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                +L P+   +++LI   C    L+ A EVL +M ++ +  PN+  Y TLI    + 
Sbjct: 442 MKAR-KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK-PNVFMYGTLIKAYVQE 499

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R+  AIEL + M++ + +LPD   YN LI G CR  KV+ AK ++  M   G  PN   
Sbjct: 500 SRYEMAIELLKIMIA-NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y   +N + K G++Q A+  F +M +  + P+ + YT LI   C  G   EAL   K M 
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+G   DI  ++ I+  L + GK +EA+G+  K    G+  +   Y  +++  C++G++E
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 432 KAIELLRLMLCRGFLPHYATSNELL--VRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           KA +L   ML  G  P+    N L+     CK+G   +A      ++  G  P+   + +
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 738

Query: 490 LVELICRGRKLLFAFELLDELVIKESGTIQ 519
           L++   +   L  A  L  E   K  G++ 
Sbjct: 739 LIDGCGKEGNLEKALSLFHEAQQKSVGSLS 768



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 183/384 (47%), Gaps = 39/384 (10%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP+       +NL  +S ++ +A+ + K       + PN  I+ ILIK HC  G    A 
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFK-DMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
              K M +  +  P++  YS +I  L KNG+ +EA+ +F + + K  ++PD   YN LI 
Sbjct: 612 STFKCMLEKGL-IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL-KTGVVPDVFLYNSLIS 669

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN--GFCKEGKLQEAKEVFDEMKNFLL 340
           GFC+ G +++A ++ + M +NG NPN+  Y TL+N  G+CK G L EA ++FDEM +  +
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGI 729

Query: 341 KPD------------------------------TIG----YTTLINCFCRAGRVDEALEL 366
            PD                              ++G    + +LI+ FC+ G+V EA EL
Sbjct: 730 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAREL 789

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             +M ++    +IVT+ I++    +   +EEA  +   +    I  N  +Y  +L    Q
Sbjct: 790 FDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQ 849

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G   K I L + M  RG          +    CK G + +A   L   +  G K E D 
Sbjct: 850 IGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV 909

Query: 487 WALLVELICRGRKLLFAFELLDEL 510
           +  L+  +C+ +++    ELL E+
Sbjct: 910 FDALIFHLCKEKQISTVLELLSEM 933



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 212/451 (47%), Gaps = 51/451 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG   N  TY   ++  ++  + +  +   + M       +  I+  L+K   +     
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608

Query: 148 RVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTC 203
             L  F        EK   P ++A S  ++ L ++ +   A   FLK+    +   P+  
Sbjct: 609 EALSTFK----CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV--PDVF 662

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID--GLCKNGRFREAIELF 261
           ++N LI   CK G +E A ++  EM  + ++ PN++ Y+TLI+  G CK+G   EA +LF
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGIN-PNIVVYNTLINDYGYCKSGNLTEAFKLF 721

Query: 262 EEMVSKDQILPDALTYNVLIDG----------------------------------FCRG 287
           +EM+SK  I PD   Y +LIDG                                  FC+ 
Sbjct: 722 DEMISKG-ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKH 780

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           GKV  A+++ + M +    PN+  YT L++ + K   ++EA+++F +M+   + P+T+ Y
Sbjct: 781 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 840

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T+L+  + + G   + + L K+M+ RG   D + + ++    C+EGK  EAL +L K   
Sbjct: 841 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 900

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
           +GI L    +  ++   C++ ++   +ELL  M          T N LL+   K+G  ++
Sbjct: 901 EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 960

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGR 498
           A+  L  +  +G+ P S S   L + I  GR
Sbjct: 961 ASKVLGVMQRLGWVPTSLS---LTDSISTGR 988



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 162/312 (51%), Gaps = 3/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P     N L++   K   +   ++V   M ++++  P++ TY+ +I   CK G   +   
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKI-VPDVYTYTNVIKAHCKVGDVIKGKM 263

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  EM  + +  P+  TYN  I G C+ G VD A ++ + M   G  P+   YT L++GF
Sbjct: 264 VLSEM--EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGF 321

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ + +EAK +F+ M +  L P+   YT LI+ F + G ++EAL +  EM  RG K ++
Sbjct: 322 CKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNV 381

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++GG+ + G++ +A+ +  ++   GI  +  +Y ++++   +  ++ KA ELL  
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAE 441

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  R   P   T + L+  LC +   + A   L  ++  G KP    +  L++   +  +
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 500 LLFAFELLDELV 511
              A ELL  ++
Sbjct: 502 YEMAIELLKIMI 513



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 152/334 (45%), Gaps = 57/334 (17%)

Query: 231 SQMSYPN-LITYSTLIDGLCKNGRFREAIELFEEMVSKDQI---LPDALT---------- 276
           S+MS P  L +YS L   LC +G   +A  + E+++   +    + D+L           
Sbjct: 112 SKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSN 171

Query: 277 ---YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
              +++ ID F   G ++ A  +     + G  P +     LM    K   +    +V+ 
Sbjct: 172 LTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYG 231

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M    + PD   YT +I   C+ G V +   +L EM E+ CK ++ T+N  +GGLC+ G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290

Query: 394 KIEEALG----MLEK----------LWYD---------------------GIYLNKASYR 418
            ++EAL     M+EK          L  D                     G+  N+ +Y 
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG-MAEDAAIALFGLVE 477
            +++   ++G +E+A+ +   M+ RG   +  T N ++  + KAG MA+  A++LF  + 
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK--AMSLFNEML 408

Query: 478 M-GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           M G +P++ ++ LL++   +   +  A ELL E+
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 226/465 (48%), Gaps = 49/465 (10%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +   +  +L  L A  +  +A+D VLR+MT   C  +   +  L+K   + +  
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRS 174

Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----P 200
           +  LE+ H +         P + + +T +N   +    D A     YS  H  L     P
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA-----YSTYHEMLDRGILP 229

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +N +I   CK   ++ A EVL  M K+ +  P+ +TY++++ G C +G+ +EAI  
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV-MPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M S D + PD +TY++L+D  C+ G+   A+KI + M   G  P +  Y TL+ G+ 
Sbjct: 289 LKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA 347

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +G L E   + D M    + PD   ++ LI  + + G+VD+A+ +  +M+++G   + V
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407

Query: 381 TFNIILGGLCREGKIEEALGMLEKL------------------------WY--------- 407
           T+  ++G LC+ G++E+A+   E++                        W          
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467

Query: 408 --DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              GI LN   +  +++  C++G + ++ +L  LM+  G  P+  T N L+   C AG  
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           ++A   L G+V +G KP + +++ L+   C+  ++  A  L  E+
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 173/314 (55%), Gaps = 3/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           PN   +NIL+K  C     + A E+L  M   +   S P++++Y+T+I+G  K G   +A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              + EM+ +  ILPD +TYN +I   C+   +D+A +++  M  NG  P+   Y ++++
Sbjct: 216 YSTYHEMLDRG-ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C  G+ +EA     +M++  ++PD + Y+ L++  C+ GR  EA ++   M +RG K 
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I T+  +L G   +G + E  G+L+ +  +GI+ +   + I++    ++G++++A+ + 
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G  P+  T   ++  LCK+G  EDA +    +++ G  P +  +  L+  +C  
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454

Query: 498 RKLLFAFELLDELV 511
            K   A EL+ E++
Sbjct: 455 NKWERAEELILEML 468



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 206/426 (48%), Gaps = 14/426 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY+ ++D L +  +      +   MT    K     +  L++ ++       +
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT---KGAL 352

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
           +EM   +  + R    P     S  +    +  +VD  Q  L +S    + L PN   + 
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD--QAMLVFSKMRQQGLNPNAVTYG 410

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G +E A    ++M    +S P  I Y++LI GLC   ++  A EL  EM+ 
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNSLIHGLCTCNKWERAEELILEMLD 469

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I  + + +N +ID  C+ G+V  ++K+ E M   G  PNV  Y TL+NG+C  GK+ 
Sbjct: 470 RG-ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++   M +  LKP+T+ Y+TLIN +C+  R+++AL L KEM+  G   DI+T+NIIL
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL +  +   A  +  ++   G  +  ++Y I+L+  C+    + A+++ + +      
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
               T N ++  L K G  ++A          G  P   ++ L+ E I  G+ LL   E 
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII-GQGLL---EE 704

Query: 507 LDELVI 512
           LD+L +
Sbjct: 705 LDQLFL 710



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 161/301 (53%), Gaps = 12/301 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+ C + ILI   C+ G L+  F  L  + K      + I ++ L+ GLC + R  +A
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 141

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTT 314
           +++    +++   +P+  +YN+L+ G C   +   A +++  M ++   G  P+V +YTT
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++NGF KEG   +A   + EM +  + PD + Y ++I   C+A  +D+A+E+L  M + G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D +T+N IL G C  G+ +EA+G L+K+  DG+  +  +Y +++++ C+ G   +A 
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWALL 490
           ++   M  RG  P   T   LL      G    A + + GL+++    G  P+   +++L
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 491 V 491
           +
Sbjct: 378 I 378



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 191/428 (44%), Gaps = 54/428 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F+ +  Q+G N N  TY  ++  L +  + E       QM  E       ++ +L+
Sbjct: 390 AMLVFSKM-RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 138 KHFSNCSLHER----VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
                C+  ER    +LEM  +                CLN                   
Sbjct: 449 HGLCTCNKWERAEELILEMLDR--------------GICLN------------------- 475

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTL---ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
                   T  FN +I  HCK G +   E  FE++  +       PN+ITY+TLI+G C 
Sbjct: 476 --------TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK----PNVITYNTLINGYCL 523

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G+  EA++L   MVS   + P+ +TY+ LI+G+C+  +++ A  + + M+++G +P++ 
Sbjct: 524 AGKMDEAMKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y  ++ G  +  +   AKE++  +     + +   Y  +++  C+    D+AL++ + +
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
                K +  TFNI++  L + G+ +EA  +      +G+  N  +YR++      +G L
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           E+  +L   M   G        N ++  L + G    A   L  + E  F  E+ + +L 
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLF 762

Query: 491 VELICRGR 498
           ++L+  G+
Sbjct: 763 IDLLSGGK 770



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 129/283 (45%), Gaps = 39/283 (13%)

Query: 268 DQILPDALTYNVLIDGFCRGGKVD--------------------------------RAKK 295
           D++ PD  TY +LI   CR G++D                                R   
Sbjct: 81  DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140

Query: 296 IMEF----MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYT 348
            M+     M   GC PNVF+Y  L+ G C E + QEA E+   M   +     PD + YT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           T+IN F + G  D+A     EM +RG   D+VT+N I+  LC+   +++A+ +L  +  +
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G+  +  +Y  +L+  C  G+ ++AI  L+ M   G  P   T + L+  LCK G   +A
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                 + + G KPE  ++  L++       L+    LLD +V
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 197/383 (51%), Gaps = 12/383 (3%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNF 188
           +F  L+K   + +  +   E F+ +    +EK  L  I TC   L+L ++ N+ + A  +
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTM----KEKGVLPTIETCNSLLSLFLKLNRTEAA--W 206

Query: 189 LKYSNQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           + Y+    LR+K +   FNI+I   CK G L+ A + +  M+ S +  PN++TY+T++ G
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVK-PNIVTYNTIVHG 265

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C +GR   A  +   M  + +I PD+ TY  LI G C+ G+++ A KI E M   G  P
Sbjct: 266 YCSSGRVEAADAILTTM-KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y TL++GFC +G L  A    DEM    + P    Y +LI+      R DEA  ++
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           KE++E+G   D +T+NI++ G CR    ++A  + +++   GI   K +Y  +L+   +K
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
             +++A +L + +   G LP     N L+   C     + A   L  +  M   P+  ++
Sbjct: 445 NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504

Query: 488 ALLVELICRGRKLLFAFELLDEL 510
             +++  CR  K+  A EL DE+
Sbjct: 505 NTIMQGHCREGKVEEARELFDEM 527



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 207/427 (48%), Gaps = 46/427 (10%)

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           T ETC     +FL L +  +   L+    EMF       R K S+   +  +N+L +  +
Sbjct: 185 TIETCNSLLSLFLKLNRTEAAWVLYA---EMFR-----LRIKSSVYTFNIMINVLCKEGK 236

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           +  A++F+ +      +KPN   +N ++  +C  G +E+A  +L  MK+ ++  P+  TY
Sbjct: 237 LKKAKDFVGHMETS-GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE-PDSFTY 294

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM- 300
            +LI G+CK GR  EA ++FEEMV K  + P A+ YN LIDGFC  G +D A    + M 
Sbjct: 295 GSLISGMCKQGRLEEASKIFEEMVQKG-LRPSAVIYNTLIDGFCNKGNLDMASAYKDEML 353

Query: 301 ----------------------------------KNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                                             +  G +P+   Y  L+NG+C+    +
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAK 413

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A  + DEM    +KP    YT+L++   +  R+ EA +L K++   G   D + FN ++
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C    ++ A  +L+ +    +  ++ ++  ++   C++G++E+A EL   M  RG  
Sbjct: 474 DGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIK 533

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P + + N L+    + G  +DA      +++ GF P   ++  LV+ +C+ ++   A EL
Sbjct: 534 PDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEEL 593

Query: 507 LDELVIK 513
           L E+V K
Sbjct: 594 LKEMVSK 600



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 2/299 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+  I+N LI   C +G L+ A     EM K  +S P + TY++LI  L    R  EA
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGIS-PTMSTYNSLIHALFMEQRTDEA 380

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + +E+  K  I PDA+TYN+LI+G+CR     +A  + + M  +G  P    YT+L++
Sbjct: 381 ECMIKEIQEKG-ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              K+ +++EA ++F ++ +  + PD I +  LI+  C    V  A ELLK+M       
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VTFN I+ G CREGK+EEA  + +++   GI  +  S+  +++   ++G+++ A  + 
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             ML  GF P   T N L+  LCK    + A   L  +V  G  P+  ++  L+E I +
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 20/363 (5%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH--------HCKR 215
           PSL  IS  L  L ES QV L  +FL + +  L      C+  +++          H  R
Sbjct: 66  PSL--ISQTLLNLHESPQVVL--DFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLR 121

Query: 216 -----GTLESAFEVLKEMKKSQ--MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
                GT  S  E+ + +  S+  + + + I +  LI   C   R  EA E F  M  K 
Sbjct: 122 QALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKG 181

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LP   T N L+  F +  + + A  +   M       +V+ +  ++N  CKEGKL++A
Sbjct: 182 -VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKA 240

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           K+    M+   +KP+ + Y T+++ +C +GRV+ A  +L  MK +  + D  T+  ++ G
Sbjct: 241 KDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISG 300

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +C++G++EEA  + E++   G+  +   Y  +++  C KG L+ A      ML +G  P 
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPT 360

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            +T N L+  L      ++A   +  + E G  P++ ++ +L+   CR      AF L D
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420

Query: 509 ELV 511
           E++
Sbjct: 421 EML 423



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 7/232 (3%)

Query: 287 GGKVDRAKKIMEFMKNN----GCNPN-VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           GG  +  ++I EF+  +    G   + VF+Y  L+   C   +  EA E F  MK   + 
Sbjct: 126 GGTTNSIREIFEFLAASRDRLGFKSSIVFDY--LIKSCCDMNRADEAFECFYTMKEKGVL 183

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P      +L++ F +  R + A  L  EM     K+ + TFNI++  LC+EGK+++A   
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           +  +   G+  N  +Y  +++  C  G +E A  +L  M  +   P   T   L+  +CK
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G  E+A+     +V+ G +P +  +  L++  C    L  A    DE++ K
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK 355


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 166/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGNLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G+ P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGNLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  + +++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 148/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLR-PSVVSFNTLMNGYIKLGNLDEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M +NG  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L  EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAP 414



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 153/299 (51%), Gaps = 19/299 (6%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q+S  ++  +S LI    ++G  R+AIE +         L   
Sbjct: 45  KGSASAVFAAILETKGTQIS--DIYVFSGLITAYLESGFLRDAIECYR--------LTKE 94

Query: 275 LTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQ 326
             + V  D  CR       K+   K +  F + +   G   +++ +  LM+ F KEG+++
Sbjct: 95  HKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIR 153

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+ VFD +  + L+P  + + TL+N + + G +DE   L   M+  G + D+ T+++++
Sbjct: 154 LAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLI 213

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+E K+++A  + +++  +G+  N  ++  +++  C+ G ++ A+E+ + ML +   
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           P   T N L+  LCK G  + A      +   G KP+  ++  L++  C+   L  AFE
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFE 332


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 166/314 (52%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    + ILI+     G +  A ++L+EM    +  P++ TY+ +I G+CK G    A E
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGL-LPDMYTYNAIIRGMCKEGMVERAAE 263

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   + SK    PD ++YN+L+  F   GK D  +K++  M + GC PN   Y+ L++  
Sbjct: 264 LITSLTSKG-CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G++ EA  V   M    L PDT  Y  LI+  C+ GR+D A+ ++  M   GC  DI
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V +N IL  LC+ G   +AL +  KL   G   N +SY  +++     G+  +A+ ++  
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P   T N L+  LC+ G+ E+A   L  + + GF+P   S+ +++  +C+ R+
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502

Query: 500 LLFAFELLDELVIK 513
           +  A  +  E++ K
Sbjct: 503 IDDAIGMFAEMIEK 516



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 161/293 (54%), Gaps = 2/293 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N +I   CK   +E+A +VL  MK ++   P+++TY+ +I  LC   +   A+
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMK-ARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ++ ++++  D  +P  +TY +LI+     G ++ A K++E M   G  P+++ Y  ++ G
Sbjct: 193 KVLDQLL-LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 251

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKEG ++ A E+   + +   KPD I Y  L+  F   G+ DE  +L+ EM  RGC+ +
Sbjct: 252 MCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 311

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            VT++I++  LCR G+I+EA+ +L+ +    +  +  SY  +++  C++G L+ AI ++ 
Sbjct: 312 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 371

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            M+  G LP     N +L  LCK G A  A      L  MG  P   S+  ++
Sbjct: 372 YMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 424



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 168/317 (52%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N +I+  CK G +E A E++  +  S+   P++I+Y+ L+      G++ E 
Sbjct: 238 LLPDMYTYNAIIRGMCKEGMVERAAELITSLT-SKGCKPDVISYNILLRAFLNQGKWDEG 296

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L  EM S+    P+ +TY++LI   CR G++D A  +++ M      P+ ++Y  L++
Sbjct: 297 EKLVAEMFSRG-CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLIS 355

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CKEG+L  A  + D M +    PD + Y T++   C+ G  ++ALE+  +++  GC  
Sbjct: 356 ALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 415

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ ++N ++  L   G    ALGM+  +   G+  ++ +Y  +++  C+ G +E+AI LL
Sbjct: 416 NVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLL 475

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   GF P   + N +L+ LCK    +DA      ++E G +P   ++ LL+E I   
Sbjct: 476 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFA 535

Query: 498 RKLLFAFELLDELVIKE 514
                A EL + L  ++
Sbjct: 536 GWRTEAMELANSLFSRD 552



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 162/311 (52%), Gaps = 3/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  +   LIK       +E A  V++ ++    + P++  Y+ +I G CK  R   A +
Sbjct: 101 PDVILCTKLIKGFFNFKNIEKASRVMEILESH--TEPDVFAYNAVISGFCKVNRIEAATQ 158

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M ++   LPD +TYN++I   C   K+  A K+++ +  + C P V  YT L+   
Sbjct: 159 VLNRMKARG-FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEAT 217

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             EG + EA ++ +EM    L PD   Y  +I   C+ G V+ A EL+  +  +GCK D+
Sbjct: 218 IVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDV 277

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++NI+L     +GK +E   ++ +++  G   NK +Y I+++  C+ G +++AI +L++
Sbjct: 278 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 337

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +   P   + + L+  LCK G  + A   +  ++  G  P+  ++  ++  +C+   
Sbjct: 338 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 397

Query: 500 LLFAFELLDEL 510
              A E+ ++L
Sbjct: 398 ANQALEIFNKL 408



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 3/304 (0%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+   CK G    +   L+ +     + P++I  + LI G        +A  + E + S 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYT-PDVILCTKLIKGFFNFKNIEKASRVMEILESH 132

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +  PD   YN +I GFC+  +++ A +++  MK  G  P++  Y  ++   C   KL  
Sbjct: 133 TE--PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGL 190

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A +V D++      P  I YT LI      G ++EA++LL+EM  RG   D+ T+N I+ 
Sbjct: 191 ALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 250

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G+C+EG +E A  ++  L   G   +  SY I+L     +G+ ++  +L+  M  RG  P
Sbjct: 251 GMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 310

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T + L+  LC+ G  ++A   L  ++E    P++ S+  L+  +C+  +L  A  ++
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370

Query: 508 DELV 511
           D ++
Sbjct: 371 DYMI 374


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + ++G L+  F +   M  S +  P++ TYS LI+GLCK  +  EA
Sbjct: 167 LRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQ-PDVYTYSVLINGLCKESKMDEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF EM+ K  ++P+ +T+  LIDG C+ GKVD A +I + M +   +P++  Y TL+ 
Sbjct: 226 NELFXEMLDKG-LVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A+ + +EM    LKPD I YTTLI+  C+ G ++ A E  K M E   + 
Sbjct: 285 GLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++    +LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLL 404

Query: 438 RLMLCRGFLPHYAT 451
           + M   G +P   T
Sbjct: 405 KEMQRDGHVPSVVT 418



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 190/351 (54%), Gaps = 7/351 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLES 220
           ++  +   S  +   +ES  +  A    + + +H  R+  +TC    +++H  K    + 
Sbjct: 62  QRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTC--RKVLEHLMKLKYFKL 119

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            +   KE+   +  YP +L  ++ L+   CK G  R +  +F+  + K  + P  +++N 
Sbjct: 120 VWGFYKEI--LECGYPASLYFFNILMHRFCKEGEIRLSQSVFDA-IRKWGLRPSVVSFNT 176

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L++G+ R G +D+  ++   M  +G  P+V+ Y+ L+NG CKE K+ EA E+F EM +  
Sbjct: 177 LMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKG 236

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + +TTLI+  C+ G+VD A+E+ K+M  +    D++T+N ++ GLC++G +++A 
Sbjct: 237 LVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAR 296

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            ++ ++   G+  +K +Y  +++ SC+ G+LE A E  + M+             L+  L
Sbjct: 297 NLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGL 356

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           C+ G + DA   L  ++ +G KP+S ++ +++   C+   +    +LL E+
Sbjct: 357 CQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 154/308 (50%), Gaps = 25/308 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           + +  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 45  KDSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFD 102

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         K+I+E     G   +++ +  LM+ FCKEG
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGF--------YKEILEC----GYPASLYFFNILMHRFCKEG 150

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +++ ++ VFD ++ + L+P  + + TL+N + R G +D+   L   M   G + D+ T++
Sbjct: 151 EIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYS 210

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K++EA  +  ++   G+  N  ++  +++  C+ G+++ A+E+ + ML +
Sbjct: 211 VLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQ 270

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T N L+  LCK G  + A   +  +   G KP+  ++  L++  C+   L  A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETA 330

Query: 504 FELLDELV 511
           FE    ++
Sbjct: 331 FEYRKRMI 338


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 154/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 154 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 212

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 213 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 271

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 272 GLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 331

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 332 DEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLL 391

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 392 KEMQRDGHVPSVVTYNVLM 410



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 176

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 177 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 236

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++    +  
Sbjct: 237 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKP 296

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 297 DKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKML 356

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP+S ++ +++   C+   +    +LL E+
Sbjct: 357 REMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEM 394



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 132/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 190 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 246

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TLI GLCK G  ++A  L +EM S  ++ PD +TY  L
Sbjct: 247 AMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAHHLIDEM-SMKELKPDKITYTTL 304

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM N  L
Sbjct: 305 IDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGL 364

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD+  YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 365 KPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 155 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 212

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 213 NELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 270

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M      P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 271 YGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 330

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 331 LDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKL 390

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 391 LKEMQRDGHVPSVVTYNVLMN 411



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 52/318 (16%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDALTY 277
           +Y T+I  LC      EA  L + +VS+                      D  +   L  
Sbjct: 2   SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61

Query: 278 NVLIDGFCRGG--------------KVDRAKKIME-FMKNN---------------GCNP 307
             L  GF R                  D  +K++E  MK                 G   
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ 
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +     KP+  ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITY 301

Query: 488 ALLVELICRGRKLLFAFE 505
             L++  C+   L  AFE
Sbjct: 302 TTLIDGCCKEGDLDSAFE 319



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 60/311 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  +L  +S LI    ++G  R+AIE +         +P  
Sbjct: 32  KGSASAVFAAIVETKGTQRS--DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFD 89

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 90  TCRKVLEHLMKLKYFKLVWGF--------YEEILEC----GYPASLYFFNILMHRFCKDG 137

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 138 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 197

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 198 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 257

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T N L+  LCK G                                    L  A
Sbjct: 258 SLSPDLITYNTLIYGLCKKG-----------------------------------DLKQA 282

Query: 504 FELLDELVIKE 514
             L+DE+ +KE
Sbjct: 283 HHLIDEMSMKE 293


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 176/346 (50%), Gaps = 37/346 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I  H K+G LES F +  +M +  +  PN+ITY+ L+ GLC+ GR  E   
Sbjct: 221 PNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLK-PNVITYNVLLSGLCRAGRMGETAA 279

Query: 260 LFEEMVSKDQILPDALTYNVLIDG-----------------------------------F 284
           + +EM S+ +++PD  TY++L DG                                    
Sbjct: 280 VLDEMASR-KMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGL 338

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ GK+ +A+++++ + N+G       Y TL+NG+C+ G L+ A  +F +MK+ L++PD 
Sbjct: 339 CKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDH 398

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I Y  LIN   +  R+ EA +L+ EM++ G    + TFN ++    R G++E+   +L  
Sbjct: 399 ITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD 458

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+  N  SY  ++N  C+ G++ +A+ +L  M  +  LP     N ++    + G 
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + A +    +   G  P   ++ LL++ +C+  ++  A ELLD L
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSL 564



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 188/379 (49%), Gaps = 10/379 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  TY  +L  L R  +     AVL +M           +  L    S     +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 148 RVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            +L +F +    + +K       TC   LN L +  ++  A+  L+       L+  T I
Sbjct: 311 TMLSLFEE----SVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQ-TTVI 365

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI  +C+ G LE AF + ++MK S++  P+ ITY+ LI+GL K  R  EA +L  EM
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMK-SRLIRPDHITYNALINGLGKVERITEAHDLVIEM 424

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K+ + P   T+N LID + R G++++   I+  M+  G  PNV +Y +++N FCK GK
Sbjct: 425 -EKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA  + D+M    + P    Y  +I+ +   G  D+A  L ++MK  G    IVT+N+
Sbjct: 484 ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNL 543

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC++ +I EA  +L+ L   G+  +  SY  +++  C +   ++A+EL + M   G
Sbjct: 544 LIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCG 603

Query: 445 FLPHYATSNELLVRLCKAG 463
             P   T   L   L  AG
Sbjct: 604 IKPSPRTYRMLFSSLGGAG 622



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 167/353 (47%), Gaps = 36/353 (10%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R +P+T  +N  ++     G L+ A  +L+ M       PN  +Y+ +I GL K G   +
Sbjct: 147 RARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCD 206

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A++LF+EM  K  ++P+ +TYN +IDG  + G ++   ++   M  +G  PNV  Y  L+
Sbjct: 207 AVKLFDEMPEK-AVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLL 265

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G C+ G++ E   V DEM +  + PD   Y+ L +   R G     L L +E  ++G K
Sbjct: 266 SGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVK 325

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
               T +I+L GLC++GKI +A  +L+ L   G+      Y  ++N  CQ G+LE A  +
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSI 385

Query: 437 LRLMLCRGFLPHYATSNELLVRLCK----------------------------------- 461
            + M  R   P + T N L+  L K                                   
Sbjct: 386 FQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           AG  E   I L  + E G KP   S+  +V   C+  K+L A  +LD++ IK+
Sbjct: 446 AGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKD 498



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           + Q  L +F   S +KG      T + +L+ L +  K    + VL+ +          I+
Sbjct: 308 DSQTMLSLFEE-SVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIY 366

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             L+  +      E    +F ++      +P     +  +N L +  ++  A + +    
Sbjct: 367 NTLINGYCQIGDLEGAFSIFQQMKS-RLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           ++  + P+   FN LI  + + G LE  F +L +M++  +  PN+++Y ++++  CKNG+
Sbjct: 426 KN-GVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLK-PNVVSYGSIVNAFCKNGK 483

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA+ + ++M  KD +LP A  YN +ID +   G  D+A  + E MK++G  P++  Y 
Sbjct: 484 ILEAVAILDDMFIKD-VLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYN 542

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G CK+ ++ EA+E+ D ++N+ L PD I Y TLI+  C     D ALEL KEM + 
Sbjct: 543 LLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKC 602

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K    T+ ++   L   G++ E   + +++    +      Y I+++   + GE E  
Sbjct: 603 GIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGE-ESK 661

Query: 434 IELLR 438
           +E LR
Sbjct: 662 VEALR 666



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 169/365 (46%), Gaps = 40/365 (10%)

Query: 183 DLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           DL   F  +S Q LR  LKPN   +N+L+   C+ G +     VL EM   +M  P+  T
Sbjct: 238 DLESGFRLWS-QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKM-VPDGFT 295

Query: 241 YSTLIDG-----------------------------------LCKNGRFREAIELFEEMV 265
           YS L DG                                   LCK+G+  +A E+ + +V
Sbjct: 296 YSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLV 355

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +   +L   + YN LI+G+C+ G ++ A  I + MK+    P+   Y  L+NG  K  ++
Sbjct: 356 NSG-LLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERI 414

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA ++  EM+   + P    + TLI+ + RAG++++   +L +M+E+G K ++V++  I
Sbjct: 415 TEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSI 474

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +   C+ GKI EA+ +L+ ++   +      Y  +++   + G  ++A  L   M   G 
Sbjct: 475 VNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P   T N L+  LCK     +A   L  L   G  P+  S+  L+   C       A E
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594

Query: 506 LLDEL 510
           L  E+
Sbjct: 595 LEKEM 599



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 22/286 (7%)

Query: 32  VIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGF 91
           VI+      +P VET +T +DA        +G A  L KC         I  +  ++KG 
Sbjct: 421 VIEMEKNGVNPSVETFNTLIDA--------YGRAGQLEKC--------FIILSDMQEKGL 464

Query: 92  NHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLE 151
             N  +Y +I++   +  K     A+L  M  +       ++  ++  +  C   ++   
Sbjct: 465 KPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFM 524

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +  K+   +   PS+   +  +  L + +Q+  A+  L  S ++  L P+   +N LI  
Sbjct: 525 LAEKMKS-SGVPPSIVTYNLLIKGLCKQSQISEAEELLD-SLRNYGLAPDVISYNTLISA 582

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            C R   + A E+ KEM K  +  P+  TY  L   L   GR  E   L+++M+ KD ++
Sbjct: 583 CCYRSNTDRALELEKEMWKCGIK-PSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKD-VV 640

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           P +  YN+++D + + G+  + + + + M + G    V +YT++ N
Sbjct: 641 PCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI--AVGDYTSMTN 684



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 36/259 (13%)

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNY----------------------------------- 312
           G+    +   E +      P+ F +                                   
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 313 -TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
              ++ G  K G   +A ++FDEM    + P+ I Y T+I+   + G ++    L  +M 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
             G K +++T+N++L GLCR G++ E   +L+++    +  +  +Y I+ +   + G+ +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             + L    + +G      T + LL  LCK G    A   L  LV  G    +  +  L+
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 492 ELICRGRKLLFAFELLDEL 510
              C+   L  AF +  ++
Sbjct: 371 NGYCQIGDLEGAFSIFQQM 389


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 224/464 (48%), Gaps = 62/464 (13%)

Query: 73  KEPQCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           ++ +  L+ F+ VS  Q     N   Y+++L  LAR + F  ++ VL  M  E       
Sbjct: 71  RDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTRE 130

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
               +++ +S+  L E+ LE+++ +       P + A ++ LN+L++  ++++A+ F   
Sbjct: 131 AMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKF--- 187

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                     TCI   ++K  CK G LE   +++++ +  Q   PN+I Y+TLIDG CK 
Sbjct: 188 ----------TCI---MVKGLCKEGKLEEGRKLIED-RWGQGCIPNIIFYNTLIDGYCKK 233

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK---VDR---------------- 292
           G    A  LF E+  K   LP   TY  +I+GFC+ G    +DR                
Sbjct: 234 GDMEMANGLFIELKLKG-FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 292

Query: 293 ----------------AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
                           A + +E M   GC P++  Y TL++G C++GK+ EA ++ ++  
Sbjct: 293 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 352

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              L P+   YT LI+ +C+ G  D A   L EM ERG K D+VT+  ++ GL   G+++
Sbjct: 353 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 412

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH---YATSN 453
            AL + EK+   G++ +   Y I+++  C+K +L  A  LL  ML +  LP    YAT  
Sbjct: 413 VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 472

Query: 454 ELLVRLCKAGMAEDAAIALFGL-VEMGFKPESDSWALLVELICR 496
           +  +R        D A  LF L +E G  P    +  +++  C+
Sbjct: 473 DGFIRNGNL----DEARKLFELTIEKGMNPGIVGYNAMIKGYCK 512



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 174/342 (50%), Gaps = 25/342 (7%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID----------- 246
           + P     +I+I+ +   G +E A E+   + K+   +P++I  ++L++           
Sbjct: 125 MSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184

Query: 247 ---------GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
                    GLCK G+  E  +L E+   +  I P+ + YN LIDG+C+ G ++ A  + 
Sbjct: 185 RKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCI-PNIIFYNTLIDGYCKKGDMEMANGLF 243

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             +K  G  P V  Y  ++NGFCK+G  +    +  EM +  L  +   Y T+I+   + 
Sbjct: 244 IELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKH 303

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G + +A+E ++ M E GCK DIVT+N ++ G CR+GK+ EA  +LE+    G+  NK SY
Sbjct: 304 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 363

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++  C++G  ++A   L  M  RG  P   T   L+  L  AG  + A      ++E
Sbjct: 364 TPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLE 423

Query: 478 MGFKPESDSWALLVELICRGRKL----LFAFELLDELVIKES 515
            G  P++  + +L+  +C+  KL    L   E+LD+ V+ ++
Sbjct: 424 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDA 465



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 135/279 (48%), Gaps = 37/279 (13%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  N  ++N +I    K G +  A E ++ M +     P+++TY+TLI G C++G+  EA
Sbjct: 286 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCK-PDIVTYNTLISGSCRDGKVSEA 344

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK---------------------- 295
            +L E+ + K  ++P+  +Y  LI  +C+ G  DRA                        
Sbjct: 345 DQLLEQALGKG-LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVH 403

Query: 296 -------------IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
                        I E M   G  P+   Y  LM+G CK+ KL  AK +  EM +  + P
Sbjct: 404 GLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLP 463

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   Y TL++ F R G +DEA +L +   E+G    IV +N ++ G C+ G +++A+  +
Sbjct: 464 DAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACI 523

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
            ++    +  ++ +Y  V++   ++ +L+ A ++ R M+
Sbjct: 524 NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV 562



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 41/328 (12%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF     TY  I++   +   F+A+D +L +M       +  ++  ++        H  
Sbjct: 249 KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK---HGH 305

Query: 149 VLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +++    I  +     KP +   +T ++      +V  A   L+ +     L PN   + 
Sbjct: 306 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK-GLMPNKFSYT 364

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +CK+G  + A   L EM +     P+L+TY  L+ GL   G    A+ + E+M+ 
Sbjct: 365 PLIHAYCKQGGYDRASNWLIEMTERGHK-PDLVTYGALVHGLVVAGEVDVALTIREKMLE 423

Query: 267 K---------------------------------DQ-ILPDALTYNVLIDGFCRGGKVDR 292
           +                                 DQ +LPDA  Y  L+DGF R G +D 
Sbjct: 424 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 483

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A+K+ E     G NP +  Y  ++ G+CK G +++A    + MK   L PD   Y+T+I+
Sbjct: 484 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 543

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIV 380
            + +   +D A ++ +EM +  CK +++
Sbjct: 544 GYVKQHDLDGAQKMFREMVKMKCKPNVM 571



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 61/306 (19%)

Query: 44  VETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD 103
           V+  +T +DAR +   I    A+  I+   E  C  +I               TY T++ 
Sbjct: 290 VQVYNTIIDARYKHGHIVK--AVETIEGMIECGCKPDI--------------VTYNTLIS 333

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER----VLEMFHKIHPI 159
              R  K    D +L Q   +    ++  +  L+  +     ++R    ++EM  + H  
Sbjct: 334 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH-- 391

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
              KP L      ++ L+ + +VD+A   ++       + P+  I+NIL+   CK+  L 
Sbjct: 392 ---KPDLVTYGALVHGLVVAGEVDVALT-IREKMLERGVFPDAGIYNILMSGLCKKFKLP 447

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD----------- 268
           +A  +L EM   Q   P+   Y+TL+DG  +NG   EA +LFE  + K            
Sbjct: 448 AAKLLLAEML-DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAM 506

Query: 269 -----------------------QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
                                   + PD  TY+ +IDG+ +   +D A+K+   M    C
Sbjct: 507 IKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKC 566

Query: 306 NPNVFN 311
            PNV +
Sbjct: 567 KPNVMD 572


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 167/287 (58%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NXLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A +  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A +  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 148/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLR-PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M +N   PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 158/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  S F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASSVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++  + +  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AF+
Sbjct: 314 YTTLIDGNCKEGDLETAFK 332


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 163/278 (58%), Gaps = 3/278 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  ++  +I   CK G  E A ++L  M    +  PN++ Y+T++ GLC   R+ EA +
Sbjct: 256 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK-PNVVCYNTVLKGLCSAERWEEAED 314

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  +D  L D +T+N+L+D FC+ G VDR  +++E M  +GC P+V  YTT++NGF
Sbjct: 315 LLAEMFQEDCPLDD-VTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG + EA  +   M     KP+TI YT ++   CRA R  +A EL+  M ++GC  + 
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 433

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VTFN ++  +C++G  E+A+ +L+++  +G   +  SY  V++   + G+ E+A+ELL +
Sbjct: 434 VTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
           M+ +G  P+    + +   L + G   D  I +F  ++
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRT-DKIIQMFDSIQ 530



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 172/317 (54%), Gaps = 10/317 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N+++   C++G ++   E+L+++  S    P++++Y+ ++ GLC   R+ +  EL  EMV
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLP-SFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV 240

Query: 266 SKDQIL---------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
              + L         PD   Y  +IDG C+ G  + A  I+  M + G  PNV  Y T++
Sbjct: 241 RVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVL 300

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            G C   + +EA+++  EM       D + +  L++ FC+ G VD  +ELL++M E GC 
Sbjct: 301 KGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCI 360

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D++T+  ++ G C+EG ++EA+ +L+ +   G   N  SY IVL   C+      A EL
Sbjct: 361 PDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQEL 420

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           +  M+ +G LP+  T N L+  +CK G+AE A   L  ++  G  P+  S++ +++ + +
Sbjct: 421 ISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 480

Query: 497 GRKLLFAFELLDELVIK 513
             K   A ELL+ ++ K
Sbjct: 481 AGKTEEALELLNVMINK 497



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 193/389 (49%), Gaps = 14/389 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAV----------LRQMTYETCKFHEGIFLNLMKH 139
           G   +  +Y  +L  L   K+++ V+ +          L QM    C     ++  ++  
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDG 267

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
                 HE   ++  ++ P    KP++   +T L  L  + + + A++ L    Q     
Sbjct: 268 ICKDGHHEVANDILSRM-PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE-DCP 325

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            +   FNIL+   C+ G ++   E+L++M +     P++ITY+T+I+G CK G   EA+ 
Sbjct: 326 LDDVTFNILVDFFCQNGLVDRVIELLEQMLE-HGCIPDVITYTTVINGFCKEGLVDEAVM 384

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L + M S     P+ ++Y +++ G CR  +   A++++  M   GC PN   + TL+N  
Sbjct: 385 LLKNM-SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM 443

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+G  ++A E+  +M      PD I Y+T+I+   +AG+ +EALELL  M  +G   + 
Sbjct: 444 CKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT 503

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           + ++ +   L REG+ ++ + M + +    +  + A Y  V++  C++ E ++AI+    
Sbjct: 504 IIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAY 563

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           M+  G +P+ +T   L+  L   G+  +A
Sbjct: 564 MVSNGCMPNESTYTILIRGLASEGLVREA 592



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 164/325 (50%), Gaps = 14/325 (4%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFRE 256
           + PN   +  +++  C RG +  A  VL EM  +   + P +     +++  C+ G FR 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMC--HVILEAACRGGGFRS 161

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+   + + +K   L D+   N+++   C  G VD   +++  + + GC P++ +Y  ++
Sbjct: 162 AVRALQVLHAKGCTL-DSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 317 NGFCKEGKLQEAKEV----------FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            G C   +  + +E+            +M      PD   Y T+I+  C+ G  + A ++
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 280

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L  M   G K ++V +N +L GLC   + EEA  +L +++ +   L+  ++ I+++F CQ
Sbjct: 281 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 340

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G +++ IELL  ML  G +P   T   ++   CK G+ ++A + L  +   G KP + S
Sbjct: 341 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 400

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           + ++++ +CR  + + A EL+  ++
Sbjct: 401 YTIVLKGLCRAERWVDAQELISHMI 425



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 161/318 (50%), Gaps = 8/318 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N   Y T+L  L   +++E  + +L +M  E C   +  F  L+  F    L +RV
Sbjct: 288 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRV 347

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +E+  ++  H      P +   +T +N   +   VD A   LK +      KPNT  + I
Sbjct: 348 IELLEQMLEHGCI---PDVITYTTVINGFCKEGLVDEAVMLLK-NMSACGCKPNTISYTI 403

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           ++K  C+      A E++  M + Q   PN +T++TLI+ +CK G   +AIEL ++M+  
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQ-QGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLV- 461

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           +   PD ++Y+ +IDG  + GK + A +++  M N G  PN   Y+++ +   +EG+  +
Sbjct: 462 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDK 521

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
             ++FD +++  ++ D   Y  +I+  C+    D A++    M   GC  +  T+ I++ 
Sbjct: 522 IIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIR 581

Query: 388 GLCREGKIEEALGMLEKL 405
           GL  EG + EA  +L +L
Sbjct: 582 GLASEGLVREAQDLLSEL 599



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 54/322 (16%)

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S LI  LC  GR  +A    +       ++     YN +I G+CR G+V  A+++   + 
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAGVV----AYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK-----------NFLLKP-------- 342
                PN + Y  ++   C  G + +A  V DEM            + +L+         
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 343 ----------------DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
                           D+     +++  C  G VDE +ELL+++   GC+ DIV++N +L
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 387 GGLC---REGKIEEAL-------GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            GLC   R   +EE +         L ++   G   +   Y  +++  C+ G  E A ++
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 280

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M   G  P+    N +L  LC A   E+A   L  + +     +  ++ +LV+  C+
Sbjct: 281 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 340

Query: 497 GRKLLFAFELLDELVIKESGTI 518
              +    ELL++++  E G I
Sbjct: 341 NGLVDRVIELLEQML--EHGCI 360



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 6/209 (2%)

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           + L+   C  G+  +A    D   +       + Y  +I  +CRAG+V  A  L   +  
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGD---AAGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
                +  T+  I+  LC  G I +AL +L+++   G         ++L  +C+ G    
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+  L+++  +G        N ++  +C+ G  ++    L  L   G +P+  S+  +++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 493 LICRGRKLLFAFELLDELVIKESGTIQVP 521
            +C  ++     EL+ E+V       Q+P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMP 250


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 171/316 (54%), Gaps = 2/316 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           LR  P+    + L++   KRG +E A  ++K +    +S PNL  Y+ LID LCK  +F 
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS-PNLFVYNALIDSLCKGRKFH 384

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA  LF+ M  K  + P+ +TY++LID FCR GK+D A   +  M + G   +V+ Y +L
Sbjct: 385 EAELLFDRM-GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK G +  A+    EM N  L+P  + YT+L+  +C  G++++AL L  EM  +G 
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
              I TF  +L GL R G I +A+ +  ++    +  N+ +Y +++   C++G++ KA E
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            L+ M  +G +P   +   L+  LC  G A +A + + GL +   +     +  L+   C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623

Query: 496 RGRKLLFAFELLDELV 511
           R  KL  A  +  E+V
Sbjct: 624 REGKLEEALSVCQEMV 639



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 227/501 (45%), Gaps = 61/501 (12%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT----- 122
           LI    +P+  L  FN +   +GF+H+ A++  ++  L +   F    ++L+ +      
Sbjct: 77  LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALK 136

Query: 123 -----------YETCKFHEGIFLNLM-KHFSNCSLHERVLE---MFHKIHPITREKPSLK 167
                      YE CK       +L+ +H+       RVL+   +F  +       P ++
Sbjct: 137 PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVR---SRRVLDGVLVFKMMITKVSLLPEVR 193

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            +S  L+ L++     LA          + ++P+  I+  +I+  C+   L  A E++  
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFN-DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR- 286
           M+ +     N++ Y+ LIDGLCK  +  EA+ + +++  KD + PD +TY  L+ G C+ 
Sbjct: 253 MEATGCDV-NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD-LKPDVVTYCTLVYGLCKV 310

Query: 287 ----------------------------------GGKVDRAKKIMEFMKNNGCNPNVFNY 312
                                              GK++ A  +++ + + G +PN+F Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L++  CK  K  EA+ +FD M    L+P+ + Y+ LI+ FCR G++D AL  L EM +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G K  +  +N ++ G C+ G I  A G + ++    +     +Y  ++   C KG++ K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+ L   M  +G  P   T   LL  L +AG+  DA      + E   KP   ++ +++E
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550

Query: 493 LICRGRKLLFAFELLDELVIK 513
             C    +  AFE L E+  K
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEK 571



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 208/408 (50%), Gaps = 4/408 (0%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + N   Y  ++D L + +KF   + +  +M     + ++  +  L+  F      +  
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L    ++   T  K S+   ++ +N   +   +  A+ F+     + +L+P    +  L+
Sbjct: 422 LSFLGEMVD-TGLKLSVYPYNSLINGHCKFGDISAAEGFMA-EMINKKLEPTVVTYTSLM 479

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
             +C +G +  A  +  EM    ++ P++ T++TL+ GL + G  R+A++LF EM ++  
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIA-PSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWN 537

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + P+ +TYNV+I+G+C  G + +A + ++ M   G  P+ ++Y  L++G C  G+  EAK
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
              D +     + + I YT L++ FCR G+++EAL + +EM +RG   D+V + +++ G 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            +    +   G+L+++   G+  +   Y  +++   + G+ ++A  +  LM+  G +P+ 
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            T   ++  LCKAG   +A +    +  +   P   ++   ++++ +G
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 209/465 (44%), Gaps = 51/465 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK---HFSNCSLH 146
           G   N+ TY+ ++D   R  K +   + L +M     K     + +L+     F + S  
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456

Query: 147 ERVL-EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           E  + EM +K     + +P++   ++ +       +++ A   L +      + P+   F
Sbjct: 457 EGFMAEMINK-----KLEPTVVTYTSLMGGYCSKGKINKALR-LYHEMTGKGIAPSIYTF 510

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             L+    + G +  A ++  EM +  +  PN +TY+ +I+G C+ G   +A E  +EM 
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVK-PNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K  I+PD  +Y  LI G C  G+   AK  ++ +    C  N   YT L++GFC+EGKL
Sbjct: 570 EKG-IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628

Query: 326 QEAKEV-----------------------------------FDEMKNFLLKPDTIGYTTL 350
           +EA  V                                     EM +  LKPD + YT++
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+   + G   EA  +   M   GC  + VT+  ++ GLC+ G + EA  +  K+     
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748

Query: 411 YLNKASYRIVLNFSCQKGE--LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             N+ +Y   L+    KGE  ++KA+EL   +L +G L + AT N L+   C+ G  E+A
Sbjct: 749 VPNQVTYGCFLDI-LTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEA 806

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +  +  ++  G  P+  ++  ++  +CR   +  A EL + +  K
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 54/287 (18%)

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA------QNFLKYS 192
           H  NC L+E        +H   RE    +A+S C  ++     +DL          LK+ 
Sbjct: 604 HKGNCELNEICYTGL--LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661

Query: 193 NQHL-----------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           ++ L            LKP+  I+  +I    K G  + AF +  ++  ++   PN +TY
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW-DLMINEGCVPNEVTY 720

Query: 242 STLIDGLCKNGRFREAIEL------------------FEEMVSKDQI------------- 270
           + +I+GLCK G   EA  L                  F ++++K ++             
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780

Query: 271 ---LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              L +  TYN+LI GFCR G+++ A +++  M  +G +P+   YTT++N  C+   +++
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           A E+++ M    ++PD + Y TLI+  C AG + +A EL  EM  +G
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 217/437 (49%), Gaps = 43/437 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  N  TY T+++ L +     A   +LR M    C+          
Sbjct: 158 ALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ---------- 206

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHL 196
                                     P +   ++ ++ L +  QV  A N F K   Q  
Sbjct: 207 --------------------------PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ-- 238

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+   +  LI   C     +    +L +M  S++  P+++ +ST++D LCK G+  E
Sbjct: 239 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI-MPDVVIFSTVVDALCKEGKITE 297

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++ + M+ +  + P+ +TYN L+DG C   ++D A K+ + M +NG  PNV +Y TL+
Sbjct: 298 AHDVVDMMIIRG-VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK  ++ +A  +F+EM    L P+T+ Y TL++  C  GR+ +A+ L  EM   G  
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQI 415

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+ T+ I+L  LC++  ++EA+ +L+ +    +  +   Y IV++  C+ GELE A ++
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +  +G  P+  T   ++  LC+ G+ ++A      +   G  P+  ++  + + + +
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535

Query: 497 GRKLLFAFELLDELVIK 513
            ++ L A +LL E++ +
Sbjct: 536 NKEALRAIQLLQEMLAR 552



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 161/314 (51%), Gaps = 3/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+    NILI   C    L  AF VL ++ K     P+  T++TLI GLC  G+  +A
Sbjct: 100 IPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQ-PDTATFTTLIRGLCVEGKIGDA 158

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF++M+  +   P+ +TY  LI+G C+ G  + A +++  M+   C P+V  YT++++
Sbjct: 159 LHLFDKMIG-EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 217

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK+ ++ EA  +F +M    + PD   YT+LI+  C          LL +M       
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V F+ ++  LC+EGKI EA  +++ +   G+  N  +Y  +++  C + E+++A+++ 
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G+ P+  + N L+   CK    + A      + +    P + ++  L+   C  
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHV 396

Query: 498 RKLLFAFELLDELV 511
            +L  A  L  E+V
Sbjct: 397 GRLQDAIALFHEMV 410



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 2/320 (0%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H+   P+T  FN L+    K     + F +  +M    +  P++ T + LI+  C   R 
Sbjct: 62  HMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIP-PDVYTLNILINSFCHLNRL 120

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A  +  +++      PD  T+  LI G C  GK+  A  + + M   G  PNV  Y T
Sbjct: 121 GFAFSVLAKILKLGH-QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 179

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK G    A  +   M+    +PD + YT++I+  C+  +V EA  L  +M  +G
Sbjct: 180 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 239

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI T+  ++  LC   + +    +L ++    I  +   +  V++  C++G++ +A 
Sbjct: 240 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 299

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +++ +M+ RG  P+  T N L+   C     ++A      +V  G+ P   S+  L+   
Sbjct: 300 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 359

Query: 495 CRGRKLLFAFELLDELVIKE 514
           C+ +++  A  L +E+  KE
Sbjct: 360 CKIQRMDKATYLFEEMCQKE 379



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 2/188 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F+ M +    P T+ +  L+    +  +      L  +M   G   D+ T NI
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   ++  A  +L K+   G   + A++  ++   C +G++  A+ L   M+  G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLFA 503
           F P+  T   L+  LCK G   +AAI L   +E G  +P+   +  +++ +C+ R++  A
Sbjct: 170 FQPNVVTYGTLINGLCKVG-NTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228

Query: 504 FELLDELV 511
           F L  ++V
Sbjct: 229 FNLFSKMV 236


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 229/468 (48%), Gaps = 24/468 (5%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    +  ++  + P  AL  F  V E KGF HN  +Y  +++ L R +   A    + 
Sbjct: 93  LSKTTVLQTLQLIRTPAKALHFFRWV-EAKGFTHNEQSYFLMIEILGRSRNLNAARNFVF 151

Query: 120 QMTYET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
            +  ++    K  +  F +L++ +    L +  +++F  +  I    PS+   ++ L+++
Sbjct: 152 SIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVS-PSVVTFNSLLSIV 210

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           ++  +  +A+           + P+T  FNILI+  C    ++  F   KEM + +   P
Sbjct: 211 LKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCD-P 269

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKK 295
           +++TY+TL+DGLC+ G+ + A  + + MV K   L P+ +TY  LI G+C    +  A  
Sbjct: 270 DVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALS 329

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYTTLIN 352
           ++  M + G  PN   Y TL+ G C+  KL + KE+ + M     F+  PDT    TLI 
Sbjct: 330 LLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFI--PDTCTLNTLIK 387

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C  G+++EA  + ++M E   + D  T+++++  LC+ G    A    ++L    I L
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447

Query: 413 NK-------ASYRIVLNFSCQKGELEKAIELLRLMLCRGFL--PHYATSNELLVRLCKAG 463
           +        A+Y  +  + C  G+ +KA  + R ++ RG    P Y T   L++  C+ G
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKT---LILGHCREG 504

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             E     L  ++   F P+++++ L+++ + +    + A + L++++
Sbjct: 505 TPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 552



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 143/278 (51%), Gaps = 5/278 (1%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EF 299
           +++LI      G F+E+I++F+ M  +  + P  +T+N L+    + G+   AK++  E 
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTM-KEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEM 226

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +   G  P+ + +  L+ GFC    + E    F EM  F   PD + Y TL++  CRAG+
Sbjct: 227 LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286

Query: 360 VDEALELLKEM--KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           V  A  ++K M  K      ++VT+  ++ G C +  + EAL +L ++   G+  NK +Y
Sbjct: 287 VKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRG-FLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
             ++   C+  +L+K  E+L  M+  G F+P   T N L+   C  G  E+A      + 
Sbjct: 347 NTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMS 406

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           E+  +P+S ++++LV  +C+      A E  DEL  KE
Sbjct: 407 ELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKE 444



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 168/396 (42%), Gaps = 47/396 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P +   +T ++ L  + +V +A N +K    +   L PN   +  LI+ +C +  +  A 
Sbjct: 269 PDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEAL 328

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L EM    +  PN ITY+TLI GLC+  +  +  E+ E MV     +PD  T N LI 
Sbjct: 329 SLLAEMVSRGLK-PNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 387

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLL 340
             C  GK++ A  + E M      P+   Y+ L+   C+ G  + A+E FDE+  K  LL
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447

Query: 341 -----KP----------------------------------DTIGYTTLINCFCRAGRVD 361
                KP                                  D   Y TLI   CR G  +
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPE 507

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
              +LL  M  R    D  T+ +++ GL ++G    A   LEK+         A +  +L
Sbjct: 508 AGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSIL 567

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHY----ATSNELLVRLCKAGMAEDAAIALFGLVE 477
               +KG   ++  L++LML R    +      T  EL+  LC++    +A   L   +E
Sbjct: 568 AALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLE 627

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                + D  + ++  +C+  K+  AF L  ELV K
Sbjct: 628 KRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEK 663



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 169/408 (41%), Gaps = 44/408 (10%)

Query: 39  KADPPVETSDTCVDA--RKRSRFISHGAAISLIKCEKEP-------------------QC 77
           K DP V T +T VD   R     I+H     ++K  K P                   Q 
Sbjct: 266 KCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVK--KSPNLSPNVVTYTTLIRGYCMKQD 323

Query: 78  ALEIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
             E  + ++E   +G   N  TY T++  L   +K + +  +L  M  +     +   LN
Sbjct: 324 MAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLN 383

Query: 136 -LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSN 193
            L+K        E    +F K+  + R +P     S  +  L +      A+ F  + + 
Sbjct: 384 TLIKAHCTMGKLEEAFSVFEKMSEL-RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAE 442

Query: 194 QHLRL-----KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           + + L     KP    +N + ++ C  G  + A  V +++ K     P   +Y TLI G 
Sbjct: 443 KEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP--SYKTLILGH 500

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C+ G      +L   M+ +D  +PDA TY ++IDG  + G    A K +E M  +   P 
Sbjct: 501 CREGTPEAGFDLLVLMLRRD-FVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPT 559

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEM------KNFLLKPDTIGYTTLINCFCRAGRVDE 362
              + +++    ++G   E+  +   M      +N  L   T+    L++  C++ ++ E
Sbjct: 560 TAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTM--EELVSFLCQSRKLLE 617

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           A ++L    E+    DI   + ++ GLC+  K+ EA  +  +L   G+
Sbjct: 618 AQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGM 665


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 207/427 (48%), Gaps = 6/427 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   +  TY T++    R ++FEA   ++ +M        E     L+         + 
Sbjct: 289 KGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDD 348

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL-RLKPNTCIFNI 207
             E+  K+       P+L   +  +N L +   +D A+  L YSN  L  L+PN   ++I
Sbjct: 349 AYELVVKVGRFGF-VPNLFVYNALINSLCKGGDLDKAE--LLYSNMSLMNLRPNGITYSI 405

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   C+ G L+ A      M +  +    +  Y++LI+G CK G    A  LF EM +K
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIG-ETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + P A T+  LI G+C+  +V +A K+   M +NG  PNV+ +T L++G C   K+ E
Sbjct: 465 G-VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAE 523

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A E+FDE+    +KP  + Y  LI  +CR G++D+A ELL++M ++G   D  T+  ++ 
Sbjct: 524 ASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLIS 583

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC  G++ +A   ++ L    + LN+  Y  +L+  CQ+G L +A+     M+ RG   
Sbjct: 584 GLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINM 643

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                  L+    K    +     L  + + G +P++  +  +++   +      AFE  
Sbjct: 644 DLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECW 703

Query: 508 DELVIKE 514
           D +V +E
Sbjct: 704 DLMVTEE 710



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 229/511 (44%), Gaps = 56/511 (10%)

Query: 52  DARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF 111
           DA   S    H     L+    + + AL  FN +   K  NH+  +YA ++  L   + F
Sbjct: 60  DASISSTLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLF 119

Query: 112 EAVDAVLRQM----------------TYETCKFHEGIFLNLMKHFSNCSLHERVLE--MF 153
              +++L  +                +Y+ CKF   +  NL+    N  L  R+ +  + 
Sbjct: 120 WPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLL--VQNYVLSSRIFDAVVI 177

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQ-VDLAQNFLKYSNQHLRLKPNTC--------- 203
            K+       P ++ +S  LN L++  + + + + F +  N  +R  P TC         
Sbjct: 178 VKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCE 237

Query: 204 ------------------------IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
                                    +N+LI   CK   +  A EV + +    ++  +++
Sbjct: 238 LKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLA-ADVV 296

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY TL+ G C+  +F   I+L +EMV      P     + L+DG  + GK+D A +++  
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELG-FSPTEAAVSGLVDGLRKQGKIDDAYELVVK 355

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +   G  PN+F Y  L+N  CK G L +A+ ++  M    L+P+ I Y+ LI+ FCR+GR
Sbjct: 356 VGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGR 415

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +D A+     M + G    +  +N ++ G C+ G +  A  +  ++   G+     ++  
Sbjct: 416 LDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTS 475

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+  +++KA +L   M+  G  P+  T   L+  LC      +A+     LVE  
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
            KP   ++ +L+E  CR  K+  AFELL+++
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 168/305 (55%), Gaps = 4/305 (1%)

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           F++ +N+ +  +P    F  LI  +CK   ++ AF++  +M  + ++ PN+ T++ LI G
Sbjct: 458 FIEMTNKGV--EPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGIT-PNVYTFTALISG 514

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           LC   +  EA ELF+E+V + +I P  +TYNVLI+G+CR GK+D+A +++E M   G  P
Sbjct: 515 LCSTNKMAEASELFDELVER-KIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVP 573

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           + + Y  L++G C  G++ +AK+  D++    +K + + Y+ L++ +C+ GR+ EAL   
Sbjct: 574 DTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSAS 633

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM +RG   D+V   +++ G  ++   +    +L+ +   G+  +   Y  +++   ++
Sbjct: 634 CEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKE 693

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G  +KA E   LM+     P+  T   L+  LCKAG  + A +    +      P S ++
Sbjct: 694 GSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITY 753

Query: 488 ALLVE 492
              ++
Sbjct: 754 GCFLD 758



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 218/461 (47%), Gaps = 44/461 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G       Y ++++   ++    A +++  +MT +  +     F +L+  +      +
Sbjct: 428 QDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487

Query: 148 RVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           +  ++++K+  + IT   P++   +  ++ L  +N++  A        +  ++KP    +
Sbjct: 488 KAFKLYNKMIDNGIT---PNVYTFTALISGLCSTNKMAEASELFDELVER-KIKPTEVTY 543

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N+LI+ +C+ G ++ AFE+L++M +  +  P+  TY  LI GLC  GR  +A +  +++ 
Sbjct: 544 NVLIEGYCRDGKIDKAFELLEDMHQKGL-VPDTYTYRPLISGLCSTGRVSKAKDFIDDL- 601

Query: 266 SKDQILPDALTYNVLIDGFCRGGK--------------------------VDRAKK---- 295
            K  +  + + Y+ L+ G+C+ G+                          +D A K    
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR 661

Query: 296 -----IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
                +++ M + G  P+   YT++++ + KEG  ++A E +D M      P+ + YT L
Sbjct: 662 KTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTAL 721

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +N  C+AG +D A  L K M+      + +T+   L  L +EG ++EA+G L      G+
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG-LHHAMLKGL 780

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N  ++ I++   C+ G   +A ++L  M   G  P   T + L+   C++G    +  
Sbjct: 781 LANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVK 840

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
               ++  G +P+  ++ LL+   C   +L  AFEL D+++
Sbjct: 841 LWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDML 881



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 134/241 (55%), Gaps = 3/241 (1%)

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +LI    K+   ++ F++LK+M    +  P+ + Y+++ID   K G F++A E ++ MV+
Sbjct: 650 VLIDGALKQPDRKTFFDLLKDMHDQGLR-PDNVIYTSMIDTYSKEGSFKKAFECWDLMVT 708

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            ++  P+ +TY  L++G C+ G++DRA  + + M+     PN   Y   ++   KEG ++
Sbjct: 709 -EECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMK 767

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +   M   LL  +T+ +  +I  FC+ GR  EA ++L EM E G   D VT++ ++
Sbjct: 768 EAIGLHHAMLKGLL-ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLI 826

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
              CR G +  ++ + + +   G+  +  +Y +++   C  GEL+KA EL   ML RG +
Sbjct: 827 YEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGII 886

Query: 447 P 447
           P
Sbjct: 887 P 887



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 159/327 (48%), Gaps = 11/327 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
            QKG   +  TY  ++  L    +       +  +  +  K +E  +  L+  +      
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQ---E 623

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYSNQHLR-LKPNTC 203
            R++E       + +   ++  +  C  +LI+    Q D    F    + H + L+P+  
Sbjct: 624 GRLMEALSASCEMIQRGINMDLV--CHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV 681

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           I+  +I  + K G+ + AFE   ++  ++  +PN++TY+ L++GLCK G    A  LF+ 
Sbjct: 682 IYTSMIDTYSKEGSFKKAFECW-DLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKR 740

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M + + + P+++TY   +D   + G +  A  +   M   G   N   +  ++ GFCK G
Sbjct: 741 MQAAN-VPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLG 798

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +  EA +V  EM    + PD + Y+TLI  +CR+G V  +++L   M  RG + D+V +N
Sbjct: 799 RFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYN 858

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGI 410
           +++ G C  G++++A  + + +   GI
Sbjct: 859 LLIYGCCVNGELDKAFELRDDMLRRGI 885



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 3/179 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  L+   CK G ++ A  + K M+ + +  PN ITY   +D L K G  +EAI 
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVP-PNSITYGCFLDNLTKEGNMKEAIG 771

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M+    +L + +T+N++I GFC+ G+   A K++  M  NG  P+   Y+TL+  +
Sbjct: 772 LHHAMLKG--LLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEY 829

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           C+ G +  + +++D M N  L+PD + Y  LI   C  G +D+A EL  +M  RG   D
Sbjct: 830 CRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 214/445 (48%), Gaps = 9/445 (2%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           + A  I+  +S + G   N  T   +++ L +  K E V   L ++  +        +  
Sbjct: 207 ELAWRIYQEIS-RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT 265

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+  +S+  L E   E+ H + P     P +   +T +N L +  + + A+       + 
Sbjct: 266 LISAYSSQGLMEEAFELMHAM-PSKGFSPGVYTYNTVINGLCKHGKYERAKEVFA---EM 321

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           LR  L P++  +  L+   CK+G       +  +M+ S+   P+L+ +S+++    ++G 
Sbjct: 322 LRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMR-SRDVVPDLVCFSSMMSLFTRSGN 380

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+  F   V +  ++PD + Y +LI G+CR G +  A  +   M   GC  +V  Y 
Sbjct: 381 LDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYN 439

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T+++G CK   L EA ++F+EM    L PD+   T LI+  C+ G +  A+EL K+MKE+
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
             K D+VT+N +L G  + G I+ A  +   +    I     S+ I++N  C KG L +A
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEA 559

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             +   M+ +   P     N ++   C++G A D  I L  ++  GF P+  S+  L+  
Sbjct: 560 FRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG 619

Query: 494 ICRGRKLLFAFELLDELVIKESGTI 518
             +   +  AF L+ ++  K+ G +
Sbjct: 620 FVKEENMSKAFGLVKKMEEKQGGLV 644



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 210/458 (45%), Gaps = 73/458 (15%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++   IS    +   + A E+ + +   KGF+    TY T+++ L ++ K+E    V  
Sbjct: 261 VTYNTLISAYSSQGLMEEAFELMHAMP-SKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 319

Query: 120 QM----------TY-----ETCKFHEGI--------------------FLNLMKHFSNCS 144
           +M          TY     E CK  + +                    F ++M  F+   
Sbjct: 320 EMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSG 379

Query: 145 LHERVLEMFHK-----------IHPITREKPSLKA-ISTCLNLLIESNQVDLAQNFLKYS 192
             ++ L  F+            I+ I  +    K  IS  +NL  E  Q   A + + Y+
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYN 439

Query: 193 N---------------------QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     L P++    ILI  HCK G L++A E+ K+MK+ 
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           ++   +++TY+TL+DG  K G    A E++ +MVSK +ILP  +++++L++  C  G + 
Sbjct: 500 RIKL-DVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISFSILVNALCSKGHLS 557

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A ++ + M +    P V    +++ G+C+ G   + +   ++M +    PD I Y TLI
Sbjct: 558 EAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLI 617

Query: 352 NCFCRAGRVDEALELLKEMKER--GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
             F +   + +A  L+K+M+E+  G   D+ T+N IL G CRE +++EA  +L K+   G
Sbjct: 618 YGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERG 677

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           +  ++++Y  ++N    +  L +A      ML RGF P
Sbjct: 678 VNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 164/345 (47%), Gaps = 26/345 (7%)

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE-VLKEMKKSQMSYPNLI--- 239
           L  NF  + +  L L   + + +IL++     G L  A   VL+ +++S +S   ++   
Sbjct: 92  LGFNFPNFKHTSLSL---SAMIHILVRS----GRLSDAQSCVLRMIRRSGVSRVEIVNSL 144

Query: 240 --TYST----------LIDGLCKNGRFREAIELFEEMVSKDQILP-DALTYNVLIDGFCR 286
             TYS           LI    +  + REA E F  + SK   +  DA   N LI    R
Sbjct: 145 VSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDAC--NALIGSLVR 202

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G V+ A +I + +  +G   NV+    ++N  CK+GK+++      E++   + PD + 
Sbjct: 203 IGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVT 262

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y TLI+ +   G ++EA EL+  M  +G    + T+N ++ GLC+ GK E A  +  ++ 
Sbjct: 263 YNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 322

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+  +  +YR +L  +C+KG+  +   +   M  R  +P     + ++    ++G  +
Sbjct: 323 RSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 382

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            A +    + E G  P++  + +L++  CR   +  A  L +E++
Sbjct: 383 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEML 427



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 10/295 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH- 146
           Q+G   +  TY TIL  L + K     D +  +MT E   F +   L ++    +C L  
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT-ERGLFPDSYTLTILID-GHCKLGN 485

Query: 147 -ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            +  +E+F K+    R K  +   +T L+   +   +D A+           + P    F
Sbjct: 486 LQNAMELFKKMKE-KRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA-DMVSKEILPTPISF 543

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           +IL+   C +G L  AF V  EM    +  P ++  +++I G C++G   +     E+M+
Sbjct: 544 SILVNALCSKGHLSEAFRVWDEMISKSIK-PTVMICNSMIKGYCRSGNASDGEIFLEKMI 602

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM--KNNGCNPNVFNYTTLMNGFCKEG 323
           S +  +PD ++YN LI GF +   + +A  +++ M  K  G  P+VF Y ++++GFC+E 
Sbjct: 603 S-EGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +++EA+ V  +M    + PD   YT+LIN F     + EA     EM +RG   D
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 239/491 (48%), Gaps = 20/491 (4%)

Query: 28  SPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSE 87
           S L  +  +  K + PV    +C+   K    IS GA ++   C + P  A +IFN + +
Sbjct: 101 SSLHYLLLHPQKTNNPV----SCLHISKPLLDISIGAYVA---CGR-PHQAAQIFNRM-K 151

Query: 88  QKGFNHNNATYATILDKLARYKKFEAV---DAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           + G      T  T+L+ L R+    ++    AV         K +   F N++ H S   
Sbjct: 152 RLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSF-NILIHGS--C 208

Query: 145 LHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
           +  R  E    +  +      P     +T L+ L +  +++ A++ L    ++  L PN 
Sbjct: 209 MENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLL-LDMKNKGLFPNR 267

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             FNIL+   C+ G L+ A  V++ M ++ +  P+  TY+ +I G CK GR  EA+ L E
Sbjct: 268 TTFNILVVGCCRLGWLKEAANVIELMSQNSV-VPDAWTYNVMISGFCKQGRIAEAMRLRE 326

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM    ++ PD +TYN LI+G    G  +   K++E M+  G  PN   Y  ++  F K+
Sbjct: 327 EM-ENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKK 385

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK+ E  +   +M+     PD + Y TLI+  C+ G++DEA  L+ EM  +G K D VT 
Sbjct: 386 GKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTL 445

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N +L  LCRE K++EA  +L      G ++++ SY  ++    +  +  +A+ L   M  
Sbjct: 446 NTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKE 505

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +  +P   T N ++  LC+ G    A   L  L+E G  P+  ++  ++   C+  ++  
Sbjct: 506 KEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEK 565

Query: 503 AFELLDELVIK 513
           AF+  +++V K
Sbjct: 566 AFQFHNKMVEK 576



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 214/429 (49%), Gaps = 16/429 (3%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH---FSNCSLHERVL 150
           +N TY TILD L +  +      +L  M       ++G+F N          C     + 
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMK------NKGLFPNRTTFNILVVGCCRLGWLK 284

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNF-LKYSNQHLRLKPNTCIFNI 207
           E  + I  +++   S+   +   N++I     Q  +A+   L+   ++L+L P+   +N 
Sbjct: 285 EAANVIELMSQN--SVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNT 342

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI    + G+ E  F++++EM+   M  PN +TY+ ++    K G+  E  +   +M  +
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMK-PNSVTYNVMVKWFVKKGKMDEVDKTVRKM-EE 400

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              LPD +TYN LI   C+ GK+D A ++M+ M   G   +     T++   C+E KL E
Sbjct: 401 SGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDE 460

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++    +      D + Y TLI  + +  +  +AL L  EMKE+     I+T+N ++ 
Sbjct: 461 AHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIA 520

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ GK  +A+  L++L   G+  ++ +Y  +++  CQ+G++EKA +    M+ + F P
Sbjct: 521 GLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKP 580

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N LL  LCK GM E A       +  G   ++ S+  ++  +C+ ++   AF+LL
Sbjct: 581 DVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLL 640

Query: 508 DELVIKESG 516
           +E+  K+ G
Sbjct: 641 EEMEEKKLG 649



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 183/385 (47%), Gaps = 74/385 (19%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A N ++  +Q+  + P+   +N++I   CK+G +  A  + +EM+  ++S P+++TY+TL
Sbjct: 286 AANVIELMSQN-SVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS-PDVVTYNTL 343

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           I+G  ++G   E  +L EEM  +  + P+++TYNV++  F + GK+D   K +  M+ +G
Sbjct: 344 INGCFEHGSSEEGFKLIEEMEGRG-MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C P++  Y TL++  CK GK+ EA  + DEM    LK D +   T++   CR  ++DEA 
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAH 462

Query: 365 ELL-----------------------------------KEMKERGCKADIVTFNIILGGL 389
           +LL                                    EMKE+     I+T+N ++ GL
Sbjct: 463 DLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGL 522

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE-------------------- 429
           C+ GK  +A+  L++L   G+  ++ +Y  +++  CQ+G+                    
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582

Query: 430 ---------------LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
                          LEKA++L    + +G      + N +++ LCK     +A   L  
Sbjct: 583 VTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEE 642

Query: 475 LVEMGFKPESDSW-ALLVELICRGR 498
           + E    P+  ++ A+L  L   GR
Sbjct: 643 MEEKKLGPDCYTYNAILGGLTDAGR 667



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 147/280 (52%), Gaps = 2/280 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N LI  HCK G ++ AF ++ EM +  +   + +T +T++  LC+  +  EA +
Sbjct: 405 PDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDD-VTLNTMLRALCRERKLDEAHD 463

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L      +   + D ++Y  LI G+ +  K  +A ++ + MK     P++  Y +++ G 
Sbjct: 464 LLCSARRRGYFV-DEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGL 522

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ GK  +A +  DE+    L PD I Y T+I+ +C+ G+V++A +   +M E+  K D+
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV 582

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT N +L GLC+EG +E+AL +       G  ++  SY  ++   C++    +A +LL  
Sbjct: 583 VTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEE 642

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           M  +   P   T N +L  L  AG  +DA   +  + E G
Sbjct: 643 MEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 18/164 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+    N L+   CK G LE A ++      S+    + ++Y+T+I  LCK  RF EA
Sbjct: 578 FKPDVVTCNTLLCGLCKEGMLEKALKLFNTWI-SKGKDVDAVSYNTIILSLCKEKRFGEA 636

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L EEM  K ++ PD  TYN ++ G    G++  A++ +  +   G +          N
Sbjct: 637 FDLLEEMEEK-KLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSE---------N 686

Query: 318 GFCKEGKLQEAK--EVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
            F + GK Q+A+  E+  E       P+ I Y+  IN  C  GR
Sbjct: 687 QFLELGKRQDARTSEIPQEP-----HPNAIAYSNKINELCSQGR 725


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 227/488 (46%), Gaps = 58/488 (11%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TY 123
            P   L  F+  ++   +  ++ +Y+ +L  L   + F     VLRQ+           Y
Sbjct: 80  HPSACLSFFHLATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAY 139

Query: 124 ETCK----------FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
             C           F  G+F  LMK F+   + +  L +F ++  I R  P L++ S  L
Sbjct: 140 AVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGR-VPGLRSCSFLL 198

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
             L++  +  +A            + P+  + +I++  HC+ G ++ A EVL++M K  +
Sbjct: 199 GKLVQKGEGRVAVMVFD-QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGL 257

Query: 234 SYPNLITYSTLIDGL-----------------------------------CKNGRFREAI 258
             PN++TY+ L++G                                    CK G+  EA 
Sbjct: 258 E-PNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAE 316

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +L  E+   + ++ D   Y VL+DG+C+ G+++ A +I + M   G   N+    TL+ G
Sbjct: 317 KLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKG 376

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +CK G++ EA+ VF  M ++ LKPD   Y TL++ +CR G+V +A  L +EM   G    
Sbjct: 377 YCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPT 436

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VT+N ++ GL   G  ++AL +   +   G+  N+ S   +L+   + G+ ++A+ L +
Sbjct: 437 VVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWK 496

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +L RGF       N ++  LCK G   +A      + E+G  P+  ++  L +  C+  
Sbjct: 497 EILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNG 556

Query: 499 KLLFAFEL 506
            +  AF++
Sbjct: 557 NVQEAFQI 564



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 179/365 (49%), Gaps = 5/365 (1%)

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLL---IESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            E   ++  +  E+   + + TC  L+    +  ++D A+  L+   +   L  +  ++ 
Sbjct: 277 FEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYG 336

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +L+  +C+ G +E A  +  EM +  +   N++  +TLI G CK G+  EA  +F  MV 
Sbjct: 337 VLVDGYCQMGRMEDAVRIRDEMLRVGLKV-NMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            + + PD  +YN L+DG+CR GKV +A  + E M  +G  P V  Y T++ G    G   
Sbjct: 396 WN-LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYD 454

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A  ++  M    + P+ I   T+++CF + G  D A+ L KE+  RG     V FN ++
Sbjct: 455 DALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMI 514

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+ GK+ EA  + +++   G+  ++ +YR + +  C+ G +++A ++  +M  +   
Sbjct: 515 SGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMS 574

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
                 N L+  L K     D    L  +   G  P   ++  L+   C  +KL  AF L
Sbjct: 575 ASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHL 634

Query: 507 LDELV 511
             E++
Sbjct: 635 YFEMI 639



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 192/433 (44%), Gaps = 45/433 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+   + ++ G   N  TY  +++       FE V+ VLR M+      +      LM
Sbjct: 245 AMEVLEKMVKE-GLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLM 303

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHL 196
           + +      +   ++  ++     E   L        +L++   Q+   ++ ++  ++ L
Sbjct: 304 RGYCKKGKMDEAEKLLREVE----EDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEML 359

Query: 197 R--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           R  LK N  I N LIK +CK G +  A  V   M    +  P+  +Y+TL+DG C+ G+ 
Sbjct: 360 RVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLK-PDCYSYNTLLDGYCREGKV 418

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN------ 308
            +A  L EEM+  D I P  +TYN +I G    G  D A  +   M   G  PN      
Sbjct: 419 SKAFMLCEEMLG-DGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCT 477

Query: 309 -----------------------------VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
                                           + T+++G CK GKL EA  VFD MK   
Sbjct: 478 MLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELG 537

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L PD I Y TL + +C+ G V EA ++   M+ +   A I  +N ++ GL +  K+ +  
Sbjct: 538 LSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVT 597

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L ++   G+  N  +Y  +++  C + +L+KA  L   M+ RGF P+    ++++  L
Sbjct: 598 DLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSL 657

Query: 460 CKAGMAEDAAIAL 472
            +     +A + L
Sbjct: 658 YRDDRISEATVIL 670



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 159/331 (48%), Gaps = 37/331 (11%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T  FN +I   CK G L  A  V   MK+  +S P+ ITY TL DG CKNG  +EA ++
Sbjct: 506 STVAFNTMISGLCKMGKLMEAGAVFDRMKELGLS-PDEITYRTLSDGYCKNGNVQEAFQI 564

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            + ++ +  +      YN LIDG  +  K++    ++  M+  G +PNV  Y TL++G+C
Sbjct: 565 -KGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWC 623

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE-------R 373
            E KL +A  ++ EM      P+ +  + +++   R  R+ EA  +L +M +        
Sbjct: 624 DEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHN 683

Query: 374 GC---------------------KADI-------VTFNIILGGLCREGKIEEALGMLEKL 405
            C                     K+DI       + +NI + GLC+ GK++EA  +L  L
Sbjct: 684 KCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVL 743

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G   +  +Y  +++     G +++A +L   ML +G +P+    N L+  LCK G  
Sbjct: 744 MSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNI 803

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICR 496
           + A    + L + G  P + ++ +L+   CR
Sbjct: 804 DRAQRLFYKLYQKGLVPNAVTYNILIGCYCR 834



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 14/353 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  +   + T++  L +  K     AV  +M        E  +  L   +     +  
Sbjct: 501 RGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCK---NGN 557

Query: 149 VLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           V E F     + R+    S++  ++ ++ L +  +++   + L    Q   L PN   + 
Sbjct: 558 VQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLL-VEMQTRGLSPNVVTYG 616

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   C    L+ AF +  EM +   + PN++  S ++  L ++ R  EA  + ++M+ 
Sbjct: 617 TLISGWCDEQKLDKAFHLYFEMIERGFT-PNVVVCSKIVSSLYRDDRISEATVILDKMLD 675

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNGCNP--NVFNYTTLMNGFCKEG 323
            D +      +N   D   +      A+KI + + K++ CN   N   Y   ++G CK G
Sbjct: 676 FDILA----VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSG 731

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           KL EA+ V   + +    PD   Y TLI+    +G VDEA +L  EM E+G   +I  +N
Sbjct: 732 KLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYN 791

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++ GLC+ G I+ A  +  KL+  G+  N  +Y I++   C+ G+L+KA  L
Sbjct: 792 ALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRL 844



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 178/392 (45%), Gaps = 76/392 (19%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+   +N L+  +C+ G +  AF + +EM    ++ P ++TY+T+I GL   G + +A
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGIT-PTVVTYNTVIKGLVDVGSYDDA 456

Query: 258 IELFEEMVSKD-----------------------------QILPDALT-----YNVLIDG 283
           + L+  MV +                              +IL    T     +N +I G
Sbjct: 457 LHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISG 516

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA--------------- 328
            C+ GK+  A  + + MK  G +P+   Y TL +G+CK G +QEA               
Sbjct: 517 LCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSAS 576

Query: 329 --------------------KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                                ++  EM+   L P+ + Y TLI+ +C   ++D+A  L  
Sbjct: 577 IEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYF 636

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW-YDGIYL-NKASYRIVLNFSCQ 426
           EM ERG   ++V  + I+  L R+ +I EA  +L+K+  +D + + NK S ++V N    
Sbjct: 637 EMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTL 696

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           + + + A  L +  +C   L +    N  +  LCK+G  ++A   L  L+  GF P++ +
Sbjct: 697 EAQ-KIADSLDKSDICNS-LSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFT 754

Query: 487 WALLVELICRGRKLLFAFELLDELVIKESGTI 518
           +  L+        +  AF+L DE++  E G I
Sbjct: 755 YCTLIHACSVSGNVDEAFKLRDEML--EKGLI 784



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 4/166 (2%)

Query: 217 TLESAFEVLKEMKKSQM--SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           TLE A ++   + KS +  S  N I Y+  IDGLCK+G+  EA  +   ++S+   LPD 
Sbjct: 695 TLE-AQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRG-FLPDN 752

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            TY  LI      G VD A K+ + M   G  PN+  Y  L+NG CK G +  A+ +F +
Sbjct: 753 FTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYK 812

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +    L P+ + Y  LI C+CR G +D+A  L ++M E G    I+
Sbjct: 813 LYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 193/436 (44%), Gaps = 55/436 (12%)

Query: 123 YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
           + +  F + I L+L +     S H  +  +  K+   T   P  + +     LLI +   
Sbjct: 2   FRSSLFKKPILLSLTQR----SFHSSI-PLQWKLRQETTNLPHPELLDRITRLLILNRPQ 56

Query: 183 DLAQNFLKYSN-------QHLRLKPNTCI--FNILIKH-HCKRGTLESAFEVLKEMKKSQ 232
            L     KYS+       + LRL P+ C+  F++  ++ H +  +L  ++ +L  +    
Sbjct: 57  SLHNLTFKYSDHLTDSLLRRLRLHPSACLSFFHLATQNSHYRPHSL--SYSILLHILTHA 114

Query: 233 MSYPNLITY-STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
             +P   T    L+D  C N     A+      V K+      + +++L+  F   G   
Sbjct: 115 RLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSGV-FDMLMKAFAERGMTK 173

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A  + + M   G  P + + + L+    ++G+ + A  VFD++    + PD    + ++
Sbjct: 174 HALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVV 233

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFN---------------------------- 383
           N  C+ GRVD A+E+L++M + G + ++VT+N                            
Sbjct: 234 NAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVS 293

Query: 384 -------IILGGLCREGKIEEALGMLEKLWYDG-IYLNKASYRIVLNFSCQKGELEKAIE 435
                  +++ G C++GK++EA  +L ++  D  + +++  Y ++++  CQ G +E A+ 
Sbjct: 294 RNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVR 353

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +   ML  G   +    N L+   CK G   +A     G+V+   KP+  S+  L++  C
Sbjct: 354 IRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYC 413

Query: 496 RGRKLLFAFELLDELV 511
           R  K+  AF L +E++
Sbjct: 414 REGKVSKAFMLCEEML 429


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 249/538 (46%), Gaps = 75/538 (13%)

Query: 10  KCCRFSSFSTS------SSSLP---WISPL----EVIKANTPKADPP-----------VE 45
           KC   SS  TS      SSSLP   WI P     +++K+N      P             
Sbjct: 38  KCLPLSSSRTSVRWVFNSSSLPPPEWIEPFNDVSDLVKSNRNLQPSPWVSQILNLLDGSA 97

Query: 46  TSDTCVDARKRSRFISHGAA-ISLI----KCEKEPQCALEIFNTVSEQKGFNHNNATYAT 100
           + ++ +D   R   I      +S +    +  ++P  A   F    +QK + HN   Y +
Sbjct: 98  SMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVS 157

Query: 101 ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL----NLMKHFSNCSLHERVLEMFHKI 156
           ++D LA  K  + +    R +  E  KF   + +    +L+K F    + E +L ++ K+
Sbjct: 158 LVDVLALAKDVDRI----RFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKM 213

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                E P+L   +  +N L+ +  VD A+   +      R+KP+   +N +IK +CK G
Sbjct: 214 KENGIE-PTLYTYNFLMNGLVSAMFVDSAERVFEVMESG-RIKPDVVTYNTMIKGYCKAG 271

Query: 217 TLESAFEVLKEM-----KKSQMSYPNLI-----------------------------TYS 242
             + A E L+ M     +  +++Y  +I                              +S
Sbjct: 272 QTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFS 331

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            +I GLCK G+  E   +FE M+ K    P+   Y VLIDG+ + G V+ A +++  M +
Sbjct: 332 LVIGGLCKEGKLNEGYAVFENMIRKGS-KPNVAIYTVLIDGYAKTGSVEDAIRLLHRMID 390

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            G NP+V  Y+ ++NG CK G+++EA + F   +   L  +++ Y++LI+   +AGRVDE
Sbjct: 391 EGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDE 450

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVL 421
           A  L +EM E+GC  D   +N ++    + GK++EAL + +++   +G      +Y I++
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILI 510

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +   ++   E+A++L  +M+ +G  P  A    L   LC +G    A   L  L  MG
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMG 568



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN  I+ +LI  + K G++E A  +L  M     + P+++TYS +++GLCKNGR  EA+
Sbjct: 359 KPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN-PDVVTYSVVVNGLCKNGRVEEAM 417

Query: 259 E-----------------------------------LFEEMVSKDQILPDALTYNVLIDG 283
           +                                   LFEEM S+     D+  YN LID 
Sbjct: 418 DYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDA 476

Query: 284 FCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           F + GKVD A  + + M+   GC+  V+ YT L++G  KE + +EA +++D M +  + P
Sbjct: 477 FTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITP 536

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
                  L    C +G+V  A ++L E+   G   D    ++I   LC+ G+I+EA  + 
Sbjct: 537 TAACLRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLA 595

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + +   G  +      +++N   + G+ + A++L+   +  G+
Sbjct: 596 DGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 638


>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 229/468 (48%), Gaps = 24/468 (5%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    +  ++  + P  AL  F  V E KGF HN  +Y  +++ L R +   A    + 
Sbjct: 93  LSKTTVLQTLQLIRTPAKALHFFRWV-EAKGFTHNEQSYFLMIEILGRSRNLNAARNFVF 151

Query: 120 QMTYET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
            +  ++    K  +  F +L++ +    L +  +++F  +  I    PS+   ++ L+++
Sbjct: 152 SIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVS-PSVVTFNSLLSIV 210

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           ++  +  +A+           + P+T  FNILI+  C    ++  F   KEM + +   P
Sbjct: 211 LKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCD-P 269

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKK 295
           +++TY+TL+DGLC+ G+ + A  + + MV K   L P+ +TY  LI G+C    +  A  
Sbjct: 270 DVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALS 329

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYTTLIN 352
           ++  M + G  PN   Y TL+ G C+  KL + KE+ + M     F+  PDT    TLI 
Sbjct: 330 LLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFI--PDTCTLNTLIK 387

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C  G+++EA  + ++M E   + D  T+++++  LC+ G    A    ++L    I L
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447

Query: 413 NK-------ASYRIVLNFSCQKGELEKAIELLRLMLCRGFL--PHYATSNELLVRLCKAG 463
           +        A+Y  +  + C  G+ +KA  + R ++ RG    P Y T   L++  C+ G
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKT---LILGHCREG 504

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             E     L  ++   F P+++++ L+++ + +    + A + L++++
Sbjct: 505 TPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 552



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 143/278 (51%), Gaps = 5/278 (1%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EF 299
           +++LI      G F+E+I++F+ M  +  + P  +T+N L+    + G+   AK++  E 
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTM-KEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEM 226

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +   G  P+ + +  L+ GFC    + E    F EM  F   PD + Y TL++  CRAG+
Sbjct: 227 LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286

Query: 360 VDEALELLKEM--KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           V  A  ++K M  K      ++VT+  ++ G C +  + EAL +L ++   G+  NK +Y
Sbjct: 287 VKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRG-FLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
             ++   C+  +L+K  E+L  M+  G F+P   T N L+   C  G  E+A      + 
Sbjct: 347 NTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMS 406

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           E+  +P+S ++++LV  +C+      A E  DEL  KE
Sbjct: 407 ELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKE 444



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 168/386 (43%), Gaps = 46/386 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P +   +T ++ L  + +V +A N +K    +   L PN   +  LI+ +C +  +  A 
Sbjct: 269 PDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEAL 328

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L EM    +  PN ITY+TLI GLC+  +  +  E+ E MV     +PD  T N LI 
Sbjct: 329 SLLAEMVSRGLK-PNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 387

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLL 340
             C  GK++ A  + E M      P+   Y+ L+   C+ G  + A+E FDE+  K  LL
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447

Query: 341 -----KP----------------------------------DTIGYTTLINCFCRAGRVD 361
                KP                                  D   Y TLI   CR G  +
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPE 507

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
              +LL  M  R    D  T+ +++ GL ++G    A   LEK+         A +  +L
Sbjct: 508 AGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSIL 567

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
               +KG   ++  L++LML R    +   S   +  L K+G+ + A + +  L E G+ 
Sbjct: 568 AALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYL 627

Query: 482 PESDSWALLVELICRGRKLLFAFELL 507
            + +    LV  +C+ RKLL A ++L
Sbjct: 628 VKMEE---LVSFLCQSRKLLEAQKML 650



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 97/434 (22%), Positives = 171/434 (39%), Gaps = 68/434 (15%)

Query: 39  KADPPVETSDTCVDA--RKRSRFISHGAAISLIKCEKEP-------------------QC 77
           K DP V T +T VD   R     I+H     ++K  K P                   Q 
Sbjct: 266 KCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVK--KSPNLSPNVVTYTTLIRGYCMKQD 323

Query: 78  ALEIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
             E  + ++E   +G   N  TY T++  L   +K + +  +L  M  +     +   LN
Sbjct: 324 MAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLN 383

Query: 136 -LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSN 193
            L+K        E    +F K+  + R +P     S  +  L +      A+ F  + + 
Sbjct: 384 TLIKAHCTMGKLEEAFSVFEKMSEL-RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAE 442

Query: 194 QHLRL-----KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           + + L     KP    +N + ++ C  G  + A  V +++ K     P   +Y TLI G 
Sbjct: 443 KEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP--SYKTLILGH 500

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C+ G      +L   M+ +D  +PDA TY ++IDG  + G    A K +E M  +   P 
Sbjct: 501 CREGTPEAGFDLLVLMLRRD-FVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPT 559

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEM------KNFLLKPDTI----------------- 345
              + +++    ++G   E+  +   M      +N  L   T+                 
Sbjct: 560 TAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIG 619

Query: 346 -----GYTT----LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
                GY      L++  C++ ++ EA ++L    E+    DI   + ++ GLC+  K+ 
Sbjct: 620 LLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVS 679

Query: 397 EALGMLEKLWYDGI 410
           EA  +  +L   G+
Sbjct: 680 EAFALYYELVEKGM 693


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 219/468 (46%), Gaps = 84/468 (17%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+ HN  TY  +L +L R  + +   AV ++M  ++C+                      
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQ---------------------- 39

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
                         P     +  L  L  SNQ++ A+  L    + +   P+  I+N LI
Sbjct: 40  --------------PDAFTFAILLRGLCRSNQLEKARKLLGRMKE-MGCVPDDAIYNALI 84

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
             + K      AF+ L EM K+    P ++TY+ ++DGLCK  R R+A++L +EM  K  
Sbjct: 85  SGYSKAKDFGQAFKFLAEMVKNH-CLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDK-G 142

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-----------------CN------ 306
             P+  TYNV+++G C   K+D AKK++E M   G                 C+      
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 202

Query: 307 ---------PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
                    P+V +YTT++NG CK G L  A  + D M N    PD + Y++LI+ FC+ 
Sbjct: 203 KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G V+ A+ LL  M + GC+ ++V +N +LG L R G I +A  ML ++   G   +  SY
Sbjct: 263 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR----------LCKAGMAED 467
              ++  C+   ++KA  +   M+ RG  P+ ++ + L+V           LCK G   D
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRF-D 381

Query: 468 AAIALFGLV--EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            A ALF  V  E   +P+   + ++++  C+ R++  A ++  +++ K
Sbjct: 382 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK 429



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 204/414 (49%), Gaps = 19/414 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG + N  TY  I++ L   +K +    +L +M           + + +K    C   +
Sbjct: 140 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 199

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              +   ++ P+T   P + + +T +N L +S  +D A   L + +      P+   ++ 
Sbjct: 200 EARKFLARM-PVT---PDVVSYTTVINGLCKSGDLDSASRMLDHMSNR-GCTPDVVTYSS 254

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   CK G +E A  +L  M K     PN++ Y++L+  L + G   +A ++  EM  +
Sbjct: 255 LIDGFCKGGEVERAMGLLDSMLKLGCR-PNMVAYNSLLGALHRLGHIGKAEDMLVEM-ER 312

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN----------VFNYTTLMN 317
               PD ++YN  IDG C+  +V +AK + + M   GC PN          +  YT L++
Sbjct: 313 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372

Query: 318 GFCKEGKLQEAKEVFDE-MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           G CK G+  EA  +F + +   + +PD   Y  +++  C+  ++D+AL++ K+M E+ C 
Sbjct: 373 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC- 431

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++VT+NI++ GLC + ++ +A  ML  +  +G   +  +Y  +++  C+ G+   A+EL
Sbjct: 432 CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALEL 491

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
               +  G +P   T + L+  L    MAE+A +    LVE  + P+  +  LL
Sbjct: 492 FEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 216/457 (47%), Gaps = 66/457 (14%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   ++A Y  ++   ++ K F      L +M    C      + N++         
Sbjct: 69  KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128

Query: 147 ERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---P 200
              +++  ++    R+K   P++   +  +  L E  ++D A+  L    + + ++   P
Sbjct: 129 RDAVKLLDEM----RDKGCSPNIYTYNVIVEGLCEERKLDEAKKML----EEMAVRGYFP 180

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +N  IK  CK   ++ A + L  M  +    P++++Y+T+I+GLCK+G    A  +
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPVT----PDVVSYTTVINGLCKSGDLDSASRM 236

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            + M S     PD +TY+ LIDGFC+GG+V+RA  +++ M   GC PN+  Y +L+    
Sbjct: 237 LDHM-SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK---- 376
           + G + +A+++  EM+     PD + Y   I+  C+A RV +A  +   M ERGC     
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355

Query: 377 ------ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-YLNKASYRIVLNFSCQKGE 429
                  DI+ + ++L GLC+ G+ +EA  +  K+  + I   +   Y ++L+  C++ +
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 430 LEKAIELLRLMLCR----------------------------------GFLPHYATSNEL 455
           ++KA+++ + ML +                                  GF+P + T   L
Sbjct: 416 IDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475

Query: 456 LVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLV 491
           +  +CK G +  AA+ LF   V+ G  P+  +++ L+
Sbjct: 476 VDAMCKCGKSA-AALELFEEAVKGGCVPDVVTYSALI 511


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 215/423 (50%), Gaps = 32/423 (7%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFSNCSLHERVL 150
           +++  +L  LA+ K +  V ++  QM     + + C  +  I LN +     C+++ R+ 
Sbjct: 70  SSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLN--ILLNCL-----CNVN-RLR 121

Query: 151 EMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNI 207
           E F     I R    P++   +T +  L   +++  A   FL+   Q L   P+   +  
Sbjct: 122 EGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM--QKLGCTPDVVTYGT 179

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSY-----PNLITYSTLIDGLCKNGRFREAIELFE 262
           LIK  C  G +  A ++ +EM      Y     PN+ITY+ ++DGLCK GR  EA +LFE
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 263 EMVSK--------DQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           EM ++        DQ L PD +T+NVLID  C+ GKV  AKK++  M  +G  P++  Y 
Sbjct: 240 EMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 299

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +L+ GFC  G L  A+E+F  M +   +PD I Y  LIN + +  +V+EA++L  EM   
Sbjct: 300 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 359

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G + +++T++ +L G+   GK+++A  +   +   GI  N  +Y I L+  C+   L +A
Sbjct: 360 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 419

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           ++L   +    F       N L+  LCKAG  E A      L   G +P   ++ +++  
Sbjct: 420 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 479

Query: 494 ICR 496
            CR
Sbjct: 480 FCR 482



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 184/368 (50%), Gaps = 45/368 (12%)

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS---------YPNLITYS 242
           S   +  KPN   +NI++   CK G  + A ++ +EMK   M           P+++T++
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFN 264

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            LID LCK G+  EA +L   M+ +  I+PD +TYN LI+GFC  G ++ A+++   M +
Sbjct: 265 VLIDTLCKEGKVIEAKKLLGVMI-ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 323

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            GC P+V +Y  L+NG+ K  K++EA ++++EM     +P+ I Y +L+     AG+VD+
Sbjct: 324 KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDD 383

Query: 363 ALELLKEMKERG---------------CKAD--------------------IVTFNIILG 387
           A +L   MK  G               CK D                    I   N ++ 
Sbjct: 384 AKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLID 443

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ GK+E A  + EKL  +G   N  +Y I+++  C++G+++KA  L++ M   G  P
Sbjct: 444 GLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTP 503

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N L+    ++   E+    L  + +    P++ + +++V+++ +  K      LL
Sbjct: 504 DIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563

Query: 508 DELVIKES 515
               I++ 
Sbjct: 564 PRFPIQKG 571



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 119/276 (43%), Gaps = 17/276 (6%)

Query: 249 CKNGRFREAIEL-FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           CK G       L F  ++ +    P   ++N L+ G  +     +   +   M+ +G + 
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +      L+N  C   +L+E    F  +      P+ + Y TLI   C   R+ EA  L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD------GIYLNKASYRIVL 421
             M++ GC  D+VT+  ++ GLC  G I  AL + +++  D          N  +Y I++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPH----------YATSNELLVRLCKAGMAEDAAIA 471
           +  C+ G  ++A +L   M  +G +P+            T N L+  LCK G   +A   
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           L  ++E G  P+  ++  L+E  C    L  A EL 
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF 318



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 2/159 (1%)

Query: 355 CRAGRVD--EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
           C+ G V    AL     M        + +FN +L GL +     +   +  ++   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           ++ +  I+LN  C    L +       +L RG+ P+  T N L+  LC      +A    
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             + ++G  P+  ++  L++ +C    +  A +L  E++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML 201


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 190/360 (52%), Gaps = 12/360 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--HLRLKPNTCIFNILIKHHCKRGTLES 220
           KP +   +T ++ L ++  VD   N L   NQ  +  ++P+  ++  L+   C  G    
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVD---NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRD 229

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  +L+ M K ++  P++IT++ LID   K G+  +A EL+ EM+    I P+  TY  L
Sbjct: 230 ADLLLRGMMKRKIK-PDVITFNALIDAFVKEGKLLDAKELYNEMIQM-SIAPNIFTYTSL 287

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I+G C  G++D A+++   M+  GC P+V  YT+L+NGFCK  K+++A ++F EM    L
Sbjct: 288 INGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGL 347

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
             +TI YTTLI  F   G+ + A E+   M  RG   +I T+N++L  LC  GK+ +AL 
Sbjct: 348 TGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALM 407

Query: 401 MLEKLW---YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           + E +     DG+  N  +Y ++L+  C  G+LEKA+ +   M  R       T   ++ 
Sbjct: 408 IFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQ 467

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
            +CKAG  +DA      L   G KP   ++  ++  + R   +L A  L  ++  KE G 
Sbjct: 468 GMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKM--KEDGV 525



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 204/412 (49%), Gaps = 7/412 (1%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C+    C    F     + GF  +  T+ ++++      + E   +++ QM     K   
Sbjct: 117 CQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDV 176

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
            I+  ++         +  L +F+++      +P +   ++ +N L  S +   A   L+
Sbjct: 177 VIYTTIIDSLCKNGHVDNALSLFNQMENYGI-RPDVVMYTSLVNGLCNSGRWRDADLLLR 235

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
              +  ++KP+   FN LI    K G L  A E+  EM +  ++ PN+ TY++LI+GLC 
Sbjct: 236 GMMKR-KIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA-PNIFTYTSLINGLCM 293

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            GR  EA ++F  M +K    PD + Y  LI+GFC+  KV+ A KI   M   G   N  
Sbjct: 294 EGRLDEARQMFYLMETKG-CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            YTTL+ GF   GK   A+EVF  M +  + P+   Y  L++C C  G+V++AL + ++M
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 371 KER---GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           ++R   G   +I T+N++L GLC  GK+E+AL +   +    + +   +Y I++   C+ 
Sbjct: 413 QKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKA 472

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           G+++ A+ L   +  +G  P+  T   ++  L + G+  +A +    + E G
Sbjct: 473 GKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 178/356 (50%), Gaps = 5/356 (1%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  PS+   +  LN++ +  + D+  N  K+  Q + +  +    N+L+   C+     
Sbjct: 65  SRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHL-QIMGVSNDLYTCNLLMNCFCQSSQPC 123

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A   L ++ K     P++ T+++LI+G C   R  EA+ +  +MV    I PD + Y  
Sbjct: 124 LASSFLGKLMKLGFE-PDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG-IKPDVVIYTT 181

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +ID  C+ G VD A  +   M+N G  P+V  YT+L+NG C  G+ ++A  +   M    
Sbjct: 182 IIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRK 241

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           +KPD I +  LI+ F + G++ +A EL  EM +     +I T+  ++ GLC EG+++EA 
Sbjct: 242 IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEAR 301

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            M   +   G + +  +Y  ++N  C+  ++E A+++   M  +G   +  T   L+   
Sbjct: 302 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGF 361

Query: 460 CKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
              G   + A  +FG +V  G  P   ++ +L+  +C   K+  A  + +++  +E
Sbjct: 362 GLVG-KPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKRE 416



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 169/336 (50%), Gaps = 8/336 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +FN + E  G   +   Y ++++ L    ++   D +LR M     K     F  L+
Sbjct: 195 ALSLFNQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F          E+++++  ++   P++   ++ +N L    ++D A+    Y  +   
Sbjct: 254 DAFVKEGKLLDAKELYNEMIQMSIA-PNIFTYTSLINGLCMEGRLDEARQMF-YLMETKG 311

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+   +  LI   CK   +E A ++  EM +  ++  N ITY+TLI G    G+   A
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT-GNTITYTTLIQGFGLVGKPNVA 370

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN---NGCNPNVFNYTT 314
            E+F  MVS+  + P+  TYNVL+   C  GKV++A  I E M+    +G  PN+  Y  
Sbjct: 371 QEVFGHMVSRG-VPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNV 429

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G C  GKL++A  VF +M+   +    I YT +I   C+AG+V +AL L   +  +G
Sbjct: 430 LLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKG 489

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            K ++VT+  ++ GL REG + EA  +  K+  DG+
Sbjct: 490 VKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 35/236 (14%)

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI------------------- 351
           NY  ++       +  EA ++F  M      P  I +T L+                   
Sbjct: 38  NYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHL 97

Query: 352 ----------------NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                           NCFC++ +   A   L ++ + G + DI TF  ++ G C   +I
Sbjct: 98  QIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRI 157

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           EEA+ M+ ++   GI  +   Y  +++  C+ G ++ A+ L   M   G  P       L
Sbjct: 158 EEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSL 217

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LC +G   DA + L G+++   KP+  ++  L++   +  KLL A EL +E++
Sbjct: 218 VNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMI 273


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 239/487 (49%), Gaps = 38/487 (7%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           I   A +  ++ E     AL  F +++    F H   T+  ++ KLA   + ++V  +L+
Sbjct: 40  IKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQ 99

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           QM  +     E +F++++  +    L ER +EMF++I     + PS+K  +  L+ L+  
Sbjct: 100 QMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCD-PSVKIYNHVLDTLLGE 158

Query: 180 NQVDLAQNFLKYSN-QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-----SQM 233
           N++ +   ++ Y + +    +PN   +N+L+K  CK   ++ A ++L EM       + +
Sbjct: 159 NRIQMI--YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAV 216

Query: 234 SYPNLIT------------------------YSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
           SY  +I+                        Y+ LI+GLCK   ++  +EL  EMV K  
Sbjct: 217 SYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKG- 275

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ ++Y+ LI+     G+++ A  ++  M   GC+PN+   ++L+ G    G   +A 
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDAL 335

Query: 330 EVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           +++++M + F L+P+ + Y TL+  FC  G +D+A+ +   M+E GC  +I T+  ++ G
Sbjct: 336 DMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLING 395

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
             + G +E A+ +  K+   G   N   Y  ++   C+  + ++A  L+ +M      P 
Sbjct: 396 FTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPS 455

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFK--PESDSWALLVELICRGRKLLFAFEL 506
             T N  +  LC AG   D A  +F  +E  ++  P   ++  L++ + +  ++  A+ L
Sbjct: 456 VPTFNAFIKGLCDAGRL-DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGL 514

Query: 507 LDELVIK 513
             E+ ++
Sbjct: 515 TREIFMR 521



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 214/449 (47%), Gaps = 48/449 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ GF  N  TY  +L  L +  K +    +L +M+ + C  +   +  ++       + 
Sbjct: 172 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMV 231

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +   ++  +  P+     +L  I+           V+L    ++       + PN   ++
Sbjct: 232 KEGRQLAERFEPVVSVYNAL--INGLCKERDYKGGVELMSEMVEKG-----ISPNVISYS 284

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI      G +E AF +L +M K +  +PN+ T S+L+ G    G   +A++++ +M+ 
Sbjct: 285 TLINELSNSGQIELAFSLLAQMLK-RGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIR 343

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              + P+ + YN L+ GFC  G +D+A  +   M+  GC+PN+  Y +L+NGF K G L+
Sbjct: 344 GFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLE 403

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCR------------------------------ 356
            A  ++++M      P+ + YT+++   CR                              
Sbjct: 404 GAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 463

Query: 357 -----AGRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
                AGR+D A ++ ++M+++  C  +IVT+N +L GL +  +IEEA G+  +++  G+
Sbjct: 464 KGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 523

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             + ++Y  +L+ SC  G    A++L+  M+  G  P   T N +++  CK G AE  A+
Sbjct: 524 EWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAER-AV 582

Query: 471 ALFGLVEMG---FKPESDSWALLVELICR 496
            +  LV  G   ++P+  S+  ++  +CR
Sbjct: 583 QMLDLVSCGRRKWRPDVISYTNVIWGLCR 611



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 190/402 (47%), Gaps = 42/402 (10%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E++ +  +E+ + + E KG + N  +Y+T++++L+   + E   ++L QM    C     
Sbjct: 258 ERDYKGGVELMSEMVE-KGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGC----- 311

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
                                    HP      SL  +  C       + +D+    ++ 
Sbjct: 312 -------------------------HPNIHTLSSL--VKGCFVRGTTFDALDMWNQMIR- 343

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                 L+PN   +N L++  C  G ++ A  V   M++   S PN+ TY +LI+G  K 
Sbjct: 344 ---GFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCS-PNIRTYGSLINGFTKR 399

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G    A+ ++ +M++     P+ + Y  +++  CR  K   A+ ++E M    C P+V  
Sbjct: 400 GSLEGAVYIWNKMLTSG-CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 458

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +   + G C  G+L  A++VF +M + +   P+ + Y  L++   +A R++EA  L +E+
Sbjct: 459 FNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 518

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             RG +    T+N +L G C  G    AL ++ K+  +G   ++ +  +++   C++G+ 
Sbjct: 519 FMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKA 578

Query: 431 EKAIELLRLMLC--RGFLPHYATSNELLVRLCKAGMAEDAAI 470
           E+A+++L L+ C  R + P   +   ++  LC++   ED  I
Sbjct: 579 ERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 620



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 98/214 (45%), Gaps = 36/214 (16%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N   Y ++++ L R+ KF+  ++++  M+ E C      F   +K   +    +   ++F
Sbjct: 420 NVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 479

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF--------LKYSNQ----------- 194
            ++    R  P++   +  L+ L ++N+++ A           +++S             
Sbjct: 480 RQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCN 539

Query: 195 ------HLRL---------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNL 238
                  L+L          P+    N++I  +CK+G  E A ++L  +   +  + P++
Sbjct: 540 AGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDV 599

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           I+Y+ +I GLC++    + + LFE M+S ++I+P
Sbjct: 600 ISYTNVIWGLCRSNCREDGVILFERMIS-ERIIP 632


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 173/318 (54%), Gaps = 9/318 (2%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N+LI   C +G +  A +VL  +  S    P+ +TY+ ++  LC + R+ EA 
Sbjct: 227 EPDIVTYNVLINAMCSQGDVGEALKVLNSLP-SYGCKPDAVTYTPVLKSLCSSERWEEAD 285

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +L  +M S D   PD +T+N +I   C+ G V RA K++  M  +GC P++  Y+++M+G
Sbjct: 286 KLLTKMFSND-CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDG 344

Query: 319 FCKEGKLQEA----KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            CKE ++ EA    KE+  EM +    PD + + T+I   C+ G  D A++++ EM E G
Sbjct: 345 LCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHG 404

Query: 375 CKADIVTFNIILGG-LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           C  DI T+N I+ G LC+  K EEAL +L  +  +G+  +  +Y+ +     ++ E+E+A
Sbjct: 405 CIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERA 464

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVE 492
           I + R +   G  P     N +L+ LCK     D AI  F  +V  G  P+  ++ +LVE
Sbjct: 465 IGMFRRVQAMGLSPDKMLYNAILLGLCKK-WRTDLAIDFFAYMVSNGCMPDESTYIILVE 523

Query: 493 LICRGRKLLFAFELLDEL 510
            I     L  A ELL  L
Sbjct: 524 GIAYEGFLEEAKELLGNL 541



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 183/352 (51%), Gaps = 22/352 (6%)

Query: 147 ERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           ERV+E            PS   I+  T +N    +  +D A+  +      +   P+T  
Sbjct: 116 ERVVEALG---------PSATIITYNTMVNGYCRAGNIDAARRMI----DSVPFAPDTFT 162

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI+  C RG +  A  V  +M     S P+++TYS L+D  CK   +++A+ L +EM
Sbjct: 163 YNPLIRALCVRGCVLDALAVFDDMLHRGCS-PSVVTYSILLDATCKESGYKQAVVLLDEM 221

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            SK    PD +TYNVLI+  C  G V  A K++  + + GC P+   YT ++   C   +
Sbjct: 222 RSK-GCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSER 280

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            +EA ++  +M +    PD + +  +I   C+ G V  A ++L +M E GC  DI+T++ 
Sbjct: 281 WEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSS 340

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLN----KASYRIVLNFSCQKGELEKAIELLRLM 440
           I+ GLC+E +++EA+ +L++L  + +  N    + ++  ++   CQKG  ++AI+++  M
Sbjct: 341 IMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEM 400

Query: 441 LCRGFLPHYATSNELLVR-LCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
              G +P   T N ++   LCK+   E+A   L  +V  G  P++ ++  L 
Sbjct: 401 SEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLA 452



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 179/375 (47%), Gaps = 22/375 (5%)

Query: 154 HKIHPITREKPSLKAISTC-----LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           H     TR  P   A S       L  L++  ++D A   + +S       P     NIL
Sbjct: 44  HGTAKWTRTPPKPPARSGGGANRRLRGLVQRGELDGALRLV-HSISGSGKDPAVIPCNIL 102

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           IK  C  G +  A  V++ +  S      +ITY+T+++G C+ G     I+    M+   
Sbjct: 103 IKKLCADGRVADAERVVEALGPSA----TIITYNTMVNGYCRAGN----IDAARRMIDSV 154

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              PD  TYN LI   C  G V  A  + + M + GC+P+V  Y+ L++  CKE   ++A
Sbjct: 155 PFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQA 214

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             + DEM++   +PD + Y  LIN  C  G V EAL++L  +   GCK D VT+  +L  
Sbjct: 215 VVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKS 274

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC   + EEA  +L K++ +    ++ ++  V+   CQKG + +A ++L  M   G  P 
Sbjct: 275 LCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPD 334

Query: 449 YATSNELLVRLCKAGMAEDAAIALFG--LVEMGFK---PESDSWALLVELICRGRKLLFA 503
             T + ++  LCK     D AI L    L EM  K   P+  ++  ++  +C+      A
Sbjct: 335 IITYSSIMDGLCKERRV-DEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRA 393

Query: 504 FELLDELVIKESGTI 518
            +++DE+   E G I
Sbjct: 394 IKVVDEM--SEHGCI 406



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 191/375 (50%), Gaps = 20/375 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFL 134
           AL +F+ +   +G + +  TY+ +LD   +   ++    +L +M  + C+       + +
Sbjct: 179 ALAVFDDML-HRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLI 237

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YS 192
           N M    +     +VL       P    KP     +  L  L  S + + A   L   +S
Sbjct: 238 NAMCSQGDVGEALKVLNSL----PSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFS 293

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           N      P+   FN +I   C++G +  A +VL +M +   + P++ITYS+++DGLCK  
Sbjct: 294 ND---CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCT-PDIITYSSIMDGLCKER 349

Query: 253 RFREAI----ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           R  EAI    EL  EMVSK+ I PD +T+N +I   C+ G  DRA K+++ M  +GC P+
Sbjct: 350 RVDEAIKLLKELLAEMVSKNCI-PDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPD 408

Query: 309 VFNYTTLMNGF-CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +  Y  +++GF CK  K +EA ++ + M +  L PDT  Y +L     R   ++ A+ + 
Sbjct: 409 ITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMF 468

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           + ++  G   D + +N IL GLC++ + + A+     +  +G   ++++Y I++     +
Sbjct: 469 RRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYE 528

Query: 428 GELEKAIELLRLMLC 442
           G LE+A ELL  + C
Sbjct: 529 GFLEEAKELLGNLSC 543


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 219/457 (47%), Gaps = 42/457 (9%)

Query: 72  EKEPQCALEIFNTVSEQKGFN--HNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           E   + ALE+   ++   G +   N  TY T++D L + + F+  + V +QM     K +
Sbjct: 182 ENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPN 241

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
              +  L+  + +    + V++M  K+      KP      + LN L   +++    +FL
Sbjct: 242 NDTYNCLIHGYLSIGKWKEVVQMLEKMSA-RGLKPDCYTYGSLLNYLCALSEM---HSFL 297

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
               ++  L P+  IFNI    + K G ++ A ++  +M++  +S PN++ Y  LID LC
Sbjct: 298 DLMVEN-GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS-PNVVNYGALIDALC 355

Query: 250 KNGRFREAIELFEEMVSK---------------------------------DQ-ILPDAL 275
           K GR  +A   F +M+++                                 DQ I P+A+
Sbjct: 356 KLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAV 415

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
            +N LI   C  G+V   +++++ M++ G  P+ F+YT L++G+C  G+  EA++VFD M
Sbjct: 416 FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGM 475

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
            +  L P  + Y TL++ +C A R+D+A  L +EM  +G    +VT+N IL GL +  + 
Sbjct: 476 VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRF 535

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            EA  +   +   G   +  +Y I+LN  C+   +++A ++ + +  +G   +  T   +
Sbjct: 536 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 595

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           +  L K G  EDA      +   G  P   ++ L+ E
Sbjct: 596 IGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAE 632



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 188/416 (45%), Gaps = 40/416 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A++IFN +  Q G + N   Y  ++D L +  + +  +    QM  E    +  +F +L+
Sbjct: 328 AMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    ER  E+ +++                           L Q           
Sbjct: 387 YGLCTVDKWERAEELVYEM---------------------------LDQG---------- 409

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   FN LI + C  G +     ++  M+   +  P+  +Y+ LI G C  GR  EA
Sbjct: 410 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR-PDAFSYTPLISGYCLAGRTDEA 468

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F+ MVS   + P  +TYN L+ G+C   ++D A  +   M   G  P V  Y T+++
Sbjct: 469 EKVFDGMVSIG-LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILH 527

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  +  +  EAKE++  M N   K D   Y  ++N  C++  VDEA ++ + +  +G + 
Sbjct: 528 GLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 587

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I+TF I++G L + G+ E+A+ +   +  +G+  N  +YR+V     ++G LE+   L 
Sbjct: 588 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLF 647

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             M   G  P+    N L+ RL   G    A   L  L E  F  E+ + +LL+ +
Sbjct: 648 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISI 703



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 161/319 (50%), Gaps = 7/319 (2%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +++ PNTC ++ILI   C+ G L+ +F     + K+     N I  + L+ GLC   R  
Sbjct: 92  IKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRV-NDIVINQLLKGLCDGKRVG 150

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNY 312
           EA+++  + + +    PD ++Y++L+ GFC   + + A +++  M N+    C PNV  Y
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TT+++G CK      A+ VF +M +  +KP+   Y  LI+ +   G+  E +++L++M  
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           RG K D  T+  +L  LC    + E    L+ +  +G+  +   + I  +   + G ++K
Sbjct: 271 RGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 327

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+++   M   G  P+      L+  LCK G  +DA +    ++  G  P    +  LV 
Sbjct: 328 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 387

Query: 493 LICRGRKLLFAFELLDELV 511
            +C   K   A EL+ E++
Sbjct: 388 GLCTVDKWERAEELVYEML 406



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 9/233 (3%)

Query: 257 AIELFEEMVSK--DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            + LF  MV +   ++ P+  TY++LI   CR G++  +      +   G   N      
Sbjct: 79  VVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQ 138

Query: 315 LMNGFCKEGKLQEAKEV-FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE- 372
           L+ G C   ++ EA +V    M      PDT+ Y+ L+  FC   R +EALELL+ M   
Sbjct: 139 LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198

Query: 373 --RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             R C  ++VT+  ++ GLC+    + A G+ +++  +G+  N  +Y  +++     G+ 
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKW 258

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           ++ +++L  M  RG  P   T   LL  LC   ++E  +  L  +VE G  P+
Sbjct: 259 KEVVQMLEKMSARGLKPDCYTYGSLLNYLC--ALSEMHSF-LDLMVENGLSPD 308



 Score = 38.9 bits (89), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 15/163 (9%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE-----------ALGMLEKLWYD 408
           +D+AL+L  E+      A +V FN IL  + R  +               + +  ++  +
Sbjct: 30  LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRE 89

Query: 409 ---GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG-M 464
               +  N  +Y I++   C+ G L+ +     L+L  G+  +    N+LL  LC    +
Sbjct: 90  CSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRV 149

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
            E   + L  + E+G  P++ S+++L++  C   +   A ELL
Sbjct: 150 GEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELL 192


>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
 gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 211/421 (50%), Gaps = 22/421 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           L+K +K+   +LE FN V+ Q   +H   T+  IL  L + +KF++ +++LR +  E+C 
Sbjct: 88  LLKTQKDYVLSLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSII-ESCS 146

Query: 128 --FHEGIFLNLMKHFSNCSLHERVLEMFHKI-----------HPITREK-----PSLKAI 169
             F   +F +L+  +  C     V ++  K                R K     P++++ 
Sbjct: 147 IDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESC 206

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +  L+ L+  ++ D+A  F +   +  R+ PN+   N++I   CK G L+ A  V +EM 
Sbjct: 207 NAYLSSLLNFSRGDIALAFYREMRRS-RIYPNSYTLNLVICACCKLGRLDKANVVFEEMG 265

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
               S PN+ +Y+TLI G C  G    A++L   ++ K+ + PD +T+N L++GFC+ GK
Sbjct: 266 TMGFS-PNVASYNTLIAGYCNKGLLSSAMKL-RSVMEKNGVPPDVVTFNTLVNGFCKVGK 323

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +  A K+   MK    +P    Y  L+NG+ K G  +    +F+EM  F +K D + Y  
Sbjct: 324 LQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNA 383

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI   C+ G+  +A  L++E+ E+G   +  TF+ ++ G C + + E A  + + +    
Sbjct: 384 LILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSS 443

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
                 ++R++L+  C+  + + A++LL  ML R   P      EL   L + G  + A 
Sbjct: 444 FTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAM 503

Query: 470 I 470
           +
Sbjct: 504 M 504



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 176/359 (49%), Gaps = 8/359 (2%)

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNF---LKYSNQHLRLKPNTCIFNILIKHH 212
           +H +T+ +   K+  + L  +IES  +D        L YS +     P+  +F++L K  
Sbjct: 122 LHILTKRR-KFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPH--VFDLLFKTF 178

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
                  +A +    MK      P + + +  +  L    R   A+  + EM  + +I P
Sbjct: 179 AHLKKFRNASDTFCRMKDYGF-LPTVESCNAYLSSLLNFSRGDIALAFYREM-RRSRIYP 236

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           ++ T N++I   C+ G++D+A  + E M   G +PNV +Y TL+ G+C +G L  A ++ 
Sbjct: 237 NSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLR 296

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
             M+   + PD + + TL+N FC+ G++ EA +L  EMK        VT+NI++ G  + 
Sbjct: 297 SVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKA 356

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G  E    + E++    +  +  +Y  ++   C++G+ +KA  L+R +  +G +P+ +T 
Sbjct: 357 GNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTF 416

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + L+   C    +E A      +++  F P   ++ +L+   C       A +LL+E++
Sbjct: 417 SALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEML 475


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 165/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++   +  ++ LAQ+    S     L+P+   FN L+  + K G L+  F  
Sbjct: 135 SLYFFNILMHXFCKEGEIRLAQSVFD-SITKWGLRPSVVSFNTLMNGYIKIGDLDEGFR- 192

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
           LK + ++   +P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 193 LKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLB-NGLVPNXVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I   M +    P++  Y TL+ G CK+G L++A ++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P+  T
Sbjct: 372 MLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 163/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHXFCKEGEIRLAQSVFDS-ITKWGLRPSVVSFNTLMNGYIKIGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G +P+V+ Y+ L+NG CKE K+ +A E+FDEM B  L P+ + +TTLI+
Sbjct: 190 GFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ ++M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEM 407



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 150/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P++++++TL++G  K G   E   L + +
Sbjct: 139 FNILMHXFCKEGEIRLAQSVFDSITKWGLR-PSVVSFNTLMNGYIKIGDLDEGFRL-KSV 196

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +    + PD  TY+VLI+G C+  K+D A ++ + M BNG  PN   +TTL++G CK G+
Sbjct: 197 MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I  +  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVP 414



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  +   +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DXYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVIEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ FCKEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G   D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+
Sbjct: 194 KSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ R ML +  LP   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGXCKEGDLETAFE 332


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 175/346 (50%), Gaps = 37/346 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I  H K G LE+ F +  +M    +  PN ITY+ L+ GLC+ GR  E   
Sbjct: 233 PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLK-PNAITYNVLLSGLCRAGRMGETSA 291

Query: 260 LFEEMVSKDQILPDALTYNVLIDGF----------------------------------- 284
           L +EM S+ +++PD  TY++L DG                                    
Sbjct: 292 LLDEMASQ-KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGL 350

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ GKV  A+++++ + N G  P    Y TL+NG+C+ G+L+ A   F +MK+  +KPD 
Sbjct: 351 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 410

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I Y  LIN  C+A R+  A +LL EM++ G    + TFN ++    R G++E+   +L +
Sbjct: 411 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 470

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +  +G+  N  SY  ++N  C+ G++ +A+ +L  M  +  LP+    N ++    + G 
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 530

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + A I +  +   G  P   ++ LL++ +C   ++  A E+++ L
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 576



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 189/376 (50%), Gaps = 8/376 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY  +L  L R  +     A+L +M  +        +  L    S     + +
Sbjct: 265 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 324

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           L +F K   + +T         S  LN L +  +V +A+  L+ S  +  L P   I+N 
Sbjct: 325 LSLFGKYLKNGVTIGD---YTCSILLNGLCKDGKVSIAEEVLQ-SLVNAGLVPTRVIYNT 380

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +C+ G LE AF    +MK   +  P+ ITY+ LI+GLCK  R   A +L  EM   
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIK-PDHITYNALINGLCKAERITNAQDLLMEM-QD 438

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + P   T+N LID + R G++++   ++  M+ NG  PNV +Y +++N FCK GK+ E
Sbjct: 439 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 498

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  + D+M +  + P+   Y  +I+ +   G  D+A  L+++MK  G    IVT+N+++ 
Sbjct: 499 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 558

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC + +I EA  ++  L    +  +  SY  +++  C +G ++KA++L + M   G   
Sbjct: 559 GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS 618

Query: 448 HYATSNELLVRLCKAG 463
              T ++L+  L  AG
Sbjct: 619 TVRTYHQLISGLGGAG 634



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 162/318 (50%), Gaps = 3/318 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+T  +N  ++     G L  A  +L+ M +     PN  +Y+ +I G+ + GR  +A+
Sbjct: 161 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 220

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+F+EM  +  +LP+ +TYN +IDG  +GG ++   ++ + M  +G  PN   Y  L++G
Sbjct: 221 EVFDEMTER-AVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSG 279

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+ G++ E   + DEM +  + PD   Y+ L +   R G     L L  +  + G    
Sbjct: 280 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 339

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T +I+L GLC++GK+  A  +L+ L   G+   +  Y  ++N  CQ GELE A     
Sbjct: 340 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 399

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  R   P + T N L+  LCKA    +A   L  + + G  P  +++  L++   R  
Sbjct: 400 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459

Query: 499 KLLFAFELLDELVIKESG 516
           +L   F +L E+  +E+G
Sbjct: 460 QLEKCFIVLSEM--QENG 475


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 166/318 (52%), Gaps = 1/318 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L PN   F  LI   CK+G+++ AFE+L+EM +     PN+ T++TLIDGLCK G   
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK-PNVYTHTTLIDGLCKKGWTE 346

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  LF ++V  D   P+  TY  +I+G+C+  K++RA+ ++  M+  G  PN   YTTL
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CK G    A E+ D M      P+   Y  +I+  C+ G +DEA  LL ++   G 
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           +AD VT+ I++   CR+     +L    K+   G   +  SY  +++  C++ +++++  
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESER 526

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L    +  G +P   T   ++   C+ G    A      +   G  P+S ++  L+  +C
Sbjct: 527 LFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLC 586

Query: 496 RGRKLLFAFELLDELVIK 513
           +  KL  A  L D ++ K
Sbjct: 587 KESKLDDARNLYDAMMDK 604



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 11/330 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F  +    G+  N  TY  +++   +  K    + +L +M  +    +   +  L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                     R  E+   +  + +E   P++   +  ++ L +   +D A   L   + H
Sbjct: 408 DGHCKVGNFVRAYEL---MDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L+ +   + IL+  HC++     +     +M K   + P++ +Y+TLI   C+  + +
Sbjct: 465 -GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFT-PDIHSYTTLISXFCRQKQMK 522

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+  LFEE VS   ++P   TY  +I G+CR G    A K+ + M N+GC P+   Y  L
Sbjct: 523 ESERLFEEAVSLG-LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGAL 581

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CKE KL +A+ ++D M +  L P  +   TL   +C+      A+ +L  +++R  
Sbjct: 582 ISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW 641

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKL 405
              I T N ++  LC EGK++ A     KL
Sbjct: 642 ---IRTVNTLVRKLCSEGKLDMAALFFHKL 668



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 156/310 (50%), Gaps = 3/310 (0%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +   ++ +  + G L+ A  ++ EM+ +Q    +  T + ++D     G    A  +F E
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQ-NQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVE 214

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  +  + PD +++ +++   C  G+V  A+K +  M   G   +    T +++ FC++G
Sbjct: 215 MCQRG-VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKG 273

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +      F +M    L P+ I +T LIN  C+ G + +A ELL+EM  RG K ++ T  
Sbjct: 274 YVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHT 333

Query: 384 IILGGLCREGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
            ++ GLC++G  E+A  +  KL   DG   N  +Y  ++N  C++ +L +A  LL  M  
Sbjct: 334 TLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQE 393

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G +P+  T   L+   CK G    A   +  + + GF P   ++  +++ +C+   L  
Sbjct: 394 QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDE 453

Query: 503 AFELLDELVI 512
           A+ LL+++ +
Sbjct: 454 AYRLLNKVSV 463



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           ++  F   GK+  A  ++  M+N G   +      +++     G ++ A+ +F EM    
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + PD + +  ++   C  GRV EA + L  M ERG   D  T  +I+   C++G +   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
           G   K+   G+  N  ++  ++N  C++G +++A ELL  M+ RG+ P+  T   L+  L
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 460 CKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           CK G  E A      LV   G+KP   ++  ++   C+  KL  A  LL  +  +E G +
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRM--QEQGLV 397


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 223/465 (47%), Gaps = 47/465 (10%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +  T+  +L  L A  +  +A+D VLR+MT   C      + NL+K   + +  
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179

Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----P 200
           +  LE+ H +         P + + +T LN   +    D A     YS  H  L     P
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA-----YSTYHEMLDRGILP 234

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ-----MSY-------------------- 235
           +   ++ +I   CK   ++ A EVL  M K+      M+Y                    
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 294

Query: 236 ---------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
                    PN++TYS+L++ LCKNGR  EA ++F+ M +K  + PD  TY  L+ G+  
Sbjct: 295 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM-TKRGLEPDIATYRTLLQGYAT 353

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G +     +++ M  NG  P+   +  L+  + K+ K+ +A  VF +M+   L P+ + 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y T+I+  C++G VD+A+   ++M + G   +I+ +  ++ GLC   K ++A  ++ ++ 
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             GI LN   +  +++  C++G + ++ +L  LM+  G  P   T N L+   C AG  +
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +A   L  +V +G KP+  ++  L+   CR  ++  A  L  E+V
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 578



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 206/426 (48%), Gaps = 14/426 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY+++++ L +  +      +   MT    +     +  L++ ++       +
Sbjct: 301 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT---KGAL 357

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +EM   +  + R   +P     +  +    +  +VD A        QH  L PN   +  
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH-GLNPNVVCYGT 416

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK G+++ A    ++M    ++ PN+I Y++LI GLC   ++ +A EL  EM+ +
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLT-PNIIVYTSLIHGLCTCDKWDKAEELILEMLDR 475

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              L + + +N +ID  C+ G+V  ++K+ + M   G  P++  Y TL++G C  GK+ E
Sbjct: 476 GICL-NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDE 534

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++   M +  +KPD + Y TLIN +CR  R+D+AL L KEM   G   +I+T+NIIL 
Sbjct: 535 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL    +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + + +       
Sbjct: 595 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 654

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE-LICRGRKLLFAFEL 506
              T N ++  L K G  ++A          G  P+  +++L+ E LI +G     + E 
Sbjct: 655 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG-----SLEE 709

Query: 507 LDELVI 512
           LD+L +
Sbjct: 710 LDDLFL 715



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 156/298 (52%), Gaps = 4/298 (1%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ P    + ILI   C+ G L+  F  L  + K      + IT++ L+ GLC + R  +
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRV-DAITFTPLLKGLCADKRTSD 145

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYT 313
           A+++    +++   +PD  +YN L+ G C   +   A +++  M ++   G  P+V +Y 
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYN 205

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T++NGF KEG   +A   + EM +  + PD + Y+++I   C+A  +D+A+E+L  M + 
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   D +T+N IL G C  G+ +EA+G L+K+  DG+  N  +Y  ++N+ C+ G   +A
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            ++   M  RG  P  AT   LL      G   +    L  +V  G +P+   + +L+
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 210/425 (49%), Gaps = 14/425 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +IF++++ ++G   + ATY T+L   A       + A+L  M     +    +F  L+
Sbjct: 325 ARKIFDSMT-KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             ++     ++ + +F K+  H +    P++    T +++L +S  VD A   + Y  Q 
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGL---NPNVVCYGTVIDVLCKSGSVDDA---MLYFEQM 437

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   L PN  ++  LI   C     + A E++ EM    +   N I ++++ID  CK GR
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL-NTIFFNSIIDSHCKEGR 496

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             E+ +LF+ MV +  + PD +TYN LIDG C  GK+D A K++  M + G  P++  Y 
Sbjct: 497 VIESEKLFDLMV-RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+NG+C+  ++ +A  +F EM +  + P+ I Y  ++       R   A EL   + + 
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G +++A
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV-E 492
            +L       G +P   T + +   L + G  E+       + E G   +S     +V +
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRK 735

Query: 493 LICRG 497
           L+ RG
Sbjct: 736 LLQRG 740



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 39/195 (20%)

Query: 340 LKPDTIGYTTLINCFCRAGRVD-----------------------------------EAL 364
           + P    Y  LI C CRAGR+D                                   +A+
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 365 EL-LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD---GIYLNKASYRIV 420
           ++ L+ M E GC  D+ ++N +L GLC E + +EAL +L  +  D   G   +  SY  V
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           LN   ++G+ +KA      ML RG LP   T + ++  LCKA   + A   L  +V+ G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 481 KPESDSWALLVELIC 495
            P+  ++  ++   C
Sbjct: 268 MPDCMTYNSILHGYC 282


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 204/423 (48%), Gaps = 22/423 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM------------------TYETCKFH 129
           + GF H   +Y  +   L   + +   + +LR+M                  T   C   
Sbjct: 3   RNGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPG 62

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
            G+F  L        + E  L+ F K+    R  P  ++ +  L+      + D  + F 
Sbjct: 63  FGVFDALFSVLIEEDMFEEALQCFSKMKRC-RVFPKTRSCNGLLHKFARLGKTDGMKRFF 121

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           K        KP    +NI+I   CK G +E+A  + +EMK   +  P+ +TY+++IDG  
Sbjct: 122 K-DMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGL-IPDTVTYNSMIDGYG 179

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K GR  + +  FEEM S     PD +TYN LI+ FC+ GK+ +  +    MK +G  PNV
Sbjct: 180 KVGRLDDTVYFFEEMKSM-SCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV 238

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
            +Y+TL++ FCKE  +Q+A + + +M+   L P+   YT+L++ +C+ G + +A  L  E
Sbjct: 239 VSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADE 298

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M + G + ++VT+  ++ GLC   +I+EA  +  K+   G+  N ASY  +++   +   
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +++A+ELL  M  RG  P        +  LC     E A + +  + E G K  +  +  
Sbjct: 359 MDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTT 418

Query: 490 LVE 492
           L++
Sbjct: 419 LMD 421



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 158/312 (50%), Gaps = 4/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P   +F+ L     +    E A +   +MK+ ++ +P   + + L+    + G+      
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRV-FPKTRSCNGLLHKFARLGKTDGMKR 119

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F++M+      P   TYN++ID  C+ G ++ A  + E MK  G  P+   Y ++++G+
Sbjct: 120 FFKDMIGAGS-KPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K G+L +    F+EMK+   +PD I Y TLINCFC+ G++ + LE  +EMK+ G K ++
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV 238

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V+++ ++   C+E  +++AL     +   G+  N+ +Y  +++  C+ G L  A  L   
Sbjct: 239 VSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADE 298

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGR 498
           M   G   +  T   L+  LC     ++A   LFG +V  G  P   S+  L+    + +
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAE-ELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 499 KLLFAFELLDEL 510
            +  A ELLDE+
Sbjct: 358 NMDRALELLDEM 369



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 186/419 (44%), Gaps = 40/419 (9%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY  ++D + +    EA   +  +M +         + +++  +      +  +  F ++
Sbjct: 135 TYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
             ++ E P +   +T +N   +  ++     F +   Q   LKPN   ++ L+   CK  
Sbjct: 195 KSMSCE-PDVITYNTLINCFCKFGKLPKGLEFFREMKQS-GLKPNVVSYSTLVDAFCKED 252

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            ++ A +   +M++  +  PN  TY++L+D  CK G   +A  L +EM S+  +  + +T
Sbjct: 253 MMQQALKFYVDMRRLGL-VPNEHTYTSLVDAYCKIGNLSDAFRLADEM-SQVGVEWNVVT 310

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y  LIDG C   ++  A+++   M   G  PN+ +YT L++GF K   +  A E+ DEMK
Sbjct: 311 YTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMK 370

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI----------------- 379
              +KPD + Y T I   C   +++ A  ++ EM+E+G KA+                  
Sbjct: 371 GRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPS 430

Query: 380 ------------------VTFNIILGGLCREGKIEEALGMLEKLWYD-GIYLNKASYRIV 420
                             VTF +++ GLC+   + +A+    ++  D G+  N A Y  +
Sbjct: 431 EGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAM 490

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++  C++ ++E A  L   M  +G +P       L+    K G    A      + E+G
Sbjct: 491 IDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIG 549



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 79/395 (20%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  TY +++D   +  + +       +M   +C+     +  L+  F       +
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPK 221

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY--SNQHLRLKPNTCIFN 206
            LE F ++   +  KP++ + ST ++   +    D+ Q  LK+    + L L PN   + 
Sbjct: 222 GLEFFREMKQ-SGLKPNVVSYSTLVDAFCKE---DMMQQALKFYVDMRRLGLVPNEHTYT 277

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L+  +CK G L  AF +  EM +  + + N++TY+ LIDGLC   R +EA ELF +MV+
Sbjct: 278 SLVDAYCKIGNLSDAFRLADEMSQVGVEW-NVVTYTALIDGLCDVERIKEAEELFGKMVT 336

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP------------------- 307
              ++P+  +Y  LI GF +   +DRA ++++ MK  G  P                   
Sbjct: 337 AG-VIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIE 395

Query: 308 ----------------NVFNYTTLMN---------------------------------- 317
                           N F YTTLM+                                  
Sbjct: 396 AAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLI 455

Query: 318 -GFCKEGKLQEAKEVFDEMKN-FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
            G CK   + +A + F  + N F L+ +   YT +I+  C+  +V+ A  L ++M ++G 
Sbjct: 456 DGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGL 515

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
             D   +  ++ G  ++G + +AL + +K+   G+
Sbjct: 516 VPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 5/289 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY +++D   +         +  +M+    +++   +  L+    +    +  
Sbjct: 268 GLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEA 327

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E+F K+       P+L + +  ++  +++  +D A   L    +   +KP+  ++   I
Sbjct: 328 EELFGKM-VTAGVIPNLASYTALIHGFVKAKNMDRALELLD-EMKGRGIKPDLLLYGTFI 385

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C    +E+A  V+ EM++  +   N   Y+TL+D   K+    E + L EEM+  D 
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIK-ANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDI 444

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEA 328
            +  A+T+ VLIDG C+   V +A      + N+ G   N   YT +++G CKE +++ A
Sbjct: 445 EVT-AVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAA 503

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             +F++M    L PD   YT+LI+   + G V +AL L  +M E G ++
Sbjct: 504 TTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVES 552


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 167/278 (60%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N LI+G+ R G +D+
Sbjct: 131 GYPTSLYFFNILMHRFCKEGEIRLAQSVFDA-ITKCGLRPSVVSFNTLINGYIRLGDLDK 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G +P+V+  T L+NG CKE K+ EA E+F+EM +  L P+ + +TTLI+
Sbjct: 190 GFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C++GRVD ALE+ K+M  +G   D++T+N ++ GLCR+G +++A  ++ ++   G+  
Sbjct: 250 GHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G+LE A EL + M+             L+  LC+ G A DA   L
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE+ ++ +++   C+   +  A +LL E+
Sbjct: 370 REMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEM 407



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/250 (36%), Positives = 151/250 (60%), Gaps = 2/250 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN LI  + + G L+  F +   M  S + +P++ T + LI+GLCK  +  EA
Sbjct: 167 LRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGV-HPDVYTNTVLINGLCKESKMDEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M   G +P++  Y TL+ 
Sbjct: 226 NELFNEMLDKG-LVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C++G L++A+++  EM    LKPD I YTTLI+  C+ G ++ A EL K M E   + 
Sbjct: 285 GLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+     +Y +++N  C++G+++ A +LL
Sbjct: 345 DDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLL 404

Query: 438 RLMLCRGFLP 447
           + M   G +P
Sbjct: 405 KEMQRDGHVP 414



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 146/278 (52%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P++++++TLI+G  + G   +   L   M
Sbjct: 139 FNILMHRFCKEGEIRLAQSVFDAITKCGLR-PSVVSFNTLINGYIRLGDLDKGFRLKTAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  T  VLI+G C+  K+D A ++   M + G  PN   +TTL++G CK G+
Sbjct: 198 HASG-VHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M      PD I Y TLI   CR G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A  + +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G  + A+  L  +   G  P
Sbjct: 377 LKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 161/336 (47%), Gaps = 26/336 (7%)

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
             + + + H R+     +  I++    K  +  + F  + E K +Q S  ++  +S LI 
Sbjct: 18  TMIHFLSTHQRILEAKSLIQIVVSRKGK-DSASAVFAAILETKGAQRS--DIYVFSGLIT 74

Query: 247 GLCKNGRFREAIELFEEMVSKDQILP-----------DALTYNVLIDGFCRGGKVDRAKK 295
              ++G  R+AIE F         +P             L Y  L+ GF         K+
Sbjct: 75  AYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGF--------YKE 126

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           I+E     G   +++ +  LM+ FCKEG+++ A+ VFD +    L+P  + + TLIN + 
Sbjct: 127 ILE----CGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYI 182

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R G +D+   L   M   G   D+ T  +++ GLC+E K++EA  +  ++   G+  N  
Sbjct: 183 RLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGV 242

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  +++  C+ G ++ A+E+ + ML +G+ P   T N L+  LC+ G  + A   +  +
Sbjct: 243 TFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEM 302

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              G KP+  ++  L++  C+   L  AFEL   ++
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMI 338


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 39/352 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           ++P+   + IL+   CK G +  A  VL  M +  +   P+++T +T++DGLCK+GR +E
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227

Query: 257 AIELFEE-MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           A+   E+ M S     P+ +TYN LID FCR G +  A +++E M+N G   N+    T+
Sbjct: 228 ALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTI 287

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLK---------------------------------- 341
           + G C+ G+   A E F E +    +                                  
Sbjct: 288 VGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 342 ---PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              PD I Y T+I+   +AGR+++A  +   MKE G K D   +NI++ G CR+ ++ EA
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             +L+++   GI  +  +Y  +L+ SC+ G+     ELL  M+  G  P   T   L+  
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            CK G  ++A   L  + E G  P +  +  L++ +C+   +  A EL DE+
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 42/345 (12%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFL--KYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           +P +  ++T ++ L +S +V  A  F+  + S+ H    PNT  +N LI   C+ G +  
Sbjct: 206 RPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVH-GCPPNTVTYNCLIDAFCRVGNISM 264

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR-------FRE----------------- 256
           A+E++++M+   +   N++T +T++ GLC+ GR       FRE                 
Sbjct: 265 AYELVEKMENEGVPQ-NIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYST 323

Query: 257 -------------AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
                        A+ELF E +S+    PDA+ Y  +I G  + G+++ A  +   MK  
Sbjct: 324 LVGALLHTNNVGMAMELFHEKMSEGHS-PDAIMYFTMISGLTQAGRLEDACSMASSMKEA 382

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G   +   Y  L+ GFC++ +L EA E+  EMK   ++PD   Y TL++  C+AG     
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            ELL +M + GC+  ++TF  ++ G C+ GKI+EAL +L  +   GI+ N   Y  +++F
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDF 502

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            C++G+++ AIEL   M  +    +  T N LL  L    M E A
Sbjct: 503 LCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 165/351 (47%), Gaps = 8/351 (2%)

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           +S   G   N  TY  ++D   R         ++ +M  E    +      ++       
Sbjct: 236 MSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAG 295

Query: 145 LHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFL--KYSNQHLRLKPN 201
                LE F +   +  E K +    ST +  L+ +N V +A      K S  H    P+
Sbjct: 296 RTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH---SPD 352

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
             ++  +I    + G LE A  +   MK++     +   Y+ LI G C+  R  EA EL 
Sbjct: 353 AIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL-DTKAYNILIAGFCRKKRLHEAYELL 411

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           +EM  +  I PD  TYN L+ G C+ G      +++  M ++GC P+V  + TL++G+CK
Sbjct: 412 QEM-KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCK 470

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            GK+ EA  +   M    + P+ + Y TLI+  C+ G VD A+EL  EMKE+   A++ T
Sbjct: 471 VGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTT 530

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           FN +L GL  +   E+A  +++++  +  + +  +  +++ +    GE ++
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 180/404 (44%), Gaps = 48/404 (11%)

Query: 154 HKIHPITREKPSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
           H++ P     PS   +S  L+ LL   +  + A  FL  S       P+   FN ++   
Sbjct: 92  HRVPP-----PSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAAL 146

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QIL 271
            +   +     +   M+      P+++TY  L++GLCK GR  +A+ + + M  +D  I 
Sbjct: 147 ARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIR 206

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIME--FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           PD +T N ++DG C+ G+V  A   +E      +GC PN   Y  L++ FC+ G +  A 
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE--RGCKADIVTFNIILG 387
           E+ ++M+N  +  + +   T++   CRAGR   ALE  +E +      K + VT++ ++G
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 388 -----------------------------------GLCREGKIEEALGMLEKLWYDGIYL 412
                                              GL + G++E+A  M   +   G  L
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL 386

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y I++   C+K  L +A ELL+ M   G  P   T N LL   CKAG        L
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
             +++ G +P   ++  LV   C+  K+  A  +L  +   ESG
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM--DESG 488



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 2/183 (1%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + + ++P+ C +N L+   CK G   +  E+L +M       P++IT+ TL+ G CK G+
Sbjct: 415 KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ-PSVITFGTLVHGYCKVGK 473

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA+ +   M  +  I P+ + YN LID  C+ G VD A ++ + MK      NV  + 
Sbjct: 474 IDEALRILRSM-DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFN 532

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G   +   ++A E+ D+M+     PD +    L+      G  D     +++ +  
Sbjct: 533 ALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHT 592

Query: 374 GCK 376
             K
Sbjct: 593 ASK 595


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 167/313 (53%), Gaps = 12/313 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N LI  +C +G L+ A+    EM  S+    +L+TY+  I  L   GR  +A
Sbjct: 317 LVPNAVTYNALIDGYCNKGDLDKAYAYRDEMI-SKGIMASLVTYNLFIHALFMEGRMGDA 375

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + +EM  K  ++PDA+T+N+LI+G+CR G   RA  +++ M   G  P +  YT+L+ 
Sbjct: 376 DNMIKEMREKG-MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIY 434

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              K  +++EA  +F +++   L PD I +  LI+  C  G +D A +LLKEM       
Sbjct: 435 VLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLP 494

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D +T+N ++ G CREGK+EEA  +L+++   GI  +  SY  +++   ++G+++ A  + 
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVR 554

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  GF P   T N L+  LCK    E A   L  +V  G  P+  ++  ++E     
Sbjct: 555 DEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIE----- 609

Query: 498 RKLLFAFELLDEL 510
                A E +D+L
Sbjct: 610 -----AMETVDDL 617



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 194/388 (50%), Gaps = 11/388 (2%)

Query: 124 ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
           ETC     +FL L +      L+  +  M          + SL   +  +N+L +  ++ 
Sbjct: 182 ETCNQMLSLFLKLNRTQMAWVLYAEMFRM--------NIRSSLYTFNIMINVLCKEGKLK 233

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
            A+ F+ +  + L +KPN   +N +I  HC RG  + A  + + MK   +  P+  TY++
Sbjct: 234 KAKEFIGHM-ETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE-PDCYTYNS 291

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
            I GLCK GR  EA  L  +M+ +  ++P+A+TYN LIDG+C  G +D+A    + M + 
Sbjct: 292 FISGLCKEGRLEEASGLICKML-EGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISK 350

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G   ++  Y   ++    EG++ +A  +  EM+   + PD + +  LIN +CR G    A
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRA 410

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             LL EM  +G +  +VT+  ++  L +  +++EA  +  K+  +G+  +   +  +++ 
Sbjct: 411 FGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG 470

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C  G +++A +LL+ M     LP   T N L+   C+ G  E+A   L  +   G KP+
Sbjct: 471 HCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPD 530

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             S+  L+    +   +  AF + DE++
Sbjct: 531 HISYNTLISGYSKRGDMKDAFRVRDEMM 558



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 163/311 (52%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN    N ++    K    + A+ +  EM +  +   +L T++ +I+ LCK G+ ++A E
Sbjct: 179 PNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIR-SSLYTFNIMINVLCKEGKLKKAKE 237

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
               M +   + P+ +TYN +I G C  GK  RA+ I + MK+ G  P+ + Y + ++G 
Sbjct: 238 FIGHMETLG-VKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGL 296

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG+L+EA  +  +M    L P+ + Y  LI+ +C  G +D+A     EM  +G  A +
Sbjct: 297 CKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASL 356

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N+ +  L  EG++ +A  M++++   G+  +  ++ I++N  C+ G+ ++A  LL  
Sbjct: 357 VTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDE 416

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ +G  P   T   L+  L K    ++A      + + G  P+   +  L++  C    
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476

Query: 500 LLFAFELLDEL 510
           +  AF+LL E+
Sbjct: 477 IDRAFQLLKEM 487



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 145/286 (50%), Gaps = 1/286 (0%)

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           + + ++     + +  L+   C+  +  EA+E F  ++ +   +P+  T N ++  F + 
Sbjct: 136 LARDRVDAKTTLIFDLLVRAYCELKKPNEALECFY-LIKEKGFVPNIETCNQMLSLFLKL 194

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            +   A  +   M       +++ +  ++N  CKEGKL++AKE    M+   +KP+ + Y
Sbjct: 195 NRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTY 254

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            T+I+  C  G+   A  + + MK++G + D  T+N  + GLC+EG++EEA G++ K+  
Sbjct: 255 NTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLE 314

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  N  +Y  +++  C KG+L+KA      M+ +G +    T N  +  L   G   D
Sbjct: 315 GGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGD 374

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A   +  + E G  P++ +  +L+   CR      AF LLDE+V K
Sbjct: 375 ADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK 420


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 182/313 (58%), Gaps = 14/313 (4%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N  ++N +I    K   +  AF++  EM   ++S P+++TYS LI G    G+ ++AI+L
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRIS-PDVVTYSALIRGFFIVGKLKDAIDL 265

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M+ ++ I PD  T+N+L+DGFC+ G++ +AK +++ M      PNV  + TL++GFC
Sbjct: 266 FNKMILEN-IKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFC 324

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+ K++E K VF  M    +KP+ + Y +L++ +C   +V++A ++   M +RG  A++ 
Sbjct: 325 KDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVH 384

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           ++NI++ G C+  K+++A+ +  ++ +  I  +  +Y  +++  C+ G++  A +L+  M
Sbjct: 385 SYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEM 444

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG  P+  T N +L  L            L  L + G +P   +  +L++ +C+  KL
Sbjct: 445 HDRGQPPNIITYNSILNAL------------LTKLKDQGIQPNMHTDTILIKGLCQSGKL 492

Query: 501 LFAFELLDELVIK 513
             A ++ ++L++K
Sbjct: 493 EAARKVFEDLLVK 505



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 163/314 (51%), Gaps = 4/314 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           + PN   FNILI   C+ G +  AF VL ++ K  M Y P++IT +T I G C  G+  +
Sbjct: 99  INPNFVTFNILINCFCQLGLIPFAFSVLAKILK--MGYEPDIITLNTFIKGFCLKGQIHQ 156

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+   +++V+    L D ++Y  LI+G C+ G+   A +++  +       N   Y T++
Sbjct: 157 ALNFHDKLVALGFHL-DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVI 215

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G  K+  + +A +++ EM    + PD + Y+ LI  F   G++ +A++L  +M     K
Sbjct: 216 DGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIK 275

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+ TFNI++ G C+EG++++A  +L+ +    I  N +++  +++  C+  ++++   +
Sbjct: 276 PDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             +M+ +G  P+  T   L+   C       A      + + G      S+ +++   C+
Sbjct: 336 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCK 395

Query: 497 GRKLLFAFELLDEL 510
            +K+  A +L  E+
Sbjct: 396 IKKVDKAMKLFIEM 409



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 167/335 (49%), Gaps = 28/335 (8%)

Query: 184 LAQNFLKYSNQHLRLKPN-----TCIFNILIKHHCKRGTLESAFE---VLKEMKKS---- 231
           L +NF+ YS+       N       +FN L+    +  TL +AFE   +L  + KS    
Sbjct: 30  LQKNFIPYSSISTTFHSNDVDGAVSLFNSLLH---QNPTL-TAFEFNKILGSLVKSKHYH 85

Query: 232 -------QMSY----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
                  QM +    PN +T++ LI+  C+ G    A  +  +++ K    PD +T N  
Sbjct: 86  TVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL-KMGYEPDIITLNTF 144

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I GFC  G++ +A    + +   G + +  +Y TL+NG CK G+ + A ++   +   L+
Sbjct: 145 IKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLV 204

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           + + + Y T+I+   +   V++A +L  EM  +    D+VT++ ++ G    GK+++A+ 
Sbjct: 205 QLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAID 264

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +  K+  + I  +  ++ I+++  C++G L+KA  +L +M+ +   P+ +T N L+   C
Sbjct: 265 LFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFC 324

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           K    ++       +++ G KP   ++  L++  C
Sbjct: 325 KDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 359



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           ++ ++  L K+  +   + L ++M   + I P+ +T+N+LI+ FC+ G +  A  ++  +
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQM-EFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKI 129

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G  P++    T + GFC +G++ +A    D++       D + Y TLIN  C+ G  
Sbjct: 130 LKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET 189

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
             AL+LL+ +  +  + + V +N ++ G+ ++  + +A  +  ++    I  +  +Y  +
Sbjct: 190 RAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSAL 249

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +      G+L+ AI+L   M+     P   T N L+   CK G  + A   L  ++    
Sbjct: 250 IRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDI 309

Query: 481 KPESDSWALLVELICRGRKL 500
           KP   ++  LV+  C+ RK+
Sbjct: 310 KPNVSTFNTLVDGFCKDRKM 329



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 2/278 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N I YS++      N     A+ LF  ++ ++  L  A  +N ++    +         +
Sbjct: 33  NFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLT-AFEFNKILGSLVKSKHYHTVLSL 90

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            + M+  G NPN   +  L+N FC+ G +  A  V  ++     +PD I   T I  FC 
Sbjct: 91  SQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCL 150

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++ +AL    ++   G   D V++  ++ GLC+ G+   AL +L ++    + LN   
Sbjct: 151 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVM 210

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  V++   +   +  A +L   M+ +   P   T + L+      G  +DA      ++
Sbjct: 211 YNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI 270

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
               KP+  ++ +LV+  C+  +L  A  +LD ++I++
Sbjct: 271 LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQD 308


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 205/430 (47%), Gaps = 14/430 (3%)

Query: 87  EQKGFNHNNATYATILD---KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           E+ GF     TY T+L+   K  RYK      A +  + Y  CK  E           N 
Sbjct: 260 EENGFVPTIVTYNTLLNWYCKKGRYK------AAIELIDYMICKGIEADVCTYNVFIDNL 313

Query: 144 SLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN 201
             + R  + +  +  + +E   P+    +T +N  ++  ++ +A       ++   L PN
Sbjct: 314 CTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK-FDLSPN 372

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N LI  HC  G  E A  +L  M+ + +   N +TY TL++GLCK+ +F  A  L 
Sbjct: 373 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRL-NEVTYGTLLNGLCKHEKFELAKRLL 431

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           E M   D ++   + Y VLIDG C+ G +D A +++  M  +G NP+V  Y++L+NGFC+
Sbjct: 432 ERMRVNDMVVGH-IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCR 490

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G ++ AKE+   M    L  + I Y+TLI  FC+ G V EA+++   M   G  AD  T
Sbjct: 491 VGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFT 550

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
            N+++  LCR+GK+ EA   L  +   G+  N  +Y  ++N     G+   A      M+
Sbjct: 551 CNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMI 610

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P + T   LL  LCK G   +A   L  L  +    +S  +  L+   C+   L 
Sbjct: 611 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 670

Query: 502 FAFELLDELV 511
            A  L D++V
Sbjct: 671 EAVALFDKMV 680



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 218/437 (49%), Gaps = 11/437 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E F  V    GF  +  T   IL  + + K+ E V ++ R+M+ +    + G F  L+
Sbjct: 182 AVETFELVG-LVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 240

Query: 138 KHF---SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
                  N      +L+   +   +    P++   +T LN   +  +   A   + Y   
Sbjct: 241 NGLCVEGNLKKAGNLLKQMEENGFV----PTIVTYNTLLNWYCKKGRYKAAIELIDYMIC 296

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              ++ + C +N+ I + C       A+ +LK+M+K  +S PN +TY+TLI+G  K G+ 
Sbjct: 297 K-GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS-PNEVTYNTLINGFVKEGKI 354

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A ++F EM SK  + P+ +TYN LI G C  G  + A ++++ M+  G   N   Y T
Sbjct: 355 GVAAQVFNEM-SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 413

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK  K + AK + + M+   +    I YT LI+  C+ G +DEA++L+  M + G
Sbjct: 414 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              D++T++ ++ G CR G I+ A  ++ +++  G+ LNK  Y  ++   CQ G + +A+
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ++  +M C G    + T N L+  LC+ G   +A   L  +  +G  P S ++  ++   
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593

Query: 495 CRGRKLLFAFELLDELV 511
                 L AF   D+++
Sbjct: 594 GSIGDPLNAFSFFDDMI 610



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 166/349 (47%), Gaps = 2/349 (0%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           + PS     + L  L +   +  A+ FL     ++    ++ ++N L+   CK G L  A
Sbjct: 614 QHPSFFTYGSLLKGLCKGGNLVEAKKFLN-RLHYIPGAVDSVMYNTLLAETCKSGNLHEA 672

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +  +M ++ +  P+  TYS+L+ GLC+ G+   A+ LF   + +  + P+ + Y  L+
Sbjct: 673 VALFDKMVQNNV-LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 731

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG  + G    A    E M   G  P+   +  +++   + G++ +A + F  M+ + + 
Sbjct: 732 DGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVC 791

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+   Y  L++ F +   +   L L   M   G   D +TF+ ++ GL + G  +  + +
Sbjct: 792 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 851

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L K+  +G   ++ ++ I++N   + G++ KA +L+  M   G  P   T N +   L K
Sbjct: 852 LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 911

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                ++ + L  ++E G  P+   +  L+  +CR   +  AF+L DE+
Sbjct: 912 KSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 960



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 36/342 (10%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P++  ++ L+   C++G   +A  +          +PN + Y+ L+DGL K G  + A  
Sbjct: 686  PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 745

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             FEEM+ K    PD + +N +ID   R G++ +A      M+  G  PN+  Y  L++GF
Sbjct: 746  FFEEMMKKGTC-PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 804

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             K+  L     ++  M    + PD + + +LI    ++G  D  ++LL +M   G  AD 
Sbjct: 805  SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQ 864

Query: 380  VTFNIILGGLCREGKIEEALGM-----------------------------------LEK 404
             TFNI++      GK+ +A  +                                   L +
Sbjct: 865  FTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHE 924

Query: 405  LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            +  +G+    A Y  ++N  C+ G+++ A +L   M   GF  H    + ++  L   G 
Sbjct: 925  MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 984

Query: 465  AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
             EDA + L  ++ M   P   ++  L+   CR  K+  A +L
Sbjct: 985  TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 4/308 (1%)

Query: 208 LIKHHCKRGT-LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +++H C+ G   +S F  L +      S P++  +  LI    K G    A+E FE +V 
Sbjct: 134 ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFE-LVG 190

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                P   T N+++    +  + +    +   M + G  PNV  +  L+NG C EG L+
Sbjct: 191 LVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLK 250

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A  +  +M+     P  + Y TL+N +C+ GR   A+EL+  M  +G +AD+ T+N+ +
Sbjct: 251 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFI 310

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC   +  +A  +L+K+  + I  N+ +Y  ++N   ++G++  A ++   M      
Sbjct: 311 DNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 370

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+  T N L+   C  G  E+A   L  +   G +    ++  L+  +C+  K   A  L
Sbjct: 371 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 430

Query: 507 LDELVIKE 514
           L+ + + +
Sbjct: 431 LERMRVND 438



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 157/323 (48%), Gaps = 10/323 (3%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            PN   +NIL+    K+  L     +   M +  + +P+ +T+ +LI GL K+G     ++
Sbjct: 792  PNLATYNILLHGFSKKQALLRYLSLYSTMMREGI-FPDKLTFHSLILGLSKSGIPDLGVK 850

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            L  +M+  +  L D  T+N+LI+ +   GK+ +A  ++ FM   G  P+   Y  + NG 
Sbjct: 851  LLGKMI-MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 909

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             K+   +E+  V  EM    + P    Y TLIN  CR G +  A +L  EM+  G  +  
Sbjct: 910  NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 969

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            V  + ++ GL   GK E+A+ +L+ +    +    A++  +++  C+  ++ +A++L  +
Sbjct: 970  VAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGV 1029

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK---PESDSWALLVELICR 496
            M   G        N L++ +C  G   D+A A     EM  +   P   ++A+LV+ I  
Sbjct: 1030 MELCGLKLDVVAYNVLIMGMCANG---DSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1086

Query: 497  GRKLLFAFELLDELVIKESGTIQ 519
               L+   +LL +L  +E G I 
Sbjct: 1087 ANNLIQGEKLLTDL--QERGLIS 1107



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 129/251 (51%), Gaps = 2/251 (0%)

Query: 205  FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
            FNILI  + + G +  AF+++  M    + +P+  TY+ + +GL K   FRE+  +  EM
Sbjct: 867  FNILINKYSESGKMRKAFDLVNFMNTLGV-FPDRDTYNHIFNGLNKKSAFRESTVVLHEM 925

Query: 265  VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            + ++ ++P    Y  LI+G CR G +  A K+ + M+  G   +    + ++ G    GK
Sbjct: 926  L-ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 984

Query: 325  LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             ++A  V D M    L P    +TTL++ FCR  ++ EAL+L   M+  G K D+V +N+
Sbjct: 985  TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 1044

Query: 385  ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            ++ G+C  G    A  + E++ +  +  N  +Y ++++       L +  +LL  +  RG
Sbjct: 1045 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104

Query: 445  FLPHYATSNEL 455
             +    ++  L
Sbjct: 1105 LISWGGSTQHL 1115



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/183 (19%), Positives = 78/183 (42%), Gaps = 3/183 (1%)

Query: 88   QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            + G    +A Y T+++ + R    +    +  +M       HE     +++   +C   E
Sbjct: 927  ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986

Query: 148  RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              + +   +  + R  P++   +T ++      ++  A   LK   +   LK +   +N+
Sbjct: 987  DAMLVLDHMLRM-RLLPTIATFTTLMHRFCRDAKIAEALK-LKGVMELCGLKLDVVAYNV 1044

Query: 208  LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            LI   C  G   +AFE+ +EM+   +  PN+ TY+ L+D +       +  +L  ++  +
Sbjct: 1045 LIMGMCANGDSAAAFELYEEMRHRDLC-PNITTYAVLVDAISAANNLIQGEKLLTDLQER 1103

Query: 268  DQI 270
              I
Sbjct: 1104 GLI 1106


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 223/465 (47%), Gaps = 47/465 (10%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +  T+  +L  L A  +  +A+D VLR+MT   C      + NL+K   + +  
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179

Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----P 200
           +  LE+ H +         P + + +T LN   +    D A     YS  H  L     P
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA-----YSTYHEMLDRGILP 234

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ-----MSY-------------------- 235
           +   ++ +I   CK   ++ A EVL  M K+      M+Y                    
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 294

Query: 236 ---------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
                    PN++TYS+L++ LCKNGR  EA ++F+ M +K  + PD  TY  L+ G+  
Sbjct: 295 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM-TKRGLEPDIATYRTLLQGYAT 353

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G +     +++ M  NG  P+   +  L+  + K+ K+ +A  VF +M+   L P+ + 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y T+I+  C++G VD+A+   ++M + G   +I+ +  ++ GLC   K ++A  ++ ++ 
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             GI LN   +  +++  C++G + ++ +L  LM+  G  P   T N L+   C AG  +
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +A   L  +V +G KP+  ++  L+   CR  ++  A  L  E+V
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 578



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 206/426 (48%), Gaps = 14/426 (3%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY+++++ L +  +      +   MT    +     +  L++ ++       +
Sbjct: 301 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT---KGAL 357

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +EM   +  + R   +P     +  +    +  +VD A        QH  L PN   +  
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH-GLNPNVVCYGT 416

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK G+++ A    ++M    ++ PN+I Y++LI GLC   ++ +A EL  EM+ +
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLT-PNIIVYTSLIHGLCTCDKWDKAEELILEMLDR 475

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I  + + +N +ID  C+ G+V  ++K+ + M   G  P++  Y TL++G C  GK+ E
Sbjct: 476 -GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDE 534

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++   M +  +KPD + Y TLIN +CR  R+D+AL L KEM   G   +I+T+NIIL 
Sbjct: 535 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL    +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + + +       
Sbjct: 595 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 654

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE-LICRGRKLLFAFEL 506
              T N ++  L K G  ++A          G  P+  +++L+ E LI +G     + E 
Sbjct: 655 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG-----SLEE 709

Query: 507 LDELVI 512
           LD+L +
Sbjct: 710 LDDLFL 715



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 156/298 (52%), Gaps = 4/298 (1%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ P    + ILI   C+ G L+  F  L  + K      + IT++ L+ GLC + R  +
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRV-DAITFTPLLKGLCADKRTSD 145

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYT 313
           A+++    +++   +PD  +YN L+ G C   +   A +++  M ++   G  P+V +Y 
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYN 205

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T++NGF KEG   +A   + EM +  + PD + Y+++I   C+A  +D+A+E+L  M + 
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   D +T+N IL G C  G+ +EA+G L+K+  DG+  N  +Y  ++N+ C+ G   +A
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            ++   M  RG  P  AT   LL      G   +    L  +V  G +P+   + +L+
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 203/411 (49%), Gaps = 13/411 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +IF++++ ++G   + ATY T+L   A       + A+L  M     +    +F  L+
Sbjct: 325 ARKIFDSMT-KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             ++     ++ + +F K+  H +    P++    T +++L +S  VD A   + Y  Q 
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGL---NPNVVCYGTVIDVLCKSGSVDDA---MLYFEQM 437

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   L PN  ++  LI   C     + A E++ EM    +   N I ++++ID  CK GR
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL-NTIFFNSIIDSHCKEGR 496

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             E+ +LF+ MV +  + PD +TYN LIDG C  GK+D A K++  M + G  P++  Y 
Sbjct: 497 VIESEKLFDLMV-RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+NG+C+  ++ +A  +F EM +  + P+ I Y  ++       R   A EL   + + 
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G +++A
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
            +L       G +P   T + +   L + G  E+       + E G   +S
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 39/195 (20%)

Query: 340 LKPDTIGYTTLINCFCRAGRVD-----------------------------------EAL 364
           + P    Y  LI C CRAGR+D                                   +A+
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 365 EL-LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD---GIYLNKASYRIV 420
           ++ L+ M E GC  D+ ++N +L GLC E + +EAL +L  +  D   G   +  SY  V
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           LN   ++G+ +KA      ML RG LP   T + ++  LCKA   + A   L  +V+ G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 481 KPESDSWALLVELIC 495
            P+  ++  ++   C
Sbjct: 268 MPDCMTYNSILHGYC 282


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 235/487 (48%), Gaps = 23/487 (4%)

Query: 28  SPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQC--ALEIFNTV 85
           S L ++ A  P   PP   S            ++H          +EP    AL+ F  +
Sbjct: 17  SSLPLVLATRPLNPPPSSAS------LLHESHVAHAL-------RREPNVLYALQHFQYL 63

Query: 86  SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           +    F H   TY  +++KL R  + +A+  +L QM  E     +  F+ ++  + N  L
Sbjct: 64  TNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGL 123

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCI 204
            +R L+MF++I      KP++K  +  L+ L+  +          Y N     ++PN   
Sbjct: 124 GDRALKMFYRIKEFGC-KPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFT 182

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N+L+K  CK G L+ A ++L EM K +   P+ ++Y+T++  +C++GR  EA E+    
Sbjct: 183 YNVLLKALCKNGKLDGACKLLVEMSK-RGCVPDGVSYTTVVAAMCEDGRVEEAREVARRF 241

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            ++  +       N LI G CR G+V     +M+ M  NG +PNV +Y+++++     G+
Sbjct: 242 GAEGVV----SVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGE 297

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++ A  V  +M     +P+   +++L+  +   GRV E + L + M   G + ++V +N 
Sbjct: 298 VELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNT 357

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGI-YLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +L GLC  G + EA+ +  ++  D     N  +Y  +++   + G+L+ A E+   M+  
Sbjct: 358 LLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNC 417

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P+      ++  LCK  M + A   +  +   G  P   ++   ++ +C G ++L+A
Sbjct: 418 GVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWA 477

Query: 504 FELLDEL 510
             ++D++
Sbjct: 478 MRVVDQM 484



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 203/437 (46%), Gaps = 41/437 (9%)

Query: 80  EIFNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E+F  + E    G + N  +Y++++  L+   + E   AVL +M    C+ +   F +LM
Sbjct: 265 EVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLM 324

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K +    L  RV E                 +     +++E                   
Sbjct: 325 KGYF---LGGRVGE----------------GVGLWRVMVLEG------------------ 347

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN  ++N L+   C  G L  A +V   M+K     PN+ TYSTL+ G  K G  + A
Sbjct: 348 VRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGA 407

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E++ +MV+   + P+ + Y  ++D  C+    D+A ++++ M  +GC P V  + T + 
Sbjct: 408 SEVWNKMVNCG-VRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIK 466

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  G++  A  V D+M+ +   PDT  Y  L++       + EA EL++E++ER  + 
Sbjct: 467 GLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVEL 526

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++VT+N ++ G    GK E  L +L ++  +G+  +  +  +V+    + G++  AI+ L
Sbjct: 527 NLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFL 586

Query: 438 -RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            R+   +   P       LL  +C +   E+A + L  ++  G  P   +W +LV    +
Sbjct: 587 DRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFK 646

Query: 497 GRKLLFAFELLDELVIK 513
               +    +LD+++ K
Sbjct: 647 KLGHMGPIRILDDILGK 663



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 8/262 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q A E++N +    G   N   Y +++D L +   F+    ++  M  + C      F  
Sbjct: 405 QGASEVWNKMV-NCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNT 463

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
            +K    C    RVL     +  + R    P  +  +  L+ L   N++  A   ++   
Sbjct: 464 FIKGLC-CG--GRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELE 520

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +  +++ N   +N ++      G  E   +VL  M  + +  P+ IT + +I    K G+
Sbjct: 521 ER-KVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVK-PDAITVNVVIYAYSKLGK 578

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            R AI+  + + +  ++ PD + +  L+ G C    ++ A   +  M N G  PN+  + 
Sbjct: 579 VRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWD 638

Query: 314 TLMNGFCKEGKLQEAKEVFDEM 335
            L+ GF K+        + D++
Sbjct: 639 VLVRGFFKKLGHMGPIRILDDI 660


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 165/316 (52%), Gaps = 1/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   F  LI   CK+G+++ AFE+L+EM +     PN+ T++TLIDGLCK G   +A
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK-PNVYTHTTLIDGLCKKGWTEKA 348

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF ++V  D   P+  TY  +I+G+C+  K++RA+ ++  M+  G  PN   YTTL++
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G    A E+ D M      P+   Y  +I+  C+ G +DEA  LL ++   G +A
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQA 468

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT+ I++   CR+     +L    K+   G   +  SY  +++  C++ +++++  L 
Sbjct: 469 DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLF 528

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
              +  G +P   T   ++   C+ G    A      +   G  P+S ++  L+  +C+ 
Sbjct: 529 EEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKE 588

Query: 498 RKLLFAFELLDELVIK 513
            KL  A  L D ++ K
Sbjct: 589 SKLDDARNLYDAMMDK 604



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 157/310 (50%), Gaps = 3/310 (0%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +   ++ +  + G L+ A  ++ EM+ +Q   P+  T + ++D     G    A  +F E
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQ-NQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVE 214

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  +  + PD +++ +++   C  G+V  A++ +  M   G   +    T +++ FC++G
Sbjct: 215 MCQRG-VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKG 273

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +      F +M    L P+ I +T LIN  C+ G + +A ELL+EM  RG K ++ T  
Sbjct: 274 YVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHT 333

Query: 384 IILGGLCREGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
            ++ GLC++G  E+A  +  KL   DG   N  +Y  ++N  C++ +L +A  LL  M  
Sbjct: 334 TLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQE 393

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G +P+  T   L+   CK G    A   +  + + GF P   ++  +++ +C+   L  
Sbjct: 394 QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDE 453

Query: 503 AFELLDELVI 512
           A+ LL+++ +
Sbjct: 454 AYRLLNKVSV 463



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 11/330 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F  +    G+  N  TY  +++   +  K    + +L +M  +    +   +  L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                     R  E+   +  + +E   P++   +  ++ L +   +D A   L   + H
Sbjct: 408 DGHCKVGNFVRAYEL---MDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L+ +   + IL+  HC++     +     +M K   + P++ +Y+TLI   C+  + +
Sbjct: 465 -GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFT-PDIHSYTTLISTFCRQKQMK 522

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+  LFEE VS   ++P   TY  +I G+CR G    A K+ + M N+GC P+   Y  L
Sbjct: 523 ESERLFEEAVSLG-LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGAL 581

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CKE KL +A+ ++D M +  L P  +   TL   +C+      A+ +L  +++R  
Sbjct: 582 ISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW 641

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKL 405
              I T N ++  LC EGK++ A     KL
Sbjct: 642 ---IRTVNTLVRKLCSEGKLDMAALFFHKL 668



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           ++  F   GK+  A  ++  M+N G  P+      +++     G ++ A+ +F EM    
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + PD + +  ++   C  GRV EA   L  M ERG   D  T  +I+   C++G +   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
           G   K+   G+  N  ++  ++N  C++G +++A ELL  M+ RG+ P+  T   L+  L
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 460 CKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           CK G  E A      LV   G+KP   ++  ++   C+  KL  A  LL  +  +E G +
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRM--QEQGLV 397


>gi|225466731|ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g05600-like [Vitis vinifera]
          Length = 503

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 219/483 (45%), Gaps = 44/483 (9%)

Query: 55  KRSRFISHGAAISLIKCEKEPQCALEIFNTV-SEQKGFNHNNATYATILDKLARYKKFEA 113
           K  RF+       +I+ +K P  AL+IFN   S+   + HN   YAT+++ L    +   
Sbjct: 4   KWPRFLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRIAE 63

Query: 114 VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
           +  V+ QM  ++C+  + +F ++MK ++   + +  + +F K  P         + +T L
Sbjct: 64  MREVIDQMKQDSCECKDSVFSSVMKTYARAGMVDEAVSLF-KTLPQFNCVNWTGSFNTLL 122

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
            +L++ ++++ A       +    +K      N+L+   C+    + A  V +EM + Q 
Sbjct: 123 RILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEM-RYQC 181

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEM---VSKDQILPDALTYNVLIDGFCRGGKV 290
             P+  +Y  L+ GLC++GR  EA  L   M   +S+     D   Y  L+D  C  G V
Sbjct: 182 CSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGHV 241

Query: 291 DRAKKIMEFMKNNG----------------CN--------------------PNVFNYTT 314
           + A +I+  +   G                CN                    P++ +Y+ 
Sbjct: 242 EEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYSA 301

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK-EMKER 373
           +      E K+ EA +V DEM++   KP    Y   I   CR G V+EA++++K EM E 
Sbjct: 302 MAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKVIKEEMVED 361

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD-GIYLNKASYRIVLNFSCQKGELEK 432
            C   +  +NI+L GLCREGK   A+G LEK+    G   +K +Y I+++  C  G   +
Sbjct: 362 SCVPTVRLYNIVLKGLCREGKSAFAVGYLEKMARQVGCVADKETYSILVDGLCCDGRFVE 421

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  +L  ML R   P   T N L+  LC  G   DA I L  +V  G  P    W  LV 
Sbjct: 422 ASGILERMLIRSSSPGVETYNTLIRGLCLMGRQYDAVIWLEEMVVQGKLPAVSVWDSLVA 481

Query: 493 LIC 495
            +C
Sbjct: 482 SVC 484



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 158/344 (45%), Gaps = 46/344 (13%)

Query: 217 TLESAFEVLKEMKKSQMSYPNL----ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           T ++    LK   +++  +PN       Y+T+I+ L  +GR  E  E+ ++M        
Sbjct: 20  TQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRIAEMREVIDQMKQDSCECK 79

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D++ ++ ++  + R G VD A  + + +    C     ++ TL+    KE KL+ A  +F
Sbjct: 80  DSV-FSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNTLLRILVKESKLETACRLF 138

Query: 333 DEMK-NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            E    + +K        L++  C+  R D AL + +EM+ + C  D  ++ I++ GLC 
Sbjct: 139 LEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQCCSPDKESYRILMRGLCE 198

Query: 392 EGKIEEALGMLEKLWY----DGIYLNKASYRIVLNFSCQKGELEKAIELLRLML------ 441
           +G++ EA  +L  +++     G   + A+YR +L+  C  G +E+A+E+L  +L      
Sbjct: 199 DGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGHVEEALEILGKVLKKGLKA 258

Query: 442 ---CRGFLP-HYATS-----------NELLVRLCKAGMAEDAAIA--------------- 471
              CRG L   Y  +           NE L+R     MA  +A+A               
Sbjct: 259 PKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYSAMAIDLYSERKIGEANQV 318

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           L  + + GFKP    +   +  +CR   +  A +++ E ++++S
Sbjct: 319 LDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKVIKEEMVEDS 362



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 121/285 (42%), Gaps = 7/285 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL-MKHFSNCSLH 146
           QKG   + A Y T+LD L      E    +L ++  +  K  +    +L + +  N    
Sbjct: 218 QKGGGEDIAAYRTLLDALCDNGHVEEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDI 277

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           ER   + ++   I    PS+ + S     L    ++  A   L         KP+  I+ 
Sbjct: 278 ERTKGLINEAL-IRGGVPSMASYSAMAIDLYSERKIGEANQVLDEMRDR-GFKPSLSIYE 335

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
             I   C+ G +E A +V+KE        P +  Y+ ++ GLC+ G+   A+   E+M  
Sbjct: 336 AKIAALCRCGGVEEAVKVIKEEMVEDSCVPTVRLYNIVLKGLCREGKSAFAVGYLEKMAR 395

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +   + D  TY++L+DG C  G+   A  I+E M     +P V  Y TL+ G C  G+  
Sbjct: 396 QVGCVADKETYSILVDGLCCDGRFVEASGILERMLIRSSSPGVETYNTLIRGLCLMGRQY 455

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFC----RAGRVDEALELL 367
           +A    +EM      P    + +L+   C     AG   E LE L
Sbjct: 456 DAVIWLEEMVVQGKLPAVSVWDSLVASVCSNMTEAGVCSETLEKL 500


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 216/424 (50%), Gaps = 39/424 (9%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF+ N+ TY  +++ L +  +  A   VLRQ+        EG  +N     +N  ++  +
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQI--------EGKLVN-----TNVVMYSTI 199

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           ++                    C + L+       ++  +K      R+ P    F+ LI
Sbjct: 200 ID------------------GLCKDKLVTDAYGLYSEMIVK------RIPPTVVTFSSLI 235

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C  G  + AF +  EM    ++ P+  T++ L+D LCK G+ +EA  +   M+ K+ 
Sbjct: 236 YGFCIVGKFKDAFRLFNEMVMKNIN-PDAYTFNILVDALCKEGKIKEAKNVIAVMM-KEG 293

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + P  +TYN L+DG+C   +V +AK ++  +      PN  +Y  ++NGFCK   + EA 
Sbjct: 294 VEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEAL 353

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +F EM    + P  + Y +LI+  C+AGR+  A EL+ EM      ADIVT+N ++   
Sbjct: 354 CLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVF 413

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+   +++A+ +++K+   GI  N  +Y I+++  C+ G+L+ A ++ + +L +G+  + 
Sbjct: 414 CKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNA 473

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T N ++  LCK G+ ++A + L  + + G  P++ ++  +++ +    +   A +LL E
Sbjct: 474 WTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLRE 533

Query: 510 LVIK 513
           +VIK
Sbjct: 534 MVIK 537



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 177/358 (49%), Gaps = 17/358 (4%)

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
           F+++  I R+ PS+   +  L  LI++         L    +   +KP+    +ILI  +
Sbjct: 54  FNRMRQI-RQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCY 112

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           C  G +  AF V  ++ K                GLC NG+  EA+ LF + V       
Sbjct: 113 CHLGQMTFAFSVFAKILKM---------------GLCLNGKVNEAL-LFHDHVLALGFHL 156

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           + +TY +LI+G C+ G+   A +++  ++    N NV  Y+T+++G CK+  + +A  ++
Sbjct: 157 NHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLY 216

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            EM    + P  + +++LI  FC  G+  +A  L  EM  +    D  TFNI++  LC+E
Sbjct: 217 SEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKE 276

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           GKI+EA  ++  +  +G+     +Y  +++  C   E+ KA  +L ++      P+  + 
Sbjct: 277 GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSY 336

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           N ++   CK  M ++A      +   G  P   ++  L++ +C+  ++ +A+EL+DE+
Sbjct: 337 NIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 142/250 (56%), Gaps = 3/250 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++   +T ++     N+V  A++ L   ++ +R+ PN+  +NI+I   CK   ++ A 
Sbjct: 295 EPTVVTYNTLMDGYCLVNEVGKAKHVLSIISR-MRVAPNSRSYNIMINGFCKIKMVDEAL 353

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  EM    ++ P+ +TY++LIDGLCK GR   A EL +EM   + I  D +TYN LID
Sbjct: 354 CLFHEMCCRGIA-PHKVTYNSLIDGLCKAGRIPYAWELVDEM-HNNCIPADIVTYNSLID 411

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            FC+   VD+A  +++ +K +G  PN+  Y  L++G CK G+L+ A++VF ++       
Sbjct: 412 VFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNV 471

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +   Y  +IN  C+ G  DEA  LL +M++ G   D VT+  I+  L  + + E+A  +L
Sbjct: 472 NAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLL 531

Query: 403 EKLWYDGIYL 412
            ++   G+ +
Sbjct: 532 REMVIKGVVV 541



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 13/188 (6%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  TY +++D L +  +      ++ +M           + +L+  F      ++
Sbjct: 362 RGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDK 421

Query: 149 VLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP---NTC 203
            + +  KI  H I   +P++   +  ++ L +  Q+  AQ+      Q L +K    N  
Sbjct: 422 AIALVKKIKEHGI---QPNMCTYNILIDGLCKGGQLKNAQDVF----QDLLIKGYNVNAW 474

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +NI+I   CK G  + A  +L +M+ + +  P+ +TY T+I  L       +A +L  E
Sbjct: 475 TYNIMINGLCKEGLFDEAEVLLSKMEDNGI-IPDAVTYETIIQALFHKDENEKAQKLLRE 533

Query: 264 MVSKDQIL 271
           MV K  ++
Sbjct: 534 MVIKGVVV 541


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 174/315 (55%), Gaps = 4/315 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN  +++ +I   CK   +  A+++  EM   ++ +PN+ITY+TLI   C  G+   A 
Sbjct: 147 RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREI-FPNVITYNTLICAFCLAGQLMGAF 205

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L  EM+ K+ I PD  T+++LID  C+ GK   AK+I   M   G NPNV++Y  ++NG
Sbjct: 206 SLLHEMILKN-INPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMING 262

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK  ++ EA  +  EM +  + PDT+ Y +LI+  C++GR+  AL L+ EM  RG  AD
Sbjct: 263 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 322

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VT+  +L  LC+   +++A  +  K+   GI     +Y  +++  C+ G L+ A EL +
Sbjct: 323 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 382

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +L +G      T   ++  LCK GM ++A      + + G  P + ++ +++  +    
Sbjct: 383 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 442

Query: 499 KLLFAFELLDELVIK 513
           +   A +LL E++ K
Sbjct: 443 ENDKAEKLLHEMIAK 457



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 146/249 (58%), Gaps = 4/249 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   F+ILI   CK G  ++A ++   M +  ++ PN+ +Y+ +I+GLCK  R  EA
Sbjct: 216 INPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVN-PNVYSYNIMINGLCKCKRVDEA 272

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L  EM+ K+ + PD +TYN LIDG C+ G++  A  +M  M + G   +V  YT+L++
Sbjct: 273 MNLLREMLHKNMV-PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK   L +A  +F +MK   ++P    YT LI+  C+ GR+  A EL + +  +GC  
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ T+ +++ GLC+EG  +EAL +  K+  +G   N  ++ I++    +K E +KA +LL
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLL 451

Query: 438 RLMLCRGFL 446
             M+ +G L
Sbjct: 452 HEMIAKGLL 460



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 191/374 (51%), Gaps = 17/374 (4%)

Query: 90  GFNHNNATYATILDKLARYKKFEAV----DAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           G+  N  T+ T++  L    + + +    D V+ Q  ++T +   G  LN +        
Sbjct: 75  GYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQ-AFQTNQVSYGTLLNGLCKTGETRC 133

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCI 204
             ++L M          +P++   S  ++ L +   V+ A +   YS    R + PN   
Sbjct: 134 AIKLLRMIED----RSTRPNVVMYSAIIDGLCKDKLVNEAYDL--YSEMDAREIFPNVIT 187

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI   C  G L  AF +L EM    ++ P++ T+S LID LCK G+   A ++F  M
Sbjct: 188 YNTLICAFCLAGQLMGAFSLLHEMILKNIN-PDVYTFSILIDALCKEGK--NAKQIFHAM 244

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V    + P+  +YN++I+G C+  +VD A  ++  M +    P+   Y +L++G CK G+
Sbjct: 245 VQMG-VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A  + +EM +     D + YT+L++  C+   +D+A  L  +MKERG +  + T+  
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC+ G+++ A  + + L   G  ++  +Y ++++  C++G  ++A+ +   M   G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423

Query: 445 FLPHYATSNELLVR 458
            +P+ A + E+++R
Sbjct: 424 CIPN-AVTFEIIIR 436



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 145/276 (52%), Gaps = 3/276 (1%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           +I ++ ++  L K   +   I L ++M  K  I  + +T ++LI+ FC  G++  +  ++
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKG-IEQNLVTLSILINCFCHLGQMAFSFSLL 68

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             +   G  PN   +TTLM G C +G++++     D++     + + + Y TL+N  C+ 
Sbjct: 69  GKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKT 128

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G    A++LL+ +++R  + ++V ++ I+ GLC++  + EA  +  ++    I+ N  +Y
Sbjct: 129 GETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITY 188

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++   C  G+L  A  LL  M+ +   P   T + L+  LCK G  ++A      +V+
Sbjct: 189 NTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQ 246

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           MG  P   S+ +++  +C+ +++  A  LL E++ K
Sbjct: 247 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK 282



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 42/264 (15%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           KE + A +IF+ +  Q G N N  +Y  +++ L + K+ +    +LR+M           
Sbjct: 232 KEGKNAKQIFHAMV-QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM----------- 279

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
                       LH+ ++             P     ++ ++ L +S ++  A N +  +
Sbjct: 280 ------------LHKNMV-------------PDTVTYNSLIDGLCKSGRITSALNLM--N 312

Query: 193 NQHLRLKP-NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             H R +P +   +  L+   CK   L+ A  +  +MK+  +  P + TY+ LIDGLCK 
Sbjct: 313 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ-PTMYTYTALIDGLCKG 371

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR + A ELF+ ++ K   + D  TY V+I G C+ G  D A  I   M++NGC PN   
Sbjct: 372 GRLKNAQELFQHLLVKGCCI-DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVT 430

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEM 335
           +  ++    ++ +  +A+++  EM
Sbjct: 431 FEIIIRSLFEKDENDKAEKLLHEM 454



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 77/153 (50%), Gaps = 2/153 (1%)

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            + L K+M  +G + ++VT +I++   C  G++  +  +L K+   G   N  ++  ++ 
Sbjct: 29  VISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMK 88

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFK 481
             C KGE++K +     ++ + F  +  +   LL  LCK G     AI L  ++E    +
Sbjct: 89  GLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR-CAIKLLRMIEDRSTR 147

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           P    ++ +++ +C+ + +  A++L  E+  +E
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDARE 180


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 165/283 (58%), Gaps = 7/283 (2%)

Query: 173 LNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            N+L+ S     ++ LAQ+      +   L+P+   FN L+  + K G L   F +   M
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           + S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG C+ G
Sbjct: 198 QASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGHCKNG 255

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           +VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD I YT
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           TLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML ++   
Sbjct: 316 TLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           G+ L   +Y +++N  C+KG++    +L++ M   G++P   T
Sbjct: 376 GLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 163/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N L++G+ + G ++ 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLNE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G+LE A E  ++M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G K E  ++ +++   C+   +    +L+ E+
Sbjct: 370 REMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEM 407



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 148/248 (59%), Gaps = 5/248 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I+    DL + F LK + Q   ++P+   +++LI   CK   ++ A
Sbjct: 168 RPSVVSFNTLMNGYIKLG--DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM  + +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 226 NELFDEMLDNGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 283

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A+ +++ M   G  P+   YTTL++G CKEG L+ A E    M    ++
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIR 343

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K +I T+ +I+   C++G +     +
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKL 403

Query: 402 LEKLWYDG 409
           ++++  DG
Sbjct: 404 MKEMQRDG 411



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 36/204 (17%)

Query: 347 YTTLINCFCRAGRV-----------------------------------DEALELLKEMK 371
           +  L++ FC+ G +                                   +E   L   M+
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
             G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+ G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  ++  L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 492 ELICRGRKLLFAFELLDELVIKES 515
           +  C+   L  AFE   +++IKE+
Sbjct: 319 DGSCKEGDLETAFE-YRKIMIKEN 341



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 118/277 (42%), Gaps = 30/277 (10%)

Query: 251 NGRFREAIELFEEMVS---KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN- 306
           N  FR  ++ +  M+      Q+LP+A T   ++    R GK   +      ++  G   
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIV--VSRKGKDSASAVFAAILETRGTQR 63

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEV------------FDEMKNFLLKPDTIGYTTLINCF 354
            +++ ++ L+  + + G L++A E             FD  +  L     + Y  L+   
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLV--- 120

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
              G  +E+LE        G  A +  FNI++   C+EG+I  A  + + +   G+  + 
Sbjct: 121 --WGFYEESLEC-------GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            S+  ++N   + G+L +   L   M   G  P   T + L+  LCK    +DA      
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +++ G  P   ++  L++  C+  ++  A E+  +++
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 39/352 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           ++P+   + IL+   CK G +  A  VL  M +  +   P+++T +T++DGLCK+GR +E
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227

Query: 257 AIELFEE-MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           A+   E+ M S     P+ +TYN LID FCR G +  A +++E M+N G   N+    T+
Sbjct: 228 ALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTI 287

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLK---------------------------------- 341
           + G C+ G+   A E F E +    +                                  
Sbjct: 288 VGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 342 ---PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              PD I Y T+I+   +AGR+++A  +   MKE G K D   +NI++ G CR+ ++ EA
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             +L+++   GI  +  +Y  +L+ SC+ G+     ELL  M+  G  P   T   L+  
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            CK G  ++A   L  + E G  P +  +  L++ +C+   +  A EL DE+
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 183/364 (50%), Gaps = 46/364 (12%)

Query: 148 RVLEMFHKIHPITRE----KPSLKAISTCLNLLIESNQVDLAQNFL--KYSNQHLRLKPN 201
           RV +    +  ++R+    +P +  ++T ++ L +S +V  A  F+  + S+ H    PN
Sbjct: 187 RVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVH-GCPPN 245

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR-------F 254
           T  +N LI   C+ G +  A+E++++M+   +   N++T +T++ GLC+ GR       F
Sbjct: 246 TVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQ-NIVTLNTIVGGLCRAGRTGAALEFF 304

Query: 255 RE------------------------------AIELFEEMVSKDQILPDALTYNVLIDGF 284
           RE                              A+ELF E +S+    PDA+ Y  +I G 
Sbjct: 305 REKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHS-PDAIMYFTMISGL 363

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
            + G+++ A  +   MK  G   +   Y  L+ GFC++ +L EA E+  EMK   ++PD 
Sbjct: 364 TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             Y TL++  C+AG      ELL +M + GC+  ++TF  ++ G C+ GKI+EAL +L  
Sbjct: 424 CTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRS 483

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   GI+ N   Y  +++F C++G+++ AIEL   M  +    +  T N LL  L    M
Sbjct: 484 MDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNM 543

Query: 465 AEDA 468
            E A
Sbjct: 544 PEKA 547



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 165/351 (47%), Gaps = 8/351 (2%)

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           +S   G   N  TY  ++D   R         ++ +M  E    +      ++       
Sbjct: 236 MSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAG 295

Query: 145 LHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFL--KYSNQHLRLKPN 201
                LE F +   +  E K +    ST +  L+ +N V +A      K S  H    P+
Sbjct: 296 RTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH---SPD 352

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
             ++  +I    + G LE A  +   MK++     +   Y+ LI G C+  R  EA EL 
Sbjct: 353 AIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL-DTKAYNILIAGFCRKKRLHEAYELL 411

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           +EM  +  I PD  TYN L+ G C+ G      +++  M ++GC P+V  + TL++G+CK
Sbjct: 412 QEM-KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCK 470

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            GK+ EA  +   M    + P+ + Y TLI+  C+ G VD A+EL  EMKE+   A++ T
Sbjct: 471 VGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTT 530

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           FN +L GL  +   E+A  +++++  +  + +  +  +++ +    GE ++
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 180/404 (44%), Gaps = 48/404 (11%)

Query: 154 HKIHPITREKPSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
           H++ P     PS   +S  L+ LL   +  + A  FL  S       P+   FN ++   
Sbjct: 92  HRVPP-----PSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAAL 146

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QIL 271
            +   +     +   M+      P+++TY  L++GLCK GR  +A+ + + M  +D  I 
Sbjct: 147 ARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIR 206

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIME--FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           PD +T N ++DG C+ G+V  A   +E      +GC PN   Y  L++ FC+ G +  A 
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE--RGCKADIVTFNIILG 387
           E+ ++M+N  +  + +   T++   CRAGR   ALE  +E +      K + VT++ ++G
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 388 -----------------------------------GLCREGKIEEALGMLEKLWYDGIYL 412
                                              GL + G++E+A  M   +   G  L
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL 386

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y I++   C+K  L +A ELL+ M   G  P   T N LL   CKAG        L
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
             +++ G +P   ++  LV   C+  K+  A  +L  +   ESG
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM--DESG 488



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 2/183 (1%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + + ++P+ C +N L+   CK G   +  E+L +M       P++IT+ TL+ G CK G+
Sbjct: 415 KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ-PSVITFGTLVHGYCKVGK 473

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA+ +   M  +  I P+ + YN LID  C+ G VD A ++ + MK      NV  + 
Sbjct: 474 IDEALRILRSM-DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFN 532

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G   +   ++A E+ D+M+     PD +    L+      G  D     +++ +  
Sbjct: 533 ALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHT 592

Query: 374 GCK 376
             K
Sbjct: 593 ASK 595


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 170/305 (55%), Gaps = 3/305 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +  +N + +  +VD A  FLK    +   +PNT  +NI++K  C     E A E
Sbjct: 25  PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY-GCEPNTVSYNIVLKGLCTAERWEDAEE 83

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++ EM +     PN++T++ LI  LC+ G    A+E+ E+ + K    P++L+YN L+  
Sbjct: 84  LMGEMGQKGCP-PNVVTFNMLISFLCRKGLVEPALEVLEQ-IPKYGCTPNSLSYNPLLHA 141

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+  K+D+A   ++ M + GC P++ +Y TL+   C+ G++  A E+  ++K+    P 
Sbjct: 142 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 201

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y T+I+   +AG+  EALELL EM  +G + DI+T++ I  GLCRE +IE+A+    
Sbjct: 202 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 261

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+   GI  N   Y  ++   C++ E   AI+L   M+  G +P+ +T   L+  L   G
Sbjct: 262 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 321

Query: 464 MAEDA 468
           + ++A
Sbjct: 322 LIKEA 326



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 171/312 (54%), Gaps = 4/312 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+++   C+ G ++ A E LK +  S    PN ++Y+ ++ GLC   R+ +A E
Sbjct: 25  PDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAERWEDAEE 83

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  K    P+ +T+N+LI   CR G V+ A +++E +   GC PN  +Y  L++ F
Sbjct: 84  LMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 142

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ K+ +A    D M +    PD + Y TL+   CR+G VD A+ELL ++K++GC   +
Sbjct: 143 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 202

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++ GL + GK +EAL +L ++   G+  +  +Y  +    C++  +E AI     
Sbjct: 203 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 262

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGR 498
           +   G  P+    N +++ LCK      +AI LF  ++  G  P   ++ +L+E +    
Sbjct: 263 VQDMGIRPNTVLYNAIILGLCKR-RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 321

Query: 499 KLLFAFELLDEL 510
            +  A +LLDEL
Sbjct: 322 LIKEARDLLDEL 333



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 170/299 (56%), Gaps = 2/299 (0%)

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CKR   + A ++L EM+    + P+++TY+ +++G+C+ GR  +AIE  + + S     P
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCT-PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG-CEP 60

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           + ++YN+++ G C   + + A+++M  M   GC PNV  +  L++  C++G ++ A EV 
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           +++  +   P+++ Y  L++ FC+  ++D+A+  L  M  RGC  DIV++N +L  LCR 
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G+++ A+ +L +L   G      SY  V++   + G+ ++A+ELL  M+ +G  P   T 
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + +   LC+    EDA  A   + +MG +P +  +  ++  +C+ R+   A +L   ++
Sbjct: 241 STIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI 299



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 135/229 (58%)

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+     +A K+++ M++ GC P++  Y  ++NG C+EG++ +A E    + ++  +P+T
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + Y  ++   C A R ++A EL+ EM ++GC  ++VTFN+++  LCR+G +E AL +LE+
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G   N  SY  +L+  C++ +++KA+  L LM+ RG  P   + N LL  LC++G 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + A   L  L + G  P   S+  +++ + +  K   A ELL+E+V K
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 231



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 39/259 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKK----------------------------- 230
           PN   FN+LI   C++G +E A EVL+++ K                             
Sbjct: 95  PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 154

Query: 231 -----SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
                S+  YP++++Y+TL+  LC++G    A+EL  ++  K    P  ++YN +IDG  
Sbjct: 155 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG-CAPVLISYNTVIDGLT 213

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + GK   A +++  M + G  P++  Y+T+  G C+E ++++A   F ++++  ++P+T+
Sbjct: 214 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 273

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  +I   C+      A++L   M   GC  +  T+ I++ GL  EG I+EA  +L++L
Sbjct: 274 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333

Query: 406 WYDGIY----LNKASYRIV 420
              G+     +NK + R++
Sbjct: 334 CSRGVVRKSLINKGAIRLL 352



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 47/87 (54%)

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           +C++   ++A++LL  M  +G  P   T N ++  +C+ G  +DA   L  L   G +P 
Sbjct: 2   TCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 61

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
           + S+ ++++ +C   +   A EL+ E+
Sbjct: 62  TVSYNIVLKGLCTAERWEDAEELMGEM 88


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 203/425 (47%), Gaps = 39/425 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   N  TY  ++  + ++   E  DA+L +M     K              +   +  
Sbjct: 370 RGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK-------------PDTQTYNN 416

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           ++E + K    +R K          +LL E          +K SN    L P      ++
Sbjct: 417 MIEGYLKEQNTSRVK----------DLLSE----------MKKSN----LVPTAYTCGMI 452

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   C+ G++E A  V  E+  S    PN + Y+TLI G  + GRF+EA+ + + M  K 
Sbjct: 453 INGLCRHGSIEDASRVF-EIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM-DKK 510

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + PD L YN +I G C+  K++ AK  +  M   G  PNV+ Y  L++G+CK G++Q A
Sbjct: 511 GVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVA 570

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
              F EM    + P+ +  T LI+ +C+ G   EA  + + M  R    D+ T++ ++ G
Sbjct: 571 DRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHG 630

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           L R GK++ A+ +L +    G+  +  +Y  +++  C++G + KA +L   M  +G  P+
Sbjct: 631 LLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPN 690

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N L+  LCKAG  E A     G+   G    + ++A +++  C+   L  AF L D
Sbjct: 691 IITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFD 750

Query: 509 ELVIK 513
           E+ +K
Sbjct: 751 EMTLK 755



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N++I   C+ G ++ AFE+ K M K  +   ++ TYS LIDG  K  R  EA  
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGL-VADVFTYSILIDGFGKQKRCTEAKL 327

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + EEM SK  + P  + Y  LIDGF R G    A ++ E M   G   N+F Y  L+ G 
Sbjct: 328 MLEEMFSKG-LKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGV 386

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G +++A  + +EM    +KPDT  Y  +I  + +        +LL EMK+       
Sbjct: 387 CKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTA 446

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T  +I+ GLCR G IE+A  + E +   G+  N   Y  ++    Q+G  ++A+ +L++
Sbjct: 447 YTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKV 506

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +G  P     N +++ LCK+   E+A   L  ++E G KP   ++  L+   C+  +
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566

Query: 500 LLFAFELLDELV 511
           +  A     E++
Sbjct: 567 MQVADRYFKEML 578



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 219/468 (46%), Gaps = 49/468 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK----FHEGIFLNLMKHFSNCSL 145
           G   N   Y T++    +  +F+    +L+ M  +  +     +  + + L K       
Sbjct: 476 GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            + ++EM  +       KP++      ++   +S ++ +A  + K       + PN  + 
Sbjct: 536 KDYLVEMIER-----GLKPNVYTYGALIHGYCKSGEMQVADRYFK-EMLGCGIAPNDVVC 589

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI  +CK G+   A  + + M    + +P++ TYS LI GL +NG+ + A+EL  E +
Sbjct: 590 TALIDGYCKEGSTTEATSIFRCMLGRSV-HPDVRTYSALIHGLLRNGKLQGAMELLSEFL 648

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K  ++PD  TYN +I GFC+ G + +A ++ E+M   G +PN+  Y  L+NG CK G++
Sbjct: 649 EKG-LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF--- 382
           + A+E+FD +    L  + + Y T+I+ +C++G + +A  L  EM  +G   D   +   
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767

Query: 383 -------------------------------NIILGGLCREGKIEEALGMLEKLWYDGIY 411
                                          N ++ G C+ GK+ EA  +LE +    + 
Sbjct: 768 IDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVK 827

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            +  +Y I++++ C+ G L++A +    M  R  +P+  T   LL     AG   +   A
Sbjct: 828 PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSE-MFA 886

Query: 472 LFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           LF  ++    +P+  +W+++++   +    +   +L+D++ +K+ G +
Sbjct: 887 LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDM-LKKGGNV 933



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 158/321 (49%), Gaps = 36/321 (11%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            + PN   +N LI   CK G +E A E+   +    +++ N +TY+T+IDG CK+G   +A
Sbjct: 687  ISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH-NAVTYATIIDGYCKSGNLSKA 745

Query: 258  IELFEEMVSKDQILPDALTY----------------------------------NVLIDG 283
              LF+EM  K  + PD+  Y                                  N L+DG
Sbjct: 746  FRLFDEMTLKG-VPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDG 804

Query: 284  FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            FC+ GKV  A +++E M +    P+   YT L++  CK G L+EA++ F +M+   L P+
Sbjct: 805  FCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPN 864

Query: 344  TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
             + YT L++ +  AGR  E   L  EM  +  + D VT+++++    +EG   + L +++
Sbjct: 865  ALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVD 924

Query: 404  KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
             +   G  ++K    ++++  C+K  + + +++L  +  +G     AT + L+    KAG
Sbjct: 925  DMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAG 984

Query: 464  MAEDAAIALFGLVEMGFKPES 484
              + AA  L  +V   + P+S
Sbjct: 985  KMDGAARVLKSMVRFKWVPDS 1005



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 182/382 (47%), Gaps = 37/382 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P ++  S  ++ L+ + ++  A   L    +   L P+   +N +I   CK+G +  AF+
Sbjct: 619 PDVRTYSALIHGLLRNGKLQGAMELLSEFLEK-GLVPDVFTYNSIISGFCKQGGIGKAFQ 677

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + + M +  +S PN+ITY+ LI+GLCK G    A ELF+ +  K  +  +A+TY  +IDG
Sbjct: 678 LHEYMCQKGIS-PNIITYNALINGLCKAGEIERARELFDGIPGKG-LAHNAVTYATIIDG 735

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL---------------------------- 315
           +C+ G + +A ++ + M   G  P+ F Y+ L                            
Sbjct: 736 YCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAST 795

Query: 316 ------MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
                 M+GFCK GK+ EA ++ ++M +  +KPD + YT LI+  C+ G + EA +   +
Sbjct: 796 SSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVD 855

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M++R    + +T+  +L G    G+  E   + +++    I  +  ++ ++++   ++G+
Sbjct: 856 MQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGD 915

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
             K ++L+  ML +G        + L+  LC+     +    L  + E G      + + 
Sbjct: 916 HVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCST 975

Query: 490 LVELICRGRKLLFAFELLDELV 511
           LV    +  K+  A  +L  +V
Sbjct: 976 LVRCFHKAGKMDGAARVLKSMV 997



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 147/275 (53%), Gaps = 4/275 (1%)

Query: 183  DLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
            +L++ F  +    L+ + P++ +++ LI    K G  E A  +   ++  Q  + +  + 
Sbjct: 741  NLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF--LESVQKGFASTSSL 798

Query: 242  STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
            + L+DG CK+G+  EA +L E+MV K  + PD +TY +LID  C+ G +  A++    M+
Sbjct: 799  NALMDGFCKSGKVIEANQLLEDMVDK-HVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQ 857

Query: 302  NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                 PN   YT L++G+   G+  E   +FDEM    ++PD + ++ +I+   + G   
Sbjct: 858  KRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHV 917

Query: 362  EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            + L+L+ +M ++G        ++++  LCR+  + E L +LEK+   G+ L+ A+   ++
Sbjct: 918  KTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLV 977

Query: 422  NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
                + G+++ A  +L+ M+   ++P     N+L+
Sbjct: 978  RCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 1/272 (0%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           + +  LIDG  K G F EA+  F     ++  +   L  N L+    +  K++   +   
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLG-AKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN 225

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M       +V+ YT L+N   + G  +E K +  EM+     P  + Y  +I   CRAG
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            VDEA EL K M ++G  AD+ T++I++ G  ++ +  EA  MLE+++  G+     +Y 
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +++   ++G+  +A  +   ML RG   +  T N L+  +CK G  E A   L  ++ +
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G KP++ ++  ++E   + +      +LL E+
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 5/318 (1%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +F +LI  + K+G  + A       K++      L+  + L+  L K  +       +  
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVV-GLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+  + +L D  TY  LI+   R G     K+++  M+  GC+P++  Y  ++ G C+ G
Sbjct: 227 MLEAN-VLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++ EA E+   M    L  D   Y+ LI+ F +  R  EA  +L+EM  +G K   V + 
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G  R+G   EA  + E++   G+ LN  +Y  ++   C+ G++EKA  LL  M+  
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T N ++    K          L  + +    P + +  +++  +CR   +  A
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDA 465

Query: 504 ---FELLDELVIKESGTI 518
              FE++  L +K +  I
Sbjct: 466 SRVFEIMVSLGVKPNAVI 483



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 154/347 (44%), Gaps = 43/347 (12%)

Query: 60   ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
            I++ A I+ +    E + A E+F+ +   KG  HN  TYATI+D   +         +  
Sbjct: 692  ITYNALINGLCKAGEIERARELFDGIP-GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFD 750

Query: 120  QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
            +MT +       ++  L+         E+ L +F  +  + +   S  +++  ++   +S
Sbjct: 751  EMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF--LESVQKGFASTSSLNALMDGFCKS 808

Query: 180  NQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
             +V  A   L+   ++H+  KP+   + ILI +HCK G L+ A +   +M+K  +  PN 
Sbjct: 809  GKVIEANQLLEDMVDKHV--KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNL-MPNA 865

Query: 239  ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG--------------- 283
            +TY+ L+ G    GR  E   LF+EM++KD I PD +T++V+ID                
Sbjct: 866  LTYTALLSGYNMAGRRSEMFALFDEMIAKD-IEPDGVTWSVMIDAHLKEGDHVKTLKLVD 924

Query: 284  --------------------FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                                 CR   V    K++E ++  G N ++   +TL+  F K G
Sbjct: 925  DMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAG 984

Query: 324  KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            K+  A  V   M  F   PD+     LIN    +   + A + LK+M
Sbjct: 985  KMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 39/352 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           ++P+   + IL+   CK G +  A  VL  M +  +   P+++T +T++DGLCK+GR +E
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227

Query: 257 AIELFEE-MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           A+   E+ M S     P+ +TYN LID FCR G +  A +++E M+N G   N+    T+
Sbjct: 228 ALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTI 287

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLK---------------------------------- 341
           + G C+ G+   A E F E +    +                                  
Sbjct: 288 VGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 342 ---PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              PD I Y T+I+   +AGR+++A  +   MKE G K D   +NI++ G CR+ ++ EA
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             +L+++   GI  +  +Y  +L+ SC+ G+     ELL  M+  G  P   T   L+  
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            CK G  ++A   L  + E G  P +  +  L++ +C+   +  A EL DE+
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 183/364 (50%), Gaps = 46/364 (12%)

Query: 148 RVLEMFHKIHPITRE----KPSLKAISTCLNLLIESNQVDLAQNFL--KYSNQHLRLKPN 201
           RV +    +  ++R+    +P +  ++T ++ L +S +V  A  F+  + S+ H    PN
Sbjct: 187 RVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVH-GCPPN 245

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR-------F 254
           T  +N LI   C+ G +  A+E++++M+   +   N++T +T++ GLC+ GR       F
Sbjct: 246 TVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQ-NIVTLNTIVGGLCRAGRTGAALEFF 304

Query: 255 RE------------------------------AIELFEEMVSKDQILPDALTYNVLIDGF 284
           RE                              A+ELF E +S+    PDA+ Y  +I G 
Sbjct: 305 REKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHS-PDAIMYFTMISGL 363

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
            + G+++ A  +   MK  G   +   Y  L+ GFC++ +L EA E+  EMK   ++PD 
Sbjct: 364 TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             Y TL++  C+AG      ELL +M + GC+  ++TF  ++ G C+ GKI+EAL +L  
Sbjct: 424 CTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRS 483

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   GI+ N   Y  +++F C++G+++ AIEL   M  +    +  T N LL  L    M
Sbjct: 484 MDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNM 543

Query: 465 AEDA 468
            E A
Sbjct: 544 PEKA 547



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 180/404 (44%), Gaps = 48/404 (11%)

Query: 154 HKIHPITREKPSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
           H++ P     PS   +S  L+ LL   +  + A  FL  S       P+   FN ++   
Sbjct: 92  HRVPP-----PSAPLLSAILSKLLARFSSPEPAARFLAASLAAGAPAPDVFAFNSILAAL 146

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QIL 271
            +   +     +   M+      P+++TY  L++GLCK GR  +A+ + + M  +D  I 
Sbjct: 147 ARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIR 206

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIME--FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           PD +T N ++DG C+ G+V  A   +E      +GC PN   Y  L++ FC+ G +  A 
Sbjct: 207 PDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAY 266

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE--RGCKADIVTFNIILG 387
           E+ ++M+N  +  + +   T++   CRAGR   ALE  +E +      K + VT++ ++G
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVG 326

Query: 388 -----------------------------------GLCREGKIEEALGMLEKLWYDGIYL 412
                                              GL + G++E+A  M   +   G  L
Sbjct: 327 ALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKL 386

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y I++   C+K  L +A ELL+ M   G  P   T N LL   CKAG        L
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
             +++ G +P   ++  LV   C+  K+  A  +L  +   ESG
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM--DESG 488



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 41/205 (20%)

Query: 80  EIFNTVSEQK--GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E +  + E K  G   +  TY T+L    +   F AVD +L +M  + C+          
Sbjct: 406 EAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ---------- 455

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     PS+    T ++   +  ++D A   L+  ++   
Sbjct: 456 --------------------------PSVITFGTLVHGYCKVGKIDEALRILRSMDES-G 488

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  I+N LI   CKRG ++ A E+  EMK+  +   N+ T++ L+ GL       +A
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA-NVTTFNALLKGLRDKNMPEKA 547

Query: 258 IELFEEMVSKDQILPDALTYNVLID 282
            EL ++M  +++  PD +T +VL++
Sbjct: 548 FELMDQM-REERCFPDYVTVDVLME 571


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 165/320 (51%), Gaps = 7/320 (2%)

Query: 154 HKIHPITREKPSLKAISTCLNLLI---ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
           HK + I      + + STC ++L+   +  ++  A++ L Y      L  N   F +L+ 
Sbjct: 508 HKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLL-YKMIDKGLPVNKVAFTVLLD 566

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            + K G    A  +  EM+   +  P+ I +S  IDGL K G   EA E F EM SK   
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGIC-PDAIAFSAFIDGLSKAGLVEEAYEAFSEM-SKKGF 624

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +P+   YN LI G C  GK+  A K+   M+  G  P++F    ++NGFCKEG+++ A +
Sbjct: 625 VPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFD 684

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
            F EM +  + PDT+ Y TLI  +C+   +  A E L +M   G   DI T+NI + G C
Sbjct: 685 AFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFC 744

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
              KI  A+ ML++L   G+  N  +Y  ++N  C    L++A+ L   +L   F+P+  
Sbjct: 745 SSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVV 803

Query: 451 TSNELLVRLCKAGMAEDAAI 470
           T+N LL   CK GM E A I
Sbjct: 804 TTNVLLSHFCKQGMPEKALI 823



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 163/321 (50%), Gaps = 5/321 (1%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L  + Q+D A  FL+   +   + P+   FN +I  + + G  ++A +  K M    +  
Sbjct: 463 LCWAGQLDEAMQFLEDMLEK-GMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGL-V 520

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-DALTYNVLIDGFCRGGKVDRAK 294
           P+  T S+++ GL K GR +EA +L  +M+  D+ LP + + + VL+DG+ + G    A 
Sbjct: 521 PSSSTCSSMLLGLSKKGRLQEARDLLYKMI--DKGLPVNKVAFTVLLDGYFKVGDTAGAH 578

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            +   M+  G  P+   ++  ++G  K G ++EA E F EM      P+   Y +LI+  
Sbjct: 579 SLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGL 638

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C  G++ EAL+L +EM+++G   DI T NII+ G C+EG+++ A     ++ + G+  + 
Sbjct: 639 CNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDT 698

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  ++   C+  ++  A E L  M   G+ P   T N  +   C +     A   L  
Sbjct: 699 VTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDE 758

Query: 475 LVEMGFKPESDSWALLVELIC 495
           L+ +G  P + ++  ++  +C
Sbjct: 759 LIAVGVVPNTVTYNTMMNAVC 779



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 159/313 (50%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   FNIL+  + K G    ++E+ ++   S +  P+   Y   + GLC  G+  EA
Sbjct: 414 IAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSL-VPDCSLYDVSVAGLCWAGQLDEA 472

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++  E+M+ K  + P  + +N +I  + R G  D A K  + M   G  P+    ++++ 
Sbjct: 473 MQFLEDMLEKG-MPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLL 531

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  K+G+LQEA+++  +M +  L  + + +T L++ + + G    A  L  EM+ RG   
Sbjct: 532 GLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICP 591

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D + F+  + GL + G +EEA     ++   G   N   Y  +++  C  G+L +A++L 
Sbjct: 592 DAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLE 651

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R M  +G LP   T+N ++   CK G  + A  A   +  +G  P++ ++  L+   C+ 
Sbjct: 652 REMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKV 711

Query: 498 RKLLFAFELLDEL 510
             ++ A E L+++
Sbjct: 712 LDMVSADEFLNKM 724



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 177/363 (48%), Gaps = 8/363 (2%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           I   LM+ F N  +    LE+  ++  +   +PS  AIS    LL+           L+ 
Sbjct: 210 ILNTLMRGFMNSEMAYESLEILSRMREVG-VRPSSSAISILFRLLLRVGDYGSVWKLLR- 267

Query: 192 SNQHLRLKPNTCI--FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
               +R  P  C   FNI+I   C++G L  A  +L  M K     P++  Y+ LI+   
Sbjct: 268 --GMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCE-PDVYAYNILINAYR 324

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
             GR  +A+     M+ K+   P  +T++ +I  FC  G V  A+KI E ++  G +PNV
Sbjct: 325 IRGRTSDALGFLHLMI-KNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNV 383

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y TLM+G+ K   + +A  +++EM++  + PD   +  L+    + G+  ++ EL ++
Sbjct: 384 AMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRD 443

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
                   D   +++ + GLC  G+++EA+  LE +   G+  +  ++  V+    + G 
Sbjct: 444 WSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGF 503

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            + A +  ++ML  G +P  +T + +L+ L K G  ++A   L+ +++ G      ++ +
Sbjct: 504 EDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTV 563

Query: 490 LVE 492
           L++
Sbjct: 564 LLD 566



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 159/316 (50%), Gaps = 2/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P++   +IL +   + G   S +++L+ M +     P    ++ +I   C+ G  R A
Sbjct: 239 VRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDG-PRPCNHNFNIMILCFCQKGYLRVA 297

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L   M  K    PD   YN+LI+ +   G+   A   +  M  NGC P++  ++T++ 
Sbjct: 298 ESLLFVM-PKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIIT 356

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            FC EG + EA+++F+ ++   L P+   Y TL++ + +A  V +A  L +EM+++G   
Sbjct: 357 AFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAP 416

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  TFNI++ G  + GK  ++  +        +  + + Y + +   C  G+L++A++ L
Sbjct: 417 DGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFL 476

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             ML +G  P     N ++    +AG  ++A  A   ++  G  P S + + ++  + + 
Sbjct: 477 EDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKK 536

Query: 498 RKLLFAFELLDELVIK 513
            +L  A +LL +++ K
Sbjct: 537 GRLQEARDLLYKMIDK 552



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 112/206 (54%), Gaps = 3/206 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN  ++N LI   C  G L  A ++ +EM++  +  P++ T + +I+G CK GR + A +
Sbjct: 626 PNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGL-LPDIFTTNIIINGFCKEGRMKSAFD 684

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F EM     + PD +TYN LI G+C+   +  A + +  M  +G +P++  Y   + GF
Sbjct: 685 AFAEM-HHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGF 743

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C   K+  A  + DE+    + P+T+ Y T++N  C    +D A+ L  ++ +     ++
Sbjct: 744 CSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC-TDMLDRAMVLTAKLLKMAFVPNV 802

Query: 380 VTFNIILGGLCREGKIEEALGMLEKL 405
           VT N++L   C++G  E+AL   +KL
Sbjct: 803 VTTNVLLSHFCKQGMPEKALIWGQKL 828


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 203/394 (51%), Gaps = 20/394 (5%)

Query: 98  YATILDKLARYKKFEAVDAV--LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVL-EMFH 154
           +  ILD  A+ K +  V     L     +   F   I +N   H    +    VL ++  
Sbjct: 62  FNKILDSFAKMKHYSTVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 121

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNILIKHHC 213
           + +P     PS   ++T +  L    QV  A +F  K   Q  +L  N   +  LI   C
Sbjct: 122 RGYP-----PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL--NQVGYGTLINGVC 174

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G   +A ++LK++   +++ P+++ YST+ID LCK     EA  LF EM  K  I  D
Sbjct: 175 KIGDTRAAIKLLKKID-GRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKG-ISAD 232

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK---- 329
            +TYN LI GFC  GK+  A  ++  M     NP+V+ YT L++  CKEGK++EAK    
Sbjct: 233 VVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRIS 292

Query: 330 ---EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
              ++ DEM++     D I Y++LI+  C+ G +D A+ L  +MK++G + ++ TF I+L
Sbjct: 293 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILL 352

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL + G++++A  + + L   G +LN  +Y +++N  C++G LE+A+ +L  M   G +
Sbjct: 353 DGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI 412

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           P+  T   +++ L K    + A   L  ++  G 
Sbjct: 413 PNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 183/362 (50%), Gaps = 18/362 (4%)

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           MKH+S  SL  R+         +   +P L  ++  +N      Q+    + L    +  
Sbjct: 72  MKHYSTVSLSHRL--------ELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKR- 122

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
              P+T   N LIK  C +G ++ A     ++  +Q    N + Y TLI+G+CK G  R 
Sbjct: 123 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLL-AQGFQLNQVGYGTLINGVCKIGDTRA 181

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           AI+L +++  +    PD + Y+ +ID  C+   V  A  +   M   G + +V  Y TL+
Sbjct: 182 AIKLLKKIDGR-LTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLI 240

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA-------LELLKE 369
            GFC  GKL+EA  + + M    + PD   YT L++  C+ G+V EA        +L+ E
Sbjct: 241 YGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDE 300

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M++RG  AD++T++ ++ GLC+ G ++ A+ +  K+   GI  N  ++ I+L+   + G 
Sbjct: 301 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGR 360

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           L+ A E+ + +L +G+  +  T N ++   CK G+ E+A   L  + + G  P + ++  
Sbjct: 361 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 420

Query: 490 LV 491
           ++
Sbjct: 421 II 422



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 44/320 (13%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +I ++ ++D   K   +   + L   +  K  I PD  T N+LI+ FC  G++     
Sbjct: 57  PPIIQFNKILDSFAKMKHY-STVSLSHRLELKG-IQPDLFTLNILINCFCHMGQITFGFS 114

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   G  P+     TL+ G C +G++++A    D++     + + +GY TLIN  C
Sbjct: 115 VLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVC 174

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G    A++LLK++  R  K D+V ++ I+  LC+   + EA G+  ++   GI  +  
Sbjct: 175 KIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 234

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA------- 468
           +Y  ++   C  G+L++AI LL +M+ +   P   T   L+  LCK G  ++A       
Sbjct: 235 TYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYV 294

Query: 469 ----------------------------------AIALFG-LVEMGFKPESDSWALLVEL 493
                                             AIALF  + + G +P   ++ +L++ 
Sbjct: 295 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDG 354

Query: 494 ICRGRKLLFAFELLDELVIK 513
           + +G +L  A E+  +L+ K
Sbjct: 355 LWKGGRLKDAQEVFQDLLTK 374


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 224/487 (45%), Gaps = 42/487 (8%)

Query: 65  AISLIKCEKEPQCALEIFN-TVSEQKG---FNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           A S   C   P  A+ +FN   S  +G    +  + TYA ++D   R  + E   A   Q
Sbjct: 77  APSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQ 136

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           +     + +  I  +L+K F      +  L++     P     P + + S  L  L +  
Sbjct: 137 LLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196

Query: 181 QVDLAQNFLKYSNQHLRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +   A + L+   +   +  P+   ++ +I    K G +  A ++ KEM +  +  P+ +
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIP-PDFV 255

Query: 240 TYSTLIDGLCK-----------------------------------NGRFREAIELFEEM 264
           TYS+++  LCK                                    G+++EA+ +F+EM
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  ILPD +T ++L+   C+ GK+  A+ + + M   G NPNVF+YT ++NG+  +G 
Sbjct: 316 -RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGC 374

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +  ++FD M    + PD   +  LI  +   G +D+A+ +  EM++ G K D+VT+  
Sbjct: 375 LVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 434

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR GK+++A+    ++   G+  +K +Y  ++   C  G L KA EL+  ++  G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                   + ++  LCK G   DA       V +G  P +  +++L++  C   K+  A 
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKAL 554

Query: 505 ELLDELV 511
            + D +V
Sbjct: 555 RVFDAMV 561



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 216/475 (45%), Gaps = 76/475 (16%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY++++  L + +  +  +A LRQM  +    +   + NL+  +S+    +
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWK 306

Query: 148 RVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNF-----LKYSNQHL---- 196
             + +F ++  H I    P +  +S  +  L +  ++  A++      +K  N ++    
Sbjct: 307 EAVRVFKEMRRHSIL---PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYT 363

Query: 197 -------------------------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     + P+   FN+LIK +   G L+ A  +  EM+  
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  P+++TY T+I  LC+ G+  +A+E F +M+ +  + PD   Y+ LI GFC  G + 
Sbjct: 424 GVK-PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLL 481

Query: 292 RAKKIMEFMKNNG-----------------------------------CNPNVFNYTTLM 316
           +AK+++  + NNG                                    +P    Y+ LM
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+C  GK+++A  VFD M +  ++P+ + Y TL+N +C+ GR+DE L L +EM ++G K
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
              + +NII+ GL   G+   A     ++   GI +NK +Y IVL    +    ++AI L
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFL 661

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            + +       +  T N ++  + +    E+A      +   G  P   ++++++
Sbjct: 662 FKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 211/410 (51%), Gaps = 11/410 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+T++  KG N N  +Y  +L+  A       +  +   M  +        F  L+
Sbjct: 343 ARDVFDTMA-MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 401

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQ 194
           K ++NC + ++ + +F+++  H +   KP +    T +  L    ++D A + F +  +Q
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGV---KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            +   P+   ++ LI+  C  G+L  A E++ E+  + M + +++ +S++I+ LCK GR 
Sbjct: 459 GV--APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM-HLDIVFFSSIINNLCKLGRV 515

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  +F+  V+   + P A+ Y++L+DG+C  GK+++A ++ + M + G  PN   Y T
Sbjct: 516 MDAQNIFDLTVNVG-LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G++ E   +F EM    +KP TI Y  +I+    AGR   A     EM E G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +  T+NI+L GL +    +EA+ + ++L    + +N  +   ++    Q   +E+A 
Sbjct: 635 IAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK 694

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +L   +   G +P   T + ++  L K G+ E+A      +   G +P+S
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 169/396 (42%), Gaps = 42/396 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IFN + +  G   +  TY T++  L R  K +       QM  +     +  +  L+
Sbjct: 413 AMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQH 195
           + F  C+ H  +L+    I  I      L  +  S+ +N L +  +V  AQN    +  +
Sbjct: 472 QGF--CT-HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT-VN 527

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P   ++++L+  +C  G +E A  V   M  + +  PN + Y TL++G CK GR  
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE-PNDVVYGTLVNGYCKIGRID 586

Query: 256 EAIELFEEMVSKD--------QILPDAL--------------------------TYNVLI 281
           E + LF EM+ K          I+ D L                          TYN+++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G  +    D A  + + ++      N+    T++ G  +  +++EAK++F  +    L 
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  + Y+ +I    + G V+EA ++   M+  GC+ D    N ++  L ++ +I  A   
Sbjct: 707 PCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 766

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           L K+      L   +  ++++    KG   + I  L
Sbjct: 767 LSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF    S+ Q    + P + TY +L+D   R  + + A      +   G   N+   
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149

Query: 313 TTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             L+ GFC+  +  EA ++           PD   Y+ L+   C  G+  +A +LL+ M 
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 372 ERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           E G  C  D+V ++ ++ G  +EG + +A  + +++   GI  +  +Y  V++  C+   
Sbjct: 210 EGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           ++KA   LR M+ +G LP+  T N L+      G  ++A      +      P+  + ++
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A ++ D + +K
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMK 353


>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
 gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
          Length = 534

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 208/441 (47%), Gaps = 23/441 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSE-----QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM- 121
           L++ E++P+ AL IF+  +            + AT + +  +LA         ++L +  
Sbjct: 23  LVRAERDPRRALAIFDAATAASTSAPDPITPSPATVSLLTSRLASAGHLPLATSLLSRSR 82

Query: 122 -TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
             + +    E  FL L++ FS        L +F           S ++ +  L  L+  +
Sbjct: 83  GVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAALVAHS 142

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT--LESAFEVLKEMKKSQMSYPNL 238
            + LA++ L    +     P    +N+L+K  C      ++ A  + + + K     P++
Sbjct: 143 HLPLARSLLA-DMRAAGFAPTAATYNVLLKAQCSDAAADIKDALRLFRNIPK-----PDV 196

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
            +Y+T+IDGLC+ GR   A+E+F EMV K  I P  +TY  LI    R G  D A KI +
Sbjct: 197 CSYNTIIDGLCRRGRLAAALEMFSEMVGK-CIAPTVVTYTTLIHWLAREGCFDDALKIFD 255

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M   G +PN+  Y++L++G CK G+   A E+ D M      P+TI Y+++I+  C+  
Sbjct: 256 EMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEH 315

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            + EA+E+L  M+ +G K D   F  ++ GLC  G+  EA   L+++   GI  N+ ++ 
Sbjct: 316 MLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMILAGIEPNRVTWS 375

Query: 419 I-------VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
           +       VL   C KGEL +A ++ +    R       T + L+    K    E AA  
Sbjct: 376 LHTRINNTVLTALCAKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSKKKNMEKAAHV 435

Query: 472 LFGLVEMGFKPESDSWALLVE 492
           +  ++     PE ++W +++ 
Sbjct: 436 VLDMLSERCIPERETWDVIIS 456



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 15/322 (4%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT----YSTLIDGLCKNGR 253
           + P+    ++L       G L  A  +L    +S+  +P++      +  L+    +  R
Sbjct: 51  ITPSPATVSLLTSRLASAGHLPLATSLLS---RSRGVFPSVAALEPPFLGLLRAFSRTHR 107

Query: 254 FREAIELFEEMVSKDQILP-DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              A+ LF    S D  LP  A +YN ++        +  A+ ++  M+  G  P    Y
Sbjct: 108 PLAALHLFRSAPS-DLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATY 166

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNF--LLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
             L+   C +     A ++ D ++ F  + KPD   Y T+I+  CR GR+  ALE+  EM
Sbjct: 167 NVLLKAQCSDA----AADIKDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAAALEMFSEM 222

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             +     +VT+  ++  L REG  ++AL + +++   G+  N  +Y  +++  C+ G  
Sbjct: 223 VGKCIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRA 282

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+EL+  M+    LP+  T + ++  LCK  M  +A   L  +   G KP++  +  L
Sbjct: 283 ASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKL 342

Query: 491 VELICRGRKLLFAFELLDELVI 512
           +  +C   + + A   LDE+++
Sbjct: 343 IVGLCDAGRAVEAANYLDEMIL 364



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 11/180 (6%)

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT----FNIILGGLCREGKI 395
           + P     + L +    AG +  A  LL   + RG    +      F  +L    R  + 
Sbjct: 51  ITPSPATVSLLTSRLASAGHLPLATSLLS--RSRGVFPSVAALEPPFLGLLRAFSRTHRP 108

Query: 396 EEALGMLEKLWYDGIYLNKA-SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
             AL +      D    + A SY  VL        L  A  LL  M   GF P  AT N 
Sbjct: 109 LAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNV 168

Query: 455 LLVRLCKAGMAE-DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           LL   C    A+   A+ LF  +    KP+  S+  +++ +CR  +L  A E+  E+V K
Sbjct: 169 LLKAQCSDAAADIKDALRLFRNIP---KPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGK 225


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 175/346 (50%), Gaps = 37/346 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I  H K G LE+ F +  +M    +  PN ITY+ L+ GLC+ GR  E   
Sbjct: 48  PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLK-PNAITYNVLLSGLCRAGRMGETSA 106

Query: 260 LFEEMVSKDQILPDALTYNVLIDGF----------------------------------- 284
           L +EM S+ +++PD  TY++L DG                                    
Sbjct: 107 LLDEMASQ-KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGL 165

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ GKV  A+++++ + N G  P    Y TL+NG+C+ G+L+ A   F +MK+  +KPD 
Sbjct: 166 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 225

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I Y  LIN  C+A R+  A +LL EM++ G    + TFN ++    R G++E+   +L +
Sbjct: 226 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 285

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +  +G+  N  SY  ++N  C+ G++ +A+ +L  M  +  LP+    N ++    + G 
Sbjct: 286 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 345

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + A I +  +   G  P   ++ LL++ +C   ++  A E+++ L
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 391



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 210/428 (49%), Gaps = 8/428 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY  +L  L R  +     A+L +M  +        +  L    S     + +
Sbjct: 80  GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 139

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           L +F K   + +T    +    S  LN L +  +V +A+  L+ S  +  L P   I+N 
Sbjct: 140 LSLFGKYLKNGVTIGDYTC---SILLNGLCKDGKVSIAEEVLQ-SLVNAGLVPTRVIYNT 195

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +C+ G LE AF    +MK   +  P+ ITY+ LI+GLCK  R   A +L  EM   
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIK-PDHITYNALINGLCKAERITNAQDLLMEM-QD 253

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + P   T+N LID + R G++++   ++  M+ NG  PNV +Y +++N FCK GK+ E
Sbjct: 254 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 313

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  + D+M +  + P+   Y  +I+ +   G  D+A  L+++MK  G    IVT+N+++ 
Sbjct: 314 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 373

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC + +I EA  ++  L    +  +  SY  +++  C +G ++KA++L + M   G   
Sbjct: 374 GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS 433

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T ++L+  L  AG   +       +++    P +    ++VE   +    + A +L 
Sbjct: 434 TVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 493

Query: 508 DELVIKES 515
            E++ K +
Sbjct: 494 KEMLQKRN 501



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 151/293 (51%), Gaps = 3/293 (1%)

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L+ M +     PN  +Y+ +I G+ + GR  +A+E+F+EM  +  +LP+ +TYN +IDG
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTER-AVLPNHITYNTMIDG 59

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             +GG ++   ++ + M  +G  PN   Y  L++G C+ G++ E   + DEM +  + PD
Sbjct: 60  HIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y+ L +   R G     L L  +  + G      T +I+L GLC++GK+  A  +L+
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            L   G+   +  Y  ++N  CQ GELE A      M  R   P + T N L+  LCKA 
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
              +A   L  + + G  P  +++  L++   R  +L   F +L E+  +E+G
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM--QENG 290


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 154/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 156 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ-PDVYTYSVLINGLCKESKMDDA 214

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 215 NELFDEMLDKG-LVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 273

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD I YTTLI+  C+ G ++ A E  K M +   + 
Sbjct: 274 GLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRL 333

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  +L ++   G+  +  +Y +++N  C+KG++    +LL
Sbjct: 334 DDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLL 393

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 394 KEMQRDGHVPSVVTYNVLM 412



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F   ++K  + P  +++N L++G+ R G +D 
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNA-ITKWGLRPSVVSFNTLMNGYIRLGDLDE 178

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 179 GFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLID 238

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C++GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 239 GHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 298

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+LE A E  + M+             L+  LC+ G   DA   L
Sbjct: 299 DKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVL 358

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++  G KP++ ++ +++   C+   +    +LL E+
Sbjct: 359 REMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F   S  H   ++P+   +++LI   CK   ++ A
Sbjct: 157 RPSVVSFNTLMNGYIRLG--DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 214

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CK+GR   A+E++++M+S+  + PD +TYN LI
Sbjct: 215 NELFDEMLDKGL-VPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 272

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L+ A E    M    ++
Sbjct: 273 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIR 332

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G +     +
Sbjct: 333 LDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKL 392

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 393 LKEMQRDGHVPSVVTYNVLMN 413



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 192 QPDVYTYSVLINGLCKESKMDDANELF---DEMLDKGLVPNGVTFTTLIDGHCKSGRVDL 248

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TLI GLCK G  ++A +L +EM  K  + PD +TY  L
Sbjct: 249 AMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG-LKPDKITYTTL 306

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G ++ A +  + M       +   YT L++G C+EG+  +A++V  EM +  L
Sbjct: 307 IDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGL 366

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPDT  YT +IN FC+ G V    +LLKEM+  G    +VT+N+++ G
Sbjct: 367 KPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 1   TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E M                   G
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECG 120

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCKEG ++ A+ VF+ +  + L+P  + + TL+N + R G +DE  
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 240

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 241 CKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 301 ITYTTLIDGCCKEGDLETAFE 321



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 129/299 (43%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 34  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVP-- 89

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E M           Y  L+ GF            ++E
Sbjct: 90  ---------------FDTCRKVLEHMMK-------LKYFKLVWGF------------YEE 115

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V+FN ++ G  R G 
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGD 175

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T   
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 235

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK+G  + A      ++     P+  ++  L+  +C+   L  A +L+DE+ +K
Sbjct: 236 LIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK 294


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 225/446 (50%), Gaps = 18/446 (4%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P  A +IFN + ++  +  N  T  T+++ L RY    ++  + RQ+  ++ K   G+ 
Sbjct: 155 QPHLATQIFNKM-KRLNYRPNLLTCNTLMNSLVRYPSSSSI-LLARQVLKDSIKL--GVV 210

Query: 134 LNLMKH----FSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQN 187
            N        +  C L  +V +    ++ ++     P   + +T L+ L++   +  A++
Sbjct: 211 PNTNSFNILIYGYC-LESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARD 269

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            L    +   L PN   +N+L+  +C+ G L+ A +V++ M ++ +  P + TY+ L++G
Sbjct: 270 LL-LDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNL-LPTVWTYNMLVNG 327

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C +G+  EA  + +EM  K  +LPD +TYN LIDG  +         ++E M   G   
Sbjct: 328 FCNDGKIDEAFRIRDEM-EKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKC 386

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N   Y  ++   CK+G + EA    D+M+   L PD + Y TLI  +C+AG++ +A  ++
Sbjct: 387 NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMM 446

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL--NFSC 425
            EM  +G K D  T N IL  LC E K++EA  +L      G  L++ SY I++   F  
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD 506

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           +KG  ++A+ L   M  R  +P   T N ++  LC++   + A   L  ++E G  P+  
Sbjct: 507 EKG--DRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDET 564

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           ++ +++   C    +  AF+  +E++
Sbjct: 565 TYNIIIHGFCLEGNVEKAFQFHNEMI 590



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 171/326 (52%), Gaps = 12/326 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K N   +NI++K  CK+G +  A   L +M+++ +S P+ +TY+TLI   CK G+  +A
Sbjct: 384 VKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLS-PDCVTYNTLIGAYCKAGKMGKA 442

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + +EM SK   + D  T N ++   C   K+D A  ++      G   +  +Y  L+ 
Sbjct: 443 FRMMDEMTSKGLKI-DTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILIL 501

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+ K+ K   A  ++DEMK   + P TI Y ++I   C++ +VD+A++ L EM E G   
Sbjct: 502 GYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP 561

Query: 378 DIVTFNIILGGLCREGKIEEALG----MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           D  T+NII+ G C EG +E+A      M+E L+   +Y    +  I+L   C++G LEKA
Sbjct: 562 DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVY----TCNILLRGLCREGMLEKA 617

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           ++L   ++ +G      T N ++  LCK G  E+A   L  +      P+  ++ +++  
Sbjct: 618 LKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677

Query: 494 ICRGRKLLFAFELLDELVIKESGTIQ 519
           +    ++  A E   ++V  ESG + 
Sbjct: 678 LTDAGRIKEAEEFTLKMV--ESGIVH 701



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 162/321 (50%), Gaps = 11/321 (3%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREA 257
           +P+  + +  I  + +      A ++  +MK+  ++Y PNL+T +TL++ L    R+  +
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKR--LNYRPNLLTCNTLMNSLV---RYPSS 191

Query: 258 IE-LFEEMVSKDQI----LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
              L    V KD I    +P+  ++N+LI G+C   KV  A   +  M   GC P+  +Y
Sbjct: 192 SSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSY 251

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            T+++   K   LQEA+++  +MK+  L P+   Y  L+  +CR G + EA ++++ M  
Sbjct: 252 NTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTR 311

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
                 + T+N+++ G C +GKI+EA  + +++    +  +  +Y  +++   Q  +  +
Sbjct: 312 NNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSE 371

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
              L+  M  +G   +  T N +L  +CK G   +A   L  + E G  P+  ++  L+ 
Sbjct: 372 VYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIG 431

Query: 493 LICRGRKLLFAFELLDELVIK 513
             C+  K+  AF ++DE+  K
Sbjct: 432 AYCKAGKMGKAFRMMDEMTSK 452



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 25/244 (10%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ P+T  +N +I   C+   ++ A + L EM ++ +  P+  TY+ +I G C  G   +
Sbjct: 523 QIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGL-VPDETTYNIIIHGFCLEGNVEK 581

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A +   EM+ ++   PD  T N+L+ G CR G +++A K+   + + G + +V  Y T++
Sbjct: 582 AFQFHNEMI-ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTII 640

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +  CKEGK + A ++  EM+   L PD   Y  +I     AGR+ EA E   +M E G  
Sbjct: 641 SSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIV 700

Query: 377 AD-----------------------IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            D                        + ++  +  LC + K ++A+ +  ++  +G+ LN
Sbjct: 701 HDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALN 760

Query: 414 KASY 417
           K +Y
Sbjct: 761 KYTY 764


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 152/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 169 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 227

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 228 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIY 286

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +     
Sbjct: 287 GLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXL 346

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  N  +Y +++N  C+KG++ K  +LL
Sbjct: 347 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLL 406

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 407 KEMQRDGHVPSVVTYNVLM 425



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 191

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 192 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 251

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 252 GHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKP 311

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 312 DKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKML 371

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP   ++ +++   C+   +    +LL E+
Sbjct: 372 REMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEM 409



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 170 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 227

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E+++ M+S+  +LPD +TYN LI
Sbjct: 228 NELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQ-SLLPDLITYNTLI 285

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M    + 
Sbjct: 286 YGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIX 345

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K +  T+ +I+   C++G + +   +
Sbjct: 346 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKL 405

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 406 LKEMQRDGHVPSVVTYNVLMN 426



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 205 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 261

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K M  SQ   P+LITY+TLI GLCK G  ++A  L +EM S   + PD +TY  L
Sbjct: 262 AMEIYKRML-SQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEM-SMKGLKPDKITYTTL 319

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 320 IDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 379

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KP+   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 380 KPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 83/167 (49%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G ++E   +   + 
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T   L+   CK G  +
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            A      ++     P+  ++  L+  +C+   L  A  L+DE+ +K
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 307



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 117/288 (40%), Gaps = 44/288 (15%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
            L +Y T+I  LC +    EA  L + +VS                   R GK   +   
Sbjct: 14  TLHSYCTMIHFLCTHQMLSEAKXLIQVVVS-------------------RKGKGSASAVF 54

Query: 297 MEFMKNNGCN-PNVFNYTTLMNGFCKEGKLQEAKEVFDEMK--NFLLKPDTIGYTTLINC 353
              ++  G    ++F ++ L+  + +   L++A E +   +   F +  DT         
Sbjct: 55  AAILETKGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDT--------- 105

Query: 354 FCRAGRVDEALELLKEMK----------ERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            CR  +V E L  LK  K          E G  A +  FNI++   C++G I  A  + +
Sbjct: 106 -CR--KVLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 162

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G+  +  SY  ++N   + G+L++   L   ML  G  P   T + L+  LCK  
Sbjct: 163 AITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKES 222

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             +DA      ++  G  P   ++  L++  C+  ++  A E+   ++
Sbjct: 223 KMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRML 270


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 175/315 (55%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           K +   +N LI   CK G +E+A+     MK+  +   N++T+ST +D  CK G  REA+
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGV-MANVVTFSTFVDAFCKEGLVREAM 313

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF +M  +   L +  TY  LIDG C+ G++D A  +++ M   G   NV  YT L++G
Sbjct: 314 KLFAQMRVRGMAL-NEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKE K+ EA++V   M+   ++ + + YTTLI+        ++AL LL EMK +G + D
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           I  +  ++ GLC   K++EA  +L K+   G+  N   Y  +++   + G++ +AI +L+
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +L  GF P+  T   L+  LCKAG  ++A      + ++G  P   ++  LV+ +C+  
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552

Query: 499 KLLFAFELLDELVIK 513
            L  A +L +E+V K
Sbjct: 553 CLNEAVQLFNEMVHK 567



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 169/333 (50%), Gaps = 37/333 (11%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FNI+I   CK G L  A  +   MK+     P+++T+++LIDG  K G   E  +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG-CLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L EEM  +     D +TYN LI+ FC+ G+++ A      MK  G   NV  ++T ++ F
Sbjct: 245 LVEEM-RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG ++EA ++F +M+   +  +   YT LI+  C+AGR+D+A+ LL EM  +G   ++
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 380 VTFNIILGGLCREGKI-----------------------------------EEALGMLEK 404
           VT+ +++ GLC+E K+                                   E+ALG+L +
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+ L+ + Y  ++   C   +L++A  LL  M   G  P+Y     ++    K+G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +A   L  +++ GF+P   ++  L++ +C+ 
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKA 516



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 153/311 (49%), Gaps = 2/311 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   F+  +   CK G +  A ++  +M+   M+  N  TY+ LIDG CK GR  +AI L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMAL-NEFTYTCLIDGTCKAGRLDDAIVL 350

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EMV +   L + +TY VL+DG C+  KV  A+ ++  M+  G   N   YTTL++G  
Sbjct: 351 LDEMVRQGVPL-NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
                ++A  +  EMKN  L+ D   Y  LI   C   ++DEA  LL +M E G + + +
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +  ++    + GK+ EA+ ML+K+   G   N  +Y  +++  C+ G +++AI     M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G  P+      L+  LCK G   +A      +V  G   +   +  L++   +   L
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 501 LFAFELLDELV 511
             AF L  +++
Sbjct: 590 HDAFALKAKMI 600



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 143/258 (55%), Gaps = 6/258 (2%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           + + L+     RG L+ A   +  +++ ++  PN  T + ++  L ++   R    LFE+
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVP-PNTRTCNHILLRLARDRSGRLVRRLFEQ 182

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           + +     P+  T+N++ID  C+ G++  A+ +   MK  GC P+V  + +L++G+ K G
Sbjct: 183 LPA-----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +L E +++ +EM+    K D + Y  LINCFC+ GR++ A      MK  G  A++VTF+
Sbjct: 238 ELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFS 297

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
             +   C+EG + EA+ +  ++   G+ LN+ +Y  +++ +C+ G L+ AI LL  M+ +
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 444 GFLPHYATSNELLVRLCK 461
           G   +  T   L+  LCK
Sbjct: 358 GVPLNVVTYTVLVDGLCK 375



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 169/350 (48%), Gaps = 41/350 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-HFSNCSLH 146
           ++G   N  TY  ++D L + +K    + VLR M     + +E ++  L+  HF N    
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN---- 411

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
                           K S KA    L LL E              N+ L L  +  ++ 
Sbjct: 412 ----------------KNSEKA----LGLLSE------------MKNKGLEL--DISLYG 437

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI+  C    L+ A  +L +M +S +  PN I Y+T++D   K+G+  EAI + ++++ 
Sbjct: 438 ALIQGLCNVHKLDEAKSLLTKMDESGLE-PNYIIYTTMMDACFKSGKVPEAIAMLQKILD 496

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                P+ +TY  LIDG C+ G +D A      M++ G +PNV  YT L++G CK G L 
Sbjct: 497 SG-FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++F+EM +  +  D + YT L++ + + G + +A  L  +M + G + D+  +   +
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            G C    + EA  +  ++   GI  ++A Y  +++   + G LE+AI L
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 177/384 (46%), Gaps = 8/384 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   N  T++T +D   +         +  QM       +E  +  L+         
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG-- 342

Query: 147 ERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            R+ +    +  + R+   L  ++    ++ L +  +V  A++ L+   +   ++ N  +
Sbjct: 343 -RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA-GVRANELL 400

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI  H      E A  +L EMK   +   ++  Y  LI GLC   +  EA  L  +M
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLEL-DISLYGALIQGLCNVHKLDEAKSLLTKM 459

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  + P+ + Y  ++D   + GKV  A  +++ + ++G  PNV  Y  L++G CK G 
Sbjct: 460 -DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA   F++M++  L P+   YT L++  C+ G ++EA++L  EM  +G   D V +  
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L G  ++G + +A  +  K+   G+ L+   Y   ++  C    + +A E+   M+  G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638

Query: 445 FLPHYATSNELLVRLCKAGMAEDA 468
             P  A  N L+ +  K G  E+A
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEA 662



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 41/234 (17%)

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL++     G L +A      ++   + P+T    T  +   R  R D +  L++ + E+
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNT---RTCNHILLRLAR-DRSGRLVRRLFEQ 182

Query: 374 GCKADIVTFNIILGGLCREGKIEEA---------LG------------------------ 400
               ++ TFNI++  LC+EG++ EA         +G                        
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 401 --MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             ++E++   G   +  +Y  ++N  C+ G +E A      M   G + +  T +  +  
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 459 LCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            CK G+  + A+ LF  + + G      ++  L++  C+  +L  A  LLDE+V
Sbjct: 303 FCKEGLVRE-AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 173/316 (54%), Gaps = 2/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   ++ LI+ +CK   LESA +V++EM+++  S  N++TY+TLI GLC+ G   EA
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSL-NVVTYNTLIGGLCRAGAIEEA 297

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
               +EM     ++PD  TY  +I+G C+ G+ D+AK +++ M   G  PNV  Y+TL++
Sbjct: 298 FGYKKEM-EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLID 356

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF ++G   EA ++  EM    ++P+ I Y  LI   C+ GR+  A  +LK+M + G  A
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMA 416

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D +T+N+++ G  R+   EEA  +L ++   GI  N  +Y I++N  CQ GE E+A  LL
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLL 476

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G  P+      L+   C+ G    A   L  +      P+   +  L+  +   
Sbjct: 477 EQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV 536

Query: 498 RKLLFAFELLDELVIK 513
            K+  A E  DE++ K
Sbjct: 537 GKMDEAIEYYDEMLEK 552



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 2/311 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N LI   C+ G +E AF   KEM+   +  P+  TY  +I+GLCK GR  +A  L
Sbjct: 277 NVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGL-VPDGFTYGAIINGLCKRGRPDQAKCL 335

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM S   ++P+ + Y+ LIDGF R G  D A KI++ M   G  PN   Y  L+ G C
Sbjct: 336 LDEM-SCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLC 394

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G++  A  +  +M       DT+ Y  +I    R    +EA  LL EM++ G   ++ 
Sbjct: 395 KLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVY 454

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++II+ GLC+ G+ E A G+LE++  DG+  N   Y  +++  C++G    A E L+ M
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                 P     N L++ L   G  ++A      ++E GF+P   ++  L+        L
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNL 574

Query: 501 LFAFELLDELV 511
             A +LL +++
Sbjct: 575 EKAEQLLHQML 585



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 205/462 (44%), Gaps = 39/462 (8%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G + +  TY+T+++   + +  E+   V+ +M    C  +   +  L+         
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E     + K        P        +N L +  + D A+  L        L PN  +++
Sbjct: 295 EEAFG-YKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLD-EMSCAGLMPNVVVYS 352

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM-- 264
            LI    ++G  + AF+++KEM  + +  PN ITY  LI GLCK GR   A  + ++M  
Sbjct: 353 TLIDGFMRQGNADEAFKIVKEMSAAGVQ-PNKITYDNLIRGLCKLGRMGRASRILKQMTK 411

Query: 265 --------------------------------VSKDQILPDALTYNVLIDGFCRGGKVDR 292
                                           + K  I P+  TY+++I+G C+ G+ +R
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A  ++E M  +G  PN F Y  L++G+C+EG    A E   +M    L PD   Y +LI 
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLII 531

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
                G++DEA+E   EM E+G + +  T+  ++ G    G +E+A  +L ++   G+  
Sbjct: 532 GLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNP 591

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N   Y  +L    +   LEK    L+ ML +G +P       ++  L  +G  + AA+++
Sbjct: 592 NDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQ-AAVSV 650

Query: 473 FGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++E  G  P+S  +  L+   C+   +  A  LLDE+  K
Sbjct: 651 LSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK 692



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 213/456 (46%), Gaps = 37/456 (8%)

Query: 78  ALEIFNTVSEQK--GFNHNNATYATILDKLARYKKFEAVDAVLRQMT-----YETCKFHE 130
           A E F  V E    G   N  TY  ++  L +  +      +L+QMT      +T  ++ 
Sbjct: 364 ADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNL 423

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNF 188
            I  +L +H           E F  ++ + +    P++   S  +N L +  + + A   
Sbjct: 424 VIEGHLRQHNKE--------EAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGL 475

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+       LKPN  ++  LI  +C+ G+   A E LK+M +  ++ P+L  Y++LI GL
Sbjct: 476 LEQMIAD-GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT-PDLYCYNSLIIGL 533

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
              G+  EAIE ++EM+ K    P+  TY  LI G+   G +++A++++  M N+G NPN
Sbjct: 534 SNVGKMDEAIEYYDEMLEKG-FQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPN 592

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
            F Y  ++ G+ K   L++       M    L PD   Y  +I+    +G +  A+ +L 
Sbjct: 593 DFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLS 652

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            +++ G   D + +  ++ G C+   +E+A+G+L+++   GI    + Y  +++  C+  
Sbjct: 653 VIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSD 712

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           ++  A  +   ++C+G  P+  T   L+   CKAG   DA      ++  G  P++  ++
Sbjct: 713 DISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYS 772

Query: 489 LLV-----------------ELICRGRKLLFAFELL 507
           +L                  E+I RG  ++ +F  L
Sbjct: 773 VLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTL 808



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 199/419 (47%), Gaps = 46/419 (10%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G + N  TY+ I++ L +  + E    +L QM  +  K +  ++  L+  +       
Sbjct: 446 KGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFS 505

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLR--LKPNTCI 204
              E   K+   TRE  +L     C N L+I  + V      ++Y ++ L    +PN   
Sbjct: 506 LACETLKKM---TRE--NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFT 560

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG----------------- 247
           +  LI  +   G LE A ++L +M  S ++ PN   Y+ +++G                 
Sbjct: 561 YGGLIHGYSMAGNLEKAEQLLHQMLNSGLN-PNDFIYAQILEGYFKSDNLEKVSSTLKSM 619

Query: 248 ------------------LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
                             L  +G  + A+ +   ++ K+ ++PD+L Y  LI GFC+   
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLS-VIEKNGLVPDSLIYGSLISGFCKAAD 678

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +++A  +++ M   G  P +  Y  L++GFCK   +  A+ +F+ +    L P+ + YTT
Sbjct: 679 MEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTT 738

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI+ +C+AG + +A++L  EM   G   D   ++++  G    G +++AL + E++   G
Sbjct: 739 LIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG 798

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            Y   +S+  +++  C++G+L++ ++ L +M+ +  +P   T   +++ L +AG   +A
Sbjct: 799 -YAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEA 856



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 203/430 (47%), Gaps = 20/430 (4%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH--- 146
           G   N   Y+T++D   R    +    ++++M+    + ++  + NL++    C L    
Sbjct: 343 GLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL--CKLGRMG 400

Query: 147 --ERVLEMFHKIHPITREKPSLKAISTCLNLLIESN--QVDLAQNFLKYSN-QHLRLKPN 201
              R+L+   KI           A +   NL+IE +  Q +  + FL  +  +   + PN
Sbjct: 401 RASRILKQMTKI--------GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPN 452

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              ++I+I   C+ G  E A  +L++M    +  PN   Y+ LI G C+ G F  A E  
Sbjct: 453 VYTYSIIINGLCQIGESERASGLLEQMIADGLK-PNAFVYAPLISGYCREGSFSLACETL 511

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M +++ + PD   YN LI G    GK+D A +  + M   G  PN F Y  L++G+  
Sbjct: 512 KKM-TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSM 570

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G L++A+++  +M N  L P+   Y  ++  + ++  +++    LK M E+G   D   
Sbjct: 571 AGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL 630

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           + I++  L   G ++ A+ +L  +  +G+  +   Y  +++  C+  ++EKA+ LL  M 
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            +G  P  +  N L+   CK+     A      ++  G  P   ++  L++  C+   + 
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750

Query: 502 FAFELLDELV 511
            A +L +E++
Sbjct: 751 DAIDLYNEML 760



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 144/273 (52%), Gaps = 3/273 (1%)

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           +    L+D   K GR R+  E+   ++ KD  + P     N L+    R   +D   K+ 
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVV--LLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVR 231

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
            FM+  G +P+V+ Y+TL+  +CK   L+ AK+V +EM+      + + Y TLI   CRA
Sbjct: 232 GFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G ++EA    KEM++ G   D  T+  I+ GLC+ G+ ++A  +L+++   G+  N   Y
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++   ++G  ++A ++++ M   G  P+  T + L+  LCK G    A+  L  + +
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +G+  ++ ++ L++E   R      AF LL+E+
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM 444



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 176/391 (45%), Gaps = 35/391 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E ++ + E KGF  N+ TY  ++   +     E  + +L QM       ++ I+  ++
Sbjct: 542 AIEYYDEMLE-KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQIL 600

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           + +      E+V      +     EK   P  +     ++ L  S  +  A + L    +
Sbjct: 601 EGYFKSDNLEKVSSTLKSM----LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEK 656

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           +  L P++ I+  LI   CK   +E A  +L EM K  +  P +  Y+ LIDG CK+   
Sbjct: 657 N-GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIE-PGISCYNALIDGFCKSDDI 714

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A  +F  ++ K  + P+ +TY  LIDG+C+ G +  A  +   M   G  P+ F Y+ 
Sbjct: 715 SHARNIFNSIICKG-LPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSV 773

Query: 315 LMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           L  G    G LQ+A  + +EM  + + +      + TL++ FC+ G++ E ++ L  M +
Sbjct: 774 LAAGCSNSGDLQQALFITEEMIARGYAI---ISSFNTLVHGFCKRGKLQETVKFLHVMMD 830

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGM----------------LEKLWYDGIYLNKAS 416
           +     ++T   I+ GL   GK+ EA  +                L  L+ D I      
Sbjct: 831 KDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVP 890

Query: 417 YRIVLNF---SCQKGELEKAIELLRLMLCRG 444
             ++ N     C++G L+KA+ L   ++ +G
Sbjct: 891 LDVIHNMIQSHCKQGYLDKALMLHDALVAKG 921


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 175/315 (55%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           K +   +N LI   CK G +E+A+     MK+  +   N++T+ST +D  CK G  REA+
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGV-MANVVTFSTFVDAFCKEGLVREAM 313

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF +M  +   L +  TY  LIDG C+ G++D A  +++ M   G   NV  YT L++G
Sbjct: 314 KLFAQMRVRGMAL-NEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDG 372

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKE K+ EA++V   M+   ++ + + YTTLI+        ++AL LL EMK +G + D
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           I  +  ++ GLC   K++EA  +L K+   G+  N   Y  +++   + G++ +AI +L+
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +L  GF P+  T   L+  LCKAG  ++A      + ++G  P   ++  LV+ +C+  
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552

Query: 499 KLLFAFELLDELVIK 513
            L  A +L +E+V K
Sbjct: 553 CLNEAVQLFNEMVHK 567



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 169/333 (50%), Gaps = 37/333 (11%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   FNI+I   CK G L  A  +   MK+     P+++T+++LIDG  K G   E  +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG-CLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L EEM  +     D +TYN LI+ FC+ G+++ A      MK  G   NV  ++T ++ F
Sbjct: 245 LVEEM-RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG ++EA ++F +M+   +  +   YT LI+  C+AGR+D+A+ LL EM  +G   ++
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 380 VTFNIILGGLCREGKI-----------------------------------EEALGMLEK 404
           VT+ +++ GLC+E K+                                   E+ALG+L +
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+ L+ + Y  ++   C   +L++A  LL  M   G  P+Y     ++    K+G 
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +A   L  +++ GF+P   ++  L++ +C+ 
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKA 516



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 150/306 (49%), Gaps = 2/306 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   F+  +   CK G +  A ++  +M+   M+  N  TY+ LIDG CK GR  +AI L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMAL-NEFTYTCLIDGTCKAGRLDDAIVL 350

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EMV +   L + +TY VL+DG C+  KV  A+ ++  M+  G   N   YTTL++G  
Sbjct: 351 LDEMVRQGVPL-NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
                ++A  +  EMKN  L+ D   Y  LI   C   ++DEA  LL +M E G + + +
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +  ++    + GK+ EA+ ML+K+   G   N  +Y  +++  C+ G +++AI     M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G  P+      L+  LCK G   +A      +V  G   +   +  L++   +   L
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 501 LFAFEL 506
             AF L
Sbjct: 590 HDAFAL 595



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 143/258 (55%), Gaps = 6/258 (2%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           + + L+     RG L+ A   +  +++ ++  PN  T + ++  L ++   R    LFE+
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVP-PNTRTCNHILLRLARDRSGRLVRRLFEQ 182

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           + +     P+  T+N++ID  C+ G++  A+ +   MK  GC P+V  + +L++G+ K G
Sbjct: 183 LPA-----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +L E +++ +EM+    K D + Y  LINCFC+ GR++ A      MK  G  A++VTF+
Sbjct: 238 ELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFS 297

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
             +   C+EG + EA+ +  ++   G+ LN+ +Y  +++ +C+ G L+ AI LL  M+ +
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 444 GFLPHYATSNELLVRLCK 461
           G   +  T   L+  LCK
Sbjct: 358 GVPLNVVTYTVLVDGLCK 375



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 169/350 (48%), Gaps = 41/350 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-HFSNCSLH 146
           ++G   N  TY  ++D L + +K    + VLR M     + +E ++  L+  HF N    
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN---- 411

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
                           K S KA    L LL E              N+ L L  +  ++ 
Sbjct: 412 ----------------KNSEKA----LGLLSE------------MKNKGLEL--DISLYG 437

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI+  C    L+ A  +L +M +S +  PN I Y+T++D   K+G+  EAI + ++++ 
Sbjct: 438 ALIQGLCNVHKLDEAKSLLTKMDESGLE-PNYIIYTTMMDACFKSGKVPEAIAMLQKILD 496

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                P+ +TY  LIDG C+ G +D A      M++ G +PNV  YT L++G CK G L 
Sbjct: 497 SG-FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++F+EM +  +  D + YT L++ + + G + +A  L  +M + G + D+  +   +
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 615

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            G C    + EA  +  ++   GI  ++A Y  +++   + G LE+AI L
Sbjct: 616 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 2/271 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++ N  ++  LI  H      E A  +L EMK   +   ++  Y  LI GLC   +  EA
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL-DISLYGALIQGLCNVHKLDEA 452

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L  +M  +  + P+ + Y  ++D   + GKV  A  +++ + ++G  PNV  Y  L++
Sbjct: 453 KSLLTKM-DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G + EA   F++M++  L P+   YT L++  C+ G ++EA++L  EM  +G   
Sbjct: 512 GLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  +L G  ++G + +A  +  K+   G+ L+   Y   ++  C    + +A E+ 
Sbjct: 572 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVF 631

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             M+  G  P  A  N L+ +  K G  E+A
Sbjct: 632 SEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 41/234 (17%)

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL++     G L +A      ++   + P+T    T  +   R  R D +  L++ + E+
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNT---RTCNHILLRLAR-DRSGRLVRRLFEQ 182

Query: 374 GCKADIVTFNIILGGLCREGKIEEA---------LG------------------------ 400
               ++ TFNI++  LC+EG++ EA         +G                        
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 401 --MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             ++E++   G   +  +Y  ++N  C+ G +E A      M   G + +  T +  +  
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 459 LCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            CK G+  + A+ LF  + + G      ++  L++  C+  +L  A  LLDE+V
Sbjct: 303 FCKEGLVRE-AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 226/498 (45%), Gaps = 78/498 (15%)

Query: 50  CVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYK 109
           C D    +  ++   A  +++  ++P  A   F     + GF HN  T A +L+   + K
Sbjct: 31  CRDLAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAK 90

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           + E    +L++     C  +E ++                                    
Sbjct: 91  RHEEAHRLLKEELEPLCFPNEIMY------------------------------------ 114

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +T +N   ++ QVD A   L    +   +K +  + + LI+  C++G ++ A E  K M 
Sbjct: 115 TTVINGFCKAGQVDQAFELLDEMKER-GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 172

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL----PDALTYNVLIDGFC 285
             +   PN+ITY+T+++GLCK  R  EA+ELF++M  + +      PD ++Y+ +ID  C
Sbjct: 173 -GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALC 231

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK--------- 336
           +  +VD+A +  + M+  GC PNV  Y++L++G CK  +  E  E+   MK         
Sbjct: 232 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINII 291

Query: 337 --NFLL------------------------KPDTIGYTTLINCFCRAGRVDEALELLKEM 370
             N +L                        KP+ + Y   ++  C+AGRVDEA  +L EM
Sbjct: 292 DFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEM 351

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            E     D++T++ I+ G C+ G++++A  +  ++       +  ++  +L+   +  + 
Sbjct: 352 VESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 411

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            +A  +   M+  GF+P   T N L+  +C A   E A      +     +P+ +++A L
Sbjct: 412 REAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPL 471

Query: 491 VELICRGRKLLFAFELLD 508
           ++ +CR R++  A E LD
Sbjct: 472 IQCLCRARRVDEAKEFLD 489



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 194/378 (51%), Gaps = 44/378 (11%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           LN  +++ + + A   LK   + L   PN  ++  +I   CK G ++ AFE+L EMK+  
Sbjct: 83  LNAFVKAKRHEEAHRLLKEELEPLCF-PNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +   +++ +STLI GLC+ GR  EA+E F+ M   ++  P+ +TYN +++G C+  ++D 
Sbjct: 142 VKM-DVLLHSTLIQGLCRKGRIDEALEQFKSM--GEECSPNVITYNTVVNGLCKANRIDE 198

Query: 293 AKKIMEFMK-----NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           A ++ + M+     ++GC P+V +Y+T+++  CK  ++ +A E F  M+     P+ + Y
Sbjct: 199 ALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTY 258

Query: 348 TTLINCFCRAGRVDEALELLKEMKERG------------------------C-------- 375
           ++LI+  C+  R  E LELL  MKE+G                        C        
Sbjct: 259 SSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 318

Query: 376 ---KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              K ++VT+N+ + GLC+ G+++EA  +L ++    +  +  +Y  +++  C+ G ++K
Sbjct: 319 SGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 378

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A ++   M+    +PH  T   LL    +   + +A      +V  GF P   ++ +L++
Sbjct: 379 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 438

Query: 493 LICRGRKLLFAFELLDEL 510
            +C    +  A E+  ++
Sbjct: 439 CVCGADSVESALEIYHKM 456



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 223/473 (47%), Gaps = 46/473 (9%)

Query: 78  ALEIFNTVSEQKGFNH----NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           ALE+F+ + ++   +H    +  +Y+T++D L + ++ +      ++M    C  +   +
Sbjct: 199 ALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTY 258

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKP---SLKAISTCLNLLIESNQVDLAQNFLK 190
            +L+            LE+   +H   +EK    ++   +  L+ L ++++ + A  F +
Sbjct: 259 SSLIDGLCKVDRPSECLELL--LH--MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 314

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
              +  + KPN   +N+ +   CK G ++ A+ +L EM +S+++ P++ITYS++IDG CK
Sbjct: 315 RLLKSGK-KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVT-PDVITYSSIIDGFCK 372

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            GR  +A ++F  M+  + I P  +T+  L+ GF    K   A ++ E M N G  P + 
Sbjct: 373 AGRMDKADDVFTRMMVHECI-PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 431

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y  LM+  C    ++ A E++ +MK    +PD   Y  LI C CRA RVDEA E L  M
Sbjct: 432 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLE--------------KLWYDGIYLNK-- 414
           +      +    + ++  LC++G+++EA  +L+              K+  + +YL K  
Sbjct: 492 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKW 551

Query: 415 ----------------ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
                           A+Y + +   C+ G+ ++A+E++  M+ +G  P   T   +L  
Sbjct: 552 EAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRS 611

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           LC     E A      +   G  P   ++ LL+   C       AF + + +V
Sbjct: 612 LCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMV 664



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 163/367 (44%), Gaps = 42/367 (11%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY++I+D   +  + +  D V  +M    C  H   F+ L+  FS    H++  E F   
Sbjct: 362 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE---HKKSREAFR-- 416

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                               +  + V+    F+          P    +N+L+   C   
Sbjct: 417 --------------------VHEDMVN--AGFI----------PGLQTYNVLMDCVCGAD 444

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           ++ESA E+  +MK+ +   P+  TY+ LI  LC+  R  EA E F +++  D ++P+   
Sbjct: 445 SVESALEIYHKMKRKKRQ-PDCNTYAPLIQCLCRARRVDEAKE-FLDVMEADNVVPNGAI 502

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
            + L++  C+ G+VD A  +++ +   GC P    +  L+       K + A ++   ++
Sbjct: 503 CHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LR 559

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +     D   Y+  +   C+AG+ DEA+E++++M  +G + D  T+  +L  LC   ++E
Sbjct: 560 SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVE 619

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A+   EK+   G      +Y +++  +C     ++A  +   M+  GF P   T   L 
Sbjct: 620 SAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLS 679

Query: 457 VRLCKAG 463
             L  AG
Sbjct: 680 SCLRDAG 686


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 228/467 (48%), Gaps = 49/467 (10%)

Query: 73  KEPQCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           ++ +  L+ F+ VS  Q     N   Y+++L  LAR + F  ++ VL  M  E       
Sbjct: 71  RDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTRE 130

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
               +++ +S+  L E+ LE+++ +       P + A ++ LN+L++  ++++A+   K 
Sbjct: 131 AMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIAR---KL 187

Query: 192 SNQHLRLKP--NTCIFN----ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
            ++ L +    + C+ N    I++K  CK G LE   +++++ +  Q   PN+I Y+TLI
Sbjct: 188 YDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIED-RWGQGCIPNIIFYNTLI 246

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK---VDR---------- 292
           DG CK G    A  LF E+  K   LP   TY  +I+GFC+ G    +DR          
Sbjct: 247 DGYCKKGDMEMANGLFIELKLKG-FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGL 305

Query: 293 ----------------------AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
                                 A + +E M   GC P++  Y TL++G C++GK+ EA +
Sbjct: 306 TVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQ 365

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + ++     L P+   YT LI+ +C+ G  D A   L EM ERG K D+VT+  ++ GL 
Sbjct: 366 LLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLV 425

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
             G+++ AL + EK+   G++ +   Y I+++  C+K +L  A  LL  ML +  LP   
Sbjct: 426 VAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAF 485

Query: 451 TSNELLVRLCKAGMAEDAAIALFGL-VEMGFKPESDSWALLVELICR 496
               L+    + G   D A  LF L +E G  P    +  +++  C+
Sbjct: 486 VYATLVDGFIRNGNL-DEARKLFELTIEKGMNPGIVGYNAMIKGYCK 531



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 224/470 (47%), Gaps = 42/470 (8%)

Query: 44  VETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD 103
           V+  +T +DAR +   I    A+  I+   E  C  +I               TY T++ 
Sbjct: 309 VQVYNTIIDARYKHGHIVK--AVETIEGMIECGCKPDI--------------VTYNTLIS 352

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER----VLEMFHKIHPI 159
              R  K    D +L Q   +    ++  +  L+  +     ++R    ++EM  + H  
Sbjct: 353 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGH-- 410

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
              KP L      ++ L+ + +VD+A   ++       + P+  I+NIL+   CK+  L 
Sbjct: 411 ---KPDLVTYGALVHGLVVAGEVDVALT-IREKMLERGVFPDAGIYNILMSGLCKKFKLP 466

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           +A  +L EM   Q   P+   Y+TL+DG  +NG   EA +LFE  + K  + P  + YN 
Sbjct: 467 AAKLLLAEML-DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG-MNPGIVGYNA 524

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +I G+C+ G +  A   +  MK     P+ F Y+T+++G+ K+  L  A+++F EM    
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
            KP+ + YT+LIN FCR G +  +L++ +EM+  G   ++VT++I++G  C+E K+ +A 
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAA 644

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKG---------ELEKAIELLRL-----MLCRGF 445
              E++  +    N  ++  ++N   + G         E ++  + + L     M+  G+
Sbjct: 645 SFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGW 704

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            P  A  N +L+ LC+ GM   A      +   G  P+S S+  L+  +C
Sbjct: 705 APRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVC 754



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 208/475 (43%), Gaps = 55/475 (11%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF     TY  I++   +   F+A+D +L +M       +  ++  ++        H  
Sbjct: 268 KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK---HGH 324

Query: 149 VLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +++    I  +     KP +   +T ++      +V  A   L+ +     L PN   + 
Sbjct: 325 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK-GLMPNKFSYT 383

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +CK+G  + A   L EM +     P+L+TY  L+ GL   G    A+ + E+M+ 
Sbjct: 384 PLIHAYCKQGGYDRASNWLIEMTERGHK-PDLVTYGALVHGLVVAGEVDVALTIREKMLE 442

Query: 267 K---------------------------------DQ-ILPDALTYNVLIDGFCRGGKVDR 292
           +                                 DQ +LPDA  Y  L+DGF R G +D 
Sbjct: 443 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 502

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A+K+ E     G NP +  Y  ++ G+CK G +++A    + MK   L PD   Y+T+I+
Sbjct: 503 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 562

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            + +   +D A ++ +EM +  CK ++VT+  ++ G CR+G +  +L +  ++   G+  
Sbjct: 563 GYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVP 622

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM-------- 464
           N  +Y I++   C++ +L  A      ML    +P+  T N L+    K G         
Sbjct: 623 NVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGN 682

Query: 465 -----AEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                 +   +  FG ++  G+ P S ++  ++  +C+      A +L +++  K
Sbjct: 683 EFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSK 737



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 143/312 (45%), Gaps = 62/312 (19%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P     +T ++  I +  +D A+   + + +   + P    +N +IK +CK G ++ A  
Sbjct: 482 PDAFVYATLVDGFIRNGNLDEARKLFELTIEK-GMNPGIVGYNAMIKGYCKFGMMKDAMA 540

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
            +  MKK  ++ P+  TYST+IDG  K      A ++F EMV K +  P+ +TY  LI+G
Sbjct: 541 CINRMKKRHLA-PDEFTYSTVIDGYVKQHDLDGAQKMFREMV-KMKCKPNVVTYTSLING 598

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK------- 336
           FCR G + R+ KI   M+  G  PNV  Y+ L+  FCKE KL +A   F+EM        
Sbjct: 599 FCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPN 658

Query: 337 ----NFLLK--------------------------------------PDTIGYTTLINCF 354
               N+L+                                       P +  Y +++ C 
Sbjct: 659 DVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICL 718

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY--L 412
           C+ G    AL+L  +M  +GC  D V+F  +L G+C EG+ +E        W + +   L
Sbjct: 719 CQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKE--------WKNIVSCNL 770

Query: 413 NKASYRIVLNFS 424
           N+   +I +N+S
Sbjct: 771 NERELQIAVNYS 782



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 31/259 (11%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY+T++D   +    +    + R+M    CK +   + +L+  F       R L++F ++
Sbjct: 556 TYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREM 615

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P++   S  +    +  ++  A +F +    + +  PN   FN L+    K G
Sbjct: 616 QACGL-VPNVVTYSILIGSFCKEAKLIDAASFFEEMLMN-KCVPNDVTFNYLVNGFSKNG 673

Query: 217 TLESAFEVLKEMKKSQMSY--------------PNLITYSTLIDGLCKNGRFREAIELFE 262
           T  +  E   E ++++ S               P    Y++++  LC+ G FR A++L  
Sbjct: 674 T-RAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSN 732

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN------VFNYTTLM 316
           +M SK  I PD++++  L+ G C  G+    K I+       CN N        NY++++
Sbjct: 733 KMTSKGCI-PDSVSFVALLHGVCLEGRSKEWKNIVS------CNLNERELQIAVNYSSIL 785

Query: 317 NGFCKEGKLQEAKEVFDEM 335
           + +  +G   EA  +   M
Sbjct: 786 DQYLPQGT-SEASVILQTM 803


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 206/413 (49%), Gaps = 12/413 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM-KHFSNCSLH 146
             G   N  TY  +L  L R  + +    ++ +M   +  F +G   +++    +     
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS-MFPDGFTYSILFDGLTRTGES 315

Query: 147 ERVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
             +L +F +    + +K  +    TC   LN L +  +V  A+  L+    H  L P T 
Sbjct: 316 RTMLSLFAE----SLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML-VHTGLVPTTV 370

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           I+N LI  +C+   L  AF + ++MK   +  P+ ITY+ LI+GLCK     +A +L  E
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIR-PDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  K  + P   T+N LID +   G++++   ++  M+  G   +V ++ +++  FCK G
Sbjct: 430 M-EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 488

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K+ EA  + D+M    + P+   Y ++I+ +  +G  ++A  L+++MK  G  A IVT+N
Sbjct: 489 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYN 548

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           ++L GLCR  +I+EA  ++  L   G+  +  SY  +++  C KG+ +KA+ELL+ M   
Sbjct: 549 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           G  P   T + L+  L  AG   D       ++    +P S  + ++V+   R
Sbjct: 609 GIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 181/351 (51%), Gaps = 10/351 (2%)

Query: 166 LKAISTCLNLLIES-----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           L ++S+C NLL+ES        D+   F        R  P+T  +N +++     G L+ 
Sbjct: 119 LPSLSSC-NLLLESLLFVGRHADVRAAFGLLVAAGAR--PDTFAWNKVVQACVAAGDLDV 175

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           A  +++ M +S+ + P +  +Y+ +I GL ++G+  +A+++F+EMV    ++P+ +TYN 
Sbjct: 176 ALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM-GVVPNWITYNT 234

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +IDG  +GG ++   ++ + M ++G  PN+  Y  L++G C+ G++ E + + DEM +  
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 294

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + PD   Y+ L +   R G     L L  E  ++G      T +I+L GLC++GK+ +A 
Sbjct: 295 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 354

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +LE L + G+      Y  ++N  CQ  +L  A  +   M  R   P + T N L+  L
Sbjct: 355 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           CK  M   A   +  + + G  P  +++  L++      +L   F +L ++
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 172/363 (47%), Gaps = 36/363 (9%)

Query: 183 DLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           DL   F L+    H   KPN   +N+L+   C+ G ++    ++ EM    M +P+  TY
Sbjct: 244 DLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSM-FPDGFTY 302

Query: 242 STLIDGLCKNGRFREAIELFEEMVSK-------------------------DQIL----- 271
           S L DGL + G  R  + LF E + K                         +Q+L     
Sbjct: 303 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 362

Query: 272 ----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               P  + YN LI+G+C+   +  A  I E MK+    P+   Y  L+NG CK   + +
Sbjct: 363 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 422

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+++  EM+   + P    + TLI+ +  AG++++   +L +M+++G K+D+++F  ++ 
Sbjct: 423 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 482

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
             C+ GKI EA+ +L+ + Y  +  N   Y  +++   + G+ E+A  L+  M   G   
Sbjct: 483 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 542

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N LL  LC++   ++A   ++ L   G +P+  S+  ++   C       A ELL
Sbjct: 543 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 602

Query: 508 DEL 510
            E+
Sbjct: 603 QEM 605



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 100/181 (55%), Gaps = 2/181 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  ++N +I  + + G  E AF ++++MK S +S  +++TY+ L+ GLC++ +  EA
Sbjct: 505 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS-ASIVTYNLLLKGLCRSSQIDEA 563

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL   + ++  + PD ++YN +I   C  G  D+A ++++ M   G  P +  Y TL++
Sbjct: 564 EELIYTLRNQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVS 622

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
                G++ + + ++ +M +  ++P +  Y  +++ + R     +   L KEM E+G   
Sbjct: 623 ALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAF 682

Query: 378 D 378
           D
Sbjct: 683 D 683



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 32/261 (12%)

Query: 32  VIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVS--EQK 89
           V++      DP VET +T +DA        +G A  L KC          F  +S  +QK
Sbjct: 427 VMEMEKSGVDPSVETFNTLIDA--------YGTAGQLEKC----------FTVLSDMQQK 468

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  ++ +++    +  K     A+L  M Y+    +  ++ +++  +      E+ 
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 528

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIF 205
             +  K+     +   + A     NLL++    S+Q+D A+  + Y+ ++  L+P+   +
Sbjct: 529 FLLVEKM-----KNSGVSASIVTYNLLLKGLCRSSQIDEAEELI-YTLRNQGLRPDVVSY 582

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N +I   C +G  + A E+L+EM K  +  P L TY TL+  L   GR  +   L+++M+
Sbjct: 583 NTIISACCNKGDTDKALELLQEMNKYGIR-PTLRTYHTLVSALASAGRVHDMECLYQQML 641

Query: 266 SKDQILPDALTYNVLIDGFCR 286
            K+ + P +  Y +++D + R
Sbjct: 642 HKN-VEPSSSIYGIMVDAYVR 661


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 239/507 (47%), Gaps = 34/507 (6%)

Query: 36  NTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNN 95
           NTP     +++S   +    R   ++H A       + + + AL+I +++ E+ G +   
Sbjct: 47  NTPAHG--IDSSIITIQTMTRWETLNHMAYKFGSLGKSDGKLALKILSSIVERSGLDRIT 104

Query: 96  ATYATILDKLARYKKFEAVDAVLRQM--TYETCKFHEGIFLNLMKHFSNCS-LHERVLEM 152
             Y   +  L + +      +VL+ +  T  +C     IF +L++  S     +  V E+
Sbjct: 105 YVYCMAVPILIQAQMHSQAMSVLKHLAVTGFSCT---AIFTSLLRTISRFDPTNHVVFEL 161

Query: 153 FHKIHPITRE----------------KPSLKAISTCLNLLIESNQVDLAQNFLKYS-NQH 195
             K +   R+                K S  + +T LN L+E  +      FL+ S  + 
Sbjct: 162 LVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARK 221

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L   TC  NIL+   C  G    A ++L++MK   +S  N +TY+T++    K GRF+
Sbjct: 222 FPLGVTTC--NILLNSLCTNGEFRKAEDMLQKMKSCHIS--NSVTYNTILHWYVKKGRFK 277

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+ + E+M  +D +  D  TYN++ID  CR  +  RA  +++ M+ +   P+   Y TL
Sbjct: 278 AALCVLEDM-ERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTL 336

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGF +EGK+  A+ VF+ M    L P    YTT+I+ +CR  R+D+AL +L EM+  G 
Sbjct: 337 INGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGV 396

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
               +T++ +L G C+   +  A+ ++E L   GI +NK    I+++  CQ GE+ KA +
Sbjct: 397 MPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQ 456

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +L+ M   G  P   T + L+  +C+     +    L  + + G  P      L   LIC
Sbjct: 457 ILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPND---VLYTTLIC 513

Query: 496 RGRKLLFAFELLDELV-IKESGTIQVP 521
              K  +  E L   V I   G +  P
Sbjct: 514 YYCKAGYVKEALKHFVDIYRRGLVANP 540



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 204/421 (48%), Gaps = 10/421 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N+ TY TIL    +  +F+A   VL  M  ++ +     +  ++          R   + 
Sbjct: 259 NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLL 318

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL---RLKPNTCIFNILIK 210
            ++      K  L       N LI     +   N  +Y   H+    L P+   +  +I 
Sbjct: 319 KRM-----RKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMID 373

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
            +C+   ++ A  +L EM+ + +  P+ +TYS L++G CK      AI L E++ S+  I
Sbjct: 374 GYCRNRRIDKALSILSEMQITGV-MPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRG-I 431

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
             +     +LIDGFC+ G++ +AK+I++ M  +G +P+V  Y+ L+NG C+  K+ E KE
Sbjct: 432 TINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKE 491

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +   M+   + P+ + YTTLI  +C+AG V EAL+   ++  RG  A+ V  N +L    
Sbjct: 492 ILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFY 551

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           REG I EA    + +    I  +  S+  +++  C +G +  A  +   M+  G+ P+  
Sbjct: 552 REGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVC 611

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T   LL  LC+ G    A   +  L+++ F  +  ++  L+  ICR   L  A +L +++
Sbjct: 612 TYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKM 671

Query: 511 V 511
           +
Sbjct: 672 I 672



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 211/448 (47%), Gaps = 14/448 (3%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           K   C LE      E+     +  TY  ++DKL R K+      +L++M  +     E  
Sbjct: 277 KAALCVLEDM----ERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECT 332

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLK 190
           +  L+  F       ++    +  + + R+   PS+   +T ++    + ++D A + L 
Sbjct: 333 YNTLINGFFR---EGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILS 389

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
              Q   + P+   ++ L+  +CK   L  A  +++++K   ++  N    + LIDG C+
Sbjct: 390 -EMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITI-NKTMRTILIDGFCQ 447

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G   +A ++ + M  +D I PD +TY+ LI+G CR  K+   K+I+  M+ +G  PN  
Sbjct: 448 VGEISKAKQILKSMF-EDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 506

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            YTTL+  +CK G ++EA + F ++    L  + + +  L++ F R G + EA    + M
Sbjct: 507 LYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYM 566

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
                  D V+FN I+   C  G I  A  + + +   G   N  +Y+ +L   CQ G L
Sbjct: 567 SRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHL 626

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            +A + +  +L   F     T N LL+ +C+ G  ++A      +++    P+  ++ +L
Sbjct: 627 VQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTIL 686

Query: 491 VELICRGRKLLFAFELLDELVIKESGTI 518
           +   CR  K+L A  +L  ++  E G +
Sbjct: 687 LSGFCRKGKILPALVILQMML--EKGVV 712



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 219/498 (43%), Gaps = 83/498 (16%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G + +  TY+ +++ + R  K      +L +M       ++ ++  L+ ++      +
Sbjct: 463 EDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVK 522

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTC 203
             L+ F  I+     +  L A     N L+ +      +  A++F +Y ++ + +  ++ 
Sbjct: 523 EALKHFVDIY-----RRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSR-MNISFDSV 576

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF--------- 254
            FN +I  +C RG +  AF V  +M +   S PN+ TY  L+ GLC+ G           
Sbjct: 577 SFNRIIDSYCHRGNIVGAFSVYDDMVRYGYS-PNVCTYQNLLRGLCQGGHLVQARQFMSC 635

Query: 255 --------------------------REAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
                                      EA++L E+M+ K+  LPD  TY +L+ GFCR G
Sbjct: 636 LLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMI-KNNCLPDIHTYTILLSGFCRKG 694

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK-NFLLKPDTIGY 347
           K+  A  I++ M   G  P+   YT L+NG   EG+++ A  VF E+     L  D I Y
Sbjct: 695 KILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAY 754

Query: 348 TTLINCFCRA-----------------------------------GRVDEALELLKEMKE 372
            +L+N + ++                                   G+  ++L L K M  
Sbjct: 755 NSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR 814

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G + D VT+ +++ GL   G I+ A+  LEK+  +GI+ ++  + I++    +K ++  
Sbjct: 815 KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHN 874

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+++   M      P   T + ++  L + G  + +   L  ++++G +P    +  LV 
Sbjct: 875 ALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVN 934

Query: 493 LICRGRKLLFAFELLDEL 510
             CR  ++  AF L +E+
Sbjct: 935 AKCRVGEIDRAFRLKEEM 952



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 159/342 (46%), Gaps = 36/342 (10%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+   + IL+   C++G +  A  +L+ M +  +  P+ + Y+ L++GL   G+ + A  
Sbjct: 678  PDIHTYTILLSGFCRKGKILPALVILQMMLEKGV-VPDTVAYTCLLNGLINEGQVKAASY 736

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            +F E++ K+ +  D + YN L++G+ +   V+  K++M  M  N   PN  +Y  LM+G+
Sbjct: 737  VFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGY 796

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             K G+  ++  ++  M    ++PD + Y  LI      G +D A++ L++M   G   D 
Sbjct: 797  VKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDR 856

Query: 380  VTFNII-----------------------------------LGGLCREGKIEEALGMLEK 404
            + F+I+                                   + GL R+G ++ +  +L +
Sbjct: 857  LVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHE 916

Query: 405  LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            +   G+  N   Y  ++N  C+ GE+++A  L   M   G +P     + ++  LC+ G 
Sbjct: 917  MLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGK 976

Query: 465  AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
             E+A I    ++  G  P   ++  L+  +C+  K+  A  L
Sbjct: 977  LEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHL 1018



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 156/300 (52%), Gaps = 15/300 (5%)

Query: 176  LIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
            L E   +D+A  FL    + + L+   P+  +F+ILI    ++  + +A +V   MK   
Sbjct: 831  LSECGLIDIAVKFL----EKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLH 886

Query: 233  MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            MS P+  T+S +I+GL + G    + ++  EM+ +  + P+   Y  L++  CR G++DR
Sbjct: 887  MS-PSSKTFSAMINGLIRKGYLDHSHKVLHEML-QVGLQPNHTHYIALVNAKCRVGEIDR 944

Query: 293  AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            A ++ E MK  G  P     ++++ G C+ GKL+EA  VF  M    + P    +TTL++
Sbjct: 945  AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMH 1004

Query: 353  CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              C+  ++ +AL L + M+    + D+V++N+++ GLC++  I +AL +  ++   G++ 
Sbjct: 1005 SLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWP 1064

Query: 413  NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
            N  +Y  +       G ++   ELL  +  RG +P Y     L  R+      EDA I L
Sbjct: 1065 NITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPAYKQPENLERRM------EDAIIRL 1118



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/489 (22%), Positives = 211/489 (43%), Gaps = 75/489 (15%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
           ATY T++D   R ++ +   ++L +M        E  +  L+  +   S+    + +   
Sbjct: 366 ATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMED 425

Query: 156 IHPITREKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
           +   +R     K + T L +   +  ++  A+  LK S     + P+   ++ LI   C+
Sbjct: 426 LK--SRGITINKTMRTILIDGFCQVGEISKAKQILK-SMFEDGIDPDVITYSALINGMCR 482

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI---------------- 258
              +    E+L  M+KS +  PN + Y+TLI   CK G  +EA+                
Sbjct: 483 MAKMHETKEILSRMQKSGI-LPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPV 541

Query: 259 ------------------ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
                             E F + +S+  I  D++++N +ID +C  G +  A  + + M
Sbjct: 542 IHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDM 601

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G +PNV  Y  L+ G C+ G L +A++    + +     D   +  L+   CR G +
Sbjct: 602 VRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTL 661

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEAL+L ++M +  C  DI T+ I+L G CR+GKI  AL +L+ +   G+  +  +Y  +
Sbjct: 662 DEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCL 721

Query: 421 LNFSCQKGELEKAIELLRLMLCR---------------GFL------------------- 446
           LN    +G+++ A  +   ++C+               G+L                   
Sbjct: 722 LNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNE 781

Query: 447 --PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+ A+ N L+    K G    +      +V  G +P++ ++ LL+  +     +  A 
Sbjct: 782 VYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAV 841

Query: 505 ELLDELVIK 513
           + L+++V++
Sbjct: 842 KFLEKMVLE 850



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 158/352 (44%), Gaps = 42/352 (11%)

Query: 168  AISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
            A ++ +N  ++S  V+  +  +   Y N+   + PN+  +NIL+  + KRG    +  + 
Sbjct: 753  AYNSLMNGYLKSRNVNTIKRMMSDMYQNE---VYPNSASYNILMHGYVKRGQFSKSLYLY 809

Query: 226  KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI---- 281
            K M +  +  P+ +TY  LI GL + G    A++  E+MV  + I PD L +++LI    
Sbjct: 810  KYMVRKGIR-PDNVTYRLLILGLSECGLIDIAVKFLEKMV-LEGIFPDRLVFDILITAFS 867

Query: 282  -------------------------------DGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
                                           +G  R G +D + K++  M   G  PN  
Sbjct: 868  EKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHT 927

Query: 311  NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            +Y  L+N  C+ G++  A  + +EMK   + P  +  +++I   CR G+++EA+ +   M
Sbjct: 928  HYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSM 987

Query: 371  KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
               G    + TF  ++  LC+E KI +AL +   +    + ++  SY +++   C+   +
Sbjct: 988  MRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHI 1047

Query: 431  EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
              A++L   M  +G  P+  T   L   +   G  ++    L  + E G  P
Sbjct: 1048 SDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 175/346 (50%), Gaps = 37/346 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N +I  H K G LE+ F +  +M    +  PN ITY+ L+ GLC+ GR  E   
Sbjct: 96  PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLK-PNAITYNVLLSGLCRAGRMGETSA 154

Query: 260 LFEEMVSKDQILPDALTYNVLIDGF----------------------------------- 284
           L +EM S+ +++PD  TY++L DG                                    
Sbjct: 155 LLDEMASQ-KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGL 213

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ GKV  A+++++ + N G  P    Y TL+NG+C+ G+L+ A   F +MK+  +KPD 
Sbjct: 214 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 273

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I Y  LIN  C+A R+  A +LL EM++ G    + TFN ++    R G++E+   +L +
Sbjct: 274 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 333

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +  +G+  N  SY  ++N  C+ G++ +A+ +L  M  +  LP+    N ++    + G 
Sbjct: 334 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 393

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + A I +  +   G  P   ++ LL++ +C   ++  A E+++ L
Sbjct: 394 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 439



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 210/428 (49%), Gaps = 8/428 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY  +L  L R  +     A+L +M  +        +  L    S     + +
Sbjct: 128 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 187

Query: 150 LEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           L +F K   + +T    +    S  LN L +  +V +A+  L+ S  +  L P   I+N 
Sbjct: 188 LSLFGKYLKNGVTIGDYTC---SILLNGLCKDGKVSIAEEVLQ-SLVNAGLVPTRVIYNT 243

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +C+ G LE AF    +MK   +  P+ ITY+ LI+GLCK  R   A +L  EM   
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIK-PDHITYNALINGLCKAERITNAQDLLMEM-QD 301

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + P   T+N LID + R G++++   ++  M+ NG  PNV +Y +++N FCK GK+ E
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 361

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  + D+M +  + P+   Y  +I+ +   G  D+A  L+++MK  G    IVT+N+++ 
Sbjct: 362 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 421

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC + +I EA  ++  L    +  +  SY  +++  C +G ++KA++L + M   G   
Sbjct: 422 GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS 481

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T ++L+  L  AG   +       +++    P +    ++VE   +    + A +L 
Sbjct: 482 TVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 541

Query: 508 DELVIKES 515
            E++ K +
Sbjct: 542 KEMLQKRN 549



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 162/318 (50%), Gaps = 3/318 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+T  +N  ++     G L  A  +L+ M +     PN  +Y+ +I G+ + GR  +A+
Sbjct: 24  RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 83

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+F+EM  +  +LP+ +TYN +IDG  +GG ++   ++ + M  +G  PN   Y  L++G
Sbjct: 84  EVFDEMTER-AVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSG 142

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+ G++ E   + DEM +  + PD   Y+ L +   R G     L L  +  + G    
Sbjct: 143 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 202

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T +I+L GLC++GK+  A  +L+ L   G+   +  Y  ++N  CQ GELE A     
Sbjct: 203 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 262

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  R   P + T N L+  LCKA    +A   L  + + G  P  +++  L++   R  
Sbjct: 263 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 322

Query: 499 KLLFAFELLDELVIKESG 516
           +L   F +L E+  +E+G
Sbjct: 323 QLEKCFIVLSEM--QENG 338



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 1/155 (0%)

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-YLNKAS 416
           GR  +       +   G + D   +N  +      G + EA+GML ++  DG    N  S
Sbjct: 6   GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +V+    + G    A+E+   M  R  LP++ T N ++    K G  E        +V
Sbjct: 66  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             G KP + ++ +L+  +CR  ++     LLDE+ 
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 160


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 182/351 (51%), Gaps = 3/351 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T +     + +VD A+  +        LKPN   FN ++   CK G +E A +
Sbjct: 183 PNVVTYNTLVAAFFRAGEVDGAERLVGMMLDG-GLKPNLVTFNSMVNGMCKAGKMEDARK 241

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V  EM +  ++ P+ ++Y+TL+ G CK G   EA+ +F EM  K  I+PD +T+  LI  
Sbjct: 242 VFDEMMREGLA-PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG-IMPDVVTFTSLIHV 299

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G ++ A  ++  M+  G   N   +T L++GFCK+G L +A      M+   +KP 
Sbjct: 300 MCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPS 359

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  LIN +C  GR+DEA ELL EM+ +G K D+VT++ I+   C+      A  + +
Sbjct: 360 VVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 419

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  +  +Y  ++   C++  L  A  L + M+  G  P   T   L+   CK G
Sbjct: 420 QMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 479

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             E A      +V+ G  P+  ++++L+  + +  + + A +LL +L  +E
Sbjct: 480 NVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEE 530



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 158/279 (56%), Gaps = 3/279 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN+ TY+ LI  LC  G  +EA+ +  +M       P+ +TYN L+  F R G+VD A++
Sbjct: 148 PNVYTYNILIRALCGRGHRKEALSILRDMRGAG-CGPNVVTYNTLVAAFFRAGEVDGAER 206

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M + G  PN+  + +++NG CK GK+++A++VFDEM    L PD + Y TL+  +C
Sbjct: 207 LVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYC 266

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +AG   EAL +  EM ++G   D+VTF  ++  +C+ G +E A+ ++ ++   G+ +N+ 
Sbjct: 267 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEV 326

Query: 416 SYRIVLNFSCQKGELEKAIELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           ++  +++  C+KG L+ A+  +R M  CR   P     N L+   C  G  ++A   L  
Sbjct: 327 TFTALIDGFCKKGFLDDALLAVRGMRQCR-IKPSVVCYNALINGYCMVGRMDEARELLHE 385

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +   G KP+  +++ ++   C+      AFEL  +++ K
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 424



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 191/404 (47%), Gaps = 20/404 (4%)

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK-AIST 171
           A  A  RQ T E C  H         H ++ +    +L    ++ P+   +  L  ++ T
Sbjct: 3   AASASTRQATAEACSSH--------VHHAHLA---ALLNASARLPPLPLSRLHLPLSLPT 51

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI--FNILIKHHCKRGTLESAFEVLKEMK 229
              L+     + L   FL+     LRL P++    F+ LIK +       S         
Sbjct: 52  ASRLVASFPPLPLLVCFLRA----LRLLPSSPPRPFDSLIKSYASLPNRASLAAAALAFA 107

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           +S    P+++ Y+ ++  L  +     A   F+ M+S D + P+  TYN+LI   C  G 
Sbjct: 108 RSAGYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLS-DGVAPNVYTYNILIRALCGRGH 165

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
              A  I+  M+  GC PNV  Y TL+  F + G++  A+ +   M +  LKP+ + + +
Sbjct: 166 RKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNS 225

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           ++N  C+AG++++A ++  EM   G   D V++N ++GG C+ G   EAL +  ++   G
Sbjct: 226 MVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I  +  ++  +++  C+ G LE A+ L+R M  RG   +  T   L+   CK G  +DA 
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +A+ G+ +   KP    +  L+   C   ++  A ELL E+  K
Sbjct: 346 LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 389



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 192/410 (46%), Gaps = 63/410 (15%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F  ++ QKG   +  T+ +++  + +    E    ++RQM     + +E  F  L+
Sbjct: 274 ALSVFAEMT-QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALI 332

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F      +  L              +++ +  C                        R
Sbjct: 333 DGFCKKGFLDDALL-------------AVRGMRQC------------------------R 355

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+   +N LI  +C  G ++ A E+L EM+   +  P+++TYST+I   CKN     A
Sbjct: 356 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK-PDVVTYSTIISAYCKNCDTHSA 414

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL ++M+ K  +LPDA+TY+ LI   C   ++  A  + + M   G  P+ F YT+L++
Sbjct: 415 FELNQQMLEKG-VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER---- 373
           G CKEG ++ A  + D+M    + PD + Y+ LIN   ++ R  EA +LL ++       
Sbjct: 474 GHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533

Query: 374 ---------GC--KADIVTFNIILGGLCREGKIEEA----LGMLEKLWYDGIYLNKASYR 418
                     C  KA++ +   +L G C +G + EA      ML++ W     L+ + Y 
Sbjct: 534 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN----LDGSVYS 589

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           ++++  C+ G + KA+   + ML RGF P+  ++  L+  L + GM  +A
Sbjct: 590 VLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEA 639



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 212/439 (48%), Gaps = 23/439 (5%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  T+ ++++ + +  K E    V  +M  E        +  L+  +         
Sbjct: 215 GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEA 274

Query: 150 LEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           L +F ++   T++   P +   ++ ++++ ++  ++ A   ++   +   L+ N   F  
Sbjct: 275 LSVFAEM---TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRER-GLQMNEVTFTA 330

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   CK+G L+ A   ++ M++ ++  P+++ Y+ LI+G C  GR  EA EL  EM +K
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIK-PSVVCYNALINGYCMVGRMDEARELLHEMEAK 389

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD +TY+ +I  +C+      A ++ + M   G  P+   Y++L+   C+E +L +
Sbjct: 390 G-LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD 448

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F  M    L+PD   YT+LI+  C+ G V+ AL L  +M + G   D+VT+++++ 
Sbjct: 449 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN 508

Query: 388 GLCREGKIEEALGMLEKLW----------YDGIY--LNKASYRIVLNFS---CQKGELEK 432
           GL +  +  EA  +L KL+          YD +     KA  + VL      C KG + +
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A ++ + ML R +    +  + L+   C+AG    A      +++ GF P S S   L+ 
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIR 628

Query: 493 LICRGRKLLFAFELLDELV 511
            +     ++ A +++ +L+
Sbjct: 629 GLFENGMVVEADQVIQQLL 647


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 153/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 226 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD   YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 285 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLL 404

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 405 KEMQRNGHAPSVVTYNVLM 423



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 190 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP+  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEM 407



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 152/261 (58%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 168 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 226 NELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 283

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+ F YTTL++G CKEG L  A E    M    ++
Sbjct: 284 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 343

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K DI T+ +I+   C++G + +   +
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL 403

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  +G   +  +Y +++N
Sbjct: 404 LKEMQRNGHAPSVVTYNVLMN 424



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 130/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TLI GLCK G  ++A +L +EM S   + PD  TY  L
Sbjct: 260 AMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMKGLKPDKFTYTTL 317

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 318 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 378 KPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +  F EA  L + +VS+                      D  +   
Sbjct: 12  TLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIME-FMKNN---------------G 304
           L    L  GF R                  D  +K++E  MK                 G
Sbjct: 72  LITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECG 131

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 312 FTYTTLIDGCCKEGDLDTAFE 332



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 140/302 (46%), Gaps = 44/302 (14%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 45  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFD 102

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
               VL        K+   K +  F ++    G   +++ +  LM+ FCK+G ++ A+ V
Sbjct: 103 TCRKVLEHLM----KLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSV 158

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T+++++ GLC+
Sbjct: 159 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 218

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +   P   T
Sbjct: 219 ESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 278

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+  LCK G                                    L  A +L+DE+ 
Sbjct: 279 YNTLIYGLCKKG-----------------------------------DLKQAHDLIDEMS 303

Query: 512 IK 513
           +K
Sbjct: 304 MK 305


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 167/287 (58%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+V  A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ ALE  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRV  A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G+LE A+E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 151/299 (50%), Gaps = 19/299 (6%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         L   
Sbjct: 45  KGSASAVFAEILETKGTQTS--DIYVFSGLITAYLESGFLRDAIECYR--------LTKE 94

Query: 275 LTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQ 326
             + V  D  CR       K+   K +  F + +   G   +++ +  LM+ F KEG+++
Sbjct: 95  HKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIR 153

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+ VFD +  + L+P  + + TL+N + + G +DE   L   M+  G + D+ T+++++
Sbjct: 154 LAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLI 213

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+E K+++A  + +++  +G+  N  ++  +++  C+ G +  A+E+ + ML +   
Sbjct: 214 NGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLS 273

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           P   T N L+  LCK G  + A   +  +   G KP+  ++  L++  C+   L  A E
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALE 332


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 149/256 (58%), Gaps = 2/256 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  +I   CK G  ESA  +L +M+++ +   +++ Y+ +ID LCK+G    A  LF EM
Sbjct: 44  YGTIINGLCKMGDTESALNLLSKMEETHIK-AHVVIYNAIIDRLCKDGHHIHAQNLFTEM 102

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  I PD +TY+ +ID FCR G+   A++++  M     NP+V  ++ L+N   KEGK
Sbjct: 103 HDKG-IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA+E++ +M    + P TI Y ++I+ FC+  R+++A  +L  M  + C  D+VTF+ 
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+  +++  + +  ++   GI  N  +Y  +++  CQ G+L+ A +LL +M+  G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281

Query: 445 FLPHYATSNELLVRLC 460
             P+Y T   +L  LC
Sbjct: 282 VAPNYITFQSMLASLC 297



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 7/291 (2%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFN 206
           RVL+    +  +  E    +   T +N L +    + A N L K    H+  K +  I+N
Sbjct: 25  RVLQALALVDRMVEE--GHQPYGTIINGLCKMGDTESALNLLSKMEETHI--KAHVVIYN 80

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G    A  +  EM    + +P++ITYS +ID  C++GR+ +A +L  +M+ 
Sbjct: 81  AIIDRLCKDGHHIHAQNLFTEMHDKGI-FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           + QI PD +T++ LI+   + GKV  A++I   M   G  P    Y ++++GFCK+ +L 
Sbjct: 140 R-QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +AK + D M +    PD + ++TLIN +C+A RVD  +E+  EM  RG  A+ VT+  ++
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            G C+ G ++ A  +L  +   G+  N  +++ +L   C K EL KA  +L
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 172/336 (51%), Gaps = 46/336 (13%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           CE     AL + + + E+      +  Y TI++ L +    E+   +L +M     K H 
Sbjct: 22  CEGRVLQALALVDRMVEE-----GHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHV 76

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
            I+  ++         +R+ +  H IH                           AQN   
Sbjct: 77  VIYNAII---------DRLCKDGHHIH---------------------------AQNL-- 98

Query: 191 YSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           ++  H + + P+   ++ +I   C+ G    A ++L++M + Q++ P+++T+S LI+ L 
Sbjct: 99  FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQIN-PDVVTFSALINALV 157

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K G+  EA E++ +M+ +  I P  +TYN +IDGFC+  +++ AK++++ M +  C+P+V
Sbjct: 158 KEGKVSEAEEIYGDMLRRG-IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             ++TL+NG+CK  ++    E+F EM    +  +T+ YTTLI+ FC+ G +D A +LL  
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
           M   G   + +TF  +L  LC + ++ +A  +LE L
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 4/214 (1%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC P+V  +TTLMNG C EG++ +A  + D M     +P    Y T+IN  C+ G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            + AL LL +M+E   KA +V +N I+  LC++G    A  +  ++   GI+ +  +Y  
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G    A +LLR M+ R   P   T + L+  L K G   +A      ++  G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P + ++  +++  C+  +L  A  +LD +  K
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 4/145 (2%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M E GC+ D+VTF  ++ GLC EG++ +AL +++++  +G       Y  ++N  C+ G+
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGD 56

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            E A+ LL  M       H    N ++ RLCK G    A      + + G  P+  +++ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 490 LVELICRGRKLLFAFELLDELVIKE 514
           +++  CR  +   A +LL +++ ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQ 141



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 42/214 (19%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           ++  A I+ +  E +   A EI+  +  ++G      TY +++D   +  +      +L 
Sbjct: 147 VTFSALINALVKEGKVSEAEEIYGDML-RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLD 205

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
            M  ++C                                     P +   ST +N   ++
Sbjct: 206 SMASKSC------------------------------------SPDVVTFSTLINGYCKA 229

Query: 180 NQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
            +VD       +   H R +  NT  +  LI   C+ G L++A ++L  M  S ++ PN 
Sbjct: 230 KRVDNGMEI--FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA-PNY 286

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           IT+ +++  LC     R+A  + E++  K ++ P
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILEDL-QKSEVCP 319


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 176/314 (56%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN  I+  LI  +CK G L +AF +  EM    +S PN  T++ LI GLC   R  EA
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS-PNTYTFTALISGLCHANRMAEA 514

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF EMV  + ++P+ +TYNVLI+G C+ G   RA ++++ M   G  P+ + Y  L++
Sbjct: 515 NKLFGEMVEWN-VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLIS 573

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  G++ EA+E  ++++    K + + ++ L++ +C+ GR+D+AL+  +EM  RG   
Sbjct: 574 GLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAM 633

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V +++++ G+ R+      + +L+++   G+  +   Y  +++ + + G L+ A  L 
Sbjct: 634 DLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLW 693

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            +M+  G LP+  T   L+  LCK G+ + A +    ++     P  +++A  ++ +   
Sbjct: 694 DIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSE 753

Query: 498 RKLLFAFELLDELV 511
             +  A +L D L+
Sbjct: 754 GNIEKAIQLHDVLL 767



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 237/506 (46%), Gaps = 60/506 (11%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H     LI+   + + AL  FN +   K F+H+  ++  ++  L +   +    ++L+ +
Sbjct: 60  HHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTL 119

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERV-LEMFHKIHPITREK----------------P 164
                   EG+F + +  +  C+    +  ++  + +   R +                P
Sbjct: 120 LLRGLN-PEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILP 178

Query: 165 SLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
            ++ +S  LN LI   Q  +A + F +  +  LR  P+  ++  +++  C+      A E
Sbjct: 179 QIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLR--PDVYVYTAVVRSLCELKDFIRARE 236

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL----------------------- 260
           V+  M+ S     ++ TY+  I GLCKN R  EA+E+                       
Sbjct: 237 VIGRMESSGCDL-SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295

Query: 261 --FEEMVSKDQIL---------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
              EE  + ++++         P     + L+DG  + G +  A  ++  +K  G  P++
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           F Y  L+N  CK+GKL EA+ +F+ M +  L P+ + Y+ LI+ FC+ G++D AL  L +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M E G KA +  ++ ++ G C+ GK+  A  + +++  +G+  N   Y  +++  C++GE
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG-MAEDAAIALFG-LVEMGFKPESDSW 487
           L  A  L   M  +G  P+  T   L+  LC A  MAE  A  LFG +VE    P   ++
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE--ANKLFGEMVEWNVIPNEVTY 533

Query: 488 ALLVELICRGRKLLFAFELLDELVIK 513
            +L+E  C+    + AFELLDE+V K
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEK 559



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 200/398 (50%), Gaps = 9/398 (2%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           ++ + AL +F+ +    G   +   Y  ++  L   K F     V+ +M    C      
Sbjct: 194 RQFRMALHLFDEIV-SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVAT 252

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           +   ++       ++RV E   +I  +   K     + T   L++   +V+  +   +  
Sbjct: 253 YNVFIRGLCK---NQRVWEAV-EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308

Query: 193 NQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           N+ +     P+    + L+    K+G + SAF+++ ++KK  ++ P+L  Y+ LI+ +CK
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA-PSLFVYNALINSMCK 367

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           +G+  EA  LF  M  K  + P+ +TY++LID FC+ GK+D A   +  M   G    V+
Sbjct: 368 DGKLDEAESLFNNMGHKG-LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y++L++G CK GKL+ AK +FDEM    LKP+ + YT+LI+ +C+ G +  A  L  EM
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             +G   +  TF  ++ GLC   ++ EA  +  ++    +  N+ +Y +++   C++G  
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            +A ELL  M+ +G +P   T   L+  LC  G   +A
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 200/428 (46%), Gaps = 14/428 (3%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E E   A  +++ ++  KG + N  T+  ++  L    +    + +  +M       +E 
Sbjct: 473 EGELHNAFRLYHEMT-GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNF 188
            +  L++         R  E+  ++     EK   P        ++ L  + +V  A+ F
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEM----VEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           +    Q  + K N   F+ L+  +CK G L+ A +  +EM    ++  +L+ YS LI G+
Sbjct: 588 MN-DLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAM-DLVCYSVLIYGI 645

Query: 249 CKNGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            +    R  I+L ++M   DQ L PD + Y  +ID   + G +  A  + + M + GC P
Sbjct: 646 LRQQDRRSIIDLLKQM--HDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLP 703

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           NV  YT L+NG CK G + +A+ +  EM      P+   Y   ++     G +++A++L 
Sbjct: 704 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 763

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             + E G  A+ VT+NI++ G C+ G+I+EA  +L  +   GI  +  SY  ++   C++
Sbjct: 764 DVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 822

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G+L++AI+L   ML RG  P     N L+   C  G    A      ++  G KP   ++
Sbjct: 823 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 882

Query: 488 ALLVELIC 495
             L+   C
Sbjct: 883 NSLIHGTC 890



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 156/325 (48%), Gaps = 6/325 (1%)

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           +N L Y      L+ +   +  L+   CK    E+  E++ EM +     P+    S L+
Sbjct: 273 KNLLSYKG----LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF-VPSEAAVSNLV 327

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           DGL K G    A +L  + V K  + P    YN LI+  C+ GK+D A+ +   M + G 
Sbjct: 328 DGLRKKGNIGSAFDLVNK-VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGL 386

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            PN   Y+ L++ FCK GKL  A     +M    +K     Y++LI+  C+ G++  A  
Sbjct: 387 FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKS 446

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L  EM   G K ++V +  ++ G C+EG++  A  +  ++   GI  N  ++  +++  C
Sbjct: 447 LFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLC 506

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
               + +A +L   M+    +P+  T N L+   CK G    A   L  +VE G  P++ 
Sbjct: 507 HANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTY 566

Query: 486 SWALLVELICRGRKLLFAFELLDEL 510
           ++  L+  +C   ++  A E +++L
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDL 591


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 185/345 (53%), Gaps = 7/345 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESA 221
           P  K  +  +  +I S ++  A+N     ++ LR  + P    FN L+   CK   L SA
Sbjct: 242 PEAKQFNMLMRDMIRSGKLASARNMF---DEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +   M K+ ++ P++ TY   + GLCK GR ++A+E+FEEM  +  + P+ + +  LI
Sbjct: 299 NALRGLMAKAGVA-PDVYTYGAFMQGLCKAGRIQDAVEMFEEMRER-GVNPNTVVFTTLI 356

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C+ G V    ++   M   G   ++  Y  L NG C+   L+ A ++ +EM+N  LK
Sbjct: 357 DAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLK 416

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + YTTLI+ FC+ G +D A+E+ +EM + G   D VT+  ++ GL + G+  ++  +
Sbjct: 417 PDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERI 476

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L ++   G+  +  +Y +V++  C+  +++   +LL+ M  +G  P   T N ++   C 
Sbjct: 477 LCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCI 536

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            G  ++A + L  ++ +G  P+  ++ +L++  C+  K+  A EL
Sbjct: 537 LGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 157/275 (57%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    ++ L+  + ++G+   A  +F+EM+ +  + P  +T+N L+ G C+   ++ A  
Sbjct: 242 PEAKQFNMLMRDMIRSGKLASARNMFDEMLRR-GVPPTVVTFNTLMSGMCKASDLNSANA 300

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M   G  P+V+ Y   M G CK G++Q+A E+F+EM+   + P+T+ +TTLI+  C
Sbjct: 301 LRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHC 360

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G V   LEL +EM  RG K D+V +N +  GLCR   ++ A  ++E++  +G+  +K 
Sbjct: 361 KEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKV 420

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++GEL+ A+E+ + M   G      T   L+  L K+G + D+   L  +
Sbjct: 421 TYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEM 480

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E G +P++ ++ ++++  C+   +   F+LL E+
Sbjct: 481 MEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEM 515



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 101/209 (48%)

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           + G  P    +  LM    + GKL  A+ +FDEM    + P  + + TL++  C+A  ++
Sbjct: 237 DAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLN 296

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  L   M + G   D+ T+   + GLC+ G+I++A+ M E++   G+  N   +  ++
Sbjct: 297 SANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLI 356

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C++G +   +EL R M  RG        N L   LC+    + A   +  +   G K
Sbjct: 357 DAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLK 416

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
           P+  ++  L++  C+  +L  A E+  E+
Sbjct: 417 PDKVTYTTLIDGFCKEGELDMAMEMKQEM 445



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 3/167 (1%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           ++ L+N   R   V EA     ++ + G   +   FN+++  + R GK+  A  M +++ 
Sbjct: 215 WSDLMN---RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEML 271

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+     ++  +++  C+  +L  A  L  LM   G  P   T    +  LCKAG  +
Sbjct: 272 RRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQ 331

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           DA      + E G  P +  +  L++  C+   +    EL  E+  +
Sbjct: 332 DAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATR 378


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 188/352 (53%), Gaps = 5/352 (1%)

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           +++    C    + LE F     +   +P + + +T +N L +  +VD A +  +     
Sbjct: 16  ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              +PN   +N L+   CK+  L++A  V+ E +K   + P+++TY+TL+  L + GR  
Sbjct: 76  GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFA-PDVVTYNTLMAALFQLGRVD 134

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA+  F +M +++  +P  +++N +I G CR  ++  A ++   M +   +PN+  Y+ +
Sbjct: 135 EALATFTQM-TEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVV 193

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CK  +L EA+++ D M +   +PD + YT L+  F  AGR+D AL LL+ M  +GC
Sbjct: 194 IDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGC 253

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VT+ +++  LC+ G++++A  +  +L  +    N  +Y  ++   C+   +++  +
Sbjct: 254 IPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGK 313

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           ++R M CR   P+  T N ++  L      E+A      + E GF P++ ++
Sbjct: 314 VMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 169/309 (54%), Gaps = 2/309 (0%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           +I+++  C+ G +  A E      +   + P++++Y+TLI+GLCK GR   A +LF +MV
Sbjct: 14  SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 73

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +     P+A TYN L+DG C+  ++D A+ ++   +     P+V  Y TLM    + G++
Sbjct: 74  AAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRV 133

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EA   F +M      P  + +  +I   CRA R+ +ALE+  EM +R    ++VT++++
Sbjct: 134 DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVV 193

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYR-IVLNFSCQKGELEKAIELLRLMLCRG 444
           + GLC+  +++EA  +L+++  +G   +  +Y  +VL FS   G L+ A+ LLR M+ +G
Sbjct: 194 IDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS-AAGRLDSALGLLRRMVSQG 252

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +P   T   ++ +LCK G  +DA      LV     P   +++ L+   CR  ++    
Sbjct: 253 CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG 312

Query: 505 ELLDELVIK 513
           +++ E+  +
Sbjct: 313 KVMREMACR 321



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 163/325 (50%), Gaps = 4/325 (1%)

Query: 167 KAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           +  S  L  L    +V  A      S +    +P+   +  LI   CK G +++AF++ +
Sbjct: 11  RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 70

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
           +M  +    PN  TY+ L+DGLCK  R   A  +  E   +D   PD +TYN L+    +
Sbjct: 71  KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRD-FAPDVVTYNTLMAALFQ 129

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G+VD A      M   G  P + ++  ++ G C+  +L +A EVF+EM +    P+ + 
Sbjct: 130 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 189

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y+ +I+  C++ ++DEA +LL  M   GC+ D+V +  ++ G    G+++ ALG+L ++ 
Sbjct: 190 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G   +  +Y +V++  C+ G ++ A E+ R ++     P+  T + L+   C+A   +
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 309

Query: 467 DAAIALFGLVEMGFKPESDSWALLV 491
           +    +    EM  +P   ++  ++
Sbjct: 310 EGGKVMR---EMACRPNVVTYNTMI 331



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 145/273 (53%), Gaps = 1/273 (0%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T S ++ GLC+ GR  +A+E F+  +      PD ++Y  LI+G C+ G+VD A  +   
Sbjct: 12  TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71

Query: 300 M-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
           M    GC PN F Y  L++G CK+ +L  A+ V  E +     PD + Y TL+    + G
Sbjct: 72  MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           RVDEAL    +M E G    +V+FN I+ GLCR  ++ +AL +  ++     + N  +Y 
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           +V++  C+  +L++A +LL  M+  G  P       L++    AG  + A   L  +V  
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 251

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G  P+  ++ ++++ +C+  ++  A E+  ELV
Sbjct: 252 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELV 284



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 17/357 (4%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET- 125
            L +C +  Q ALE F+   E      +  +Y T+++ L +  + +A   + R+M     
Sbjct: 19  GLCRCGRVAQ-ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG 77

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQV 182
           C+ +   +  L+         +R L+    +    R++   P +   +T +  L +  +V
Sbjct: 78  CRPNAFTYNALVDGLCK---QDR-LDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRV 133

Query: 183 DLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           D A   F + + +     P    FN +I   C+   L  A EV  EM      +PNL+TY
Sbjct: 134 DEALATFTQMTEEGY--VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF-HPNLVTY 190

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S +IDGLCK+ +  EA +L + MVS +   PD + Y  L+ GF   G++D A  ++  M 
Sbjct: 191 SVVIDGLCKSDQLDEAQQLLDRMVS-EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           + GC P+V  YT +++  CK G++ +A E+F E+      P+ + Y+ LI  +CRA RVD
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 309

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           E  ++++EM    C+ ++VT+N ++ GL    + EEA GM  ++   G   +  +YR
Sbjct: 310 EGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 363



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 9/266 (3%)

Query: 86  SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           + ++ F  +  TY T++  L +  + +   A   QMT E        F  ++        
Sbjct: 108 ARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARR 167

Query: 146 HERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
               LE+F+++  I R+  P+L   S  ++ L +S+Q+D AQ  L         +P+   
Sbjct: 168 LADALEVFNEM--IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE-GCRPDLVA 224

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  L+      G L+SA  +L+ M  SQ   P+++TY+ +ID LCK GR  +A E+F E+
Sbjct: 225 YTPLVLGFSAAGRLDSALGLLRRMV-SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL 283

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V+ ++  P+ +TY+ LI G+CR  +VD   K+M  M    C PNV  Y T++ G     +
Sbjct: 284 VA-NKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDR 339

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTL 350
            +EA  +F EM      PD   Y  L
Sbjct: 340 NEEAYGMFREMSECGFVPDARTYRGL 365



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 113/214 (52%), Gaps = 2/214 (0%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD-EMKNFLLKPDTIGYTTLINCFCRAG 358
           M   G   N    + ++ G C+ G++ +A E FD  ++    +PD + YTTLIN  C+ G
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 359 RVDEALELLKEM-KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           RVD A +L ++M    GC+ +  T+N ++ GLC++ +++ A  ++ +        +  +Y
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++    Q G +++A+     M   G++P   + N ++  LC+A    DA      +++
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             F P   +++++++ +C+  +L  A +LLD +V
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 214



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 2/169 (1%)

Query: 348 TTLINCFCRAGRVDEALELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKL- 405
           + ++   CR GRV +ALE      E    + D+V++  ++ GLC+ G+++ A  +  K+ 
Sbjct: 14  SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 73

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G   N  +Y  +++  C++  L+ A  ++     R F P   T N L+  L + G  
Sbjct: 74  AAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRV 133

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           ++A      + E G+ P   S+  ++  +CR R+L  A E+ +E++ ++
Sbjct: 134 DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 182


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 152/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F++   M  S +  P++ TYS LI+GLCK  +   A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVX-PDVYTYSVLINGLCKESKMDXA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L +A ++ DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  M+ ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 411 KEMQXDGHAPSVVTYNVLM 429



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L    CK G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILXHRFCKEGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             K+   M  +G  P+V+ Y+ L+NG CKE K+  A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G + +A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   +
Sbjct: 316 DKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMM 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++  +C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEM 413



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 152/261 (58%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     + P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 NELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G +++A  +++ M   G  P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++++EM   G K D  T+ +I+  +C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQXDGHAPSVVTYNVLMN 430



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 129/227 (56%), Gaps = 7/227 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLESA 221
           P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ A
Sbjct: 210 PDVYTYSVLINGLCKESKMDXANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+ K+M  SQ   P+LITY+TLI GLCK G   +A +L +EM S   + PD +TY  LI
Sbjct: 267 MEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEM-SMKGLKPDKITYTTLI 324

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  LK
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLK 384

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           PDT  YT +IN  C+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 385 PDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 140/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+A+E +         LP  
Sbjct: 51  KGSASAVFAAILETKGNQRS--DIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFD 108

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF             EF++  G   +++ +  L + FCKEG
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYE-----------EFLEC-GYPASLYFFNILXHRFCKEG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  +L   M   G   D+ T++
Sbjct: 157 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K++ A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 217 VLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G                                    L  A
Sbjct: 277 SLLPDLITYNTLIYGLCKKG-----------------------------------DLNQA 301

Query: 504 FELLDELVIK 513
            +L+DE+ +K
Sbjct: 302 HDLIDEMSMK 311


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 165/287 (57%), Gaps = 3/287 (1%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R   SL   +  ++   +  ++ LAQ+      +   L+P+   FN L+  + K G L+ 
Sbjct: 131 RYPASLYFFNILMDRFCKEGEIRLAQSVFDGITK-WGLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
            F +   M  S +  P++ TYS LI+GLCK  +  EA +LF+EM+ +  ++P+ +T+  L
Sbjct: 190 GFRLKSAMHASGVQ-PDVYTYSVLINGLCKESKMDEAHKLFDEMLDRG-LVPNGVTFTTL 247

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ GK+D A +I + M + G +P+   Y TL+ G CK+G L +AK++ DEM    L
Sbjct: 248 IDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGL 307

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           KPD I YTTLI+  C+ G ++ A E  K M +   + D V++  ++ GLC+EG+  +A  
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEK 367

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           ML ++   G+  +  +Y IV++  C+ G+++   +LL+ M   G +P
Sbjct: 368 MLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVP 414



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 163/277 (58%), Gaps = 2/277 (0%)

Query: 235 YP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           YP +L  ++ L+D  CK G  R A  +F+  ++K  + P  +++N L++G+ + G +D  
Sbjct: 132 YPASLYFFNILMDRFCKEGEIRLAQSVFDG-ITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
            ++   M  +G  P+V+ Y+ L+NG CKE K+ EA ++FDEM +  L P+ + +TTLI+ 
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDG 250

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+ G++D A+E+ K+M  +G   D +T+N ++ GLC++G + +A  + +++   G+  +
Sbjct: 251 HCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPD 310

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
           K +Y  +++ SC++G+LE A E  + M+         +   L+  LCK G + DA   L 
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLR 370

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 371 EMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEM 407



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 124/221 (56%), Gaps = 7/221 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G L+ 
Sbjct: 203 QPDVYTYSVLINGLCKESKMDEAHKLF---DEMLDRGLVPNGVTFTTLIDGHCKNGKLDL 259

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+ ITY+TLI GLCK G   +A +L +EM  K  + PD +TY  L
Sbjct: 260 AMEIYKQML-SQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKG-LKPDKITYTTL 317

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G ++ A +  + M       +  +YT L++G CKEG+  +A+++  EM +  L
Sbjct: 318 IDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGL 377

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           KPDT  YT +++ FC+ G V    +LLKEM+  G    ++T
Sbjct: 378 KPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 151/300 (50%), Gaps = 9/300 (3%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           + +  + F  + E K +Q S  ++  +S LI    ++G  R+AIE F         +P  
Sbjct: 45  KDSASAVFATILETKGAQRS--DIYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFD 102

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCN--PNVFNYTTLMNGFCKEGKLQEAKEV 331
               VL        K+   K +  F K    C    +++ +  LM+ FCKEG+++ A+ V
Sbjct: 103 TCRKVLEHLM----KLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSV 158

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD +  + L+P  + + TL+N + + G +DE   L   M   G + D+ T+++++ GLC+
Sbjct: 159 FDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCK 218

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           E K++EA  + +++   G+  N  ++  +++  C+ G+L+ A+E+ + ML +GF P   T
Sbjct: 219 ESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXIT 278

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+  LCK G    A      +   G KP+  ++  L++  C+   L  AFE    ++
Sbjct: 279 YNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMI 338


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 166/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G +P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 2/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI  +C+ G LE AFE++  M    +  P+L TY+ +I+GLCK GR+  A  +  EM
Sbjct: 4   YNTLIGAYCREGLLEEAFEIMNSMADKGLK-PSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           ++   + PD  TYN L+   CR      AK+I   M   G  P++ ++++LM  F +   
Sbjct: 63  LNI-GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F +MK F L PD + YT L++ +CR G + EAL++  EM E+GC  D++ +N 
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           IL GLC+E  + +A  + +++   G   +  ++  +++  CQ G + KA+ L   M  R 
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P     N L+   CK G  E A+    G++     P   ++ +L+   C    +  AF
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 505 ELLDELVIK 513
            L D ++ K
Sbjct: 302 RLWDVMIEK 310



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 174/329 (52%), Gaps = 3/329 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KPSL   +  +N L +  +   A+  L     ++ L P+T  +N L+   C+R     A 
Sbjct: 33  KPSLFTYNAIINGLCKKGRYARAKGIL-IEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 91

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+  EM + Q   P+L+++S+L+    +N    +A+  F +M  K  ++PD + Y VL+ 
Sbjct: 92  EIFGEMLR-QGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDM-KKFGLVPDNVIYTVLMH 149

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+CR G +  A KI + M   GC  +V  Y T++NG CKE  L +A ++FDEM      P
Sbjct: 150 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP 209

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   +TTLI+  C+ G + +AL L   M +R  K DIV +N ++ G C+ G++E+A  + 
Sbjct: 210 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 269

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           + +    I+ N  +Y I++N  C  G + +A  L  +M+ +G  P   T N ++   C++
Sbjct: 270 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 329

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLV 491
           G +  A   L  ++  G  P+  S+  L+
Sbjct: 330 GDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 9/347 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI N++++ KG   +  TY  I++ L +  ++     +L +M           +  L+
Sbjct: 20  AFEIMNSMAD-KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 78

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                        E+F ++    R+   P L + S+ + +   +  +D A  + +   + 
Sbjct: 79  VESCRRDNFSEAKEIFGEM---LRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFR-DMKK 134

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L P+  I+ +L+  +C+ G +  A ++  EM + Q    ++I Y+T+++GLCK     
Sbjct: 135 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE-QGCVLDVIAYNTILNGLCKEKMLT 193

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A +LF+EMV +   LPD  T+  LI G C+ G + +A  +   M      P++  Y TL
Sbjct: 194 DADKLFDEMVERGA-LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTL 252

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++GFCK G++++A E++D M +  + P+ I Y  LIN +C  G V EA  L   M E+G 
Sbjct: 253 IDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGI 312

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           K  +VT N ++ G CR G   +A   L ++   G+  +  SY  ++N
Sbjct: 313 KPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 149/256 (58%), Gaps = 2/256 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  +I   CK G  ESA  +L +M+++ +   +++ Y+ +ID LCK+G    A  LF EM
Sbjct: 44  YGTIINGLCKMGDTESALNLLSKMEETHIK-AHVVIYNAIIDRLCKDGHHIHAQNLFTEM 102

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             K  I PD +TY+ +ID FCR G+   A++++  M     NP+V  ++ L+N   KEGK
Sbjct: 103 HDK-GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA+E++ +M    + P TI Y ++I+ FC+  R+++A  +L  M  + C  D+VTF+ 
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+  +++  + +  ++   GI  N  +Y  +++  CQ G+L+ A +LL +M+  G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281

Query: 445 FLPHYATSNELLVRLC 460
             P+Y T   +L  LC
Sbjct: 282 VAPNYITFQSMLASLC 297



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 7/291 (2%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFN 206
           RVL+    +  +  E    +   T +N L +    + A N L K    H+  K +  I+N
Sbjct: 25  RVLQALALVDRMVEEGH--QPYGTIINGLCKMGDTESALNLLSKMEETHI--KAHVVIYN 80

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G    A  +  EM    + +P++ITYS +ID  C++GR+ +A +L  +M+ 
Sbjct: 81  AIIDRLCKDGHHIHAQNLFTEMHDKGI-FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           + QI PD +T++ LI+   + GKV  A++I   M   G  P    Y ++++GFCK+ +L 
Sbjct: 140 R-QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +AK + D M +    PD + ++TLIN +C+A RVD  +E+  EM  RG  A+ VT+  ++
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            G C+ G ++ A  +L  +   G+  N  +++ +L   C K EL KA  +L
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 142/276 (51%), Gaps = 5/276 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+++T++TL++GLC  GR  +A+ L + MV +         Y  +I+G C+ G  + A  
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH-----QPYGTIINGLCKMGDTESALN 62

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M+      +V  Y  +++  CK+G    A+ +F EM +  + PD I Y+ +I+ FC
Sbjct: 63  LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R+GR  +A +LL++M ER    D+VTF+ ++  L +EGK+ EA  +   +   GI+    
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++  L  A  +L  M  +   P   T + L+   CKA   ++       +
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              G    + ++  L+   C+   L  A +LL+ ++
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 147/305 (48%), Gaps = 15/305 (4%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           CE     AL + + + E+      +  Y TI++ L +    E+   +L +M     K H 
Sbjct: 22  CEGRVLQALALVDRMVEE-----GHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHV 76

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQN 187
            I+  ++        H     +F ++H    +K   P +   S  ++    S +   A+ 
Sbjct: 77  VIYNAIIDRLCKDGHHIHAQNLFTEMH----DKGIFPDVITYSGMIDSFCRSGRWTDAEQ 132

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            L+   +  ++ P+   F+ LI    K G +  A E+  +M +  + +P  ITY+++IDG
Sbjct: 133 LLRDMIER-QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI-FPTTITYNSMIDG 190

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            CK  R  +A  + + M SK    PD +T++ LI+G+C+  +VD   +I   M   G   
Sbjct: 191 FCKQDRLNDAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 249

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N   YTTL++GFC+ G L  A+++ + M +  + P+ I + +++   C    + +A  +L
Sbjct: 250 NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309

Query: 368 KEMKE 372
           +++++
Sbjct: 310 EDLQK 314



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 4/214 (1%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC P+V  +TTLMNG C EG++ +A  + D M     +P    Y T+IN  C+ G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            + AL LL +M+E   KA +V +N I+  LC++G    A  +  ++   GI+ +  +Y  
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G    A +LLR M+ R   P   T + L+  L K G   +A      ++  G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P + ++  +++  C+  +L  A  +LD +  K
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 4/145 (2%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M E GC+ D+VTF  ++ GLC EG++ +AL +++++  +G       Y  ++N  C+ G+
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGD 56

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            E A+ LL  M       H    N ++ RLCK G    A      + + G  P+  +++ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 490 LVELICRGRKLLFAFELLDELVIKE 514
           +++  CR  +   A +LL +++ ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQ 141


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 194/336 (57%), Gaps = 7/336 (2%)

Query: 177 IESNQVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           +ES  V  A    + + QH +R+  +TC    +++H  +    +  ++  KE+   +  Y
Sbjct: 77  LESGFVRDAVQCFRLTKQHKIRVPFDTC--RKVLEHLMEFRYFKLVWDFYKEV--LECGY 132

Query: 236 P-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           P +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N LI+G+ + G +D   
Sbjct: 133 PASLYFFNILMQRFCKEGEMRLAQSVFDA-ITKWGLRPSVVSFNTLINGYIKLGDLDEGF 191

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           ++   M  +G  P+V+ Y+ L+NG CKEGKL EA E+F+EM +  L P+ + +TTLI+  
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+  +VD A+E+ K+M  +G   D++T+N ++ GLC++G++++   +++++  +G+  +K
Sbjct: 252 CKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            SY  +++ SC++G+LE A+EL   M+             L+  LC+ G A DA   L  
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLRE 371

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           ++ +G KP++ ++ +++   C+ R    A +LL E+
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREM 407



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN LI  + K G L+  F +   M  S  + P++ TYS LI+GLCK G+  EA
Sbjct: 167 LRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASG-AQPDVYTYSILINGLCKEGKLDEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF EM+  + ++P+ +T+  LI G C+  KVD A +I + M + G +P++  Y TL+ 
Sbjct: 226 NELFNEMLD-NGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G+L++  ++ DEM    LKPD I YTTLI+  C+ G ++ ALEL  +M +   + 
Sbjct: 285 GLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++  LCREG+  +A  ML ++   G+  +  +Y +++N  C+K + + A +LL
Sbjct: 345 DDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLL 404

Query: 438 RLMLCRGFLPHYAT 451
           R M   G LP   T
Sbjct: 405 REMQRDGPLPGVVT 418



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 152/300 (50%), Gaps = 9/300 (3%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           + +    FE + E K +Q S  +   +S L+    ++G  R+A++ F         +P  
Sbjct: 45  KDSASDVFEAILETKGTQRS--DFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFD 102

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
               VL        +    K + +F K     G   +++ +  LM  FCKEG+++ A+ V
Sbjct: 103 TCRKVLEHLM----EFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSV 158

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD +  + L+P  + + TLIN + + G +DE   L   M   G + D+ T++I++ GLC+
Sbjct: 159 FDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCK 218

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           EGK++EA  +  ++  +G+  N  ++  +++  C+  +++ A+E+ + ML +G  P   T
Sbjct: 219 EGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLIT 278

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+  LCK G  +     +  ++  G KP+  S+  L++  C+   L  A EL ++++
Sbjct: 279 YNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMI 338



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 83/166 (50%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           +  L+  FC+ G +  A  +   + + G +  +V+FN ++ G  + G ++E   +   + 
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G   +  +Y I++N  C++G+L++A EL   ML  G +P+  T   L+   CK    +
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
            A      ++  G  P+  ++  L+  +C+  +L    +L+DE+++
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIM 304


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 223/436 (51%), Gaps = 4/436 (0%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A + F  V  Q+G   +     T+++ L   ++F   + VL ++          IF+ L 
Sbjct: 2   AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELA 61

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           + +++  L E+ +E   ++    R   +  A ++ ++  +++     A    +   Q   
Sbjct: 62  RGYASAGLLEKSVEALKRMEG-HRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQS-G 119

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+T  FN+L+    K   ++S +++ +EM+    S PN+ITYS LID +CK G   +A
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCS-PNVITYSILIDAVCKCGGVEKA 178

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +++F +M S+    P+  TY  +IDG  + G VD+A  + E M + G       Y +L++
Sbjct: 179 LKVFLDMKSRG-CRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIH 237

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  + G+   A ++F EM +  L+PD + +T+L+     AGR  EA  + +E ++ GC  
Sbjct: 238 GLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCAL 297

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+  +N+++  LC+  +++EA  +  +L  DG+  +  ++  +++  C+ G +  A  LL
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P     N L+  L K+G  E+A   L  +  +G++P+  ++  L++  C+G
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417

Query: 498 RKLLFAFELLDELVIK 513
            ++  A  L +E+  K
Sbjct: 418 GRIEDALRLFEEISAK 433



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 190/387 (49%), Gaps = 42/387 (10%)

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
           L++M    C      + +L+  F      ++ L ++ ++   +  +P     +  +N   
Sbjct: 77  LKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY-RVMGQSGLRPDTYTFNVLMNAFK 135

Query: 178 ESNQVD-LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           ++ +VD + + F +  NQ+    PN   ++ILI   CK G +E A +V  +MK S+   P
Sbjct: 136 KAKRVDSVWKLFEEMQNQNC--SPNVITYSILIDAVCKCGGVEKALKVFLDMK-SRGCRP 192

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N+ TY+++IDGL K+G   +A  LFEEM S + ++   + YN LI G  R G+ D A K+
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTS-EGLVATRVVYNSLIHGLGRSGRADAAAKL 251

Query: 297 MEFMKNNGCNPNVFNYTTLMNGF-----------------------------------CK 321
              M + G  P+   +T+L+ G                                    CK
Sbjct: 252 FREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCK 311

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             +L EA E+F E++   L PD   +  L++  C++GR+ +A  LL +MK  GC  D+  
Sbjct: 312 SKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTV 371

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N ++ GL + G++EEA  +L ++   G   +  +Y  +++ SC+ G +E A+ L   + 
Sbjct: 372 YNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEIS 431

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDA 468
            +GF  +  T N +L  LC AG  ++A
Sbjct: 432 AKGF-ANTVTYNTILNGLCMAGRVDEA 457



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 164/327 (50%), Gaps = 14/327 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F  + + +G   N  TY +++D L +    +    +  +MT E       ++ +L+
Sbjct: 178 ALKVFLDM-KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLI 236

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    +   ++F ++     +   +   S    L +     +  + F +  +    
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCA 296

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  N  ++N+LI   CK   L+ A+E+  E+++  +  P++ T++ L+DGLCK+GR  +A
Sbjct: 297 LDVN--LYNVLIDTLCKSKRLDEAWEIFGELEEDGL-VPDVYTFNALMDGLCKSGRIHDA 353

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L  +M  +    PD   YN LIDG  + G+V+ A +++  M++ G  P+V  Y TL++
Sbjct: 354 FILLGDM-KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412

Query: 318 GFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
             CK G++++A  +F+E+  K F    +T+ Y T++N  C AGRVDEA +L   MK+   
Sbjct: 413 ESCKGGRIEDALRLFEEISAKGF---ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETV 469

Query: 376 KA----DIVTFNIILGGLCREGKIEEA 398
                 D VT+  +L G  + G  E A
Sbjct: 470 DGVIDPDFVTYTTLLNGARQAGLSELA 496


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 179/339 (52%), Gaps = 4/339 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++    T +N L +      A   L+ S +    +P+  I+  +I   CK   +  AF
Sbjct: 167 QPNVVTYGTLINGLCKVGNTSAAIRLLR-SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  +M    +S P++ TY++L+  LC    ++    L  +MV+  +ILPD + ++ ++D
Sbjct: 226 NLFSQMVGQGIS-PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS-KILPDVVIFSTVVD 283

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+ GKV  A +I++ M   G  P+V  YTTLM+G C + ++ EA +VFD M      P
Sbjct: 284 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 343

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D I YTTLIN +C+  ++D+A+ L +EM  +    D  T+N ++ GLC  G++++A+ + 
Sbjct: 344 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALF 403

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   G   +  +Y I+L+  C+   LE+A+ LL+ +      P     N ++  +C+A
Sbjct: 404 HEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA 463

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
           G  E A      L   G  P   ++ +++  +C+ R LL
Sbjct: 464 GELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK-RGLL 501



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 206/417 (49%), Gaps = 25/417 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ + ++ GF  N  TY T+++ L +     A   +LR M    C+    I+ +++
Sbjct: 154 ALHLFDKMIDE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSII 212

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                         +F ++    I+ +  +  ++   L  L E   V    N +  S   
Sbjct: 213 DSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS--- 269

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            ++ P+  IF+ ++   CK G +  A E++  M +  +  P+++TY+TL+DG C      
Sbjct: 270 -KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE-PDVVTYTTLMDGHCLQSEMD 327

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA+++F+ MV K    PD ++Y  LI+G+C+  K+D+A  + E M      P+   Y TL
Sbjct: 328 EAVKVFDMMVRKG-FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M G C  G+LQ+A  +F EM      PD + Y+ L++  C+   ++EA+ LLK ++    
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             DI  +NII+ G+CR G++E A  +   L   G++ +  +Y I+++  C++G L +A +
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506

Query: 436 LLRLM--------------LCRGFLPHYAT--SNELLVRLCKAGMAEDAAIALFGLV 476
           L   M              + RGFL +  T  + +LL  +   G + D+   +  ++
Sbjct: 507 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFLMLSVL 563



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 204/423 (48%), Gaps = 18/423 (4%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNC----SLHERVL 150
           +A +L  +A+ K +  V ++  QM         +   I +N   H +      S+  ++L
Sbjct: 68  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 127

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
           ++ H+  P T         +    L +E    +    F K  ++    +PN   +  LI 
Sbjct: 128 KLGHQPDPTT-------FTTLIRGLCVEGKIGEALHLFDKMIDEGF--QPNVVTYGTLIN 178

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             CK G   +A  +L+ M++     P+++ Y+++ID LCK+ +  EA  LF +MV +  I
Sbjct: 179 GLCKVGNTSAAIRLLRSMEQGNCQ-PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG-I 236

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PD  TY  L+   C   +      ++  M N+   P+V  ++T+++  CKEGK+ EA E
Sbjct: 237 SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 296

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + D M    ++PD + YTTL++  C    +DEA+++   M  +G   D++++  ++ G C
Sbjct: 297 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYC 356

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           +  KI++A+ + E++       +  +Y  ++   C  G L+ AI L   M+ RG +P   
Sbjct: 357 KIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLV 416

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T + LL  LCK    E+A   L  +      P+   + ++++ +CR  +L  A +L   L
Sbjct: 417 TYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL 476

Query: 511 VIK 513
             K
Sbjct: 477 SSK 479



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 2/320 (0%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H+   P+   F  L+    K     +   +  +M    +  PN+ T + LI+  C   R 
Sbjct: 58  HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVP-PNVYTLNILINSFCHLNRV 116

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A  +  +++      PD  T+  LI G C  GK+  A  + + M + G  PNV  Y T
Sbjct: 117 GFAFSVLAKILKLGH-QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGT 175

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG CK G    A  +   M+    +PD + YT++I+  C+  +V EA  L  +M  +G
Sbjct: 176 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 235

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI T+  ++  LC   + +    +L ++    I  +   +  V++  C++G++ +A 
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           E++ +M+ RG  P   T   L+   C     ++A      +V  GF P+  S+  L+   
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355

Query: 495 CRGRKLLFAFELLDELVIKE 514
           C+  K+  A  L +E+  KE
Sbjct: 356 CKIHKIDKAMYLFEEMCRKE 375



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 2/188 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F+ + +    P  + +  L+    +       L L  +M   G   ++ T NI
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   ++  A  +L K+   G   +  ++  ++   C +G++ +A+ L   M+  G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF-KPESDSWALLVELICRGRKLLFA 503
           F P+  T   L+  LCK G    AAI L   +E G  +P+   +  +++ +C+ R++  A
Sbjct: 166 FQPNVVTYGTLINGLCKVGNT-SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 224

Query: 504 FELLDELV 511
           F L  ++V
Sbjct: 225 FNLFSQMV 232


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 173/318 (54%), Gaps = 2/318 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           LR  P+    + L++   KRG +E A  ++K + +  +S PN+  Y+ LID LCK   F 
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVS-PNIFVYNALIDSLCKGRNFD 384

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA  LF+ M  K  + P+ +TY++LID FCR GK+D A   +  M + G  P+V+ Y +L
Sbjct: 385 EAELLFDRM-GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSL 443

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK G +  A+ +  EM N  L+P  + YT+L+  +C  G++++AL L  EM  +G 
Sbjct: 444 INGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
              I TF  +L GL R G I +A+ +  ++    +  N+ +Y +++   C++G + KA E
Sbjct: 504 VPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFE 563

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            L  M+ +G +P   +   L+  LC  G A +A + + GL +   +     +  L+   C
Sbjct: 564 FLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623

Query: 496 RGRKLLFAFELLDELVIK 513
           R  KL  A  +  ++ ++
Sbjct: 624 REGKLEEALSVCQDMGLR 641



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 223/450 (49%), Gaps = 7/450 (1%)

Query: 51  VDARKRSRFISHGAAIS-LIKCEKEPQCALEIFNTVSE--QKGFNHNNATYATILDKLAR 107
           +D   R RF    AA+S L++  ++     E  N V    + G + N   Y  ++D L +
Sbjct: 320 IDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCK 379

Query: 108 YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK 167
            + F+  + +  +M       ++  +  L+  F      +  L    ++  +   KPS+ 
Sbjct: 380 GRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGL-KPSVY 438

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
             ++ +N   +   +  A++ +     + +L+P    +  L+  +C +G +  A  +  E
Sbjct: 439 PYNSLINGHCKFGDISAAESLMA-EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M    +  P++ T++TL+ GL + G  R+A++LF EM ++  + P+ +TYNV+I+G+C  
Sbjct: 498 MTGKGI-VPSIYTFTTLLSGLFRAGLIRDAVKLFTEM-AEWNVKPNRVTYNVMIEGYCEE 555

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G + +A + +  M   G  P+ ++Y  L++G C  G+  EAK   D +     + + I Y
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T L++ FCR G+++EAL + ++M  RG   D+V + +++ G  +    +  LG+L+++  
Sbjct: 616 TGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHD 675

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  +   Y  +++   + G+ ++A  +  LM+  G +P+  T   ++  LCKAG   +
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRG 497
           A I    +      P   ++   ++++ +G
Sbjct: 736 AEILCSKMRPGNSVPNQVTYGCFLDILTKG 765



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 211/464 (45%), Gaps = 49/464 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLH 146
           G   N+ TY+ ++D   R  K +   + L +M     K   +     +N    F + S  
Sbjct: 397 GLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAA 456

Query: 147 ERVL-EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           E ++ EM +K     + +P++   ++ +       +++ A   L +      + P+   F
Sbjct: 457 ESLMAEMINK-----KLEPTVVTYTSLMGGYCSKGKINKALR-LYHEMTGKGIVPSIYTF 510

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             L+    + G +  A ++  EM +  +  PN +TY+ +I+G C+ G   +A E   EM+
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFTEMAEWNVK-PNRVTYNVMIEGYCEEGNMSKAFEFLNEMI 569

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K  I+PD  +Y  LI G C  G+   AK  ++ +    C  N   YT L++GFC+EGKL
Sbjct: 570 EKG-IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628

Query: 326 QEAKEVFDEM-------------------------KNFL----------LKPDTIGYTTL 350
           +EA  V  +M                         K FL          LKPD + YT++
Sbjct: 629 EEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSM 688

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+   + G   EA  +   M   GC  + VT+  ++ GLC+ G + EA  +  K+     
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNS 748

Query: 411 YLNKASYRIVLNFSCQK-GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
             N+ +Y   L+   +  G+++KA+EL   +L +G L + AT N L+   C+ G  E+A+
Sbjct: 749 VPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEAS 807

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             +  ++  G  P+  ++  ++  +CR   +  A EL + +  K
Sbjct: 808 ELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEK 851



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 225/503 (44%), Gaps = 65/503 (12%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF---------------- 111
           LI    +P+  L  FN +   +GF+H+ A++  ++  L +   F                
Sbjct: 77  LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALK 136

Query: 112 --EAVDAVLRQMTYETCKFHEGIFLNLM-KHFSNCSLHERVLE---MFHKIHPITREKPS 165
             E  DA+     YE CK       +L+ +H+       RVL+   +F  +       P 
Sbjct: 137 PSEVFDALFS--CYEKCKLSSSSSFDLLIQHYVR---SRRVLDGVLVFKMMMTKVSLLPE 191

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           ++ +S  L+ L++     LA         ++ ++P+  I+  +I+  C+   L  A E++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFD-DMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
            +M+ +     N++ Y+ LIDGLCK  +  EA+ + +++  K ++ PD +TY  L+ G C
Sbjct: 251 VQMEATGCDV-NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-ELKPDVVTYCTLVCGLC 308

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           +  + +   ++++ M     +P+    ++L+ G  K GK++EA  +   +  F + P+  
Sbjct: 309 KVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIF 368

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  LI+  C+    DEA  L   M + G   + VT++I++   CR GK++ AL  L ++
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 406 WYDGI-----------------------------YLNK------ASYRIVLNFSCQKGEL 430
              G+                              +NK       +Y  ++   C KG++
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            KA+ L   M  +G +P   T   LL  L +AG+  DA      + E   KP   ++ ++
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           +E  C    +  AFE L+E++ K
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEK 571



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 146/287 (50%), Gaps = 4/287 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +  L+   C+ G LE A  V ++M    +   +L+ Y  LIDG  K+   +  + L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL-DLVCYGVLIDGSLKHKDRKVFLGL 669

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM  +  + PD + Y  +ID   + G    A  I + M N GC PN   YT ++NG C
Sbjct: 670 LKEMHDRG-LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA-GRVDEALELLKEMKERGCKADI 379
           K G + EA+ +  +M+     P+ + Y   ++   +  G + +A+EL   +  +G  A+ 
Sbjct: 729 KAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANT 787

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N+++ G CR+G++EEA  ++ ++  DG+  +  +Y  +++  C++ +++KAIEL   
Sbjct: 788 ATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNS 847

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           M  +G  P     N L+   C AG    A      ++  G KP +++
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 24/315 (7%)

Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
           H  NC L+E        +H   RE    +A+S C ++ +    +DL              
Sbjct: 604 HKGNCELNEICYTGL--LHGFCREGKLEEALSVCQDMGLRGVDLDLV------------- 648

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
                 + +LI    K    +    +LKEM    +  P+ + Y+++ID   K G F+EA 
Sbjct: 649 -----CYGVLIDGSLKHKDRKVFLGLLKEMHDRGLK-PDDVIYTSMIDAKSKTGDFKEAF 702

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +++ M++ +  +P+ +TY  +I+G C+ G V+ A+ +   M+     PN   Y   ++ 
Sbjct: 703 GIWDLMIN-EGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDI 761

Query: 319 FCKE-GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             K  G +++A E+ + +   LL  +T  Y  LI  FCR GR++EA EL+  M   G   
Sbjct: 762 LTKGVGDMKKAVELHNAILKGLL-ANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSP 820

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D +T+  ++  LCR   +++A+ +   +   GI  ++ +Y  +++  C  GE+ KA EL 
Sbjct: 821 DCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880

Query: 438 RLMLCRGFLPHYATS 452
             ML +G  P+  TS
Sbjct: 881 NEMLRQGLKPNTETS 895


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 238/492 (48%), Gaps = 27/492 (5%)

Query: 44  VETSDTCVDA-RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATIL 102
           +ET +   DA  K + F+S      +++ ++ P+     F   + ++ F  +  T+  ++
Sbjct: 45  METVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVI 103

Query: 103 DKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE 162
           D LA+   F+    +L ++     +     F  L+  ++   + E+ +E F K+      
Sbjct: 104 DMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGC- 162

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLES 220
           KP +   ++ L+++++     LA   L   NQ L+L   PN   F IL+   CK G  + 
Sbjct: 163 KPDVFTYNSILHVMVQKEVFLLA---LAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDD 219

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A ++  EM +  +  PN + Y+ ++ GLC+  R  +   L   M       PD++T N L
Sbjct: 220 ALKMFDEMTQKGIP-PNTMIYTIILSGLCQAKRTDDVHRLLNTM-KVSGCCPDSITCNAL 277

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           +DGFC+ G++D A  +++  +  G    +  Y++L++G  +  +  E +E   +M    +
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           +PD + YT LI  FC  G VD AL +L +M +RG   D   +N ++ G C  G +++A  
Sbjct: 338 EPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARS 397

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +  ++  +  +    +Y I++   C+ G L++A ++   M   G  P   T N L+  LC
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLC 457

Query: 461 KAGMAEDAAIALFGLVEMGFKP--------------ESDSWALLVELICRGRKLLFAFEL 506
           KAG  E+A   LF  +E+G  P              ++ S   +VE +C    +L A++L
Sbjct: 458 KAGELEEAR-HLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 507 LDELVIKESGTI 518
           L +L   +SG +
Sbjct: 517 LMQLA--DSGVV 526



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 209/455 (45%), Gaps = 34/455 (7%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E++G+      Y++++D L R K+++ V    R+M     +    ++  L++ F    + 
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMV 357

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNT 202
           +  L M + +      +  L   + C N LI+       +D A++ L+         P +
Sbjct: 358 DYALNMLNDM-----TQRGLSPDTYCYNALIKGFCDVGLLDKARS-LQLEISKNDCFPTS 411

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
           C + ILI   C+ G L+ A ++  +M+    S P+++T++ LIDGLCK G   EA  LF 
Sbjct: 412 CTYTILICGMCRNGLLDEARQIFNQMENLGCS-PSIMTFNALIDGLCKAGELEEARHLFY 470

Query: 263 EM-------------VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           +M                D+++ D  +   +++  C  G + +A K++  + ++G  P++
Sbjct: 471 KMEIGKNPSLFLRLSQGADRVM-DTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDI 529

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  L+NGFCK   +  A ++F E++     PD++ Y TLI+ F R  R ++A  +L +
Sbjct: 530 MTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQ 589

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS---CQ 426
           M + GC      +  ++   CR+GK+  A      LW   +    +     L  +    +
Sbjct: 590 MVKNGCTPSSAVYKCLMTWSCRKGKLSVAFS----LWLKYLRSLPSQEDETLKLAEEHFE 645

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           KGELEKA+  L  M  +      A     L+ LC+A  +E+A      L E        S
Sbjct: 646 KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPS 705

Query: 487 WALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
             +L+  +C+   L  A ++   L   E G + +P
Sbjct: 706 CVMLINGLCKDGNLEMAVDIF--LYTLEKGFMLMP 738



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 49/298 (16%)

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           FL+ S    R+  +T     +++  C+ G +  A+++L ++  S +  P+++TY+ LI+G
Sbjct: 481 FLRLSQGADRVM-DTASLQTMVERLCESGLILKAYKLLMQLADSGV-VPDIMTYNVLING 538

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            CK      A +LF E+  K    PD++TY  LIDGF R  + + A ++++ M  NGC P
Sbjct: 539 FCKAKNINGAFKLFRELQLKGHS-PDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTP 597

Query: 308 NVFNYTTLMNGFCKEGKL----------------QE------AKEVFDE----------- 334
           +   Y  LM   C++GKL                QE      A+E F++           
Sbjct: 598 SSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLL 657

Query: 335 -----MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI--VTFNIILG 387
                + NF + P    YT  +   C+A R +EAL++   +KE  C+ D+   +  +++ 
Sbjct: 658 EMNFKLNNFEIAP----YTIWLIGLCQARRSEEALKIFLVLKE--CQMDVNPPSCVMLIN 711

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           GLC++G +E A+ +       G  L       +L     + +++ A++LL  M   G+
Sbjct: 712 GLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGY 769


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 221/458 (48%), Gaps = 21/458 (4%)

Query: 64  AAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           + +S  KC    + A+  FN +          +  TY+ ++    R  + E   A    +
Sbjct: 51  SVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLI 110

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK------AISTCLNL 175
                +  + +   L+K   +    +RV E    +H + R+ P +       + +T L  
Sbjct: 111 LKTGWRVDDIVVNQLLKGLCDT---KRVGE---AMHVLLRQMPEVGCRLGVVSYNTLLKG 164

Query: 176 LIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
           L +  + + A+  L      Q     P+   +NI+I      G ++ A+ +  EM  S  
Sbjct: 165 LCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVS-- 222

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
             P+++TY+T+IDGLCK      A ++F++MV K  + P+ +TYN +IDG C+  +VD A
Sbjct: 223 --PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG-VKPNNVTYNTIIDGLCKAQEVDMA 279

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           + + + M + G  P+   Y T+++G CK   +  A+ VF +M +  +KPD + Y T+I+ 
Sbjct: 280 EGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+A  +D+A  + ++M ++G K D +T+ II+ GLC+   ++ A G+ +++   G+  N
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +++     G+ E+ ++ ++ M      P   T   LL  LCK G   +A     
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFD 459

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            ++  G KP    + +++    +   L    +LL+ +V
Sbjct: 460 SMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 220/440 (50%), Gaps = 7/440 (1%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           +E   A ++F  + E KG   NN TY TI+D L + ++ +  + V ++M  +  K     
Sbjct: 239 QEVDRAEDVFQQMVE-KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVT 297

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           +  ++         +R   +F ++  I R  KP     +T ++ L ++  +D A+   + 
Sbjct: 298 YNTIIDGLCKAQAVDRAEGVFQQM--IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                 +KP+   + I+I   CK  +++ A  V ++M    +  PN  TY+ LI G    
Sbjct: 356 MIDK-GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK-PNNGTYNCLIHGYLST 413

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G++ E ++  +EM + D + PD  TY +L+D  C+ GK + A+ + + M   G  P+V  
Sbjct: 414 GQWEEVVQRIKEMSAHD-LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTI 472

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  +++G+ K+G L E  ++ + M    + P+   + T+I  + +   +DE + +  +MK
Sbjct: 473 YGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMK 532

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           ++G   ++VT+  ++  LC+ G++++A+    ++  +G+  N   +  ++   C   + E
Sbjct: 533 QQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWE 592

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           K  EL   ML +G  P     N +L  LCK G   +A   +  +V MG KP+  S+  L+
Sbjct: 593 KVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLI 652

Query: 492 ELICRGRKLLFAFELLDELV 511
           +  C   ++  A +LLD +V
Sbjct: 653 DGHCFASRMDEAVKLLDGMV 672



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 174/319 (54%), Gaps = 9/319 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSY--PNLITYSTLIDGLCKNGRFREAIELFE 262
           +N L+K  C R   E A E+L  M   Q S   P++++Y+ +I+G    G+  +A  LF 
Sbjct: 158 YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFL 217

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM     + PD +TYN +IDG C+  +VDRA+ + + M   G  PN   Y T+++G CK 
Sbjct: 218 EM----GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKA 273

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            ++  A+ VF +M +  +KP  + Y T+I+  C+A  VD A  + ++M +RG K D VT+
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N I+ GLC+   I++A G+ +++   G+  +  +Y I+++  C+   +++A  + + M+ 
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +G  P+  T N L+      G  E+    +  +     +P+  ++ LL++ +C+  K   
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453

Query: 503 AFELLDELV---IKESGTI 518
           A  L D ++   IK S TI
Sbjct: 454 ARSLFDSMIRKGIKPSVTI 472



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 200/426 (46%), Gaps = 4/426 (0%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG   +N TY TI+D L + +  +  + V +QM     K     +  ++         +
Sbjct: 288 DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAID 347

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +   +F ++      KP     +  ++ L ++  VD A+   +       +KPN   +N 
Sbjct: 348 KAEGVFQQMID-KGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK-GVKPNNGTYNC 405

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  +   G  E   + +KEM    +  P++ TY  L+D LCKNG+  EA  LF+ M+ K
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLE-PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRK 464

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I P    Y +++ G+ + G +     ++  M  NG +PN   + T++  + K   + E
Sbjct: 465 G-IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDE 523

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
              +F +MK   L P+ + Y TLI+  C+ GRVD+A+    +M   G   + V FN ++ 
Sbjct: 524 VMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVY 583

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC   K E+   +  ++   GI  +   +  VL   C++G + +A  L+  M+C G  P
Sbjct: 584 GLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKP 643

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              + N L+   C A   ++A   L G+V  G KP   S+  L+   C+  ++  A+ L 
Sbjct: 644 DVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLF 703

Query: 508 DELVIK 513
            E++ K
Sbjct: 704 REMLRK 709



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 215/454 (47%), Gaps = 37/454 (8%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG   +N TY  I+D L + +  +  + V +QM  +  K + G +  L+  + +    E
Sbjct: 358 DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWE 417

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK----------------- 190
            V++   ++     E P +      L+ L ++ + + A++                    
Sbjct: 418 EVVQRIKEMSAHDLE-PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476

Query: 191 ---------YSNQHLRL--------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
                     S  H  L         PN  IFN +I  + KR  ++    +  +MK+  +
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           S PN++TY TLID LCK GR  +A+  F +M++ + + P+ + +N L+ G C   K ++ 
Sbjct: 537 S-PNVVTYGTLIDALCKLGRVDDAVLQFNQMIN-EGVTPNNVVFNSLVYGLCTVDKWEKV 594

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           +++   M N G  P++  + T++   CKEG++ EA+ + D M    LKPD I Y TLI+ 
Sbjct: 595 EELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C A R+DEA++LL  M   G K +IV++N +L G C+ G+I+ A  +  ++   G+   
Sbjct: 655 HCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPG 714

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +LN   + G   +A EL   M+    L    T + +L   CK    ++A     
Sbjct: 715 VETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQ 774

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
            L  M  + +  ++ ++++ + +G +   A +L 
Sbjct: 775 SLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLF 808



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 179/336 (53%), Gaps = 4/336 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +T ++ L ++ +VD A++  +   +   +KPN   +N +I   CK   ++ A  
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK-GVKPNNVTYNTIIDGLCKAQEVDMAEG 281

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           V ++M    +  P+ +TY+T+IDGLCK      A  +F++M+ +  + PD +TYN +IDG
Sbjct: 282 VFQKMVDKGVK-PSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG-VKPDHVTYNTIIDG 339

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+   +D+A+ + + M + G  P+   YT +++G CK   +  A+ VF +M +  +KP+
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y  LI+ +   G+ +E ++ +KEM     + D+ T+ ++L  LC+ GK  EA  + +
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFD 459

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   GI  +   Y I+L+   +KG L +  +LL LM+  G  P++   N ++    K  
Sbjct: 460 SMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRA 519

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
           M ++       + + G  P   ++  L++ +C+ GR
Sbjct: 520 MIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 197/412 (47%), Gaps = 43/412 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLR--QMTYETCKFHEGIFLNLMKHFSNCS 144
           +Q+G + N  TY T++D L +  + +  DAVL+  QM  E    +  +F +L+       
Sbjct: 532 KQQGLSPNVVTYGTLIDALCKLGRVD--DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVD 589

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
             E+V E+F                                   L+  NQ +R  P+   
Sbjct: 590 KWEKVEELF-----------------------------------LEMLNQGIR--PDIVF 612

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FN ++ + CK G +  A  ++  M    +  P++I+Y+TLIDG C   R  EA++L + M
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLK-PDVISYNTLIDGHCFASRMDEAVKLLDGM 671

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VS   + P+ ++YN L+ G+C+ G++D A  +   M   G  P V  Y T++NG  + G+
Sbjct: 672 VSAG-LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             EA+E++  M           Y+ +++ FC+    DEA ++ + +     + DI+TFNI
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GL + G+ E+A+ +   +  +G+  +  +YR++     ++G LE+   L  +M   G
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             P+    N L+ +L   G    A   L  L E  F  E+ + ++L+ L  R
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSR 902


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 206/441 (46%), Gaps = 42/441 (9%)

Query: 65  AISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
           A  +IK    P+   +           NH  +TY  ++  L +    + V+ V   M  +
Sbjct: 43  AFEVIKRFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSD 102

Query: 125 TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
                  +   L+   +  S  + V ++  ++        S    +  L++L++ NQV  
Sbjct: 103 GHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSF-VYNNLLSVLVKQNQVHE 161

Query: 185 AQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           A    K   ++L ++  P+T  FNILI+  C+ G ++ AFEV K+M+ S    P+++TY+
Sbjct: 162 AIYLFK---EYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDME-SFGCLPDVVTYN 217

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TLI+GLCK    +   ELF+E+ S+    PD +TY  +I GFC+ GK+  A  + E M  
Sbjct: 218 TLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMR 277

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +G  PNV  +  L++GF K G + EA+ ++ +M  F    D + +T+LI+ +CRAG+V+ 
Sbjct: 278 SGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNH 337

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY----------- 411
            L+    MK R     + T+ +++  LC+E ++ EA   L ++    I            
Sbjct: 338 GLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVID 397

Query: 412 ------------------------LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
                                    +K ++ I++   C KG + +AI +   ML     P
Sbjct: 398 GFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAP 457

Query: 448 HYATSNELLVRLCKAGMAEDA 468
              T N L+  L KAGM  +A
Sbjct: 458 DNITVNSLISCLLKAGMPNEA 478



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 179/349 (51%), Gaps = 4/349 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P  K +   +  + +++  D+ +  L    Q   ++ N+ ++N L+    K+  +  A  
Sbjct: 106 PDSKLLGFLVTWMAQASDFDMVKKLLA-EVQGKEVRINSFVYNNLLSVLVKQNQVHEAIY 164

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + KE    Q S P+  T++ LI GLC+ G    A E+F++M S    LPD +TYN LI+G
Sbjct: 165 LFKEYLVMQ-SPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFG-CLPDVVTYNTLING 222

Query: 284 FCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            C+  +V R  ++  E    + C+P++  YT++++GFCK GK++EA  +F+EM    ++P
Sbjct: 223 LCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQP 282

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + I +  LI+ F + G + EA  + ++M    C AD+VTF  ++ G CR G++   L   
Sbjct: 283 NVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFW 342

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +    +     +Y +++N  C++  L +A + L  +     +P     N ++   CKA
Sbjct: 343 NVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKA 402

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G  ++  + L  + E    P+  ++ +L+   C   ++  A  + + ++
Sbjct: 403 GNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRML 451



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 184/373 (49%), Gaps = 19/373 (5%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQN 187
           I   ++K F+N  +  + LE        +R   ++    +  NLL+ S       DL   
Sbjct: 42  IAFEVIKRFNNPKVGFKFLEF-------SRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNI 94

Query: 188 FLKY--SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
              Y  S+ HL   P++ +   L+    +    +   ++L E++  ++   N   Y+ L+
Sbjct: 95  VFDYMGSDGHL---PDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRI-NSFVYNNLL 150

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
             L K  +  EAI LF+E +   Q  PD  T+N+LI G CR G VDRA ++ + M++ GC
Sbjct: 151 SVLVKQNQVHEAIYLFKEYLVM-QSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGC 209

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEAL 364
            P+V  Y TL+NG CK  ++Q   E+F E+++     PD + YT++I+ FC++G++ EA 
Sbjct: 210 LPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEAS 269

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L +EM   G + +++TFN+++ G  + G I EA  M  K+ Y     +  ++  +++  
Sbjct: 270 NLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGY 329

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G++   ++   +M  R   P   T   L+  LCK     +A   L  +      P+ 
Sbjct: 330 CRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKP 389

Query: 485 DSWALLVELICRG 497
             +  +++  C+ 
Sbjct: 390 FMYNPVIDGFCKA 402



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 2/168 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   F  LI  +C+ G +    +    MK   +S P + TY+ LI+ LCK  R  EA + 
Sbjct: 318 DVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVS-PTVYTYAVLINALCKENRLNEARDF 376

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             + +    I+P    YN +IDGFC+ G VD    I++ M+   C+P+   +T L+ G C
Sbjct: 377 LGQ-IKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHC 435

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
            +G++ EA  +F+ M      PD I   +LI+C  +AG  +EA  + K
Sbjct: 436 VKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRK 483


>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
          Length = 478

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 210/442 (47%), Gaps = 25/442 (5%)

Query: 68  LIKCEKEPQCALEIFN------TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           L++ E++P+ AL IF+      + S       + AT + +  +LA         ++L + 
Sbjct: 23  LVRAERDPRRALAIFDGATAAASTSAPDPITPSLATVSLLTSRLASAGHLPLATSLLSRS 82

Query: 122 --TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
              + +    E  FL L++ FS        L +F           S ++ +  L  L+  
Sbjct: 83  RGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAALVAH 142

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT--LESAFEVLKEMKKSQMSYPN 237
           + + LA++ L    +     P    +N+L+K HC      +E A  + + + K     P+
Sbjct: 143 SHLPLARSLLA-DMRAAGFAPTAATYNVLLKAHCSDAAAHIEDALRLFRNIPK-----PD 196

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + +Y+T+IDGLC+ GR  EA+++F EMV K  I P  +TY  +I    R G  D A KI 
Sbjct: 197 VCSYNTIIDGLCRRGRLAEALDMFSEMVGK-CIAPTVVTYTTVIHWLAREGCFDDALKIF 255

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M   G +PN+  Y++L++G CK G+   A E+ D M      P+ I Y+++I+  C+ 
Sbjct: 256 HEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKE 315

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
             + EA+E+L  M+ +G K D   F  ++ GLC  G+  EA   L+++   GI  N+ ++
Sbjct: 316 HMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTW 375

Query: 418 RI-------VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
            +       VL   C KGEL +A ++ +    R  +    T+  LLV        E AA 
Sbjct: 376 SLHARINNTVLTALCDKGELGRAFQVYQSTRTRS-ISTDPTTFHLLVESFSKNNIEKAAR 434

Query: 471 ALFGLVEMGFKPESDSWALLVE 492
            +  ++     PE ++W +++ 
Sbjct: 435 VVLDMLSERCIPERETWDVIIS 456



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 13/321 (4%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT----YSTLIDGLCKNGR 253
           + P+    ++L       G L  A  +L    +S+  +P++      +  L+    +  R
Sbjct: 52  ITPSLATVSLLTSRLASAGHLPLATSLLS---RSRGVFPSVAALEPPFLGLLRAFSRTHR 108

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              A+ LF    S   +   A +YN ++        +  A+ ++  M+  G  P    Y 
Sbjct: 109 PLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYN 168

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNF--LLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
            L+   C +     A  + D ++ F  + KPD   Y T+I+  CR GR+ EAL++  EM 
Sbjct: 169 VLLKAHCSDA----AAHIEDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDMFSEMV 224

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
            +     +VT+  ++  L REG  ++AL +  ++   G+  N  +Y  +++  C+ G   
Sbjct: 225 GKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRAT 284

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A+ELL  M+    LP+  T + ++  LCK  M  +A   L  +   G KP++  +  L+
Sbjct: 285 SALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLI 344

Query: 492 ELICRGRKLLFAFELLDELVI 512
             +C   + + A   LDE+V+
Sbjct: 345 VGLCDAGRAVEAANYLDEMVL 365


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/250 (36%), Positives = 153/250 (61%), Gaps = 2/250 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F++   M  S +  P++ TYS LI+GLCK  +  EA
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQ-PDVYTYSVLINGLCKESKMNEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF EM+ K  ++P+ +T+  LIDG C+ GKVD A +  + M +    P++  Y TL+ 
Sbjct: 226 NDLFNEMLDKG-LVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A+++ DEM+   LKPD I YTTLI+  C+ G +D A EL + M +   + 
Sbjct: 285 GLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+K +++ A +LL
Sbjct: 345 DDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLL 404

Query: 438 RLMLCRGFLP 447
           + M  +G +P
Sbjct: 405 KEMQRQGHVP 414



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 195/351 (55%), Gaps = 7/351 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLES 220
           ++  +   S  +N  +ES  V  A    + + +H LR+  +TC    +++H  K    + 
Sbjct: 62  QRSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTC--RKVLEHLMKLKYFKL 119

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            +   KE+   +  YP +L  ++ L+   CK G    A  +F+  ++K  + P  +++N 
Sbjct: 120 VWGFYKEI--LECGYPASLYFFNILMHRFCKEGEIWIAQSVFDS-ITKWGLRPSVVSFNT 176

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L++G+ R G +D+  K+   M  +G  P+V+ Y+ L+NG CKE K+ EA ++F+EM +  
Sbjct: 177 LMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKG 236

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + +TTLI+  C+ G+VD A+E  K+M  +    D++T+N ++ GLC++G +++A 
Sbjct: 237 LVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQ 296

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L+++   G+  +K +Y  +++ +C++G+L+ A EL   M+             L+  L
Sbjct: 297 DLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGL 356

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           C+ G A DA   L  ++ +G KP++ ++ +++   C+   +  A +LL E+
Sbjct: 357 CQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEM 407



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 147/278 (52%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P++++++TL++G  + G   +  +L   M
Sbjct: 139 FNILMHRFCKEGEIWIAQSVFDSITKWGLR-PSVVSFNTLMNGYIRLGDLDQGFKLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K++ A  +   M + G  PN   +TTL++G CK GK
Sbjct: 198 HASG-VQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E + +M +    PD I Y TLI   C+ G + +A +LL EM+ +G K D +T+  
Sbjct: 257 VDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG ++ A  + E +  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK    + AA  L  +   G  P
Sbjct: 377 LKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 159/312 (50%), Gaps = 26/312 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           + +  + F  + E K +Q S  ++  +S LI+   ++G  R+AIE F         +P  
Sbjct: 45  KDSASAVFAAILETKGTQRS--DIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFD 102

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         K+I+E     G   +++ +  LM+ FCKEG
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGF--------YKEILEC----GYPASLYFFNILMHRFCKEG 150

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++  A+ VFD +  + L+P  + + TL+N + R G +D+  +L   M   G + D+ T++
Sbjct: 151 EIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYS 210

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+ EA  +  ++   G+  N  ++  +++  C+ G+++ A+E  + ML +
Sbjct: 211 VLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQ 270

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
            FLP   T N L+  LCK G  + A   L  +   G KP+  ++  L++  C+   L  A
Sbjct: 271 CFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSA 330

Query: 504 FELLDELVIKES 515
           FE L E ++KES
Sbjct: 331 FE-LRETMVKES 341


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 169/324 (52%), Gaps = 4/324 (1%)

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L +      + PN    +ILI   C    +  AF VL ++ K     P+  T++TLI G+
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQ-PDTATFTTLIRGI 141

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
              G+  EA+ LF++M+  +   PD +TY  LI+G C+ G    A +++  M    C PN
Sbjct: 142 YVEGKIGEALHLFDKMIG-EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPN 200

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           VF Y T+++  CK+ ++ EA  +F EM    + PD   Y +LI+  C          LL 
Sbjct: 201 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 260

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM +     D+V+FN ++  LC+EGK+ EA  +++K+   G+  N  +Y  +++  C   
Sbjct: 261 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS 320

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSW 487
           E+++A+++   M+C+G +P+  + N L+   CK     D A+ LFG +      P++ ++
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRI-DKAMYLFGEMCRQELIPDTVTY 379

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
           + L+  +C   +L  A  L  E+V
Sbjct: 380 STLIHGLCHVERLQDAIALFHEMV 403



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 177/348 (50%), Gaps = 3/348 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +    T +N L +      A   L    Q    +PN   +N +I   CK   +  AF
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK-NCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  EM    +S P++ TY++LI  LC    ++    L  EMV   +I+PD +++N ++D
Sbjct: 222 NLFSEMVTKGIS-PDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPDVVSFNTVVD 279

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+ GKV  A  +++ M   G  PNV  YT LM+G C   ++ EA +VFD M      P
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + I Y TLIN +C+  R+D+A+ L  EM  +    D VT++ ++ GLC   ++++A+ + 
Sbjct: 340 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 399

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++       N  +YRI+L++ C+   L +A+ LL+ +      P    +N  +  +C+A
Sbjct: 400 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 459

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G  E A      L   G +P+  ++++++  +CR   L  A +L  E+
Sbjct: 460 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 507



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 210/437 (48%), Gaps = 42/437 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  +  TY T+++ L +     A   +L  M  + C           
Sbjct: 150 ALHLFDKMIGE-GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC----------- 197

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                    +P++ A +T ++ L +  QV  A N   +S    +
Sbjct: 198 -------------------------QPNVFAYNTIIDSLCKDRQVTEAFNL--FSEMVTK 230

Query: 198 -LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+   +N LI   C     +    +L EM  S++  P++++++T++D LCK G+  E
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI-MPDVVSFNTVVDALCKEGKVTE 289

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++ ++M+ +  + P+ +TY  L+DG C   ++D A K+ + M   GC PNV +Y TL+
Sbjct: 290 AHDVVDKMIQRG-VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+CK  ++ +A  +F EM    L PDT+ Y+TLI+  C   R+ +A+ L  EM      
Sbjct: 349 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 408

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++VT+ I+L  LC+   + EA+ +L+ +    +  +     I ++  C+ GELE A +L
Sbjct: 409 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 468

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +  +G  P   T + ++  LC+ G+ ++A+     + E G       +  +     R
Sbjct: 469 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 528

Query: 497 GRKLLFAFELLDELVIK 513
             +   A +LL E+V +
Sbjct: 529 NNETSRAIQLLQEMVAR 545



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 194/411 (47%), Gaps = 5/411 (1%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++G  I+ +        A+ +  ++  QK    N   Y TI+D L + ++     
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMV-QKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            +  +M  +        + +L+    N    + V  + +++   ++  P + + +T ++ 
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD-SKIMPDVVSFNTVVDA 280

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L +  +V  A + +    Q   ++PN   +  L+  HC    ++ A +V   M   +   
Sbjct: 281 LCKEGKVTEAHDVVDKMIQR-GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV-CKGCM 338

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN+I+Y+TLI+G CK  R  +A+ LF EM  + +++PD +TY+ LI G C   ++  A  
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMC-RQELIPDTVTYSTLIHGLCHVERLQDAIA 397

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M      PN+  Y  L++  CK   L EA  +   ++   L PD       I+  C
Sbjct: 398 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 457

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           RAG ++ A +L   +  +G + D+ T++I++ GLCR G ++EA  +  ++  +G  LN  
Sbjct: 458 RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC 517

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
            Y  +     +  E  +AI+LL+ M+ RGF    +T    +  L   G+ +
Sbjct: 518 IYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQ 568



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 132/239 (55%), Gaps = 2/239 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI  +CK   ++ A  +  EM + ++  P+ +TYSTLI GLC   R ++AI 
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL-IPDTVTYSTLIHGLCHVERLQDAIA 397

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EMV+  QI P+ +TY +L+D  C+   +  A  +++ ++ +  +P++      ++G 
Sbjct: 398 LFHEMVACSQI-PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 456

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G+L+ A+++F  + +  L+PD   Y+ +IN  CR G +DEA +L +EM E GC  + 
Sbjct: 457 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 516

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             +N I  G  R  +   A+ +L+++   G   + ++  + +      G  +   ++LR
Sbjct: 517 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 575



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 145/297 (48%), Gaps = 2/297 (0%)

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           T++ A      M + Q   P+ + ++ L+  + K       + L  +M S   I P+  T
Sbjct: 41  TIDGAISSFNRMLRMQ-PPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFG-IPPNIYT 98

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
            ++LI+ FC   +V  A  ++  +   G  P+   +TTL+ G   EGK+ EA  +FD+M 
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +PD + Y TLIN  C+ G    A+ LL  M ++ C+ ++  +N I+  LC++ ++ 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  +  ++   GI  +  +Y  +++  C   E +    LL  M+    +P   + N ++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             LCK G   +A   +  +++ G +P   ++  L++  C   ++  A ++ D +V K
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK 335



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 4/171 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   + IL+ + CK   L  A  +LK ++ S +  P++   +  IDG+C+ G    A +
Sbjct: 409 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD-PDIQVNNIAIDGMCRAGELEAARD 467

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF  + SK  + PD  TY+++I+G CR G +D A K+   M  NGC  N   Y T+  GF
Sbjct: 468 LFSNLSSKG-LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGF 526

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL-ELLKE 369
            +  +   A ++  EM       D    T  +      G +D++L ++L+E
Sbjct: 527 LRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG-LDQSLKQILRE 576


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 210/430 (48%), Gaps = 15/430 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   +  TY T+LD   +  + + V  +L++M         G   N + H    +   
Sbjct: 230 QLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRG----SGCLPNDVTHNVVITGLA 285

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN------QHLRLKPN 201
           R  ++      +   + S KA S   N LI      LA+ F+K ++      ++  + P 
Sbjct: 286 RKGDLEEAAEMVEGMRLSKKASSFTYNPLITGL---LAKGFVKKADDLQLEMENEGIMPT 342

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N +I    + G +E+A     EM+   +  P++ITY++L++G CK G  +EA+ LF
Sbjct: 343 VVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQ-PDVITYNSLLNGYCKAGSLKEALLLF 401

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            ++     + P  LTYN+LIDG+CR G ++ A+++ E M   GC P+V  YT LM G   
Sbjct: 402 GDL-RHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHN 460

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
              L  A+E FDEM +  L+PD   Y T I      G + +A  L + M   G  +D VT
Sbjct: 461 ACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVT 520

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +NI++ GLC+ G + +A  +  K+ ++G+  +  +Y  +++  C++G L +A +  + M+
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P   T    +   C+ G    A      ++E G +P   ++ +L+  +CR  +  
Sbjct: 581 SDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQ 640

Query: 502 FAFELLDELV 511
            A+    E++
Sbjct: 641 LAYRHFHEML 650



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 185/387 (47%), Gaps = 41/387 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQ-NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P++   +  ++ L++S QV+ AQ  F++   + + L+P+   +N L+  +CK G+L+ A 
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEM--RAMGLQPDVITYNSLLNGYCKAGSLKEAL 398

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  +++ + ++ P ++TY+ LIDG C+ G   EA  L EEMV +   LPD  TY +L+ 
Sbjct: 399 LLFGDLRHAGLA-PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG-CLPDVCTYTILMK 456

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT---------------------------- 314
           G      +  A++  + M + G  P+ F Y T                            
Sbjct: 457 GSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISS 516

Query: 315 -------LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
                  L++G CK G L +AK++  +M +  L+PD I YT LI+  C  G + EA +  
Sbjct: 517 DTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFF 576

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           K+M   G     VT+ + +   CR G +  A G   K+  +G+  N+ +Y ++++  C+ 
Sbjct: 577 KDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRT 636

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G  + A      ML RG +P+  T   L+   CK G  EDA    F + + G  P+  + 
Sbjct: 637 GRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTH 696

Query: 488 ALLVELICRGRKLLFAFELLDELVIKE 514
             L +    G  +  A E L+  V+ E
Sbjct: 697 KALFKGFDEGH-MNHAIEYLENAVLGE 722



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 4/280 (1%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++   + ++  L    R+ +   +  EM+    I P  +TYN L+D F + G+ D+   
Sbjct: 200 PDVKDCNRVLRVLSDAARWDDICAVHAEMLQLG-IEPSIVTYNTLLDSFLKEGRNDKVAM 258

Query: 296 IMEFM--KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           +++ M  + +GC PN   +  ++ G  ++G L+EA E+ + M+    K  +  Y  LI  
Sbjct: 259 LLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASSFTYNPLITG 317

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
               G V +A +L  EM+  G    +VT+N ++ GL + G++E A     ++   G+  +
Sbjct: 318 LLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPD 377

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +LN  C+ G L++A+ L   +   G  P   T N L+   C+ G  E+A     
Sbjct: 378 VITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKE 437

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +VE G  P+  ++ +L++       L  A E  DE++ K
Sbjct: 438 EMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK 477



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 11/217 (5%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M ++G  P+V +   ++       +  +   V  EM    ++P  + Y TL++ F + GR
Sbjct: 193 MASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGR 252

Query: 360 VDEALELLKEMKER--GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-- 415
            D+   LLKEM+ R  GC  + VT N+++ GL R+G +EEA  M+E     G+ L+K   
Sbjct: 253 NDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVE-----GMRLSKKAS 307

Query: 416 --SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  ++     KG ++KA +L   M   G +P   T N ++  L ++G  E A +   
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +  MG +P+  ++  L+   C+   L  A  L  +L
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDL 404



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 4/256 (1%)

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +  F EM S   + PD    N ++       + D    +   M   G  P++  Y TL++
Sbjct: 187 LSAFHEMASHG-VAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLD 245

Query: 318 GFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
            F KEG+  +   +  EM  +     P+ + +  +I    R G ++EA E+++ M+    
Sbjct: 246 SFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK- 304

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           KA   T+N ++ GL  +G +++A  +  ++  +GI     +Y  +++   Q G++E A  
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
               M   G  P   T N LL   CKAG  ++A +    L   G  P   ++ +L++  C
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC 424

Query: 496 RGRKLLFAFELLDELV 511
           R   L  A  L +E+V
Sbjct: 425 RLGDLEEARRLKEEMV 440


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 206/413 (49%), Gaps = 12/413 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM-KHFSNCSLH 146
             G   N  TY  +L  L R  + +    ++ +M   +  F +G   +++    +     
Sbjct: 79  HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSM-FPDGFTYSILFDGLTRTGES 137

Query: 147 ERVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
             +L +F +    + +K  +    TC   LN L +  +V  A+  L+    H  L P T 
Sbjct: 138 RTMLSLFAE----SLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML-VHTGLVPTTV 192

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           I+N LI  +C+   L  AF + ++MK   +  P+ ITY+ LI+GLCK     +A +L  E
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIR-PDHITYNALINGLCKLEMVTKAEDLVME 251

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  K  + P   T+N LID +   G++++   ++  M+  G   +V ++ +++  FCK G
Sbjct: 252 M-EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 310

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K+ EA  + D+M    + P+   Y ++I+ +  +G  ++A  L+++MK  G  A IVT+N
Sbjct: 311 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYN 370

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           ++L GLCR  +I+EA  ++  L   G+  +  SY  +++  C KG+ +KA+ELL+ M   
Sbjct: 371 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 430

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           G  P   T + L+  L  AG   D       ++    +P S  + ++V+   R
Sbjct: 431 GIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 172/363 (47%), Gaps = 36/363 (9%)

Query: 183 DLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           DL   F L+    H   KPN   +N+L+   C+ G ++    ++ EM    M +P+  TY
Sbjct: 66  DLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSM-FPDGFTY 124

Query: 242 STLIDGLCKNGRFREAIELFEEMVSK-------------------------DQIL----- 271
           S L DGL + G  R  + LF E + K                         +Q+L     
Sbjct: 125 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 184

Query: 272 ----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               P  + YN LI+G+C+   +  A  I E MK+    P+   Y  L+NG CK   + +
Sbjct: 185 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 244

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+++  EM+   + P    + TLI+ +  AG++++   +L +M+++G K+D+++F  ++ 
Sbjct: 245 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 304

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
             C+ GKI EA+ +L+ + Y  +  N   Y  +++   + G+ E+A  L+  M   G   
Sbjct: 305 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 364

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N LL  LC++   ++A   ++ L   G +P+  S+  ++   C       A ELL
Sbjct: 365 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 424

Query: 508 DEL 510
            E+
Sbjct: 425 QEM 427



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 145/275 (52%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+  +Y+ +I GL ++G+  +A+++F+EMV    ++P+ +TYN +IDG  +GG ++   +
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM-GVVPNWITYNTMIDGHVKGGDLEAGFR 72

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M ++G  PN+  Y  L++G C+ G++ E + + DEM +  + PD   Y+ L +   
Sbjct: 73  LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R G     L L  E  ++G      T +I+L GLC++GK+ +A  +LE L + G+     
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  ++N  CQ  +L  A  +   M  R   P + T N L+  LCK  M   A   +  +
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + G  P  +++  L++      +L   F +L ++
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 287



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 6/317 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N++I    + G    A +V  EM    +  PN ITY+T+IDG  K G       
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGV-VPNWITYNTMIDGHVKGGDLEAGFR 72

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L ++M+  D   P+ +TYNVL+ G CR G++D  + +M+ M ++   P+ F Y+ L +G 
Sbjct: 73  LRDQML-HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131

Query: 320 CKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            + G+ +    +F E   K  +L   T   + L+N  C+ G+V +A ++L+ +   G   
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTC--SILLNGLCKDGKVAKAEQVLEMLVHTGLVP 189

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
             V +N ++ G C+   +  A  + E++    I  +  +Y  ++N  C+   + KA +L+
Sbjct: 190 TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 249

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P   T N L+     AG  E     L  + + G K +  S+  +V+  C+ 
Sbjct: 250 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 309

Query: 498 RKLLFAFELLDELVIKE 514
            K+  A  +LD+++ K+
Sbjct: 310 GKIPEAVAILDDMIYKD 326



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 100/181 (55%), Gaps = 2/181 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  ++N +I  + + G  E AF ++++MK S +S  +++TY+ L+ GLC++ +  EA
Sbjct: 327 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS-ASIVTYNLLLKGLCRSSQIDEA 385

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL   + ++  + PD ++YN +I   C  G  D+A ++++ M   G  P +  Y TL++
Sbjct: 386 EELIYTLRNQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVS 444

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
                G++ + + ++ +M +  ++P +  Y  +++ + R     +   L KEM E+G   
Sbjct: 445 ALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAF 504

Query: 378 D 378
           D
Sbjct: 505 D 505



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 32/261 (12%)

Query: 32  VIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVS--EQK 89
           V++      DP VET +T +DA        +G A  L KC          F  +S  +QK
Sbjct: 249 VMEMEKSGVDPSVETFNTLIDA--------YGTAGQLEKC----------FTVLSDMQQK 290

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  ++ +++    +  K     A+L  M Y+    +  ++ +++  +      E+ 
Sbjct: 291 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 350

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIF 205
             +  K+     +   + A     NLL++    S+Q+D A+  + Y+ ++  L+P+   +
Sbjct: 351 FLLVEKM-----KNSGVSASIVTYNLLLKGLCRSSQIDEAEELI-YTLRNQGLRPDVVSY 404

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N +I   C +G  + A E+L+EM K  +  P L TY TL+  L   GR  +   L+++M+
Sbjct: 405 NTIISACCNKGDTDKALELLQEMNKYGIR-PTLRTYHTLVSALASAGRVHDMECLYQQML 463

Query: 266 SKDQILPDALTYNVLIDGFCR 286
            K+ + P +  Y +++D + R
Sbjct: 464 HKN-VEPSSSIYGIMVDAYVR 483


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 193/376 (51%), Gaps = 8/376 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G+  +  T  ++L+      +     A++ QM     K     F  L+       LH + 
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF---LHNKA 199

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E    I  + +   +P L      +N L +    DLA N L    +  +++ N  I++ 
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN-KMEAAKIEANVVIYST 258

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK    + A  +  EM+   +  PN+ITYS+LI  LC  GR+ +A  L  +M+ +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVR-PNVITYSSLISCLCNYGRWSDASRLLSDMIER 317

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            +I P+ +T++ LID F + GK+ +A+K+ E M     +PN+F Y++L+NGFC   +L E
Sbjct: 318 -KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AK++ + M      P+ + Y TLIN FC+A RVD+ +EL +EM +RG   + VT+  ++ 
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G  +    + A  + +++   G++ N  +Y I+L+  C+ G+L KA+ +   +      P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496

Query: 448 HYATSNELLVRLCKAG 463
              T N ++  +CKAG
Sbjct: 497 DIYTYNIMIEGMCKAG 512



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 178/337 (52%), Gaps = 3/337 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP     +T ++ L   N+   A   +    Q    +P+   +  ++   CKRG  + A 
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-GCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L +M+ +++   N++ YST+ID LCK     +A+ LF EM +K  + P+ +TY+ LI 
Sbjct: 239 NLLNKMEAAKIE-ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG-VRPNVITYSSLIS 296

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C  G+   A +++  M     NPN+  ++ L++ F K+GKL +A+++++EM    + P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +   Y++LIN FC   R+ EA ++L+ M  + C  ++VT+N ++ G C+  ++++ + + 
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   G+  N  +Y  +++   Q  + + A  + + M+  G  P+  T N LL  LCK 
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           G    A +    L     +P+  ++ +++E +C+  K
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 207/433 (47%), Gaps = 8/433 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F  +++ + F  +   ++ +L  +A+  KF+ V +   +M       +   +  L+
Sbjct: 62  AIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F  CS     L +  K+  +  E P +  +++ LN     N++  A   +    + + 
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYE-PDIVTLNSLLNGFCHGNRISDAVALVDQMVE-MG 178

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+T  F  LI           A  ++  M +     P+L+TY  +++GLCK G    A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ-PDLVTYGAVVNGLCKRGDTDLA 237

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L  +M +  +I  + + Y+ +ID  C+    D A  +   M+N G  PNV  Y++L++
Sbjct: 238 LNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C  G+  +A  +  +M    + P+ + ++ LI+ F + G++ +A +L +EM +R    
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I T++ ++ G C   ++ EA  MLE +       N  +Y  ++N  C+   ++K +EL 
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R M  RG + +  T   L+    +A   ++A +    +V +G  P   ++ +L++ +C+ 
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476

Query: 498 RKL---LFAFELL 507
            KL   +  FE L
Sbjct: 477 GKLAKAMVVFEYL 489



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 155/297 (52%), Gaps = 8/297 (2%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP---DA 274
           L+ A  +   M +S+  +P++I +S L+  + K  +F   I   E+M    +IL    + 
Sbjct: 59  LDDAIGLFGVMAQSR-PFPSIIEFSKLLSAIAKMNKFDLVISFGEKM----EILGISHNL 113

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            TYN+LI+ FCR  ++  A  ++  M   G  P++    +L+NGFC   ++ +A  + D+
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M     KPDT+ +TTLI+      +  EA+ L+  M +RGC+ D+VT+  ++ GLC+ G 
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
            + AL +L K+    I  N   Y  V++  C+    + A+ L   M  +G  P+  T + 
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           L+  LC  G   DA+  L  ++E    P   +++ L++   +  KL+ A +L +E++
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 1/278 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           NL TY+ LI+  C+  R   A+ L  +M+ K    PD +T N L++GFC G ++  A  +
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           ++ M   G  P+   +TTL++G     K  EA  + D M     +PD + Y  ++N  C+
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G  D AL LL +M+    +A++V ++ ++  LC+    ++AL +  ++   G+  N  +
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C  G    A  LL  M+ R   P+  T + L+    K G    A      ++
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +    P   +++ L+   C   +L  A ++L+ ++ K+
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 110/259 (42%), Gaps = 37/259 (14%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           ++D A  +   M  +   P++  ++ L++   K  K        ++M+   +  +   Y 
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 349 TLINCFCR-----------------------------------AGRVDEALELLKEMKER 373
            LINCFCR                                     R+ +A+ L+ +M E 
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K D VTF  ++ GL    K  EA+ +++++   G   +  +Y  V+N  C++G+ + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVE 492
           + LL  M       +    + ++  LCK    ED A+ LF  +E  G +P   +++ L+ 
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKY-RHEDDALNLFTEMENKGVRPNVITYSSLIS 296

Query: 493 LICRGRKLLFAFELLDELV 511
            +C   +   A  LL +++
Sbjct: 297 CLCNYGRWSDASRLLSDMI 315



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 19/217 (8%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
           K +P + T    +DA     F+  G    L+K EK  +  +        ++  + N  TY
Sbjct: 318 KINPNLVTFSALIDA-----FVKKG---KLVKAEKLYEEMI--------KRSIDPNIFTY 361

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
           +++++      +      +L  M  + C  +   +  L+  F      ++ +E+F ++  
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421

Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
                 ++   +T ++   ++   D AQ   K     + + PN   +NIL+   CK G L
Sbjct: 422 RGLVGNTV-TYTTLIHGFFQARDCDNAQMVFK-QMVSVGVHPNILTYNILLDGLCKNGKL 479

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             A  V + +++S M  P++ TY+ +I+G+CK G+++
Sbjct: 480 AKAMVVFEYLQRSTME-PDIYTYNIMIEGMCKAGKWK 515



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 10/206 (4%)

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           ++Y  ++     + +L +A  +F  M      P  I ++ L++   +  + D  +   ++
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103

Query: 370 MKERGCKADIVTFNIILGGLCR---EGKIEEALGMLEKLWY--DGIYLNKASYRIVLNFS 424
           M+  G   ++ T+NI++   CR          LG + KL Y  D + LN      +LN  
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNS-----LLNGF 158

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C    +  A+ L+  M+  G+ P   T   L+  L     A +A   +  +V+ G +P+ 
Sbjct: 159 CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
            ++  +V  +C+      A  LL+++
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKM 244


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 194/372 (52%), Gaps = 10/372 (2%)

Query: 132 IFLN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           I LN L+  F    L ++ LE+FH++       P     +  +    + +++D A+  L+
Sbjct: 71  ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE 130

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            S+       +      + +  CK   ++ A+++L +M + + + P+++ ++ +I G CK
Sbjct: 131 ESSC---CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCK 187

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM--KNNGCNPN 308
            GR REA E+ E +VS   + P+A+TY  LIDGFC+ G +  A ++ + +  +++   PN
Sbjct: 188 AGRVREAYEMLETLVSMGCV-PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           V  +  L++G CK  +L+ A E+  +MK   L+ DT  YTTL++  C+ GR  E   + +
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFE 306

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM   GC   +VT+  ++   C+ G +++A  ++  +   GI  +  +Y ++L    + G
Sbjct: 307 EMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENG 366

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVR-LCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           ++  A E    +L R   P  A     LVR  CKA + ++A      +++    P+  + 
Sbjct: 367 KVRTATEFFEKIL-RERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATC 425

Query: 488 ALLVELIC-RGR 498
            LLVE++C RGR
Sbjct: 426 KLLVEMLCKRGR 437



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 182/351 (51%), Gaps = 10/351 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L+ I+  L  L ++ ++D A    +     ++  P+    NILI   C+   L+ A E
Sbjct: 36  PNLRDINLLLASLCQAGKMDQAMAIFR----GIQCSPSVITLNILINGFCELQLLDKALE 91

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  EM+K+    P   TY+ +I   CK  R  +A +L EE         D +    +  G
Sbjct: 92  LFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSS---DVIAITSVARG 148

Query: 284 FCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           FC+  +VD A +++ + ++     P++  +  +++GFCK G+++EA E+ + + +    P
Sbjct: 149 FCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVP 208

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD--IVTFNIILGGLCREGKIEEALG 400
           + + YTTLI+ FC++G + EAL+L K +  R   A+  +VTFN ++ GLC+  ++E A  
Sbjct: 209 NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFE 268

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +++++    +  +  +Y  +++  C++G   +   +   ML  G  P   T   L+   C
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           KAG  +DA   +  +V  G  P+  ++ +L+E +    K+  A E  ++++
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKIL 379



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 154/301 (51%), Gaps = 42/301 (13%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN  T+S LI GLCK GR  EA+E + +M+ +   +P+    N+L+   C+ GK+D+A  
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLER-HCVPNLRDINLLLASLCQAGKMDQA-- 57

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINC- 353
            M   +   C+P+V     L+NGFC+   L +A E+F EM KNF L P+   YT +I C 
Sbjct: 58  -MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCY 116

Query: 354 --------------------------------FCRAGRVDEALELLKEMKE-RGCKADIV 380
                                           FC+A RVDEA +LL +M E +  K DIV
Sbjct: 117 CKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIV 176

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +N+I+ G C+ G++ EA  MLE L   G   N  +Y  +++  C+ G L +A++L +++
Sbjct: 177 AWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVL 236

Query: 441 LCRGFL--PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-G 497
             R     P+  T N L+  LCKA   E A   +  +     + ++ ++  L++ +C+ G
Sbjct: 237 SSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQG 296

Query: 498 R 498
           R
Sbjct: 297 R 297



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 168/317 (52%), Gaps = 9/317 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN    N+L+   C+ G ++ A  + + ++ S    P++IT + LI+G C+     +A+E
Sbjct: 36  PNLRDINLLLASLCQAGKMDQAMAIFRGIQCS----PSVITLNILINGFCELQLLDKALE 91

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM     ++P+A TY  +I  +C+  ++D+A++++E  +++ C+ +V   T++  GF
Sbjct: 92  LFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGF 149

Query: 320 CKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           CK  ++ EA ++  D ++    KPD + +  +I+ FC+AGRV EA E+L+ +   GC  +
Sbjct: 150 CKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPN 209

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL--NKASYRIVLNFSCQKGELEKAIEL 436
            VT+  ++ G C+ G + EAL + + L     +   N  ++  +++  C+   LE A EL
Sbjct: 210 AVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFEL 269

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           ++ M  R       T   L+  LCK G   + +     ++  G  P   ++  LV   C+
Sbjct: 270 VKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCK 329

Query: 497 GRKLLFAFELLDELVIK 513
              L  A +++  +V K
Sbjct: 330 AGSLQDAQQVIRSMVAK 346



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           PN F ++ L+ G CK G+L EA E +++M      P+      L+   C+AG++D+A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-SYRIVLNFSC 425
            + ++   C   ++T NI++ G C    +++AL +  ++  +   + +A +Y  ++   C
Sbjct: 61  FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPES 484
           +   L++A +LL    C        TS  +    CKA   ++A   L  +VE    KP+ 
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITS--VARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
            +W +++   C+  ++  A+E+L+ LV
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLV 202



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TF++++ GLC+ G++ EA+    ++       N     ++L   CQ G++++A+ + R +
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI 64

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK--PESDSWALLVELICRGR 498
            C    P   T N L+   C+  +  D A+ LF  +E  F   PE+ ++  +++  C+  
Sbjct: 65  QCS---PSVITLNILINGFCELQLL-DKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120

Query: 499 KLLFAFELLDELVIKESGTIQV 520
           +L  A +LL+E     S  I +
Sbjct: 121 RLDQARQLLEESSCCSSDVIAI 142



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 41/212 (19%)

Query: 82  FNTVSEQKG--FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           F  V + K      +  TY T++D L +  +   V  V  +M  E C             
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGC------------- 313

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
                                   PS+   +T ++   ++  +  AQ  ++ S     + 
Sbjct: 314 -----------------------NPSVVTYTTLVHAHCKAGSLQDAQQVIR-SMVAKGIP 349

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + +L++   + G + +A E  +++ + +   P  + YS L+ G CK     EA++
Sbjct: 350 PDVTTYTVLLEGLFENGKVRTATEFFEKILRERCP-PCAVVYSALVRGCCKAALVDEAVK 408

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            + EM+ + ++ PD  T  +L++  C+ G+ D
Sbjct: 409 YYVEMLDR-RLAPDPATCKLLVEMLCKRGRTD 439


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 225/487 (46%), Gaps = 42/487 (8%)

Query: 65  AISLIKCEKEPQCALEIFN-TVSEQKG---FNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           A S   C   P  A+ +FN   S  +G    +  + TYA ++D   R  + E   A   Q
Sbjct: 90  APSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQ 149

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           +     + +  I  +L++ F      +  L++     P     P + + S  L  L +  
Sbjct: 150 LLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 209

Query: 181 QVDLAQNFLKYSNQHLRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +   A + L+   +   +  PN   +N +I    K G +  A ++ KEM +  +  P+L+
Sbjct: 210 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP-PDLV 268

Query: 240 TYSTLIDGLCK-----------------------------------NGRFREAIELFEEM 264
           TY++++  LCK                                    G+++EA+ +F+EM
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  ILPD +T ++L+   C+ GK+  A+ + + M   G NP+VF+Y  ++NG+  +G 
Sbjct: 329 -RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 387

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +  ++FD M    + PD   +  LI  +   G +D+A+ +  EM++ G K D+VT+  
Sbjct: 388 LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 447

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR GK+++A+    ++   G+  +K +Y  ++   C  G L KA EL+  ++  G
Sbjct: 448 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 507

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                   + ++  LCK G   DA       V +G  P++  +++L++  C   K+  A 
Sbjct: 508 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 567

Query: 505 ELLDELV 511
            + D +V
Sbjct: 568 RVFDAMV 574



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 216/410 (52%), Gaps = 11/410 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+T++  KG N +  +Y  +L+  A       +  +   M  +        F  L+
Sbjct: 356 ARDVFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 414

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQ 194
           K ++NC + ++ + +F+++  H +   KP +    T +  L    ++D A + F +  +Q
Sbjct: 415 KAYANCGMLDKAMIIFNEMRDHGV---KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 471

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            +   P+   +N LI+  C  G+L  A E++ E+  + M + +++ +S++I+ LCK GR 
Sbjct: 472 GV--APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM-HLDIVFFSSIINNLCKLGRV 528

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  +F+  V+   + PDA+ Y++L+DG+C  GK+++A ++ + M + G  PNV  Y T
Sbjct: 529 MDAQNIFDLTVNVG-LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 587

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G++ E   +F EM    +KP TI Y+ +I+   +AGR   A     EM E G
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESG 647

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI T+NI+L GL +    +EA+ + ++L    + +N  +   +++   Q   +E+A 
Sbjct: 648 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 707

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +L   +     +P+  T + ++  L K G+ E+A      +   G +P S
Sbjct: 708 DLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 757



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 188/405 (46%), Gaps = 76/405 (18%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY +++  L + +  +  +A LRQM  +    +   + NL+  +S+    +
Sbjct: 260 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 319

Query: 148 RVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNF-----LKYSNQHL---- 196
             + +F ++  H I    P +  +S  +  L +  ++  A++      +K  N  +    
Sbjct: 320 EAVRVFKEMRRHSIL---PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 376

Query: 197 -------------------------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     + P+   FN+LIK +   G L+ A  +  EM+  
Sbjct: 377 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 436

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  P+++TY T+I  LC+ G+  +A+E F +M+ +  + PD   YN LI GFC  G + 
Sbjct: 437 GVK-PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLL 494

Query: 292 RAKKIMEFMKNNG-----------------------------------CNPNVFNYTTLM 316
           +AK+++  + NNG                                    +P+   Y+ LM
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+C  GK+++A  VFD M +  ++P+ + Y TL+N +C+ GR+DE L L +EM +RG K
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 614

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
              + ++II+ GL + G+   A     ++   GI ++  +Y IVL
Sbjct: 615 PSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 173/396 (43%), Gaps = 42/396 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IFN + +  G   +  TY T++  L R  K +       QM  +     +  +  L+
Sbjct: 426 AMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 484

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQH 195
           + F  C+ H  +L+    I  I      L  +  S+ +N L +  +V  AQN    +  +
Sbjct: 485 QGF--CT-HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT-VN 540

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P+  ++++L+  +C  G +E A  V   M  + +  PN++ Y TL++G CK GR  
Sbjct: 541 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE-PNVVVYCTLVNGYCKIGRID 599

Query: 256 EAIELFEEMVSKD--------QILPDAL--------------------------TYNVLI 281
           E + LF EM+ +          I+ D L                          TYN+++
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G  +    D A  + + ++      N+    T+++G  +  +++EAK++F  +    L 
Sbjct: 660 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 719

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ + Y+ +I    + G V+EA ++   M+  GC+ +    N ++  L ++ +I  A   
Sbjct: 720 PNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAY 779

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           L K+      L   +  ++++    KG   + I  L
Sbjct: 780 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF    S+ Q    + P + TY +L+D   R  + + A      +   G   N+   
Sbjct: 103 AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 162

Query: 313 TTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             L+ GFC+  +  EA ++           PD   Y+ L+   C  G+  +A +LL+ M 
Sbjct: 163 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 222

Query: 372 ERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           E G  C  ++V +N ++ G  +EG + +A  + +++   GI  +  +Y  V++  C+   
Sbjct: 223 EGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 282

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           ++KA   LR M+ +  LP+  T N L+      G  ++A      +      P+  + ++
Sbjct: 283 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 342

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A ++ D + +K
Sbjct: 343 LMGSLCKYGKIKEARDVFDTMAMK 366


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 194/372 (52%), Gaps = 10/372 (2%)

Query: 132 IFLN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           I LN L+  F    L ++ LE+FH++       P     +  +    + +++D A+  L+
Sbjct: 71  ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE 130

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            S+       +      + +  CK   ++ A+++L +M + + + P+++ ++ +I G CK
Sbjct: 131 ESSC---CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCK 187

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM--KNNGCNPN 308
            GR REA E+ E +VS   + P+A+TY  LIDGFC+ G +  A ++ + +  +++   PN
Sbjct: 188 AGRVREAYEMLETLVSMGCV-PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           V  +  L++G CK  +L+ A E+  +MK   L+ DT  YTTL++  C+ GR  E   + +
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFE 306

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM   GC   +VT+  ++   C+ G +++A  ++  +   GI  +  +Y ++L    + G
Sbjct: 307 EMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENG 366

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVR-LCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           ++  A E    +L R   P  A     LVR  CKA + ++A      +++    P+  + 
Sbjct: 367 KVRTATEFFEKIL-RERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATC 425

Query: 488 ALLVELIC-RGR 498
            LLVE++C RGR
Sbjct: 426 KLLVEMLCKRGR 437



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 181/351 (51%), Gaps = 10/351 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L+ I+  L  L ++  +D A    +     ++  P+    NILI   C+   L+ A E
Sbjct: 36  PNLRDINLLLASLCQAGTMDQAMAIFR----GIQCSPSVITLNILINGFCELQLLDKALE 91

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  EM+K+    P   TY+ +I   CK  R  +A +L EE         D +    +  G
Sbjct: 92  LFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSS---DVIAITSVARG 148

Query: 284 FCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           FC+  +VD A +++ + ++     P++  +  +++GFCK G+++EA E+ + + +    P
Sbjct: 149 FCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVP 208

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD--IVTFNIILGGLCREGKIEEALG 400
           + + YTTLI+ FC++G + EAL+L K +  R   A+  +VTFN ++ GLC+  ++E A  
Sbjct: 209 NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFE 268

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +++++    +  +  +Y  +++  C++G   +   +   ML  G  P   T   L+   C
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           KAG  +DA   +  +V  G  P+  ++ +L+E +    K+  A E  ++++
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKIL 379



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 169/317 (53%), Gaps = 9/317 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN    N+L+   C+ GT++ A  + + ++ S    P++IT + LI+G C+     +A+E
Sbjct: 36  PNLRDINLLLASLCQAGTMDQAMAIFRGIQCS----PSVITLNILINGFCELQLLDKALE 91

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM     ++P+A TY  +I  +C+  ++D+A++++E  +++ C+ +V   T++  GF
Sbjct: 92  LFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGF 149

Query: 320 CKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           CK  ++ EA ++  D ++    KPD + +  +I+ FC+AGRV EA E+L+ +   GC  +
Sbjct: 150 CKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPN 209

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL--NKASYRIVLNFSCQKGELEKAIEL 436
            VT+  ++ G C+ G + EAL + + L     +   N  ++  +++  C+   LE A EL
Sbjct: 210 AVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFEL 269

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           ++ M  R       T   L+  LCK G   + +     ++  G  P   ++  LV   C+
Sbjct: 270 VKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCK 329

Query: 497 GRKLLFAFELLDELVIK 513
              L  A +++  +V K
Sbjct: 330 AGSLQDAQQVIRSMVAK 346



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 153/301 (50%), Gaps = 42/301 (13%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN  T+S LI GLCK GR  EA+E + +M+ +   +P+    N+L+   C+ G +D+A  
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLER-HCVPNLRDINLLLASLCQAGTMDQA-- 57

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINC- 353
            M   +   C+P+V     L+NGFC+   L +A E+F EM KNF L P+   YT +I C 
Sbjct: 58  -MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCY 116

Query: 354 --------------------------------FCRAGRVDEALELLKEMKE-RGCKADIV 380
                                           FC+A RVDEA +LL +M E +  K DIV
Sbjct: 117 CKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIV 176

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +N+I+ G C+ G++ EA  MLE L   G   N  +Y  +++  C+ G L +A++L +++
Sbjct: 177 AWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVL 236

Query: 441 LCRGFL--PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-G 497
             R     P+  T N L+  LCKA   E A   +  +     + ++ ++  L++ +C+ G
Sbjct: 237 SSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQG 296

Query: 498 R 498
           R
Sbjct: 297 R 297



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 106/207 (51%), Gaps = 7/207 (3%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           PN F ++ L+ G CK G+L EA E +++M      P+      L+   C+AG +D+A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-SYRIVLNFSC 425
            + ++   C   ++T NI++ G C    +++AL +  ++  +   + +A +Y  ++   C
Sbjct: 61  FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPES 484
           +   L++A +LL    C        TS  +    CKA   ++A   L  +VE    KP+ 
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITS--VARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
            +W +++   C+  ++  A+E+L+ LV
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLV 202



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TF++++ GLC+ G++ EA+    ++       N     ++L   CQ G +++A+ + R +
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI 64

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK--PESDSWALLVELICRGR 498
            C    P   T N L+   C+  +  D A+ LF  +E  F   PE+ ++  +++  C+  
Sbjct: 65  QCS---PSVITLNILINGFCELQLL-DKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120

Query: 499 KLLFAFELLDELVIKESGTIQV 520
           +L  A +LL+E     S  I +
Sbjct: 121 RLDQARQLLEESSCCSSDVIAI 142



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 41/212 (19%)

Query: 82  FNTVSEQKG--FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           F  V + K      +  TY T++D L +  +   V  V  +M  E C             
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGC------------- 313

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
                                   PS+   +T ++   ++  +  AQ  ++ S     + 
Sbjct: 314 -----------------------NPSVVTYTTLVHAHCKAGSLQDAQQVIR-SMVAKGIP 349

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + +L++   + G + +A E  +++ + +   P  + YS L+ G CK     EA++
Sbjct: 350 PDVTTYTVLLEGLFENGKVRTATEFFEKILRERCP-PCAVVYSALVRGCCKAALVDEAVK 408

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            + EM+ + ++ PD  T  +L++  C+ G+ D
Sbjct: 409 YYVEMLDR-RLAPDPATCKLLVEMLCKRGRTD 439


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 166/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   + ++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 163/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +   AD++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 148/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLR-PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M +NG  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L  D I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 158/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +       T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 233/518 (44%), Gaps = 72/518 (13%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++++ + + + AL+ F     Q  + H+   Y ++L+ L++ K  +    VL  M     
Sbjct: 179 AVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGI 238

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
                 F  +M  +S        L++   +     E P+L   +T +++ + +N+++ A 
Sbjct: 239 YRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVE-PNLLICNTTIDVFVRANRLEKAL 297

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL--------------------- 225
            FL+   Q + + PN   +N +I+ +C    +E A E+L                     
Sbjct: 298 RFLE-RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356

Query: 226 --------------KEMKKSQMSYPNLITYSTLID------------------------- 246
                         K+M K     P+ +TY+TLI                          
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416

Query: 247 ----------GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
                      LCK GR  EA +L  EM+SK    PD +TY  +++GFCR G+VD+AKK+
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           ++ M  +G  PN  +YT L+NG C+ GK  EA+E+ +  +     P++I Y+ +++   R
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++ EA ++++EM  +G     V  N++L  LCR+G+  EA   +E+    G  +N  +
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           +  V++  CQ  EL+ A+ +L  M          T   L+  L K G   +A   +  ++
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             G  P   ++  ++   C+  K+     +L++++ ++
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 694



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 141/332 (42%), Gaps = 42/332 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ N +SE+  ++ N+ TY+ I+  L R  K      V+R+M  +   F   + +NL+
Sbjct: 508 AREMMN-MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF-FPGPVEINLL 565

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                             +    R   + K +  CLN     N V+              
Sbjct: 566 ---------------LQSLCRDGRTHEARKFMEECLNKGCAINVVN-------------- 596

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
                  F  +I   C+   L++A  VL +M      + ++ TY+TL+D L K GR  EA
Sbjct: 597 -------FTTVIHGFCQNDELDAALSVLDDMYLIN-KHADVFTYTTLVDTLGKKGRIAEA 648

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL ++M+ K  I P  +TY  +I  +C+ GKVD    I+E M +      ++N   ++ 
Sbjct: 649 TELMKKMLHKG-IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYN--QVIE 705

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C  GKL+EA  +  ++     + D      L+  + + G    A ++   M  R    
Sbjct: 706 KLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 765

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           D+     +   L  +GK++EA  ++ +L   G
Sbjct: 766 DVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 224/467 (47%), Gaps = 44/467 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+  +++  KG   +N  YAT++D   R K+     ++L +M     K     +  L+
Sbjct: 286 ALELKRSMA-NKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQH 195
             F   S    +   F     +   K  L   +    ++ L +   ++ A++        
Sbjct: 345 NGFVKQS---DIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTM- 400

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-------------------- 235
           + +KP+   +N LI+ + K   +E A+E+L E+KK  ++                     
Sbjct: 401 MGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTR 460

Query: 236 --------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL-PDALTYNVL 280
                         PN++ Y+T++ GL K GRF EAI++   M  KDQ L PD   YN +
Sbjct: 461 ANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVM--KDQGLSPDVFCYNTV 518

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I GFC+ GK++  K  +  M   G  PNV+ Y   ++G+C+ G++Q A+  F EM +  +
Sbjct: 519 IIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGI 578

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P+ +  T LI+ +C+ G   +A    + M ++G   D+ T ++++ GL + GK++EA+G
Sbjct: 579 APNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMG 638

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +  +L   G+  +  +Y  +++  C++G+L+ A EL   M  +G  P+  T N L+  LC
Sbjct: 639 VFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLC 698

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           K G    A     G+ E G    S +++ ++   C+   L  AF+L 
Sbjct: 699 KLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLF 745



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 204/425 (48%), Gaps = 6/425 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+KG   N  TY+ ++  L R    +    + R M  +       I+  L+  F      
Sbjct: 259 EEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRS 318

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIF 205
                M  +++ +   KP   A +  +N  ++  Q D+   F +K      ++K NT  +
Sbjct: 319 TEGKSMLDEMYTMGL-KPDHVAYTALINGFVK--QSDIGGAFQVKEEMFARKIKLNTFTY 375

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   CK G LE A ++  EM    +  P++ TY+ LI+G  K     +A EL  E +
Sbjct: 376 YALIHGLCKIGDLEKAEDLFSEMTMMGIK-PDIQTYNCLIEGYYKVQNMEKAYELLIE-I 433

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K+ +  +A     +++G C  G + RA ++ + M + G  PN+  YTT++ G  KEG+ 
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EA ++   MK+  L PD   Y T+I  FC+AG+++E    L EM  +G K ++ T+   
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G CR G+++ A     ++   GI  N      +++  C+ G   KA    R ML +G 
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGV 613

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           LP   T + L+  L K G  ++A      L++ G  P+  ++  L+  +C+   L  AFE
Sbjct: 614 LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFE 673

Query: 506 LLDEL 510
           L D++
Sbjct: 674 LHDDM 678



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 201/422 (47%), Gaps = 5/422 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY  +++   + +  E    +L ++  E    +  +   ++    +C    R 
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            E+F ++      KP++   +T +  L++  + + A   L        L P+   +N +I
Sbjct: 462 NELFQEMISWGL-KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQ-GLSPDVFCYNTVI 519

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G +E     L EM    +  PN+ TY   I G C+ G  + A   F EM+    
Sbjct: 520 IGFCKAGKMEEGKSYLVEMIAKGLK-PNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG- 577

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ +    LIDG+C+ G   +A      M + G  P+V  ++ L++G  K GKLQEA 
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            VF E+ +  L PD   YT+LI+  C+ G +  A EL  +M ++G   +IVT+N ++ GL
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+ G+I +A  + + +   G+  N  +Y  ++   C+   L +A +L   M   G  P  
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
                L+   CKAG  E A     G+VE G    + ++  L++   +  KL+ A++L+++
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVED 816

Query: 510 LV 511
           +V
Sbjct: 817 MV 818



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 165/312 (52%), Gaps = 3/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+    ++LI    K G L+ A  V  E+    +  P++ TY++LI  LCK G  + A E
Sbjct: 615 PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGL-VPDVFTYTSLISNLCKEGDLKAAFE 673

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L ++M  K  I P+ +TYN LI+G C+ G++ +A+++ + +   G   N   Y+T++ G+
Sbjct: 674 LHDDMCKKG-INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK   L EA ++F  MK   + PD+  Y  LI+  C+AG  ++AL L   M E G  A  
Sbjct: 733 CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-AST 791

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             FN ++ G  + GK+ EA  ++E +  + I  N  +Y I++ + C  G +++A +L   
Sbjct: 792 PAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFME 851

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  R  +P+  T   LL    + G   +       +V  G KP+  +W+++V+   +   
Sbjct: 852 MQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGN 911

Query: 500 LLFAFELLDELV 511
            + A +L+D+++
Sbjct: 912 WIKALKLVDDML 923



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 148/279 (53%), Gaps = 3/279 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  N+  ++ +I  +CK   L  AF++   MK   +  P+   Y  LIDG CK G   +A
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVP-PDSFVYCALIDGCCKAGNTEKA 776

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF  MV  ++ +     +N LIDGF + GK+  A +++E M +N   PN   YT L+ 
Sbjct: 777 LSLFLGMV--EEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIE 834

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C  G ++EA+++F EM+   + P+ + YT+L++ + R GR  E   L  EM  RG K 
Sbjct: 835 YHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D + +++++    +EG   +AL +++ +  +G+ + K  Y I+++  C+   L + +++L
Sbjct: 895 DDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVL 954

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
             +  +G     AT   L+    +AG  ++A   L  +V
Sbjct: 955 DEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 145/307 (47%), Gaps = 3/307 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F ILI  + K+G L  A  V    K ++     L   ++L   L K  R     ++++ M
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEF-IVGLACCNSLSKDLLKGNRVELFWKVYKGM 224

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +    I+PD  TY  LI+ +CR GKV+  K ++  M+  GC PN+  Y+ ++ G C+ G 
Sbjct: 225 LG--AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGD 282

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA E+   M N  L PD   Y TLI+ FCR  R  E   +L EM   G K D V +  
Sbjct: 283 VDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTA 342

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G  ++  I  A  + E+++   I LN  +Y  +++  C+ G+LEKA +L   M   G
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N L+    K    E A   L  + +      +     +V  +C    L  A 
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRAN 462

Query: 505 ELLDELV 511
           EL  E++
Sbjct: 463 ELFQEMI 469



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 18/299 (6%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F+ + E KG   N+ TY+TI+    +         +   M          ++  L+
Sbjct: 706 ARELFDGIPE-KGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALI 764

Query: 138 KHFSNCSLHERVLEMF-HKIHPITREKPSLKAISTC---LNLLIESNQV--DLAQNFLKY 191
                    E+ L +F   +       P+  A+      L  LIE+ Q+  D+  N    
Sbjct: 765 DGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDN---- 820

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                 + PN   + ILI++HC  G ++ A ++  EM+K  +  PN++TY++L+ G  + 
Sbjct: 821 -----HITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNV-MPNVLTYTSLLHGYNRI 874

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  E   LF+EMV++  I PD L ++V++D   + G   +A K+++ M + G N     
Sbjct: 875 GRRSEMFSLFDEMVARG-IKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNL 933

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           YT L++  CK   L E  +V DE++    K       TL+ CF RAGR DEAL +L+ M
Sbjct: 934 YTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 16/278 (5%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           NL T+S L   LC +G F  A  + E M+       D    +V I        +D   K 
Sbjct: 106 NLSTFSILSLILCNSGLFGNAANVLERMI-------DTRNPHVKI--------LDSIIKC 150

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            + +  +  + +V  +  L++ + K+G L EA  VF   K            +L     +
Sbjct: 151 YKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLK 210

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
             RV+   ++ K M       D+ T+  ++   CR GK+EE   +L  +   G   N  +
Sbjct: 211 GNRVELFWKVYKGML-GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVT 269

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y +V+   C+ G++++A+EL R M  +G LP       L+   C+   + +    L  + 
Sbjct: 270 YSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMY 329

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            MG KP+  ++  L+    +   +  AF++ +E+  ++
Sbjct: 330 TMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARK 367


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 151/250 (60%), Gaps = 2/250 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  EA
Sbjct: 167 LRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQ-PDVYTYSVLINGLCKESKMDEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF EM+  + ++P+ +T+  LIDG C+ G+VD A +I + + + G +P++  Y TL+ 
Sbjct: 226 NELFNEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIF 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A+++ DEM    LKPD I YTTLI+  C+ G ++ A E  K M +   + 
Sbjct: 285 GLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML  +   G+  +  +Y +++N  C+KG+++   +LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLL 404

Query: 438 RLMLCRGFLP 447
           + M   G +P
Sbjct: 405 KEMXRDGHVP 414



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 193/351 (54%), Gaps = 7/351 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP-NTCIFNILIKHHCKRGTLES 220
           ++  +   S  +   +ES  +  A  F + + +H    P +TC    +++H  K    + 
Sbjct: 62  QRSDIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTC--RKVLEHLMKLKYFKL 119

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            +   KE+   +  YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N 
Sbjct: 120 VWGFYKEI--LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDA-ITKWGLRPSVVSFNT 176

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L+ G+ R G +D   ++   M  +G  P+V+ Y+ L+NG CKE K+ EA E+F+EM +  
Sbjct: 177 LMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNG 236

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + +TTLI+  C+ GRVD A+E+ K++  +G   D++T+N ++ GLC++G +++A 
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQAR 296

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +++++    +  +K +Y  +++ SC++G+LE A E  + M+             L+  L
Sbjct: 297 DLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           C+ G + DA   L G++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 357 CQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEM 407



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 146/278 (52%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P++++++TL+ G  + G   E   L   M
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDAITKWGLR-PSVVSFNTLMSGYIRLGDLDEGFRLKSAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++   M +NG  PN   +TTL++G CK G+
Sbjct: 198 HASG-VQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ ++ +    PD I Y TLI   C+ G + +A +L+ EM  +  K D +T+  
Sbjct: 257 VDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G  +  +  L  +   G  P
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVP 414



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 152/302 (50%), Gaps = 25/302 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           + +  + F  + E K +Q S  ++  +S LI    ++G  R+AIE F         +P  
Sbjct: 45  KDSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFD 102

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         K+I+E     G   +++ +  LM+ FCKEG
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGF--------YKEILE----CGYPASLYFFNILMHRFCKEG 150

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +++ A+ VFD +  + L+P  + + TL++ + R G +DE   L   M   G + D+ T++
Sbjct: 151 EMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYS 210

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K++EA  +  ++  +G+  N  ++  +++  C+ G ++ A+E+ + +L +
Sbjct: 211 VLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQ 270

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           GF P   T N L+  LCK G  + A   +  +     KP+  ++  L++  C+   L  A
Sbjct: 271 GFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETA 330

Query: 504 FE 505
           FE
Sbjct: 331 FE 332


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 199/403 (49%), Gaps = 45/403 (11%)

Query: 154 HKIHPIT-REKPSLKA--ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI----FN 206
           H +H +  R  P+L    + T L   + +NQ  LA  F  + N+ +       I    +N
Sbjct: 84  HALHSLLLRPNPALSKPLLDTSLAAYVHANQPHLA--FQLFQNELIXXXXXXSIDVWTYN 141

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L+K  C  G ++ A  V  EM+  ++  P+++TY+TLIDG  K     E   L EEM S
Sbjct: 142 TLVKGLCDEGKIDEAIRVRDEMESLKL-IPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKS 200

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  + P+A+T+N+++  F + GK++ A   +  M  +G +P+ F Y T++NGFCK GKL 
Sbjct: 201 RGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLG 260

Query: 327 EAKEVFDEMKNFLLKPDT-----------------------------------IGYTTLI 351
           EA  + DEM    LKPD                                    + Y TLI
Sbjct: 261 EAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLI 320

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             + +  + D+AL+L +EMK+RG    +V++N ++ GLC  GK ++A+  L +L   G+ 
Sbjct: 321 MGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLV 380

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            ++ S  I+++  C +G ++KA +    M+   F P   T N LL  LC+  M E A   
Sbjct: 381 PDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKL 440

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
               +      +  ++  ++  +C+  +L  AF+L+ ++ +K+
Sbjct: 441 FNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKK 483



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 146/282 (51%), Gaps = 2/282 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N +I   CK G L  AF ++ EM +  +  P++ T +T++  LC   +  EA
Sbjct: 239 VSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLK-PDICTLNTMLHTLCMEKKPEEA 297

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL  +   +  IL D +TY  LI G+ +G + D+A K+ E MK  G  P+V +Y  L+ 
Sbjct: 298 YELTVKARKRGYIL-DEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIR 356

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  GK  +A +  +E+    L PD +    +I+ +C  G VD+A +   +M     K 
Sbjct: 357 GLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKP 416

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI T NI+L GLCR   +E+A  +          ++  +Y  ++++ C++G L++A +L+
Sbjct: 417 DIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLM 476

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
             M  + F P   T N ++  L  AG  E+A   +  L E G
Sbjct: 477 TDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETG 518



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 39/342 (11%)

Query: 194 QHLRLKPNTCIFNILIKHHCK-RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           + L+L P+   +N LI    K RG+ E  F +L+EMK      PN +T++ ++    K G
Sbjct: 164 ESLKLIPDVVTYNTLIDGCFKWRGSTE-GFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEG 222

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EA +   +MV +  + PD  TYN +I+GFC+ GK+  A ++M+ M   G  P++   
Sbjct: 223 KINEASDAVVKMV-ESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTL 281

Query: 313 TTLMNGFCKEGKLQEAKEV-----------------------------------FDEMKN 337
            T+++  C E K +EA E+                                   ++EMK 
Sbjct: 282 NTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKK 341

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             + P  + Y  LI   C +G+ D+A++ L E+ E+G   D V+ NII+ G C EG +++
Sbjct: 342 RGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDK 401

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A     K+  +    +  +  I+L   C+   LEKA +L    + +       T N ++ 
Sbjct: 402 AFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMIS 461

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSW-ALLVELICRGR 498
            LCK G  ++A   +  +    F+P+  ++ A++  L   GR
Sbjct: 462 YLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGR 503



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 126/264 (47%), Gaps = 49/264 (18%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +  LI  + K    + A ++ +EMKK  +  P++++Y+ LI GLC +G+  +A++ 
Sbjct: 312 DEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGI-VPSVVSYNPLIRGLCLSGKTDQAVDK 370

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             E++ K  ++PD ++ N++I G+C  G VD+A +    M  N   P++F    L+ G C
Sbjct: 371 LNELLEKG-LVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLC 429

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +   L++A ++F+   +     D + Y T+I+  C+ GR+DEA +L+ +M+ +  + D  
Sbjct: 430 RVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQY 489

Query: 381 TFNII-----------------------------------------------LGGLCREG 393
           T+N I                                               +  LC +G
Sbjct: 490 TYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQG 549

Query: 394 KIEEALGMLEKLWYDGIYLNKASY 417
           K +EA+ + ++    G+ LNK +Y
Sbjct: 550 KYKEAMKLFQESEQKGVSLNKYTY 573



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 18/182 (9%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+    NIL++  C+   LE AF++       Q S  +++TY+T+I  LCK GR  EA
Sbjct: 414 FKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSV-DVVTYNTMISYLCKEGRLDEA 472

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN------ 311
            +L  +M  K +  PD  TYN ++      G+ + A+K M  +   G      +      
Sbjct: 473 FDLMTDMEVK-KFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELD 531

Query: 312 ------YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR----AGRVD 361
                 Y+  ++  C +GK +EA ++F E +   +  +   Y  L++ F +      +VD
Sbjct: 532 ASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRKSISKVD 591

Query: 362 EA 363
            A
Sbjct: 592 HA 593



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 16/112 (14%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS-----------QMSYPNLITYSTLI 245
           + +P+   +N +++     G  E A + + ++ ++           ++   + I YS  I
Sbjct: 483 KFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQI 542

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG----GKVDRA 293
             LC  G+++EA++LF+E   K   L +  TY  L+DGF +      KVD A
Sbjct: 543 SDLCTQGKYKEAMKLFQESEQKGVSL-NKYTYIKLMDGFLKRRKSISKVDHA 593


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 152/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P+  TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDXYTYSVLINGLCKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K   LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRNGHVPSVVTYNVLM 429



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+ + Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +     LL E+
Sbjct: 376 REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEM 413



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CK GR   A+E+++ M+S+  +LPD +TYN LI
Sbjct: 232 NELFDEMLVKGL-VPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  +G   +  +Y +++N
Sbjct: 410 LKEMQRNGHVPSVVTYNVLMN 430



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P     S  +N L + +++D A       ++ L   L PN   F  LI  HCK+G ++ 
Sbjct: 209 QPDXYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVTFTTLIDGHCKKGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K M  SQ   P+LITY+TLI GLCK G  ++A +L +EMV K  + PD +TY  L
Sbjct: 266 AMEIYKRML-SQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKG-LKPDKITYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPDT  YT +IN FC+ G V +   LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 147/321 (45%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +  F EA  L + +VS+                      D  +   
Sbjct: 18  TLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIME-FMKNN---------------G 304
           L    L  GF R                  D  +K++E  MK                 G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D  T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 198 RLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+KG ++ A+E+ + ML +  LP   T N L+  LCK G  + A   +  +V  G KP+ 
Sbjct: 258 CKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFE 338



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD 108

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGF--------YEEILE----CGYPASLYFFNILMHRFCKDG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D  T++
Sbjct: 157 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+KG ++ A+E+ + ML +
Sbjct: 217 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G  + A                                   
Sbjct: 277 SLLPDLITYNTLIYGLCKKGDLKQAN---------------------------------- 302

Query: 504 FELLDELVIK 513
            +L+DE+V+K
Sbjct: 303 -DLIDEMVMK 311


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 199/437 (45%), Gaps = 40/437 (9%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           SH AA+  ++  K    A+  F    EQ GF H+  TY  +++ L   K +    A+  +
Sbjct: 87  SHVAAV--LRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEE 144

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           M       +   F  L++ F+                   R + +  A+ TC  ++    
Sbjct: 145 MLKAGIAPNTFSFNILIRSFA-------------------RTRRADDAV-TCFEIM---- 180

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
                        +  R KP+   F IL+   CK G  E AFEV  EM       P+   
Sbjct: 181 -------------KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRAL 227

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           ++ ++  L K  R +EA E+F +M  K    PDA+ YN +IDG  + G    A K+++ M
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
               C P    Y  L+N  CK G L+ A+E+F  M     +P+++ YT+LI+ F ++GR+
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            EA  L  EM E G + D++T  +++ GLC+ G  E+A    E++   G   N  +Y  +
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +    + G +  A  +++ M+  G  P   T   LL   CK G  ++AA  L  L +   
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466

Query: 481 KPESDSWALLVELICRG 497
            P    ++ LV+ +C G
Sbjct: 467 SPNLQLYSSLVKGLCDG 483



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 224/490 (45%), Gaps = 43/490 (8%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H A +  +   K  + A E+F  + E+ GF  +   Y T++D LA+    +    VL  M
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
             + C   E  +  L+         ER  E+F ++   +  +P+    ++ ++   +S +
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELF-RVMAASGFRPNSVIYTSLIHGFAKSGR 345

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           +  A +      +    +P+     ++I   CK G  E A +  +EM +     PN++TY
Sbjct: 346 MKEACSLFDEMVE-AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK-PNVVTY 403

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           +T+I GL K GR   A  + + M++     PD++TY  L+DGFC+ G++D A ++++ + 
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHG-CFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462

Query: 302 NNGCNPNVFNYTTLMNGFC------------------------------------KEGKL 325
               +PN+  Y++L+ G C                                    K G+L
Sbjct: 463 KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRL 522

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA--GRVDEALELLKEMKERGCKADIVTFN 383
            EA  +F  M +   KPD   Y  LIN  CR+   RV+ A  LL +++  G   D VT+ 
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYT 582

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            +  GLC+ G+++ A+ MLE+    G   +  +Y  +    C +G++++A+ L + M+ +
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P  A    ++  L K    EDA      ++  G KP   ++  LV+ +C    +  A
Sbjct: 643 GGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702

Query: 504 FELLDELVIK 513
           F   + ++ +
Sbjct: 703 FHRFEGMLAR 712



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 204/452 (45%), Gaps = 15/452 (3%)

Query: 48  DTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
           D  V+A  R   I+H   I  +      + A + F  +  + G   N  TY TI+  L++
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM-RGGCKPNVVTYTTIIQGLSK 412

Query: 108 YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK 167
             +      +++ M    C      ++ L+  F      +   ++  ++   +   P+L+
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS-SSPNLQ 471

Query: 168 AISTCLNLLIESNQVD--LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
             S+ +  L +   V+  L   F +       L P  C    +I   CK G L+ A  + 
Sbjct: 472 LYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCS--IIVGLCKTGRLDEACRIF 529

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKN--GRFREAIELFE--EMVSKDQILPDALTYNVLI 281
           + M  S+   P+  TY+ LI+GLC++   R   A  L    EMV     LPDA+TY  L 
Sbjct: 530 QRMV-SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVG---YLPDAVTYTPLC 585

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G+VDRA K++E   + G N +V  YT L  G C +G++  A  +F EM      
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD   Y  +IN   +  ++++A +   EM  +G K  + T+  ++  LC  G ++EA   
Sbjct: 646 PDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705

Query: 402 LEKLWYDGIYLNKAS-YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
            E +   G  +     Y  +++  C+  +++ A++L   M+ RG +P   TS  L   L 
Sbjct: 706 FEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           ++G  E A   L  +   G  P + ++  +++
Sbjct: 766 RSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 161/328 (49%), Gaps = 3/328 (0%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A +F +++ +    + +   +N L+            + + +EM K+ ++ PN  +++ L
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIA-PNTFSFNIL 160

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNN 303
           I    +  R  +A+  FE M  K +  PD  T+ +L+D  C+ G  ++A ++  E M   
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
              P+   +T ++    K  +++EA+EVF +M+     PD I Y T+I+   +AG   EA
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           L++L  M  + C    VT+ I++  LC+ G +E A  +   +   G   N   Y  +++ 
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             + G +++A  L   M+  G+ P   T   ++  LCK+G  E AA +   ++  G KP 
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             ++  +++ + +  ++  AF ++  ++
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMI 427



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 140/281 (49%), Gaps = 10/281 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           KP     +  +N L  S +  + + F L +  + +   P+   +  L    CK G ++ A
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRA 597

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++L+E   S+    +++ Y+ L  GLC  G+   A+ LF+EMV +    PDA  Y  +I
Sbjct: 598 VKMLEE-ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA-PDAAAYCCII 655

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           +G  +G K++ A K  + M   G  P V  YT L+   C  G + EA   F   +  L +
Sbjct: 656 NGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA---FHRFEGMLAR 712

Query: 342 PDTIG----YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
            + +G    Y  LI+ FC+A +VD AL+L ++M  RG     VT   +  GL R GK E+
Sbjct: 713 GELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK 772

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           A  +L+++   G   + A++  +L+   +  E  K ++L++
Sbjct: 773 AQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQ 813



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 7/293 (2%)

Query: 100 TILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF--SNCSLHERVLEMFHKIH 157
           +I+  L +  + +    + ++M  E CK     +  L+     S  +  ER   + H + 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +     ++     C+ L  +  +VD A   L+ ++       +   +  L    C +G 
Sbjct: 571 MVGYLPDAVTYTPLCIGL-CKIGEVDRAVKMLEEASSR-GWNADVVAYTALCTGLCYQGQ 628

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           ++ A  + +EM + Q   P+   Y  +I+GL K  +  +A + F+EM+ K Q  P   TY
Sbjct: 629 VDRAVSLFQEMVR-QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQ-KPTVATY 686

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
             L+   C  G VD A    E M   G    +V  Y  L++GFCK  K+  A ++F++M 
Sbjct: 687 TALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMI 746

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +    P  +   +L +   R+G+ ++A ELL+EM   G      TF  IL GL
Sbjct: 747 SRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           CI N LIK       LE A +   EM  K Q   P + TY+ L+  LC  G   EA   F
Sbjct: 653 CIINGLIKGK----KLEDACKFFDEMIGKGQK--PTVATYTALVQALCHAGNVDEAFHRF 706

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           E M+++ +++   + Y+ LI GFC+  KVD A K+ E M + G  P      +L +G  +
Sbjct: 707 EGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            GK ++A+E+  EM      P    +T +++   ++   DE+ +LLK ++E
Sbjct: 767 SGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS---DESGKLLKLVQE 814



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 38/212 (17%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G   +VF Y  LMN    E    +   + +EM    + P+T  +  LI  F R  R D+A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           +   + MK + CK D+ TF I++  LC+ G  E                           
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE--------------------------- 206

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR-LCKAGMAEDAAIALFGLVEM-GFK 481
                   KA E+   M+  GF+P     +  +VR L KA   ++A   +FG +E  GF 
Sbjct: 207 --------KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAR-EVFGQMEKCGFP 257

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P++ ++  +++ + +      A ++LD ++ K
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 206/437 (47%), Gaps = 52/437 (11%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT------------ 122
           P+  LEIFN  S+Q+ F  +   Y  ++  L+R + ++   + L ++             
Sbjct: 84  PEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGE 143

Query: 123 ----YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR----------------- 161
               ++   F   +F  ++K ++   L +  L +F  +    R                 
Sbjct: 144 LVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRK 203

Query: 162 -----------------EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
                              P +   S  +N    S  VD A  F K +   L L+ N   
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N LI  +   G +E    VL+ M +  +S  N++TY++LI G CK G   EA  +FE +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVS-RNVVTYTSLIKGYCKKGLMEEAEHVFE-L 321

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + + +++ D   Y VL+DG+CR G++  A ++ + M   G   N     +L+NG+CK G+
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA+++F  M ++ LKPD   Y TL++ +CRAG VDEAL+L  +M ++     ++T+NI
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L G  R G   + L + + +   G+  ++ S   +L    + G+  +A++L   +L RG
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501

Query: 445 FLPHYATSNELLVRLCK 461
            L    T N ++  LCK
Sbjct: 502 LLTDTITLNVMISGLCK 518



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 20/399 (5%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY ++++  A     E +  VLR M+      +   + +L+K +    L E  
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIES--------NQVDLAQNFLKYSNQHLRLKPN 201
             +F     + +EK  L A      +L++         + V +  N ++     + ++ N
Sbjct: 316 EHVFE----LLKEK-KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE-----IGVRTN 365

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           T I N LI  +CK G L  A ++   M    +  P+  TY+TL+DG C+ G   EA++L 
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLK-PDHHTYNTLVDGYCRAGYVDEALKLC 424

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M  K +++P  +TYN+L+ G+ R G       + + M   G N +  + +TL+    K
Sbjct: 425 DQMCQK-EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G   EA ++++ +    L  DTI    +I+  C+  +V+EA E+L  +    CK  + T
Sbjct: 484 LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT 543

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +  +  G  + G ++EA  + E +   GI+     Y  +++ + +   L K  +L+  + 
Sbjct: 544 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 603

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
            RG  P  AT   L+   C  GM + A    F ++E G 
Sbjct: 604 ARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 178/392 (45%), Gaps = 46/392 (11%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--HLRLKPNTCIFNILIKHHCKRGTLES 220
           KP     +T ++    +  VD A   LK  +Q     + P    +NIL+K + + G    
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEA---LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
              + K M K  ++  + I+ STL++ L K G F EA++L+E ++++  +L D +T NV+
Sbjct: 455 VLSLWKMMLKRGVN-ADEISCSTLLEALFKLGDFNEAMKLWENVLARG-LLTDTITLNVM 512

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I G C+  KV+ AK+I++ +    C P V  Y  L +G+ K G L+EA  V + M+   +
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P    Y TLI+   +   +++  +L+ E++ RG    + T+  ++ G C  G I++A  
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL-----MLCRGF---------- 445
              ++   GI LN      + N   +  ++++A  LL+      +L  G+          
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEAS 692

Query: 446 -----------------------LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FK 481
                                  +P+    N  +  LCKAG  EDA      L+    F 
Sbjct: 693 ATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI 752

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P+  ++ +L+        +  AF L DE+ +K
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALK 784



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 80/139 (57%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN I Y+  I GLCK G+  +A +LF +++S D+ +PD  TY +LI G    G +++A  
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M   G  PN+  Y  L+ G CK G +  A+ +  ++    + P+ I Y TLI+   
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836

Query: 356 RAGRVDEALELLKEMKERG 374
           ++G V EA+ L ++M E+G
Sbjct: 837 KSGNVAEAMRLKEKMIEKG 855



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 8/254 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    +  LI   C  G ++ A+    EM +  ++  N+   S + + L +  +  EA
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL-NVNICSKIANSLFRLDKIDEA 665

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN----PNVFNYT 313
             L +++V  D +LP   +    ++         + +KI E ++N+       PN   Y 
Sbjct: 666 CLLLQKIVDFDLLLPGYQSLKEFLEA--SATTCLKTQKIAESVENSTPKKLLVPNNIVYN 723

Query: 314 TLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             + G CK GKL++A+++F D + +    PD   YT LI+    AG +++A  L  EM  
Sbjct: 724 VAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMAL 783

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G   +IVT+N ++ GLC+ G ++ A  +L KL   GI  N  +Y  +++   + G + +
Sbjct: 784 KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 843

Query: 433 AIELLRLMLCRGFL 446
           A+ L   M+ +G +
Sbjct: 844 AMRLKEKMIEKGLV 857



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 134/264 (50%), Gaps = 2/264 (0%)

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G  + A+ +F+ M +  +I P  L+ N L+    R G+   A  + + M +   +P+VF 
Sbjct: 169 GLVKNALHVFDNMGNYGRI-PSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFT 227

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            + ++N +C+ G + +A     E ++ L L+ + + Y +LIN +   G V+    +L+ M
Sbjct: 228 CSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLM 287

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            ERG   ++VT+  ++ G C++G +EEA  + E L    +  ++  Y ++++  C+ G++
Sbjct: 288 SERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQI 347

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+ +   M+  G   +    N L+   CK+G   +A      + +   KP+  ++  L
Sbjct: 348 RDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407

Query: 491 VELICRGRKLLFAFELLDELVIKE 514
           V+  CR   +  A +L D++  KE
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKE 431


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 194/336 (57%), Gaps = 7/336 (2%)

Query: 177 IESNQVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           +ES  V  A    + + QH +R+  +TC    +++H  +    +  ++  KE+   +  Y
Sbjct: 77  LESGFVRDAVQCFRLTKQHKIRVPFDTC--RKVLEHLMEFRYFKLVWDFYKEV--LECGY 132

Query: 236 P-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           P +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N LI+G+ + G +D   
Sbjct: 133 PASLYFFNILMQRFCKEGEMRLAQSVFDA-ITKWGLRPSVVSFNTLINGYIKLGDLDEGF 191

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           ++   M  +G  P+V+ Y+ L+NG CKEGKL EA E+F+EM +  L P+ + +TTLI+  
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+  +VD A+E+ K+M  +G   D++T+N ++ GLC++G++++   +++++  +G+  +K
Sbjct: 252 CKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            SY  +++ SC++G+LE A+EL   M+             L+  LC+ G A DA   L  
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLRE 371

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           ++ +G KP++ ++ +++   C+ R    A +LL E+
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREM 407



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN LI  + K G L+  F +   M  S  + P++ TYS LI+GLCK G+  EA
Sbjct: 167 LRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASG-AQPDVYTYSILINGLCKEGKLDEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF EM+  + ++P+ +T+  LI G C+  KVD A +I + M + G +P++  Y TL+ 
Sbjct: 226 NELFNEMLD-NGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G+L++  ++ DEM    LKPD I YTTLI+  C+ G ++ ALEL  +M +   + 
Sbjct: 285 GLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++  LCREG+  +A  ML ++   G+  +  +Y +++N  C+K + + A +LL
Sbjct: 345 DDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLL 404

Query: 438 RLMLCRGFLPHYAT 451
           R M   G +P   T
Sbjct: 405 REMQRDGPVPGVVT 418



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 153/300 (51%), Gaps = 9/300 (3%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           + +    FE + E K +Q+S  +   +S L+    ++G  R+A++ F         +P  
Sbjct: 45  KDSASDVFEAILETKGTQIS--DFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFD 102

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
               VL        +    K + +F K     G   +++ +  LM  FCKEG+++ A+ V
Sbjct: 103 TCRKVLEHLM----EFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSV 158

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD +  + L+P  + + TLIN + + G +DE   L   M   G + D+ T++I++ GLC+
Sbjct: 159 FDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCK 218

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           EGK++EA  +  ++  +G+  N  ++  +++  C+  +++ A+E+ + ML +G  P   T
Sbjct: 219 EGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLIT 278

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+  LCK G  +     +  ++  G KP+  S+  L++  C+   L  A EL ++++
Sbjct: 279 YNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMI 338



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 83/166 (50%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           +  L+  FC+ G +  A  +   + + G +  +V+FN ++ G  + G ++E   +   + 
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G   +  +Y I++N  C++G+L++A EL   ML  G +P+  T   L+   CK    +
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
            A      ++  G  P+  ++  L+  +C+  +L    +L+DE+++
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIM 304


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 225/487 (46%), Gaps = 42/487 (8%)

Query: 65  AISLIKCEKEPQCALEIFN-TVSEQKG---FNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           A S   C   P  A+ +FN   S  +G    +  + TYA ++D   R  + E   A   Q
Sbjct: 77  APSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQ 136

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           +     + +  I  +L++ F      +  L++     P     P + + S  L  L +  
Sbjct: 137 LLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196

Query: 181 QVDLAQNFLKYSNQHLRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +   A + L+   +   +  PN   +N +I    K G +  A ++ KEM +  +  P+L+
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP-PDLV 255

Query: 240 TYSTLIDGLCK-----------------------------------NGRFREAIELFEEM 264
           TY++++  LCK                                    G+++EA+ +F+EM
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  ILPD +T ++L+   C+ GK+  A+ + + M   G NP+VF+Y  ++NG+  +G 
Sbjct: 316 -RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 374

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +  ++FD M    + PD   +  LI  +   G +D+A+ +  EM++ G K D+VT+  
Sbjct: 375 LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 434

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR GK+++A+    ++   G+  +K +Y  ++   C  G L KA EL+  ++  G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                   + ++  LCK G   DA       V +G  P++  +++L++  C   K+  A 
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 554

Query: 505 ELLDELV 511
            + D +V
Sbjct: 555 RVFDAMV 561



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 215/410 (52%), Gaps = 11/410 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+T++  KG N +  +Y  +L+  A       +  +   M  +        F  L+
Sbjct: 343 ARDVFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 401

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQ 194
           K ++NC + ++ + +F+++  H +   KP +    T +  L    ++D A + F +  +Q
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGV---KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            +   P+   +N LI+  C  G+L  A E++ E+  + M + +++ +S++I+ LCK GR 
Sbjct: 459 GV--APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM-HLDIVFFSSIINNLCKLGRV 515

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  +F+  V+   + PDA+ Y++L+DG+C  GK+++A ++ + M + G  PNV  Y T
Sbjct: 516 MDAQNIFDLTVNVG-LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 574

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G++ E   +F EM    +KP TI Y+ +I+   +AGR   A     EM E G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESG 634

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI T+NI+L GL +    +EA+ + ++L    + +N  +   +++   Q   +E+A 
Sbjct: 635 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 694

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +L   +     +P   T + ++  L K G+ E+A      +   G +P S
Sbjct: 695 DLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 744



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 188/405 (46%), Gaps = 76/405 (18%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY +++  L + +  +  +A LRQM  +    +   + NL+  +S+    +
Sbjct: 247 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 306

Query: 148 RVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNF-----LKYSNQHL---- 196
             + +F ++  H I    P +  +S  +  L +  ++  A++      +K  N  +    
Sbjct: 307 EAVRVFKEMRRHSIL---PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363

Query: 197 -------------------------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     + P+   FN+LIK +   G L+ A  +  EM+  
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  P+++TY T+I  LC+ G+  +A+E F +M+ +  + PD   YN LI GFC  G + 
Sbjct: 424 GVK-PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLL 481

Query: 292 RAKKIMEFMKNNG-----------------------------------CNPNVFNYTTLM 316
           +AK+++  + NNG                                    +P+   Y+ LM
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+C  GK+++A  VFD M +  ++P+ + Y TL+N +C+ GR+DE L L +EM +RG K
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 601

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
              + ++II+ GL + G+   A     ++   GI ++  +Y IVL
Sbjct: 602 PSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 172/396 (43%), Gaps = 42/396 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IFN + +  G   +  TY T++  L R  K +       QM  +     +  +  L+
Sbjct: 413 AMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 471

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQH 195
           + F  C+ H  +L+    I  I      L  +  S+ +N L +  +V  AQN    +  +
Sbjct: 472 QGF--CT-HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT-VN 527

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P+  ++++L+  +C  G +E A  V   M  + +  PN++ Y TL++G CK GR  
Sbjct: 528 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE-PNVVVYCTLVNGYCKIGRID 586

Query: 256 EAIELFEEMVSKD--------QILPDAL--------------------------TYNVLI 281
           E + LF EM+ +          I+ D L                          TYN+++
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G  +    D A  + + ++      N+    T+++G  +  +++EAK++F  +    L 
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 706

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  + Y+ +I    + G V+EA ++   M+  GC+ +    N ++  L ++ +I  A   
Sbjct: 707 PSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAY 766

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           L K+      L   +  ++++    KG   + I  L
Sbjct: 767 LSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF    S+ Q    + P + TY +L+D   R  + + A      +   G   N+   
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149

Query: 313 TTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             L+ GFC+  +  EA ++           PD   Y+ L+   C  G+  +A +LL+ M 
Sbjct: 150 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 372 ERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           E G  C  ++V +N ++ G  +EG + +A  + +++   GI  +  +Y  V++  C+   
Sbjct: 210 EGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 269

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           ++KA   LR M+ +  LP+  T N L+      G  ++A      +      P+  + ++
Sbjct: 270 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A ++ D + +K
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMK 353


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 188/361 (52%), Gaps = 10/361 (2%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH--ERVLEMFHK 155
           +  +L  + R KK+E V ++ ++M +   K++      L+  F  C LH  +    +F K
Sbjct: 43  FNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCF--CFLHHVDYGFSVFGK 100

Query: 156 IHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
              + R  KP +   +T ++ +    + +LA   LK     +   P+    N L++ +C 
Sbjct: 101 T--LKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL-VGCVPDVVTCNSLMRGYCS 157

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G ++   ++   M    +  P++ +YS  I+G CK  +  EA+ELF+EM S   ++P+A
Sbjct: 158 QGKIDKVRKIFHLMVSKGLK-PDVYSYSIFINGYCKVEKIDEAMELFDEM-SHRGVVPNA 215

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +TYN LI   C+  +   A+ +   M   G +P++  Y+TL++GFCK+G L E   +F E
Sbjct: 216 VTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQE 275

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M+  L+KPD + YT +IN  CR+ +V +A E+L  +   G K D+ T+  ++ GLCREG 
Sbjct: 276 MQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGS 335

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           I EAL +  K+  DG      SY ++L    Q  +    ++L+  M  RGF     T   
Sbjct: 336 IIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTF 395

Query: 455 L 455
           L
Sbjct: 396 L 396



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 161/295 (54%), Gaps = 2/295 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K N C  +ILI   C    ++  F V  +  K     P+++ ++TLIDG+C+ G+   A
Sbjct: 71  IKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFK-PDVVIFTTLIDGVCRIGKTELA 129

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM      +PD +T N L+ G+C  GK+D+ +KI   M + G  P+V++Y+  +N
Sbjct: 130 AGLLKEM-GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFIN 188

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK  K+ EA E+FDEM +  + P+ + Y TLI   C+A R  +A  L ++M   G   
Sbjct: 189 GYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSP 248

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI+ ++ +L G C++G ++E L + +++    +  +   Y I++N  C+  +++ A E+L
Sbjct: 249 DILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVL 308

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             ++  G  P   T   L+  LC+ G   +A      + E G  P S S+ +L++
Sbjct: 309 SRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQ 363



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 159/312 (50%), Gaps = 2/312 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P    FN L+    +    E+   + KEM+   + Y N+ T S LI+  C         
Sbjct: 37  QPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKY-NVCTLSILINCFCFLHHVDYGF 95

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +F + + K    PD + +  LIDG CR GK + A  +++ M   GC P+V    +LM G
Sbjct: 96  SVFGKTL-KRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRG 154

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +C +GK+ + +++F  M +  LKPD   Y+  IN +C+  ++DEA+EL  EM  RG   +
Sbjct: 155 YCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPN 214

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            VT+N ++  LC+  +  +A  +  K+   G+  +  +Y  +L+  C++G L++ + L +
Sbjct: 215 AVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQ 274

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  R   P       ++  +C++   +DA   L  L+  G KP+  ++  LV+ +CR  
Sbjct: 275 EMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREG 334

Query: 499 KLLFAFELLDEL 510
            ++ A  L  ++
Sbjct: 335 SIIEALRLFRKM 346



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 160/336 (47%), Gaps = 39/336 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++GF  +   + T++D + R  K E    +L++M    C        +LM+ + +    +
Sbjct: 103 KRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKID 162

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +V ++FH                    L++                    LKP+   ++I
Sbjct: 163 KVRKIFH--------------------LMVSKG-----------------LKPDVYSYSI 185

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            I  +CK   ++ A E+  EM    +  PN +TY+TLI  LC+  R R+A  LF +M + 
Sbjct: 186 FINGYCKVEKIDEAMELFDEMSHRGV-VPNAVTYNTLIKALCQALRPRDAQVLFRKMCAC 244

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD L Y+ L+DGFC+ G +D    + + M+     P++  YT ++NG C+  K+++
Sbjct: 245 G-LSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKD 303

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AKEV   +    LKPD   YT L++  CR G + EAL L ++M+E GC     ++N++L 
Sbjct: 304 AKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQ 363

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           G  +       + ++ ++   G Y +  +   + +F
Sbjct: 364 GCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKDF 399



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 2/298 (0%)

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G L+ A      M       P +I ++ L+  + +  ++   + LF+EM  +  I  +  
Sbjct: 19  GNLDDALASFNRMLDRN-PQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRG-IKYNVC 76

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           T ++LI+ FC    VD    +       G  P+V  +TTL++G C+ GK + A  +  EM
Sbjct: 77  TLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 PD +   +L+  +C  G++D+  ++   M  +G K D+ +++I + G C+  KI
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKI 196

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA+ + +++ + G+  N  +Y  ++   CQ      A  L R M   G  P     + L
Sbjct: 197 DEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTL 256

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L   CK G  ++  +    +     KP+   + +++  +CR RK+  A E+L  L+++
Sbjct: 257 LDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 177/312 (56%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  LI+  C  G     F ++ EM +  +   ++  ++ LIDGLCKNG   EA E
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDV-SVYVFTVLIDGLCKNGMLVEARE 276

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+EMV++    P+ +T   L+ G+C  G VD A+++ + +   G   +V+ Y   ++G+
Sbjct: 277 MFDEMVNRGY-EPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGY 335

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G++++A  VFDEM    + P+ + Y +LI+C C+AG V  A E++K M   G   DI
Sbjct: 336 CKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDI 395

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT  I+L GLC+  ++++A+ +  +L   G+  +  SY I+++  C    + +A+ LLR 
Sbjct: 396 VTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRD 455

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +  +PH  T + L+  LC++G   +A   L  +   G  P++ ++++L++ + + + 
Sbjct: 456 MHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQH 515

Query: 500 LLFAFELLDELV 511
           L  A  L ++++
Sbjct: 516 LDEAVFLFNQMI 527



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 170/320 (53%), Gaps = 8/320 (2%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-------PNLITYSTLIDGLCKNGR 253
           N   + ILI   C+ G +  A  +L+ ++K +           N++ YS +ID LC+NG 
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             E  E + EM+  + + P+  TY  LI G C  GK      +++ M   G + +V+ +T
Sbjct: 201 VDEGFEFYNEMMG-NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++G CK G L EA+E+FDEM N   +P+ +  T L+  +C  G VD A EL   + E 
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K D+ T+N+ + G C+ G++ +A+ + +++  +G+  N  +Y  +++  C+ GE+  A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            E+++ M   G  P   T   LL  LCK+   + A +    LVE G  P+  S+ +L+  
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 494 ICRGRKLLFAFELLDELVIK 513
            C  R++  A  LL ++ +K
Sbjct: 440 CCTSRRMGEAMNLLRDMHLK 459



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 182/371 (49%), Gaps = 6/371 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY +++  L    KF     ++ +M          +F  L+       +     EMF
Sbjct: 219 NEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMF 278

Query: 154 HKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
            ++  + R  +P++   +  +        VD+A+       +    K +   +N+ I  +
Sbjct: 279 DEM--VNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGE-WGFKRDVWTYNVFIHGY 335

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G +  A  V  EM +  +  PN++TY++LID LCK G    A E+ + M  +  + P
Sbjct: 336 CKVGRVRDAVRVFDEMCREGV-VPNIVTYNSLIDCLCKAGEVSGAWEIVKTM-HRSGLTP 393

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D +T  +L+DG C+  ++D+A  +   +  +G  P+V++YT L++G C   ++ EA  + 
Sbjct: 394 DIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLL 453

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            +M    L P  + Y+ LI+  CR+GR+  A  LL EM  +G   D +T++I+L  L ++
Sbjct: 454 RDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKK 513

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
             ++EA+ +  ++   G+  +   Y I+++  C+   +++AI L R M  +  +P   T 
Sbjct: 514 QHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTY 573

Query: 453 NELLVRLCKAG 463
             L   + K+G
Sbjct: 574 TILFNAVFKSG 584



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 158/316 (50%), Gaps = 2/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  +  +F +LI   CK G L  A E+  EM       PN++T + L+ G C  G    A
Sbjct: 251 LDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYE-PNIVTCTALMGGYCLKGNVDMA 309

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+  + +     D  TYNV I G+C+ G+V  A ++ + M   G  PN+  Y +L++
Sbjct: 310 RELFDA-IGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLID 368

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK G++  A E+   M    L PD +    L++  C++ R+D+A+ L  ++ E G   
Sbjct: 369 CLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTP 428

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ ++ I++ G C   ++ EA+ +L  +    +  +  +Y  +++  C+ G +  A  LL
Sbjct: 429 DVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL 488

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G LP   T + LL  L K    ++A      +++ G +P+   + ++++  C+ 
Sbjct: 489 NEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKS 548

Query: 498 RKLLFAFELLDELVIK 513
            ++  A  L  E+ +K
Sbjct: 549 ERIDEAINLFREMHMK 564



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 8/285 (2%)

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           S+ +L  ++  +  L K  +   AI LF +    + I P  +T  ++I  F   G V  +
Sbjct: 32  SHSSLAHFNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLGHVSFS 91

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
             I   +   G   +     T++ G C  G + +A E  DE+ N     + + Y  LIN 
Sbjct: 92  FSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILING 151

Query: 354 FCRAGRVDEALELLKEMKERG--------CKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            C  GRV+EA+ LL+ +++           K ++V ++I++  LCR G ++E      ++
Sbjct: 152 LCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEM 211

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
             +G+  N+ +Y  ++   C  G+  +   L+  M+ RG          L+  LCK GM 
Sbjct: 212 MGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGML 271

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +A      +V  G++P   +   L+   C    +  A EL D +
Sbjct: 272 VEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 14/170 (8%)

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
           CF   G V  +  +  ++ +RG   D V  N +L GLC  G + +AL   +++  +G  L
Sbjct: 81  CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLM-----------LCRGFLPHYATSNELLVRLCK 461
           N+ SY I++N  C+ G + +A+ LLR++             +G +  Y+   +    LC+
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDC---LCR 197

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G  ++       ++  G  P   ++  L+  +C   K L  F L+DE++
Sbjct: 198 NGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI 247



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 17/266 (6%)

Query: 67  SLIKC---EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTY 123
           SLI C     E   A EI  T+  + G   +  T   +LD L + K+ +    +  Q+  
Sbjct: 365 SLIDCLCKAGEVSGAWEIVKTM-HRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLV- 422

Query: 124 ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQ 181
           E+    +     ++ H   C    R+ E  + +  +  +   P +   S  ++ L  S +
Sbjct: 423 ESGLTPDVWSYTILIH--GCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480

Query: 182 VDLAQNFLKYSNQHLRLK-PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           +  A   L  +  H++   P+T  ++IL+    K+  L+ A  +  +M K  +  P+++ 
Sbjct: 481 ISNAWRLL--NEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLE-PDVMC 537

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ +IDG CK+ R  EAI LF EM  K+ ++PD +TY +L +   + G      K +  +
Sbjct: 538 YTIMIDGYCKSERIDEAINLFREMHMKN-LVPDIVTYTILFNAVFKSGSNSYEWKFVNVI 596

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           ++    P V  Y   +   CK   L 
Sbjct: 597 RDINPPPRVLKY---LAALCKSEHLD 619


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 165/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L   F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A  LF+EM+ K  ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANVLFDEMLDKG-LVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G ++ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLNE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A  +FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 147/278 (52%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLR-PSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A  + + M + G  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + N   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEENLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G ++E   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  ++  G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 228/458 (49%), Gaps = 22/458 (4%)

Query: 65  AISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
           A+S    E +P  AL+IF  +   K    N  T  T+L  L RY    ++ +  R++  +
Sbjct: 137 ALSAYLHEGKPHVALQIFQKMIRLK-LKPNLLTCNTLLIGLVRYPSSFSISSA-REVFDD 194

Query: 125 TCKFHEGIFLN------LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
             K   G+ LN      L+  +      E  L M  ++    +  P     +T L  + +
Sbjct: 195 MVKI--GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252

Query: 179 SNQV-DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
             ++ DL +  L      L   PN   +N L+  +CK G+L+ AF++++ MK++ +  P+
Sbjct: 253 KGRLSDLKELLLDMKKNGLV--PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV-LPD 309

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           L TY+ LI+GLC  G  RE +EL + M S  ++ PD +TYN LIDG    G    A+K+M
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSL-KLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGK----LQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           E M+N+G   N   +   +   CKE K     ++ KE+ D M  F   PD + Y TLI  
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD-MHGF--SPDIVTYHTLIKA 425

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           + + G +  ALE+++EM ++G K + +T N IL  LC+E K++EA  +L      G  ++
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
           + +Y  ++    ++ ++EKA+E+   M      P  +T N L+  LC  G  E A     
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L E G  P+  ++  ++   C+  ++  AFE  +E +
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 167/346 (48%), Gaps = 37/346 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+ C +NILI   C  G++    E++  MK  ++  P+++TY+TLIDG  + G   EA +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQ-PDVVTYNTLIDGCFELGLSLEARK 366

Query: 260 LFEEM----VSKDQIL-------------------------------PDALTYNVLIDGF 284
           L E+M    V  +Q+                                PD +TY+ LI  +
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
            + G +  A ++M  M   G   N     T+++  CKE KL EA  + +         D 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           + Y TLI  F R  +V++ALE+  EMK+      + TFN ++GGLC  GK E A+   ++
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           L   G+  + +++  ++   C++G +EKA E     +   F P   T N LL  LCK GM
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            E A      L+E   + ++ ++  ++   C+ +KL  A++LL E+
Sbjct: 607 TEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 173/360 (48%), Gaps = 38/360 (10%)

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS------------ 234
           N L + N HL   P+  +F+I +  +   G    A ++ ++M + ++             
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175

Query: 235 ---YP----------------------NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              YP                      N+ T++ L++G C  G+  +A+ + E MVS+ +
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + PD +TYN ++    + G++   K+++  MK NG  PN   Y  L+ G+CK G L+EA 
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++ + MK   + PD   Y  LIN  C AG + E LEL+  MK    + D+VT+N ++ G 
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR-LMLCRGFLPH 448
              G   EA  ++E++  DG+  N+ ++ I L + C++ + E     ++ L+   GF P 
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T + L+    K G    A   +  + + G K  + +   +++ +C+ RKL  A  LL+
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 169/323 (52%), Gaps = 14/323 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCS 144
           E  G   N  T+   L  L + +K EAV   ++++  +   F   I  +  L+K +    
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV-DMHGFSPDIVTYHTLIKAYLKVG 430

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
                LEM  ++     +  ++  ++T L+ L +  ++D A N L  +++      +   
Sbjct: 431 DLSGALEMMREMGQKGIKMNTI-TLNTILDALCKERKLDEAHNLLNSAHKR-GFIVDEVT 488

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI    +   +E A E+  EMKK +++ P + T+++LI GLC +G+   A+E F+E+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKIT-PTVSTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            ++  +LPD  T+N +I G+C+ G+V++A +       +   P+ +    L+NG CKEG 
Sbjct: 548 -AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 325 LQEAKEVFDEMKNFLLKP---DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            ++A   F    N L++    DT+ Y T+I+ FC+  ++ EA +LL EM+E+G + D  T
Sbjct: 607 TEKALNFF----NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662

Query: 382 FNIILGGLCREGKIEEALGMLEK 404
           +N  +  L  +GK+ E   +L+K
Sbjct: 663 YNSFISLLMEDGKLSETDELLKK 685



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 36/273 (13%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   ++ LIK + K G L  A E+++EM +  +   N IT +T++D LCK  +  EA  
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM-NTITLNTILDALCKERKLDEAHN 472

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L      K   + D +TY  LI GF R  KV++A ++ + MK     P V  + +L+ G 
Sbjct: 473 LLNS-AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE---------- 369
           C  GK + A E FDE+    L PD   + ++I  +C+ GRV++A E   E          
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591

Query: 370 --------------MKERGC----------KADIVTFNIILGGLCREGKIEEALGMLEKL 405
                         M E+            + D VT+N ++   C++ K++EA  +L ++
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
              G+  ++ +Y   ++   + G+L +  ELL+
Sbjct: 652 EEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 25/150 (16%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP     +  LN L +    + A NF     +   +  +T  +N +I   CK   L+ A+
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAY 645

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV----------------- 265
           ++L EM++  +  P+  TY++ I  L ++G+  E  EL ++                   
Sbjct: 646 DLLSEMEEKGLE-PDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKN 704

Query: 266 -----SKDQILPDALTYNVLIDGFCRGGKV 290
                SK+++  +A+ Y+ +ID  C  G++
Sbjct: 705 PATSESKEELNTEAIAYSDVIDELCSRGRL 734


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 179/314 (57%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L  N   + +LI    K G  +  FE+ ++M++  + +PNL TY+ +++  CK+GR ++A
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGV-FPNLYTYNCVMNQHCKDGRTKDA 287

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF+EM  +  +  + +TYN LI G CR  K + A K+M+ MK++G NPN+  Y TL++
Sbjct: 288 FKLFDEMRERG-VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLID 346

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC  GKL +A  +  ++K+  L P  + Y  L++ FC+ G    A +++KEM+ERG K 
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
             +T+ I++    R   +E+A+ +   +   G+  +  +Y ++++  C KG++ +A  L 
Sbjct: 407 SKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           +LM+ +   P+    N +++  CK G +  A      + E    P   S+  ++E++C+ 
Sbjct: 467 KLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKE 526

Query: 498 RKLLFAFELLDELV 511
           RK   A  L+++++
Sbjct: 527 RKSKEAEGLVEKMI 540



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 169/317 (53%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN  I+  LI   CKRG +E A ++  EM K  +   N  TY+ LI GL KNG  ++ 
Sbjct: 194 FSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGL-VANEWTYTVLIHGLFKNGIKKQG 252

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E++E+M  +D + P+  TYN +++  C+ G+   A K+ + M+  G + N+  Y TL+ 
Sbjct: 253 FEMYEKM-QEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIG 311

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+E K  EA +V D+MK+  + P+ I Y TLI+ FC  G++ +AL L +++K RG   
Sbjct: 312 GLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT+NI++ G C++G    A  +++++   GI  +K +Y I+++   +   +EKAI+L 
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLR 431

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P   T + L+   C  G   +A+     +V    +P    +  +V   C+ 
Sbjct: 432 SPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKE 491

Query: 498 RKLLFAFELLDELVIKE 514
                A  L  E+  KE
Sbjct: 492 GSSYRALRLFREMEEKE 508



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 173/299 (57%), Gaps = 6/299 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N ++  HCK G  + AF++  EM++  +S  N++TY+TLI GLC+  +  EA +
Sbjct: 266 PNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVS-CNIVTYNTLIGGLCREMKANEANK 324

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + ++M S D I P+ +TYN LIDGFC  GK+ +A  +   +K+ G +P++  Y  L++GF
Sbjct: 325 VMDQMKS-DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+G    A +V  EM+   +KP  I YT LI+ F R   +++A++L   M+E G   D+
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDV 443

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+++++ G C +G++ EA  + + +    +  NK  Y  ++   C++G   +A+ L R 
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           M  +   P+ A+   ++  LCK   +++A   +  +++ G  P SDS   ++ LI R +
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP-SDS---ILNLISRAK 558



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 171/337 (50%), Gaps = 10/337 (2%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMK- 229
           +N  ++S  +D +   + Y N+ +     P +  FN L+       +    +    E K 
Sbjct: 101 INAYVQSQSLDSS---ISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKI 157

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           K  +   ++ ++  +I G C+ G   ++ +L  E+  +    P+ + Y  LIDG C+ G+
Sbjct: 158 KVDL---DVYSFGIVIKGCCEAGEIEKSFDLLVEL-REFGFSPNVVIYTTLIDGCCKRGE 213

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +++AK +   M   G   N + YT L++G  K G  ++  E++++M+   + P+   Y  
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNC 273

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           ++N  C+ GR  +A +L  EM+ERG   +IVT+N ++GGLCRE K  EA  +++++  DG
Sbjct: 274 VMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDG 333

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I  N  +Y  +++  C  G+L KA+ L R +  RG  P   T N L+   CK G    A 
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAG 393

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
             +  + E G KP   ++ +L++   R   +  A +L
Sbjct: 394 KVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL 430



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 145/299 (48%), Gaps = 6/299 (2%)

Query: 216 GTLESAF----EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
           G ++S F     +L  + +S+ S      Y  +I+   ++     +I  F EMV K   +
Sbjct: 68  GKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKG-FV 126

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P +  +N L+         ++  +     K    + +V+++  ++ G C+ G+++++ ++
Sbjct: 127 PGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK-VDLDVYSFGIVIKGCCEAGEIEKSFDL 185

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             E++ F   P+ + YTTLI+  C+ G +++A +L  EM + G  A+  T+ +++ GL +
Sbjct: 186 LVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFK 245

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G  ++   M EK+  DG++ N  +Y  V+N  C+ G  + A +L   M  RG   +  T
Sbjct: 246 NGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVT 305

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            N L+  LC+   A +A   +  +   G  P   ++  L++  C   KL  A  L  +L
Sbjct: 306 YNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 240/519 (46%), Gaps = 80/519 (15%)

Query: 72  EKEPQCALEIFNTVSEQKGFNH--NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           EK  + ALE+ + +++    +H  N  TY T++D L + +  +    V + M  +  + +
Sbjct: 177 EKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPN 236

Query: 130 EGIFLNLMKHFSNCSLHERVLEMF-----HKIHP-------------------------- 158
              +  L+  + +    + V++M      H + P                          
Sbjct: 237 NHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFD 296

Query: 159 -ITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
            + R+  KP++      L+       +    +FL     +  + P+  IFNI+   + K+
Sbjct: 297 SVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGN-GVSPDHHIFNIMFCAYAKK 355

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK-------- 267
             ++ A  +  +M++ ++S PN++TY  LID LCK GR  +A+  F +M+ +        
Sbjct: 356 AMIDEAMHIFDKMRQQRLS-PNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFV 414

Query: 268 -------------------------DQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                                    DQ I  D + +N L+   CR G+V  A+++++ M 
Sbjct: 415 FSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLML 474

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             G  P+V +Y TL++G C  G++ EA ++ D + +  LKPD + Y TL++ +C+A R+D
Sbjct: 475 RVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRID 534

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           +A  L +EM  +G   D+VT+N IL GL + G+  EA  +   +      +N  +Y I++
Sbjct: 535 DAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIII 594

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N  C+   +++A ++   +  +       T+N ++  L K G  EDA      +   G  
Sbjct: 595 NGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLV 654

Query: 482 PESDSWALLVE-LICRGRKLLFAFELLDEL--VIKESGT 517
           P+ +++ L+ E LI  G     + E LDEL   ++E+GT
Sbjct: 655 PDVETYCLIAENLIKEG-----SLEELDELFSAMEENGT 688



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 210/427 (49%), Gaps = 12/427 (2%)

Query: 93  HNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLE 151
           ++   ++ +L  L   K+  EA D +LR+M    C      +  L+K F N    E  LE
Sbjct: 126 NDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALE 185

Query: 152 MFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL---RLKPNTCIFN 206
           +   +         P++   +T ++ L ++  VD A+       QH+    ++PN   + 
Sbjct: 186 LLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVF----QHMIDKGVRPNNHTYT 241

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +   G  +   ++L+EM    +  P+   Y+ L+D LCKNGR  EA  +F+ ++ 
Sbjct: 242 CLIHGYLSIGKWKEVVQMLQEMSTHGLQ-PDCYIYAVLLDYLCKNGRCTEARNIFDSVIR 300

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  I P+   Y +L+ G+   G +      ++ M  NG +P+   +  +   + K+  + 
Sbjct: 301 KG-IKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMID 359

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA  +FD+M+   L P+ + Y  LI+  C+ GRVD+A+    +M + G   DI  F+ ++
Sbjct: 360 EAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLV 419

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC   K E+A  +  ++   GI L+   +  ++   C++G + +A  L+ LML  G  
Sbjct: 420 YGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVR 479

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   + N L+   C  G  ++AA  L  +V +G KP+  ++  L+   C+ R++  A+ L
Sbjct: 480 PDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSL 539

Query: 507 LDELVIK 513
             E+++K
Sbjct: 540 FREMLMK 546



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 199/422 (47%), Gaps = 44/422 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR--QMTYETCKFHEGIFLN 135
           A+ IF+ + +Q+  + N  TY  ++D L +  + +  DAVL+  QM  E       +F +
Sbjct: 361 AMHIFDKMRQQR-LSPNIVTYGALIDALCKLGRVD--DAVLKFNQMIDEGMTPDIFVFSS 417

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+         E+  E+F ++                                    +Q 
Sbjct: 418 LVYGLCTVDKWEKAEELFFEV-----------------------------------LDQG 442

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +RL  +T  FN L+ + C+ G +  A  ++  M +  +  P++I+Y+TL+DG C  GR  
Sbjct: 443 IRL--DTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVR-PDVISYNTLVDGHCLTGRID 499

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA +L + +VS   + PD +TYN L+ G+C+  ++D A  +   M   G  P+V  Y T+
Sbjct: 500 EAAKLLDVIVSIG-LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTI 558

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G  + G+  EAKE++  M N   + +   Y  +IN  C+   VDEA ++   +  +  
Sbjct: 559 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDL 618

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + DI T NI++G L + G+ E+A+ +   +   G+  +  +Y ++     ++G LE+  E
Sbjct: 619 QLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDE 678

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   M   G  P+    N L+  L   G    A   L  L E  F  E+ + ++L+ +  
Sbjct: 679 LFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYS 738

Query: 496 RG 497
           RG
Sbjct: 739 RG 740



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 151/307 (49%), Gaps = 4/307 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           +++ P++  + ILI   C+ G L+  F     + K+     + + +S L+ GLC   R  
Sbjct: 86  IKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVD 145

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG---CNPNVFNY 312
           EA ++    + +    PD  +Y++L+ GFC   + + A +++  M ++G     PNV  Y
Sbjct: 146 EATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTY 205

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TT+++G CK   +  AK VF  M +  ++P+   YT LI+ +   G+  E +++L+EM  
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMST 265

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + D   + ++L  LC+ G+  EA  + + +   GI  N   Y I+L+    +G L +
Sbjct: 266 HGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSE 325

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
               L LM+  G  P +   N +     K  M ++A      + +    P   ++  L++
Sbjct: 326 MHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALID 385

Query: 493 LICR-GR 498
            +C+ GR
Sbjct: 386 ALCKLGR 392


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 231/494 (46%), Gaps = 54/494 (10%)

Query: 57   SRFISHG---AAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
            S FI +G    A+ L++  K+ +C   +               TY T++D L +  + + 
Sbjct: 536  SAFIHNGHVDEAVKLLEVMKKHECIPTV--------------VTYTTLVDGLGKAGRLDE 581

Query: 114  VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF-------------------- 153
              ++LR+M  + C+     + +LM  F      E  L +F                    
Sbjct: 582  AVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVIN 641

Query: 154  ---------HKIHPITREK-----PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
                       +    R K     P L    T L+ L++  ++D A        Q   L 
Sbjct: 642  CLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN-ELQESSLV 700

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+T ++NI++    K   ++ A +++  MK +Q   P+L TY++L+DGL K+GR  EA  
Sbjct: 701  PDTFVYNIMVNGLVKSNRVDEACKLVDSMK-NQNILPDLFTYTSLLDGLGKSGRLEEAFN 759

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            +F +M  +    PD + Y  L+D   +GGK+  A  I   M    C P+V  Y++L++  
Sbjct: 760  MFTKMTEEGH-EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
             KEG+++EA   F+   +    P+   Y++LI+ F + G VD ALEL +EM+ R C  +I
Sbjct: 819  GKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNI 878

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            VT+N +L GL + G++  A  +LE++   G   +  +Y I+++   + G +++A    + 
Sbjct: 879  VTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKR 938

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            M  +G +P   T   L+  L K     +A      + E G+ P   ++ +L++++ R  K
Sbjct: 939  MKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGK 998

Query: 500  LLFAFELLDELVIK 513
            +  A  +  E+ +K
Sbjct: 999  VHEAAMIFHEMKVK 1012



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 225/450 (50%), Gaps = 24/450 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           L K  ++P+ A ++F+ + EQ G   +  TY T++D L +  + + V A++++M  +  +
Sbjct: 437 LGKAGRQPE-AWQLFHDLKEQ-GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGE 494

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK-------AISTCLNLLIESN 180
                   ++   SN   HE  +E   +    T E PSL          +T ++  I + 
Sbjct: 495 C-------IISRDSNAG-HEGTIEGADR----TVEYPSLGFKSLGEITYNTLMSAFIHNG 542

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
            VD A   L+   +H    P    +  L+    K G L+ A  +L+EM+K Q   P+++T
Sbjct: 543 HVDEAVKLLEVMKKH-ECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK-QGCEPSVVT 600

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           YS+L+    K  +  E++ LF+EMV K  +  D  TY+++I+  C+   VD+A  +   M
Sbjct: 601 YSSLMASFYKRDQEEESLSLFDEMVRKGCV-ADVSTYSLVINCLCKSDDVDQALDVFGRM 659

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           K  G  P + NY TL++   K+ K+  A ++F+E++   L PDT  Y  ++N   ++ RV
Sbjct: 660 KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRV 719

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEA +L+  MK +    D+ T+  +L GL + G++EEA  M  K+  +G   +  +Y  +
Sbjct: 720 DEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSL 779

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++   + G+L  A+ + R M  +  +P   T + L+  L K G  E+A       +  G 
Sbjct: 780 MDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC 839

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDEL 510
            P    ++ L++   +   +  A EL +E+
Sbjct: 840 TPNVGVYSSLIDSFGKKGMVDRALELFEEM 869



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 254/589 (43%), Gaps = 82/589 (13%)

Query: 5   RFSLRKCCRFSSFSTSSSSL--PWISPLEVI------KANTPKADPPVETSDTCVDARK- 55
           R  L   CR+ +    S  L  P IS LE +      K    K +  +       +  K 
Sbjct: 80  RIQLASGCRYYTAGILSPRLDVPEISNLEAVERSGGDKFKLKKINGVIRRRKWDAEMGKQ 139

Query: 56  --RSRF-ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE 112
             R +F ++ G    ++  +K+   A   F    +Q G++H   TY  ++ +LA  ++ +
Sbjct: 140 LERLKFKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETD 199

Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
           AV  +L  M  E  +    +  +L++ F + +     LE+F+++       PS    +  
Sbjct: 200 AVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGC-NPSTNMYNFV 258

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L LL++      A        Q  R++P+   F I +    + G L+ A E ++EM KS 
Sbjct: 259 LELLVKGGFYHSAVIVFGKLGQ-FRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSG 317

Query: 233 MS----------------------------------YPNLITYSTLIDGLCKNGRFREAI 258
           +                                    PN++TY+TL++GL K GR  EA 
Sbjct: 318 IDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEAC 377

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+F EM  ++   PDA+ YN LIDG  + G+ D A  + + MK+ G  PN+  Y  +++ 
Sbjct: 378 EVFVEM-KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISV 436

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
             K G+  EA ++F ++K     PD   Y TLI+   + G++D+ L ++KEM E+G +  
Sbjct: 437 LGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECI 496

Query: 379 I-------------------------------VTFNIILGGLCREGKIEEALGMLEKLWY 407
           I                               +T+N ++      G ++EA+ +LE +  
Sbjct: 497 ISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK 556

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
                   +Y  +++   + G L++A+ LLR M  +G  P   T + L+    K    E+
Sbjct: 557 HECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEE 616

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           +      +V  G   +  +++L++  +C+   +  A ++   +  KE G
Sbjct: 617 SLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM--KEEG 663



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 231/521 (44%), Gaps = 55/521 (10%)

Query: 16  SFSTSSSSLPWISPL-EVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKE 74
           SF+ S    P   P+ E+IK+     DP V T    +DA  +S  I              
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGI---DPGVHTFTVLIDALVKSGNIDE------------ 340

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
              A + FN +   +  + N  TY T+++ LA+  + E    V  +M    C      + 
Sbjct: 341 ---ACKFFNGMKNLR-CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYN 396

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSN 193
            L+         +    +F ++       P+L+  +  +++L ++  Q +  Q F     
Sbjct: 397 TLIDGLGKAGEADMACGLFKEMKD-RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKE 455

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-----------------------KK 230
           Q     P+   +N LI    K G ++    ++KEM                         
Sbjct: 456 QGA--VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513

Query: 231 SQMSYPNL-------ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
             + YP+L       ITY+TL+     NG   EA++L E M  K + +P  +TY  L+DG
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVM-KKHECIPTVVTYTTLVDG 572

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
             + G++D A  ++  M+  GC P+V  Y++LM  F K  + +E+  +FDEM       D
Sbjct: 573 LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVAD 632

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y+ +INC C++  VD+AL++   MKE G +  +  +  +L  L ++ KI+ AL +  
Sbjct: 633 VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           +L    +  +   Y I++N   +   +++A +L+  M  +  LP   T   LL  L K+G
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             E+A      + E G +P+  ++  L++++ +G KL  A 
Sbjct: 753 RLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHAL 793


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 183/343 (53%), Gaps = 3/343 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P  K  +  +  L+   ++  AQN      Q   ++     FN +I   C+ G L+ A  
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFD-EMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 172

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + + M ++ ++ P++ TY  LI GLC+ GR  +A  +FE+M  +  + P+A+ + +LID 
Sbjct: 173 LHRRMSEAGVT-PDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG-MKPNAVVFTILIDA 230

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G  +   ++   M+  G  P+   Y  ++NG C+   L+ A  +  EM++  L+PD
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ YTTLI+ +C+   +D A+E+ + M   G   D VT+  ++ GL + G+  +A  +L 
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  +  +Y +V++  C+KG+++  + LL+ M  +G  P   T N ++   CK G
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
             ++A + L  ++ +G  P+  ++ +L++  C+  K+    EL
Sbjct: 411 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 453



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 154/275 (56%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    ++ L+  L + G    A  +F+EM S+  +    +++N +I G CR G +D A+ 
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG-VRRTVVSFNTMISGMCRAGDLDGAET 172

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M   G  P+V+ Y  L+ G C+ G++++A+ VF++M    +KP+ + +T LI+  C
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G  +  LEL +EM+ERG + D VT+N I+ GLCR   ++ A G++ ++   G+  +  
Sbjct: 233 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++ EL+ A+E+ + M+  G      T   L+  L KAG + DA   L  +
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E G +P++ ++ ++++  CR   +     LL E+
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM 387



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 118/219 (53%)

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           + G  P    +  LM    + G+L  A+ VFDEM++  ++   + + T+I+  CRAG +D
Sbjct: 109 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 168

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  L + M E G   D+ T+  ++ GLCR G+IE+A G+ EK+   G+  N   + I++
Sbjct: 169 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 228

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+KG+ E  +EL R M  RG  P   T N ++  LC+A   + A+  +  +   G +
Sbjct: 229 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 288

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
           P++ ++  L++  C+  +L  A E+   +V +  G  +V
Sbjct: 289 PDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEV 327



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 63/135 (46%)

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           EA     ++ + G   +   FN+++  L R G++  A  + +++   G+     S+  ++
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G+L+ A  L R M   G  P   T   L+  LC+ G  EDA      +   G K
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 482 PESDSWALLVELICR 496
           P +  + +L++  C+
Sbjct: 219 PNAVVFTILIDAHCK 233


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 219/469 (46%), Gaps = 55/469 (11%)

Query: 42  PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
           P + T +T +D+R +               E E   A+E+ + V    G + N+ +Y  +
Sbjct: 205 PTIVTFNTMMDSRCK---------------EGEVGRAVEVLD-VMRMFGCDPNDVSYNVL 248

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           ++ L+   +F+    ++ QM+    K     +  L++ F          EMF + + + R
Sbjct: 249 VNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKK-------EMFEEANDLRR 301

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           E     A+                              P    +N ++   C+ G +  A
Sbjct: 302 EMLGRGAL------------------------------PTVVTYNTIMYSLCRLGRVSDA 331

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
              L  M    +  P+L++Y+TLI G  + G F EA+ LF E+ SK+ ++P  +TYN LI
Sbjct: 332 RRYLDVMVNEDL-MPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN-LVPSVVTYNTLI 389

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG CR G +D AK + + M  +G  P+V  +T L+ GFC+ G L  AKE+FDEM +  LK
Sbjct: 390 DGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLK 449

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD I YTT I    + G   +A  + +EMK  G   D++T+N+++ GLC+ G  ++A  +
Sbjct: 450 PDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANEL 509

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           ++K+  +GI  +  +Y  +++     G L KA E+   ML +G  P   T   L+     
Sbjct: 510 VQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAV 569

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  + A      + + G  P   ++  L+  +C+   +  A+ L  E+
Sbjct: 570 RGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM 618



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 213/461 (46%), Gaps = 35/461 (7%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLAR-------YKKFEA-----VDA-VLRQM 121
           P  AL  F  V +Q  F+ +   +  ILD LA+       Y   E      VD  VL  +
Sbjct: 65  PLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVL 124

Query: 122 TYETCKFHEGIFLNLM----KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
               C  +  + + L+    + F+   + E+ L +F+K+       P ++  +  L LL 
Sbjct: 125 VGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVN-NGLLPDVRNCNRVLKLLK 183

Query: 178 ESNQVDLAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           + + V+  +    YS     +++P    FN ++   CK G +  A EVL  M+      P
Sbjct: 184 DKSMVNEVEEV--YSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD-P 240

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N ++Y+ L++GL   G F  A EL E+M S   +   A TYN LI GFC+    + A  +
Sbjct: 241 NDVSYNVLVNGLSGKGEFDRAKELIEQM-SMLGLKVSAHTYNPLIRGFCKKEMFEEANDL 299

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
              M   G  P V  Y T+M   C+ G++ +A+   D M N  L PD + Y TLI  + R
Sbjct: 300 RREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSR 359

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G   EAL L  E++ +     +VT+N ++ G CR G ++ A GM + +   G+  +  +
Sbjct: 360 LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVT 419

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           + I++   CQ G L  A EL   ML RG  P        +V   K G    A    FG+ 
Sbjct: 420 FTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKA----FGMK 475

Query: 477 E----MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           E     GF P+  ++ +L+  +C+    L  F+  +ELV K
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCK----LGNFDDANELVQK 512



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 182/369 (49%), Gaps = 10/369 (2%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY TI+  L R  +       L  M  E        +  L+  +S        L +F +
Sbjct: 313 VTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSE 372

Query: 156 IHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
           +    R K   PS+   +T ++    +  +D+A+       +H  L P+   F IL++  
Sbjct: 373 L----RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKH-GLCPDVVTFTILVRGF 427

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           C+ G L  A E+  EM    +  P+ I Y+T I G  K G   +A  + EEM   +   P
Sbjct: 428 CQMGNLPMAKELFDEMLSRGLK-PDCIAYTTRIVGELKLGNPSKAFGMKEEM-KAEGFPP 485

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D +TYNVLI+G C+ G  D A ++++ M+  G  P+   YT++++     G L++A+EVF
Sbjct: 486 DLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVF 545

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            +M    + P  + YT LI+ +   GR+D A +   EM+++G   +++T+N ++ GLC+E
Sbjct: 546 SDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKE 605

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
             ++ A  +  ++   G+  NK +Y I++N +      + A++L + ML R   P   T 
Sbjct: 606 NMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTH 665

Query: 453 NELLVRLCK 461
           + L+  L K
Sbjct: 666 SALMKHLSK 674


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 165/288 (57%), Gaps = 7/288 (2%)

Query: 173 LNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            N+L+ S     ++ LAQ+    +     L+P+   FN L+  + K G L   F + K M
Sbjct: 143 FNILMHSFCKEGEIRLAQSVFD-AITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAM 201

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           + S +  P++ TYS LI+GLCK  +  +  ELF+EM+    ++P+ +T+  LIDG C+ G
Sbjct: 202 QASGVQ-PDVYTYSVLINGLCKESKMDDXNELFDEMLDXG-LVPNGVTFTTLIDGHCKNG 259

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           +VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD I YT
Sbjct: 260 RVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 319

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           TLI+  C+ G ++ A E    M +   + D V +  ++ GLC+EG+  +A  ML ++   
Sbjct: 320 TLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 379

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           G+     +Y +++N  C+KG++    +L++ M   G++P   T N L+
Sbjct: 380 GLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLM 427



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N L++G+ + G ++ 
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLNE 193

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++ + M+ +G  P+V+ Y+ L+NG CKE K+ +  E+FDEM +  L P+ + +TTLI+
Sbjct: 194 XFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLID 253

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D+VT+N ++ GLC++G +++A  +++++   G+  
Sbjct: 254 GHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 313

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G+LE A E    M+             L+  LC+ G + DA   L
Sbjct: 314 DKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 373

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +L+ E+
Sbjct: 374 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM 411



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 153/261 (58%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I+    DL + F LK + Q   ++P+   +++LI   CK   ++  
Sbjct: 172 RPSVVSFNTLMNGYIKLG--DLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDX 229

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 230 NELFDEMLDXGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLVTYNTLI 287

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A+ +++ M   G  P+   YTTL++G CKEG L+ A E    M    ++
Sbjct: 288 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIR 347

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K +I T+ +I+   C++G +     +
Sbjct: 348 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKL 407

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           ++++  DG   +  +Y +++N
Sbjct: 408 MKEMQRDGYVPSVVTYNVLMN 428



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 127/226 (56%), Gaps = 3/226 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +   S  +N L + +++D   N L        L PN   F  LI  HCK G ++ A 
Sbjct: 207 QPDVYTYSVLINGLCKESKMD-DXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAM 265

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+ K+M    +S P+L+TY+TLI GLCK G  ++A +L +EM  K  + PD +TY  LID
Sbjct: 266 EIYKQMLSQSLS-PDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKG-LKPDKITYTTLID 323

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ G ++ A +    M       +   YT L++G C+EG+  +A+++  EM +  LKP
Sbjct: 324 GSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 383

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           +   YT +IN FC+ G V    +L+KEM+  G    +VT+N+++ G
Sbjct: 384 EIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S +I    ++G  
Sbjct: 30  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGIITAYLESGFL 86

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 87  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYP 137

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ FCKEG+++ A+ VFD +  + L+P  + + TL+N + + G ++E   L
Sbjct: 138 ASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRL 197

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
            K M+  G + D+ T+++++ GLC+E K+++   + +++   G+  N  ++  +++  C+
Sbjct: 198 KKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCK 257

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 258 NGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 317

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 318 YTTLIDGSCKEGDLETAFE 336


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 200/394 (50%), Gaps = 41/394 (10%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ---------------------H 195
           HP  R +PS  +++  L  L+ + +VDLA+   + + +                      
Sbjct: 149 HP--RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206

Query: 196 LR-------------LKPNTCIFNILIKHHCKRGTLESAFEV---LKEMKKSQMSYPNLI 239
           LR             L P+   +N LI  +CK+G   + + V   LKEM ++ +S P  +
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGIS-PTAV 265

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T+  LI+G CKN     A+ +FEEM  +  I    +TYN LI G C  GKV+   K+ME 
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEE 324

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M++ G +PN   +  ++ GFCK+G + +A +  D M    ++PD + YT LI+ + R G+
Sbjct: 325 MEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGK 384

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A+ + + M ++G   ++ T+N ++ G  R G    A G+L+++   GI  +  +Y +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C KGE+ KA++LL  M   G  P++ T N ++   C  G  + A      + +  
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +    ++ + ++  C+  K+  A +LL+E++ K
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 168/345 (48%), Gaps = 13/345 (3%)

Query: 90  GFNHNNATYATILD---KLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNC 143
           G   + ATY +++D   K         VD +L++M            G+ +N     SN 
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +   RV E   K   I     S+   ++ ++ L    +V+     ++   + L L PN  
Sbjct: 281 AAAVRVFEEM-KQQGIA---ASVVTYNSLISGLCSEGKVEEGVKLME-EMEDLGLSPNEI 335

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            F  ++K  CK+G +  A + +  M +  +  P+++ Y+ LIDG  + G+  +A+ + E 
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVE-PDVVIYTILIDGYRRLGKMEDAMAVKEA 394

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M +K  I P+  TYN LI GF R G    A  +++ MK  G   +V  Y  L+   C +G
Sbjct: 395 M-AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++++A ++ DEM    L+P+ + Y T+I  FC  G +  A E+   M++   +A++VT+N
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           + +   C+ GK++EA  +L ++    +  N  +Y  +     +KG
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 112/203 (55%), Gaps = 2/203 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+  I+ ILI  + + G +E A  V + M K  +S PN+ TY+ LI G  ++G +R A
Sbjct: 365 VEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGIS-PNVTTYNCLITGFSRSGDWRSA 423

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM  K  I  D +TYNVLI   C  G+V +A K+++ M   G  PN   Y T++ 
Sbjct: 424 SGLLDEMKEKG-IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC +G ++ A E+   M+    + + + Y   I  FC+ G++DEA +LL EM ++    
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 378 DIVTFNIILGGLCREGKIEEALG 400
           + +T+  I  G+  +G   +  G
Sbjct: 543 NGITYETIKEGMMEKGYTPDIRG 565



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 126/247 (51%), Gaps = 9/247 (3%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P   + N L+ G     +VD A+K          +P+++ + T+++G C+ G+L++A +V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCR---AGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             ++K + L P    Y +LI+ +C+   AG +     LLKEM E G     VTF +++ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C+      A+ + E++   GI  +  +Y  +++  C +G++E+ ++L+  M   G  P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T   +L   CK GM  DA   + G+ E   +P+   + +L++    G + L   E  D
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILID----GYRRLGKME--D 387

Query: 509 ELVIKES 515
            + +KE+
Sbjct: 388 AMAVKEA 394


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 179/355 (50%), Gaps = 45/355 (12%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   + ILI+     G L+ A ++L+EMK +     N + ++TL+ GLC  GR  EA+E
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFE-GNAVVHTTLMKGLCDAGRVVEALE 65

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F  M +KD   PD +TY  L+   C+ GK D A+ ++  M   GC P+   ++TL++G 
Sbjct: 66  HFRAM-AKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 320 CKEGKLQEAKEVFDEM--------------------------------------KNFLLK 341
           CK G  ++A  V +++                                      K F   
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF--T 181

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  + +  +IN FC+A  +D A +LL+ M E+GC  ++ TF I++ GLC+  ++ EA  +
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LEK+   G   N  +Y  V+N  C++G+++ A EL +LM  R   P+  T N L+  LCK
Sbjct: 242 LEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           A   E+A      + E G  P+  ++  L++ +C+  ++  AF+L     I ESG
Sbjct: 302 AKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ--TIPESG 354



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 208/457 (45%), Gaps = 42/457 (9%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++   +     +    +L +M     + +  +   LMK   +     RV+E  
Sbjct: 8   NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAG---RVVEAL 64

Query: 154 HKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
                + ++  P +   +  ++ L ++ + D AQ  L+         P+T  F+ LI   
Sbjct: 65  EHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIAR-GCAPDTVTFSTLIDGL 123

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G+ E AF VL+++ +  M   +   + T+I  LC      E       +V      P
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSD-AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
             L +N++I+GFC+   +D A K++E M   GC PNVF +T L+ G CK  ++ EA+++ 
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           ++M      P+ + Y+T+IN  C+ G+VD+A EL + M+ R C  ++VT NI++ GLC+ 
Sbjct: 243 EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR-------------- 438
            +IEEA  +  ++   G   +  +Y  +++  C+  ++++A +L +              
Sbjct: 303 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVT 362

Query: 439 ----------------------LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
                                 +++ +GF P  AT   L++  CK   A +    +  + 
Sbjct: 363 YSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMA 422

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             GF P  ++ + ++  +  G     A +L D +  +
Sbjct: 423 SKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 459



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 206/420 (49%), Gaps = 8/420 (1%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY  ++  L +  KF+    +LR+M    C      F  L+         E+   +   +
Sbjct: 80  TYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 139

Query: 157 HPITREKP-SLKAISTCLNLLIES-NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
             I R    S  A  T +  L    N V+LA   L          P   +FN++I   CK
Sbjct: 140 --IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK-GFTPTVLMFNLVINGFCK 196

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
              L+SA+++L+ M + +   PN+ T++ LI GLCK  R  EA +L E+MV+     P+ 
Sbjct: 197 AKDLDSAYKLLEVMIE-KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG-CSPNV 254

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +TY+ +I+G C+ G+VD A ++ + M+   C PNV  +  L++G CK  +++EA++++  
Sbjct: 255 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 314

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA-DIVTFNIILGGLCREG 393
           M+     PD I Y +LI+  C++ +VDEA +L + + E G  A + VT++ +  G    G
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 374

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++ +A  +   L   G   + A+Y  ++   C+     + +EL+  M  +GF P   T +
Sbjct: 375 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 434

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +L  L +    E A      +   G   ++  + L+VE + R  K   A  +L++++ K
Sbjct: 435 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDK 494



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 215/432 (49%), Gaps = 15/432 (3%)

Query: 88  QKGFNHNNATYATILDKLA-RYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           Q+G  +++A + TI+ +L  +Y   E    VL  +  +       +F  ++  F  C   
Sbjct: 141 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF--CKAK 198

Query: 147 ERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  L+  +K+  +  EK   P++   +  +  L ++N+V  AQ  L+         PN  
Sbjct: 199 D--LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTG-GCSPNVV 255

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            ++ +I   CK+G ++ A+E+ + M++     PN++T++ LIDGLCK  R  EA +L+  
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQLMERRNCP-PNVVTHNILIDGLCKAKRIEEARQLYHR 314

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP-NVFNYTTLMNGFCKE 322
           M  +    PD +TYN LIDG C+  +VD A ++ + +  +G +  N   Y+TL +G+   
Sbjct: 315 M-RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAAL 373

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G++ +A  +F  + +    PD   YT+LI  +C+  R  E +EL++EM  +G    + T 
Sbjct: 374 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           + +LGGL      E A+ + + +   G   +   Y +V+    +  +  KA+ +L  ++ 
Sbjct: 434 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVID 493

Query: 443 ---RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
              R F P  +  + L+  LC+ G  +DA   L  + E GF     S+  L+  + R ++
Sbjct: 494 KRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQR 553

Query: 500 LLFAFELLDELV 511
              A ++ + +V
Sbjct: 554 WDEATQVFEAMV 565



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 137/242 (56%), Gaps = 2/242 (0%)

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +P+  TY +LI GF   G +D A +++E MK+NG   N   +TTLM G C  G++ EA E
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
            F  M      PD + YT L++  C+AG+ DEA  +L+EM  RGC  D VTF+ ++ GLC
Sbjct: 66  HFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK-GELEKAIELLRLMLCRGFLPHY 449
           + G  E+A  +LE +   G+  + A++  ++   C K   +E A ++L +++ +GF P  
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
              N ++   CKA   + A   L  ++E G  P   ++ +L+  +C+  ++  A +LL++
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 510 LV 511
           +V
Sbjct: 245 MV 246



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 201/426 (47%), Gaps = 8/426 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF      +  +++   + K  ++   +L  M  + C  +   F  L+      +    
Sbjct: 178 KGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGE 237

Query: 149 VLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             ++  K+  +T    P++   ST +N L +  QVD A    +   +     PN    NI
Sbjct: 238 AQQLLEKM--VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERR-NCPPNVVTHNI 294

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   CK   +E A ++   M+++  + P++ITY++LIDGLCK+ +  EA +LF+ +   
Sbjct: 295 LIDGLCKAKRIEEARQLYHRMRETGCA-PDIITYNSLIDGLCKSFQVDEAFQLFQTIPES 353

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
                +A+TY+ L  G+   G++  A +I   + + G +P++  YT+L+  +CK  +  E
Sbjct: 354 GVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVE 413

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
             E+ +EM +    P     + ++         + A++L   M  RGC  D + +N+++ 
Sbjct: 414 VVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVE 473

Query: 388 GLCREGKIEEALGMLEKLW--YDGIYLNKASYRIVLNFS-CQKGELEKAIELLRLMLCRG 444
           G+ R  K  +AL +LE++    D  +   +S    L  S CQ G  + A +LL  M  RG
Sbjct: 474 GMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERG 533

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           F    ++ N LL  L +    ++A      +V  G  PE  +  +++  +C   K+  A+
Sbjct: 534 FAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAY 593

Query: 505 ELLDEL 510
           EL+  +
Sbjct: 594 ELVQRM 599



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 2/210 (0%)

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C PN F Y  L+ GF   G L  A ++ +EMK+   + + + +TTL+   C AGRV EAL
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           E  + M  + C  D++T+  ++  LC+ GK +EA GML ++   G   +  ++  +++  
Sbjct: 65  EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC-KAGMAEDAAIALFGLVEMGFKPE 483
           C+ G  E+A  +L  ++ RG     A    ++ RLC K    E A+  L  ++  GF P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
              + L++   C+ + L  A++LL+ ++ K
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEK 213



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/404 (21%), Positives = 161/404 (39%), Gaps = 76/404 (18%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + N  TY+T+++ L +  + +    + + M    C  +      L+         E  
Sbjct: 249 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 308

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            +++H++   T   P +   ++ ++ L +S QVD A    +   +      N   ++ L 
Sbjct: 309 RQLYHRMRE-TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF--------------- 254
             +   G +  A  +   +     S P+L TY++LI   CK  R                
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFS-PDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 426

Query: 255 --------------------REAIELFEEMVSKDQILPDALTYNVLIDG----------- 283
                                 AI+LF+ M ++     DAL YN++++G           
Sbjct: 427 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG-CTDDALIYNLVVEGMARASKHNKAL 485

Query: 284 ---------------------------FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
                                       C+ G+ D AK+++  M   G    V +Y  L+
Sbjct: 486 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLL 545

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G  +  +  EA +VF+ M +    P+      +I+  C A +VD+A EL++ M + GC 
Sbjct: 546 SGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCC 605

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            DI T N ++GG C+ G+ + A  +LE++   G+  N  ++ ++
Sbjct: 606 PDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           R C  +  T+ I++ G    G ++ A+ +LE++  +G   N   +  ++   C  G + +
Sbjct: 3   RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE 62

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A+E  R M  +   P   T   L+  LCKAG  ++A   L  ++  G  P++ +++ L++
Sbjct: 63  ALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLID 121

Query: 493 LICRGRKLLFAFELLDELVIKESG 516
            +C+      AF +L++++ +  G
Sbjct: 122 GLCKFGSEEQAFRVLEDVIQRGMG 145


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 181/337 (53%), Gaps = 3/337 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P  K  +  +  L+   ++  AQN      Q   ++     FN +I   C+ G L+ A  
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFD-EMQSRGVRRTVVSFNTMISGMCRAGDLDGAET 296

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + + M ++ ++ P++ TY  LI GLC+ GR  +A  +FE+M  +  + P+A+ + +LID 
Sbjct: 297 LHRRMSEAGVT-PDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG-MKPNAVVFTILIDA 354

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G  +   ++   M+  G  P+   Y  ++NG C+   L+ A  +  EM++  L+PD
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
           T+ YTTLI+ +C+   +D A+E+ + M   G   D VT+  ++ GL + G+  +A  +L 
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  +  +Y +V++  C+KG+++  + LL+ M  +G  P   T N ++   CK G
Sbjct: 475 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             ++A + L  ++ +G  P+  ++ +L++  C+  K+
Sbjct: 535 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 571



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 154/275 (56%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    ++ L+  L + G    A  +F+EM S+  +    +++N +I G CR G +D A+ 
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG-VRRTVVSFNTMISGMCRAGDLDGAET 296

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M   G  P+V+ Y  L+ G C+ G++++A+ VF++M    +KP+ + +T LI+  C
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G  +  LEL +EM+ERG + D VT+N I+ GLCR   ++ A G++ ++   G+  +  
Sbjct: 357 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++ EL+ A+E+ + M+  G      T   L+  L KAG + DA   L  +
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E G +P++ ++ ++++  CR   +     LL E+
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM 511



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 118/219 (53%)

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           + G  P    +  LM    + G+L  A+ VFDEM++  ++   + + T+I+  CRAG +D
Sbjct: 233 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 292

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  L + M E G   D+ T+  ++ GLCR G+IE+A G+ EK+   G+  N   + I++
Sbjct: 293 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 352

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+KG+ E  +EL R M  RG  P   T N ++  LC+A   + A+  +  +   G +
Sbjct: 353 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 412

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
           P++ ++  L++  C+  +L  A E+   +V +  G  +V
Sbjct: 413 PDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEV 451



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 63/135 (46%)

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           EA     ++ + G   +   FN+++  L R G++  A  + +++   G+     S+  ++
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G+L+ A  L R M   G  P   T   L+  LC+ G  EDA      +   G K
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 482 PESDSWALLVELICR 496
           P +  + +L++  C+
Sbjct: 343 PNAVVFTILIDAHCK 357


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 210/421 (49%), Gaps = 15/421 (3%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+LD   +  + +    +L++M  +      G  LN + +    S   R   + +  
Sbjct: 245 TYNTLLDSFLKEGRKDEASMLLKEMETQG----GGCLLNDVTYNVVISFLAREGHLENAA 300

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNF------LKYSNQHLRLKPNTCIFNILIK 210
             +   + S KA S   N LI +    L + F      L+   ++  + P    +N +I 
Sbjct: 301 KLVDSMRLSKKASSFTYNPLITAL---LERGFVQKVEALQMEMENEGIMPTLVTYNAIIH 357

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
              K   +E+A     EM+   +  P+LITY+++++G CK G  +EA+ L  ++  +  +
Sbjct: 358 GLLKSEQVEAAQLKFAEMRAMGL-LPDLITYNSMLNGYCKAGNLKEALWLLGDL-RRAGL 415

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            P  LTYN LIDG+CR G ++ A+++ E M   GC P+V  YT LMNG  K   L  A+E
Sbjct: 416 APTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMARE 475

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
            FDEM +  L+PD   Y T I      G   +A +L + M  +G   D VT+N+I+ GLC
Sbjct: 476 FFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLC 535

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + G +++A  +  K+  DG+  +  +Y  +++  C++G L +A +LL  M+  G  P   
Sbjct: 536 KTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVV 595

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T   L+   C+ G    A      ++++G +P   ++ +L+  +CR  + L A+    E+
Sbjct: 596 TYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEM 655

Query: 511 V 511
           +
Sbjct: 656 L 656



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 188/385 (48%), Gaps = 41/385 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSN-QHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P+L   +  ++ L++S QV+ AQ  LK++  + + L P+   +N ++  +CK G L+ A 
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQ--LKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEAL 404

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +L +++++ ++ P ++TY+TLIDG C+ G   EA  L EEMV +    PD  TY +L++
Sbjct: 405 WLLGDLRRAGLA-PTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQG-CFPDVCTYTILMN 462

Query: 283 G-----------------FCRG------------------GKVDRAKKIMEFMKNNGCNP 307
           G                   +G                  G   +A ++ E M   G  P
Sbjct: 463 GSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYP 522

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y  +++G CK G L++AK++  +M +  L+PD I YT LI+  C  G + EA +LL
Sbjct: 523 DTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLL 582

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M   G +  +VT+ I++   CR G +  A G   K+   GI  N+ +Y ++++  C+ 
Sbjct: 583 NGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRT 642

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G    A      ML RG  P+  T   L+   C+ G   DA    F + + G  P+  + 
Sbjct: 643 GRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTH 702

Query: 488 ALLVELICRGRKLLFAFELLDELVI 512
             L +   +G  +  A E L+ +V+
Sbjct: 703 NALFKGFDKGH-MYHAIEYLENIVL 726



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 180/385 (46%), Gaps = 41/385 (10%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P ++  +  L +L ++ + D  +   +   Q L ++P    +N L+    K G  + A  
Sbjct: 206 PDVRDCNCVLRVLRDAARWDDVRAVYREMLQ-LEIEPTIVTYNTLLDSFLKEGRKDEASM 264

Query: 224 VLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM-VSKDQILPDALTYNVLI 281
           +LKEM+ +      N +TY+ +I  L + G    A +L + M +SK      + TYN LI
Sbjct: 265 LLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA---SSFTYNPLI 321

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
                 G V + + +   M+N G  P +  Y  +++G  K  +++ A+  F EM+   L 
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD I Y +++N +C+AG + EAL LL +++  G    ++T+N ++ G CR G +EEA  +
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441

Query: 402 LEKLWYDGIYLNKASYRIVLNFS--------------------------------CQK-- 427
            E++   G + +  +Y I++N S                                C +  
Sbjct: 442 KEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI 501

Query: 428 -GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+  KA +L  +M+ +G  P   T N ++  LCK G  +DA      +V  G +P+  +
Sbjct: 502 LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCIT 561

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           +  L+   C    L  A +LL+ +V
Sbjct: 562 YTCLIHAHCERGLLSEARKLLNGMV 586



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 4/264 (1%)

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM--KNNGCNPNV 309
            R+ +   ++ EM+ + +I P  +TYN L+D F + G+ D A  +++ M  +  GC  N 
Sbjct: 222 ARWDDVRAVYREML-QLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLND 280

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  +++   +EG L+ A ++ D M+    K  +  Y  LI      G V +   L  E
Sbjct: 281 VTYNVVISFLAREGHLENAAKLVDSMR-LSKKASSFTYNPLITALLERGFVQKVEALQME 339

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M+  G    +VT+N I+ GL +  ++E A     ++   G+  +  +Y  +LN  C+ G 
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGN 399

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           L++A+ LL  +   G  P   T N L+   C+ G  E+A      +VE G  P+  ++ +
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+    + R L  A E  DE++ K
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSK 483



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 11/214 (5%)

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +G  P+V +   ++       +  + + V+ EM    ++P  + Y TL++ F + GR DE
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 363 ALELLKEMKER--GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA----S 416
           A  LLKEM+ +  GC  + VT+N+++  L REG +E A  ++     D + L+K     +
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLV-----DSMRLSKKASSFT 316

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++    ++G ++K   L   M   G +P   T N ++  L K+   E A +    + 
Sbjct: 317 YNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMR 376

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            MG  P+  ++  ++   C+   L  A  LL +L
Sbjct: 377 AMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDL 410


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 216/430 (50%), Gaps = 13/430 (3%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +   +  +L  L A  +  +A+D VLR+MT   C  +   +  L+K   + +  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----PN 201
           +  LE+   +     +  P + + +T +N   +   +D A     Y   H  L     PN
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-----YGTYHEMLDRGILPN 233

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              ++ +I   CK   ++ A EVL  M K+ +  PN  TY++++ G C +G+ +EAI   
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV-MPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M S D + PD +TYN L+D  C+ G+   A+K+ + M   G  P +  Y TL+ G+  
Sbjct: 293 KKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G L E   + D M    + P+   ++ LI  + + G+VD+A+ +  +M+++G   D VT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +  ++G LC+ G++E+A+   E++  + +      Y  +++  C   + +KA EL+  ML
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG        N ++   CK G   ++      +V +G KP+  +++ L++  C   K+ 
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 502 FAFELLDELV 511
            A +LL  +V
Sbjct: 532 EATKLLASMV 541



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 169/329 (51%), Gaps = 35/329 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  +F+ILI  + K+G ++ A  V  +M++  ++ P+ +TY T+I  LCK+GR  +A
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN-PDTVTYGTVIGILCKSGRVEDA 428

Query: 258 IELFEEMV--------------------------SKDQILP--------DALTYNVLIDG 283
           +  FE+M+                          +K+ IL         D + +N +ID 
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDS 488

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G+V  ++K+ + M   G  P++  Y+TL++G+C  GK+ EA ++   M +  +KPD
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y TLIN +C+  R+++AL L +EM+  G   DI+T+NIIL GL +  +   A  +  
Sbjct: 549 CVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 608

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G  L  ++Y I+L+  C+    ++A+ + + +          T N ++  L K G
Sbjct: 609 GITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVG 668

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVE 492
             ++A      L   G  P+  +++L+ E
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN C + ILI   C  G L+  F  L  + K      + I ++ L+ GLC + R  +A
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 145

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTTL 315
           +++    +++   +P+  +YN+L+ G C   +   A ++++ M ++G  C P+V +YTT+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGF KEG L +A   + EM +  + P+ + Y+++I   C+A  +D+A+E+L  M + G 
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  T+N I+ G C  G+ +EA+G L+K+  DG+  +  +Y  ++++ C+ G   +A +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWALLV 491
           +   M  RG  P   T   LL      G    A + + GL+++    G  P    +++L+
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPNHYVFSILI 381



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 194/388 (50%), Gaps = 9/388 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F++++ ++G      TY T+L   A       +  +L  M       +  +F  L+
Sbjct: 323 ARKMFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL- 196
             ++     ++ + +F K+       P      T + +L +S +V+ A   ++Y  Q + 
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQ-QGLNPDTVTYGTVIGILCKSGRVEDA---MRYFEQMID 437

Query: 197 -RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            RL P   ++N LI   C     + A E++ EM    +   + I ++++ID  CK GR  
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVI 496

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+ +LF+ MV +  + PD +TY+ LIDG+C  GK+D A K++  M + G  P+   Y TL
Sbjct: 497 ESEKLFDLMV-RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+CK  ++++A  +F EM++  + PD I Y  ++    +  R   A EL   + E G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G  ++A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAG 463
           L   +   G +P   T + +   L + G
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 5/260 (1%)

Query: 257 AIELFEEMV--SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           A+  +  M     D++ P+  TY +LI   C  G++D     +  +   G   +   +T 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 315 LMNGFCKEGKLQEAKE-VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           L+ G C + +  +A + V   M      P+   Y  L+   C   R  EALELL+ M + 
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 374 G--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           G  C  D+V++  ++ G  +EG +++A G   ++   GI  N  +Y  ++   C+   ++
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           KA+E+L  M+  G +P+  T N ++   C +G  ++A   L  +   G +P+  ++  L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 492 ELICRGRKLLFAFELLDELV 511
           + +C+  +   A ++ D + 
Sbjct: 312 DYLCKNGRCTEARKMFDSMT 331



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 166/371 (44%), Gaps = 35/371 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG-IFLNL 136
           A+ +F+ +  Q+G N +  TY T++  L +  + E       QM  E  +   G I  N 
Sbjct: 393 AMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--RLSPGNIVYNS 449

Query: 137 MKHFSNC------SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD------- 183
           + H S C         E +LEM  +                CL+ +  ++ +D       
Sbjct: 450 LIH-SLCIFDKWDKAKELILEMLDR--------------GICLDTIFFNSIIDSHCKEGR 494

Query: 184 -LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
            +    L      + +KP+   ++ LI  +C  G ++ A ++L  M    M  P+ +TY+
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK-PDCVTYN 553

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TLI+G CK  R  +A+ LF EM S   + PD +TYN+++ G  +  +   AK++   +  
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSG-VSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +G    +  Y  +++G CK     EA  +F  +    L+ +T  +  +I    + GR DE
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A +L   +   G   D+ T++++   L  +G +EE   +   +  +G   N      ++ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 423 FSCQKGELEKA 433
              Q+G++ +A
Sbjct: 733 KLLQRGDITRA 743


>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           salviifolia]
          Length = 431

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 153/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GL K  +  +A
Sbjct: 173 LRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLSKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 DELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ D+M    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P A++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSAVSYNTLMNGYIRLGVLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG  KE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++ +   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G  P++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 148/261 (56%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS  + +T +N  I    +D  + F LK +     ++P+   +++LI    K   ++ A
Sbjct: 174 RPSAVSYNTLMNGYIRLGVLD--EGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 DELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G   D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 132/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLSKESKMDDADELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GLCK G  ++A +L ++M S+  + PD +TY  L
Sbjct: 266 AMEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM-SRKGLKPDKITYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            PDT  YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 NPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +  F EA  L + +VS+                      D  +   
Sbjct: 18  TLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKNN----------------G 304
           L    L  GF R                  D  +K++E++                   G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GL +E K+++A  + +++   G+  N  ++  +++  
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +  LP   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFE 338


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 174/318 (54%), Gaps = 9/318 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N L+  +CK G+L+ AF++++ MK++ +  P+L TY+ LI+G+C  G  RE 
Sbjct: 271 LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI-LPDLCTYNILINGVCNAGSIREG 329

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +EL + M S  ++ PD +TYN LIDG    G    AKK+ME M+N+G  PN   +   + 
Sbjct: 330 LELMDVMKSL-KLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLK 388

Query: 318 GFCKEGKLQEA----KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
             CKE K +E     KE+  EM  F   PD + Y TLI  + + G +  ALE+++EM ++
Sbjct: 389 WLCKEEKREEVTRKVKELV-EMHGF--SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K + +T N IL  LC+E K++EA  +L+     G  +++ +Y  ++    ++ ++EKA
Sbjct: 446 GIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKA 505

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            E+   M      P   T N L+  LC  G  E A      L E G  P+  ++  ++  
Sbjct: 506 FEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILG 565

Query: 494 ICRGRKLLFAFELLDELV 511
            C+  ++  AFE  +E +
Sbjct: 566 YCKEGRVEKAFEFYNESI 583



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 167/317 (52%), Gaps = 5/317 (1%)

Query: 196 LRLKPNTCIFNILI---KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           L+LKPN    N L+     +    ++ SA EV  +M K  +S  ++ T++ L++G C  G
Sbjct: 160 LKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSL-DVKTFNVLVNGYCLEG 218

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  +A+ + E MVS+  + PD +TYN ++    + G++   K ++  MK NG  PN   Y
Sbjct: 219 KLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTY 278

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             L+ G+CK G L+EA ++ + MK   + PD   Y  LIN  C AG + E LEL+  MK 
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKS 338

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
              + D+VT+N ++ G    G   EA  ++E++  DG+  N+ ++ I L + C++ + E+
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREE 398

Query: 433 AIELLR-LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
               ++ L+   GF P   T + L+    K G    A   +  + + G K  + +   ++
Sbjct: 399 VTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458

Query: 492 ELICRGRKLLFAFELLD 508
           + +C+ RK+  A  LLD
Sbjct: 459 DALCKERKVDEAHNLLD 475



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 171/320 (53%), Gaps = 8/320 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCS 144
           E  G   N  T+   L  L + +K E V   ++++  E   F   I  +  L+K +    
Sbjct: 372 ENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELV-EMHGFSPDIVTYHTLIKAYLKVG 430

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
                LEM  ++     +  ++  ++T L+ L +  +VD A N L  +++   +  +   
Sbjct: 431 DLSGALEMMREMGQKGIKMNTI-TLNTILDALCKERKVDEAHNLLDSAHKRGYI-VDEVT 488

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI  + +   +E AFE+  EMK+ +++ P + T+++LI GLC +G+   A+E F+E+
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMKRIKIT-PTVTTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            ++  +LPD  T+N +I G+C+ G+V++A +       +   P+ +    L+NG CKEG 
Sbjct: 548 -AESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            ++A   F+ +     + DT+ Y T+I+ FC+  ++ EA +LL EM+E+  + D  T+N 
Sbjct: 607 TEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNS 665

Query: 385 ILGGLCREGKIEEALGMLEK 404
           I+  L  +GK+ EA  +L+K
Sbjct: 666 IITSLMEDGKLSEADELLKK 685



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 36/273 (13%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   ++ LIK + K G L  A E+++EM +  +   N IT +T++D LCK  +  EA  
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM-NTITLNTILDALCKERKVDEAHN 472

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L +    +  I+ D +TY  LI G+ R  KV++A ++ + MK     P V  + +L+ G 
Sbjct: 473 LLDSAHKRGYIV-DEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGL 531

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE---------- 369
           C  GK + A E FDE+    L PD   + ++I  +C+ GRV++A E   E          
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591

Query: 370 --------------MKERGC----------KADIVTFNIILGGLCREGKIEEALGMLEKL 405
                         M E+            + D VT+N ++   C++ K++EA  +L ++
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
               +  ++ +Y  ++    + G+L +A ELL+
Sbjct: 652 EEKRLEPDRFTYNSIITSLMEDGKLSEADELLK 684



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 142/309 (45%), Gaps = 31/309 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+   +  QKG   N  T  TILD L + +K +    +L           E  +  L+
Sbjct: 435 ALEMMREMG-QKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLI 493

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHL 196
             +      E+  EM+ ++  I +  P++   ++ +  L    + +LA + F + +   L
Sbjct: 494 MGYFREEKVEKAFEMWDEMKRI-KITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGL 552

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
              P+ C FN +I  +CK G +E AFE   E  K     P+  T + L++GLCK G   +
Sbjct: 553 L--PDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFK-PDNYTCNILLNGLCKEGMTEK 609

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+  F  ++++ ++  D +TYN +I  FC+  K+  A  ++  M+     P+ F Y +++
Sbjct: 610 ALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSII 667

Query: 317 NGFCKEGKLQEAKEV-------FDEMKNFL----------------LKPDTIGYTTLINC 353
               ++GKL EA E+       F  MK  L                LK + I Y+ +IN 
Sbjct: 668 TSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINE 727

Query: 354 FCRAGRVDE 362
            C  GR+ E
Sbjct: 728 LCSRGRLKE 736


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 216/446 (48%), Gaps = 43/446 (9%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+L  L   KK+E  + ++ +M    C  +E  F   ++ F    L +R +++  ++
Sbjct: 192 TYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM 251

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS---------NQHLR---------- 197
            P     P +   ST +N   E   VD A + L            N  L+          
Sbjct: 252 -PRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWED 310

Query: 198 ------------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
                         PN   F++LI   C+   ++SA EVL++M+K     P+ + Y+ +I
Sbjct: 311 IGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE-PDTVNYNIII 369

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           + L + GR  +A+ L   MV K    PDAL +N ++ GFCR  +   A +++  M  + C
Sbjct: 370 NSLSERGRVDDALRLLNSMVCK----PDALGFNAVLKGFCRAERWHDASELIAQMFRDDC 425

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
                 +  L++  C+ G +  A +VF++M  +   PD + Y++L+N F   G V+ A++
Sbjct: 426 PLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ 485

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L + M    CK DI ++N +L GLCR  + E+A  ++ ++       N+ ++ I++N  C
Sbjct: 486 LFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLC 542

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           QKG +++AIE+L  M   G  P   T N L+    + G  +D   AL  L  M  KP++ 
Sbjct: 543 QKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDD---ALKLLSTMSCKPDAI 599

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           S+   ++ +CR  +   A EL+ E++
Sbjct: 600 SYNSTLKGLCRAERWQDAEELVAEML 625



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 165/318 (51%), Gaps = 11/318 (3%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R  PN   F   I+  C+ G L+ A ++L +M +   + P+++ YSTLI+G  + G   +
Sbjct: 220 RCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCT-PDVVIYSTLINGFSEQGHVDQ 278

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A++L   M+ K    P+ + YN  + G C   + +   ++M  M   GC+PN   ++ L+
Sbjct: 279 ALDLLNTMLCK----PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLI 334

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +  C+   +  A EV ++M+ +  +PDT+ Y  +IN     GRVD+AL LL  M    CK
Sbjct: 335 SSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CK 391

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D + FN +L G CR  +  +A  ++ +++ D   L + ++ I+++  CQ G +  A ++
Sbjct: 392 PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQV 451

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M      P   T + LL    + G+ E  AI LF    M  KP+  S+  +++ +CR
Sbjct: 452 FEQMPRYRCTPDIVTYSSLLNGFSEQGLVE-VAIQLFR--SMPCKPDIFSYNAVLKGLCR 508

Query: 497 GRKLLFAFELLDELVIKE 514
             +   A EL+ E+V K+
Sbjct: 509 AARWEDAGELIAEMVGKD 526



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 159/305 (52%), Gaps = 12/305 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N L+  +C+ G L  A  VL   + +  +  N++TY+ LIDG C++GR  +A+ L   M 
Sbjct: 128 NTLVAGYCRDGRLADAERVLGAARATGAA--NVVTYTALIDGYCRSGRLDDALRLIASM- 184

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
               + PD  TYN ++ G C   K + A+++M  M  N C PN   + T +  FC+ G L
Sbjct: 185 ---PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLL 241

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A ++ D+M  +   PD + Y+TLIN F   G VD+AL+LL  M    CK + V +N  
Sbjct: 242 DRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC   + E+   ++ ++   G   N+A++ ++++  CQ   ++ A+E+L  M   G 
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P     N ++  L + G  +D   AL  L  M  KP++  +  +++  CR  +   A E
Sbjct: 359 EPDTVNYNIIINSLSERGRVDD---ALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASE 415

Query: 506 LLDEL 510
           L+ ++
Sbjct: 416 LIAQM 420



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 186/383 (48%), Gaps = 20/383 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ NT+  +     N   Y   L  L   +++E +  ++ +M  + C  +E  F  L+
Sbjct: 279 ALDLLNTMLCKP----NTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLI 334

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 +L +  +E+  ++     E P     +  +N L E  +VD A   L      + 
Sbjct: 335 SSLCQNNLVDSAVEVLEQMEKYGCE-PDTVNYNIIINSLSERGRVDDALRLLN----SMV 389

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+   FN ++K  C+      A E++ +M +       + T++ LID LC+NG    A
Sbjct: 390 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEM-TFNILIDTLCQNGLVNYA 448

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++FE+M  + +  PD +TY+ L++GF   G V+ A ++   M    C P++F+Y  ++ 
Sbjct: 449 TQVFEQM-PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLK 504

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+  + ++A E+  EM      P+ + +  LIN  C+ G VD A+E+L++M   G   
Sbjct: 505 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 564

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI T+N ++ G   +G++++AL +L  +       +  SY   L   C+    + A EL+
Sbjct: 565 DIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELV 621

Query: 438 RLMLCRGFLPHYAT---SNELLV 457
             ML     P+  T   +N LL+
Sbjct: 622 AEMLRNKCTPNEVTFKYANHLLM 644



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 158/308 (51%), Gaps = 10/308 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           NILIK  C  G L  A  VL  +K +  +    ++++TL+ G C++GR  +A  +     
Sbjct: 94  NILIKKLCATGRLADAERVLDALKAAAAAD--AVSHNTLVAGYCRDGRLADAERVLG--A 149

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           ++     + +TY  LIDG+CR G++D A +++  M      P+ + Y T++ G C   K 
Sbjct: 150 ARATGAANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKW 206

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EA+E+  EM      P+ + + T I  FC+ G +D A++LL +M   GC  D+V ++ +
Sbjct: 207 EEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTL 266

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G   +G +++AL +L  +       N   Y   L   C     E   EL+  M+ +G 
Sbjct: 267 INGFSEQGHVDQALDLLNTMLCKP---NTVCYNAALKGLCIAERWEDIGELMAEMVRKGC 323

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+ AT + L+  LC+  + + A   L  + + G +P++ ++ +++  +    ++  A  
Sbjct: 324 SPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALR 383

Query: 506 LLDELVIK 513
           LL+ +V K
Sbjct: 384 LLNSMVCK 391


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 171/295 (57%), Gaps = 2/295 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ PN   +  LI   C  G L+ AF +L EM    ++ PN+ T++TL+DGLCK G+ RE
Sbjct: 219 RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVN-PNVCTFNTLVDGLCKEGKMRE 277

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  L   M+ K+ + PD  TYN L+DG+    +  +AK +   M   G   +V +Y+ ++
Sbjct: 278 AKSLVAVMM-KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMI 336

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G  K   L EA ++F+ M+N  + PD + Y++LI+  C++GR++ AL+ + EM +RG  
Sbjct: 337 SGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP 396

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            +++T+  ++  LC+  ++++A+ +L+K+   GI  N  +Y I+++  C+ G L  A ++
Sbjct: 397 PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKV 456

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            + +L +G      T + ++  LCK  + ++A   L  + + G  P++ ++  ++
Sbjct: 457 FQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETII 511



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 186/351 (52%), Gaps = 5/351 (1%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R  P +      L  L+++    +  +  +    H  ++ N    NILI  +C    + S
Sbjct: 44  RPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELH-GIQSNYITLNILINSYCHLRQINS 102

Query: 221 AFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           AF V  ++ K  + Y P++ITY+TLI GLC NG+ +E++   + +VS+  I  D ++Y  
Sbjct: 103 AFSVFAKILK--LGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG-IKLDHVSYGT 159

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI+G C+ G+   A +++  ++   C P+V  Y T+++G CK+  +++A +++ EM    
Sbjct: 160 LINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKR 219

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P+ + YT+LI  FC  G++D+A  LL EM  +    ++ TFN ++ GLC+EGK+ EA 
Sbjct: 220 VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAK 279

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            ++  +  +G+  +  +Y  +++      E  KA  +  +M   G      + + ++  L
Sbjct: 280 SLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGL 339

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            K  M ++A     G+      P+  +++ L++ +C+  ++  A + +DE+
Sbjct: 340 SKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 390



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 6/210 (2%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  ++    K         +F  M+   ++ + I    LIN +C   +++ A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             ++ + G + DI+T+  ++ GLC  G+++E+L   ++L   GI L+  SY  ++N  C+
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 427 KGELEKAIELLRLM---LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            G+   A+ LLR +   +CR   P     N ++  LCK  +  DA      + E    P 
Sbjct: 167 IGQTGPALRLLRKIEGEICR---PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPN 223

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++  L+   C   +L  AF LL+E+V+K
Sbjct: 224 VVTYTSLIYGFCIVGQLDKAFGLLNEMVLK 253


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 165/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A  LF+EM+ K  ++P+ +T+  LIDG 
Sbjct: 194 KNAMQVSGVQ-PDVYTYSVLINGLCKESKMDDANXLFDEMLDKG-LVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    L PD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A  +FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 4/279 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLR-PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 265 -VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
            VS  Q  PD  TY+VLI+G C+  K+D A  + + M + G  PN   +TTL++G CK G
Sbjct: 198 QVSGVQ--PDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G   D +T+ 
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYT 315

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNV 375

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           G  P   T   ++   CK G     +  L  +   G+ P
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 152/299 (50%), Gaps = 19/299 (6%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         L   
Sbjct: 45  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYR--------LTKE 94

Query: 275 LTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQ 326
             + V  D  CR       K+   K +  F + +   G   +++ +  LM+ F KEG+++
Sbjct: 95  HKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIR 153

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+ VFD +  + L+P  + + TL+N + + G +DE   L   M+  G + D+ T+++++
Sbjct: 154 LAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLI 213

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +   
Sbjct: 214 NGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           P   T N L+  LCK G  + A   +  ++  G  P+  ++  L++  C+   L  AFE
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFE 332


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 213

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 214 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 272

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L +A  + DEM    LKPD   YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 273 GLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRL 332

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  I+ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 333 DDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLL 392

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 393 KEMQRNGHVPSVXTYNVLM 411



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 177

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 178 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 237

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G + +A G+++++   G+  
Sbjct: 238 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKP 297

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             ++  LC+ G   DA   L
Sbjct: 298 DKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKML 357

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 358 REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 395



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 2/287 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P++++Y+TL++G  + G   E   L   M
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLR-PSVVSYNTLMNGYIRLGDLDEGFRLKSAM 185

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           ++   + PD  TY+VLI+G C+  K+D A ++ + M   G  PN   +TTL++G CK G+
Sbjct: 186 LASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 244

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G +++A  L+ EM  +G K D  T+  
Sbjct: 245 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTT 304

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG ++ A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 305 LIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVG 364

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             P   T   ++   CK G     +  L  +   G  P   ++ +L+
Sbjct: 365 LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLM 411



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 153/261 (58%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 156 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 213

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 214 NELFDEMLVKGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 271

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G +++A  +++ M   G  P+ F YTTL++G CKEG L  A E    M    ++
Sbjct: 272 YGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIR 331

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT +I+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 332 LDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 391

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  +G   +  +Y +++N
Sbjct: 392 LKEMQRNGHVPSVXTYNVLMN 412



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 247

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GLCK G   +A  L +EM  K  + PD  TY  L
Sbjct: 248 AMEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKG-LKPDKFTYTTL 305

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT +++G C+EG+  +A+++  EM +  L
Sbjct: 306 IDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGL 365

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPDT  YT +IN FC+ G V +  +LLKEM+  G    + T+N+++ G
Sbjct: 366 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 52/320 (16%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDAL 275
           L +Y T+I  LC +  F EA  L + +VS+                      D  +   L
Sbjct: 1   LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60

Query: 276 TYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NGC 305
               L  GF R                  D  +K++E +                   G 
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 120

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
             +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C
Sbjct: 181 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G ++ A+E+ + ML +  LP   T N L+  LCK G    A   +  +   G KP+  
Sbjct: 241 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKF 300

Query: 486 SWALLVELICRGRKLLFAFE 505
           ++  L++  C+   L  AFE
Sbjct: 301 TYTTLIDGCCKEGDLDAAFE 320



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/299 (20%), Positives = 127/299 (42%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 33  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVP-- 88

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E +           Y  L+ GF            ++E
Sbjct: 89  ---------------FDTCRKVLEHLMK-------LRYFKLVWGF------------YEE 114

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G 
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T   
Sbjct: 175 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK G  + A      ++     P+  ++  L+  +C+   L  A  L+DE+ +K
Sbjct: 235 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMK 293


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 216/430 (50%), Gaps = 13/430 (3%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +   +  +L  L A  +  +A+D VLR+MT   C  +   +  L+K   + +  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----PN 201
           +  LE+   +     +  P + + +T +N   +   +D A     Y   H  L     PN
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-----YGTYHEMLDRGILPN 233

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              ++ +I   CK   ++ A EVL  M K+ +  PN  TY++++ G C +G+ +EAI   
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV-MPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M S D + PD +TYN L+D  C+ G+   A+K+ + M   G  P +  Y TL+ G+  
Sbjct: 293 KKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G L E   + D M    + P+   ++ LI  + + G+VD+A+ +  +M+++G   D VT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +  ++G LC+ G++E+A+   E++  + +      Y  +++  C   + +KA EL+  ML
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG        N ++   CK G   ++      +V +G KP+  +++ L++  C   K+ 
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 502 FAFELLDELV 511
            A +LL  +V
Sbjct: 532 EATKLLASMV 541



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 199/406 (49%), Gaps = 10/406 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY +++D L +  +      +   MT    K     +  L++ ++       +
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT---KGAL 355

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
           +EM   +  + R    P+    S  +    +  +VD  Q  L +S    + L P+T  + 
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD--QAMLVFSKMRQQGLNPDTVTYG 413

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G +E A    ++M   ++S P  I Y++LI  LC   ++ +A EL  EM+ 
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I  D + +N +ID  C+ G+V  ++K+ + M   G  P++  Y+TL++G+C  GK+ 
Sbjct: 473 RG-ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++   M +  +KPD + Y TLIN +C+  R+++AL L +EM+  G   DI+T+NIIL
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL +  +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + + +      
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
               T N ++  L K G  ++A      L   G  P+  +++L+ E
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN C + ILI   C  G L+  F  L  + K      + I ++ L+ GLC + R  +A
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 145

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTTL 315
           +++    +++   +P+  +YN+L+ G C   +   A ++++ M ++G  C P+V +YTT+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGF KEG L +A   + EM +  + P+ + Y+++I   C+A  +D+A+E+L  M + G 
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  T+N I+ G C  G+ +EA+G L+K+  DG+  +  +Y  ++++ C+ G   +A +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWALLV 491
           +   M  RG  P   T   LL      G    A + + GL+++    G  P    +++L+
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPNHYVFSILI 381



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 194/388 (50%), Gaps = 9/388 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F++++ ++G      TY T+L   A       +  +L  M       +  +F  L+
Sbjct: 323 ARKMFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL- 196
             ++     ++ + +F K+       P      T + +L +S +V   ++ ++Y  Q + 
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQ-QGLNPDTVTYGTVIGILCKSGRV---EDAMRYFEQMID 437

Query: 197 -RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            RL P   ++N LI   C     + A E++ EM    +   + I ++++ID  CK GR  
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVI 496

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+ +LF+ MV +  + PD +TY+ LIDG+C  GK+D A K++  M + G  P+   Y TL
Sbjct: 497 ESEKLFDLMV-RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+CK  ++++A  +F EM++  + PD I Y  ++    +  R   A EL   + E G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G  ++A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAG 463
           L   +   G +P   T + +   L + G
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 5/260 (1%)

Query: 257 AIELFEEMV--SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           A+  +  M     D++ P+  TY +LI   C  G++D     +  +   G   +   +T 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 315 LMNGFCKEGKLQEAKE-VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           L+ G C + +  +A + V   M      P+   Y  L+   C   R  EALELL+ M + 
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 374 G--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           G  C  D+V++  ++ G  +EG +++A G   ++   GI  N  +Y  ++   C+   ++
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           KA+E+L  M+  G +P+  T N ++   C +G  ++A   L  +   G +P+  ++  L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 492 ELICRGRKLLFAFELLDELV 511
           + +C+  +   A ++ D + 
Sbjct: 312 DYLCKNGRCTEARKMFDSMT 331



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 166/371 (44%), Gaps = 35/371 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG-IFLNL 136
           A+ +F+ +  Q+G N +  TY T++  L +  + E       QM  E  +   G I  N 
Sbjct: 393 AMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--RLSPGNIVYNS 449

Query: 137 MKHFSNC------SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD------- 183
           + H S C         E +LEM  +                CL+ +  ++ +D       
Sbjct: 450 LIH-SLCIFDKWDKAKELILEMLDR--------------GICLDTIFFNSIIDSHCKEGR 494

Query: 184 -LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
            +    L      + +KP+   ++ LI  +C  G ++ A ++L  M    M  P+ +TY+
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK-PDCVTYN 553

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TLI+G CK  R  +A+ LF EM S   + PD +TYN+++ G  +  +   AK++   +  
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSG-VSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +G    +  Y  +++G CK     EA  +F  +    L+ +T  +  +I    + GR DE
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A +L   +   G   D+ T++++   L  +G +EE   +   +  +G   N      ++ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 423 FSCQKGELEKA 433
              Q+G++ +A
Sbjct: 733 KLLQRGDITRA 743


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 237/493 (48%), Gaps = 33/493 (6%)

Query: 43  PVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYAT-I 101
           P+E     + +R RS  I+     S+++ + + +    +F  +   K ++    T    I
Sbjct: 47  PMEDGLKVISSRIRSYTIT-----SVLQEQPDTRLGFRLF--IWSLKSWHLRCRTVQDLI 99

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           + KL +   FE    VL+++     K     F  L++ +S   + E+ +E F  +     
Sbjct: 100 IGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDC 159

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLE 219
            KP L A +  L+ L+      LA   L   NQ L+  L P+   + ILI   CK    +
Sbjct: 160 -KPDLFAFNLILHFLVRKEAFLLA---LAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A  +  EM    +  PN I YS ++ GLC+  +  +A  LF +M +      D +TYNV
Sbjct: 216 DALVLFDEMTDRGI-LPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG-CNRDLITYNV 273

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L++GFC+ G +D A  +++ +  +G    V  Y  L+NG  +  + +EA   + +M    
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           +KPD + YT +I    + GRV EAL LL EM ERG + D + +N ++ G C  G ++EA 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +  ++     + N  +Y I++   C+ G + KA  + + M   G LP   T N L+  L
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 460 CKAGMAEDAAIALFGLVEMGFKP--------------ESDSWALLVELICRGRKLLFAFE 505
           CKA   E+A + LF  +E+  KP              +  S  +++E +C    +L A++
Sbjct: 454 CKANRLEEARL-LFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYK 512

Query: 506 LLDELVIKESGTI 518
           LL +LV  +SG +
Sbjct: 513 LLMQLV--DSGVL 523



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 174/357 (48%), Gaps = 26/357 (7%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           Y  +++ L R +++E      ++M  E  K    ++  +++  S      RV E    + 
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ---EGRVTEALTLLG 362

Query: 158 PITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            +T     L+  + C N LI+       +D A++     ++H    PN   ++ILI   C
Sbjct: 363 EMTER--GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH-DCFPNNHTYSILICGMC 419

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM--------- 264
           K G +  A  + KEM+K     P+++T+++LI+GLCK  R  EA  LF +M         
Sbjct: 420 KNGLINKAQHIFKEMEKLG-CLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLF 478

Query: 265 ----VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
                  D++  D  +  V+++  C  G + +A K++  + ++G  P++  Y  L+NGFC
Sbjct: 479 LRLSQGTDKVF-DIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G +  A ++F EM+     PD++ Y TLI+   RAGR ++ALE+ ++M ++GC  +  
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESS 597

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           T+  I+   CRE  I  AL +  K   D         R+V   S    EL+ AI  L
Sbjct: 598 TYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAE-SFDNEELQTAIRRL 653



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 38/248 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           P+   +NILI   CK G +  AF++ KEM+ K  M  P+ +TY TLIDGL + GR  +A+
Sbjct: 524 PDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHM--PDSVTYGTLIDGLYRAGRNEDAL 581

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI-MEFMKN--------------- 302
           E+FE+MV K  + P++ TY  ++   CR   +  A  + M+++++               
Sbjct: 582 EIFEQMVKKGCV-PESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAES 640

Query: 303 ------------------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
                                N ++  YT  + G  +  +  EA  +F  +K+F +   +
Sbjct: 641 FDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISS 700

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
                LI   C    +D A+++     ERG +      N +L  L    + ++AL +  +
Sbjct: 701 ASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANR 760

Query: 405 LWYDGIYL 412
           +   G  L
Sbjct: 761 MEASGTEL 768


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           RVL M  K       +P L   +T +++L+  N++D A  FL+   Q + ++PN   +N 
Sbjct: 253 RVLTMMQKAGI----EPDLSICNTAIHVLVMGNRLDKAVRFLE-RMQIVEIEPNVITYNC 307

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LIK +C    LE A E++ EM     S P+ I+Y T++  LCK  R +E   L E+M+  
Sbjct: 308 LIKGYCDLHRLEDAMELIAEMPFKGCS-PDKISYYTVMGFLCKEKRIKEVRLLMEKMLKD 366

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             +LPD +TYN  +    + G  D A + +   +      +   Y+ +++ FC+EG++ +
Sbjct: 367 SNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDK 426

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           AKE+ +EM +    PD + YT++IN  C+  +VD+A ++L++M + GCK + V++  +L 
Sbjct: 427 AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN 486

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G   EA  M+     D    N  +Y ++++   ++G+  +A +L+R M+ +GF P
Sbjct: 487 GLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFP 546

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                N L+  LC+    ++A   +   +  G      ++  ++   C+   L  A  LL
Sbjct: 547 TPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLL 606

Query: 508 DELVI 512
           D++ +
Sbjct: 607 DDMYL 611



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 195/378 (51%), Gaps = 13/378 (3%)

Query: 143 CSLH--ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD----LAQNFLKYSNQHL 196
           C LH  E  +E+  ++ P     P   +  T +  L +  ++     L +  LK SN   
Sbjct: 313 CDLHRLEDAMELIAEM-PFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSN--- 368

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            L P+   +N  +    K G  + A E L+E ++ +    + + YS ++   C+ GR  +
Sbjct: 369 -LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV-DKVGYSAIVHSFCREGRMDK 426

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A E+  EM SK  I PD +TY  +I+G C+  KVD+AKK++  M  +GC PN  +YT L+
Sbjct: 427 AKEIVNEMFSKGCI-PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 485

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG CK G   EA+E+ +  +     P+ I Y+ L++ F R G+  EA +L++EM ++G  
Sbjct: 486 NGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFF 545

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
              V  N+++  LC+E K++EA   +E+   +G  +N  ++  V++  CQK +LE A+ L
Sbjct: 546 PTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSL 605

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  M      P   T   ++  L K G  E+A      ++ +G  P   ++  ++   CR
Sbjct: 606 LDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR 665

Query: 497 GRKLLFAFELLDELVIKE 514
             ++    +LL++++ ++
Sbjct: 666 MGRVEDLLKLLEKMLSRQ 683



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 199/407 (48%), Gaps = 11/407 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH-E 147
           KG + +  +Y T++  L + K+ + V  ++ +M  ++    + +  N   H  +   H +
Sbjct: 331 KGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 390

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIF 205
             LE   +     R +      S  ++      ++D A+  +   +S   +   P+   +
Sbjct: 391 EALEFLREAEE-RRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI---PDVVTY 446

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             +I   C+   ++ A ++L++M K     PN ++Y+ L++GLCKNG   EA E+   M 
Sbjct: 447 TSVINGLCQERKVDQAKKMLRQMYKHGCK-PNTVSYTALLNGLCKNGNSLEAREMMN-MS 504

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +D  +P+A+TY+VL+ GF R GK   A  ++  M   G  P       L+   C+E K+
Sbjct: 505 EEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 564

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            EAK   ++  N     + + +TT+I+ FC+   ++ AL LL +M       D+VT+  I
Sbjct: 565 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTI 624

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           +  L ++G+IEEA  +  K+   G+     +YR V++  C+ G +E  ++LL  ML R  
Sbjct: 625 IDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ- 683

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
                  N+++ +LC  G  E A   L  ++    K ++++  +L+E
Sbjct: 684 -ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIE 729



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 42/352 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   ++ +N L +  +VD A+  L+   +H   KPNT  +  L+   CK G    A E
Sbjct: 441 PDVVTYTSVINGLCQERKVDQAKKMLRQMYKH-GCKPNTVSYTALLNGLCKNGNSLEARE 499

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           ++  M +     PN ITYS L+ G  + G+  EA +L  EM+ K    P  +  N+LI  
Sbjct: 500 MMN-MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG-FFPTPVEINLLIQS 557

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+  KVD AK+ ME   NNGC  NV N+TT+++GFC++  L+ A  + D+M      PD
Sbjct: 558 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 617

Query: 344 TIGYTTLINC-----------------------------------FCRAGRVDEALELLK 368
            + YTT+I+                                    +CR GRV++ L+LL+
Sbjct: 618 VVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLE 677

Query: 369 EMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           +M  R  C+     +N ++  LC  G +E+A  +L K+      ++  +  +++     K
Sbjct: 678 KMLSRQECRT---AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSK 734

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           G    +  +   M  R  +P      ++  +L   G +E+A   +   VE G
Sbjct: 735 GIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 786



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 127/273 (46%), Gaps = 38/273 (13%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+A  Y  ++  + R GK+  A +++  M+  G  P++    T ++      +L +A   
Sbjct: 232 PEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            + M+   ++P+ I Y  LI  +C   R+++A+EL+ EM  +GC  D +++  ++G LC+
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349

Query: 392 EGKIEEALGMLEKLWYDGIYL------------------------------------NKA 415
           E +I+E   ++EK+  D   L                                    +K 
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  +++  C++G ++KA E++  M  +G +P   T   ++  LC+    + A   L  +
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            + G KP + S+  L+  +C+    L A E+++
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 502



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 13/193 (6%)

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           SN+H    P+   +  +I    K+G +E A ++  +M +  +  P  +TY T+I   C+ 
Sbjct: 612 SNKH----PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL-IPTPVTYRTVIHQYCRM 666

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  + ++L E+M+S+ +       YN +I+  C  G +++A K++  +       +   
Sbjct: 667 GRVEDLLKLLEKMLSRQEC---RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANT 723

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
              L+  +  +G    +  V   M N  L PD      +       G+ +EA +L+    
Sbjct: 724 CHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFV 783

Query: 372 ERG-----CKADI 379
           ERG     C+ D+
Sbjct: 784 ERGRISPQCQLDL 796


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 163/308 (52%), Gaps = 2/308 (0%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N LI   C+RG +  A  VL  M   +   P+++TY+ L+   CK   +R+A+EL + M 
Sbjct: 167 NPLIHALCERGRVADALVVLDGML-CRGCAPDVVTYNILLQAACKGRGYRQALELIDFMR 225

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           + +   P+ +TYNV+ID  CR G VD+A++++  + + GC PN  NY T++ GFC   + 
Sbjct: 226 A-EGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERW 284

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            +A E+ DEM      P+      +IN  CR G + +    L++M + GC A++VT+N +
Sbjct: 285 VDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAV 344

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G+C +G ++ AL +L  +   G   +  +Y  VL   C     E A EL+  M     
Sbjct: 345 ISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDR 404

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           LP  +T N ++   C+ G+   A      + E G  P S +++ ++  + +  K+  A E
Sbjct: 405 LPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALE 464

Query: 506 LLDELVIK 513
           LL+E+  K
Sbjct: 465 LLNEMANK 472



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 164/306 (53%), Gaps = 2/306 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  L+  +C+ G LE A  V+  M  + +   +   ++ LI  LC+ GR  +A+ + + M
Sbjct: 131 YGALVDGYCRAGLLEDARRVVGGMP-AHVQASSAYAHNPLIHALCERGRVADALVVLDGM 189

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + +    PD +TYN+L+   C+G    +A ++++FM+  GC PN   Y  +++  C+EG 
Sbjct: 190 LCRG-CAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGD 248

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A+E+ + + +   KP+T+ Y T++  FC   R  +A E+L EM    C  +  T N+
Sbjct: 249 VDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNV 308

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           I+  LCR+G +++    LEK+   G   N  +Y  V++  C++G ++ A+ELL  M   G
Sbjct: 309 IINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFG 368

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P   T N +L  LC A   EDA   +  + +    P++ ++  ++   C+   +L AF
Sbjct: 369 CKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAF 428

Query: 505 ELLDEL 510
           E+  ++
Sbjct: 429 EVFKQM 434



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 175/330 (53%), Gaps = 4/330 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P+    +  ++ +     VD A+  L  S      KPNT  +N ++K  C       A 
Sbjct: 230 EPNNVTYNVIIDAMCREGDVDQARELLN-SLPSRGCKPNTVNYNTVLKGFCSIERWVDAD 288

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+L EM +     PN  T + +I+ LC+ G  ++ + L+ E +SK     + +TYN +I 
Sbjct: 289 EILDEMVRENCP-PNEATLNVIINTLCRKGLLQK-VTLYLEKMSKHGCTANVVTYNAVIS 346

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C  G VD A +++  M++ GC P++  Y T++ G C   + ++A+E+  +M      P
Sbjct: 347 GMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLP 406

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   + T+I+ +C+ G + +A E+ K+M E+GC  +  T++ I+GGL + GK+E+AL +L
Sbjct: 407 DNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELL 466

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   G   +K  YR++     ++ ++E+ ++++  +   G  P     N +L+ LC+ 
Sbjct: 467 NEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRN 525

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           G  + A   L  +V  G  P+  ++ +L+E
Sbjct: 526 GKTDYAIDVLADMVSCGCMPDESTYIILIE 555



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 199/382 (52%), Gaps = 10/382 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+ + +  + G   NN TY  I+D + R    +    +L  +    CK +   +  ++
Sbjct: 217 ALELIDFMRAE-GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVL 275

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           K F  CS+ ER ++    +  + RE   P+   ++  +N L     +     +L+  ++H
Sbjct: 276 KGF--CSI-ERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKH 332

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
                N   +N +I   C++G ++SA E+L  M+ S    P+++TY+T++ GLC   R+ 
Sbjct: 333 -GCTANVVTYNAVISGMCEQGNVDSALELLSNMQ-SFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A EL  +M   D+ LPD  T+N +I  +C+ G + +A ++ + M   GCNPN   Y+T+
Sbjct: 391 DAEELMIKMSQNDR-LPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTI 449

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G  K GK+++A E+ +EM N     D + Y  L     +  +++E ++++ ++++ G 
Sbjct: 450 IGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGI 508

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
               V +N +L GLCR GK + A+ +L  +   G   ++++Y I++     +G  ++A E
Sbjct: 509 SPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARE 568

Query: 436 LLRLMLCRGFLPHYATSNELLV 457
           LL  +  R  L +    NE L+
Sbjct: 569 LLSRLCSRDVLSNSLIKNEALL 590



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 7/207 (3%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG--YTTLINCFCRAGRVDEAL 364
           P+V     L+   C+ G+  +A  V +        P+     Y  L++ +CRAG +++A 
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVVEA-----CGPEATAATYGALVDGYCRAGLLEDAR 148

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            ++  M      +     N ++  LC  G++ +AL +L+ +   G   +  +Y I+L  +
Sbjct: 149 RVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAA 208

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+     +A+EL+  M   G  P+  T N ++  +C+ G  + A   L  L   G KP +
Sbjct: 209 CKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNT 268

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
            ++  +++  C   + + A E+LDE+V
Sbjct: 269 VNYNTVLKGFCSIERWVDADEILDEMV 295


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 177/338 (52%), Gaps = 23/338 (6%)

Query: 197 RLKPNTCIFNILIKHHCKR--GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           R++ +  ++  LI   CK   G   +A ++L++M++ Q+  PNLI Y+T++ GLCK+G  
Sbjct: 154 RIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNI 213

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGG----------------KVDRAKKIME 298
            EA  L  +M+ +  I PD  TY+ LI G CR G                KVD A+++  
Sbjct: 214 NEARVLCSKMIVQG-IFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFN 272

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M   G   ++ NY  LMNG+C   K+ EA+++F  M     +PDTI YT L++ +C   
Sbjct: 273 VMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLID 332

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           +VDEA  L   M ERG   D+ ++NI++ G C+  ++ EA+ +LE ++   +  N  +Y 
Sbjct: 333 KVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYN 392

Query: 419 IVLNFSCQKGELEKAIELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG--L 475
            V++  C+ G +  A +L+  M  C    P   T N LL  LC+    E  AIA F   +
Sbjct: 393 SVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVE-KAIAFFKHLI 451

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            E  F P   S+ +L+   C+ R+L  A  L + +  K
Sbjct: 452 FERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFK 489



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 195/386 (50%), Gaps = 29/386 (7%)

Query: 147 ERVLEMFHKI---HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  + +FH++   HP+       K + T   +   +  +DL    ++Y      + P T 
Sbjct: 36  DDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDL-YTLMEYKG----VVPFTV 90

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            FNILI   C  G ++ AF V+ ++ K     PN++T++TL+ G C N +  +A+ +++E
Sbjct: 91  TFNILINCFCHMGQMDFAFSVMGKILKWGCR-PNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 264 MVSKDQILPDALTYNVLIDGFCRG--GKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNGFC 320
           MV++ +I  D + Y  LI+G C+   GK   A ++++ M+      PN+  Y T+++G C
Sbjct: 150 MVAR-RIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLC 208

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG----------------RVDEAL 364
           K+G + EA+ +  +M    + PD   Y++LI   CRAG                +VDEA 
Sbjct: 209 KDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAR 268

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           EL   M ERG + DI+ +NI++ G C   K+ EA  +   +   G   +  +Y I+++  
Sbjct: 269 ELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGY 328

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C   ++++A  L   M+ RG +P   + N L+   CK     +A   L  +      P  
Sbjct: 329 CLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNI 388

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
            ++  +V+ +C+   +L A++L+DE+
Sbjct: 389 ITYNSVVDGLCKSGGILDAWKLVDEM 414



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 217/461 (47%), Gaps = 43/461 (9%)

Query: 48  DTCVDARKRSRFISHGAAISLIKCEK--EPQCALEIFNTVSEQKGFNHNNATYATILDKL 105
           D  V  R R   + +G  I+ +   K  +P+ A+++   + E++    N   Y T++  L
Sbjct: 148 DEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGL 207

Query: 106 ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPS 165
            +         +  +M  +      GIF ++   F+  SL          I+ + R    
Sbjct: 208 CKDGNINEARVLCSKMIVQ------GIFPDI---FTYSSL----------IYGLCRAGQR 248

Query: 166 LKAISTCLNLLIESNQVDLAQNF----LKYSNQHLRLKPNTCIFNILIKHHC---KRGTL 218
            K +++ LN    +N+VD A+      ++   QH     +   +NIL+  +C   K G  
Sbjct: 249 -KEVTSLLNGFCLNNKVDEARELFNVMIERGEQH-----DIINYNILMNGYCLNNKVGEA 302

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
              F ++ E  +     P+ ITY+ L+ G C   +  EA  LF  M+ +  ++PD  +YN
Sbjct: 303 RKLFHMMVERGEQ----PDTITYTILMHGYCLIDKVDEARNLFHGMIERG-LVPDVWSYN 357

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           +LI G+C+  +V  A  ++E M      PN+  Y ++++G CK G + +A ++ DEM   
Sbjct: 358 ILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYC 417

Query: 339 LLKP-DTIGYTTLINCFCRAGRVDEALELLKEMK-ERGCKADIVTFNIILGGLCREGKIE 396
              P D   Y  L+   CR   V++A+   K +  ER    ++ ++NI++ G C+  +++
Sbjct: 418 CQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLD 477

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA+ +   + +  +  +  +Y I+L+      +L+KAI LL  ++ +G  P+  T N L+
Sbjct: 478 EAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILI 537

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             L K G  + A      L   G+ P+  ++  ++  +C+G
Sbjct: 538 NGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELCKG 576



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 170/355 (47%), Gaps = 56/355 (15%)

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK  +++ A  +   M       P+++ ++ ++  + K   +  AI+L+  M  K  ++P
Sbjct: 30  CKFDSIDDAVALFHRMVDMH-PLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKG-VVP 87

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
             +T+N+LI+ FC  G++D A  +M  +   GC PNV  +TTLM GFC   K+ +A  ++
Sbjct: 88  FTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIY 147

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRA--GRVDEALELLKEMKERG-CKADIVTFNIILGGL 389
           DEM    ++ D + Y TLIN  C++  G+   A++LL++M+ER   K +++ +N ++ GL
Sbjct: 148 DEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGL 207

Query: 390 CREGKIEEALGMLEKLWYDGIY------------------------------LNK----- 414
           C++G I EA  +  K+   GI+                              LN      
Sbjct: 208 CKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEA 267

Query: 415 ----------------ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
                            +Y I++N  C   ++ +A +L  +M+ RG  P   T   L+  
Sbjct: 268 RELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHG 327

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            C     ++A     G++E G  P+  S+ +L++  C+  ++  A  LL+++ +K
Sbjct: 328 YCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLK 382



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 148/271 (54%), Gaps = 11/271 (4%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           E+P     +  ++     ++VD A+N L +      L P+   +NILIK +CK   +  A
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARN-LFHGMIERGLVPDVWSYNILIKGYCKFERVGEA 372

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +L++M    +  PN+ITY++++DGLCK+G   +A +L +EM    Q  PD  TYN+L+
Sbjct: 373 MNLLEDMFLKNLV-PNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILL 431

Query: 282 DGFCRGGKVDRAKKIMEFMKN----NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           +  CR   ++  +K + F K+        PNV++Y  L++G CK  +L EA  +F+ M  
Sbjct: 432 ESLCR---IECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCF 488

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             L PD + Y  L++      ++D+A+ LL ++ ++G   ++ T+NI++ GL + G+ + 
Sbjct: 489 KNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKT 548

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           A  +   L   G + +  +Y  ++N  C+ G
Sbjct: 549 AQKISLYLSIRGYHPDVKTY--IINELCKGG 577


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 175/336 (52%), Gaps = 3/336 (0%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L E  +VD   N  K   +     P    + +++    + G    A  +  EM++     
Sbjct: 49  LCEVGRVDEGINIFKKMRED-DCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCE- 106

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN+ TY+ +I+ +CK  +  E   + +EMV K  ++P   TYN LIDG+C+ G V+ A++
Sbjct: 107 PNIHTYTVMINAMCKETKLEEGRRILDEMVEKG-LVPSVPTYNALIDGYCKEGMVEAAQE 165

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           I++ M +N CNPN   Y  L+ GFC++  +  A  +  +M    L P  + Y +LI+  C
Sbjct: 166 ILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQC 225

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G +D A  LL  M E G   D  T+++ +  LC++G+IEEA  +   L   GI  N+ 
Sbjct: 226 KIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  +++  C+ G+++ A  LL  ML    LP+ +T N L+  LCK    ++A + +  +
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           ++ G K    ++ +L+  + +     +A  +LD++V
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 211/418 (50%), Gaps = 11/418 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +FN +  +KG   N  +Y  ++  L    + +    + ++M  + C      +  ++
Sbjct: 23  AFSVFNMMP-KKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIV 81

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
                       + +F ++    RE+   P++   +  +N + +  +++  +  L    +
Sbjct: 82  HALFESGRRMEAINLFSEM----RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              L P+   +N LI  +CK G +E+A E+L ++  S    PN  TY+ LI G C+    
Sbjct: 138 K-GLVPSVPTYNALIDGYCKEGMVEAAQEIL-DLMHSNSCNPNERTYNELICGFCRKKNV 195

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A+ L  +M+ + ++ P  +TYN LI G C+ G +D A +++  M  NG  P+ + Y+ 
Sbjct: 196 HRAMALLSKML-ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            ++  CK+G+++EA  +F+ +K   +K + + YT LI+ +C+AG++D+A  LL  M    
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           C  +  T+N ++ GLC+E K++EAL ++E +   G+     +Y I++    ++G+ + A 
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
            +L  M+  G+ P        +   C  G  ++A   +  + E G  P++ ++ L+++
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 155/316 (49%), Gaps = 11/316 (3%)

Query: 208 LIKHHCKRGTL---------ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           ++  +CK G L          SAF V   M K      N ++Y+ LI GLC+ GR  E I
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCR-RNEVSYTNLIHGLCEVGRVDEGI 59

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            +F++M  +D   P   TY V++      G+   A  +   M+  GC PN+  YT ++N 
Sbjct: 60  NIFKKM-REDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINA 118

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKE KL+E + + DEM    L P    Y  LI+ +C+ G V+ A E+L  M    C  +
Sbjct: 119 MCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPN 178

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+N ++ G CR+  +  A+ +L K+    +  +  +Y  +++  C+ G L+ A  LL 
Sbjct: 179 ERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN 238

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           LM   G +P   T +  +  LCK G  E+A +    L E G K     +  L++  C+  
Sbjct: 239 LMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAG 298

Query: 499 KLLFAFELLDELVIKE 514
           K+  A  LLD ++ ++
Sbjct: 299 KMDDANSLLDRMLTED 314



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 193/386 (50%), Gaps = 11/386 (2%)

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTC 172
           +V   M  + C+ +E  + NL+         +  + +F K+    RE    P+++  +  
Sbjct: 25  SVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKM----REDDCYPTVRTYTVI 80

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           ++ L ES +   A N      +    +PN   + ++I   CK   LE    +L EM +  
Sbjct: 81  VHALFESGRRMEAINLFSEMRER-GCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +  P++ TY+ LIDG CK G    A E+ + M S +   P+  TYN LI GFCR   V R
Sbjct: 140 L-VPSVPTYNALIDGYCKEGMVEAAQEILDLMHS-NSCNPNERTYNELICGFCRKKNVHR 197

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A  ++  M  +   P+V  Y +L++G CK G L  A  + + M    + PD   Y+  I+
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GR++EA  L   +KE+G KA+ V +  ++ G C+ GK+++A  +L+++  +    
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           N ++Y  +++  C++ ++++A+ L+  M+ +G      T   L+V + K G  + A   L
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL 377

Query: 473 FGLVEMGFKPESDSWALLVELIC-RG 497
             +V  G++P+   +   +   C RG
Sbjct: 378 DQMVSSGYQPDVYIYTAFIHAFCTRG 403



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 167/315 (53%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           + N   +  LI   C+ G ++    + K+M++    YP + TY+ ++  L ++GR  EAI
Sbjct: 36  RRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDD-CYPTVRTYTVIVHALFESGRRMEAI 94

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            LF EM  +    P+  TY V+I+  C+  K++  ++I++ M   G  P+V  Y  L++G
Sbjct: 95  NLFSEMRERG-CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDG 153

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +CKEG ++ A+E+ D M +    P+   Y  LI  FCR   V  A+ LL +M E      
Sbjct: 154 YCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPS 213

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VT+N ++ G C+ G ++ A  +L  +  +G+  ++ +Y + ++  C+KG +E+A  L  
Sbjct: 214 VVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFN 273

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +  +G   +      L+   CKAG  +DA   L  ++     P S ++  L++ +C+ R
Sbjct: 274 SLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKER 333

Query: 499 KLLFAFELLDELVIK 513
           K+  A  L++ ++ K
Sbjct: 334 KVQEALLLMESMIQK 348



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 220/484 (45%), Gaps = 77/484 (15%)

Query: 79  LEIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TYET- 125
           +E  N  SE  ++G   N  TY  +++ + +  K E    +L +M          TY   
Sbjct: 91  MEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNAL 150

Query: 126 ----CKFHEGI------FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
               CK  EG+       L+LM H ++C+ +ER       I    R+K   +A++  L+ 
Sbjct: 151 IDGYCK--EGMVEAAQEILDLM-HSNSCNPNERTYNEL--ICGFCRKKNVHRAMAL-LSK 204

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           ++ES                 RL P+   +N LI   CK G L+SA+ +L  M ++ +  
Sbjct: 205 MLES-----------------RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGV-V 246

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+  TYS  ID LCK GR  EA  LF  +  K  I  + + Y  LIDG+C+ GK+D A  
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG-IKANEVIYTALIDGYCKAGKMDDANS 305

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M    C PN   Y  L++G CKE K+QEA  + + M    LK     YT LI    
Sbjct: 306 LLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAML 365

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G  D A  +L +M   G + D+  +   +   C  G I+EA  M+  ++  G+  +  
Sbjct: 366 KEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDAL 425

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK-------------- 461
           +Y +V++     G L  A ++L+ M   G  P + T + L+  L K              
Sbjct: 426 TYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCD 485

Query: 462 -------AGMAE-------DAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
                  A +A+       + A+ LF  ++E G  P  +++A L+  +C+  +L  A +L
Sbjct: 486 SIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKL 545

Query: 507 LDEL 510
            D +
Sbjct: 546 FDHM 549



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 203/502 (40%), Gaps = 99/502 (19%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG   +  TY  ++D   +    EA   +L  M   +C  +E  +  L+  F       
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R + +  K+   +R  PS+   ++ ++   +   +D A   L   N++  + P+   +++
Sbjct: 197 RAMALLSKMLE-SRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNEN-GVVPDQWTYSV 254

Query: 208 LIKHHCKRGTLESA---FEVLKE--MKKSQMSY--------------------------- 235
            I   CK+G +E A   F  LKE  +K +++ Y                           
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314

Query: 236 --PNLITYSTLIDGLCKNGRFREAIELFEEMVSK-------------------------- 267
             PN  TY+ LIDGLCK  + +EA+ L E M+ K                          
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374

Query: 268 ---DQIL-----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              DQ++     PD   Y   I  FC  G +  A+ +M  M   G  P+   YT +++ +
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI----------------------NCF--- 354
              G L  A +V   M +    P    Y+ LI                      N F   
Sbjct: 435 GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFAD 494

Query: 355 ----CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
                +  + + ALEL ++M E GC  +I T+  ++ GLC+ G++  A  + + +   G+
Sbjct: 495 VADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV 554

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             ++A Y  +LN  C+ G    A+ L+  M+  G LP   + N L   L + G  E A +
Sbjct: 555 SPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKV 614

Query: 471 ALFGLVEMGFKPESDSWALLVE 492
               L++ G+  +  +W +L++
Sbjct: 615 VFSNLLQCGYNDDEVAWKILID 636



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 173/407 (42%), Gaps = 38/407 (9%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           +FN++ E KG   N   Y  ++D   +  K +  +++L +M  E C  +   +  L+   
Sbjct: 271 LFNSLKE-KGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329

Query: 141 SNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL 198
                  +V E    +  + ++  K ++   +  +  +++    D A   L         
Sbjct: 330 CK---ERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS-GY 385

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+  I+   I   C RG ++ A +++  M +  +  P+ +TY+ +ID     G    A 
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV-MPDALTYTLVIDAYGGLGLLNPAF 444

Query: 259 ELFEEMVSKDQILPDALTYNVLID--------------GFC---------------RGGK 289
           ++ + M       P   TY+ LI                 C               +  K
Sbjct: 445 DVLKRMFDTG-CDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMK 503

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
            + A ++ E M  +GC+PN+  Y  L+ G CK G+L  A+++FD M    + P    Y +
Sbjct: 504 FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNS 563

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           L+NC C  G   +A+ L+  M E G    + + N++  GL  EG  E+A  +   L   G
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG 623

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
              ++ +++I+++   + G  +   ELL +M  RG   H  T   L+
Sbjct: 624 YNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 2/172 (1%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            E+A E+ ++M +   S PN+ TY+ LI GLCK GR   A +LF+ M ++  + P    Y
Sbjct: 504 FETALELFEKMLEHGCS-PNINTYAKLIIGLCKVGRLGVAQKLFDHM-NERGVSPSEAIY 561

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N L++  C  G    A +++  M  +G  P + +   L  G  +EG  ++AK VF  +  
Sbjct: 562 NSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQ 621

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
                D + +  LI+   + G  D   ELL  M+ RGC+    T+ +++ GL
Sbjct: 622 CGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 215/430 (50%), Gaps = 13/430 (3%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +   +  +L  L A  +  +A+D VLR+MT   C  +   +  L+K   + +  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----PN 201
           +  LE+   +     +  P + + +T +N   +   +D A     Y   H  L     PN
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-----YGTYHEMLDRGILPN 233

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N +I   CK   ++ A EVL  M K+ +  PN  TY++++ G C +G+ +EAI   
Sbjct: 234 VVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV-MPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M S D + PD +TYN L+D  C+ G+   A+K+ + M   G  P +  Y TL+ G+  
Sbjct: 293 KKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G L E   + D M    + P+   ++ LI  + + G+VD+A+ +  +M+++G   D VT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +  ++G LC+ G++E+A+   E++  + +      Y  +++  C   + +KA EL+  ML
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG        N ++   CK G   ++      +V +G KP   +++ L++  C   K+ 
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMD 531

Query: 502 FAFELLDELV 511
            A +LL  +V
Sbjct: 532 EATKLLASMV 541



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 199/406 (49%), Gaps = 10/406 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY +++D L +  +      +   MT    K     +  L++ ++       +
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT---KGAL 355

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
           +EM   +  + R    P+    S  +    +  +VD  Q  L +S    + L P+T  + 
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD--QAMLVFSKMRQQGLNPDTVTYG 413

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G +E A    ++M   ++S P  I Y++LI  LC   ++ +A EL  EM+ 
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I  D + +N +ID  C+ G+V  ++K+ + M   G  PN+  Y+TL++G+C  GK+ 
Sbjct: 473 RG-ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMD 531

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++   M +  +KPD + Y TLIN +C+  R+++AL L +EM+  G   DI+T+NIIL
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL +  +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + + +      
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
               T N ++  L K G  ++A      L   G  P+  +++L+ E
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 160/300 (53%), Gaps = 11/300 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN C + ILI   C  G L+  F  L  + K      + I ++ L+ GLC + R  +A
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 145

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTTL 315
           +++    +++   +P+  +YN+L+ G C   +   A ++++ M ++G  C P+V +YTT+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGF KEG L +A   + EM +  + P+ + Y ++I   C+A  +D+A+E+L  M + G 
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  T+N I+ G C  G+ +EA+G L+K+  DG+  +  +Y  ++++ C+ G   +A +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWALLV 491
           +   M  RG  P   T   LL      G    A + + GL+++    G  P    +++L+
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPNHYVFSILI 381



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 194/388 (50%), Gaps = 9/388 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F++++ ++G      TY T+L   A       +  +L  M       +  +F  L+
Sbjct: 323 ARKMFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL- 196
             ++     ++ + +F K+       P      T + +L +S +V+ A   ++Y  Q + 
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQ-QGLNPDTVTYGTVIGILCKSGRVEDA---MRYFEQMID 437

Query: 197 -RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            RL P   ++N LI   C     + A E++ EM    +   + I ++++ID  CK GR  
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVI 496

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+ +LF+ MV +  + P+ +TY+ LIDG+C  GK+D A K++  M + G  P+   Y TL
Sbjct: 497 ESEKLFDLMV-RIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+CK  ++++A  +F EM++  + PD I Y  ++    +  R   A EL   + E G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G  ++A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAG 463
           L   +   G +P   T + +   L + G
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 5/260 (1%)

Query: 257 AIELFEEMV--SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           A+  +  M     D++ P+  TY +LI   C  G++D     +  +   G   +   +T 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 315 LMNGFCKEGKLQEAKE-VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           L+ G C + +  +A + V   M      P+   Y  L+   C   R  EALELL+ M + 
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 374 G--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           G  C  D+V++  ++ G  +EG +++A G   ++   GI  N  +Y  ++   C+   ++
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMD 251

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           KA+E+L  M+  G +P+  T N ++   C +G  ++A   L  +   G +P+  ++  L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 492 ELICRGRKLLFAFELLDELV 511
           + +C+  +   A ++ D + 
Sbjct: 312 DYLCKNGRCTEARKMFDSMT 331



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG-IFLNL 136
           A+ +F+ +  Q+G N +  TY T++  L +  + E       QM  E  +   G I  N 
Sbjct: 393 AMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--RLSPGNIVYNS 449

Query: 137 MKHFSNCSLH------ERVLEMFHKIHPITREKPSLKAI--STCL-NLLIESNQV-DLAQ 186
           + H S C         E +LEM  +   I  +     +I  S C    +IES ++ DL  
Sbjct: 450 LIH-SLCIFDKWDKAKELILEMLDR--GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
                    + +KPN   ++ LI  +C  G ++ A ++L  M    M  P+ +TY+TLI+
Sbjct: 507 --------RIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK-PDCVTYNTLIN 557

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G CK  R  +A+ LF EM S   + PD +TYN+++ G  +  +   AK++   +  +G  
Sbjct: 558 GYCKISRMEDALVLFREMESSG-VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
             +  Y  +++G CK     EA  +F  +    L+ +T  +  +I    + GR DEA +L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              +   G   D+ T++++   L  +G +EE   +   +  +G   N      ++    Q
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736

Query: 427 KGELEKA 433
           +G++ +A
Sbjct: 737 RGDITRA 743


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M+ S +  P++ TYS LI+GLCK     +A
Sbjct: 162 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQ-PDVYTYSVLINGLCKESXMDDA 220

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 221 NELFDEMLVKG-LVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVY 279

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L +A  + DEM    LKPD   YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 280 GLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRL 339

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 340 DDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLL 399

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 400 KEMQRNGHVPXVVTYNVLM 418



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 126 GYPASLYFFNILMHRFCKDGDIRVAPLVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 184

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE  + +A E+FDEM    L P+ + +TTLI+
Sbjct: 185 GFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLID 244

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    DJ+T+N ++ GLC++G + +A G+++++   G+  
Sbjct: 245 GHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKP 304

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 305 DKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKML 364

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 365 REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 402



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 153/261 (58%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK + +   ++P+   +++LI   CK   ++ A
Sbjct: 163 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDA 220

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN L+
Sbjct: 221 NELFDEMLVKGLV-PNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-XLLPDJITYNTLV 278

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G +++A  +++ M   G  P+ F YTTL++G CKEG L  A E    M    ++
Sbjct: 279 YGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIR 338

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 339 LDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 398

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  +G      +Y +++N
Sbjct: 399 LKEMQRNGHVPXVVTYNVLMN 419



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + + +D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 198 QPDVYTYSVLINGLCKESXMDDANELF---DEMLVKGLVPNXVTFTTLIDGHCKNGRVDL 254

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+JITY+TL+ GLCK G   +A  L +EM  K  + PD  TY  L
Sbjct: 255 AMEIYKQML-SQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKG-LKPDKFTYTTL 312

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 313 IDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGL 372

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPDT  YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 373 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T I  LC +  F EA  L + +VS+                      D  +   
Sbjct: 7   TLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYVFSG 66

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E +                   G
Sbjct: 67  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 126

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A  VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 127 YPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 186

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M+  G + D+ T+++++ GLC+E  +++A  + +++   G+  N  ++  +++  
Sbjct: 187 RLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGH 246

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +  LP   T N L+  LCK G    A   +  +   G KP+ 
Sbjct: 247 CKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDK 306

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 307 FTYTTLIDGCCKEGDLDAAFE 327



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 125/299 (41%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 40  KGSAXAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVP-- 95

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E +           Y  L+ GF            ++E
Sbjct: 96  ---------------FDTCRKVLEHLMK-------LRYFKLVWGF------------YEE 121

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G 
Sbjct: 122 ILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGD 181

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++  ++ A EL   ML +G +P+  T   
Sbjct: 182 LDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTT 241

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK G  + A      ++     P+  ++  LV  +C+   L  A  L+DE+  K
Sbjct: 242 LIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXK 300


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 232/504 (46%), Gaps = 43/504 (8%)

Query: 49  TCVDARKRSRFISHGA-AISLIKCEKEPQCALEIFN-TVSEQKG---FNHNNATYATILD 103
           T V  R  + F++  A A S   C   P  A+ +FN   S  +G    +  + TYA ++D
Sbjct: 64  TPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMD 123

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK 163
              R  + E   A   Q+     +    I  +L+K F      +  L++     P     
Sbjct: 124 CCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCV 183

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL-KPNTCIFNILIKHHCKRGTLESAF 222
           P + + S  L  L +  +   A + L+   +   +  P+   +  +I    K G +  A 
Sbjct: 184 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKAC 243

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCK-------------------------------- 250
           ++ KEM +  +  P+L+TYS+++  LCK                                
Sbjct: 244 DLFKEMVQRGIP-PDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYG 302

Query: 251 ---NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
               G+++EA+ +F+EM  +  ILPD +T N+L+   C+ GK+  A+ + + M   G NP
Sbjct: 303 YSSTGQWKEAVRVFKEM-RRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 361

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +VF+Y  ++NG+  +G L +  ++FD M    + PD   ++ LI  +   G +D+A+ + 
Sbjct: 362 DVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIF 421

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM++ G K D+VT+  ++  LCR GK+++A+    ++   G+  +K +Y  ++   C  
Sbjct: 422 NEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 481

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G L KA EL+  ++  G        + ++  LCK G   DA       V +G  P++  +
Sbjct: 482 GSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVY 541

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
           ++L++  C   K+  A  + D +V
Sbjct: 542 SMLMDGYCLVGKMEKALRVFDAMV 565



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 218/481 (45%), Gaps = 67/481 (13%)

Query: 71  CE-KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT------- 122
           CE K    AL+I    + + G   +  +Y+ +L  L    K    D +LR M        
Sbjct: 161 CEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 220

Query: 123 -----YET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
                Y T   C F EG   ++ K    C L +   EM  +  P     P L   S+ ++
Sbjct: 221 PDVVAYTTVIDCFFKEG---DVNKA---CDLFK---EMVQRGIP-----PDLVTYSSVVH 266

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
            L ++  +  A+ FL+       L P+   +N LI  +   G  + A  V KEM++  + 
Sbjct: 267 ALCKARAMGKAEAFLRQMVNKGVL-PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI- 324

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSK--------------------------- 267
            P+++T + L+  LCK G+ +EA ++F+ M  K                           
Sbjct: 325 LPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTD 384

Query: 268 -------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
                  D I PD  T++VLI  +   G +D+A  I   M+++G  P+V  YTT++   C
Sbjct: 385 LFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALC 444

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           + GK+ +A E F++M +  + PD   Y  LI  FC  G + +A EL+ E+   G + DIV
Sbjct: 445 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIV 504

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            F+ I+  LC+ G+I +A  + +     G + +   Y ++++  C  G++EKA+ +   M
Sbjct: 505 FFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 564

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE-LICRGRK 499
           +  G  P+      L+   CK G  ++       +++ G KP +  + ++++ L   GR 
Sbjct: 565 VSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRT 624

Query: 500 L 500
           +
Sbjct: 625 V 625



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 205/447 (45%), Gaps = 89/447 (19%)

Query: 58  RFISHGAAI---------SLIKC---EKEPQCALEIFNTVSEQKGFNHNNATYATILDKL 105
           R ++ G A+         ++I C   E +   A ++F  +  Q+G   +  TY++++  L
Sbjct: 210 RMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMV-QRGIPPDLVTYSSVVHAL 268

Query: 106 ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI--HPITREK 163
            + +     +A LRQM  +        + NL+  +S+    +  + +F ++  H I    
Sbjct: 269 CKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL--- 325

Query: 164 PSLKAISTCLNLLIESNQVDLAQNF-----LKYSNQHL---------------------- 196
           P +  ++  +  L +  ++  A++      +K  N  +                      
Sbjct: 326 PDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDL 385

Query: 197 -------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
                   + P+   F++LIK +   G L+ A  +  EM+   +  P+++TY+T+I  LC
Sbjct: 386 FDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVK-PDVVTYTTVIAALC 444

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK-IMEFMKNN----- 303
           + G+  +A+E F +M+ +  + PD   Y+ LI GFC  G + +AK+ I+E M N      
Sbjct: 445 RIGKMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDI 503

Query: 304 -----------------------------GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                                        G +P+   Y+ LM+G+C  GK+++A  VFD 
Sbjct: 504 VFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M +  ++P+ + Y TL+N +C+ GR+DE L L +EM ++G K   + +NII+ GL   G+
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVL 421
              A     ++   GI +NK +Y IVL
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVL 650



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 196/377 (51%), Gaps = 11/377 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+T++  KG N +  +Y  +L+  A       +  +   M  +        F  L+
Sbjct: 347 ARDVFDTMA-MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLI 405

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQ 194
           K ++NC + ++ + +F+++  H +   KP +   +T +  L    ++D A + F +  +Q
Sbjct: 406 KAYANCGMLDKAMIIFNEMRDHGV---KPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ 462

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            +   P+   ++ LI+  C  G+L  A E++ E+  + M   +++ +S++I+ LCK GR 
Sbjct: 463 GV--APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRL-DIVFFSSIINNLCKLGRI 519

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  +F+  V+  Q  PDA+ Y++L+DG+C  GK+++A ++ + M + G  PNV  Y T
Sbjct: 520 MDAQNIFDLTVNVGQ-HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGT 578

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G++ E   +F EM    +KP TI Y  +I+    AGR   A     EM E G
Sbjct: 579 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESG 638

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +  T+NI+L G  +    +EA+ + ++L    + ++  +   ++    Q   +E+A 
Sbjct: 639 IAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 698

Query: 435 ELLRLMLCRGFLPHYAT 451
           +L   +   G +P   T
Sbjct: 699 DLFASISRSGLVPCVVT 715



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF    S+ Q    + P + TY +L+D   R  + + A      +   G   ++   
Sbjct: 94  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 153

Query: 313 TTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             L+ GFC+  +  EA ++           PD   Y+ L+   C  G+  +A +LL+ M 
Sbjct: 154 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 213

Query: 372 ERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           E G  C  D+V +  ++    +EG + +A  + +++   GI  +  +Y  V++  C+   
Sbjct: 214 EGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 273

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           + KA   LR M+ +G LP   T N L+      G  ++A      +      P+  +  +
Sbjct: 274 MGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNM 333

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A ++ D + +K
Sbjct: 334 LMGSLCKYGKIKEARDVFDTMAMK 357


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 165/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A ELFEEM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMEDANELFEEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+V  A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A    K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+++A E+F+EM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRV  A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G+LE A    + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 143/312 (45%), Gaps = 52/312 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVS-----------------KDQILPDALTYNV 279
            L +Y T+I  LC +    EA  L + +VS                 K   + D   ++ 
Sbjct: 12  TLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYVFSG 71

Query: 280 LI-----DGFCRGG--------------KVDRAKKIME-FMKNN---------------G 304
           LI      GF R                  D  +K++E  MK                 G
Sbjct: 72  LIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE  
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M+  G + D+ T+++++ GLC+E K+E+A  + E++  +G+  N  ++  +++  
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGH 251

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G +  A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 252 CKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 485 DSWALLVELICR 496
            ++  L++  C+
Sbjct: 312 ITYTTLIDGSCK 323



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 131/307 (42%), Gaps = 54/307 (17%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  J E K +Q+S  ++  +S LI    ++G  R+AIE +         L   
Sbjct: 45  KGSASAVFAXJLETKGTQIS--DIYVFSGLIIAYLESGFLRDAIECYR--------LTKE 94

Query: 275 LTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQ 326
             + V  D  CR       K+   K +  F + +   G   +++ +  LM+ F KEG+++
Sbjct: 95  HKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIR 153

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+ VFD +  +                                   G +  +V+FN ++
Sbjct: 154 LAQSVFDAITKW-----------------------------------GLRPSVVSFNTLM 178

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G  + G ++E   +   +   G+  +  +Y +++N  C++ ++E A EL   ML  G +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLV 238

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+  T   L+   CK G    A      ++     P+  ++  L+  +C+   L  A +L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298

Query: 507 LDELVIK 513
           +DE+ +K
Sbjct: 299 IDEMSMK 305


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 223/449 (49%), Gaps = 11/449 (2%)

Query: 12  CRFSSFSTSSSSLPWI-SPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIK 70
           C F +FS  S     + S L  IK N    D      D   ++R     +     +  I 
Sbjct: 30  CNFGAFSGGSDYRERLRSGLHSIKFN----DALTLFCDM-AESRPLPSIVDFSRLLVAIA 84

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
             K+ +  + +F  + E  G +H+  +++T++D   R  +     + L +M     +   
Sbjct: 85  KLKKYEAVISLFRHI-EILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSI 143

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
             F +L+  F + +  +  + +  +I  +  E P++   +T ++ L E+ QVD A + L 
Sbjct: 144 VTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYE-PNVVIYNTIIDSLCENRQVDTALDVLN 202

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           +  + + ++P+   +N LI      G    +  +L +M +  + +P++IT+S +ID   K
Sbjct: 203 HM-EKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGI-HPDVITFSAMIDVFGK 260

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G+  EA + ++EM+ +  + P+ +TYN LI+G C  G +D AKK++ FM + G  PN  
Sbjct: 261 EGQLLEAKKQYDEMIQR-SVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAV 319

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y TL+NG+CK  ++ +A ++   M +  +  DT  Y TL   +C+AG+ + A ++L  M
Sbjct: 320 TYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
              G   DI TFN++L GLC  GKIE+AL  LE L      +   +Y I++   C+  ++
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRL 459
           E A  L   +  +G  P   T   +++ L
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTMMIGL 468



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 218/429 (50%), Gaps = 5/429 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F  ++E +    +   ++ +L  +A+ KK+EAV ++ R +           F  L+
Sbjct: 57  ALTLFCDMAESRPLP-SIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLI 115

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F  CS     L    K+  +  E PS+    + +N     N++  A + +      L 
Sbjct: 116 DCFCRCSRLSLALSCLGKMMKLGFE-PSIVTFGSLVNGFCHVNRIQEAMSLVD-QIVGLG 173

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +PN  I+N +I   C+   +++A +VL  M+K  +  P++ITY++LI  L  +G++  +
Sbjct: 174 YEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIR-PDVITYNSLITRLFHSGKWGVS 232

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +  +M+ +  I PD +T++ +ID F + G++  AKK  + M     +PN+  Y +L+N
Sbjct: 233 ARILSDMM-RMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  G L EAK+V + M +    P+ + Y TL+N +C++ RVD+A+++L  M   G   
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDG 351

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+N +  G C+ G+   A  +L ++   G+  +  ++ ++L+  C+ G++EKA+  L
Sbjct: 352 DTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKL 411

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +     +    T N ++  +CKA   EDA      L   G  P+  ++  ++  + R 
Sbjct: 412 EDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRK 471

Query: 498 RKLLFAFEL 506
           R  L A EL
Sbjct: 472 RLWLEAHEL 480



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 195/382 (51%), Gaps = 6/382 (1%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           F  L+   +    +E V+ +F  I  I      L + ST ++     +++ LA + L   
Sbjct: 76  FSRLLVAIAKLKKYEAVISLFRHIE-ILGISHDLYSFSTLIDCFCRCSRLSLALSCLG-K 133

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKN 251
              L  +P+   F  L+   C    ++ A  ++ ++    + Y PN++ Y+T+ID LC+N
Sbjct: 134 MMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI--VGLGYEPNVVIYNTIIDSLCEN 191

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +   A+++   M  K  I PD +TYN LI      GK   + +I+  M   G +P+V  
Sbjct: 192 RQVDTALDVLNHM-EKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           ++ +++ F KEG+L EAK+ +DEM    + P+ + Y +LIN  C  G +DEA ++L  M 
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV 310

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
            +G   + VT+N ++ G C+  ++++A+ +L  + +DG+  +  +Y  +    CQ G+  
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFN 370

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A ++L  M+  G LP   T N LL  LC+ G  E A + L  L +        ++ +++
Sbjct: 371 AAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIII 430

Query: 492 ELICRGRKLLFAFELLDELVIK 513
           + +C+  K+  A+ L   L +K
Sbjct: 431 KGMCKANKVEDAWYLFCSLALK 452



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 156/311 (50%), Gaps = 2/311 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F+ LI   C+   L  A   L +M K     P+++T+ +L++G C   R +EA+ L +++
Sbjct: 111 FSTLIDCFCRCSRLSLALSCLGKMMKLGFE-PSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V      P+ + YN +ID  C   +VD A  ++  M+  G  P+V  Y +L+      GK
Sbjct: 170 VGLGY-EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGK 228

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
              +  +  +M    + PD I ++ +I+ F + G++ EA +   EM +R    +IVT+N 
Sbjct: 229 WGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNS 288

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC  G ++EA  +L  +   G + N  +Y  ++N  C+   ++ A+++L +M   G
Sbjct: 289 LINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDG 348

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                 T N L    C+AG    A   L  +V  G  P+  ++ +L++ +C   K+  A 
Sbjct: 349 VDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL 408

Query: 505 ELLDELVIKES 515
             L++L   E+
Sbjct: 409 VKLEDLQKSET 419



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 159/325 (48%), Gaps = 16/325 (4%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK---HFSNCSLH 146
           G+  N   Y TI+D L   ++ +    VL  M     +     + +L+    H     + 
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 147 ERVLE--MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTC 203
            R+L   M   IHP       +   S  +++  +  Q+  A+   +Y     R + PN  
Sbjct: 233 ARILSDMMRMGIHP------DVITFSAMIDVFGKEGQLLEAKK--QYDEMIQRSVDPNIV 284

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N LI   C  G L+ A +VL  M  S+  +PN +TY+TL++G CK+ R  +A+++   
Sbjct: 285 TYNSLINGLCIHGLLDEAKKVLNFMV-SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCV 343

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M S D +  D  TYN L  G+C+ G+ + A+K++  M + G  P+++ +  L++G C+ G
Sbjct: 344 M-SHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHG 402

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K+++A    ++++        I Y  +I   C+A +V++A  L   +  +G   D++T+ 
Sbjct: 403 KIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYT 462

Query: 384 IILGGLCREGKIEEALGMLEKLWYD 408
            ++ GL R+    EA  +  K+  D
Sbjct: 463 TMMIGLRRKRLWLEAHELYRKMKKD 487



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 109/205 (53%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ +++ L+    K  K +    +F  ++   +  D   ++TLI+CFCR  R+  AL  
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M + G +  IVTF  ++ G C   +I+EA+ +++++   G   N   Y  +++  C+
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
             +++ A+++L  M   G  P   T N L+ RL  +G    +A  L  ++ MG  P+  +
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           ++ ++++  +  +LL A +  DE++
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMI 275



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 138/290 (47%), Gaps = 36/290 (12%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +F +A+ LF +M ++ + LP  + ++ L+    +  K +    +   ++  G + +++++
Sbjct: 53  KFNDALTLFCDM-AESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSF 111

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           +TL++ FC+  +L  A     +M     +P  + + +L+N FC   R+ EA+ L+ ++  
Sbjct: 112 STLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVG 171

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY--------------- 417
            G + ++V +N I+  LC   +++ AL +L  +   GI  +  +Y               
Sbjct: 172 LGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGV 231

Query: 418 --RI------------VLNFSC------QKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
             RI            V+ FS       ++G+L +A +    M+ R   P+  T N L+ 
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
            LC  G+ ++A   L  +V  GF P + ++  LV   C+ +++  A ++L
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL 341



 Score = 46.2 bits (108), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 11/189 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC---S 144
            KGF  N  TY T+++   + K+ +    +L  M+++        +  L + +      +
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFN 370

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN-QHLRLKPNTC 203
             E+VL        +    P +   +  L+ L E  +++ A   +K  + Q         
Sbjct: 371 AAEKVLARMVSCGVL----PDIYTFNMLLDGLCEHGKIEKA--LVKLEDLQKSETVVGII 424

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +NI+IK  CK   +E A+ +   +    +S P++ITY+T++ GL +   + EA EL+ +
Sbjct: 425 TYNIIIKGMCKANKVEDAWYLFCSLALKGVS-PDVITYTTMMIGLRRKRLWLEAHELYRK 483

Query: 264 MVSKDQILP 272
           M   D ++P
Sbjct: 484 MKKDDGLMP 492


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1114

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 13/384 (3%)

Query: 113  AVDAVLRQMTYETCKFHEGIFLNLMKH---FSNCSLHERVLEMFHKIHPITREKPSLKAI 169
            AV    R +    C+  + I + ++++    +N S    + E F K   +   +P L   
Sbjct: 734  AVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGV---QPKLPTY 790

Query: 170  STCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +  +  L+E++ +++AQ+ FL+  N      P+   +N L+  + K G ++  FE+ KEM
Sbjct: 791  NLLIGGLLEADMIEIAQDVFLQVKNTGC--IPDVATYNFLLDAYGKSGKIDELFEIYKEM 848

Query: 229  KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
               +   PN IT++ +I GL K G   +A++L+ +++S     P A TY  LIDG  + G
Sbjct: 849  SAHECE-PNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 907

Query: 289  KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            ++  AK++ E M + GC PN   Y  L+NGF K G+   A  +F  M    ++PD   Y+
Sbjct: 908  RLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 967

Query: 349  TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
             L++C C  GRVDE L   +E+KE G   D+V +N+I+ GL +  ++EEAL +  ++   
Sbjct: 968  VLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKS 1027

Query: 409  -GIYLNKASYR-IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             GI  +  +Y  ++LN     G +E+A ++   +   G  P+  T N L+     +G  E
Sbjct: 1028 RGITPDLYTYNSLILNLGIA-GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1086

Query: 467  DAAIALFGLVEMGFKPESDSWALL 490
             A      +V  GF P + ++  L
Sbjct: 1087 HAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 191/405 (47%), Gaps = 4/405 (0%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N  T+   +  L R  K      +L++M  E C      +  L+         
Sbjct: 252 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 311

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +   E+F K+    R KP      T L+   ++  +D    F     +   + P+   F 
Sbjct: 312 DCAKEVFAKMK-TGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHV-PDVVTFT 369

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           IL+   CK G    AF  L  M+  Q   PNL TY+TLI GL +  R  +A+E+F+ M S
Sbjct: 370 ILVDALCKAGNFGEAFAKLDVMR-DQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMES 428

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              + P A TY V ID + + G    A +  E MK  G  PN+      +    K G+ +
Sbjct: 429 L-GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 487

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EAK++F  +K+  L PD++ Y  ++ C+ + G +DEA++LL EM E  C+ D++  N ++
Sbjct: 488 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLI 547

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             L +  +++EA  M  ++    +     +Y  +L    + G++++AIEL   M+ +G  
Sbjct: 548 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 607

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           P+  T N L   LCK      A   LF +++MG  P+  ++  ++
Sbjct: 608 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 652



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 199/424 (46%), Gaps = 4/424 (0%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF  N  +Y  ++  L + +       V R+M  +  +     + +LM         E V
Sbjct: 185 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESV 244

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           + +  ++  +   KP++   + C+ +L  + +++ A   LK  +      P+   + +LI
Sbjct: 245 MGLLKEMETLGL-KPNVYTFTICIRVLGRAGKINEAYEILKRMDDE-GCGPDVVTYTVLI 302

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              C    L+ A EV  +MK  +   P+ +TY TL+D    N       + + EM  KD 
Sbjct: 303 DALCTARKLDCAKEVFAKMKTGRHK-PDRVTYITLLDRFSDNRDLDSVNQFWSEM-EKDG 360

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            +PD +T+ +L+D  C+ G    A   ++ M++ G  PN+  Y TL+ G  +  +L +A 
Sbjct: 361 HVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 420

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           E+FD M++  +KP    Y   I+ + ++G    ALE  ++MK +G   +IV  N  L  L
Sbjct: 421 EIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 480

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            + G+  EA  +   L   G+  +  +Y +++    + GE+++AI+LL  M+     P  
Sbjct: 481 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDV 540

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
              N L+  L KA   ++A      + EM  KP   ++  L+  + +  K+  A EL + 
Sbjct: 541 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 600

Query: 510 LVIK 513
           +V K
Sbjct: 601 MVQK 604



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 209/415 (50%), Gaps = 18/415 (4%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNH--NNATYATILDKLARYKKFEAVDAV 117
           +++   I  +   ++  CA E+F   ++ K   H  +  TY T+LD+ +  +  ++V+  
Sbjct: 296 VTYTVLIDALCTARKLDCAKEVF---AKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQF 352

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLN 174
             +M  +        F  L+             E F K+  + R++   P+L   +T + 
Sbjct: 353 WSEMEKDGHVPDVVTFTILVDALCKAG---NFGEAFAKLD-VMRDQGILPNLHTYNTLIC 408

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
            L+  +++D A      + + L +KP    + + I ++ K G   SA E  ++MK   ++
Sbjct: 409 GLLRVHRLDDALEIFD-NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 467

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRA 293
            PN++  +  +  L K GR REA ++F  +  KD  ++PD++TYN+++  + + G++D A
Sbjct: 468 -PNIVACNASLYSLAKAGRDREAKQIFYGL--KDIGLVPDSVTYNMMMKCYSKVGEIDEA 524

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
            K++  M  N C P+V    +L+N   K  ++ EA ++F  MK   LKP  + Y TL+  
Sbjct: 525 IKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 584

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
             + G++ EA+EL + M ++GC  + +TFN +   LC+  ++  AL ML K+   G   +
Sbjct: 585 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 644

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             +Y  ++    + G++++A+     M  +   P + T   LL  + KAG+ EDA
Sbjct: 645 VFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDA 698



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 185/392 (47%), Gaps = 45/392 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    +T  + L ++++V LA   L +    +   P+   +N +I    K G ++ A  
Sbjct: 608 PNTITFNTLFDCLCKNDEVTLALKML-FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 666

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK--DQ------------ 269
              +MKK  + YP+ +T  TL+ G+ K G   +A ++    +    DQ            
Sbjct: 667 FFHQMKK--LVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGS 724

Query: 270 ILPDALTYN-------VLIDGFCRGG---------------KVDRAKKIME-FMKNNGCN 306
           IL +A   N       ++ +G CR G                   A+ + E F K+ G  
Sbjct: 725 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQ 784

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  Y  L+ G  +   ++ A++VF ++KN    PD   Y  L++ + ++G++DE  E+
Sbjct: 785 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-SYRIVLNFSC 425
            KEM    C+ + +T NI++ GL + G +++AL +   L  D  +   A +Y  +++   
Sbjct: 845 YKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 904

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPES 484
           + G L +A +L   M   G  P+ A  N L+    KAG A DAA ALF  +V+ G +P+ 
Sbjct: 905 KSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA-DAACALFKRMVKEGVRPDL 963

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIKESG 516
            ++++LV+ +C   ++        EL  KESG
Sbjct: 964 KTYSVLVDCLCMVGRVDEGLHYFREL--KESG 993



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 162/346 (46%), Gaps = 6/346 (1%)

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLR---LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           TC N ++E+ +VD     + Y    ++   +K +T  +  + K    +G L  A   L++
Sbjct: 122 TC-NYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRK 180

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M++      N  +Y+ LI  L K+    EA+E++  M+  D   P   TY+ L+ G  + 
Sbjct: 181 MREFGFVL-NAYSYNGLIHLLLKSRFCTEAMEVYRRMI-LDGFRPSLQTYSSLMVGLGKR 238

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
             ++    +++ M+  G  PNV+ +T  +    + GK+ EA E+   M +    PD + Y
Sbjct: 239 RDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 298

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T LI+  C A ++D A E+  +MK    K D VT+  +L        ++       ++  
Sbjct: 299 TVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEK 358

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
           DG   +  ++ I+++  C+ G   +A   L +M  +G LP+  T N L+  L +    +D
Sbjct: 359 DGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 418

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           A      +  +G KP + ++ + ++   +    + A E  +++  K
Sbjct: 419 ALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 464



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 38/293 (12%)

Query: 60   ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
            I+H   IS +        AL+++  +   + F+    TY  ++D L++  +      +  
Sbjct: 858  ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 917

Query: 120  QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
             M+   C+              NC+++  ++  F K                       +
Sbjct: 918  GMSDYGCR-------------PNCAIYNILINGFGK-----------------------A 941

Query: 180  NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
             + D A    K   +   ++P+   +++L+   C  G ++      +E+K+S ++ P+++
Sbjct: 942  GEADAACALFKRMVKE-GVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLN-PDVV 999

Query: 240  TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
             Y+ +I+GL K  R  EA+ LF EM     I PD  TYN LI      G V+ A KI   
Sbjct: 1000 CYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1059

Query: 300  MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            ++  G  PNVF +  L+ G+   GK + A  V+  M      P+T  Y  L N
Sbjct: 1060 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 2/241 (0%)

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+ +     ++    T N +++     GK++    + + M+      +   Y T+     
Sbjct: 107 FKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLS 166

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +G L++A     +M+ F    +   Y  LI+   ++    EA+E+ + M   G +  + 
Sbjct: 167 VKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQ 226

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++ GL +   IE  +G+L+++   G+  N  ++ I +    + G++ +A E+L+ M
Sbjct: 227 TYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 286

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRK 499
              G  P   T   L+  LC A    D A  +F  ++ G  KP+  ++  L++     R 
Sbjct: 287 DDEGCGPDVVTYTVLIDALCTA-RKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRD 345

Query: 500 L 500
           L
Sbjct: 346 L 346


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 211/433 (48%), Gaps = 5/433 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++FN  +E    +     +  ++D L    +FE  + V +++  + C+     +  L+
Sbjct: 49  AFDLFNQ-AESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLI 107

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           ++F      +  +EMF ++  I   +P        +N L ++ +V  A++F     +   
Sbjct: 108 RYFGRSGQLDSAMEMFREMK-IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLER-G 165

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N+L+    K G L+ A  +  EMK+     P+++TY+ L+D LC  GR   A
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ-PSVVTYNILLDALCSAGRVGAA 224

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF +M   D   PD+ TY+ L++G  + G+V+ A K+   M + G   ++ NY +L+ 
Sbjct: 225 RKLFHKMTG-DGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLA 283

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              K G +    ++  EM      PD   + T+++   +A + D A E+   M E GCK 
Sbjct: 284 TLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D++++NI++    R G   +A  MLE++   G      +Y  ++++    G++++A  +L
Sbjct: 344 DLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVL 403

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P   T N L+  L K G  + AA     + + G +P++ S+A+ ++ +   
Sbjct: 404 EEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFD 463

Query: 498 RKLLFAFELLDEL 510
            +L  A  L  ++
Sbjct: 464 DRLDEALVLFKDM 476



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 211/406 (51%), Gaps = 4/406 (0%)

Query: 105 LARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKP 164
           LA +   + ++ +L++M  E         + L+  +   +      ++F++        P
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACS-P 63

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           ++ A +  +++L+ S + + A+   K   Q    + +   +N+LI++  + G L+SA E+
Sbjct: 64  TVHAFTKLIDILVNSGEFERAELVYKKLVQK-GCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
            +EMK  + S P+  TY  L++ L K GR +EA   F+ M+ +  + P+  TYN+L+D F
Sbjct: 123 FREMK-IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG-LTPNIPTYNLLMDAF 180

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
            + G++D A  +   MK  G  P+V  Y  L++  C  G++  A+++F +M      PD+
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             Y+TL+N   ++GRV+EA ++ +EM +RG   D+V +N +L  L + G ++    ++++
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G + +  S+  +++   +  + + A E+   M+  G  P   + N L+    + G 
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGD 360

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           A  A   L  +VE GF PE+ ++  L+  +    ++  AF +L+E+
Sbjct: 361 AAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 6/319 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+PNT +   LI  + +      AF++  + +    S P +  ++ LID L  +G F  A
Sbjct: 28  LRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACS-PTVHAFTKLIDILVNSGEFERA 84

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +++++V K   L D   YNVLI  F R G++D A ++   MK  G  P+ + Y  L+N
Sbjct: 85  ELVYKKLVQKGCQL-DRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVN 143

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              K G++QEA+  FD M    L P+   Y  L++ F + G++D AL L  EMK RG + 
Sbjct: 144 ALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQP 203

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT+NI+L  LC  G++  A  +  K+  DG   +  +Y  ++N   + G +E+A ++ 
Sbjct: 204 SVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVF 263

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R M+ RG        N LL  L KAG  +     +  +   GF P++ S+  +++ + + 
Sbjct: 264 REMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKA 323

Query: 498 RKLLFAFELLDELVIKESG 516
            K   A E+   +V  ESG
Sbjct: 324 NKPDAAREVFARMV--ESG 340



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 162/322 (50%), Gaps = 10/322 (3%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           P    F  LI      G  E A  V K++  K  Q+   +   Y+ LI    ++G+   A
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQL---DRFAYNVLIRYFGRSGQLDSA 119

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +E+F EM  K    PD  TY  L++   + G+V  A+   + M   G  PN+  Y  LM+
Sbjct: 120 MEMFREMKIKGS-EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD 178

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            F K G+L  A  +F EMK    +P  + Y  L++  C AGRV  A +L  +M   GC  
Sbjct: 179 AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T++ ++ GL + G++EEA  +  ++   G+ ++  +Y  +L    + G +++  +L+
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLM 298

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICR 496
           + M  +GF P   + N ++  L KA    DAA  +F  +VE G KP+  S+ +L++   R
Sbjct: 299 KEMSRKGFHPDAFSFNTIMDALGKAN-KPDAAREVFARMVESGCKPDLISYNILIDSYAR 357

Query: 497 GRKLLFAFELLDELVIKESGTI 518
                 A ++L+E+V  E+G I
Sbjct: 358 FGDAAQARQMLEEMV--EAGFI 377



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 188/379 (49%), Gaps = 11/379 (2%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           ++G  ++ +      Q A   F+ + E +G   N  TY  ++D   +  + +    +  +
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLE-RGLTPNIPTYNLLMDAFRKVGQLDMALGLFAE 195

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIE 178
           M     +     +  L+    +        ++FHK+   T +   P     ST +N L +
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM---TGDGCSPDSYTYSTLVNGLGK 252

Query: 179 SNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           S +V+ A   F +  ++ + +  +   +N L+    K G ++  ++++KEM +    +P+
Sbjct: 253 SGRVEEAHKVFREMVDRGVAV--DLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF-HPD 309

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
             +++T++D L K  +   A E+F  MV +    PD ++YN+LID + R G   +A++++
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMV-ESGCKPDLISYNILIDSYARFGDAAQARQML 368

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           E M   G  P    Y +L++    +G++ EA  V +EM+    +PD + Y  L++   + 
Sbjct: 369 EEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKR 428

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G    A  L ++MK++G + D +++ + + GL  + +++EAL + + +   G  ++KA Y
Sbjct: 429 GENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMY 488

Query: 418 RIVLNFSCQKGELEKAIEL 436
           RI++  + + G+ E   +L
Sbjct: 489 RILIRAAHRAGDTELEAQL 507



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 8/282 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + ++ TY+T+++ L +  + E    V R+M           + +L+   +     +RV
Sbjct: 235 GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRV 294

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            ++  ++   +R+   P   + +T ++ L ++N+ D A+       +    KP+   +NI
Sbjct: 295 WKLMKEM---SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES-GCKPDLISYNI 350

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  + + G    A ++L+EM ++    P   TY++LI  L  +G+  EA  + EEM + 
Sbjct: 351 LIDSYARFGDAAQARQMLEEMVEAGF-IPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               PD +TYN L+D   + G+  RA ++ + MK+ G  P+  +Y   ++G   + +L E
Sbjct: 410 G-CRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDE 468

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           A  +F +MK      D   Y  LI    RAG  +   +L  E
Sbjct: 469 ALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 215/430 (50%), Gaps = 14/430 (3%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF     T+  +L  L A  +  +A+D VLR+MT  +C         L+K   + +  
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174

Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH----LRLKP 200
           +  LE+ H +         P + + +T +N   +    D A     YS  H     R+ P
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA-----YSTYHEMLDRRISP 229

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   ++ +I   CK   ++ A EVL  M K+ +  PN +TY++++ G C + + +EAI  
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV-MPNCMTYNSILHGYCSSEQPKEAIGF 288

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M S D + PD +TYN L+D  C+ G+   A+KI + M   G  P++  Y TL+ G+ 
Sbjct: 289 LKKMRS-DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +G L E   + D M    + PD   +  LI  + +  +VDEA+ +  +M++ G   ++V
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+  ++G LC+ G +++A+   E++  +G+  N   Y  +++  C   + +KA EL+  M
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L RG   +    N ++   CK G   ++      +V +G KP   +++ L++  C   K+
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 501 LFAFELLDEL 510
             A +LL  +
Sbjct: 528 DEATKLLSSM 537



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 8/405 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY +++D L +  +      +   MT    +     +  L++ ++       +
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT---KGAL 352

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +EM   +  + R    P     +  +    +  +VD A        QH  L PN   +  
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQH-GLNPNVVTYGA 411

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK G+++ A    ++M    ++ PN+I Y++LI  LC   ++ +A EL  EM+ +
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLT-PNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I  + + +N +I   C+ G+V  ++K+ + M   G  PNV  Y+TL++G+C  GK+ E
Sbjct: 471 G-ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++   M +  +KPD + Y TLIN +CR  R+D+AL L KEM   G   +I+T+NIIL 
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL    +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + + +       
Sbjct: 590 GLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
              T N ++  L K G  ++A      L   G  P+  +++L+ E
Sbjct: 650 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 694



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 167/314 (53%), Gaps = 3/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           P+     IL+K  C     + A E+L  M   +   S P++++Y+T+I+G  K G   +A
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              + EM+ + +I PD +TY+ +I   C+G  +D+A +++  M  NG  PN   Y ++++
Sbjct: 216 YSTYHEMLDR-RISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C   + +EA     +M++  ++PD + Y +L++  C+ GR  EA ++   M +RG + 
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI T+  +L G   +G + E   +L+ +  +GI+ +   + I++    ++ ++++A+ + 
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P+  T   ++  LCK+G  +DA +    +++ G  P    +  L+  +C  
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIF 454

Query: 498 RKLLFAFELLDELV 511
            K   A EL+ E++
Sbjct: 455 DKWDKAEELILEML 468



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 191/390 (48%), Gaps = 13/390 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +IF++++ ++G   + ATY T+L   A       + A+L  M          +F  L+
Sbjct: 320 ARKIFDSMT-KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             ++     +  + +F K+  H +    P++      + +L +S  VD A   + Y  Q 
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGL---NPNVVTYGAVIGILCKSGSVDDA---MLYFEQM 432

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   L PN  ++  LI   C     + A E++ EM    +   N I ++++I   CK GR
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL-NTIFFNSIIHSHCKEGR 491

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             E+ +LF+ MV +  + P+ +TY+ LIDG+C  GK+D A K++  M + G  P+   Y 
Sbjct: 492 VIESEKLFDLMV-RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+NG+C+  ++ +A  +F EM +  + P+ I Y  ++       R   A EL   + + 
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G  ++A
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 670

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +L   +   G +P   T + +   L + G
Sbjct: 671 KDLFAALSANGLVPDVRTYSLMAENLIEQG 700



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 39/282 (13%)

Query: 269 QILPDALTYNVLIDGFCRGGKVD--------------------------------RAKKI 296
           ++ P   TY +LI   CR G++D                                R    
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 297 MEF----MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYTT 349
           M+     M    C P+VF+ T L+ G C E + QEA E+   M   +     PD + YTT
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +IN F + G  D+A     EM +R    D+VT++ I+  LC+   +++A+ +L  +  +G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N  +Y  +L+  C   + ++AI  L+ M   G  P   T N L+  LCK G + +A 
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                + + G +P+  ++  L++       L+    LLD +V
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 122/243 (50%), Gaps = 2/243 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KPN   ++ LI  +C  G ++ A ++L  M    M  P+ +TY+TLI+G C+  R  +A
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK-PDCVTYNTLINGYCRVSRMDDA 565

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF+EMVS   + P+ +TYN+++ G     +   AK++   +  +G    +  Y  +++
Sbjct: 566 LALFKEMVSSG-VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILH 624

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK     EA  +F  +    L+ +T  +  +I    + GR DEA +L   +   G   
Sbjct: 625 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 684

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ T++++   L  +G +EE   +   +  +G   N      ++    Q+G++ +A   L
Sbjct: 685 DVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL 744

Query: 438 RLM 440
            ++
Sbjct: 745 SMI 747


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 192/352 (54%), Gaps = 5/352 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +P++    T +N L +  Q+  A N   +S    + + P+   +N LI   C     +  
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNL--FSEMIAKGISPDIFTYNSLIHALCNLCEWKHV 215

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +L EM KS++  PN+++ + ++D LCK G+  EA ++ + M+ +  + PD +TY  L+
Sbjct: 216 TTLLNEMVKSKI-MPNVVSLNIVVDALCKEGKVTEAHDVVDMMI-QGGVEPDVVTYAALM 273

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG C   ++D A K+ + M  NGC  NV +Y TL+NG+CK  ++ +A  +F+EM    L 
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+T+ Y+TLI+  C  GR+ +A+ L  EM   G   ++VT++I+L  LC+  ++ EA+ +
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L+ +    +  +   Y I ++  C+ G+LE A +L   +  RG  P   T N ++  LCK
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G+ ++A+     + E G      ++  + + + +  K   A +LL+E++ +
Sbjct: 454 RGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 208/417 (49%), Gaps = 40/417 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ +  + GF  N  TY T+++ L + ++      +  +M        +GI  ++ 
Sbjct: 145 ALDVFDKMVGE-GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEM------IAKGISPDIF 197

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
            + S          + H +  +       K ++T LN +++S                 +
Sbjct: 198 TYNS----------LIHALCNLCE----WKHVTTLLNEMVKS-----------------K 226

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN    NI++   CK G +  A +V+  M +  +  P+++TY+ L+DG C      EA
Sbjct: 227 IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVE-PDVVTYAALMDGHCLRSEMDEA 285

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +++F+ MV ++  + + ++YN LI+G+C+  ++D+A  + E M      PN   Y+TL++
Sbjct: 286 VKVFDMMV-RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIH 344

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  G+LQ+A  +F+EM      P+ + Y+ L++  C+  R+ EA+ LLK ++      
Sbjct: 345 GLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDP 404

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+  +NI + G+CR G +E A  +   L   G+  +  ++ I++   C++G L++A +L 
Sbjct: 405 DVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLF 464

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           R M   G L +  T N +   L +      A   L  ++  GF  +  + ALLV+++
Sbjct: 465 REMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 137/276 (49%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++ T + +I+  C   R   A+ +  +++      PD  T+  L+ G C  GK+  A  
Sbjct: 89  PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGH-QPDTATFTTLVRGLCVVGKIGEALD 147

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M   G  PNV  Y TLMNG CK+ +L EA  +F EM    + PD   Y +LI+  C
Sbjct: 148 VFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALC 207

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
                     LL EM +     ++V+ NI++  LC+EGK+ EA  +++ +   G+  +  
Sbjct: 208 NLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVV 267

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C + E+++A+++  +M+  G + +  + N L+   CK    + A      +
Sbjct: 268 TYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEM 327

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                 P + +++ L+  +C   +L  A  L +E+V
Sbjct: 328 CRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMV 363



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 81/187 (43%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A   F  M +    P    +  L+    +       L L K+M   G   D+ T  I
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   +++ AL +L K+   G   + A++  ++   C  G++ +A+++   M+  G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           F P+  T   L+  LCK     +A      ++  G  P+  ++  L+  +C   +     
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 505 ELLDELV 511
            LL+E+V
Sbjct: 217 TLLNEMV 223



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 67/154 (43%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +D+AL     M        I  F  +L  + +       L + +K+   GI  +  +  I
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V+N  C    ++ A+ +L  +L  G  P  AT   L+  LC  G   +A      +V  G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           F+P   ++  L+  +C+ R+L  A  L  E++ K
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAK 190


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/518 (23%), Positives = 235/518 (45%), Gaps = 72/518 (13%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++++ + + + AL+ F     Q  + H+   Y ++L+ L++ K  +    VL  M     
Sbjct: 182 AVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGI 241

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
                 FL +M  +S        L++   +     E P+L   +T +++ + +N+++ A 
Sbjct: 242 YRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVE-PNLLICNTTIDVFVRANRLEKAL 300

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHH---------------------------------- 212
            FL+   Q + + PN   +N +I+ +                                  
Sbjct: 301 RFLE-RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGY 359

Query: 213 -CKRGTLESAFEVLKEMKK------SQMSYPNLI-------------------------- 239
            CK   +    +++K+M K       Q++Y  LI                          
Sbjct: 360 LCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRI 419

Query: 240 ---TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
               YS ++  LCK GR  EA +L  EM+SK    PD +TY  +++GFCR G+VD+AKK+
Sbjct: 420 DKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 479

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           ++ M  +G  PN  +YT L+NG C+ GK  EA+E+ +  +     P++I Y+ L++   +
Sbjct: 480 LQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRK 539

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++ EA ++++EM  +G     V  N++L  LCR+G+  EA   +E+    G  +N  +
Sbjct: 540 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 599

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           +  V++  CQ  EL+ A+ +L  M          T   L+  L K G   +A   +  ++
Sbjct: 600 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKML 659

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             G  P   ++  ++   C+  K+     +L+++++++
Sbjct: 660 HKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQ 697



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 193/455 (42%), Gaps = 59/455 (12%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF----HEGIFLN 135
           ++   ++++ G   +  TY T++  L ++   +     L+    +  +     +  I   
Sbjct: 371 DLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHA 430

Query: 136 LMKHFSNCSLHERVLEMFHKIH-PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           L K        + + EM  K H P     P +   +  +N      +VD A+  L+  + 
Sbjct: 431 LCKEGRMSEAKDLINEMLSKGHCP-----PDVVTYTAVVNGFCRLGEVDKAKKLLQIMHT 485

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H   KPNT  +  L+   C+ G    A E++  M + Q   PN ITYS L+ GL K G+ 
Sbjct: 486 H-GYKPNTVSYTALLNGLCRTGKSLEAREMMN-MSEEQWWSPNSITYSVLMHGLRKEGKL 543

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA ++  EMV K    P  +  N+L+   CR G+   A+K ME   N GC  NV N+TT
Sbjct: 544 SEACDVVREMVLKG-FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 602

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           +++GFC+  +L  A  V D+M       D   YTTL++   + GR+ EA EL+K+M  +G
Sbjct: 603 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKG 662

Query: 375 CKADIVTF---------------------------------NIILGGLCREGKIEEALGM 401
                VT+                                 N ++  LC  GK+EEA  +
Sbjct: 663 IDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKL 722

Query: 402 LEKLWYDGIYLNKASYRIVLN-FSCQKGELEKAIELLRL-----MLCRGFLPHYATSNEL 455
           L K+      L  AS       ++  +G L+  + LL       M  R  +P      +L
Sbjct: 723 LGKV------LRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKL 776

Query: 456 LVRLCKAGMAEDAAIAL-FGLVEMGFKPESDSWAL 489
             RL   G   D  + L F LV    +  S++  L
Sbjct: 777 SKRLVVEGAGNDNNMLLYFSLVSDNLQIPSEATRL 811


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 216/446 (48%), Gaps = 43/446 (9%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+L  L   KK+E  + ++ +M    C  +E  F   ++ F    L +R +++  ++
Sbjct: 192 TYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM 251

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS---------NQHLR---------- 197
            P     P +   ST +N   E   VD A + L            N  L+          
Sbjct: 252 -PRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWED 310

Query: 198 ------------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
                         PN   F++LI   C+   ++SA EVL++M+K     P+ + Y+ +I
Sbjct: 311 IGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE-PDTVNYNIII 369

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           + L + GR  +A+ L   MV K    PDAL +N ++ GFCR  +   A +++  M  + C
Sbjct: 370 NSLSERGRVDDALRLLNSMVCK----PDALGFNAVLKGFCRAERWHDASELIAQMFRDDC 425

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
                 +  L++  C+ G +  A +VF++M  +   PD + Y++L+N F   G V+ A++
Sbjct: 426 PLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ 485

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L + M    CK DI ++N +L GLCR  + E+A  ++ ++       N+ ++ I++N  C
Sbjct: 486 LFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLC 542

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           QKG +++AIE+L  M   G  P   T N L+    + G  +D   AL  L  M  KP++ 
Sbjct: 543 QKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDD---ALKLLSTMSCKPDAI 599

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           S+   ++ +CR  +   A EL+ E++
Sbjct: 600 SYNSTLKGLCRAERWQDAEELVAEML 625



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 165/318 (51%), Gaps = 11/318 (3%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R  PN   F   I+  C+ G L+ A ++L +M +   + P+++ YSTLI+G  + G   +
Sbjct: 220 RCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCT-PDVVIYSTLINGFSEQGHVDQ 278

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A++L   M+ K    P+ + YN  + G C   + +   ++M  M   GC+PN   ++ L+
Sbjct: 279 ALDLLNTMLCK----PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLI 334

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +  C+   +  A EV ++M+ +  +PDT+ Y  +IN     GRVD+AL LL  M    CK
Sbjct: 335 SSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CK 391

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D + FN +L G CR  +  +A  ++ +++ D   L + ++ I+++  CQ G +  A ++
Sbjct: 392 PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQV 451

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M      P   T + LL    + G+ E  AI LF    M  KP+  S+  +++ +CR
Sbjct: 452 FEQMPRYRCTPDIVTYSSLLNGFSEQGLVE-VAIQLFR--SMPCKPDIFSYNAVLKGLCR 508

Query: 497 GRKLLFAFELLDELVIKE 514
             +   A EL+ E+V K+
Sbjct: 509 AARWEDAGELIAEMVGKD 526



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 159/305 (52%), Gaps = 12/305 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N L+  +C+ G L  A  VL   + +  +  N++TY+ LIDG C++GR  +A+ L   M 
Sbjct: 128 NTLVAGYCRDGRLADAERVLGAARATGAA--NVVTYTALIDGYCRSGRLDDALRLIASM- 184

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
               + PD  TYN ++ G C   K + A+++M  M  N C PN   + T +  FC+ G L
Sbjct: 185 ---PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLL 241

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A ++ D+M  +   PD + Y+TLIN F   G VD+AL+LL  M    CK + V +N  
Sbjct: 242 DRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC   + E+   ++ ++   G   N+A++ ++++  CQ   ++ A+E+L  M   G 
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P     N ++  L + G  +D   AL  L  M  KP++  +  +++  CR  +   A E
Sbjct: 359 EPDTVNYNIIINSLSERGRVDD---ALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASE 415

Query: 506 LLDEL 510
           L+ ++
Sbjct: 416 LIAQM 420



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 186/383 (48%), Gaps = 20/383 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ NT+  +     N   Y   L  L   +++E +  ++ +M  + C  +E  F  L+
Sbjct: 279 ALDLLNTMLCKP----NTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLI 334

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 +L +  +E+  ++     E P     +  +N L E  +VD A   L      + 
Sbjct: 335 SSLCQNNLVDSAVEVLEQMEKYGCE-PDTVNYNIIINSLSERGRVDDALRLLN----SMV 389

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+   FN ++K  C+      A E++ +M +       + T++ LID LC+NG    A
Sbjct: 390 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEM-TFNILIDMLCQNGLVNYA 448

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++FE+M  + +  PD +TY+ L++GF   G V+ A ++   M    C P++F+Y  ++ 
Sbjct: 449 TQVFEQM-PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLK 504

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+  + ++A E+  EM      P+ + +  LIN  C+ G VD A+E+L++M   G   
Sbjct: 505 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 564

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI T+N ++ G   +G++++AL +L  +       +  SY   L   C+    + A EL+
Sbjct: 565 DIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELV 621

Query: 438 RLMLCRGFLPHYAT---SNELLV 457
             ML     P+  T   +N LL+
Sbjct: 622 AEMLRNKCTPNEVTFKYANHLLM 644



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 157/308 (50%), Gaps = 10/308 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           NILIK  C    L  A  VL  +K +  +    ++++TL+ G C++GR  +A  +     
Sbjct: 94  NILIKKLCATRRLADAERVLDALKAAAAAD--AVSHNTLVAGYCRDGRLADAERVLG--A 149

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           ++     + +TY  LIDG+CR G++D A +++  M      P+ + Y T++ G C   K 
Sbjct: 150 ARATGAANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKW 206

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EA+E+  EM      P+ + + T I  FC+ G +D A++LL +M   GC  D+V ++ +
Sbjct: 207 EEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTL 266

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G   +G +++AL +L  +       N   Y   L   C     E   EL+  M+ +G 
Sbjct: 267 INGFSEQGHVDQALDLLNTMLCKP---NTVCYNAALKGLCIAERWEDIGELMAEMVRKGC 323

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+ AT + L+  LC+  + + A   L  + + G +P++ ++ +++  +    ++  A  
Sbjct: 324 SPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALR 383

Query: 506 LLDELVIK 513
           LL+ +V K
Sbjct: 384 LLNSMVCK 391


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 154/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKENKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 NKLFDEMLVK-ALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    L+PD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A ++FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 151/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 NKLFDEMLVKAL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 132/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + N++D A    K  ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKENKMDDAN---KLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GLCK G  ++A +L +EM S   + PD +TY  L
Sbjct: 266 AMEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM-SMKGLQPDKITYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/299 (20%), Positives = 128/299 (42%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI G  ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAILETKGTQRS--DIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVP-- 106

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E +           Y  L+ GF            ++E
Sbjct: 107 ---------------FDTCRKVLEHLMK-------LKYFKLVWGF------------YEE 132

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G 
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++ +++ A +L   ML +  +P+  T   
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTT 252

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK G  + A      ++     P+  ++  L+  +C+   L  A +L+DE+ +K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMK 311


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 226 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 285 GLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  +  GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 345 DEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 404

Query: 438 RLMLCRGFLPHYAT 451
           + M   G +P   T
Sbjct: 405 KEMQRDGHVPSVVT 418



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 190 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L   LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 407



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 142/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L  Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 12  TLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 71

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E +                   G
Sbjct: 72  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 131

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 311

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 312 ITYTTLIDGCCKEGDLDSAFE 332



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E   +Q S  +J  +S LI    ++G  R+AIE +         +P  
Sbjct: 45  KGSASAVFAAIXETXGTQRS--DJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFD 102

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGF--------YEEILEC----GYPASLYFFNILMHRFCKDG 150

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 151 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 210

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T N L+  LCK G                                    L  A
Sbjct: 271 SLSPDLITYNTLIYGLCKKG-----------------------------------DLKQA 295

Query: 504 FELLDELVIK 513
             L+DE+ +K
Sbjct: 296 HHLIDEMSVK 305


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 211/434 (48%), Gaps = 12/434 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF---SNCS 144
           ++G+  +  TY T++  L    +      +  +M    C  +   +  LMK      N S
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218

Query: 145 ----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
               LH+ +L     ++ I   KP + + S  ++ L +  + D A++  +       + P
Sbjct: 219 IALKLHQEMLND-SSLYGINF-KPVVISYSIIIDALCKDRREDEARDLFEEMKVQ-GMTP 275

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
               +  LI   C  G  E A  +  EM  +Q   PN++T++ LID LCK G+  EA +L
Sbjct: 276 TVISYTSLIHGFCCGGKWEEAKRLFNEMV-NQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 334

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            E M+ +  I+P+ LTYN LI+GFC  G ++ A+++   M + GC P+V  YT L+NG+C
Sbjct: 335 LEVMIQRG-IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 393

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  K++EA ++++ M     +PD   Y  L+    + G+V +A +L   MK  G   D+ 
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 453

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            + I L GLC+ G + EA+ +  KL    I L+   +  +++  C+ G+LE A EL   +
Sbjct: 454 IYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 513

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                 P   T N ++   C+ G    A I    + + G  P+  ++A L+      +KL
Sbjct: 514 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKL 573

Query: 501 LFAFELLDELVIKE 514
               ELL  +V ++
Sbjct: 574 EKVVELLHMMVQRD 587



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 45/344 (13%)

Query: 211 HHCKRG--TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           H+CK G  T   AF+    M  S  + P L +++ L+ GL K   + +   L+ +M    
Sbjct: 68  HNCKTGNITATQAFQFFHLMMYSNPT-PPLSSFTHLLSGLAKIKHYSQVFYLYNQM-RLS 125

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            I PD  T N+L++  C   +V     +M  +   G  P++  YTTL+ G C E ++ +A
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAG------------------------------ 358
             +F  M+     P+ I Y TL+   CR G                              
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245

Query: 359 -----------RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
                      R DEA +L +EMK +G    ++++  ++ G C  GK EEA  +  ++  
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN 305

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  N  ++ ++++  C++G++ +A +LL +M+ RG +P+  T N L+   C  G    
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 365

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           A      +   G +P+   + +L+   C+  K+  A +L + ++
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 155/328 (47%), Gaps = 21/328 (6%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           IS+ + I    C  + + A  +FN +  Q G   N  T+  ++D L +  K      +L 
Sbjct: 278 ISYTSLIHGFCCGGKWEEAKRLFNEMVNQ-GVQPNVVTFNVLIDVLCKEGKVIEAKDLLE 336

Query: 120 QMTYETCKFHEGIFLNLMKH------FSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
            M         GI  NL+ +      F          E+F  + P    +P +   +  +
Sbjct: 337 VM------IQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM-PSKGCEPDVICYTVLI 389

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
           N   ++++V+ A   +K  N  L++  +P+   +  L+    + G +  A ++   MK  
Sbjct: 390 NGYCKTSKVEEA---MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVY 446

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +   +L  Y   ++GLCKNG   EA+ELF ++ S + I  D   +N LIDG C+ GK++
Sbjct: 447 GIP-GDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN-IKLDIECFNCLIDGLCKAGKLE 504

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A ++ E +      P+V  Y  +++ FC+ G++ +A  +F +M+     PD I Y TLI
Sbjct: 505 TAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 564

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADI 379
             F  + ++++ +ELL  M +R    D+
Sbjct: 565 RGFFESKKLEKVVELLHMMVQRDVSLDV 592


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 224/487 (45%), Gaps = 42/487 (8%)

Query: 65  AISLIKCEKEPQCALEIFN-TVSEQKG---FNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           A S   C   P  A+ +FN   S  +G    +  + TYA ++D   R  + E   A   Q
Sbjct: 80  APSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQ 139

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           +     + +  I  +L++ F      +  L++     P     P + + S  L  L +  
Sbjct: 140 LLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 199

Query: 181 QVDLAQNFLKYSNQHLRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +   A + L+   +   +  PN   +N +I    K G +  A ++ KEM +  +  P+L+
Sbjct: 200 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP-PDLV 258

Query: 240 TYSTLIDGLCK-----------------------------------NGRFREAIELFEEM 264
           TY++++  LCK                                    G+++EA+ +F+EM
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  ILPD +T ++L+   C+ GK+  A+ + + M   G NP+VF+Y  ++NG+  +G 
Sbjct: 319 -RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 377

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +  ++FD M    + PD   +  LI  +   G +D+A+ +  EM++ G K D+VT+  
Sbjct: 378 LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 437

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR GK+++A+    ++   G+  +K +Y  ++   C  G L KA EL+  ++  G
Sbjct: 438 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 497

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                   + ++  LCK G   DA       V +G  P++  + +L++  C   K+  A 
Sbjct: 498 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 557

Query: 505 ELLDELV 511
            + D +V
Sbjct: 558 RVFDAMV 564



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 214/410 (52%), Gaps = 11/410 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+T++  KG N +  +Y  +L+  A       +  +   M  +        F  L+
Sbjct: 346 ARDVFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 404

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQ 194
           K ++NC + ++ + +F+++  H +   KP +    T +  L    ++D A + F +  +Q
Sbjct: 405 KAYANCGMLDKAMIIFNEMRDHGV---KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 461

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            +   P+   +N LI+  C  G+L  A E++ E+  + M + +++ +S++I+ LCK GR 
Sbjct: 462 GV--APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM-HLDIVFFSSIINNLCKLGRV 518

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  +F+  V+   + PDA+ YN+L+DG+C  GK+++A ++ + M + G  PNV  Y T
Sbjct: 519 MDAQNIFDLTVNVG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 577

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G++ E   +F EM    +KP TI Y+ +I+    AGR   A     EM E G
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG 637

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI T+NI+L GL +    +EA+ + ++L    + +N  +   +++   Q   +E+A 
Sbjct: 638 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 697

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +L   +     +P   T + ++  L K G+ E+A      +   G +P S
Sbjct: 698 DLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 747



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 187/405 (46%), Gaps = 76/405 (18%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY +++  L + +  +  +A LRQM  +    +   + NL+  +S+    +
Sbjct: 250 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 309

Query: 148 RVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNF-----LKYSNQHL---- 196
             + +F ++  H I    P +  +S  +  L +  ++  A++      +K  N  +    
Sbjct: 310 EAVRVFKEMRRHSIL---PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 366

Query: 197 -------------------------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     + P+   FN+LIK +   G L+ A  +  EM+  
Sbjct: 367 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 426

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  P+++TY T+I  LC+ G+  +A+E F +M+ +  + PD   YN LI GFC  G + 
Sbjct: 427 GVK-PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLL 484

Query: 292 RAKKIMEFMKNNG-----------------------------------CNPNVFNYTTLM 316
           +AK+++  + NNG                                    +P+   Y  LM
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+C  GK+++A  VFD M +  ++P+ +GY TL+N +C+ GR+DE L L +EM +RG K
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK 604

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
              + ++II+ GL   G+   A     ++   GI ++  +Y IVL
Sbjct: 605 PSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 172/396 (43%), Gaps = 42/396 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IFN + +  G   +  TY T++  L R  K +       QM  +     +  +  L+
Sbjct: 416 AMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 474

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQH 195
           + F  C+ H  +L+    I  I      L  +  S+ +N L +  +V  AQN    +  +
Sbjct: 475 QGF--CT-HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT-VN 530

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P+  ++N+L+  +C  G +E A  V   M  + +  PN++ Y TL++G CK GR  
Sbjct: 531 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE-PNVVGYGTLVNGYCKIGRID 589

Query: 256 EAIELFEEMVSKD--------QILPDAL--------------------------TYNVLI 281
           E + LF EM+ +          I+ D L                          TYN+++
Sbjct: 590 EGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G  +    D A  + + ++      N+    T+++G  +  +++EAK++F  +    L 
Sbjct: 650 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 709

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  + Y+ +I    + G V+EA ++   M+  GC+ +    N ++  L ++ +I  A   
Sbjct: 710 PSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAY 769

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           L K+      L   +  ++++    KG   + I  L
Sbjct: 770 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF    S+ Q    + P + TY +L+D   R  + + A      +   G   N+   
Sbjct: 93  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 152

Query: 313 TTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             L+ GFC+  +  EA ++           PD   Y+ L+   C  G+  +A +LL+ M 
Sbjct: 153 NHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 212

Query: 372 ERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           E G  C  ++V +N ++ G  +EG + +A  + +++   GI  +  +Y  V++  C+   
Sbjct: 213 EGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 272

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           ++KA   LR M+ +  LP+  T N L+      G  ++A      +      P+  + ++
Sbjct: 273 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 332

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A ++ D + +K
Sbjct: 333 LMGSLCKYGKIKEARDVFDTMAMK 356


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 247/518 (47%), Gaps = 35/518 (6%)

Query: 18  STSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQC 77
           S  S + P  + +EV  +   +   P+E     + +R RS  I+     S+++ + + + 
Sbjct: 24  SYHSRTNPIATSIEV--STIIETLDPMEDGLKVISSRIRSYTIT-----SVLQEQPDTRL 76

Query: 78  ALEIFNTVSEQKGFNHNNATYAT-ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL 136
              +F  +   K ++    T    I+ KL +   FE    VL+++     K     F  L
Sbjct: 77  GFRLF--IWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVL 134

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           ++ +S   + E+ +E F  +      KP L A +  L+ L+      LA   L   NQ L
Sbjct: 135 IEAYSEAGMDEKAVESFGLMRDFDC-KPDLFAFNLILHFLVRKEAFLLA---LAVYNQML 190

Query: 197 R--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           +  L P+   + ILI   CK    + A  +  EM    +  PN I YS ++ GLC+  + 
Sbjct: 191 KCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI-LPNQIIYSIVLSGLCQAKKI 249

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  LF +M +      D +TYNVL++GFC+ G +D A  +++ +  +G    V  Y  
Sbjct: 250 FDAQRLFSKMRASG-CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG  +  + +EA   + +M    +KPD + YT +I    + GRV EAL LL EM ERG
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            + D + +N ++ G C  G ++EA  +  ++     + N  +Y I++   C+ G + KA 
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP------------ 482
            + + M   G LP   T N L+  LCKA   E+A + LF  +E+  KP            
Sbjct: 429 HIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARL-LFYQMEIVRKPSLFLRLSQGTDK 487

Query: 483 --ESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
             +  S  +++E +C    +L A++LL +LV  +SG +
Sbjct: 488 VFDIASLQVMMERLCESGMILKAYKLLMQLV--DSGVL 523



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 174/356 (48%), Gaps = 24/356 (6%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           Y  +++ L R +++E      ++M  E  K    ++  +++  S      RV E    + 
Sbjct: 306 YGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ---EGRVTEALTLLG 362

Query: 158 PITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            +T     L+  + C N LI+       +D A++     ++H    PN   ++ILI   C
Sbjct: 363 EMTER--GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH-DCFPNNHTYSILICGMC 419

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM--VSKDQIL 271
           K G +  A  + KEM+K     P+++T+++LI+GLCK  R  EA  LF +M  V K  + 
Sbjct: 420 KNGLINKAQHIFKEMEKLG-CLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLF 478

Query: 272 P----------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
                      D  +  V+++  C  G + +A K++  + ++G  P++  Y  L+NGFCK
Sbjct: 479 LRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK 538

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G +  A ++F EM+     PD++ Y TLI+   RAGR ++ALE+ ++M ++GC  +  T
Sbjct: 539 FGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESST 598

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +  I+   CRE  I  AL +  K   D         R+V   S    EL+ AI  L
Sbjct: 599 YKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAE-SFDNEELQTAIRRL 653



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 38/245 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMK-KSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           P+   +NILI   CK G +  AF++ KEM+ K  M  P+ +TY TLIDGL + GR  +A+
Sbjct: 524 PDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHM--PDSVTYGTLIDGLYRAGRNEDAL 581

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI-MEFMKN--------------- 302
           E+FE+MV K  + P++ TY  ++   CR   +  A  + M+++++               
Sbjct: 582 EIFEQMVKKGCV-PESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAES 640

Query: 303 ------------------NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
                                N ++  YT  + G  +  +  EA  +F  +K+F +   +
Sbjct: 641 FDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISS 700

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
                LI   C    +D A+++     ERG +      N +L  L    + ++AL +  +
Sbjct: 701 ASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANR 760

Query: 405 LWYDG 409
           +   G
Sbjct: 761 MEASG 765


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 169/309 (54%), Gaps = 12/309 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N L+  +C+ G+L  A  V++  + S  +  N++TY+ LIDG C++GR  +A+ L   M 
Sbjct: 154 NTLVAGYCRDGSLGDAERVVEAARASGTA--NVVTYTALIDGYCRSGRLADALRLIASM- 210

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
               + PD  TYN ++ G C   + ++A+++M  M  N C+PN   + T +  FC+ G L
Sbjct: 211 ---PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLL 267

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A E+ ++M  +   PD I Y+TL+N F   GRVDEAL+LL  M    C+ + V +N  
Sbjct: 268 DRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAA 324

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC  G+ EE   ++ ++       N A++  ++N  CQ   +E A+E+L  M   G+
Sbjct: 325 LKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGY 384

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           +P   + N ++        A+D   AL  L  M  KP++ S+  +++ +C+ ++   A E
Sbjct: 385 MPDVVSYNTIISCFSDQARADD---ALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVE 441

Query: 506 LLDELVIKE 514
           L+ +++ K+
Sbjct: 442 LVAKMLKKD 450



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 215/449 (47%), Gaps = 45/449 (10%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+L  L   K++E  + ++R+M   +C  +E  F   ++ F    L +R +E+  ++
Sbjct: 218 TYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 277

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
            P     P +   ST +N   E  +VD A   LK  N  L  +PNT  +N  +K  C  G
Sbjct: 278 -PKYGCTPDVIIYSTLVNGFSEHGRVDEA---LKLLNTML-CRPNTVCYNAALKGLCIAG 332

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
             E   E++ EM +     PN  T+STLI+ LC+N     A+E+ E+M  K   +PD ++
Sbjct: 333 RWEEVGELIAEMVRKDCP-PNDATFSTLINSLCQNRLVEYAVEVLEQM-QKYGYMPDVVS 390

Query: 277 YNVLIDGFCRGGKVDRAKKIMEF--------------------------------MKNNG 304
           YN +I  F    + D A K+++                                 M    
Sbjct: 391 YNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKD 450

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C  N   +  L++  C+ G++++A EVF+ M  +   PD + Y++LIN F   G  + A 
Sbjct: 451 CRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAF 510

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +L + M    C+ADI ++N  L GLC   + ++A  ++  +  +    N+ ++ I+++  
Sbjct: 511 DLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSL 567

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           CQKG + +AI++   M   G  P   T N L+    + G  +D   AL  L  M  +P++
Sbjct: 568 CQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDD---ALKFLSTMPCEPDT 624

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIK 513
            S+  +++ +CR  +   A +L+ E++ K
Sbjct: 625 ISYNSILKGLCRAERWKDAEKLVTEMLRK 653



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 176/373 (47%), Gaps = 46/373 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ NT+  +     N   Y   L  L    ++E V  ++ +M  + C  ++  F  L+
Sbjct: 305 ALKLLNTMLCRP----NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLI 360

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  L E  +E+  ++       P + + +T ++   +  + D A   LK     + 
Sbjct: 361 NSLCQNRLVEYAVEVLEQMQKYGY-MPDVVSYNTIISCFSDQARADDALKLLK----SML 415

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+T  FN ++K  CK      A E++ +M K      N +T++ LID LC+NG+ ++A
Sbjct: 416 CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRI-NEMTFNILIDSLCQNGQVKDA 474

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGF--------------------------------C 285
           IE+FE ++ K + +PD +TY+ LI+GF                                C
Sbjct: 475 IEVFE-LMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLC 533

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
              + D A +++  M    C PN   +  L++  C++G +  A +V+++M  + + PD  
Sbjct: 534 MAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIF 593

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  LIN +   GR+D+AL+ L  M    C+ D +++N IL GLCR  + ++A  ++ ++
Sbjct: 594 TYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEM 650

Query: 406 WYDGIYLNKASYR 418
                  N+ +++
Sbjct: 651 LRKNCTPNEVTFK 663



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 147/275 (53%), Gaps = 9/275 (3%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +I+ + LI  LC   R  +A  + E +  K     DA+++N L+ G+CR G +  A++
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEAL--KASGAADAVSHNTLVAGYCRDGSLGDAER 171

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++E  + +G   NV  YT L++G+C+ G+L +A  +   M    + PDT  Y T++   C
Sbjct: 172 VVEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLC 227

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
            A + ++A EL++EM    C  + VTF   +   C+ G ++ A+ +LE++   G   +  
Sbjct: 228 CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVI 287

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  ++N   + G +++A++LL  MLCR   P+    N  L  LC AG  E+    +  +
Sbjct: 288 IYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEM 344

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           V     P   +++ L+  +C+ R + +A E+L+++
Sbjct: 345 VRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQM 379


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 181/357 (50%), Gaps = 38/357 (10%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +T +N + +      A  FL+  +  L  KP+  ++N +I   CK   +  A+ +  EM 
Sbjct: 168 ATLINGVCKIGDTRAAIKFLRKIDGRLT-KPDVVMYNTIIDAMCKYQLVSEAYGLFSEMA 226

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
              +S  +++TY+TLI G C  G+ +EAI L  EMV K  I P+  TYN+L+D  C+ GK
Sbjct: 227 VKGIS-ADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK-TINPNVYTYNILVDALCKEGK 284

Query: 290 VDRAKKIMEFMKNN-----------------------------------GCNPNVFNYTT 314
           V  AK ++  M                                      G  P+V  YT 
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NGFCK   + EA  +F EM    + P  + Y++LI+  C++GR+    +L+ EM++RG
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
             AD++T++ ++ GLC+ G ++ A+ +  K+    I  N  ++ I+L+  C+ G L+ A 
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           E+ + +L +G+  +  T N ++   CK G+ E+A   L  + + G  P + ++  ++
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 159/283 (56%), Gaps = 2/283 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +NIL+   CK G ++ A  VL  M K+ +  P++ITYSTL+DG       ++A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK-PDVITYSTLMDGYFLVYEVKKA 323

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F  M S   + PD  TY +LI+GFC+   VD A  + + M      P +  Y++L++
Sbjct: 324 QHVFNAM-SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G++    ++ DEM++     D I Y++LI+  C+ G +D A+ L  +MK++  + 
Sbjct: 383 GLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP 442

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I TF I+L GLC+ G++++A  + + L   G +LN  +Y +++N  C++G LE+A+ +L
Sbjct: 443 NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 502

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             M   G +P+  T   +++ L K    + A   L  ++  G 
Sbjct: 503 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 6/317 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLK--EMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +R  P    FN ++    K     +A  +    E+K  Q   P+LIT + LI+  C  G+
Sbjct: 53  MRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQ---PDLITLNILINCFCHMGQ 109

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
                 +  +++ K    PD +T N LI G C  G+V +A    + +   G   N  +Y 
Sbjct: 110 ITFGFSVLAKIL-KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 168

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+NG CK G  + A +   ++   L KPD + Y T+I+  C+   V EA  L  EM  +
Sbjct: 169 TLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVK 228

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G  AD+VT+N ++ G C  GK++EA+G+L ++    I  N  +Y I+++  C++G++++A
Sbjct: 229 GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             +L +ML     P   T + L+         + A      +  MG  P+  ++ +L+  
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 494 ICRGRKLLFAFELLDEL 510
            C+ + +  A  L  E+
Sbjct: 349 FCKNKMVDEALNLFKEM 365



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 102/207 (49%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  +++ F K      A  +   ++   ++PD I    LINCFC  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ +RG   D VT N ++ GLC +G++++AL   +KL   G  LN+ SY  ++N  C+
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+   AI+ LR +  R   P     N ++  +CK  +  +A      +   G   +  +
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  L+   C   KL  A  LL+E+V+K
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLK 263



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 87/189 (46%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F+ M      P  I +  +++ F +      A+ L   ++ +G + D++T NI
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C  G+I     +L K+   G   +  +   ++   C KG+++KA+     +L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           F  +  +   L+  +CK G    A   L  +     KP+   +  +++ +C+ + +  A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 505 ELLDELVIK 513
            L  E+ +K
Sbjct: 220 GLFSEMAVK 228


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 165/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A  LF+EM+ K  ++P+ +T+  LIDG 
Sbjct: 194 KNAMQVSGVQ-PDVYTYSVLINGLCKESKMDDANVLFDEMLDKG-LVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    L PD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G++P   T
Sbjct: 372 MLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A  +FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 4/279 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLR-PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 265 -VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
            VS  Q  PD  TY+VLI+G C+  K+D A  + + M + G  PN   +TTL++G CK G
Sbjct: 198 QVSGVQ--PDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G   D +T+ 
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYT 315

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNV 375

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           G  P   T   ++   CK G     +  L  +   G+ P
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 152/299 (50%), Gaps = 19/299 (6%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         L   
Sbjct: 45  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYR--------LTKE 94

Query: 275 LTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQ 326
             + V  D  CR       K+   K +  F + +   G   +++ +  LM+ F KEG+++
Sbjct: 95  HKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIR 153

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+ VFD +  + L+P  + + TL+N + + G +DE   L   M+  G + D+ T+++++
Sbjct: 154 LAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLI 213

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +   
Sbjct: 214 NGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           P   T N L+  LCK G  + A   +  ++  G  P+  ++  L++  C+   L  AFE
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFE 332


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 227/488 (46%), Gaps = 38/488 (7%)

Query: 56  RSRFISHGAAIS----LIKC---EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARY 108
           R RF      IS    L +C   E    C + ++  ++  K       T+  ++  L   
Sbjct: 108 RDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAK-VKPQTYTFNLLISALCEM 166

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
              E    V  +M+ + CK +E     L++ +    LH   +++  ++   +   P+  A
Sbjct: 167 GYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRS-SGALPNRVA 225

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +T ++ L    Q   A+  ++   + + L P+   FN  I   CK G +  A  + ++M
Sbjct: 226 YNTVISSLCGEGQTVEAEKLVE-KMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDM 284

Query: 229 KKSQ---MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
           +  +   +  PN +TY+ +++G C  G F EA  +F+ M + + +     +YN+ + G  
Sbjct: 285 QIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL--SLRSYNIWMLGLV 342

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R GK+  A  I+  M      PN+++Y  L++G CK G   +A+ +   M+   + PDT+
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y+TL++ +CR G++ EA  +L+EM + GC  ++ T NI+L  L +EG+  EA  +L+ +
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF-------------------- 445
              G  L+  +   ++N  C+ G L+KAIE++  M  RG                     
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNG 522

Query: 446 ---LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
              LP   T   ++  LCK G  ++A   L  ++     P+S  +   +   C+  KL  
Sbjct: 523 KKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSS 582

Query: 503 AFELLDEL 510
           AF +L E+
Sbjct: 583 AFRVLKEM 590



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 197/387 (50%), Gaps = 19/387 (4%)

Query: 143 CSLHERVLE---MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRL 198
           CSL E  ++     +K   + + KP     +  ++ L E   ++ A+  F K S +    
Sbjct: 127 CSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGC-- 184

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN     IL++ +C+ G      ++L EM+ S  + PN + Y+T+I  LC  G+  EA 
Sbjct: 185 KPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG-ALPNRVAYNTVISSLCGEGQTVEAE 243

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG----CNPNVFNYTT 314
           +L E+M  +  + PD +T+N  I   C+ G++  A +I   M+ +       PN   Y  
Sbjct: 244 KLVEKM-REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNL 302

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG---YTTLINCFCRAGRVDEALELLKEMK 371
           ++ GFC EG  +EA+ +FD MKN     +T+    Y   +    R+G++ EA  +L EM 
Sbjct: 303 MLEGFCSEGMFEEARAIFDSMKN----SETLSLRSYNIWMLGLVRSGKLLEAHLILNEMA 358

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+  K ++ ++NI++ GLC+ G   +A  +L  +   G+  +  +Y  +L+  C++G++ 
Sbjct: 359 EKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKIL 418

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +A  +LR M+  G  P+  T N LL  L K G A +A   L  + E G+  ++ +   ++
Sbjct: 419 EANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMI 478

Query: 492 ELICRGRKLLFAFELLDELVIKESGTI 518
             +C+   L  A E++  +  + S ++
Sbjct: 479 NGLCKAGNLDKAIEIVSGMWTRGSASL 505



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 200/413 (48%), Gaps = 38/413 (9%)

Query: 85  VSEQKGF-NHNNATYATILDKLARYKKFEAVDAVLRQMTYE---TCKFHEGIFLNLMKHF 140
           + E+ G    N  TY  +L+       FE   A+   M      + + +    L L++  
Sbjct: 286 IDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSG 345

Query: 141 SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
                H  + EM  K       KP+L + +  ++ L +      A++ L    +   + P
Sbjct: 346 KLLEAHLILNEMAEK-----NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRES-GVAP 399

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T  ++ L+  +C+RG +  A  VL+EM +    +PN+ T + L+  L K GR  EA +L
Sbjct: 400 DTVTYSTLLHGYCRRGKILEANYVLREMIQVG-CFPNMYTCNILLHSLWKEGRASEAEDL 458

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-------------------- 300
            + M  +   L D +T N +I+G C+ G +D+A +I+  M                    
Sbjct: 459 LQMMNERGYGL-DNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFD 517

Query: 301 -KNNG--CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
            +NNG  C P+   Y T++ G CK G++ EAK+   EM    L PD++ + T I  +C+ 
Sbjct: 518 IRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQ 577

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G++  A  +LKEM+++GC   + T+N ++ GL  E +I E  G+++++   GI+ N  +Y
Sbjct: 578 GKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTY 637

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL---VRLCKAGMAED 467
             +++   + G+L+ A  LL  ML +G  P+  T   L+    + C  G A++
Sbjct: 638 NNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQE 690



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 40/448 (8%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           I N ++E K    N  +Y  ++  L +Y  F    ++L  M           +  L+  +
Sbjct: 353 ILNEMAE-KNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGY 411

Query: 141 SNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH-LR 197
                  ++LE  + +  + +    P++   +  L+ L +  +   A++ L+  N+    
Sbjct: 412 CR---RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYG 468

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM----------------------KKSQMSY 235
           L   TC  N +I   CK G L+ A E++  M                         +   
Sbjct: 469 LDNVTC--NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCL 526

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+ ITY+T+I GLCK GR  EA +   EM+ K ++ PD+L ++  I  +C+ GK+  A +
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGK-KLSPDSLIFDTFIYNYCKQGKLSSAFR 585

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M+  GCN ++  Y +L+ G   E ++ E   + DEMK   + P+   Y  +I+C  
Sbjct: 586 VLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLS 645

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL--- 412
             G++ +A  LL EM ++G   +I TF I++G   +        G  ++L+   + L   
Sbjct: 646 EGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACD----FGAAQELFEIALSLCGH 701

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
            ++ Y  + N     GE  KA EL    L R          +L+ +LCK G  +DA+  L
Sbjct: 702 KESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFIL 761

Query: 473 FGLVEMGFKPESDSWALLV-ELICRGRK 499
             +++  +  +  S+  ++ EL  RG K
Sbjct: 762 HKMMDKQYSFDPASFMPVIDELGKRGSK 789



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 3/245 (1%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +L P++ IF+  I ++CK+G L SAF VLKEM+K   +  +L TY++LI GL    +  E
Sbjct: 559 KLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCN-KSLRTYNSLIQGLGSENQIFE 617

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
              L +EM  +  I P+  TYN +I     GGK+  A  +++ M   G +PN++ +  L+
Sbjct: 618 IYGLMDEMKERG-IFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI 676

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
             F K      A+E+F+   +     +++ Y+ + N     G   +A EL +   +R   
Sbjct: 677 GAFFKACDFGAAQELFEIALSLCGHKESL-YSFMFNELLAGGETLKAKELFEAALDRSLA 735

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
                +  ++  LC++GK+++A  +L K+       + AS+  V++   ++G    A E 
Sbjct: 736 LKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEF 795

Query: 437 LRLML 441
              M+
Sbjct: 796 AERMM 800



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 6/276 (2%)

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALT-YNVLIDGFCRGGKVDRAKKIMEFMK 301
           +L+  L   G    AI  F  +  +    P  ++ YN+L     +  +VD    + + M 
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                P  + +  L++  C+ G L+ A+EVFD+M     KP+      L+  +CRAG   
Sbjct: 146 VAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
             ++LL EM+  G   + V +N ++  LC EG+  EA  ++EK+   G+  +  ++   +
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 422 NFSCQKGELEKAIELLRLMLCRGFL----PHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
              C+ G++ +A  + R M     +    P+  T N +L   C  GM E+A  A+F  ++
Sbjct: 266 AALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR-AIFDSMK 324

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                   S+ + +  + R  KLL A  +L+E+  K
Sbjct: 325 NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK 360



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 5/235 (2%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN-FLLKPDTIG- 346
           ++D   +++     +  +P+ F   +L+      G L+ A   F  +++ F   P  I  
Sbjct: 64  QIDHLHQLLLSQHRDFAHPSGF---SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISF 120

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y  L  C  +  RVD  + L K+M     K    TFN+++  LC  G +E A  + +K+ 
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMS 180

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G   N+ S  I++   C+ G     I+LL  M   G LP+    N ++  LC  G   
Sbjct: 181 EKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTV 240

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           +A   +  + E+G  P+  ++   +  +C+  ++L A  +  ++ I E   +  P
Sbjct: 241 EAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 152/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 170 LRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGV-LPDVYTYSVLINGLCKESKMDDA 228

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 229 NELFDEMLVKG-LIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIY 287

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD   YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 288 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 347

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 348 DDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLL 407

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 408 KEMQRNGHAPSVVTYNVLM 426



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 134 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGHLDE 192

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 193 GFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 252

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 253 GHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 312

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 313 DKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKML 372

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 373 REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 410



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 152/287 (52%), Gaps = 2/287 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P++++Y+TL++G  + G   E   L   M
Sbjct: 142 FNILMHRFCKDGDIRVAQSVFDAITKWGLR-PSVVSYNTLMNGYIRLGHLDEGFRLKSAM 200

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           ++   +LPD  TY+VLI+G C+  K+D A ++ + M   G  PN   +TTL++G CK G+
Sbjct: 201 LASG-VLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGR 259

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++  M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D  T+  
Sbjct: 260 VDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT 319

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG ++ A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 320 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVG 379

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
             P   T   ++   CK G     +  L  +   G  P   ++ +L+
Sbjct: 380 LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 426



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I    +D  + F LK +     + P+   +++LI   CK   ++ A
Sbjct: 171 RPSVVSYNTLMNGYIRLGHLD--EGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDA 228

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E+++ M+S+  +LPD +TYN LI
Sbjct: 229 NELFDEMLVKGL-IPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQ-SLLPDLITYNTLI 286

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+ F YTTL++G CKEG L  A E    M    ++
Sbjct: 287 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 346

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + Y  LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 347 LDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 406

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  +G   +  +Y +++N
Sbjct: 407 LKEMQRNGHAPSVVTYNVLMN 427



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 128/227 (56%), Gaps = 7/227 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLESA 221
           P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ A
Sbjct: 207 PDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLIPNGVTFTTLIDGHCKNGRVDFA 263

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+ K M  SQ   P+LITY+TLI GLCK G  ++A +L +EM S   + PD  TY  LI
Sbjct: 264 MEIYKRML-SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMKGLKPDKFTYTTLI 321

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG C+ G +D A +  + M       +   Y  L++G C+EG+  +A+++  EM +  LK
Sbjct: 322 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLK 381

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           PDT  YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 382 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 150/302 (49%), Gaps = 25/302 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    + G  R+AIE +         +P  
Sbjct: 48  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFD 105

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 106 TCRKVLEHLMKLKYFKLVWGF--------YEEILE----CGYPASLYFFNILMHRFCKDG 153

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G   D+ T++
Sbjct: 154 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYS 213

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 214 VLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQ 273

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G  + A   +  +   G KP+  ++  L++  C+   L  A
Sbjct: 274 SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTA 333

Query: 504 FE 505
           FE
Sbjct: 334 FE 335



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 79/290 (27%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
            L +Y T+I  LC +    EA  L + +VS                   R GK   +   
Sbjct: 15  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVS-------------------RKGKGSASAVF 55

Query: 297 MEFMKNNGCN-PNVFNYTTLMNGFCKEGKLQEAKEV------------FDEMKNFLLKPD 343
              ++  G    +++ ++ L+  + + G L++A E             FD  +  L    
Sbjct: 56  AAILETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLM 115

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  L+  F             +E+ E G  A +  FNI++   C++G I  A  + +
Sbjct: 116 KLKYFKLVWGF------------YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 163

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G+  +  SY  ++N   + G L++   L   ML  G LP   T            
Sbjct: 164 AITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYT------------ 211

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                                  +++L+  +C+  K+  A EL DE+++K
Sbjct: 212 -----------------------YSVLINGLCKESKMDDANELFDEMLVK 238


>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
 gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
 gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 217/446 (48%), Gaps = 46/446 (10%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           ++P  A   F    +QK + HN   Y +++D LA  K  + +    R ++ E  KF   +
Sbjct: 130 EKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI----RFVSSEIKKFEFPM 185

Query: 133 FLN----LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            ++    L+K F    + E +L ++ K+     E P+L   +  +N L+ +  VD A+  
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIE-PTLYTYNFLMNGLVSAMFVDSAERV 244

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-----KKSQMSYPNLI---- 239
            +      R+KP+   +N +IK +CK G  + A E L++M     +  +++Y  +I    
Sbjct: 245 FEVMESG-RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303

Query: 240 -------------------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
                                     +S +I GLCK G+  E   +FE M+ K    P+ 
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNV 362

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
             Y VLIDG+ + G V+ A +++  M + G  P+V  Y+ ++NG CK G+++EA + F  
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
            +   L  +++ Y++LI+   +AGRVDEA  L +EM E+GC  D   +N ++    +  K
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482

Query: 395 IEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++EA+ + +++   +G      +Y I+L+   ++   E+A++L  +M+ +G  P  A   
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFR 542

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMG 479
            L   LC +G    A   L  L  MG
Sbjct: 543 ALSTGLCLSGKVARACKILDELAPMG 568



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 8/301 (2%)

Query: 173 LNLLIESNQV----DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           ++ +++S+++    D+A +F  +S +  +   N   +  L+        ++    V  E+
Sbjct: 119 VSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEI 178

Query: 229 KKSQMSYPNLITYS-TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           KK    +P  ++ +  LI    K G   E + ++ +M  ++ I P   TYN L++G    
Sbjct: 179 KK--FEFPMTVSAANALIKSFGKLGMVEELLWVWRKM-KENGIEPTLYTYNFLMNGLVSA 235

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
             VD A+++ E M++    P++  Y T++ G+CK G+ Q+A E   +M+    + D I Y
Sbjct: 236 MFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITY 295

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            T+I            + L +EM E+G +     F++++GGLC+EGK+ E   + E +  
Sbjct: 296 MTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIR 355

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G   N A Y ++++   + G +E AI LL  M+  GF P   T + ++  LCK G  E+
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415

Query: 468 A 468
           A
Sbjct: 416 A 416



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 39/283 (13%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN  I+ +LI  + K G++E A  +L  M       P+++TYS +++GLCKNGR  EA+
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK-PDVVTYSVVVNGLCKNGRVEEAL 417

Query: 259 E-----------------------------------LFEEMVSKDQILPDALTYNVLIDG 283
           +                                   LFEEM S+     D+  YN LID 
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDA 476

Query: 284 FCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           F +  KVD A  + + M+   GC+  V+ YT L++G  KE + +EA +++D M +  + P
Sbjct: 477 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
               +  L    C +G+V  A ++L E+   G   D    ++I   LC+ G+I+EA  + 
Sbjct: 537 TAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLA 595

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + +   G  +      +++N   + G+ + A++L+   +  G+
Sbjct: 596 DGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 638


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 154/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S + +P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGV-HPDVYTYSVLINGLCKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF+EM+ K  ++P+++T+  LIDG C+ G VD A +I + M +    P++  Y  L+ 
Sbjct: 232 NKLFDEMLEKG-LVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 163/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKEGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G +P+V+ Y+ L+NG CKE K+ +A ++FDEM    L P+++ +TTLI+
Sbjct: 196 GFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ G VD A+E+ K+M  +    D+VT+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  ++M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F   S  H   + P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++  EM +  +  PN +T++TLIDG CKNG    A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 NKLFDEMLEKGL-VPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQ-SLLPDLVTYNALI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 132/227 (58%), Gaps = 7/227 (3%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESA 221
           P +   S  +N L + +++D A    K  ++ L   L PN+  F  LI  HCK G ++ A
Sbjct: 210 PDVYTYSVLINGLCKESKMDDAN---KLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLA 266

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+ K+M  SQ   P+L+TY+ LI GLCK G  ++A +L +EM S   + PD +TY  LI
Sbjct: 267 MEIYKQML-SQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM-SMXGLKPDKITYTTLI 324

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  LK
Sbjct: 325 DGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           PDT  YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 385 PDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 183/330 (55%), Gaps = 5/330 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           KP+++  ST ++ L +   V  A     +S   ++ +  +   ++ LI   C  G L+ A
Sbjct: 196 KPNVEMYSTIIDALCKYQLVSEAYGL--FSEMTVKGISADVVTYSTLIYGFCIEGKLKEA 253

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +L EM    ++ PN+ TY+ L+D LCK G+ +EA  +   M+ K  + PD +TY+ L+
Sbjct: 254 IGLLNEMVLKTIN-PNVYTYNILVDALCKEGKVKEAKSVLAVML-KACVKPDVITYSTLM 311

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           DG+    +V +A+ +   M   G  P+V  YT L+NGFCK   + EA  +F EM    + 
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P  + Y++LI+  C++GR+    +L+ EM++RG  AD++T++ ++ GLC+ G ++ A+ +
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K+    I  N  ++ I+L+  C+ G L+ A E+ + +L +G+  +  T N ++   CK
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 491

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            G+ E+A   L  + + G  P + ++  ++
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPNAFTFETII 521



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 159/283 (56%), Gaps = 2/283 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +NIL+   CK G ++ A  VL  M K+ +  P++ITYSTL+DG       ++A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK-PDVITYSTLMDGYFLVYEVKKA 323

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F  M S   + PD  TY +LI+GFC+   VD A  + + M      P +  Y++L++
Sbjct: 324 QHVFNAM-SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G++    ++ DEM++     D I Y++LI+  C+ G +D A+ L  +MK++  + 
Sbjct: 383 GLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP 442

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I TF I+L GLC+ G++++A  + + L   G +LN  +Y +++N  C++G LE+A+ +L
Sbjct: 443 NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 502

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             M   G +P+  T   +++ L K    + A   L  ++  G 
Sbjct: 503 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 6/317 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLK--EMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +R  P    FN ++    K     +A  +    E+K  Q   P+LIT + LI+  C  G+
Sbjct: 53  MRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQ---PDLITLNILINCFCHMGQ 109

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
                 +  +++ K    PD +T N LI G C  G+V +A    + +   G   N  +Y 
Sbjct: 110 ITFGFSVLAKIL-KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 168

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+NG CK G  + A ++  ++   L KP+   Y+T+I+  C+   V EA  L  EM  +
Sbjct: 169 TLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK 228

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G  AD+VT++ ++ G C EGK++EA+G+L ++    I  N  +Y I+++  C++G++++A
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             +L +ML     P   T + L+         + A      +  MG  P+  ++ +L+  
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 494 ICRGRKLLFAFELLDEL 510
            C+ + +  A  L  E+
Sbjct: 349 FCKNKMVDEALNLFKEM 365



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 105/207 (50%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  +++ F K      A  +   ++   ++PD I    LINCFC  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ +RG   D VT N ++ GLC +G++++AL   +KL   G  LN+ SY  ++N  C+
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+   AI+LLR +  R   P+    + ++  LCK  +  +A      +   G   +  +
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           ++ L+   C   KL  A  LL+E+V+K
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLK 263



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 88/189 (46%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A   F+ M      P  I +  +++ F +      A+ L   ++ +G + D++T NI
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C  G+I     +L K+   G   +  +   ++   C KG+++KA+     +L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           F  +  +   L+  +CK G    A   L  +     KP  + ++ +++ +C+ + +  A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 505 ELLDELVIK 513
            L  E+ +K
Sbjct: 220 GLFSEMTVK 228


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 158/291 (54%), Gaps = 2/291 (0%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           T   N +I   C RG  + AFEV K+M ++ +   + ITY++LI G CK G+  E + L 
Sbjct: 403 TVTCNKIISELCSRGKSDEAFEVFKKMSETGIQ-ADAITYNSLIRGFCKEGKVDERMNLL 461

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            E+V++D   P    Y +LI   C+ G  + AK+++  M + G +PN + Y T+++G  K
Sbjct: 462 NELVAQDP-QPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLK 520

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G  +  +E+++E  N      T     +I+  C  G+ DEA E+ K+M E G KAD +T
Sbjct: 521 SGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAIT 580

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N ++ G C+EGK+ +++ +L +L   G+  + +SY  ++   CQ G+ E A  L   M+
Sbjct: 581 YNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMV 640

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
            +G  PH      L+  LCK G A +    L G++E   KP+  ++  L E
Sbjct: 641 SKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAE 691



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 161/314 (51%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +  +I   CK      A+ V  ++K    + P+ + Y+T+I GLC+ G F EA +
Sbjct: 296 PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA-PDRVMYTTMIHGLCEMGSFGEARK 354

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+ EM+ K  + P+A TYN ++ G  + G  +RA ++   M N G          +++  
Sbjct: 355 LWFEMMDKG-MQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C  GK  EA EVF +M    ++ D I Y +LI  FC+ G+VDE + LL E+  +  +  +
Sbjct: 414 CSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSV 473

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             + +++   C++G  E A  +L  +   G++ N  +Y  +L+ S + G+ E   EL   
Sbjct: 474 SLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNE 533

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
              +G+    AT N+++  LC  G +++A+     + E G K ++ ++  L+   C+  K
Sbjct: 534 TCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGK 593

Query: 500 LLFAFELLDELVIK 513
           +  +  LL+ELV +
Sbjct: 594 VGKSMNLLNELVAQ 607



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 160/348 (45%), Gaps = 42/348 (12%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  ++  +I   C+ G+   A ++  EM    M  PN  TY+T++ G  K+G F  A E
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQ-PNAYTYNTMLHGSLKSGDFERACE 389

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+ EM +K       +T N +I   C  GK D A ++ + M   G   +   Y +L+ GF
Sbjct: 390 LYNEMCNKG-YGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGF 448

Query: 320 CKEGKLQE-----------------------------------AKEVFDEMKNFLLKPDT 344
           CKEGK+ E                                   AK +  +M +  L P+ 
Sbjct: 449 CKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNA 508

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             Y T+++   ++G  +   EL  E   +G      T N I+  LC  GK +EA  M +K
Sbjct: 509 YTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKK 568

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   GI  +  +Y  ++   C++G++ K++ LL  ++ +G  P  ++   L+++LC+ G 
Sbjct: 569 MSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGD 628

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICR-GRKLLFAFELLDELV 511
           AE A      +V  G +P ++    L+  +C+ GR    A E +D L+
Sbjct: 629 AESAKRLWGDMVSKGIEPHANLREHLISGLCKQGR----ATEGMDRLM 672



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           T   N +I   C RG  + A E+ K+M ++ +   + ITY++LI G CK G+  +++ L 
Sbjct: 543 TATCNKIISELCSRGKSDEASEMFKKMSETGIK-ADAITYNSLIRGFCKEGKVGKSMNLL 601

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            E+V++  + P A +Y  LI   C+ G  + AK++   M + G  P+      L++G CK
Sbjct: 602 NELVAQG-LQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCK 660

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           +G+  E  +    M    +KP    +  L  C  ++
Sbjct: 661 QGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQS 696



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 5/211 (2%)

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           N+ C P+  +   L         ++ AK V D +  F+  PD+      + C C  G ++
Sbjct: 117 NHDCTPDPISSNMLFEALLDAKAVRAAKMVRD-IAGFI--PDSASLEQYVKCLCGVGFIE 173

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY--LNKASYRI 419
           EA+E+  ++KE G +  IV  N IL G  + GK E      +++   G     N  +   
Sbjct: 174 EAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGC 233

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C  G++ +  ELL   L  G  P   T N+L+   C+A      +  L  ++   
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
             P   ++  ++  +C+  + L A+ + ++L
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDL 324



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 110/259 (42%), Gaps = 9/259 (3%)

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           ++  F+ + +     PD ++ N+L +       V  AK + +     G  P+  +    +
Sbjct: 107 SLRFFQWLCTNHDCTPDPISSNMLFEALLDAKAVRAAKMVRDIA---GFIPDSASLEQYV 163

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
              C  G ++EA EV+ ++K   ++   +   ++++   +AG+ +   E  +EM + G  
Sbjct: 164 KCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTA 223

Query: 377 ADIVTFNI--ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           +D  T  +  ++   C  G++     +L +    G+     +Y  ++   CQ        
Sbjct: 224 SDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMS 283

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           E+L  M+ R  LP   T  E++  LCK     +A      L + G+ P+   +  ++  +
Sbjct: 284 EVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGL 343

Query: 495 CR----GRKLLFAFELLDE 509
           C     G      FE++D+
Sbjct: 344 CEMGSFGEARKLWFEMMDK 362



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 127/293 (43%), Gaps = 18/293 (6%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+ I+ + L + L      R A ++  ++      +PD+ +    +   C  G ++ A +
Sbjct: 122 PDPISSNMLFEALLDAKAVR-AAKMVRDIAG---FIPDSASLEQYVKCLCGVGFIEEAIE 177

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD----TIGYTTLI 351
           +   +K  G   ++    ++++G  K GK +   E + EM       D    T+G   LI
Sbjct: 178 VYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVG--CLI 235

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE---GKIEEAL-GMLEKLWY 407
             FC +G+V    ELL +  + G      T+N ++ G C+      + E L  M+ +   
Sbjct: 236 QAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHL 295

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
             IY    +Y+ ++N  C+  E  +A  +   +  RG+ P       ++  LC+ G   +
Sbjct: 296 PTIY----TYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGE 351

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
           A    F +++ G +P + ++  ++    +      A EL +E+  K  GT  V
Sbjct: 352 ARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTV 404


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 226/489 (46%), Gaps = 60/489 (12%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT------------ 122
           P  +LE F   S+Q  F  + ++Y  I+  L+R + ++ V   L ++             
Sbjct: 112 PDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAV 171

Query: 123 -------YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
                  Y    F   +F  ++K F+   + +  L +F  +    R  PSL++ ++ L+ 
Sbjct: 172 WDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRV-PSLRSCNSLLSN 230

Query: 176 LIESNQVDLAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
           L+++ +   A   L Y     L + P+   + I++  +CK G ++ AF  +KEM++S   
Sbjct: 231 LVQNGEAFKA--LLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCE 288

Query: 235 YPNLITYSTLID-----------------------------------GLCKNGRFREAIE 259
            PN++TY++LID                                   G CK G+  +A +
Sbjct: 289 -PNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEK 347

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L   M+ K+ +  D   Y VLI  +C  G+VD A +I + M   G   N     +L+NG+
Sbjct: 348 LIGCMMEKN-LFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGY 406

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G + +A EV   MK++ LKPD+ GY TL++ FC+     +A +L  EM  +G    +
Sbjct: 407 CKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTV 466

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N +L  L   G +E AL +   +   G+  N+ +Y  +L+   + G  ++A+ + + 
Sbjct: 467 VTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKD 526

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            L +GF       N ++   CK      A      + E+GF P+  ++  L++  C+   
Sbjct: 527 ALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGN 586

Query: 500 LLFAFELLD 508
           L+ A +L D
Sbjct: 587 LVEALKLKD 595



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 140/286 (48%), Gaps = 4/286 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LK NT I N LI  +CK G +  A EVL  MK   +  P+   Y+TL+DG CK   F +A
Sbjct: 392 LKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLK-PDSYGYNTLLDGFCKQEDFIKA 450

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L +EM +K  +    +TYN L+      G V+ A  I   M   G  PN   Y TL++
Sbjct: 451 FKLCDEMHNKG-VNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLD 509

Query: 318 GFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            F K G    A  ++ D +     K  T+ Y T+I  FC+  ++ +A E+  +MKE G  
Sbjct: 510 AFFKVGTFDRAMMIWKDALSKGFTKSITL-YNTMICGFCKMEKLVQAQEIFLKMKELGFP 568

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D +T+  ++ G C+ G + EAL + +    DGI  +   Y  ++    +  EL+K   L
Sbjct: 569 PDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGL 628

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           L  M  R   P+  T   L+   C  GM + A  A F +++ G  P
Sbjct: 629 LAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAP 674



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 138/271 (50%), Gaps = 1/271 (0%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            +  ++    + G  + A+ +F+ M  K   +P   + N L+    + G+  +A  + E 
Sbjct: 188 VFDMILKVFAEKGMTKFALCVFDNM-GKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQ 246

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G  P++F+YT ++N +CKEG++ EA     EM+    +P+ + Y +LI+ +   G 
Sbjct: 247 MIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGD 306

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           V  A ++L  M E+G   +  T+ +++ G C+ G++E+A  ++  +    +++++  Y +
Sbjct: 307 VCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGV 366

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C  G ++ A+ +   ML  G   +    N L+   CK G    AA  L  + +  
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
            KP+S  +  L++  C+    + AF+L DE+
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEM 457



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 3/189 (1%)

Query: 223 EVLKEMKKSQMSYP--NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           +++    K  MS P  N I Y+  I GLCK+    +   +  +++ K    PD  TY  L
Sbjct: 729 KIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKG-FCPDNYTYCSL 787

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I      GKV+ A  + + M N G  PN+  Y  L+NG CK G L  A+ +F+++    L
Sbjct: 788 IHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGL 847

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P  + Y TLI+ +C+ GR  EALEL  +M+E G     +T++ ++ GL  EGK E+++G
Sbjct: 848 SPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVG 907

Query: 401 MLEKLWYDG 409
           +L ++   G
Sbjct: 908 LLNEMMKAG 916



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 200/490 (40%), Gaps = 74/490 (15%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           Y T+LD   + + F     +  +M  +   F    +  L+K+  +    E  L +++ +H
Sbjct: 434 YNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMH 493

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
                 P+     T L+   +    D A    K +      K  T ++N +I   CK   
Sbjct: 494 K-RGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSIT-LYNTMICGFCKMEK 551

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L  A E+  +MK+     P+ ITY TLIDG CK G   EA++L ++M  +D I      Y
Sbjct: 552 LVQAQEIFLKMKELGFP-PDEITYRTLIDGYCKVGNLVEALKL-KDMSERDGISSSTEMY 609

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N LI G  R  ++ +   ++  MKN   +PNV  Y +L+ G+C +G + +A   + +M +
Sbjct: 610 NSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMID 669

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEA-----------------------------LELLK 368
             + P+ I  + +++   R G++DEA                             LE  K
Sbjct: 670 KGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQK 729

Query: 369 EMKERGCKA------DIVTFNIILGGLCRE------------------------------ 392
            +   G KA      + + +NI + GLC+                               
Sbjct: 730 IVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIH 789

Query: 393 -----GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
                GK+ EA  + + +   G+  N   Y  ++N  C+ G L++A  L   +  +G  P
Sbjct: 790 ACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSP 849

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N L+   CK G   +A      + E G  P S +++ L+  +    K   +  LL
Sbjct: 850 TVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLL 909

Query: 508 DELVIKESGT 517
           +E++    G+
Sbjct: 910 NEMMKAGKGS 919


>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
 gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
          Length = 564

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 162/277 (58%), Gaps = 1/277 (0%)

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           S P+ + Y  +I GL  +    EA+ +F E+  +   + DA+TY   IDG C+ G +D A
Sbjct: 251 SVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNV-DAVTYTTAIDGLCKMGCIDEA 309

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           ++I   M + G  PN + Y +L+  +CK G  + A++V+DEM    LK  T+    L+  
Sbjct: 310 RQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTG 369

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           FC  GRVDEAL + +EM ++G + D++T+NI++ GLC+ G++ EA+ + E+L   G+  +
Sbjct: 370 FCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPS 429

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
            +++  +++  C++G+++ A+ELL++M  +G  P    ++ ++   CKA   ED    L 
Sbjct: 430 VSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGMAWLA 489

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G+++   KP   ++  LVEL+    ++  A  +L+ +
Sbjct: 490 GMLKKNLKPREHTFNSLVELLSSSGRVDDALLVLNTM 526



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 160/337 (47%), Gaps = 4/337 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PSL+A++  +   + + + DL        +       +      L++     G       
Sbjct: 147 PSLRALNFAMRSALRAARPDLVFRLFSAFSSSPDFPGDAATVAFLVRACSAEGRPLDGLR 206

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L++  +  +  P L   + L+        F +  E    M++   + PD + Y  +I G
Sbjct: 207 LLRDGARRGVP-PQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSV-PDTVIYQRIIHG 264

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
                    A ++   +K  G N +   YTT ++G CK G + EA+++++EM +  ++P+
Sbjct: 265 LFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPN 324

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y +L+  +C+AG  + A ++  EM  +G K   V+ NI++ G C  G+++EALGM E
Sbjct: 325 EYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFE 384

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   GI  +  +Y I++   C+ G L +AI++   +L  G  P  +T   L+  +C+ G
Sbjct: 385 EMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEG 444

Query: 464 MAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRK 499
              DAA+ L  ++   G +P +     ++   C+ R+
Sbjct: 445 QV-DAAVELLKVMHAKGLEPLARINDSIINGFCKARR 480



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 146/311 (46%), Gaps = 38/311 (12%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +   I   CK G ++ A ++  EM    M  PN   Y +L+   CK G F  A ++
Sbjct: 289 DAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGME-PNEYAYCSLVAYYCKAGDFEMARKV 347

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           ++EM+ K  +    ++ N+L+ GFC  G+VD A  + E M   G   +V  Y  L+ G C
Sbjct: 348 YDEMLGKG-LKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLC 406

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G+L EA +V++++ +  L+P    +T LI+  C  G+VD A+ELLK M  +G +    
Sbjct: 407 KAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLAR 466

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
             + I+ G C+  + E+ +      W  G                              M
Sbjct: 467 INDSIINGFCKARRPEDGMA-----WLAG------------------------------M 491

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L +   P   T N L+  L  +G  +DA + L  + ++G +  S +  +LVE +C G KL
Sbjct: 492 LKKNLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKIGHELGSLACTMLVEQLCTG-KL 550

Query: 501 LFAFELLDELV 511
            ++ EL + LV
Sbjct: 551 CYSHELENILV 561



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 145/313 (46%), Gaps = 40/313 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +FN + + +G+N +  TY T +D L +    +    +  +M  +  + +E  + +L+
Sbjct: 274 ALRVFNEI-KLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLV 332

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
            ++  C   +   EM  K++     K                                  
Sbjct: 333 AYY--CKAGD--FEMARKVYDEMLGK---------------------------------G 355

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LK +T   NIL+   C  G ++ A  + +EM K  + + ++ITY+ LI GLCK GR  EA
Sbjct: 356 LKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEH-DVITYNILIQGLCKAGRLSEA 414

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           I+++E+++S   + P   T+  LID  C  G+VD A ++++ M   G  P      +++N
Sbjct: 415 IQVYEQLLSSG-LEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIIN 473

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK  + ++       M    LKP    + +L+     +GRVD+AL +L  M + G + 
Sbjct: 474 GFCKARRPEDGMAWLAGMLKKNLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKIGHEL 533

Query: 378 DIVTFNIILGGLC 390
             +   +++  LC
Sbjct: 534 GSLACTMLVEQLC 546



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 118/277 (42%)

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           +P+L   +  +    +  R      LF    S      DA T   L+      G+     
Sbjct: 146 HPSLRALNFAMRSALRAARPDLVFRLFSAFSSSPDFPGDAATVAFLVRACSAEGRPLDGL 205

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +++      G  P +     L+  F       +  E    M      PDT+ Y  +I+  
Sbjct: 206 RLLRDGARRGVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGL 265

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
                  EAL +  E+K RG   D VT+   + GLC+ G I+EA  +  ++   G+  N+
Sbjct: 266 FAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNE 325

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  ++ + C+ G+ E A ++   ML +G      + N L+   C  G  ++A      
Sbjct: 326 YAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEE 385

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +V+ G + +  ++ +L++ +C+  +L  A ++ ++L+
Sbjct: 386 MVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLL 422



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 104/270 (38%), Gaps = 1/270 (0%)

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           +DG        +A +  E + S+  I P     N  +    R  + D   ++     ++ 
Sbjct: 120 VDGFLIQLWPPDAADAAEVLASRLGIHPSLRALNFAMRSALRAARPDLVFRLFSAFSSSP 179

Query: 305 CNP-NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
             P +      L+     EG+  +   +  +     + P       L+  F  A    + 
Sbjct: 180 DFPGDAATVAFLVRACSAEGRPLDGLRLLRDGARRGVPPQLDAVADLVAAFSAAANFGKV 239

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            E L  M   G   D V +  I+ GL       EAL +  ++   G  ++  +Y   ++ 
Sbjct: 240 SETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDG 299

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G +++A ++   M+ +G  P+      L+   CKAG  E A      ++  G K  
Sbjct: 300 LCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKES 359

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
           + S  +LV   C   ++  A  + +E+V K
Sbjct: 360 TVSCNILVTGFCTHGRVDEALGMFEEMVKK 389


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 215/430 (50%), Gaps = 14/430 (3%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF     T+  +L  L A  +  +A+D VLR+MT  +C         L+K   + +  
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174

Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH----LRLKP 200
           +  LE+ H +         P + + +T +N   +    D A     YS  H     R+ P
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA-----YSTYHEMLDRRISP 229

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   ++ +I   CK   ++ A EVL  M K+ +  PN +TY++++ G C + + +EAI  
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV-MPNCMTYNSILHGYCSSEQPKEAIGF 288

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            ++M S D + PD +TYN L+D  C+ G+   A+KI + M   G  P++  Y TL+ G+ 
Sbjct: 289 LKKMRS-DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +G L E   + D M    + PD   +  LI  + +  +VDEA+ +  +M++ G   ++V
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+  ++G LC+ G +++A+   E++  +G+  N   Y  +++  C   + +KA EL+  M
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L RG   +    N ++   CK G   ++      +V +G KP   +++ L++  C   K+
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 501 LFAFELLDEL 510
             A +LL  +
Sbjct: 528 DEATKLLSSM 537



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 201/423 (47%), Gaps = 12/423 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY +++D L +  +      +   MT    +     +  L++ ++       +
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT---KGAL 352

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +EM   +  + R    P     +  +    +  +VD A        QH  L PN   +  
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQH-GLNPNVVTYGA 411

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK G+++ A    ++M    ++ PN+I Y++LI  LC   ++ +A EL  EM+ +
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLT-PNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I  + + +N +I   C+ G+V  ++K+ + M   G  PNV  Y+TL++G+C  GK+ E
Sbjct: 471 G-ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++   M +  +KPD + Y TLIN +CR  R+D+AL L KEM   G   +I+T+NIIL 
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL    +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + + +       
Sbjct: 590 GLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N ++  L K G  ++A          G  P   ++ L+ E I  G+ LL   E L
Sbjct: 650 ETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII-GQGLL---EEL 705

Query: 508 DEL 510
           D+L
Sbjct: 706 DQL 708



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 167/314 (53%), Gaps = 3/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           P+     IL+K  C     + A E+L  M   +   S P++++Y+T+I+G  K G   +A
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              + EM+ + +I PD +TY+ +I   C+G  +D+A +++  M  NG  PN   Y ++++
Sbjct: 216 YSTYHEMLDR-RISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C   + +EA     +M++  ++PD + Y +L++  C+ GR  EA ++   M +RG + 
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI T+  +L G   +G + E   +L+ +  +GI+ +   + I++    ++ ++++A+ + 
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P+  T   ++  LCK+G  +DA +    +++ G  P    +  L+  +C  
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIF 454

Query: 498 RKLLFAFELLDELV 511
            K   A EL+ E++
Sbjct: 455 DKWDKAEELILEML 468



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 206/425 (48%), Gaps = 14/425 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +IF++++ ++G   + ATY T+L   A       + A+L  M          +F  L+
Sbjct: 320 ARKIFDSMT-KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             ++     +  + +F K+  H +    P++      + +L +S  VD A   + Y  Q 
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGL---NPNVVTYGAVIGILCKSGSVDDA---MLYFEQM 432

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   L PN  ++  LI   C     + A E++ EM    +   N I ++++I   CK GR
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL-NTIFFNSIIHSHCKEGR 491

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             E+ +LF+ MV +  + P+ +TY+ LIDG+C  GK+D A K++  M + G  P+   Y 
Sbjct: 492 VIESEKLFDLMV-RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+NG+C+  ++ +A  +F EM +  + P+ I Y  ++       R   A EL   + + 
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G  ++A
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 670

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV-E 492
            +L       G +P+Y T   +   +   G+ E+     F + + G   +S     +V E
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRE 730

Query: 493 LICRG 497
           L+ RG
Sbjct: 731 LLQRG 735



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 39/282 (13%)

Query: 269 QILPDALTYNVLIDGFCRGGKVD--------------------------------RAKKI 296
           ++ P   TY +LI   CR G++D                                R    
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 297 MEF----MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYTT 349
           M+     M    C P+VF+ T L+ G C E + QEA E+   M   +     PD + YTT
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +IN F + G  D+A     EM +R    D+VT++ I+  LC+   +++A+ +L  +  +G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N  +Y  +L+  C   + ++AI  L+ M   G  P   T N L+  LCK G + +A 
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                + + G +P+  ++  L++       L+    LLD +V
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 130/266 (48%), Gaps = 3/266 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KPN   ++ LI  +C  G ++ A ++L  M    M  P+ +TY+TLI+G C+  R  +A
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK-PDCVTYNTLINGYCRVSRMDDA 565

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF+EMVS   + P+ +TYN+++ G     +   AK++   +  +G    +  Y  +++
Sbjct: 566 LALFKEMVSSG-VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILH 624

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK     EA  +F  +    L+ +T  +  +I    + GR DEA +L       G   
Sbjct: 625 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVP 684

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +  T+ ++   +  +G +EE   +   +  +G  ++      ++    Q+GE+ +A   L
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAG 463
            ++  + F    +T++ L + L   G
Sbjct: 745 SMIDEKHFSLEASTAS-LFIDLLSGG 769


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 166/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L+  F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +   ++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-SDVYTYSVLINGLCKASKMDDANELFDEMLD-NGLVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+  +VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++   ++LL+ M   G++P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 172/318 (54%), Gaps = 16/318 (5%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQM--------------SYP-NLITYSTLIDGLCKNG 252
           LIK H  R   ++  +VL+ + K +                YP +L  ++ L+    K G
Sbjct: 91  LIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
             R A  +F+  ++K  + P  +++N L++G+ + G +D   ++   M+ +G   +V+ Y
Sbjct: 151 EIRLAQSVFDA-ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTY 209

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           + L+NG CK  K+ +A E+FDEM +  L P+ + +TTLI+  C+  RVD A+E+ K+M  
Sbjct: 210 SVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLS 269

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +    D++T+N ++ GLC++G +++A  +++++   G+  +K +Y  +++ +C++G+LE 
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A E  + M+             L+  LC+ G + DA   L  ++ +G KPE  ++ +++ 
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389

Query: 493 LICRGRKLLFAFELLDEL 510
             C    +    +LL E+
Sbjct: 390 EFCEKGDVWTGLKLLKEM 407



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 157/314 (50%), Gaps = 10/314 (3%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFN 311
           R+AIE +  +      +P      VL        K+   K +  F + +   G   +++ 
Sbjct: 83  RDAIECYRLIKEHKFRVPFDTCRKVLEHLM----KLKYFKLVWGFYEESLECGYPASLYF 138

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L   M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
             G ++D+ T+++++ GLC+  K+++A  + +++  +G+  N  ++  +++  C+   ++
Sbjct: 199 ASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVD 258

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  ++  L+
Sbjct: 259 VAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 492 ELICRGRKLLFAFE 505
           +  C+   L  AFE
Sbjct: 319 DGNCKEGDLETAFE 332


>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 217/446 (48%), Gaps = 46/446 (10%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           ++P  A   F    +QK + HN   Y +++D LA  K  + +    R ++ E  KF   +
Sbjct: 112 EKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI----RFVSSEIKKFEFPM 167

Query: 133 FLN----LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            ++    L+K F    + E +L ++ K+     E P+L   +  +N L+ +  VD A+  
Sbjct: 168 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIE-PTLYTYNFLMNGLVSAMFVDSAERV 226

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-----KKSQMSYPNLI---- 239
            +      R+KP+   +N +IK +CK G  + A E L++M     +  +++Y  +I    
Sbjct: 227 FEVMESG-RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 285

Query: 240 -------------------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
                                     +S +I GLCK G+  E   +FE M+ K    P+ 
Sbjct: 286 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNV 344

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
             Y VLIDG+ + G V+ A +++  M + G  P+V  Y+ ++NG CK G+++EA + F  
Sbjct: 345 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 404

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
            +   L  +++ Y++LI+   +AGRVDEA  L +EM E+GC  D   +N ++    +  K
Sbjct: 405 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 464

Query: 395 IEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++EA+ + +++   +G      +Y I+L+   ++   E+A++L  +M+ +G  P  A   
Sbjct: 465 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFR 524

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMG 479
            L   LC +G    A   L  L  MG
Sbjct: 525 ALSTGLCLSGKVARACKILDELAPMG 550



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 8/301 (2%)

Query: 173 LNLLIESNQV----DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           ++ +++S+++    D+A +F  +S +  +   N   +  L+        ++    V  E+
Sbjct: 101 VSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEI 160

Query: 229 KKSQMSYPNLITYS-TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           KK    +P  ++ +  LI    K G   E + ++ +M  ++ I P   TYN L++G    
Sbjct: 161 KK--FEFPMTVSAANALIKSFGKLGMVEELLWVWRKM-KENGIEPTLYTYNFLMNGLVSA 217

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
             VD A+++ E M++    P++  Y T++ G+CK G+ Q+A E   +M+    + D I Y
Sbjct: 218 MFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITY 277

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            T+I            + L +EM E+G +     F++++GGLC+EGK+ E   + E +  
Sbjct: 278 MTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIR 337

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G   N A Y ++++   + G +E AI LL  M+  GF P   T + ++  LCK G  E+
Sbjct: 338 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 397

Query: 468 A 468
           A
Sbjct: 398 A 398



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 39/283 (13%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN  I+ +LI  + K G++E A  +L  M       P+++TYS +++GLCKNGR  EA+
Sbjct: 341 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK-PDVVTYSVVVNGLCKNGRVEEAL 399

Query: 259 E-----------------------------------LFEEMVSKDQILPDALTYNVLIDG 283
           +                                   LFEEM S+     D+  YN LID 
Sbjct: 400 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDA 458

Query: 284 FCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           F +  KVD A  + + M+   GC+  V+ YT L++G  KE + +EA +++D M +  + P
Sbjct: 459 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 518

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
               +  L    C +G+V  A ++L E+   G   D    ++I   LC+ G+I+EA  + 
Sbjct: 519 TAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLA 577

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + +   G  +      +++N   + G+ + A++L+   +  G+
Sbjct: 578 DGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 620


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 157/291 (53%), Gaps = 2/291 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    F IL+   CK   L  AFE+++ M + +  +PN + ++ ++D LCK GR  EA  
Sbjct: 8   PTVVTFGILVDGLCKANRLTDAFELVEVMAE-RGCFPNALVFNGIMDALCKEGRSAEAYG 66

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             E M S   + P  +TYN+LIDGFC+  K+ RA +I++ M   G  PN   Y T ++G 
Sbjct: 67  YIETMRSMG-VSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGL 125

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK GK+ +A  +F  M    ++ D  GYTTLI+  C+AG++ EA  LL EM+  GC    
Sbjct: 126 CKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKP 185

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N IL  LC+  +I EA  + +++   GI  +  ++ +++   C+   ++ A+ LL+ 
Sbjct: 186 GCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQ 245

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           M   G  P     N L+  L +AG   +A   L  ++  G  P S ++AL+
Sbjct: 246 MKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 148/276 (53%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P ++T+  L+DGLCK  R  +A EL E M  +    P+AL +N ++D  C+ G+   A  
Sbjct: 8   PTVVTFGILVDGLCKANRLTDAFELVEVMAERG-CFPNALVFNGIMDALCKEGRSAEAYG 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
            +E M++ G +P +  Y  L++GFCKE KL  A E+  EM     +P+ + Y T ++  C
Sbjct: 67  YIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+VD+AL L + M E+  + D+  +  ++ GLC+ GK+ EA  +L+++   G      
Sbjct: 127 KYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPG 186

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  +L++ C+   + +A +L + M   G LP + T   ++   C+    +DA + L  +
Sbjct: 187 CYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQM 246

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              G  P    +  L++ + R  ++  A+ LL E++
Sbjct: 247 KSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMI 282



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 126/227 (55%), Gaps = 2/227 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + + + P    +NILI   CK   L  A E+L+EM   +   PN +TY+T + GLCK G+
Sbjct: 72  RSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEM-TGRGHEPNHVTYNTFLHGLCKYGK 130

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+ LF  M  K +I  D   Y  LIDG C+ GK+  A  +++ M+N+GC P    Y 
Sbjct: 131 VDDALALFRAMTEK-KIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYN 189

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            +++  CK  ++ EA ++F  M    + PD + +  ++  +CR  R+D+AL LL++MK  
Sbjct: 190 AILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSA 249

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           G     V +N ++  L R G++ EA  +L+++   G+  N  +Y ++
Sbjct: 250 GLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 128/240 (53%)

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +P  +T+ +L+DG C+  ++  A +++E M   GC PN   +  +M+  CKEG+  EA  
Sbjct: 7   IPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYG 66

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
             + M++  + P  + Y  LI+ FC+  ++  ALE+L+EM  RG + + VT+N  L GLC
Sbjct: 67  YIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLC 126

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + GK+++AL +   +    I L+   Y  +++  CQ G+L +A  LL  M   G +P   
Sbjct: 127 KYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPG 186

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             N +L  LCK     +A      +   G  P+  ++ ++V   CRG ++  A  LL ++
Sbjct: 187 CYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQM 246



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 104/212 (49%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC P V  +  L++G CK  +L +A E+ + M      P+ + +  +++  C+ GR
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             EA   ++ M+  G    IVT+NI++ G C+E K+  AL +L+++   G   N  +Y  
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
            L+  C+ G+++ A+ L R M  +           L+  LC+AG   +A   L  +   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
             P+   +  ++  +C+G ++  A +L   + 
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMT 212



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 37/187 (19%)

Query: 370 MKERGCKADIVTFNIILGG-----------------------------------LCREGK 394
           M E+GC   +VTF I++ G                                   LC+EG+
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
             EA G +E +   G+     +Y I+++  C++ +L +A+E+L+ M  RG  P++ T N 
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            L  LCK G  +DA      + E   + +   +  L++ +C+  KL  A+ LLDE+  + 
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEM--EN 178

Query: 515 SGTIQVP 521
           SG +  P
Sbjct: 179 SGCVPKP 185


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 219/487 (44%), Gaps = 42/487 (8%)

Query: 65  AISLIKCEKEPQCALEIFN-TVSEQKG---FNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           A S   C   P  A+ +FN   S  +G    +  + TYA ++D   R  + E   A   Q
Sbjct: 79  APSSAACGSGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQ 138

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           +     +    I  +L+K F      +  L++     P     P + + +  L  L    
Sbjct: 139 LLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQG 198

Query: 181 QVDLAQNFLKYSNQHLRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +   A + L+   +   +  P+   +N +I    K G +  A ++ KEM +  +  P+L+
Sbjct: 199 KSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP-PDLV 257

Query: 240 TYSTLIDGLCK-----------------------------------NGRFREAIELFEEM 264
           TYS+++  LCK                                    G+++EA+ +F+EM
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  ILPD +  N L+   C+ GK+  A+ + + M   G NP+VF+YT ++NG+  +G 
Sbjct: 318 -RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +  ++FD M    + PD   +  LI  +   G +D+A+ +  EM++ G K  +VT+  
Sbjct: 377 LVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR GK+++A+    ++   G+  +K +Y  ++   C  G L KA EL+  ++  G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                     ++  LCK G   DA       V +G  P++  + +L++  C   K+  A 
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556

Query: 505 ELLDELV 511
            + D +V
Sbjct: 557 RVFDAMV 563



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 218/475 (45%), Gaps = 76/475 (16%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY++++  L + +  +  +A LRQM  +        + NL+  +S+    +
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 308

Query: 148 RVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNF-----LKYSNQHL---- 196
             + +F ++    R+   P + A++T +  L +  ++  A++      +K  N  +    
Sbjct: 309 EAVRVFKEMR---RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365

Query: 197 -------------------------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     + P+   FN+LIK +   G L+ A  +  EM+  
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 425

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  P+++TY T+I  LC+ G+  +A+E F +M+ +  ++PD   Y+ LI GFC  G + 
Sbjct: 426 GVK-PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG-VVPDKYAYHCLIQGFCTHGSLL 483

Query: 292 RAKKIMEFMKNNG-----------------------------------CNPNVFNYTTLM 316
           +AK+++  + NNG                                    +P+   Y  LM
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+C  GK+++A  VFD M +  ++P+ +GY TL+N +C+ GR+DE L L +EM ++G K
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
              + +NII+ GL   G+   A     ++   GI +NK +Y IVL    +    ++AI L
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            + +          T N ++  + +    E+A      +   G  P + ++++++
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 175/363 (48%), Gaps = 36/363 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P L   S+ ++ L ++  +D A+ FL+       L P+   +N LI  +   G  + A  
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL-PDNWTYNNLIYGYSSTGQWKEAVR 312

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK---------------- 267
           V KEM++ Q   P+++  +TL+  LCK G+ +EA ++F+ M  K                
Sbjct: 313 VFKEMRR-QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGY 371

Query: 268 ------------------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
                             D I PD  T+NVLI  +   G +D+A  I   M+++G  P+V
Sbjct: 372 ATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHV 431

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y T++   C+ GK+ +A E F++M +  + PD   Y  LI  FC  G + +A EL+ E
Sbjct: 432 VTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISE 491

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           +   G + DIV F  I+  LC+ G++ +A  + +     G++ +   Y ++++  C  G+
Sbjct: 492 IMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 551

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +EKA+ +   M+  G  P+      L+   CK G  ++       +++ G KP +  + +
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611

Query: 490 LVE 492
           +++
Sbjct: 612 IID 614



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 211/410 (51%), Gaps = 11/410 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+T++  KG N +  +Y  +L+  A       +  +   M  +        F  L+
Sbjct: 345 ARDVFDTMA-MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 403

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQ 194
           K ++NC + ++ + +F+++  H +   KP +    T +  L    ++D A + F +  +Q
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGV---KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            +   P+   ++ LI+  C  G+L  A E++ E+  + M   +++ + ++I+ LCK GR 
Sbjct: 461 GV--VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL-DIVFFGSIINNLCKLGRV 517

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  +F+  V+   + PDA+ YN+L+DG+C  GK+++A ++ + M + G  PNV  Y T
Sbjct: 518 MDAQNIFDLTVNVG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G++ E   +F EM    +KP TI Y  +I+    AGR   A     EM E G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +  T++I+L GL +    +EA+ + ++L    + ++  +   ++    Q   +E+A 
Sbjct: 637 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 696

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +L   +   G +P   T + ++  L K G+ E+A      +   G +P+S
Sbjct: 697 DLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 170/397 (42%), Gaps = 44/397 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IFN + +  G   +  TY T++  L R  K +       QM  +     +  +  L+
Sbjct: 415 AMIIFNEMRDH-GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQH 195
           + F  C+ H  +L+    I  I      L  +   + +N L +  +V  AQN    +  +
Sbjct: 474 QGF--CT-HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT-VN 529

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P+  ++N+L+  +C  G +E A  V   M  + +  PN++ Y TL++G CK GR  
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE-PNVVGYGTLVNGYCKIGRID 588

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT-- 313
           E + LF EM+ K  I P  + YN++IDG    G+   AK     M  +G   N   Y+  
Sbjct: 589 EGLSLFREMLQKG-IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 314 ---------------------------------TLMNGFCKEGKLQEAKEVFDEMKNFLL 340
                                            T++ G  +  +++EAK++F  +    L
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P  + Y+ +I    + G V+EA ++   M+  GC+ D    N ++  L ++ +I  A  
Sbjct: 708 VPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 767

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            L K+      L   +  ++++    KG   + I  L
Sbjct: 768 YLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF    S+ Q    + P + TY +L+D   R  + + A      +   G   +    
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 313 TTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           + L+ GFC+  +  EA ++           PD   Y  L+   C  G+  +A +LL+ M 
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211

Query: 372 ERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           E G  C  D+V +N ++ G  +EG + +A  + +++   GI  +  +Y  V++  C+   
Sbjct: 212 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 271

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           ++KA   LR M+ +G LP   T N L+      G  ++A      +      P+  +   
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A ++ D + +K
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMK 355


>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 231/480 (48%), Gaps = 44/480 (9%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-TYETC 126
           LI  +K    AL+ F   S    F H+ +TY T++ KL  +++F+ V  +L +M T    
Sbjct: 44  LILDQKTSSEALQTFRWASTFSKFTHSQSTYRTLIHKLCIFRRFDTVKQLLDEMPTSIGA 103

Query: 127 KFHEGIFLNLMKHFSNCSLHER---VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
              E IF+ +++  S   +  R   VL++ +K H      PSLK  ++ L++L++ + +D
Sbjct: 104 NPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHG----TPSLKIFNSILDVLVKED-ID 158

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
           +A+ F + S     ++ +   F IL+K  C    +   F++L+ +K + ++ PN + Y+T
Sbjct: 159 MAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVT-PNTVIYNT 217

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQI------------------------------LPD 273
           L+  LC+NG+   A  L  EMV  +++                              +PD
Sbjct: 218 LLHALCRNGKVGRARSLMNEMVDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPD 277

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +T   +++  C  G+V  A +++E +++ G + +   Y TL+ GFC  GK++       
Sbjct: 278 VVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLK 337

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           +M+N    P+   Y  LI  FC +  +D AL+L  +MK  G   + VTF+ ++ GLC EG
Sbjct: 338 QMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEG 397

Query: 394 KIEEALGMLEKL--WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +IE+   +LE +    +G   + + Y  ++    ++   ++A E L  M      P    
Sbjct: 398 RIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKM--GKLFPRAVD 455

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            +  +++ CK G  EDA      +++ G  P    +  LV    +   +  A EL++E++
Sbjct: 456 RSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMI 515



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 154/310 (49%), Gaps = 21/310 (6%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTC 203
           RV E    +  +     SL A++   N LI+      +V +  +FLK       L PN  
Sbjct: 293 RVTEAAEVLERVESLGGSLDAVA--YNTLIKGFCGVGKVKVGLHFLKQMENKGYL-PNVD 349

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +NILI   C+   L+ A ++  +MK   ++  N +T+ T+I GLC  GR  +   + E 
Sbjct: 350 TYNILIYGFCESRMLDLALDLFNDMKTDGINR-NFVTFDTMIRGLCSEGRIEDGFSILEL 408

Query: 264 M-----VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMN 317
           M      SK  I P    YN +I G  +  + D A    EF+   G   P   + +  + 
Sbjct: 409 MEETKEGSKGHISP----YNSIIYGLFKQNRFDEAS---EFLAKMGKLFPRAVDRSMTII 461

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CKEG +++AK ++D+M +    P  + Y +L++ F + G + EA+EL+ EM    C  
Sbjct: 462 QKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFP 521

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              TFN I+   C +GKIE AL  +E +   G   N  +Y  +++  C+KG+++KA+++ 
Sbjct: 522 IASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVF 581

Query: 438 RLMLCRGFLP 447
             M+ +G LP
Sbjct: 582 LEMVEKGILP 591



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 136/256 (53%), Gaps = 5/256 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +  +    ES  +DLA +          +  N   F+ +I+  C  G +E  F 
Sbjct: 346 PNVDTYNILIYGFCESRMLDLALDLFNDMKTD-GINRNFVTFDTMIRGLCSEGRIEDGFS 404

Query: 224 VLKEMKKSQMSYPNLIT-YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           +L+ M++++      I+ Y+++I GL K  RF EA E   +M    ++ P A+  ++ I 
Sbjct: 405 ILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKM---GKLFPRAVDRSMTII 461

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+ G ++ AK I + M + G  P++  Y +L++GF + G ++EA E+ +EM +    P
Sbjct: 462 QKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFP 521

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
               +  +I  FC  G+++ AL+ ++++  RGC  +  T++ ++  LCR+G I++AL + 
Sbjct: 522 IASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVF 581

Query: 403 EKLWYDGIYLNKASYR 418
            ++   GI  ++  ++
Sbjct: 582 LEMVEKGILPDQCIWK 597


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 169/317 (53%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN  I+  LI   CK+G +E A ++  EM K  +   N  TY+ LI GL KNG  ++ 
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL-VANEWTYTVLIHGLFKNGIKKQG 252

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E++E+M  +  + P+  TYN +++  C+ G+   A K+ + M+  G + N+  Y TL+ 
Sbjct: 253 FEMYEKM-QEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+E K  EA EV D+MK+  + P+ I Y TLI+ FC   ++ +AL L +++K RG   
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +VT+NI++ G C++G    A  +++++   GI  +K +Y I+++   +   +EKAI+L 
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P   T + L+   C  G   +A+     +VE  F+P    +  +V   C+ 
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491

Query: 498 RKLLFAFELLDELVIKE 514
                A  L  E+  KE
Sbjct: 492 GSSYRALRLFREMEEKE 508



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 193/348 (55%), Gaps = 3/348 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +T ++   +  +++ A++   +      L  N   + +LI    K G  +  FE
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLF-FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFE 254

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + ++M++  + +PNL TY+ +++ LCK+GR ++A ++F+EM  +  +  + +TYN LI G
Sbjct: 255 MYEKMQEHGV-FPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERG-VSCNIVTYNTLIGG 312

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            CR  K + A ++M+ MK++G NPN+  Y TL++GFC   KL +A  +  ++K+  L P 
Sbjct: 313 LCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPS 372

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  L++ FC+ G    A +++KEM+ERG K   VT+ I++    R   +E+A+ +  
Sbjct: 373 LVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRS 432

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G+  +  +Y ++++  C KG + +A  L + M+ + F P+    N +++  CK G
Sbjct: 433 SMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEG 492

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            +  A      + E    P   S+  ++E++C+ RK   A  L+++++
Sbjct: 493 SSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMI 540



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 171/299 (57%), Gaps = 6/299 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N ++   CK G  + AF+V  EM++  +S  N++TY+TLI GLC+  +  EA E
Sbjct: 266 PNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVS-CNIVTYNTLIGGLCREMKANEANE 324

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           + ++M S D I P+ +TYN LIDGFC   K+ +A  +   +K+ G +P++  Y  L++GF
Sbjct: 325 VMDQMKS-DGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+G    A +V  EM+   +KP  + YT LI+ F R+  +++A++L   M+E G   D+
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDV 443

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+++++ G C +G++ EA  + + +       N+  Y  ++   C++G   +A+ L R 
Sbjct: 444 HTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFRE 503

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           M  +   P+ A+   ++  LCK   +++A   +  +++ G  P SDS   ++ LI R +
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGP-SDS---ILNLISRAK 558



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 145/270 (53%), Gaps = 1/270 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           ++ ++  +I G C+ G   ++ +L  E+  +    P+ + Y  LIDG C+ G++++AK +
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVEL-REFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
              M   G   N + YT L++G  K G  ++  E++++M+   + P+   Y  ++N  C+
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCK 280

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            GR  +A ++  EM+ERG   +IVT+N ++GGLCRE K  EA  +++++  DGI  N  +
Sbjct: 281 DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLIT 340

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C   +L KA+ L R +  RG  P   T N L+   CK G    A   +  + 
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFEL 506
           E G KP   ++ +L++   R   +  A +L
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQL 430



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 144/304 (47%), Gaps = 16/304 (5%)

Query: 216 GTLESAF----EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI- 270
           G ++S F     +L  + +S+ S      Y  +I+   ++     +I  F EMV K  + 
Sbjct: 68  GKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVP 127

Query: 271 ----LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
                 + LT+ V    F +        KI   +       +V+++  ++ G C+ G+++
Sbjct: 128 GSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVL-------DVYSFGIVIKGCCEAGEIE 180

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           ++ ++  E++ F   P+ + YTTLI+  C+ G +++A +L  EM + G  A+  T+ +++
Sbjct: 181 KSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLI 240

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL + G  ++   M EK+   G++ N  +Y  V+N  C+ G  + A ++   M  RG  
Sbjct: 241 HGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVS 300

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            +  T N L+  LC+   A +A   +  +   G  P   ++  L++  C  RKL  A  L
Sbjct: 301 CNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSL 360

Query: 507 LDEL 510
             +L
Sbjct: 361 CRDL 364


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 205/418 (49%), Gaps = 24/418 (5%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           KFE   +++R+M  +        +  ++    N S  +    +F ++    +    +  +
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM----KSNHVVPDV 515

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            T   L+    +V L Q   K+ ++ +R    PN   +  LI  + K   + SA E+  E
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-E 574

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL---------------P 272
           M  S+   PN++TY+ LIDG CK+G+  +A +++  M     I                P
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           +  TY  L+DG C+  KV  A+ +++ M   GC PN   Y  L++GFCK GKL EA+ VF
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            +M      P+   Y++LI+   +  R+D AL++L  M E  C  +++ +  ++ GLC+ 
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           GK +EA  ++  +   G + N  +Y  +++   + G+++K +EL+R M  +G  P++ T 
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             L+   C AG+ +DA   L  + +  +      +  ++E     R+ + +  LLDE+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEI 870



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 171/330 (51%), Gaps = 18/330 (5%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  ++ +I   C    +++AF + +EMK + +  P++ TY+ LID  CK G  ++A +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV-VPDVFTYTILIDSFCKVGLLQQARK 536

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F+EMV +D   P+ +TY  LI  + +  K+  A ++ E M + GC PNV  YT L++G 
Sbjct: 537 WFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 320 CKEGKLQEAKEVFDEMKNF----------------LLKPDTIGYTTLINCFCRAGRVDEA 363
           CK G++++A +++  M+                  +  P+   Y  L++  C+A +V EA
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            +LL  M   GC+ + + ++ ++ G C+ GK++EA  +  K+   G   N  +Y  +++ 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             +   L+ A+++L  ML     P+     E++  LCK G  ++A   +  + E G  P 
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++  +++   +  K+    EL+ ++  K
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 22/369 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN----- 142
           + G   N  TY  ++    + +K  + + +   M  E C  +   +  L+          
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 143 --CSLHERV--------LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
             C ++ R+        ++M+ KI       P++      ++ L ++++V  A++ L   
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKN 251
           +     +PN  +++ LI   CK G L+ A  V  +M  S+  Y PN+ TYS+LID L K+
Sbjct: 663 SVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM--SERGYGPNVYTYSSLIDRLFKD 719

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R   A+++   M+ ++   P+ + Y  +IDG C+ GK D A ++M  M+  GC+PNV  
Sbjct: 720 KRLDLALKVLSRML-ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT +++GF K GK+ +  E+  +M      P+ + Y  LIN  C AG +D+A +LL EMK
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           +      +  +  ++ G  RE  I  +LG+L+++  +       +YRI+++  C+ G LE
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 432 KAIELLRLM 440
            A+EL + M
Sbjct: 897 LALELHKXM 905



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 11/324 (3%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + L  KP+   +N L++   +   L++A+ V +EM  S  +     T    +  LCK GR
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY-TLGCFVHLLCKAGR 282

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           +REA+ L E    K++   D + Y  +I G C     + A   +  M+++ C PNV  Y 
Sbjct: 283 WREALALIE----KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G  ++ +L   K +   M      P    + +LI+ +CR+G    A +LLK+M + 
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 374 GCKADIVTFNIILGGLCREGKIE--EALGMLEKLWYD----GIYLNKASYRIVLNFSCQK 427
           GC+   V +NI++GG+C   K+   + L + EK + +     + LNK +   +    C  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G+ EKA  ++R M+ +GF+P  +T ++++  LC A   ++A +    +      P+  ++
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
            +L++  C+   L  A +  DE+V
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMV 542



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 161/369 (43%), Gaps = 59/369 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR--EA 257
           P+  IFN LI  +C+ G    A+++LK+M       P  + Y+ LI G+C N +    + 
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQ-PGYVVYNILIGGICGNEKLPSLDV 425

Query: 258 IELFE----EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           +EL E    EM+    +L      N L    C  GK ++A  I+  M + G  P+   Y+
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++   C   K+  A  +F+EMK+  + PD   YT LI+ FC+ G + +A +   EM   
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  ++VT+  ++    +  K+  A  + E +  +G   N  +Y  +++  C+ G++EKA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 434 IE---------------------------------------------------LLRLMLC 442
            +                                                   LL +M  
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G  P++   + L+   CK G  ++A +    + E G+ P   +++ L++ + + ++L  
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724

Query: 503 AFELLDELV 511
           A ++L  ++
Sbjct: 725 ALKVLSRML 733



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 152/333 (45%), Gaps = 39/333 (11%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++D L +  K +    +L  M+ E C+ +  ++  L+  F      +    +F
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            K+       P++   S+ ++ L +  ++DLA   L    ++    PN  I+  +I   C
Sbjct: 695 TKMSE-RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIYTEMIDGLC 752

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G  + A+ ++  M++ +  +PN++TY+ +IDG  K G+  + +EL  +M +K    P+
Sbjct: 753 KVGKTDEAYRLMSMMEE-KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG-CAPN 810

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKN------------------------------- 302
            +TY VLI+  C  G +D A ++++ MK                                
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI 870

Query: 303 --NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN--FLLKPDTIGYTTLINCFCRAG 358
             N   P +  Y  L++ FCK G+L+ A E+   M +       D   Y++LI     A 
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           +VD+A EL  +M +RG   ++  F  ++ GL R
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 3/191 (1%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G    A E    +K+   KP  + Y  L+  F  A R+D A  + +EM + G   D 
Sbjct: 208 CRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDG 267

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T    +  LC+ G+  EAL ++EK   +   L+   Y  +++  C+    E+A++ L  
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSR 324

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M     +P+  T   LL    +          L  ++  G  P    +  L+   CR   
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 500 LLFAFELLDEL 510
             +A++LL ++
Sbjct: 385 YSYAYKLLKKM 395


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 224/441 (50%), Gaps = 19/441 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-------TYETCKFHE 130
           AL++FN ++++ G   N  TY+T+++ L    +      ++R+M       T  TC    
Sbjct: 269 ALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT--- 324

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           G  + L     +   +E    +F  +     E P++   +  ++ L  S  + +A     
Sbjct: 325 GPIIAL----CDMGCYEDAWRLFVDMKNKGCE-PNVYTYTALISGLCVSGLLKVAIGLFH 379

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
             ++   + PNT  +N LI    +   ++ AF VL  M ++  S PN++TY+ +I G C 
Sbjct: 380 RMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS-PNIVTYNEMIKGYCI 437

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G  ++A+ +   M+ +     + +TYN +I G+C  G    A +I++ M++ GC P+ +
Sbjct: 438 LGDPKKAMLVMNNMLQRGHS-ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +YT L+ GFCK  K++ A  +F+EM +  L P+ + YT LI+ +C+  ++D A  LL+ M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           K  GC+ ++ T+N+++ GL ++     A  + + +  +GI+ N  +Y  +++  C+ G  
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+E+   M+ +G LP+  T + L+  L + G  E+A      L   G  P+  ++  +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676

Query: 491 VELICRGRKLLFAFELLDELV 511
           +E      K+  AF  L  ++
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMI 697



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 212/437 (48%), Gaps = 22/437 (5%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q  L I+N V      + N A   TI+ K+     FE+      +M+ +T  +   I  +
Sbjct: 212 QPNLLIYNAVINALCKDGNVADAETIMKKV-----FES------EMSPDTFTYTSMILGH 260

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             KH  + +L     ++F+++     E P+    ST +N L +S +V+ A + ++    H
Sbjct: 261 CRKHDLDSAL-----QVFNQMAKEGCE-PNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 196 LRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
             L   +TC   I+    C  G  E A+ +  +MK      PN+ TY+ LI GLC +G  
Sbjct: 315 GILPTAHTCTGPIIAL--CDMGCYEDAWRLFVDMKNKGCE-PNVYTYTALISGLCVSGLL 371

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           + AI LF  M S+D + P+ +TYN LI+      ++  A  ++  M  NGC+PN+  Y  
Sbjct: 372 KVAIGLFHRM-SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G+C  G  ++A  V + M       + + Y T+I  +C +G    AL +L  M++ G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           CK D  ++  ++ G C+  K+E A G+  ++  DG+  N+ +Y  +++  C+  +L+ A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            LL  M   G  P+  T N L+  L K      A      ++E G  P   ++  +++ +
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 495 CRGRKLLFAFELLDELV 511
           C+      A E+ ++++
Sbjct: 611 CKNGSTSLALEMFNKMI 627



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 136/256 (53%), Gaps = 2/256 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N +IK +C  G   SA  +L  M+      P+  +Y+ LI G CK  +   A  L
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK-PDEWSYTELICGFCKISKMESAFGL 517

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F EMV  D + P+ +TY  LIDG+C+  K+D A  ++E MK +GC PNV  Y  L++G  
Sbjct: 518 FNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+     A+E+   M    + P+ + YT +I+  C+ G    ALE+  +M E+GC  +++
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++  L +EGK+EEA  +  +L   G+  ++ +Y  ++      G++E A   L  M
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 441 LCRGFLPHYATSNELL 456
           +  G  P   T   L+
Sbjct: 697 IKAGCQPTLWTYGVLI 712



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 151/304 (49%), Gaps = 2/304 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ L+ H  + G   +  +    M  S+   PNL+ Y+ +I+ LCK+G   +A E   + 
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRML-SEGVQPNLLIYNAVINALCKDGNVADA-ETIMKK 240

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V + ++ PD  TY  +I G CR   +D A ++   M   GC PN   Y+TL+NG C  G+
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA ++  EM    + P     T  I   C  G  ++A  L  +MK +GC+ ++ T+  
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC  G ++ A+G+  ++  DG++ N  +Y  ++N   +   ++ A  +L LM   G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+  T NE++   C  G  + A + +  +++ G      ++  +++  C       A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 505 ELLD 508
            +LD
Sbjct: 481 RILD 484



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M+S+  +      Y+ L+    R G           M + G  PN+  Y  ++N  C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+G + +A+ +  ++    + PDT  YT++I   CR   +D AL++  +M + GC+ + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++ GLC  G++ EA  ++ ++   GI     +    +   C  G  E A  L   M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRK 499
             +G  P+  T   L+  LC +G+ +  AI LF  +   G  P + ++  L+ ++   R+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLK-VAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 500 LLFAFELLD 508
           + +AF +L+
Sbjct: 406 IKYAFVVLN 414



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 196/447 (43%), Gaps = 29/447 (6%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P+ A+ + N +  Q+G + N  TY TI+          +   +L  M    CK  E  +
Sbjct: 440 DPKKAMLVMNNML-QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             L+  F   S  E    +F+++       P+    +  ++   +  ++D A + L++  
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +    +PN   +N+LI    K+     A E+ K M +  + +PN++TY+ +IDGLCKNG 
Sbjct: 558 RS-GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI-FPNVVTYTAMIDGLCKNGS 615

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              A+E+F +M+ +   LP+ LTY+ LI    + GKV+ A+ +   ++ +G  P+   Y 
Sbjct: 616 TSLALEMFNKMIEQG-CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI---------------------- 351
            ++  +   GK++ A      M     +P    Y  LI                      
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVP 734

Query: 352 NC-FCRAGRVDEALELLK-EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           NC F       +A+ ++  ++ E      +   N ++  L   G+  EA  +L  +   G
Sbjct: 735 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 794

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  ++ +Y  +L    +   ++ A+ + + M  +G   H     EL+  LC+    ++A 
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEAR 854

Query: 470 IALFGLVEMGFKPESDSWALLVELICR 496
           I    ++   + P+    A+L++ + R
Sbjct: 855 ITFENMLMRTWNPDDVVQAVLIDGLLR 881



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 100/219 (45%)

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
           R    ++ +  +G    +F Y+ L+    + G      + +  M +  ++P+ + Y  +I
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+ G V +A  ++K++ E     D  T+  ++ G CR+  ++ AL +  ++  +G  
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y  ++N  C  G + +A +L+R M+  G LP   T    ++ LC  G  EDA   
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +   G +P   ++  L+  +C    L  A  L   +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           + L+  L   GR+ EA EL   M+S+  + PD   YN L+    R   VD A  + + M 
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQG-LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC  ++  Y  L+   C+  + +EA+  F+ M      PD +    LI+   R G  D
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 362 EALELLKEMKER 373
             +E L  M+ R
Sbjct: 887 LCMEFLHIMETR 898



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 26/149 (17%), Positives = 67/149 (44%)

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           +  L  + + G +  +  ++ +L  L R G     +    ++  +G+  N   Y  V+N 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G +  A  +++ +      P   T   +++  C+    + A      + + G +P 
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVI 512
           + +++ L+  +C   ++  AF+L+ E+++
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMIL 313


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 149/254 (58%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L   F++   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQ-PDVYTYSVLINGLCKESKMDDA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELFEEM+ K  ++P+ +T+  LIDG C+ G+VD A ++ + M +    P++  Y TL+ 
Sbjct: 226 NELFEEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L +A ++ DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 285 GLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  M+ ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLL 404

Query: 438 RLMLCRGFLPHYAT 451
           + M   G  P   T
Sbjct: 405 KEMQRDGHAPSVVT 418



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  ++YN L++G+ R G ++ 
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRLAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLNE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             K+   M  +G  P+V+ Y+ L+NG CKE K+ +A E+F+EM    L P+ + +TTLI+
Sbjct: 190 GFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G + +A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   +
Sbjct: 310 DKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMM 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++  G KP++ ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 407



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVS-----------------KDQILPDALTYNV 279
            L +Y T+I  LC +  F EA  L + +VS                 K     D   ++ 
Sbjct: 12  TLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIYVFSG 71

Query: 280 LIDGFCRGG-------------------KVDRAKKIMEFMKN----------------NG 304
           LI  +   G                     D  KK++E +                   G
Sbjct: 72  LITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECG 131

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCKEG ++ A+ VFD +  + L+P  + Y TL+N + R G ++E  
Sbjct: 132 YPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGF 191

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +L   M   G + D+ T+++++ GLC+E K+++A  + E++   G+  N  ++  +++  
Sbjct: 192 KLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGH 251

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +  LP   T N L+  LCK G    A   +  +   G KP+ 
Sbjct: 252 CKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDK 311

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 312 ITYTTLIDGCCKEGDLDTAFE 332



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 141/299 (47%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+A+E +  +  + +     
Sbjct: 45  KGSASAVFAAIIETKGNQRS--DIYVFSGLITAYLESGFLRDAVECYR-LTREHKFWVPF 101

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            T   +++   +    +      E +   G   +++ +  LM+ FCKEG ++ A+ VFD 
Sbjct: 102 DTCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDA 161

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +  + L+P  + Y TL+N + R G ++E  +L   M   G + D+ T+++++ GLC+E K
Sbjct: 162 ITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESK 221

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +++A  + E++   G+  N  ++  +++  C+ G ++ A+E+ + ML +  LP   T N 
Sbjct: 222 MDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNT 281

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+  LCK G    A                                    +L+DE+ +K
Sbjct: 282 LIYGLCKKGALNQA-----------------------------------HDLMDEMSMK 305



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 39/221 (17%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  T+ T++D   +  + +    V +QM                       L + 
Sbjct: 235 KGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQM-----------------------LSQS 271

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           +L             P L   +T +  L +   ++ A + +   +    LKP+   +  L
Sbjct: 272 LL-------------PDLITYNTLIYGLCKKGALNQAHDLMDEMSMK-GLKPDKITYTTL 317

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G L++AFE  K M +  +   + + Y+ LI GLC+ GR  +A ++  EM+S  
Sbjct: 318 IDGCCKEGDLDTAFEHRKRMIQENIRLDD-VAYTALISGLCQEGRSVDAEKMMREMLSFG 376

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
            + PD  TY ++I+ FC+ G V +  K+++ M+ +G  P+V
Sbjct: 377 -LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSV 416


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/518 (23%), Positives = 239/518 (46%), Gaps = 53/518 (10%)

Query: 30  LEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQK 89
           L+V+  ++   D  + T   C    K   F +          EK  Q    I + +   K
Sbjct: 20  LQVVSLSSLTPDSLITTVLNCRSPWKALEFFNAAP-------EKNIQLYSAIIHVLVGSK 72

Query: 90  GFNHNNATYATILDKLAR-YKKFEAVDAVLRQMT-YETCKFHEGIFLNLMKHFSNCSLHE 147
             +H       ++  L + +K + A      +++  ++ KF   ++  L+       L E
Sbjct: 73  LLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVE 132

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIF 205
             L M+HK+        +++A +  L +L+++ + +L     +   SN    L P+   F
Sbjct: 133 EALSMYHKVGAAL----TIQACNVLLYVLVKTGRFELLWRIYEEMISNG---LSPSVITF 185

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMS------------------------------- 234
             LI   C++G L  A E+  EM+   +                                
Sbjct: 186 GTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMRE 245

Query: 235 ---YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
              YPN+ TY+TL+DG CK    ++A+ L+++M+  + ++PD +T+ +LIDG C+ G++ 
Sbjct: 246 VGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLG-EGLVPDVVTFGILIDGLCKFGEMK 304

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A+ +   M      PN+  Y +L++ +CK G + EA  +F E++ F + PD   Y+ LI
Sbjct: 305 AARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILI 364

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
              C   R +EA  + ++M + G  A+ VT+N ++ G C+EGK+++AL +  ++  +G+ 
Sbjct: 365 RGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVE 424

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  ++  +++  C+   L+ A+ +   M+ +   P   T   ++   CK G  ++A   
Sbjct: 425 PNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKL 484

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
              +++ G  P   + + L++ +C+  K+  A EL  E
Sbjct: 485 YSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 157/278 (56%), Gaps = 20/278 (7%)

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           +L  N +K+S     + PN  ++N LI  +CK G +  A  +  E+++ ++S P++ TYS
Sbjct: 308 NLFVNMIKFS-----VTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVS-PDVFTYS 361

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            LI GLC   R  EA  +FE+M +K+ IL +++TYN LIDG C+ GK+D+A +I   M  
Sbjct: 362 ILIRGLCSVSRTEEAGNIFEKM-TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTE 420

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           NG  PNV  ++TL++G+CK   LQ A  ++ EM    L PD + YT +I+  C+ G + E
Sbjct: 421 NGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKE 480

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML-EKLWYDG------------ 409
           AL+L  +M + G   +  T + +L GLC++GKI +AL +  EK+ +              
Sbjct: 481 ALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKP 540

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
              N  +Y  +++  CQ G+  KA++L   M   G  P
Sbjct: 541 SLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQP 578



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 216/476 (45%), Gaps = 64/476 (13%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           + P  ALE FN   E+     N   Y+ I+  L   K       +L  +     K H   
Sbjct: 41  RSPWKALEFFNAAPEK-----NIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSH--- 92

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK-Y 191
                K +  C L             ++R K S    +    L+I   +++L +  L  Y
Sbjct: 93  -----KPYHACQL---------AFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMY 138

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                 L    C  N+L+    K G  E  + + +EM  + +S P++IT+ TLIDG C+ 
Sbjct: 139 HKVGAALTIQAC--NVLLYVLVKTGRFELLWRIYEEMISNGLS-PSVITFGTLIDGCCRQ 195

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G    A E+F+EM  K  I+P  + Y +LI G C   K++ A+ +   M+  G  PNV+ 
Sbjct: 196 GDLLRAQEMFDEMRVKG-IVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYT 254

Query: 312 YTTLMNGFCKE-----------------------------------GKLQEAKEVFDEMK 336
           Y TLM+G+CK                                    G+++ A+ +F  M 
Sbjct: 255 YNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMI 314

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
            F + P+   Y +LI+ +C+ G V EA+ L  E++      D+ T++I++ GLC   + E
Sbjct: 315 KFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTE 374

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  + EK+  +GI  N  +Y  +++  C++G+++KA+E+   M   G  P+  T + L+
Sbjct: 375 EAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLI 434

Query: 457 VRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              CK    + AA+ ++  +V     P+  ++  +++  C+   +  A +L  +++
Sbjct: 435 DGYCKIRNLQ-AAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDML 489



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 142/274 (51%), Gaps = 23/274 (8%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   + P+   ++ILI+  C     E A  + ++M K  +   N +TY++LIDG CK G+
Sbjct: 349 ERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI-LANSVTYNSLIDGCCKEGK 407

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+E+  +M +++ + P+ +T++ LIDG+C+   +  A  I   M     +P+V  YT
Sbjct: 408 MDKALEICSQM-TENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYT 466

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK---EM 370
            +++G CK G ++EA +++ +M +  + P+    + L++  C+ G++ +ALEL     E 
Sbjct: 467 AMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEF 526

Query: 371 KERGCKADI----------VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           +   C  D           V +  ++ GLC++G+  +A+ +   +   G+  ++  Y ++
Sbjct: 527 QTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVM 586

Query: 421 LNFSCQKGELEKAIELLRL---MLCRGFLPHYAT 451
           L     +G  +    L+ L   ML  G +P+ A 
Sbjct: 587 L-----RGLFQVKYILMMLHADMLKFGVIPNSAV 615


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 216/430 (50%), Gaps = 13/430 (3%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +   +  +L  L A  +  +A+D VLR+MT   C  +   +  L+K   + +  
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----PN 201
           +  LE+   +     +  P + + +T +N   +   +D A     Y   H  L     PN
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-----YGTYHEMLDRGILPN 233

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              ++ +I   CK   ++ A EVL  M K+ +  PN  TY++++ G C +G+ +EAI   
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV-MPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M S D + PD +TYN L+D  C+ G+   A+K+ + M   G  P +  Y TL+ G+  
Sbjct: 293 KKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G L E   + D M    + P+   ++ LI  + + G+VD+A+ +  +M+++G   D VT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +  ++G LC+ G++E+A+   E++  + +      Y  +++  C   + +KA EL+  ML
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG        N ++   CK G   ++      +V +G KP+  +++ L++  C   K+ 
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 502 FAFELLDELV 511
            A +LL  +V
Sbjct: 532 EATKLLASMV 541



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 199/406 (49%), Gaps = 10/406 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY +++D L +  +      +   MT    K     +  L++ ++       +
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT---KGAL 355

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
           +EM   +  + R    P+    S  +    +  +VD  Q  L +S    + L P+T  + 
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD--QAMLVFSKMRQQGLNPDTVTYG 413

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G +E A    ++M   ++S P  I Y++LI  LC   ++ +A EL  EM+ 
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I  D + +N +ID  C+ G+V  ++K+ + M   G  P++  Y+TL++G+C  GK+ 
Sbjct: 473 RG-ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++   M +  +KPD + Y TLIN +C+  R+++AL L +EM+  G   DI+T+NIIL
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL +  +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + + +      
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
               T N ++  L K G  ++A      L   G  P+  +++L+ E
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN C + ILI   C  G L+  F  L  + K      + I ++ L+ GLC + R  +A
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 145

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTTL 315
           +++    +++   +P+  +YN+L+ G C   +   A ++++ M ++G  C P+V +YTT+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGF KEG L +A   + EM +  + P+ + Y+++I   C+A  +D+A+E+L  M + G 
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  T+N I+ G C  G+ +EA+G L+K+  DG+  +  +Y  ++++ C+ G   +A +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWALLV 491
           +   M  RG  P   T   LL      G    A + + GL+++    G  P    +++L+
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPNHYVFSILI 381



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 194/388 (50%), Gaps = 9/388 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F++++ ++G      TY T+L   A       +  +L  M       +  +F  L+
Sbjct: 323 ARKMFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL- 196
             ++     ++ + +F K+       P      T + +L +S +V+ A   ++Y  Q + 
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQ-QGLNPDTVTYGTVIGILCKSGRVEDA---MRYFEQMID 437

Query: 197 -RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            RL P   ++N LI   C     + A E++ EM    +   + I ++++ID  CK GR  
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVI 496

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+ +LF+ MV +  + PD +TY+ LIDG+C  GK+D A K++  M + G  P+   Y TL
Sbjct: 497 ESEKLFDLMV-RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+CK  ++++A  +F EM++  + PD I Y  ++    +  R   A EL   + E G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G  ++A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAG 463
           L   +   G +P   T + +   L + G
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 5/260 (1%)

Query: 257 AIELFEEMV--SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           A+  +  M     D++ P+  TY +LI   C  G++D     +  +   G   +   +T 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 315 LMNGFCKEGKLQEAKE-VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           L+ G C + +  +A + V   M      P+   Y  L+   C   R  EALELL+ M + 
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 374 G--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           G  C  D+V++  ++ G  +EG +++A G   ++   GI  N  +Y  ++   C+   ++
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           KA+E+L  M+  G +P+  T N ++   C +G  ++A   L  +   G +P+  ++  L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 492 ELICRGRKLLFAFELLDELV 511
           + +C+  +   A ++ D + 
Sbjct: 312 DYLCKNGRCTEARKMFDSMT 331



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG-IFLNL 136
           A+ +F+ +  Q+G N +  TY T++  L +  + E       QM  E  +   G I  N 
Sbjct: 393 AMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--RLSPGNIVYNS 449

Query: 137 MKHFSNC------SLHERVLEMFHKIHPITREKPSLKAI--STCL-NLLIESNQV-DLAQ 186
           + H S C         E +LEM  +   I  +     +I  S C    +IES ++ DL  
Sbjct: 450 LIH-SLCIFDKWDKAKELILEMLDR--GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
                    + +KP+   ++ LI  +C  G ++ A ++L  M    M  P+ +TY+TLI+
Sbjct: 507 --------RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK-PDCVTYNTLIN 557

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G CK  R  +A+ LF EM S   + PD +TYN+++ G  +  +   AK++   +  +G  
Sbjct: 558 GYCKISRMEDALVLFREMESSG-VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
             +  Y  +++G CK     EA  +F  +    L+ +T  +  +I    + GR DEA +L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              +   G   D+ T++++   L  +G +EE   +   +  +G   N      ++    Q
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736

Query: 427 KGELEKA 433
           +G++ +A
Sbjct: 737 RGDITRA 743


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 154 LRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQ-PDVYTYSVLINGLCKESKMDDA 212

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 213 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 271

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLIN  C+ G +D A E  K M +   + 
Sbjct: 272 GLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRL 331

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ G C+EG+  +A  ML ++   G+  +  +Y +++N  C+ G++    +LL
Sbjct: 332 DEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLL 391

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 392 KEMQRDGHVPSVVTYNVLM 410



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRXGDLDE 176

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
              +   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 177 GFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 236

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 237 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKP 296

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  ++N  C++G+L+ A E  + M+             L+   C+ G + DA   L
Sbjct: 297 DKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKML 356

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 357 REMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEM 394



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 147/261 (56%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK       ++P+   +++LI   CK   ++ A
Sbjct: 155 RPSVVSYNTLMNGYIRXG--DLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDA 212

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 213 NELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 270

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL+NG CKEG L  A E    M    ++
Sbjct: 271 YGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIR 330

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C+ G +     +
Sbjct: 331 LDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKL 390

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 391 LKEMQRDGHVPSVVTYNVLMN 411



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 190 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 246

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TLI GLCK G  ++A  L +EM  K  + PD +TY  L
Sbjct: 247 AMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG-LKPDKITYTTL 304

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I+G C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 305 INGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGL 364

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V    +LLKEM+  G    +VT+N+++ G
Sbjct: 365 KPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 141/318 (44%), Gaps = 52/318 (16%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDALTY 277
           +Y T+I  LC +    EA  L + +VS+                      D  +   L  
Sbjct: 2   SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61

Query: 278 NVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NGCNP 307
             L  GF R                  D  +K++E +                   G   
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLK 181

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ 
Sbjct: 182 SXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITY 301

Query: 488 ALLVELICRGRKLLFAFE 505
             L+   C+   L  AFE
Sbjct: 302 TTLINGCCKEGDLDSAFE 319



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 141/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 32  KGSASAVFAAILETKGTQRS--DIYVFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFD 89

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 90  TCRKVLEHLMKLKYFKLVWGF--------YEEILEC----GYPASLYFFNILMHRFCKDG 137

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 138 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYS 197

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 198 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 257

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T N L+  LCK G                                    L  A
Sbjct: 258 SLSPDLITYNTLIYGLCKKG-----------------------------------DLKQA 282

Query: 504 FELLDELVIK 513
             L+DE+ +K
Sbjct: 283 HHLIDEMSVK 292


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 216/446 (48%), Gaps = 43/446 (9%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+L  L   KK+E  + ++ +M    C  +E  F   ++ F    L +R +++  ++
Sbjct: 9   TYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM 68

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS---------NQHLR---------- 197
            P     P +   ST +N   E   VD A + L            N  L+          
Sbjct: 69  -PRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWED 127

Query: 198 ------------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
                         PN   F++LI   C+   ++SA EVL++M+K     P+ + Y+ +I
Sbjct: 128 IGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE-PDTVNYNIII 186

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           + L + GR  +A+ L   MV K    PDAL +N ++ GFCR  +   A +++  M  + C
Sbjct: 187 NSLSERGRVDDALRLLNSMVCK----PDALGFNAVLKGFCRAERWHDASELIAQMFRDDC 242

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
                 +  L++  C+ G +  A +VF++M  +   PD + Y++L+N F   G V+ A++
Sbjct: 243 PLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ 302

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L + M    CK DI ++N +L GLCR  + E+A  ++ ++       N+ ++ I++N  C
Sbjct: 303 LFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLC 359

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           QKG +++AIE+L  M   G  P   T N L+    + G  +D   AL  L  M  KP++ 
Sbjct: 360 QKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDD---ALKLLSTMSCKPDAI 416

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
           S+   ++ +CR  +   A EL+ E++
Sbjct: 417 SYNSTLKGLCRAERWQDAEELVAEML 442



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 165/318 (51%), Gaps = 11/318 (3%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R  PN   F   I+  C+ G L+ A ++L +M +   + P+++ YSTLI+G  + G   +
Sbjct: 37  RCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCT-PDVVIYSTLINGFSEQGHVDQ 95

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A++L   M+ K    P+ + YN  + G C   + +   ++M  M   GC+PN   ++ L+
Sbjct: 96  ALDLLNTMLCK----PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLI 151

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +  C+   +  A EV ++M+ +  +PDT+ Y  +IN     GRVD+AL LL  M    CK
Sbjct: 152 SSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CK 208

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D + FN +L G CR  +  +A  ++ +++ D   L + ++ I+++  CQ G +  A ++
Sbjct: 209 PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQV 268

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M      P   T + LL    + G+ E  AI LF    M  KP+  S+  +++ +CR
Sbjct: 269 FEQMPRYRCTPDIVTYSSLLNGFSEQGLVE-VAIQLFR--SMPCKPDIFSYNAVLKGLCR 325

Query: 497 GRKLLFAFELLDELVIKE 514
             +   A EL+ E+V K+
Sbjct: 326 AARWEDAGELIAEMVGKD 343



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 186/383 (48%), Gaps = 20/383 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ NT+  +     N   Y   L  L   +++E +  ++ +M  + C  +E  F  L+
Sbjct: 96  ALDLLNTMLCKP----NTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLI 151

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 +L +  +E+  ++     E P     +  +N L E  +VD A   L      + 
Sbjct: 152 SSLCQNNLVDSAVEVLEQMEKYGCE-PDTVNYNIIINSLSERGRVDDALRLLN----SMV 206

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+   FN ++K  C+      A E++ +M +       + T++ LID LC+NG    A
Sbjct: 207 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEM-TFNILIDMLCQNGLVNYA 265

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++FE+M  + +  PD +TY+ L++GF   G V+ A ++   M    C P++F+Y  ++ 
Sbjct: 266 TQVFEQM-PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLK 321

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+  + ++A E+  EM      P+ + +  LIN  C+ G VD A+E+L++M   G   
Sbjct: 322 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 381

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI T+N ++ G   +G++++AL +L  +       +  SY   L   C+    + A EL+
Sbjct: 382 DIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELV 438

Query: 438 RLMLCRGFLPHYAT---SNELLV 457
             ML     P+  T   +N LL+
Sbjct: 439 AEMLRNKCTPNEVTFKYANHLLM 461



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 159/282 (56%), Gaps = 21/282 (7%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+  TY+T++ GLC   ++ EA EL  EM+ +++  P+ +T+   I  FC+ G +DRA +
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMI-RNRCPPNEVTFATQIRSFCQNGLLDRAVQ 63

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M   GC P+V  Y+TL+NGF ++G + +A ++ + M   L KP+T+ Y   +   C
Sbjct: 64  LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGLC 120

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
            A R ++  EL+ EM  +GC  +  TF++++  LC+   ++ A+ +LE++   G   +  
Sbjct: 121 IAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTV 180

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA--IALF 473
           +Y I++N   ++G ++ A+ LL  M+C+   P     N +L   C+A    DA+  IA  
Sbjct: 181 NYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQM 237

Query: 474 -----GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                 L+EM F        +L++++C+   + +A ++ +++
Sbjct: 238 FRDDCPLIEMTFN-------ILIDMLCQNGLVNYATQVFEQM 272



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 6/251 (2%)

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + PD  TYN ++ G C   K + A+++M  M  N C PN   + T +  FC+ G L  A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++ D+M  +   PD + Y+TLIN F   G VD+AL+LL  M    CK + V +N  L GL
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGL 119

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C   + E+   ++ ++   G   N+A++ ++++  CQ   ++ A+E+L  M   G  P  
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
              N ++  L + G  +D   AL  L  M  KP++  +  +++  CR  +   A EL+ +
Sbjct: 180 VNYNIIINSLSERGRVDD---ALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQ 236

Query: 510 LVIKESGTIQV 520
           +   +   I++
Sbjct: 237 MFRDDCPLIEM 247


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 199/394 (50%), Gaps = 41/394 (10%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ---------------------H 195
           HP  R +PS  +++  L  L+ + +VDLA+   + + +                      
Sbjct: 149 HP--RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206

Query: 196 LR-------------LKPNTCIFNILIKHHCKRGTLESAFEV---LKEMKKSQMSYPNLI 239
           LR             L P+   +N LI  +CK+G   + + V   LKEM ++ +S P  +
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGIS-PTAV 265

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T+  LI+G CKN     A+ +FEEM  +  I    +TYN LI G C  GKV+   K+ME 
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEE 324

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M++ G +PN   +  ++ GFCK+G + +A +  D M    ++PD + Y  LI+ + R G+
Sbjct: 325 MEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGK 384

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A+ + + M ++G   ++ T+N ++ G  R G    A G+L+++   GI  +  +Y +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C KGE+ KA++LL  M   G  P++ T N ++   C  G  + A      + +  
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +    ++ + ++  C+  K+  A +LL+E++ K
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 13/345 (3%)

Query: 90  GFNHNNATYATILD---KLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNC 143
           G   + ATY +++D   K         VD +L++M            G+ +N     SN 
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +   RV E   K   I     S+   ++ ++ L    +V+     ++   + L L PN  
Sbjct: 281 AAAVRVFEEM-KQQGIA---ASVVTYNSLISGLCSEGKVEEGVKLME-EMEDLGLSPNEI 335

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            F  ++K  CK+G +  A + +  M +  +  P+++ Y+ LID   + G+  +A+ + E 
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVE-PDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M +K  I P+  TYN LI GF R G    A  +++ MK  G   +V  Y  L+   C +G
Sbjct: 395 M-AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++++A ++ DEM    L+P+ + Y T+I  FC  G +  A E+   M++   +A++VT+N
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           + +   C+ GK++EA  +L ++    +  N  +Y  +     +KG
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 2/203 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+  I+NILI  + + G +E A  V + M K  +S PN+ TY+ LI G  ++G +R A
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS-PNVTTYNCLITGFSRSGDWRSA 423

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM  K  I  D +TYNVLI   C  G+V +A K+++ M   G  PN   Y T++ 
Sbjct: 424 SGLLDEMKEKG-IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC +G ++ A E+   M+    + + + Y   I  FC+ G++DEA +LL EM ++    
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 378 DIVTFNIILGGLCREGKIEEALG 400
           + +T+  I  G+  +G   +  G
Sbjct: 543 NGITYETIKEGMMEKGYTPDIRG 565


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 26/439 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATY--ATILDKLARYKKFEAVDAVLRQM-------------- 121
           AL+    V +Q G   N+ T+        L R + +    ++L+ +              
Sbjct: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFGVL 94

Query: 122 --TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
             TY  C  +  +F  L++ +    +    +  F  +  I   KPS+   +  +  ++++
Sbjct: 95  MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSM-LIRGFKPSVYTCNMIMASMVKN 153

Query: 180 NQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
            +  L   F K   Q L  R+ PN   FNILI   C +G L+ A  +L  M+++    P 
Sbjct: 154 CRAHLVWXFFK---QMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGY-VPT 209

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           +++Y+TL+   CK GRF+ A+ L   M  K  I  D  TYN+ ID  CR  +  +   ++
Sbjct: 210 IVSYNTLLSWCCKKGRFKFALVLIHHMECKG-IQADVCTYNMFIDSLCRNSRSAQGYLVL 268

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M+N    PN  +Y TL+NGF KEGK+  A  VF+EM    L P+ I Y  LIN +C  
Sbjct: 269 KKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCIN 328

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G  +EAL LL  M+    + + VT   +L GL +  K + A  +LE+   +   LN  S+
Sbjct: 329 GNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISH 388

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            ++++  C+ G L++A +LL  M   G  P   T + L+   CK G    A   +  +  
Sbjct: 389 TVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYR 448

Query: 478 MGFKPESDSWALLVELICR 496
            GF P +  ++ L+   C+
Sbjct: 449 EGFVPNNVIFSTLIYNSCK 467



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 163/314 (51%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++ + C +N+ I   C+       + VLK+M+ ++M  PN ++Y+TLI+G  K G+   A
Sbjct: 241 IQADVCTYNMFIDSLCRNSRSAQGYLVLKKMR-NKMITPNEVSYNTLINGFVKEGKIGVA 299

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +F EM+  + + P+ +TYN+LI+G+C  G  + A ++++ M+ N   PN     TL+N
Sbjct: 300 TRVFNEMIELN-LSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLN 358

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  K  K   A+ + +         + I +T +I+  CR G +DEA +LL EM + G   
Sbjct: 359 GLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYP 418

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI+TF++++ G C+ G + +A  ++ K++ +G   N   +  ++  SC+ G + + ++  
Sbjct: 419 DIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFY 478

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G      T N L+  LC+ G   +A   L  +  +G  P S ++  ++      
Sbjct: 479 AAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANV 538

Query: 498 RKLLFAFELLDELV 511
                AF + D+++
Sbjct: 539 GDGSGAFSVFDKMI 552



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 220/457 (48%), Gaps = 17/457 (3%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           S    IS++  + + + A+ I  T+ E+ G+     +Y T+L    +  +F+    ++  
Sbjct: 177 SFNILISVLCVQGKLKKAVNIL-TMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235

Query: 121 M-----TYETCKFHEGIFLNLMKHFSNCSLHERVLE-MFHKIHPITREKPSLKAISTCLN 174
           M       + C ++  +F++ +   S  +    VL+ M +K+  IT   P+  + +T +N
Sbjct: 236 MECKGIQADVCTYN--MFIDSLCRNSRSAQGYLVLKKMRNKM--IT---PNEVSYNTLIN 288

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
             ++  ++ +A        + L L PN   +NILI  +C  G  E A  +L  M+ + + 
Sbjct: 289 GFVKEGKIGVATRVFNEMIE-LNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVR 347

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN +T  TL++GL K+ +F  A  + E   S ++   + +++ V+IDG CR G +D A 
Sbjct: 348 -PNEVTIGTLLNGLYKSAKFDVARNILERY-SINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +++  M  +G  P++  ++ L+NGFCK G L +AKEV  ++      P+ + ++TLI   
Sbjct: 406 QLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G V E ++    M   G  AD  T N ++  LC  GK+ EA   L  +   G+  N 
Sbjct: 466 CKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            ++  ++N     G+   A  +   M+  G  P   T   LL  LCK     +A   L  
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           L  +    ++ S+  L+  I +   LL A  L +E++
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMI 622



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 160/348 (45%), Gaps = 38/348 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  L+K  CK      A ++LK++    ++  + I+Y+TLI  + K+G   EA+ 
Sbjct: 558 PSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAV-DTISYNTLIVEISKSGNLLEAVR 616

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNG 318
           LFEEM+ ++ ILPD+ TY  ++ G  R G++  A   +   M+      N   YT  ++G
Sbjct: 617 LFEEMI-QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
             K G+ + A  +F EM+   L  D I   ++ + + R G+V  A  L+ + + +    +
Sbjct: 676 LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 379 IVTFNIILGG-----------------------------------LCREGKIEEALGMLE 403
           + TFNI+L G                                   LC  G +E  + ML+
Sbjct: 736 LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
               +   ++  ++ +++   C+  +L+K I+L   M          T   +   L +  
Sbjct: 796 MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           ++++  + +  +++ GF P S  +  +++ +CR   +  AF+L D++V
Sbjct: 856 VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMV 903



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 150/350 (42%), Gaps = 20/350 (5%)

Query: 184 LAQNFLKYSNQHLRLKPN--TCIFNILIKHHCKRGTLES-AFEVLKEMKKSQM------- 233
           LA  FLK+  +   L+PN  T I  I   H   R  L   A  +LK + +          
Sbjct: 34  LALKFLKWVIKQPGLEPNHLTHILGI-TTHVLVRARLYGYAKSILKHLAQKNSGSNFLFG 92

Query: 234 ----SYP----NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
               +YP    N   +  LI    + G    A+  F  M+ +    P   T N+++    
Sbjct: 93  VLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG-FKPSVYTCNMIMASMV 151

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           +  +        + M  +   PNV ++  L++  C +GKL++A  +   M+     P  +
Sbjct: 152 KNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIV 211

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y TL++  C+ GR   AL L+  M+ +G +AD+ T+N+ +  LCR  +  +   +L+K+
Sbjct: 212 SYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKM 271

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
               I  N+ SY  ++N   ++G++  A  +   M+     P+  T N L+   C  G  
Sbjct: 272 RNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNF 331

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           E+A   L  +     +P   +   L+  + +  K   A  +L+   I  +
Sbjct: 332 EEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRT 381



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 131/316 (41%), Gaps = 37/316 (11%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            PN   FNIL+  + +   + S F++   M++S   +PN +TY +LI GLC +G     I+
Sbjct: 734  PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGF-FPNRLTYHSLILGLCNHGMLELGIK 792

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI----------------------- 296
            + +  +++   + D LT+N+LI   C    +D+   +                       
Sbjct: 793  MLKMFIAESSTIDD-LTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVL 851

Query: 297  ------------MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
                        M  M   G  P    Y T+M   C+ G +Q A ++ D+M    +  D 
Sbjct: 852  VRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDD 911

Query: 345  IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
                 ++      G+++EA+ +L+ M          TF  ++   C++   +EA  +   
Sbjct: 912  AAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKIL 971

Query: 405  LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            + +  + L+  +Y ++++  C  G++  A++    +  +G LP+  T   L+  +     
Sbjct: 972  MEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHY 1031

Query: 465  AEDAAIALFGLVEMGF 480
                 I L  L + G 
Sbjct: 1032 VSRGEIVLKDLNDRGL 1047



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 173/417 (41%), Gaps = 47/417 (11%)

Query: 72   EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
            E    CA      + +++    N+  Y   +D L +  + +A   + ++M        +G
Sbjct: 643  EGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEME------EKG 696

Query: 132  IFLNLMKHFSNCSLHERVLEMFHKIHPI--TREKPSLKAISTCLNLLIE--SNQVDLAQN 187
            + L+L+   S    + R+ ++F     I  TR K  +  ++T  N+L+   S   D+   
Sbjct: 697  LSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTT-FNILLHGYSRGQDIMSC 755

Query: 188  FLKYS-NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            F  Y+  +     PN   ++ LI   C  G LE   ++LK M  ++ S  + +T++ LI 
Sbjct: 756  FKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK-MFIAESSTIDDLTFNMLIR 814

Query: 247  GLCKNGRFREAIELFEEM----VSKDQ------------------------------ILP 272
              C+     + I+L   M    VS D+                               +P
Sbjct: 815  KCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIP 874

Query: 273  DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
             +  Y  ++   CR G +  A K+ + M   G + +      ++ G    GK++EA  + 
Sbjct: 875  TSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWIL 934

Query: 333  DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
              M      P T  +TTL++ FC+     EA  L   M+    K DIV +N+++   C  
Sbjct: 935  QRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCAN 994

Query: 393  GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            G +  AL   E++   G+  N  +YR++++    K  + +   +L+ +  RG +  Y
Sbjct: 995  GDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGY 1051


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +   A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDGA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD   YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 411 KEMHRDGHAPSVVTYNVLM 429



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+  A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 152/261 (58%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 NELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+ F YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMHRDGHAPSVVTYNVLMN 430



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDGANELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GLCK G  ++A +L +EM S   + PD  TY  L
Sbjct: 266 AMEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMKGLKPDKFTYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPDT  YT +IN FC+ G V +  +LLKEM   G    +VT+N+++ G
Sbjct: 384 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVS-----------------KDQILPDALTYNV 279
            L +Y T+I  LC +    EA  L E +VS                 K     D   ++ 
Sbjct: 18  TLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSG 77

Query: 280 LIDGFCRGG-------------------KVDRAKKIME-FMKNN---------------G 304
           LI  +   G                     D  +K++E  MK                 G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K++ A  + +++   G+  N  ++  +++  
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +  LP   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFE 338



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAVLETKGNQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD 108

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGF--------YEEILE----CGYPASLYFFNILMHRFCKDG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 157 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K++ A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 217 VLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G                                    L  A
Sbjct: 277 SLLPDLITYNTLIYGLCKKG-----------------------------------DLKQA 301

Query: 504 FELLDELVIK 513
            +L+DE+ +K
Sbjct: 302 HDLIDEMSMK 311


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 210/410 (51%), Gaps = 40/410 (9%)

Query: 145 LHERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
           L+ +V E  H    +  +   L  +S  T +N L ++ +   A   L+  +  L ++PN 
Sbjct: 146 LNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDG-LLVQPNV 204

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
            ++N +I   CK   +  A ++  EM   ++ +P+++TY+TLI G    GR +EA+ LF 
Sbjct: 205 VMYNTIIDSLCKDKLVIHASDLCSEMIVKRI-FPDVVTYTTLIYGCLIVGRLKEAVGLFN 263

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM------ 316
           +M+ K+ I PD  T+N+L+DG C+ G++ +A+ ++  M   G + N+  Y +LM      
Sbjct: 264 QMLLKN-IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLV 322

Query: 317 -----------------------------NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
                                        NG CK   + EA  +F EM +  + P+T+ Y
Sbjct: 323 KQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTY 382

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            +LI+   + GR+ +A +L+ EM  RG  AD++T++ +L  LC+  ++++A+ ++ K+  
Sbjct: 383 NSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKD 442

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            GI  N  +Y I+++  C+ G L+ A  + + +L +G+       N ++  LCK G+ ++
Sbjct: 443 QGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDE 502

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
           A   +  + + G  P++ ++  LV  +    K   A +LL E++++ S  
Sbjct: 503 ALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAV 552



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 188/363 (51%), Gaps = 10/363 (2%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            +L M + + PI          +  L+ L++ N    A +F K   +  +++P+   FNI
Sbjct: 53  HILHMRNPVQPIFE-------FNKILSSLVKLNHFHTAISFSK-QMELKQIQPDLFTFNI 104

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   C  G L  AF VL ++ K    +P+ +T +TLI GLC NG+ REA+   +++++K
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGF-HPDTVTITTLIKGLCLNGKVREALHFHDDVIAK 163

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
              L D ++Y  LI+G C+ G+   A +++  +      PNV  Y T+++  CK+  +  
Sbjct: 164 GFHL-DQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIH 222

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++  EM    + PD + YTTLI      GR+ EA+ L  +M  +  K D+ TFNI++ 
Sbjct: 223 ASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVD 282

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+EG++++A  +L  +   G+  N  +Y  +++      +  KA  +   M  RG  P
Sbjct: 283 GLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTP 342

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              + + ++  LCK  M ++A      +      P + ++  L++ + +  ++  A++L+
Sbjct: 343 DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLV 402

Query: 508 DEL 510
           +E+
Sbjct: 403 NEM 405



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 4/243 (1%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+  F  ++     +     +N ++    +      A    + M+     P++F +  L
Sbjct: 46  DAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNIL 105

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N FC  G L  A  V  ++      PDT+  TTLI   C  G+V EAL    ++  +G 
Sbjct: 106 INCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF 165

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL--NKASYRIVLNFSCQKGELEKA 433
             D V++  ++ GLC+ G+   AL +L K+  DG+ +  N   Y  +++  C+   +  A
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKI--DGLLVQPNVVMYNTIIDSLCKDKLVIHA 223

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            +L   M+ +   P   T   L+      G  ++A      ++    KP+  ++ +LV+ 
Sbjct: 224 SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283

Query: 494 ICR 496
           +C+
Sbjct: 284 LCK 286



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/198 (18%), Positives = 89/198 (44%), Gaps = 9/198 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
             K    N  TY +++D L +Y +      ++ +M           + +L+         
Sbjct: 371 HSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQV 430

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF---LKYSNQHLRLKPNTC 203
           ++ + +  KI      +P++   +  ++ L ++ ++  AQ     L     HL +K    
Sbjct: 431 DKAITLITKIKD-QGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVK---- 485

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           ++N+++   CK G  + A  ++ +M+ +    P+ +TY TL+  L +N +  +A++L  E
Sbjct: 486 MYNVMVNGLCKEGLFDEALSLVSKMEDNG-CIPDAVTYETLVRALFENDKNDKAVKLLRE 544

Query: 264 MVSKDQILPDALTYNVLI 281
           M+ +   +   ++ N ++
Sbjct: 545 MIVQGSAVGSNISSNSML 562


>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 903

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 217/466 (46%), Gaps = 52/466 (11%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA------------------ 116
           P+  +EIFN  S+Q+ F  +   Y  ++  L+R + +    +                  
Sbjct: 84  PEACVEIFNLASKQQKFRPDYKAYCKMVHILSRARNYGQTKSYLCELVALNHSGFVVWGE 143

Query: 117 ---VLRQMTYETCKF--------HEGIFLNLMKHFSNCSLHERVL--------------- 150
              V ++ ++    F         +G+  N +  F N   + R+                
Sbjct: 144 LVRVFKEFSFSPTVFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKK 203

Query: 151 -EMFHKIHPITRE-----KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            E F  +H   +       P +   S  +N      +VD A  F K  +  L L+ N   
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVT 263

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
            N LI  +   G +E    VL+ M +  +S  N++T+++LI   CK G   EA ++FE +
Sbjct: 264 CNSLINGYAMIGDVEGMTRVLRLMSERGVS-RNVVTFTSLIKSYCKKGLMEEAEQVFE-L 321

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V++ +++PD   + VLIDG+CR G++  A ++ ++M   G   N     +L+NG+CK G+
Sbjct: 322 VTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQ 381

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA+++   M ++ LKPD   Y TL++ +CRAG VDEAL+L   M ++     ++T+NI
Sbjct: 382 LVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNI 441

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L G  R G   + L + + +   G+  N+ S   +L    + G+ ++A++L   +L RG
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARG 501

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
            L    T N ++  LCK     +A   L  +     KP+  ++  L
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQAL 547



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 189/413 (45%), Gaps = 12/413 (2%)

Query: 70  KCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           K +K    A E+ N++    G   N  T  ++++  A     E +  VLR M+      +
Sbjct: 240 KVDKAMAFAKEMDNSL----GLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSERGVSRN 295

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQN 187
              F +L+K +    L E   ++F     +T +K  P        ++    + ++  A  
Sbjct: 296 VVTFTSLIKSYCKKGLMEEAEQVFE---LVTEKKLVPDQHMHGVLIDGYCRNGRICDAVR 352

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
              Y  + + ++ NT I N LI  +CK G L  A ++L  M    +  P+  TY+TL+DG
Sbjct: 353 VHDYMIE-MGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLK-PDHHTYNTLVDG 410

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
            C+ G   EA++L   M  K +++P  +TYN+L+ G+ R G       + + M   G   
Sbjct: 411 YCRAGHVDEALKLCGRMCQK-EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTA 469

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N  + +TL+    K G   EA ++++ +    L  DTI    +I+  C+  +V+EA E+L
Sbjct: 470 NEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             +    CK D+ T+  +  G    G ++EA  + + +   GI+     Y  +++ + + 
Sbjct: 530 DNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKY 589

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             L K  +L+  +  RG  P  AT   L+   C  GM + A    F ++E G 
Sbjct: 590 KHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 161/353 (45%), Gaps = 41/353 (11%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +NIL+K + + G       + K M K  ++  N I+ STL++ L K G F EA++
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVT-ANEISCSTLLEALFKLGDFDEAMK 492

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+E ++++  +L D +T NV+I G C+  KV+ AK+I++ +    C P+V  Y  L +G+
Sbjct: 493 LWENVLARG-LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGY 551

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
              G L+EA  V D M+   + P    Y TLI+   +   +++  +L+ E++ RG    +
Sbjct: 552 YNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTV 611

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+  ++ G C  G I++A     ++   GI LN      + N   +  + ++A  LL+ 
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQK 671

Query: 440 -----MLCRGF---------------------------------LPHYATSNELLVRLCK 461
                +L  G+                                 +P+    N  +  LCK
Sbjct: 672 IVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCK 731

Query: 462 AGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           AG   DA      L+    F P+  ++ +L+        +  AF L DE+ +K
Sbjct: 732 AGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALK 784



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 79/139 (56%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN I Y+  I GLCK G+  +A +LF +++S D+ +PD  TY +LI G    G +++A  
Sbjct: 717 PNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFN 776

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M   G  PN+  Y  L+ G CK G +  A+ +  ++      P+ I Y TLI+   
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLI 836

Query: 356 RAGRVDEALELLKEMKERG 374
           ++G V EA+ L ++M E+G
Sbjct: 837 KSGDVAEAMRLKEKMIEKG 855



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 49/278 (17%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    +  LI   C  G ++ A+    EM +  ++  N+   S + + L +  +F EA
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL-NVNICSKIANSLFRLDKFDEA 665

Query: 258 IELFEEMVSKDQILP-------------------------------------DALTYNVL 280
             L +++V  D +LP                                     + + YNV 
Sbjct: 666 CLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVA 725

Query: 281 IDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           I G C+ GK+  A+K+  + + ++   P+ + YT L++G   +G + +A  + DEM    
Sbjct: 726 IAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKG 785

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P+ + Y  LI   C+ G VD A  LL+++ ++G   + +T+N ++ GL + G + EA+
Sbjct: 786 IIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAM 845

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            + EK+   G  L + SY+        +G+++K  E+L
Sbjct: 846 RLKEKMIEKG--LVRGSYK--------QGDVDKPKEVL 873



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 108/490 (22%), Positives = 193/490 (39%), Gaps = 67/490 (13%)

Query: 34  KANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNH 93
           + N     P   T +T VD   R+  +     +    C+KE      +  TV        
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKE------VVPTV-------- 436

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
              TY  +L   +R   F  V ++ + M       +E     L++        +  ++++
Sbjct: 437 --MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLW 494

Query: 154 HKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
             +  + R    L   +  LN++I       +V+ A+  L   N   R KP+   +  L 
Sbjct: 495 ENV--LAR---GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI-FRCKPDVQTYQALS 548

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
             +   G L+ AF V   M+K  + +P +  Y+TLI G  K     +  +L  E+ ++  
Sbjct: 549 HGYYNVGNLKEAFAVKDFMEKKGI-FPTIEMYNTLISGAFKYKHLNKVADLVIELRARG- 606

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           + P   TY  LI G+C  G +D+A      M   G   NV   + + N   +  K  EA 
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEAC 666

Query: 330 EVFDEMKNF--------------------------------------LLKPDTIGYTTLI 351
            +  ++ +F                                      LL P+ I Y   I
Sbjct: 667 LLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAI 726

Query: 352 NCFCRAGRVDEALELLKEM-KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
              C+AG++ +A +L  ++        D  T+ I++ G   +G I +A  + +++   GI
Sbjct: 727 AGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGI 786

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N  +Y  ++   C+ G +++A  LLR +  +G  P+  T N L+  L K+G   +A  
Sbjct: 787 IPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMR 846

Query: 471 ALFGLVEMGF 480
               ++E G 
Sbjct: 847 LKEKMIEKGL 856



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 130/264 (49%), Gaps = 2/264 (0%)

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G  + A+ +F+ M    +I P  L+ N L+    + G+   A  + + M +   +P+VF 
Sbjct: 169 GMVKNALHVFDNMGKYGRI-PSLLSCNSLLSNLVKKGENFVALHVYDQMISFEVSPDVFT 227

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            + ++N +C+ GK+ +A     EM N L L+ + +   +LIN +   G V+    +L+ M
Sbjct: 228 CSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLM 287

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            ERG   ++VTF  ++   C++G +EEA  + E +    +  ++  + ++++  C+ G +
Sbjct: 288 SERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRI 347

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+ +   M+  G   +    N L+   CK+G   +A   L  + +   KP+  ++  L
Sbjct: 348 CDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTL 407

Query: 491 VELICRGRKLLFAFELLDELVIKE 514
           V+  CR   +  A +L   +  KE
Sbjct: 408 VDGYCRAGHVDEALKLCGRMCQKE 431


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 205/418 (49%), Gaps = 24/418 (5%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           KFE   +++R+M  +        +  ++    N S  +    +F ++    +    +  +
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM----KSNHVVPDV 515

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            T   L+    +V L Q   K+ ++ +R    PN   +  LI  + K   + SA E+  E
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-E 574

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL---------------P 272
           M  S+   PN++TY+ LIDG CK+G+  +A +++  M     I                P
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           +  TY  L+DG C+  KV  A+ +++ M   GC PN   Y  L++GFCK GKL EA+ VF
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            +M      P+   Y++LI+   +  R+D AL++L  M E  C  +++ +  ++ GLC+ 
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           GK +EA  ++  +   G + N  +Y  +++   + G+++K +EL+R M  +G  P++ T 
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             L+   C AG+ +DA   L  + +  +      +  ++E     R+ + +  LLDE+
Sbjct: 815 RVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEI 870



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 171/330 (51%), Gaps = 18/330 (5%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  ++ +I   C    +++AF + +EMK + +  P++ TY+ LID  CK G  ++A +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV-VPDVFTYTILIDSFCKVGLLQQARK 536

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F+EMV +D   P+ +TY  LI  + +  K+  A ++ E M + GC PNV  YT L++G 
Sbjct: 537 WFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 320 CKEGKLQEAKEVFDEMKNF----------------LLKPDTIGYTTLINCFCRAGRVDEA 363
           CK G++++A +++  M+                  +  P+   Y  L++  C+A +V EA
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            +LL  M   GC+ + + ++ ++ G C+ GK++EA  +  K+   G   N  +Y  +++ 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             +   L+ A+++L  ML     P+     E++  LCK G  ++A   +  + E G  P 
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++  +++   +  K+    EL+ ++  K
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 211/439 (48%), Gaps = 24/439 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN----- 142
           + G   N  TY  ++    + +K  + + +   M  E C  +   +  L+          
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 143 --CSLHERV--------LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
             C ++ R+        ++M+ KI       P++      ++ L ++++V  A++ L   
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKN 251
           +     +PN  +++ LI   CK G L+ A  V  +M  S+  Y PN+ TYS+LID L K+
Sbjct: 663 SVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM--SERGYGPNVYTYSSLIDRLFKD 719

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R   A+++   M+ ++   P+ + Y  +IDG C+ GK D A ++M  M+  GC+PNV  
Sbjct: 720 KRLDLALKVLSRML-ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT +++GF K GK+ +  E+  +M      P+ + Y  LIN  C AG +D+A +LL EMK
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           +      +  +  ++ G  RE  I  +LG+L+++  +       +YRI+++  C+ G LE
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 432 KAIELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWAL 489
            A+EL + M  C  +          L+         D A  L+  +++ G  PE   +  
Sbjct: 897 LALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFY 956

Query: 490 LVELICRGRKLLFAFELLD 508
           LV+ + R  +   A +L D
Sbjct: 957 LVKGLIRINRWEEALQLSD 975



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 11/324 (3%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + L  KP+   +N L++   +   L++A+ V +EM  S  +     T    +  LCK GR
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY-TLGCFVHLLCKAGR 282

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           +REA+ L E    K++   D + Y  +I G C     + A   +  M+++ C PNV  Y 
Sbjct: 283 WREALALIE----KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G  ++ +L   K +   M      P    + +LI+ +CR+G    A +LLK+M + 
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 374 GCKADIVTFNIILGGLCREGKIE--EALGMLEKLWYD----GIYLNKASYRIVLNFSCQK 427
           GC+   V +NI++GG+C   K+   + L + EK + +     + LNK +   +    C  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G+ EKA  ++R M+ +GF+P  +T ++++  LC A   ++A +    +      P+  ++
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
            +L++  C+   L  A +  DE+V
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMV 542



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 161/369 (43%), Gaps = 59/369 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR--EA 257
           P+  IFN LI  +C+ G    A+++LK+M       P  + Y+ LI G+C N +    + 
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQ-PGYVVYNILIGGICGNEKLPSLDV 425

Query: 258 IELFE----EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           +EL E    EM+    +L      N L    C  GK ++A  I+  M + G  P+   Y+
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++   C   K+  A  +F+EMK+  + PD   YT LI+ FC+ G + +A +   EM   
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  ++VT+  ++    +  K+  A  + E +  +G   N  +Y  +++  C+ G++EKA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 434 IE---------------------------------------------------LLRLMLC 442
            +                                                   LL +M  
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G  P++   + L+   CK G  ++A +    + E G+ P   +++ L++ + + ++L  
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724

Query: 503 AFELLDELV 511
           A ++L  ++
Sbjct: 725 ALKVLSRML 733



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 148/323 (45%), Gaps = 48/323 (14%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           +F  +SE +G+  N  TY++++D+L + K+ +    VL +M   +C  +  I+  ++   
Sbjct: 693 VFTKMSE-RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751

Query: 141 SNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 +      +++  +  EK   P++   +  ++   ++ +VD     ++       
Sbjct: 752 CKVGKTDEA----YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK-G 806

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFRE 256
             PN   + +LI H C  G L+ A ++L EMK  Q  +P ++  Y  +I+G   N  F  
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK--QTYWPKHMAGYRKVIEGF--NREFII 862

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           ++ L +E ++++  +P    Y +LID FC+ G+++ A ++ + M +  C     +Y+   
Sbjct: 863 SLGLLDE-IAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS--CT----SYSA-- 913

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
                                     D   Y++LI     A +VD+A EL  +M +RG  
Sbjct: 914 -------------------------ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948

Query: 377 ADIVTFNIILGGLCREGKIEEAL 399
            ++  F  ++ GL R  + EEAL
Sbjct: 949 PELSIFFYLVKGLIRINRWEEAL 971



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 3/191 (1%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G    A E    +K+   KP  + Y  L+  F  A R+D A  + +EM + G   D 
Sbjct: 208 CRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDG 267

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T    +  LC+ G+  EAL ++EK   +   L+   Y  +++  C+    E+A++ L  
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSR 324

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M     +P+  T   LL    +          L  ++  G  P    +  L+   CR   
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 500 LLFAFELLDEL 510
             +A++LL ++
Sbjct: 385 YSYAYKLLKKM 395


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 164/307 (53%), Gaps = 3/307 (0%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
            ++++  C++G  +   E  + M +   + PN++ Y+  IDGLCK    ++A  + EEMV
Sbjct: 212 TVVVRSLCEKGRFKDVSEFFRRMLEMG-TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV 270

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKI-MEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +  + P+  T+  LIDG C+ G  +RA ++ ++ +K++   PNV  YT ++ G+C+EGK
Sbjct: 271 GRG-LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 329

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L  A+ +   M    LKP+T  YTTLI   C+ G  D A EL+ +MK+ G   +I T+N 
Sbjct: 330 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 389

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C++GKI+EA  +L      G+  +K +Y I++   C++G +  A++L   M+  G
Sbjct: 390 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 449

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P       L+   C+    E++       + +G  P   ++  ++   C+  +   A 
Sbjct: 450 CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMAL 509

Query: 505 ELLDELV 511
            + + +V
Sbjct: 510 RVFERMV 516



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 149/280 (53%), Gaps = 1/280 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +   I   CKR  ++ AF VL+EM    +  PN+ T++TLIDGLCK G    A  
Sbjct: 241 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK-PNVYTHTTLIDGLCKIGWTERAFR 299

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF +++      P+  TY V+I G+CR GK+ RA+ ++  M   G  PN   YTTL+ G 
Sbjct: 300 LFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGH 359

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G    A E+ ++MK     P+   Y  +I+ FC+ G++ EA ++L+    +G K D 
Sbjct: 360 CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDK 419

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+ I++   C++G I  AL + +++  +G   +  +Y  +++  CQ+ ++E++ +    
Sbjct: 420 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 479

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
            L  G LP   T   ++   CK G +  A      +V+ G
Sbjct: 480 CLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNG 519



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 161/314 (51%), Gaps = 3/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F  L+   C+ G +E    +L  M +   S  N  T + ++  LC+ GRF++  E
Sbjct: 171 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDN-ATCTVVVRSLCEKGRFKDVSE 229

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F  M+      P+ + Y   IDG C+   V +A  ++E M   G  PNV+ +TTL++G 
Sbjct: 230 FFRRMLEMGTP-PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288

Query: 320 CKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           CK G  + A  +F ++ K+   KP+   YT +I  +CR G++  A  LL  M E+G K +
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 348

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+  ++GG C+ G  + A  ++ K+  +G   N  +Y  V++  C+KG++++A ++LR
Sbjct: 349 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 408

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           +   +G      T   L+   CK G    A      +VE G  P+ +++  L+   C+ R
Sbjct: 409 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 468

Query: 499 KLLFAFELLDELVI 512
           ++  + +  D+ ++
Sbjct: 469 QMEESQKFFDKCLM 482



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 173/370 (46%), Gaps = 23/370 (6%)

Query: 44  VETSDTCVDARKRSRFISHGAAISLIK---CEKEPQCALEIFNTVSE------QKGFNHN 94
           VE  D  + A  R  F    A  +++    CEK        F  VSE      + G   N
Sbjct: 189 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR------FKDVSEFFRRMLEMGTPPN 242

Query: 95  NATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
              Y   +D L + +  +    VL +M     K +      L+         ER   +F 
Sbjct: 243 VVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFL 302

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
           K+   +  KP++   +  +       ++  A+  L    +   LKPNT  +  LI  HCK
Sbjct: 303 KLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ-GLKPNTNTYTTLIGGHCK 361

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
            G+ + AFE++ +MK+     PN+ TY+ +IDG CK G+ +EA ++   M +   +  D 
Sbjct: 362 GGSFDRAFELMNKMKQEGF-LPNIYTYNAVIDGFCKKGKIQEAYKVLR-MATSQGLKFDK 419

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +TY +LI   C+ G +  A  + + M  NGC P++  YT+L++ +C++ +++E+++ FD+
Sbjct: 420 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 479

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF---NIILGGLCR 391
                L P    YT++I  +C+ GR   AL + + M + GC AD +     N++     R
Sbjct: 480 CLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSILMCSNNVV--SATR 537

Query: 392 EGKIEEALGM 401
              + EA G+
Sbjct: 538 HSPLHEAHGL 547



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 7/326 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF+ +NAT   ++  L    +F+ V    R+M       +    +N             V
Sbjct: 203 GFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPN---VVNYTAWIDGLCKRRYV 259

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            + FH +  +     KP++   +T ++ L +    + A        +    KPN   + +
Sbjct: 260 KQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 319

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I  +C+ G L  A  +L  M +  +  PN  TY+TLI G CK G F  A EL  +M  +
Sbjct: 320 MIGGYCREGKLARAEMLLVRMVEQGLK-PNTNTYTTLIGGHCKGGSFDRAFELMNKM-KQ 377

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           +  LP+  TYN +IDGFC+ GK+  A K++    + G   +   YT L+   CK+G +  
Sbjct: 378 EGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITY 437

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++FD M      PD   YT+LI+ +C+  +++E+ +   +    G      T+  ++ 
Sbjct: 438 ALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIA 497

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLN 413
           G C+ G+   AL + E++  +G + +
Sbjct: 498 GYCKVGRSTMALRVFERMVQNGCFAD 523



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 165/388 (42%), Gaps = 50/388 (12%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           +R  P L+ +   + L + +    +A+  L  +++ +R          ++    + G L 
Sbjct: 73  SRHAPDLRRL---MRLYVTAATAFVARGSLPMAHEVMR---------GMVAAFGEAGRLP 120

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            A +++ EM+   +          L  GL + G F  A ++F+ M ++  + PD  ++  
Sbjct: 121 EAADMVLEMRSHGLPLCVETANWVLRVGL-ETGSFVYARKVFDGM-TRAGVCPDERSFRA 178

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L+   CR GKV+    ++  M   G + +    T ++   C++G+ ++  E F  M    
Sbjct: 179 LVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMG 238

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             P+ + YT  I+  C+   V +A  +L+EM  RG K ++ T   ++ GLC+ G  E A 
Sbjct: 239 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 298

Query: 400 G------------------------------------MLEKLWYDGIYLNKASYRIVLNF 423
                                                +L ++   G+  N  +Y  ++  
Sbjct: 299 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGG 358

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G  ++A EL+  M   GFLP+  T N ++   CK G  ++A   L      G K +
Sbjct: 359 HCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFD 418

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             ++ +L+   C+   + +A +L D +V
Sbjct: 419 KITYTILITEHCKQGHITYALDLFDRMV 446


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 192/351 (54%), Gaps = 7/351 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP-NTCIFNILIKHHCKRGTLES 220
           ++  +   S  +   +ES  V  A    + + +H    P +TC    +++H  K    + 
Sbjct: 62  QRSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTC--RKVLEHLMKLKYFKL 119

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            ++  KE+   +  YP +L  ++ ++   CK G  R A  +F+  ++K  + P  +++N 
Sbjct: 120 VWDFYKEI--LECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDA-ITKWGLRPSVVSFNT 176

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L++G+ R G +D   ++   M  +G  P+V+ Y+ L+NG CKE K+ EA E+F+EM +  
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRG 236

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + +TTLI+  C+ G VD A+E+ K+M  +G   D++T+N ++ GLC++G +++  
Sbjct: 237 LVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVR 296

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +++++  +G+  +K +Y  +++  C++G+LE A E  + M+             L+  L
Sbjct: 297 ALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGL 356

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           C+ G A+DA      ++ +G KP++ ++ +++   C+   +  A  LL E+
Sbjct: 357 CQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEM 407



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 147/250 (58%), Gaps = 2/250 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  EA
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ-PDVYTYSVLINGLCKESKVDEA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF EM+ +  ++P+ +T+  LID  C+ G VD A +I + M + G +P++  Y TL+ 
Sbjct: 226 NELFNEMLDRG-LVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++ + + DEM    LKPD I YTTLI+  C+ G ++ A E  K M +   + 
Sbjct: 285 GLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+ ++A  M  ++   G+  +  +Y +++N  C+KG++  A  LL
Sbjct: 345 DNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLL 404

Query: 438 RLMLCRGFLP 447
           + M   G +P
Sbjct: 405 KEMQRDGHVP 414



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 142/278 (51%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNI++   CK G +  A  V   + K  +  P++++++TL++G  + G   E   L   M
Sbjct: 139 FNIVMHRFCKEGEMRRAQSVFDAITKWGLR-PSVVSFNTLMNGYIRLGDLDEGFRLKSAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  KVD A ++   M + G  PN   +TTL++  CK G 
Sbjct: 198 HASG-VQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGM 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +    PD I Y TLI   C+ G + +   L+ EM   G K D +T+  
Sbjct: 257 VDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G  + A ++ R ML  G
Sbjct: 317 LIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G    A+  L  +   G  P
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 152/304 (50%), Gaps = 10/304 (3%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           + +  + F  +   K +Q S  ++  +S L+    ++G   +AI+ F         +P  
Sbjct: 45  KDSASAVFAAILGTKGTQRS--DIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFD 102

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
               VL        K+   K + +F K     G   +++ +  +M+ FCKEG+++ A+ V
Sbjct: 103 TCRKVLEHLM----KLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSV 158

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD +  + L+P  + + TL+N + R G +DE   L   M   G + D+ T+++++ GLC+
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCK 218

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           E K++EA  +  ++   G+  N  ++  +++  C+ G ++ A+E+ + ML +GF P   T
Sbjct: 219 ESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLIT 278

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+  LCK G  +     +  +   G KP+  ++  L++  C+   L  AFE    + 
Sbjct: 279 YNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRM- 337

Query: 512 IKES 515
           IKES
Sbjct: 338 IKES 341


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 239/480 (49%), Gaps = 11/480 (2%)

Query: 32  VIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGF 91
           ++K   P     + T +   + +K    +     ++ +K E     AL  F +++    F
Sbjct: 10  LLKKQKPLVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSNSF 69

Query: 92  NHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLE 151
            H   TY T++ +L   +  + +  +L+ M  E    +E +F+ ++  +    L E+ L+
Sbjct: 70  KHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALK 129

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN-QHLRLKPNTCIFNILIK 210
            F++I      KPS+K  +  L+ L+  N+  +      Y+N +   ++ N   +N+L+K
Sbjct: 130 TFYRIGEFGC-KPSVKIYNHVLDALLSENKFQMINGI--YNNMKRDGIELNVYTYNMLLK 186

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             CK   +++A ++L EM   +   P+ ++Y+T++  +C+ G+  EA EL   + S    
Sbjct: 187 ALCKNDRVDAARKLLAEMS-YKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKS---F 242

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +P    YN LI+GFCR  K++   ++   M   G +P+V  Y+T++N   + G ++ A  
Sbjct: 243 VP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALA 299

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           V  +M      P+   +T+L+  +   GR+ EAL+L   M + G + + V +N ++ GLC
Sbjct: 300 VLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLC 359

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
             GK+ EA+ + +K+  +G++ N+ +Y  +++   + G+L  A E+   M+  G LP+  
Sbjct: 360 SYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVV 419

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
               ++  LC+  M   A   +  +      P + ++   ++ +C   K  +A ++L+++
Sbjct: 420 VYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQM 479



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 203/440 (46%), Gaps = 47/440 (10%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   +  +Y T++  + R  K E      R+++     F   ++  L+  F      E 
Sbjct: 207 KGCIPDAVSYTTVVSSMCRLGKVEEA----RELSMRIKSFVP-VYNALINGFCREHKMEE 261

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNI 207
           V E+F+++  +    P +   ST +N L E   V++A   L  +   LR   PN   F  
Sbjct: 262 VFELFNEM-AVEGIDPDVITYSTVINTLSEMGNVEMALAVL--AKMFLRGCSPNVHTFTS 318

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+K +   G L  A ++   M + + S PN + Y+TLI GLC  G+  EA+ + ++M  +
Sbjct: 319 LMKGYFMGGRLCEALDLWNRMIQ-EGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKM-ER 376

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + P+  TY+ LIDGF + G +  A +I   M  NGC PNV  YT +++  C+      
Sbjct: 377 NGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNH 436

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC------------ 375
           A  + + M N    P+TI + T I   C +G+ + A+++L +M++ GC            
Sbjct: 437 ALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLD 496

Query: 376 -----------------------KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
                                  K+++VT+N IL G C  G  + AL +  KL   G   
Sbjct: 497 GLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKP 556

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRG-FLPHYATSNELLVRLCKAGMAEDAAIA 471
           +  +Y  V+   C++GE++ AI+L+  +  +G   P   T   LL  +C     ++A + 
Sbjct: 557 DSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVH 616

Query: 472 LFGLVEMGFKPESDSWALLV 491
           L  ++  G  P   +W  LV
Sbjct: 617 LDKMINEGICPNRATWNALV 636



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 206/439 (46%), Gaps = 16/439 (3%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           I+N + ++ G   N  TY  +L  L +  + +A   +L +M+Y+ C      +  ++   
Sbjct: 165 IYNNM-KRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSM 223

Query: 141 SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYSNQHLR- 197
                 E   E+  +I          K+     N LI     +  + + F  ++   +  
Sbjct: 224 CRLGKVEEARELSMRI----------KSFVPVYNALINGFCREHKMEEVFELFNEMAVEG 273

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   ++ +I    + G +E A  VL +M     S PN+ T+++L+ G    GR  EA
Sbjct: 274 IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCS-PNVHTFTSLMKGYFMGGRLCEA 332

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L+  M+ +    P+ + YN LI G C  GK+  A  + + M+ NG  PN   Y+TL++
Sbjct: 333 LDLWNRMIQEGS-EPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLID 391

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF K G L  A E++++M      P+ + YT +++  CR    + AL L++ M    C  
Sbjct: 392 GFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPP 451

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + +TFN  + GLC  GK E A+ +L ++   G   N  +Y  VL+         +A++++
Sbjct: 452 NTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIV 511

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             +       +  T N +L   C AGM + A      L+  G KP+S ++  ++   C+ 
Sbjct: 512 GEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQ 571

Query: 498 RKLLFAFELLDELVIKESG 516
            ++  A +L+D L  K  G
Sbjct: 572 GEVKTAIQLVDRLTKKGEG 590



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 157/314 (50%), Gaps = 8/314 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL+++N +  Q+G   N   Y T++  L  Y K     +V ++M       +E  +  L+
Sbjct: 332 ALDLWNRMI-QEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLI 390

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHL 196
             F+         E+++K+  IT        + TC+ ++L  ++  + A + ++ +  + 
Sbjct: 391 DGFAKAGDLVGASEIWNKM--ITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIE-NMANG 447

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
              PNT  FN  IK  C  G  E A +VL +M++   + PN+ TY+ ++DGL    R RE
Sbjct: 448 NCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCA-PNVTTYNEVLDGLFNAKRTRE 506

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+++  E + + +I  + +TYN ++ GFC  G    A +I   +   G  P+   Y T++
Sbjct: 507 ALQIVGE-IEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVI 565

Query: 317 NGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
             +CK+G+++ A ++ D + K     PD   YT+L+   C    VDEA+  L +M   G 
Sbjct: 566 YAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGI 625

Query: 376 KADIVTFNIILGGL 389
             +  T+N ++ GL
Sbjct: 626 CPNRATWNALVRGL 639



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 5/249 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EI+N +    G   N   Y  ++D L R   F     ++  M    C  +   F   +
Sbjct: 402 ASEIWNKMITN-GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFI 460

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K        E  +++ +++       P++   +  L+ L  + +   A   +    + + 
Sbjct: 461 KGLCCSGKTEWAMKVLNQMRQYGC-APNVTTYNEVLDGLFNAKRTREALQIVG-EIEEME 518

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K N   +N ++   C  G  + A ++  ++     + P+ ITY+T+I   CK G  + A
Sbjct: 519 IKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGG-TKPDSITYNTVIYAYCKQGEVKTA 577

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           I+L + +  K +  PD  TY  L+ G C    VD A   ++ M N G  PN   +  L+ 
Sbjct: 578 IQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVR 637

Query: 318 G-FCKEGKL 325
           G F K G L
Sbjct: 638 GLFSKLGHL 646


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 147/246 (59%), Gaps = 2/246 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N  ++N +I   CK   +  A++   EM    + +PN+ITY+TLI G C  G+   A  L
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGI-FPNVITYTTLIGGFCLAGQLTGAFSL 249

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             EM+ K+ I P+  TY +LID  C+ GKV  AK ++  M   G   +V  YT+L++GFC
Sbjct: 250 LNEMILKN-INPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFC 308

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K   L +A  +F +MK + ++P+   YT LI+  C+ GR+ +A +L +++  +GC  D+ 
Sbjct: 309 KNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVC 368

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+N+++GGLC+EG ++EAL +  K+  +G   N  ++ I++    +K E +KA +LL  M
Sbjct: 369 TYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428

Query: 441 LCRGFL 446
           + +G L
Sbjct: 429 IAKGLL 434



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 187/381 (49%), Gaps = 10/381 (2%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           +L  MKH+S      + +E       +   +P+L  ++  +N      Q+  + + L   
Sbjct: 61  YLAKMKHYSTAISLSKQME-------VKGIEPNLVTLNILINCFCHLGQMSFSFSVLG-K 112

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
              L  +PNT     L+K  C +G ++ +     +   +Q    N ++Y TL++GLCK G
Sbjct: 113 ILKLGYQPNTITLTTLMKGLCLKGEVQKSVH-FHDKVVAQGFQMNQVSYGTLLNGLCKIG 171

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
             R AI+ F  M+       + + YN +IDG C+   V+ A      M   G  PNV  Y
Sbjct: 172 ETRCAIK-FLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITY 230

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TTL+ GFC  G+L  A  + +EM    + P+   Y  LI+  C+ G+V EA  LL EM  
Sbjct: 231 TTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHY 290

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           RG  AD+VT+  +L G C+   +++A  +  K+   GI  NK +Y  +++  C+ G L+ 
Sbjct: 291 RGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKD 350

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A +L + +L +G      T N ++  LCK GM ++A      + + G  P   ++ +++ 
Sbjct: 351 AQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIR 410

Query: 493 LICRGRKLLFAFELLDELVIK 513
            + +  +   A +LL E++ K
Sbjct: 411 SLFKKDENDKAEKLLHEMIAK 431



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 169/343 (49%), Gaps = 52/343 (15%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E Q ++   + V  Q GF  N  +Y T+L+ L                    CK  E   
Sbjct: 137 EVQKSVHFHDKVVAQ-GFQMNQVSYGTLLNGL--------------------CKIGE--- 172

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKY 191
                  + C++  + L M      I      L  +  +T ++ L +   V+ A +F  Y
Sbjct: 173 -------TRCAI--KFLRM------IEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDF--Y 215

Query: 192 SNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           S  + R + PN   +  LI   C  G L  AF +L EM    ++ PN+ TY+ LID LCK
Sbjct: 216 SEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNIN-PNVYTYAILIDALCK 274

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G+ +EA  L  EM  + Q   D +TY  L+DGFC+   +D+A  +   MK  G  PN +
Sbjct: 275 EGKVKEAKNLLAEMHYRGQP-ADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKY 333

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP---DTIGYTTLINCFCRAGRVDEALELL 367
            YT L++G CK G+L++A+++F ++   L+K    D   Y  +I   C+ G +DEAL + 
Sbjct: 334 TYTALIDGLCKGGRLKDAQKLFQDL---LVKGCCIDVCTYNVMIGGLCKEGMLDEALAIK 390

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            +M++ GC  ++VTF II+  L ++ + ++A  +L ++   G+
Sbjct: 391 SKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 102/207 (49%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  ++    K      A  +  +M+   ++P+ +    LINCFC  G++  +  +
Sbjct: 50  PPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSV 109

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ + G + + +T   ++ GLC +G++++++   +K+   G  +N+ SY  +LN  C+
Sbjct: 110 LGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCK 169

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            GE   AI+ LR++       +    N ++  LCK  +  +A      +   G  P   +
Sbjct: 170 IGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVIT 229

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  L+   C   +L  AF LL+E+++K
Sbjct: 230 YTTLIGGFCLAGQLTGAFSLLNEMILK 256



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 61/137 (44%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           VD+A+     M        IV F  ILG L +      A+ + +++   GI  N  +  I
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++N  C  G++  +  +L  +L  G+ P+  T   L+  LC  G  + +      +V  G
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 480 FKPESDSWALLVELICR 496
           F+    S+  L+  +C+
Sbjct: 153 FQMNQVSYGTLLNGLCK 169


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/313 (33%), Positives = 157/313 (50%), Gaps = 1/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN      LI   CK G  E AF +  ++ KS    PN+ TY+ +I G CK G+   A
Sbjct: 282 LKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARA 341

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L   MV +  + P+  TY  LIDG CRGG  DRA ++M  MK  G  PN++ Y  ++ 
Sbjct: 342 EMLLGRMVEQG-LAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK+GK+Q+A +V     +  L PD + YT LI   C+ G +  AL+L  +M E  C  
Sbjct: 401 GFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHP 460

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI T+  I+   C++ ++E++  + +K    G+   K +Y  ++   C+ G+   A+++ 
Sbjct: 461 DIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVF 520

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G LP   T   L+  LCK    E+A      +++    P   +   L    CR 
Sbjct: 521 ERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRR 580

Query: 498 RKLLFAFELLDEL 510
            K   A   LD L
Sbjct: 581 DKTTIAVSFLDGL 593



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 146/330 (44%), Gaps = 40/330 (12%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L  A ++L E++   +          L  GL +   F  A + F+ M     + PDA ++
Sbjct: 129 LREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM----GVRPDARSF 184

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
             L+ G C+ G+ + A  ++  M   G + +    T ++  FC++G+ ++   +F  M  
Sbjct: 185 RALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVE 244

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV----------------- 380
               P+ + YT  ++  C+ G V +A  +L+EM  +G K ++                  
Sbjct: 245 MGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTER 304

Query: 381 -------------------TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
                              T+ +++GG C+EGK+  A  +L ++   G+  N  +Y  ++
Sbjct: 305 AFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLI 364

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G  ++A EL+  M   GFLP+  T N ++   CK G  + A   L      G  
Sbjct: 365 DGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLC 424

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELV 511
           P+  ++ +L+   C+   + +A +L +++ 
Sbjct: 425 PDKVTYTMLITEHCKQGHITYALDLFNQMA 454



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 142/296 (47%), Gaps = 4/296 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F  + +   +  N  TY  ++    +  K    + +L +M  +    +   +  L+
Sbjct: 305 AFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLI 364

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    +R  E+ +K+  +    P++   +  +    +  ++  A   L+ +     
Sbjct: 365 DGHCRGGSFDRAFELMNKMK-LEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQ-G 422

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   + +LI  HCK+G +  A ++  +M ++   +P++ TY+T+I   C+  +  ++
Sbjct: 423 LCPDKVTYTMLITEHCKQGHITYALDLFNQMAENS-CHPDIDTYTTIIAMYCQQRQMEQS 481

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +LF++ +S   ++P   TY  +I G+CR GK   A K+ E M  +GC P+   Y  L++
Sbjct: 482 QQLFDKCLSIG-LVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALIS 540

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           G CKE +L+EA+ +F+ M +  + P  +   TL   +CR  +   A+  L  + +R
Sbjct: 541 GLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKR 596



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILG-GLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           R+ EA ++L E++  G    + T N +L  GL +      A    + +   G+  +  S+
Sbjct: 128 RLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSF 184

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LV 476
           R ++   CQ+G  E+A  LL  M   GF    AT   ++   C+ G   D    LFG +V
Sbjct: 185 RALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVP-GLFGRMV 243

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           EMG  P   ++   V+ +C+   +  AF +L+E+V K
Sbjct: 244 EMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGK 280


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 193/397 (48%), Gaps = 54/397 (13%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSN-QHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P     S  +  L E+ +V+ A  FL +   + + + P+   + ILI   CK G +E A 
Sbjct: 453 PDTSTYSKVITFLCEAMKVEKA--FLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510

Query: 223 EVLKEMKK-----SQMSY-----------------------------PNLITYSTLIDGL 248
               EM+      S ++Y                             PN ITYS L+DGL
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570

Query: 249 CKNGRFREAIELFEEMVSK---------------DQILPDALTYNVLIDGFCRGGKVDRA 293
           CK G  ++A E++ +M+                 D I P+ +TY  LIDG C+  KV  A
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDA 630

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           +++++ M +NGC PN   Y  L++GFCK GKL  A+EVF  M      P    YT+LI+ 
Sbjct: 631 QELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDA 690

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
             +  R+D A+++L +M E  C  ++VT+  ++ GLCR G+ ++AL +L  +   G   N
Sbjct: 691 MFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPN 750

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +++   + G+++ +++L   M+ +G  P+Y T   L+   C AG+ ++A   L 
Sbjct: 751 VVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLS 810

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            + +  +      +  +V+     +K + +  LL+EL
Sbjct: 811 EMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEEL 845



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 209/451 (46%), Gaps = 27/451 (5%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G + +  TY  +L    + K+      +  +M    C  +   +  L+         
Sbjct: 517 ESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGES 576

Query: 147 ERVLEMFHKIHPITRE---------------KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           ++  E++ K+   +                  P++      ++ L ++++V  AQ  L  
Sbjct: 577 QKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDV 636

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            + +   +PN  I++ LI   CK G L++A EV   M K     P + TY++LID + K+
Sbjct: 637 MSSN-GCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGY-LPTVHTYTSLIDAMFKD 694

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R   AI++  +M+ +    P+ +TY  +IDG CR G+  +A K++  M+  GCNPNV  
Sbjct: 695 RRLDLAIKVLSQML-ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVT 753

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT+L++G  K GK+  + ++F +M      P+ + Y  LIN  C AG +DEA  LL EMK
Sbjct: 754 YTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 813

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           +      +  +  ++ G  +  K   +LG+LE+L   G+      Y ++++   + G LE
Sbjct: 814 QTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLE 871

Query: 432 KAIELLRLML---CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           KA+EL + M+       +    T   L+  LC A   E A      +   G  PE  ++ 
Sbjct: 872 KALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFI 931

Query: 489 LLVELICRGRK----LLFAFELLDELVIKES 515
            L++ + +  K    L   + + DE V  +S
Sbjct: 932 CLIKGLIKVNKWNEALQLCYSMCDEGVNWQS 962



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 170/334 (50%), Gaps = 24/334 (7%)

Query: 200 PNTCIFNILIKHHCKRGTLES------AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           P   ++NI I   C    L S      A +V +EM  S     N +  +     LC  G+
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVL-NKVNTANFARCLCGMGK 435

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F +A ++ + M+ K   +PD  TY+ +I   C   KV++A  + + MK+ G  P+V+ YT
Sbjct: 436 FDKAFQIIKLMMRKG-FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++ FCK G +++A+  FDEM++    P  + YT L++ + +  +V +A ++   M + 
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKL----------WY------DGIYLNKASY 417
           GC  + +T++ ++ GLC+ G+ ++A  +  K+          +Y      D I  N  +Y
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++  C+  ++  A ELL +M   G  P++   + L+   CK G  ++A    F + +
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G+ P   ++  L++ + + R+L  A ++L +++
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQML 708



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/464 (22%), Positives = 198/464 (42%), Gaps = 50/464 (10%)

Query: 54  RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           R+   F++    +++++  + P+  +  F     Q G++H  A Y  + + L    +   
Sbjct: 96  RRHRDFLNDAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRART 155

Query: 114 VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
            + +LR++  E  +   G  LN++                  +    R     KA+    
Sbjct: 156 TERLLREIG-EDDREVLGRLLNVI------------------VRKCCRHGAWAKALEELG 196

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
            L                  +    +P+   +N L++     G ++  F V KEM  S++
Sbjct: 197 RL------------------KDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEM--SEL 236

Query: 234 SY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            +  +  T       LCK GR+ +A+     M+ ++    D +    +I G       D 
Sbjct: 237 GFCTDKFTVGCFAQALCKEGRWSDALV----MIEREDFKLDTVLCTQMISGLMEASLFDE 292

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A   +  M+ N C PNV  Y TL+ GF K+ +L   K +   M N    P+   + +L++
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVH 352

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC--REGKIEEALGMLEKLWYDGI 410
            +C A     A +LL  M   GC    V +NI +G +C   E    + L + EK++ + +
Sbjct: 353 SYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEML 412

Query: 411 ----YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
                LNK +        C  G+ +KA ++++LM+ +GF+P  +T ++++  LC+A   E
Sbjct: 413 ASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVE 472

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            A +    +  +G  P+  ++ +L++  C+   +  A    DE+
Sbjct: 473 KAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEM 516


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 184/355 (51%), Gaps = 21/355 (5%)

Query: 174 NLLIESN-QVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
            +LI+S  +V L Q   K+ ++ +R    PN   +  LI  + K   + SA E+  EM  
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-EMML 577

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL---------------PDAL 275
           S+   PN++TY+ LIDG CK+G+  +A +++  M     I                P+  
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TY  L+DG C+  KV  A+ +++ M   GC PN   Y  L++GFCK GKL EA+ VF +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 P+   Y++LI+   +  R+D AL++L  M E  C  +++ +  ++ GLC+ GK 
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EA  ++  +   G + N  +Y  +++   + G+++K +EL+R M  +G  P++ T   L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +   C AG+ +DA   L  + +  +      +  ++E     R+ + +  LLDE+
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEI 870



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 171/330 (51%), Gaps = 18/330 (5%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  ++ +I   C    +++AF + +EMK + +  P++ TY+ LID  CK G  ++A +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV-VPDVFTYTILIDSFCKVGLLQQARK 536

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F+EMV +D   P+ +TY  LI  + +  K+  A ++ E M + GC PNV  YT L++G 
Sbjct: 537 WFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 320 CKEGKLQEAKEVFDEMKNF----------------LLKPDTIGYTTLINCFCRAGRVDEA 363
           CK G++++A +++  M+                  +  P+   Y  L++  C+A +V EA
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            +LL  M   GC+ + + ++ ++ G C+ GK++EA  +  K+   G   N  +Y  +++ 
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             +   L+ A+++L  ML     P+     E++  LCK G  ++A   +  + E G  P 
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++  +++   +  K+    EL+ ++  K
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 211/439 (48%), Gaps = 24/439 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN----- 142
           + G   N  TY  ++    + +K  + + +   M  E C  +   +  L+          
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 143 --CSLHERV--------LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
             C ++ R+        ++M+ KI       P++      ++ L ++++V  A++ L   
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKN 251
           +     +PN  +++ LI   CK G L+ A  V  +M  S+  Y PN+ TYS+LID L K+
Sbjct: 663 SVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM--SERGYGPNVYTYSSLIDRLFKD 719

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R   A+++   M+ ++   P+ + Y  +IDG C+ GK D A ++M  M+  GC+PNV  
Sbjct: 720 KRLDLALKVLSRML-ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT +++GF K GK+ +  E+  +M      P+ + Y  LIN  C AG +D+A +LL EMK
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           +      +  +  ++ G  RE  I  +LG+L+++  +       +YRI+++  C+ G LE
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 432 KAIELLRLM-LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWAL 489
            A+EL + M  C  +          L+         D A  L+  +++ G  PE   +  
Sbjct: 897 LALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFY 956

Query: 490 LVELICRGRKLLFAFELLD 508
           LV+ + R  +   A +L D
Sbjct: 957 LVKGLIRINRWEEALQLSD 975



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 11/324 (3%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + L  KP+   +N L++   +   L++A+ V +EM  S  +     T    +  LCK GR
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY-TLGCFVHLLCKAGR 282

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           +REA+ L E    K++   D + Y  +I G C     + A   +  M+++ C PNV  Y 
Sbjct: 283 WREALALIE----KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G  ++ +L   K +   M      P    + +LI+ +CR+G    A +LLK+M + 
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 374 GCKADIVTFNIILGGLCREGKIE--EALGMLEKLWYD----GIYLNKASYRIVLNFSCQK 427
           GC+   V +NI++GG+C   K+   + L + EK + +     + LNK +   +    C  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G+ EKA  ++R M+ +GF+P  +T ++++  LC A   ++A +    +      P+  ++
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
            +L++  C+   L  A +  DE+V
Sbjct: 519 TILIDSFCKVGLLQQARKWFDEMV 542



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 161/369 (43%), Gaps = 59/369 (15%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR--EA 257
           P+  IFN LI  +C+ G    A+++LK+M       P  + Y+ LI G+C N +    + 
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQ-PGYVVYNILIGGICGNEKLPSLDV 425

Query: 258 IELFE----EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           +EL E    EM+    +L      N L    C  GK ++A  I+  M + G  P+   Y+
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++   C   K+  A  +F+EMK+  + PD   YT LI+ FC+ G + +A +   EM   
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  ++VT+  ++    +  K+  A  + E +  +G   N  +Y  +++  C+ G++EKA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 434 IE---------------------------------------------------LLRLMLC 442
            +                                                   LL +M  
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G  P++   + L+   CK G  ++A +    + E G+ P   +++ L++ + + ++L  
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724

Query: 503 AFELLDELV 511
           A ++L  ++
Sbjct: 725 ALKVLSRML 733



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 148/323 (45%), Gaps = 48/323 (14%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           +F  +SE +G+  N  TY++++D+L + K+ +    VL +M   +C  +  I+  ++   
Sbjct: 693 VFTKMSE-RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751

Query: 141 SNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                 +      +++  +  EK   P++   +  ++   ++ +VD     ++       
Sbjct: 752 CKVGKTDEA----YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK-G 806

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFRE 256
             PN   + +LI H C  G L+ A ++L EMK  Q  +P ++  Y  +I+G   N  F  
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK--QTYWPKHMAGYRKVIEGF--NREFII 862

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           ++ L +E ++++  +P    Y +LID FC+ G+++ A ++ + M +  C     +Y+   
Sbjct: 863 SLGLLDE-IAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS--CT----SYSA-- 913

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
                                     D   Y++LI     A +VD+A EL  +M +RG  
Sbjct: 914 -------------------------ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948

Query: 377 ADIVTFNIILGGLCREGKIEEAL 399
            ++  F  ++ GL R  + EEAL
Sbjct: 949 PELSIFFYLVKGLIRINRWEEAL 971



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 3/191 (1%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G    A E    +K+   KP  + Y  L+  F  A R+D A  + +EM + G   D 
Sbjct: 208 CRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDG 267

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T    +  LC+ G+  EAL ++EK   +   L+   Y  +++  C+    E+A++ L  
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSR 324

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M     +P+  T   LL    +          L  ++  G  P    +  L+   CR   
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 500 LLFAFELLDEL 510
             +A++LL ++
Sbjct: 385 YSYAYKLLKKM 395


>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           viburnoides]
          Length = 431

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+G CK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGXCKESKXDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ + +  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K  +A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC  G + DA   L
Sbjct: 316 DKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 146/261 (55%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK    + A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN + ++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 232 NELFDEMLVKGL-VPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M     +
Sbjct: 290 YGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C  GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 113/191 (59%), Gaps = 2/191 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   F  LI  HCK G ++ A E+ K+M    +S P+LITY+TLI GLCK G  ++A
Sbjct: 243 LVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQA 301

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM  K  + PD +TY  LIDG C+ G +D A +  + M       +   YT L++
Sbjct: 302 HHLIDEMSXKG-LKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALIS 360

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C EG+  +A+++  EM +  LKPD   YT +IN FC+ G V +  +LLKEM+  G   
Sbjct: 361 GLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420

Query: 378 DIVTFNIILGG 388
            +VT+N+++ G
Sbjct: 421 SVVTYNVLMNG 431



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 140/321 (43%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 18  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E +                   G
Sbjct: 78  LITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ G C+E K ++A  + +++   G+  N   +  +++  
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 ITYTTLIDGCCKEGDLDXAFE 338



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/299 (19%), Positives = 123/299 (41%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E   +Q S  +J  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAIXETXGTQRS--DJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVP-- 106

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E +           Y  L+ GF            ++E
Sbjct: 107 ---------------FDTCRKVLEHLMK-------LKYFKLVWGF------------YEE 132

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G 
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++ + + A EL   ML +G +P+      
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTT 252

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK G  + A      ++     P+  ++  L+  +C+   L  A  L+DE+  K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXK 311


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 224/441 (50%), Gaps = 19/441 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-------TYETCKFHE 130
           AL++FN ++++ G   N  TY+T+++ L    +      ++R+M       T  TC    
Sbjct: 269 ALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT--- 324

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           G  + L     +   +E    +F  +     E P++   +  ++ L  S  + +A     
Sbjct: 325 GPIIAL----CDMGCYEDAWRLFVDMKNKGCE-PNVYTYTALISGLCVSGLLKVAIGLFH 379

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
             ++   + PNT  +N LI    +   ++ AF VL  M ++  S PN++TY+ +I G C 
Sbjct: 380 RMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS-PNIVTYNEMIKGYCI 437

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G  ++A+ +   M+ +     + +TYN +I G+C  G    A +I++ M++ GC P+ +
Sbjct: 438 LGDPKKAMLVMNNMLQRGHS-ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +YT L+ GFCK  K++ A  +F+EM +  L P+ + YT LI+ +C+  ++D A  LL+ M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           K  GC+ ++ T+N+++ GL ++     A  + + +  +GI+ N  +Y  +++  C+ G  
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+E+   M+ +G LP+  T + L+  L + G  E+A      L   G  P+  ++  +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676

Query: 491 VELICRGRKLLFAFELLDELV 511
           +E      K+  AF  L  ++
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMI 697



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 212/437 (48%), Gaps = 22/437 (5%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q  L I+N V      + N A   TI+ K+     FE+      +M+ +T  +   I  +
Sbjct: 212 QPNLLIYNAVINALCKDGNVADAETIMKKV-----FES------EMSPDTFTYTSMILGH 260

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             KH  + +L     ++F+++     E P+    ST +N L +S +V+ A + ++    H
Sbjct: 261 CRKHDLDSAL-----QVFNQMAKEGCE-PNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 196 LRLK-PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
             L   +TC   I+    C  G  E A+ +  +MK      PN+ TY+ LI GLC +G  
Sbjct: 315 GILPTAHTCTGPIIAL--CDMGCYEDAWRLFVDMKNKGCE-PNVYTYTALISGLCVSGLL 371

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           + AI LF  M S+D + P+ +TYN LI+      ++  A  ++  M  NGC+PN+  Y  
Sbjct: 372 KVAIGLFHRM-SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G+C  G  ++A  V + M       + + Y T+I  +C +G    AL +L  M++ G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           CK D  ++  ++ G C+  K+E A G+  ++  DG+  N+ +Y  +++  C+  +L+ A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            LL  M   G  P+  T N L+  L K      A      ++E G  P   ++  +++ +
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 495 CRGRKLLFAFELLDELV 511
           C+      A E+ ++++
Sbjct: 611 CKNGSTSLALEMFNKMI 627



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 136/256 (53%), Gaps = 2/256 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N +IK +C  G   SA  +L  M+      P+  +Y+ LI G CK  +   A  L
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK-PDEWSYTELICGFCKISKMESAFGL 517

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F EMV  D + P+ +TY  LIDG+C+  K+D A  ++E MK +GC PNV  Y  L++G  
Sbjct: 518 FNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+     A+E+   M    + P+ + YT +I+  C+ G    ALE+  +M E+GC  +++
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++  L +EGK+EEA  +  +L   G+  ++ +Y  ++      G++E A   L  M
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 441 LCRGFLPHYATSNELL 456
           +  G  P   T   L+
Sbjct: 697 IKAGCQPTLWTYGVLI 712



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 151/304 (49%), Gaps = 2/304 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ L+ H  + G   +  +    M  S+   PNL+ Y+ +I+ LCK+G   +A E   + 
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRML-SEGVQPNLLIYNAVINALCKDGNVADA-ETIMKK 240

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V + ++ PD  TY  +I G CR   +D A ++   M   GC PN   Y+TL+NG C  G+
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA ++  EM    + P     T  I   C  G  ++A  L  +MK +GC+ ++ T+  
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC  G ++ A+G+  ++  DG++ N  +Y  ++N   +   ++ A  +L LM   G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+  T NE++   C  G  + A + +  +++ G      ++  +++  C       A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 505 ELLD 508
            +LD
Sbjct: 481 RILD 484



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M+S+  +      Y+ L+    R G           M + G  PN+  Y  ++N  C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+G + +A+ +  ++    + PDT  YT++I   CR   +D AL++  +M + GC+ + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++ GLC  G++ EA  ++ ++   GI     +    +   C  G  E A  L   M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRK 499
             +G  P+  T   L+  LC +G+ +  AI LF  +   G  P + ++  L+ ++   R+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLK-VAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 500 LLFAFELLD 508
           + +AF +L+
Sbjct: 406 IKYAFVVLN 414



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 196/447 (43%), Gaps = 29/447 (6%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P+ A+ + N +  Q+G + N  TY TI+          +   +L  M    CK  E  +
Sbjct: 440 DPKKAMLVMNNML-QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             L+  F   S  E    +F+++       P+    +  ++   +  ++D A + L++  
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +    +PN   +N+LI    K+     A E+ K M +  + +PN++TY+ +IDGLCKNG 
Sbjct: 558 RS-GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI-FPNVVTYTAMIDGLCKNGS 615

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              A+E+F +M+ +   LP+ LTY+ LI    + GKV+ A+ +   ++ +G  P+   Y 
Sbjct: 616 TSLALEMFNKMIEQG-CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI---------------------- 351
            ++  +   GK++ A      M     +P    Y  LI                      
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVP 734

Query: 352 NC-FCRAGRVDEALELLK-EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           NC F       +A+ ++  ++ E      +   N ++  L   G+  EA  +L  +   G
Sbjct: 735 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 794

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  ++ +Y  +L    +   ++ A+ + + M  +G   H     EL+  LC+    ++A 
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEAR 854

Query: 470 IALFGLVEMGFKPESDSWALLVELICR 496
           I    ++   + P+    A+L++ + R
Sbjct: 855 ITFENMLMRTWNPDDVVQAVLIDGLLR 881



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 100/219 (45%)

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
           R    ++ +  +G    +F Y+ L+    + G      + +  M +  ++P+ + Y  +I
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+ G V +A  ++K++ E     D  T+  ++ G CR+  ++ AL +  ++  +G  
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y  ++N  C  G + +A +L+R M+  G LP   T    ++ LC  G  EDA   
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +   G +P   ++  L+  +C    L  A  L   +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           + L+  L   GR+ EA EL   M+S+  + PD   YN L+    R   VD A  + + M 
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQG-LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC  ++  Y  L+   C+  + +EA+  F+ M      PD +    LI+   R G  D
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 362 EALELLKEMKER 373
             +E L  M+ R
Sbjct: 887 LCMEFLHIMETR 898



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/149 (17%), Positives = 67/149 (44%)

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           +  L  + + G +  +  ++ +L  L R G     +    ++  +G+  N   Y  V+N 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G +  A  +++ +      P   T   +++  C+    + A      + + G +P 
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVI 512
           + +++ L+  +C   ++  AF+L+ E+++
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMIL 313



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 2/118 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N L+    +   ++ A  V K M  +Q    +L  Y  LI  LC+  R +EA
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS-TQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
              FE M+ +    PD +   VLIDG  R G  D   + +  M+     P+   YT L
Sbjct: 854 RITFENMLMRTWN-PDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 162/288 (56%), Gaps = 3/288 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PSL   +  ++   +  ++ LAQ       +   L+P+   FN L+  + + G L+  F 
Sbjct: 134 PSLYFFNILMHRFCKEGEMRLAQMVFDAITK-WSLRPSVVSFNTLMNGYIRLGDLDEGFR 192

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +   M  + +  P++ TYS LI+GLCK  +  EA E+  EM+  + ++P+ +T+  LIDG
Sbjct: 193 LKSAMHATGVQ-PDVYTYSVLINGLCKESKMDEANEMLNEMLD-NGLVPNGVTFTTLIDG 250

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ GKVD A +I + M + G  P++  Y TL+ G C+ G L +A+++ +EM    LKPD
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I YTTLI+  C+ G ++   EL K M     + D VT+  ++ GLCREG+  +A  ML 
Sbjct: 311 KITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLR 370

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           ++   G+  +  +Y +++N  C+ G+++ A +LLR M   G +P   T
Sbjct: 371 EMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 161/275 (58%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+L  ++ L+   CK G  R A  +F+  ++K  + P  +++N L++G+ R G +D   +
Sbjct: 134 PSLYFFNILMHRFCKEGEMRLAQMVFDA-ITKWSLRPSVVSFNTLMNGYIRLGDLDEGFR 192

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M   G  P+V+ Y+ L+NG CKE K+ EA E+ +EM +  L P+ + +TTLI+  C
Sbjct: 193 LKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHC 252

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+VD A+E+ K+M  +G   D++T+N ++ GLCR G + +A  ++E++   G+  +K 
Sbjct: 253 KNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKI 312

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++ SC++G+LE   EL + M+         T   L+  LC+ G A DA   L  +
Sbjct: 313 TYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREM 372

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           + +G KP++ ++ +++   C+   +  A +LL E+
Sbjct: 373 LTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREM 407



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 168/329 (51%), Gaps = 28/329 (8%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  +++    K  T  + F  + E K +Q+S  +L  +S L+    ++G  
Sbjct: 26  HQMLVEAKSLIRVVVSRKGKDST-SAVFAAILETKGTQIS--DLYVFSGLMLAYLESGFV 82

Query: 255 REAIELFEEMVSKDQILPD------------ALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           R+AI+ F  +  K +I                L Y  L+ GF         K+I+E    
Sbjct: 83  RDAIQCFR-LTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGF--------YKEILEC--- 130

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            G  P+++ +  LM+ FCKEG+++ A+ VFD +  + L+P  + + TL+N + R G +DE
Sbjct: 131 -GYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDE 189

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
              L   M   G + D+ T+++++ GLC+E K++EA  ML ++  +G+  N  ++  +++
Sbjct: 190 GFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLID 249

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+ G+++ A+E+ + ML +GFLP   T N L+  LC+ G    A   +  ++  G KP
Sbjct: 250 GHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKP 309

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELV 511
           +  ++  L++  C+   L   FEL   ++
Sbjct: 310 DKITYTTLIDGSCKEGDLEITFELRKRMI 338


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 172/319 (53%), Gaps = 4/319 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN  I+N+++   CK G +  A ++  ++    +  P++ TY+ LI G C  G++RE 
Sbjct: 214 VRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGID-PDVFTYTCLIHGFCGLGQWREV 272

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L  +MV ++  L +  TYN+LID  C+ G + +A  +   M   G  P++  + TLM+
Sbjct: 273 TRLLCDMVDRNVNL-NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMS 331

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C    + EA+++FD      + PD   Y  LI  +C+  R+DEAL L  +M  +    
Sbjct: 332 GYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAP 391

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +IVT++ ++ GLC+ G+I  A  +   +   G   N  +Y I+L+  C+   ++KAIEL 
Sbjct: 392 NIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELF 451

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            LM  RG  P+ ++ N L+   CK+   ++A      +      P+S ++  L++ +C+ 
Sbjct: 452 NLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKS 511

Query: 498 RKLLFAFELLDELVIKESG 516
            ++  A+EL +  V+ + G
Sbjct: 512 GRISHAWELFN--VMHDGG 528



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 166/307 (54%), Gaps = 4/307 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI   CK G    AFE+L +M+  Q+  PN++ Y+ ++DGLCK+G   EA +L+ ++
Sbjct: 186 YGTLINGLCKIGLTREAFELLHKME-GQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDV 244

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V +  I PD  TY  LI GFC  G+     +++  M +   N NV+ Y  L++  CK+G 
Sbjct: 245 VGRG-IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGM 303

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +A ++ + M     +PD + + TL++ +C    V EA +L     E G   D+ ++NI
Sbjct: 304 LGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNI 363

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+  +I+EAL +  K+ Y  +  N  +Y  +++  C+ G +  A EL   +   G
Sbjct: 364 LIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGG 423

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLV-EMGFKPESDSWALLVELICRGRKLLFA 503
             P+  T N +L  LCK  +  D AI LF L+ E G  P   S+ +L+   C+ +++  A
Sbjct: 424 PSPNVITYNIMLDALCKIQLV-DKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEA 482

Query: 504 FELLDEL 510
             L +E+
Sbjct: 483 MNLFEEM 489



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 125/224 (55%), Gaps = 2/224 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   FN L+  +C    +  A ++     +  ++ P++ +Y+ LI G CKN R  EA+
Sbjct: 320 RPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT-PDVWSYNILIIGYCKNNRIDEAL 378

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            LF +M  K ++ P+ +TY+ LIDG C+ G++  A ++   + + G +PNV  Y  +++ 
Sbjct: 379 SLFNKMNYK-KLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDA 437

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK   + +A E+F+ M    L P+   Y  LIN +C++ R+DEA+ L +EM  R    D
Sbjct: 438 LCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPD 497

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            VT+N ++ GLC+ G+I  A  +   +   G  ++  +Y I+ +
Sbjct: 498 SVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFD 541



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 2/315 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FN+++    K     +A  + K+M    ++ P+++T S LI+  C  G    A  
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGIT-PSIVTLSILINCYCHLGHMGFAFS 134

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   MV K     +A+T   ++ G C  G+V +A +  + +   G   +   Y TL+NG 
Sbjct: 135 VLG-MVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGL 193

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G  +EA E+  +M+  +++P+ + Y  +++  C+ G V EA +L  ++  RG   D+
Sbjct: 194 CKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDV 253

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+  ++ G C  G+  E   +L  +    + LN  +Y I+++  C+KG L KA ++  L
Sbjct: 254 FTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNL 313

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+ RG  P   T N L+   C      +A        E G  P+  S+ +L+   C+  +
Sbjct: 314 MIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNR 373

Query: 500 LLFAFELLDELVIKE 514
           +  A  L +++  K+
Sbjct: 374 IDEALSLFNKMNYKK 388



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 7/191 (3%)

Query: 174 NLLI----ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           N+LI    ++N++D A +     N + +L PN   ++ LI   CK G +  A+E+   + 
Sbjct: 362 NILIIGYCKNNRIDEALSLFNKMN-YKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIH 420

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
               S PN+ITY+ ++D LCK     +AIELF  M  +  + P+  +YN+LI+G+C+  +
Sbjct: 421 DGGPS-PNVITYNIMLDALCKIQLVDKAIELFNLMFERG-LTPNVSSYNILINGYCKSKR 478

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +D A  + E M      P+   Y  L++G CK G++  A E+F+ M +     D I Y  
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538

Query: 350 LINCFCRAGRV 360
           L + F +   V
Sbjct: 539 LFDAFSKIQHV 549



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+ LF  +++    LP  + +N+++    +      A  + + M   G  P++   + L
Sbjct: 61  DAVALFTRLITMHP-LPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +N +C  G +  A  V   +     + + I  TT++   C  G V +ALE    +  +G 
Sbjct: 120 INCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGF 179

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D VT+  ++ GLC+ G   EA  +L K+    +  N   Y ++++  C+ G + +A +
Sbjct: 180 LLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARD 239

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   ++ RG  P   T   L+   C  G   +    L  +V+        ++ +L++ +C
Sbjct: 240 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC 299

Query: 496 R 496
           +
Sbjct: 300 K 300



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 83/187 (44%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A  +F  +      P  + +  ++    +      A+ L K+M  RG    IVT +I
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C  G +  A  +L  +   G  LN  +   ++   C  GE+ KA+E    ++ +G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           FL    T   L+  LCK G+  +A   L  +     +P    + ++V+ +C+   +  A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 505 ELLDELV 511
           +L  ++V
Sbjct: 239 DLYSDVV 245


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 164/287 (57%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+      +   L+P+   FN L+  + K G L   F +
Sbjct: 135 SLYFFNILMHGFVKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A  LF+EM+ K  ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANVLFDEMLDKG-LVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           I YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G+ P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+ G  K G  R A  +F+  ++K  + P  +++N L++G+ + G ++ 
Sbjct: 131 GYPASLYFFNILMHGFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLNE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A  +FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 148/278 (53%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHGFVKEGEIRLAQSVFDAITKWGLR-PSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A  + + M + G  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+KP
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 160/319 (50%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + N   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEENLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+GF KEG+++ A+ VFD +  + L+P  + + TL+N + + G ++E   L
Sbjct: 134 ASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  ++  G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 114/279 (40%), Gaps = 65/279 (23%)

Query: 251 NGRFREAIELFEEMVS---KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN- 306
           N  FR  ++ +  M+      Q+LP+A T   ++    R GK   +      ++  G   
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIV--VSRKGKGSASAVFAAILETKGTQR 63

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMK--NFLLKPDTIGYTTLINCFCRAGRVDEAL 364
            +++ ++ L+  + + G L++A E +   K   F +  DT          CR  +V E L
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT----------CR--KVLEHL 111

Query: 365 ELLKEMK----------ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
             LK  K          E G  A +  FNI++ G  +EG+I  A  + + +   G+  + 
Sbjct: 112 MKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            S+  ++N   + G+L +           GF            RL  A  A         
Sbjct: 172 VSFNTLMNGYIKLGDLNE-----------GF------------RLKNAMQAS-------- 200

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               G +P+  ++++L+  +C+  K+  A  L DE++ K
Sbjct: 201 ----GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDK 235


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 199/394 (50%), Gaps = 41/394 (10%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ---------------------H 195
           HP  R +PS  +++  L  L+ + +VDLA+   + + +                      
Sbjct: 149 HP--RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206

Query: 196 LR-------------LKPNTCIFNILIKHHCKRGTLESAFEV---LKEMKKSQMSYPNLI 239
           LR             L P+   +N LI  +CK+G   + + V   LKEM ++ +S P  +
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGIS-PTAV 265

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T+  LI+G CKN     A+ +FEEM  +  I    +TYN LI G C  GKV+   K+ME 
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEE 324

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M++ G +PN   +  ++ GFCK+G + +A +  D M    ++PD + Y  LI+ + R G+
Sbjct: 325 MEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGK 384

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A+ + + M ++G   ++ T+N ++ G  R G    A G+L+++   GI  +  +Y +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C KGE+ KA++LL  M   G  P++ T N ++   C  G  + A      + +  
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +    ++ + ++  C+  K+  A +LL+E++ K
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 13/345 (3%)

Query: 90  GFNHNNATYATILD---KLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNC 143
           G   + ATY +++D   K         VD +L++M            G+ +N     SN 
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +   RV E   K   I     S+   ++ ++ L    +V+     ++   + L L PN  
Sbjct: 281 AAAVRVFEEM-KQQGIA---ASVVTYNSLISGLCSEGKVEEGVKLME-EMEDLGLSPNEI 335

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            F  ++K  CK+G +  A + +  M +  +  P+++ Y+ LID   + G+  +A+ + E 
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVE-PDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M +K  I P+  TYN LI GF R G    A  +++ MK  G   +V  Y  L+   C +G
Sbjct: 395 M-AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++++A ++ DEM    L+P+ + Y T+I  FC  G +  A E+   M++   +A++VT+N
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           + +   C+ GK++EA  +L ++    +  N  +Y  +     +KG
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 2/203 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+  I+NILI  + + G +E A  V + M K  +S PN+ TY+ LI G  ++G +R A
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS-PNVTTYNCLITGFSRSGDWRSA 423

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM  K  I  D +TYNVLI   C  G+V +A K+++ M   G  PN   Y T++ 
Sbjct: 424 SGLLDEMKEKG-IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC +G ++ A E+   M+    + + + Y   I  FC+ G++DEA +LL EM ++    
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 378 DIVTFNIILGGLCREGKIEEALG 400
           + +T+  I  G+  +G   +  G
Sbjct: 543 NGITYETIKEGMMEKGYTPDIRG 565


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 179/334 (53%), Gaps = 24/334 (7%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN   FN+++K  C+ G +E A  +++ MKK   ++ +L +Y+T + GL +NG+  E  
Sbjct: 290 KPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGG-NFVSLESYNTWLLGLLRNGKLLEGR 348

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + +EMV ++ I P+  +YN+++DG CR   +  A+++M+ M +NG  P+   YTTL++G
Sbjct: 349 SVLDEMV-ENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHG 407

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +C +GK+ EAK + +EM      P+T    TL+N   + GR  EA E+L++M E+  + D
Sbjct: 408 YCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLD 467

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGI-YLNKA---------------------S 416
            VT NI++ GLCR G++E+A  ++ ++W DG   L K                      +
Sbjct: 468 TVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVIT 527

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++N  C+ G+LE+A +    M+ +   P   T +  ++  CK G    A   L  + 
Sbjct: 528 YTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDME 587

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             G      ++  L+  +    ++   + L+DE+
Sbjct: 588 RNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEM 621



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 163/287 (56%), Gaps = 25/287 (8%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  +  L+  +C +G +  A  +L EM + +  +PN  T +TL++ L K GR  EA E
Sbjct: 396 PDTVTYTTLLHGYCSKGKVFEAKAILNEMIR-KGCHPNTYTCNTLLNSLWKEGRKSEAEE 454

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN------------- 306
           + ++M  K   L D +T N++++G CR G++++A +++  M  +G N             
Sbjct: 455 MLQKMNEKSYQL-DTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVN 513

Query: 307 ---------PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
                    P+V  YTTL+NG CK GKL+EAK+ F EM    L PD++ Y T +  FC+ 
Sbjct: 514 SIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQ 573

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G++  AL +LK+M+  GC   + T+N ++ GL  +G+I E  G+++++   GI+ +  +Y
Sbjct: 574 GKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTY 633

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR-LCKAG 463
             ++N  C+ G+ + A  LL  ML +G +    +S ++L++  CK+G
Sbjct: 634 NNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSG 680



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 181/360 (50%), Gaps = 28/360 (7%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P+    +T LN L +  +   A+  L+  N+   +L   TC  NI++   C+ G LE A 
Sbjct: 431 PNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTC--NIVVNGLCRNGELEKAS 488

Query: 223 EVLKEM---------------------KKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           EV+ EM                          + P++ITY+TLI+GLCK G+  EA + F
Sbjct: 489 EVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKF 548

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            EM++K+ + PD++TY+  +  FC+ GK+  A ++++ M+ NGC+  +  Y +L+ G   
Sbjct: 549 IEMMAKN-LHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGS 607

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC-KADIV 380
           +G++ E   + DEM+   + PD   Y  +INC C  G+  +A  LL EM ++G    ++ 
Sbjct: 608 KGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVS 667

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           +F I++   C+ G  + A  + + +        +A Y ++ N     G+L  A EL    
Sbjct: 668 SFKILIKAFCKSGDFKVACELFD-VALSVCGHKEALYSLMFNELLAGGKLSDAKELFEAS 726

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE-LICRGRK 499
           L R  L       +L+ +LCK G  +DA   L  L++ G+  +  S+  +++ L  RG K
Sbjct: 727 LERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNK 786



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 156/307 (50%), Gaps = 9/307 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P T  FN+LI+  C+   L+ A E+  +M + +   PN  T   L+ G C+ GR ++A
Sbjct: 147 VNPETYTFNLLIQSLCESNALDHARELFDKMSE-KGCQPNKFTVGILVRGFCRAGRTKQA 205

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +E  +  +  +    + + YN L+  FC+    D A+K++E M   G  P+V  + + ++
Sbjct: 206 LEFVDGKMGGN---VNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRIS 262

Query: 318 GFCKEGKLQEAKEVFDEMKN----FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
             C+ GK+ EA  +F +M+      L KP+ + +  ++  FC+ G ++EA  L++ MK+ 
Sbjct: 263 ALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKG 322

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G    + ++N  L GL R GK+ E   +L+++  +GI  N  SY IV++  C+   +  A
Sbjct: 323 GNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDA 382

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW-ALLVE 492
             L+ LM+  G  P   T   LL   C  G   +A   L  ++  G  P + +   LL  
Sbjct: 383 RRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNS 442

Query: 493 LICRGRK 499
           L   GRK
Sbjct: 443 LWKEGRK 449



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 152/283 (53%), Gaps = 9/283 (3%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P   T++ LI  LC++     A ELF++M S+    P+  T  +L+ GFCR G   R K+
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKM-SEKGCQPNKFTVGILVRGFCRAG---RTKQ 204

Query: 296 IMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            +EF+    G N N   Y TL++ FCK+    EA+++ + M    L PD + + + I+  
Sbjct: 205 ALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISAL 264

Query: 355 CRAGRVDEALELLKEMKERG----CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           CRAG+V EA  + ++M+  G     K ++VTFN++L G C+EG +EEA  ++E +   G 
Sbjct: 265 CRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGN 324

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           +++  SY   L    + G+L +   +L  M+  G  P+  + N ++  LC+  M  DA  
Sbjct: 325 FVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARR 384

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +  +V  G  P++ ++  L+   C   K+  A  +L+E++ K
Sbjct: 385 LMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRK 427



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 159/294 (54%), Gaps = 7/294 (2%)

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNI 207
           V  + + IH ++   P +   +T +N L +  +++ A+  F++   ++L   P++  ++ 
Sbjct: 508 VAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLH--PDSVTYDT 565

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            + + CK+G + SA  VLK+M+++  S   L TY++LI GL   G+  E   L +EM  +
Sbjct: 566 FVLNFCKQGKISSALRVLKDMERNGCS-KTLQTYNSLILGLGSKGQIFEMYGLMDEMRER 624

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC-NPNVFNYTTLMNGFCKEGKLQ 326
             I PD  TYN +I+  C GGK   A  ++  M + G  +PNV ++  L+  FCK G  +
Sbjct: 625 G-IHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFK 683

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A E+FD   +     + + Y+ + N     G++ +A EL +   ER   +    +  ++
Sbjct: 684 VACELFDVALSVCGHKEAL-YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLI 742

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
             LC++G++++A G+L+KL   G   + +S+  V++   ++G  ++A EL R+M
Sbjct: 743 DKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIM 796


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 227/488 (46%), Gaps = 38/488 (7%)

Query: 56  RSRFISHGAAIS----LIKC---EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARY 108
           R RF      IS    L +C   E    C + ++  ++  +       T+  ++  L   
Sbjct: 108 RDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAR-VKPQTYTFNLLISALCEM 166

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
              E    V  +M+ + CK +E     L++ +    LH   +++  ++   +   P+  A
Sbjct: 167 GYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRS-SGALPNRVA 225

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +T ++ L    Q   A+  ++   + + L P+   FN  I   CK G +  A  + ++M
Sbjct: 226 YNTVISSLCGEGQTVEAEKLVE-KMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDM 284

Query: 229 KKSQ---MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
           +  +   +  PN +TY+ +++G C  G F EA  +F+ M + + +     +YN+ + G  
Sbjct: 285 QIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL--SLRSYNIWMLGLV 342

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           R GK+  A  I+  M      PN+++Y  L++G CK G   +A+ +   M+   + PDT+
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y+TL++ +CR G++ EA  +L+EM + GC  ++ T NI+L  L +EG+  EA  +L+ +
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF-------------------- 445
              G  L+  +   ++N  C+ G L+KAIE++  M  RG                     
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNG 522

Query: 446 ---LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
              LP   T   ++  LCK G  ++A   L  ++     P+S  +   +   C+  KL  
Sbjct: 523 KKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSS 582

Query: 503 AFELLDEL 510
           AF +L E+
Sbjct: 583 AFRVLKEM 590



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 197/387 (50%), Gaps = 19/387 (4%)

Query: 143 CSLHERVLE---MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRL 198
           CSL E  ++     +K   + R KP     +  ++ L E   ++ A+  F K S +    
Sbjct: 127 CSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGC-- 184

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN     IL++ +C+ G      ++L EM+ S  + PN + Y+T+I  LC  G+  EA 
Sbjct: 185 KPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG-ALPNRVAYNTVISSLCGEGQTVEAE 243

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG----CNPNVFNYTT 314
           +L E+M  +  + PD +T+N  I   C+ G++  A +I   M+ +       PN   Y  
Sbjct: 244 KLVEKM-REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNL 302

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG---YTTLINCFCRAGRVDEALELLKEMK 371
           ++ GFC EG  +EA+ +FD MKN     +T+    Y   +    R+G++ EA  +L EM 
Sbjct: 303 MLEGFCSEGMFEEARAIFDSMKN----SETLSLRSYNIWMLGLVRSGKLLEAHLILNEMA 358

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+  K ++ ++NI++ GLC+ G   +A  +L  +   G+  +  +Y  +L+  C++G++ 
Sbjct: 359 EKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKIL 418

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +A  +LR M+  G  P+  T N LL  L K G A +A   L  + E G+  ++ +   ++
Sbjct: 419 EANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMI 478

Query: 492 ELICRGRKLLFAFELLDELVIKESGTI 518
             +C+   L  A E++  +  + S ++
Sbjct: 479 NGLCKAGNLDKAIEIVSGMWTRGSASL 505



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 200/413 (48%), Gaps = 38/413 (9%)

Query: 85  VSEQKGF-NHNNATYATILDKLARYKKFEAVDAVLRQMTYE---TCKFHEGIFLNLMKHF 140
           + E+ G    N  TY  +L+       FE   A+   M      + + +    L L++  
Sbjct: 286 IDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSG 345

Query: 141 SNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
                H  + EM  K       KP+L + +  ++ L +      A++ L    +   + P
Sbjct: 346 KLLEAHLILNEMAEK-----NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRES-GVAP 399

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T  ++ L+  +C+RG +  A  VL+EM +    +PN+ T + L+  L K GR  EA +L
Sbjct: 400 DTVTYSTLLHGYCRRGKILEANYVLREMIQVG-CFPNMYTCNILLHSLWKEGRASEAEDL 458

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-------------------- 300
            + M  +   L D +T N +I+G C+ G +D+A +I+  M                    
Sbjct: 459 LQMMNERGYGL-DNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFD 517

Query: 301 -KNNG--CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
            +NNG  C P+   Y T++ G CK G++ EAK+   EM    L PD++ + T I  +C+ 
Sbjct: 518 IRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQ 577

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G++  A  +LKEM+++GC   + T+N ++ GL  E +I E  G+++++   GI+ N  +Y
Sbjct: 578 GKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTY 637

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL---VRLCKAGMAED 467
             +++   + G+L+ A  LL  ML +G  P+  T   L+    + C  G A++
Sbjct: 638 NNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQE 690



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 40/448 (8%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           I N ++E K    N  +Y  ++  L +Y  F    ++L  M           +  L+  +
Sbjct: 353 ILNEMAE-KNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGY 411

Query: 141 SNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH-LR 197
                  ++LE  + +  + +    P++   +  L+ L +  +   A++ L+  N+    
Sbjct: 412 CR---RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYG 468

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM----------------------KKSQMSY 235
           L   TC  N +I   CK G L+ A E++  M                         +   
Sbjct: 469 LDNVTC--NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCL 526

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+ ITY+T+I GLCK GR  EA +   EM+ K ++ PD+L ++  I  +C+ GK+  A +
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGK-KLSPDSLIFDTFIYNYCKQGKLSSAFR 585

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ M+  GCN ++  Y +L+ G   E ++ E   + DEMK   + P+   Y  +I+C  
Sbjct: 586 VLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLS 645

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL--- 412
             G++ +A  LL EM ++G   +I TF I++G   +        G  ++L+   + L   
Sbjct: 646 EGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACD----FGAAQELFEIALSLCGH 701

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
            ++ Y  + N     GE  KA EL    L R          +L+ +LCK G  +DA+  L
Sbjct: 702 KESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFIL 761

Query: 473 FGLVEMGFKPESDSWALLV-ELICRGRK 499
             +++  +  +  S+  ++ EL  RG K
Sbjct: 762 HKMMDKQYSFDPASFMPVIDELGKRGSK 789



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 184/391 (47%), Gaps = 47/391 (12%)

Query: 163 KPSLKAISTCLNLLIESN---QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           KPSL+++     +LI +    Q+D     L   +QH R   +   F+ L++     G LE
Sbjct: 43  KPSLQSVPAIARILITAKMHPQIDHLHQLLL--SQH-RDFAHPSGFS-LVRTLADLGLLE 98

Query: 220 SAFEVLKEMKKSQMSYPNLIT-YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           +A    + ++      P  I+ Y+ L     K  R    I L+++M    ++ P   T+N
Sbjct: 99  NAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVA-RVKPQTYTFN 157

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           +LI   C  G ++ A+++ + M   GC PN F+   L+ G+C+ G      ++ DEM++ 
Sbjct: 158 LLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSS 217

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
              P+ + Y T+I+  C  G+  EA +L+++M+E G   DIVTFN  +  LC+ G+I EA
Sbjct: 218 GALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEA 277

Query: 399 ------------LG-----------MLEKLWYDGIY---------------LNKASYRIV 420
                       +G           MLE    +G++               L+  SY I 
Sbjct: 278 SRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIW 337

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +    + G+L +A  +L  M  +   P+  + N L+  LCK GM  DA   L  + E G 
Sbjct: 338 MLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGV 397

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELV 511
            P++ +++ L+   CR  K+L A  +L E++
Sbjct: 398 APDTVTYSTLLHGYCRRGKILEANYVLREMI 428



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 3/245 (1%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +L P++ IF+  I ++CK+G L SAF VLKEM+K   +  +L TY++LI GL    +  E
Sbjct: 559 KLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCN-KSLRTYNSLIQGLGSENQIFE 617

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
              L +EM  +  I P+  TYN +I     GGK+  A  +++ M   G +PN++ +  L+
Sbjct: 618 IYGLMDEMKERG-IFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI 676

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
             F K      A+E+F+   +     +++ Y+ + N     G   +A EL +   +R   
Sbjct: 677 GAFFKACDFGAAQELFEIALSLCGHKESL-YSFMFNELLAGGETLKAKELFEAALDRSLA 735

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
                +  ++  LC++GK+++A  +L K+       + AS+  V++   ++G    A E 
Sbjct: 736 LKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEF 795

Query: 437 LRLML 441
              M+
Sbjct: 796 AERMM 800



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 5/235 (2%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN-FLLKPDTIG- 346
           ++D   +++     +  +P+ F   +L+      G L+ A   F  +++ F   P  I  
Sbjct: 64  QIDHLHQLLLSQHRDFAHPSGF---SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISF 120

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y  L  C  +  RVD  + L K+M     K    TFN+++  LC  G +E A  + +K+ 
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMS 180

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G   N+ S  I++   C+ G     I+LL  M   G LP+    N ++  LC  G   
Sbjct: 181 EKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTV 240

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           +A   +  + E+G  P+  ++   +  +C+  ++L A  +  ++ I E   +  P
Sbjct: 241 EAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 210/441 (47%), Gaps = 22/441 (4%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE----------------- 130
           + GFNH   +Y  +   L   + +   +++LR++     +  E                 
Sbjct: 3   RNGFNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPG 62

Query: 131 -GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
            G+F  L     +  + E   + F K+    R  P  ++ +  L+   +  + D  + F 
Sbjct: 63  FGVFDALFSVLIDLGMLEEATQCFSKMKRF-RVFPKTRSCNGLLHKFAKLGKTDGVKRFF 121

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           K        KP    +NI+I    K G +E+A  + +EMK   +  P+ +TY+++IDG  
Sbjct: 122 K-DMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGL-IPDTVTYNSMIDGYG 179

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K GR  + +  FEEM S     PD +TYN LI+ FC+ GK+ +  +    MK +G  PNV
Sbjct: 180 KVGRLDDTVYFFEEMKSM-SCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNV 238

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
            +Y+TL++ FCKE  +Q+A + + +M+     P+   YT+L++  C+ G + +A  L  E
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M E G + ++VT+  ++ GLC   +++EA  +  K+   G+  N ASY  +++   +   
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKN 358

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +++A+ELL  +  RG  P        +  LC     E A + +  + E G K  +  +  
Sbjct: 359 MDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTT 418

Query: 490 LVELICRGRKLLFAFELLDEL 510
           L++   +         LL+E+
Sbjct: 419 LMDAYFKSGNPTEGLHLLEEM 439



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 218/429 (50%), Gaps = 9/429 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  TY +++D   +  + +       +M   +C+     + +L+  F       +
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPK 221

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFN 206
            LE + ++   +  KP++ + ST ++   +    D+ Q  +K+     R+   PN   + 
Sbjct: 222 GLEFYREMKQ-SGLKPNVVSYSTLVDAFCKE---DMMQQAIKFYVDMRRVGHVPNEFTYT 277

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L+  +CK G L  AF +  EM +  + + N++TY+ LIDGLC   R +EA +LF +MV+
Sbjct: 278 SLVDANCKIGNLSDAFRLANEMLEVGVEW-NVVTYTALIDGLCDAERMKEAEKLFGKMVT 336

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              ++P+  +YN LI GF +   +DRA +++  +K  G  P++  Y T + G C   K++
Sbjct: 337 AG-VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIE 395

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            AK V +EM+   +K +T+ YTTL++ + ++G   E L LL+EM+E   +  +VTF +++
Sbjct: 396 AAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLI 455

Query: 387 GGLCREGKIEEALGMLEKLWYD-GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
            GLC+   + +A+    ++  D G+  N A Y  +++  C++ +++ A  L   M   G 
Sbjct: 456 DGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           +P       L+    K G   +A      + E+G K +  ++  LV    +  +L  A  
Sbjct: 516 VPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARS 575

Query: 506 LLDELVIKE 514
            L+E++ +E
Sbjct: 576 FLEEMIGEE 584



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 141/276 (51%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    +  L   L   G   EA + F +M  + ++ P   + N L+  F + GK D  K+
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKM-KRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
             + M   G  P VF Y  +++   KEG ++ A+ +F+EMK   L PDT+ Y ++I+ + 
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + GR+D+ +   +EMK   C+ D++T+N ++   C+ GK+ + L    ++   G+  N  
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           SY  +++  C++  +++AI+    M   G +P+  T   L+   CK G   DA      +
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +E+G +    ++  L++ +C   ++  A +L  ++V
Sbjct: 300 LEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV 335


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 224/441 (50%), Gaps = 19/441 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-------TYETCKFHE 130
           AL++FN ++++ G   N  TY+T+++ L    +      ++R+M       T  TC    
Sbjct: 269 ALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT--- 324

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           G  + L     +   +E    +F  +     E P++   +  ++ L  S  + +A     
Sbjct: 325 GPIIAL----CDMGCYEDAWRLFVDMKNKGCE-PNVYTYTALISGLCVSGILKVAIGLFH 379

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
             ++   + PNT  +N LI    +   ++ AF VL  M ++  S PN++TY+ +I G C 
Sbjct: 380 RMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCS-PNIVTYNEMIKGYCI 437

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G  ++A+ +   M+ +     + +TYN +I G+C  G    A +I++ M++ GC P+ +
Sbjct: 438 LGDPKKAMLVMNNMLQRGHS-ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +YT L+ GFCK  K++ A  +F+EM +  L P+ + YT LI+ +C+  ++D A  LL+ M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           K  GC+ ++ T+N+++ GL ++     A  + + +  +GI+ N  +Y  +++  C+ G  
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+E+   M+ +G LP+  T + L+  L + G  E+A      L   G  P+  ++  +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676

Query: 491 VELICRGRKLLFAFELLDELV 511
           +E      K+  AF  L  ++
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMI 697



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 212/437 (48%), Gaps = 22/437 (5%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q  L I+N V      + N A   TI+ K+     FE+      +M+ +T  +   I  +
Sbjct: 212 QPNLLIYNAVINALCKDGNVADAETIMKKV-----FES------EMSPDTFTYTSMILGH 260

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             KH  + +L     ++F+++     E P+    ST +N L +S +V+ A + ++    H
Sbjct: 261 CRKHDLDSAL-----QVFNQMAKEGCE-PNTVTYSTLINGLCDSGRVNEAFDLIREMILH 314

Query: 196 LRLK-PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
             L   +TC   I+    C  G  E A+ +  +MK      PN+ TY+ LI GLC +G  
Sbjct: 315 GILPTAHTCTGPIIAL--CDMGCYEDAWRLFVDMKNKGCE-PNVYTYTALISGLCVSGIL 371

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           + AI LF  M S+D + P+ +TYN LI+      ++  A  ++  M  NGC+PN+  Y  
Sbjct: 372 KVAIGLFHRM-SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G+C  G  ++A  V + M       + + Y T+I  +C +G    AL +L  M++ G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           CK D  ++  ++ G C+  K+E A G+  ++  DG+  N+ +Y  +++  C+  +L+ A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            LL  M   G  P+  T N L+  L K      A      ++E G  P   ++  +++ +
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 495 CRGRKLLFAFELLDELV 511
           C+      A E+ ++++
Sbjct: 611 CKNGSTSLALEMFNKMI 627



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 136/256 (53%), Gaps = 2/256 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N +IK +C  G   SA  +L  M+      P+  +Y+ LI G CK  +   A  L
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK-PDEWSYTELICGFCKISKMESAFGL 517

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F EMV  D + P+ +TY  LIDG+C+  K+D A  ++E MK +GC PNV  Y  L++G  
Sbjct: 518 FNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+     A+E+   M    + P+ + YT +I+  C+ G    ALE+  +M E+GC  +++
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++  L +EGK+EEA  +  +L   G+  ++ +Y  ++      G++E A   L  M
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 441 LCRGFLPHYATSNELL 456
           +  G  P   T   L+
Sbjct: 697 IKAGCQPTLWTYGVLI 712



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 151/304 (49%), Gaps = 2/304 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ L+ H  + G   +  +    M  S+   PNL+ Y+ +I+ LCK+G   +A E   + 
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRML-SEGVQPNLLIYNAVINALCKDGNVADA-ETIMKK 240

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V + ++ PD  TY  +I G CR   +D A ++   M   GC PN   Y+TL+NG C  G+
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA ++  EM    + P     T  I   C  G  ++A  L  +MK +GC+ ++ T+  
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC  G ++ A+G+  ++  DG++ N  +Y  ++N   +   ++ A  +L LM   G
Sbjct: 361 LISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+  T NE++   C  G  + A + +  +++ G      ++  +++  C       A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 505 ELLD 508
            +LD
Sbjct: 481 RILD 484



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M+S+  +      Y+ L+    R G           M + G  PN+  Y  ++N  C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+G + +A+ +  ++    + PDT  YT++I   CR   +D AL++  +M + GC+ + V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++ GLC  G++ EA  ++ ++   GI     +    +   C  G  E A  L   M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRK 499
             +G  P+  T   L+  LC +G+ +  AI LF  +   G  P + ++  L+ ++   R+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILK-VAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 500 LLFAFELLD 508
           + +AF +L+
Sbjct: 406 IKYAFVVLN 414



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 196/447 (43%), Gaps = 29/447 (6%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           +P+ A+ + N +  Q+G + N  TY TI+          +   +L  M    CK  E  +
Sbjct: 440 DPKKAMLVMNNML-QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             L+  F   S  E    +F+++       P+    +  ++   +  ++D A + L++  
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +    +PN   +N+LI    K+     A E+ K M +  + +PN++TY+ +IDGLCKNG 
Sbjct: 558 RS-GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI-FPNVVTYTAMIDGLCKNGS 615

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              A+E+F +M+ +   LP+ LTY+ LI    + GKV+ A+ +   ++ +G  P+   Y 
Sbjct: 616 TSLALEMFNKMIEQG-CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI---------------------- 351
            ++  +   GK++ A      M     +P    Y  LI                      
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVP 734

Query: 352 NC-FCRAGRVDEALELLK-EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           NC F       +A+ ++  ++ E      +   N ++  L   G+  EA  +L  +   G
Sbjct: 735 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 794

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  ++ +Y  +L    +   ++ A+ + + M  +G   H     EL+  LC+    ++A 
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEAR 854

Query: 470 IALFGLVEMGFKPESDSWALLVELICR 496
           I    ++   + P+    A+L++ + R
Sbjct: 855 ITFENMLMRTWNPDDVVQAVLIDGLLR 881



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 100/219 (45%)

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
           R    ++ +  +G    +F Y+ L+    + G      + +  M +  ++P+ + Y  +I
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+ G V +A  ++K++ E     D  T+  ++ G CR+  ++ AL +  ++  +G  
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y  ++N  C  G + +A +L+R M+  G LP   T    ++ LC  G  EDA   
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +   G +P   ++  L+  +C    L  A  L   +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           + L+  L   GR+ EA EL   M+S+  + PD   YN L+    R   VD A  + + M 
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQG-LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC  ++  Y  L+   C+  + +EA+  F+ M      PD +    LI+   R G  D
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 362 EALELLKEMKER 373
             +E L  M+ R
Sbjct: 887 LCMEFLHIMETR 898



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/149 (17%), Positives = 67/149 (44%)

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           +  L  + + G +  +  ++ +L  L R G     +    ++  +G+  N   Y  V+N 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G +  A  +++ +      P   T   +++  C+    + A      + + G +P 
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVI 512
           + +++ L+  +C   ++  AF+L+ E+++
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMIL 313



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 2/118 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N L+    +   ++ A  V K M  +Q    +L  Y  LI  LC+  R +EA
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS-TQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
              FE M+ +    PD +   VLIDG  R G  D   + +  M+     P+   YT L
Sbjct: 854 RITFENMLMRTWN-PDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 152/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ + +  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++   + DEM    LKPD I YTTLI+  C+ G +D A E  K+M +   + 
Sbjct: 291 GLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++   +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 150/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN + ++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 NELFDEMLVKGLV-PNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +   +++ M   G  P+   YTTL++G CKEG L  A E   +M    ++
Sbjct: 290 YGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN  IF  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLVPNGVIFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GLCK G  ++   L +EM S   + PD +TY  L
Sbjct: 266 AMEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEM-SMKGLKPDKITYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM N  L
Sbjct: 324 IDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 153/308 (49%), Gaps = 25/308 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFD 108

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         K+I+E     G   +++ +  LM+ FCK+G
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGF--------YKEILE----CGYPASLYFFNILMHRFCKDG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 157 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N   +  +++  C+ G ++ A+E+ + ML +
Sbjct: 217 VLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G  +     +  +   G KP+  ++  L++  C+   L  A
Sbjct: 277 SLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTA 336

Query: 504 FELLDELV 511
           FE   +++
Sbjct: 337 FEHRKQMI 344


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 224/446 (50%), Gaps = 11/446 (2%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           L++  K PQ A  ++ T++   G   +  T +T++D L++  +  A   + + M      
Sbjct: 101 LLQTGKIPQ-ASSVYKTMTSH-GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 158

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
            +E ++  L+         +  LEM  ++       P     +  ++ L +S  V+ A+ 
Sbjct: 159 PNEVVYSALIHGLCKARKMDCALEMLAQMKK-AFCTPDTITYNVLIDGLCKSGDVEAARA 217

Query: 188 FLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           F    ++ L    KP+   +NILI   CK G  ++A   L +         ++ TY+ ++
Sbjct: 218 FF---DEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIV 274

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           D L KN +  EA+ L E+ ++ +   P   TYN L++G C+ G+++ A  ++  + +NGC
Sbjct: 275 DWLAKNKKIEEAVALMEK-ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 333

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            P+V  YT+L++G  KE +  EA ++F EM    L  DT+ YT LI    + G++ +A  
Sbjct: 334 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 393

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           + K M   GC  D+VT + ++ GL + G+I  A+ + + +   G+  N+  Y  +++  C
Sbjct: 394 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 453

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPES 484
           +  +++ A+E+L  M      P   T N L+  LCK+G  E AA A F  ++E G KP+ 
Sbjct: 454 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE-AARAFFDEMLEAGCKPDV 512

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
            ++ +L+   C+      A  + D++
Sbjct: 513 YTYNILISGFCKAGNTDAACGVFDDM 538



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 179/349 (51%), Gaps = 36/349 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    +N L+   CK G LE A ++L+++  +  + P+++TY++LIDGL K  R  EA +
Sbjct: 19  PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVTYTSLIDGLGKEKRSFEAYK 77

Query: 260 LFEEM----------------------------------VSKDQILPDALTYNVLIDGFC 285
           LF+EM                                  ++    +PD +T + +IDG  
Sbjct: 78  LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 137

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + G++  A +I + M+  G  PN   Y+ L++G CK  K+  A E+  +MK     PDTI
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL-GMLEK 404
            Y  LI+  C++G V+ A     EM E GCK D+ T+NI++ G C+ G  + A   + ++
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
              +G  ++  +Y  ++++  +  ++E+A+ L+  +   G  P  AT N LL  LCK G 
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            E+A   L  +V+ G  P+  ++  L++ + + ++   A++L  E+ ++
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 366



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 215/462 (46%), Gaps = 48/462 (10%)

Query: 90  GFNHNNATYATILDKLARYKK-FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           G   +  TY +++D L + K+ FEA   + ++M           +  L++         +
Sbjct: 51  GCTPDVVTYTSLIDGLGKEKRSFEAYK-LFKEMALRGLALDTVCYTALIRELLQTGKIPQ 109

Query: 149 VLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              ++  +  H      P +  +ST ++ L ++ ++  A    K S +   L PN  +++
Sbjct: 110 ASSVYKTMTSHGCV---PDVVTLSTMIDGLSKAGRIGAAVRIFK-SMEARGLAPNEVVYS 165

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   CK   ++ A E+L +MKK+    P+ ITY+ LIDGLCK+G    A   F+EM+ 
Sbjct: 166 ALIHGLCKARKMDCALEMLAQMKKA-FCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLE 224

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRA------------------------------KKI 296
                PD  TYN+LI GFC+ G  D A                              KKI
Sbjct: 225 AG-CKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKI 283

Query: 297 ------MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
                 ME +  NGC P +  Y  L+NG CK G+L+EA ++  ++ +    PD + YT+L
Sbjct: 284 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 343

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+   +  R  EA +L KEM  RG   D V +  ++  L + GKI +A  + + +   G 
Sbjct: 344 IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 403

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             +  +   +++   + G +  A+ + + M  RG  P+    + L+  LCKA    D A+
Sbjct: 404 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA-RKMDCAL 462

Query: 471 ALFGLVEMGF-KPESDSWALLVELICRGRKLLFAFELLDELV 511
            +   ++  F  P++ ++ +L++ +C+   +  A    DE++
Sbjct: 463 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 504



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 197/393 (50%), Gaps = 12/393 (3%)

Query: 73  KEPQCALEIFNTVSEQKGF-NHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---F 128
           ++  CALE+   +  +K F   +  TY  ++D L +    EA  A   +M    CK   +
Sbjct: 175 RKMDCALEMLAQM--KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 232

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
              I ++      N       L     I+  T +  +  AI   ++ L ++ +++ A   
Sbjct: 233 TYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAI---VDWLAKNKKIEEAVAL 289

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           ++    +    P    +N L+   CK G LE A ++L+++  +  + P+++TY++LIDGL
Sbjct: 290 MEKITAN-GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVTYTSLIDGL 347

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
            K  R  EA +LF+EM  +   L D + Y  LI    + GK+ +A  + + M ++GC P+
Sbjct: 348 GKEKRSFEAYKLFKEMALRGLAL-DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 406

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           V   +T+++G  K G++  A  +F  M+   L P+ + Y+ LI+  C+A ++D ALE+L 
Sbjct: 407 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           +MK+  C  D +T+NI++ GLC+ G +E A    +++   G   +  +Y I+++  C+ G
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             + A  +   M       +  T   L+  LCK
Sbjct: 527 NTDAACGVFDDMSSSRCSANVVTYGALISGLCK 559



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 137/246 (55%), Gaps = 3/246 (1%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +  EA+ L E+ ++ +   P   TYN L++G C+ G+++ A  ++  + +NGC P+V  Y
Sbjct: 1   KIEEAVALMEK-ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 59

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T+L++G  KE +  EA ++F EM    L  DT+ YT LI    + G++ +A  + K M  
Sbjct: 60  TSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 119

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            GC  D+VT + ++ GL + G+I  A+ + + +   G+  N+  Y  +++  C+  +++ 
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLV 491
           A+E+L  M      P   T N L+  LCK+G  E AA A F  ++E G KP+  ++ +L+
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVE-AARAFFDEMLEAGCKPDVYTYNILI 238

Query: 492 ELICRG 497
              C+ 
Sbjct: 239 SGFCKA 244



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 116/224 (51%), Gaps = 2/224 (0%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K++ A  +ME +  NGC P +  Y  L+NG CK G+L+EA ++  ++ +    PD + YT
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           +LI+   +  R  EA +L KEM  RG   D V +  ++  L + GKI +A  + + +   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   +  +   +++   + G +  A+ + + M  RG  P+    + L+  LCKA    D 
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA-RKMDC 179

Query: 469 AIALFGLVEMGF-KPESDSWALLVELICRGRKLLFAFELLDELV 511
           A+ +   ++  F  P++ ++ +L++ +C+   +  A    DE++
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEML 223



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 47/85 (55%)

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           ++E+A+ L+  +   G  P  AT N LL  LCK G  E+A   L  +V+ G  P+  ++ 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 489 LLVELICRGRKLLFAFELLDELVIK 513
            L++ + + ++   A++L  E+ ++
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALR 85


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 149/250 (59%), Gaps = 2/250 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQ-PDVYTYSVLINGLCKESKMNDA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+  + ++P+ +T+  LIDG C+ G +D A +  + M   G +P++  Y TL+ 
Sbjct: 226 NELFDEMIG-NGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CKEG L++A+++ DEM    LKPD I YTTLI+  C+ G ++ A +  K M +   + 
Sbjct: 285 GLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLCREG+   A  ML ++   G+  +  +Y +++N  C+KG+++   +LL
Sbjct: 345 DDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLL 404

Query: 438 RLMLCRGFLP 447
           + M   G +P
Sbjct: 405 KEMQRDGHVP 414



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 191/351 (54%), Gaps = 7/351 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP-NTCIFNILIKHHCKRGTLES 220
           ++  +   S  +   +ES  +  A    + + +H    P +TC    +++H  K    +S
Sbjct: 62  QRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTC--RKVLEHFMKLKYFKS 119

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            +   KE+   +  YP +L  ++ L+   CK G  R A  +F+E ++K  + P  +++N 
Sbjct: 120 VWGFYKEI--LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDE-ITKWGLRPSVVSFNT 176

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L++G+ R G +D   ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNG 236

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + +TTLI+  C+ G +D A+E  KEM  +G   D++T+N ++ GLC+EG +++A 
Sbjct: 237 LVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQ 296

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +++++   G+  +K +Y  +++ SC++G+LE A +  + M+             L+  L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGL 356

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           C+ G +  A   L  ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 357 CREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEM 407



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 152/294 (51%), Gaps = 9/294 (3%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           + +  + FE + E K +Q S  ++  +S LI    ++G   +A+E F         +P  
Sbjct: 45  KDSASAVFEAILEAKGAQRS--DVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFD 102

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
               VL + F    K+   K +  F K     G   +++ +  LM+ FCKEG+++ A+ V
Sbjct: 103 TCRKVL-EHFM---KLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSV 158

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FDE+  + L+P  + + TL+N + R G +DE   L   M   G + D+ T+++++ GLC+
Sbjct: 159 FDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCK 218

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           E K+ +A  + +++  +G+  N  ++  +++  C+ G ++ A+E  + ML +GF P   T
Sbjct: 219 ESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLIT 278

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            N L+  LCK G  + A   +  +   G KP+  ++  L++  C+   L  AF+
Sbjct: 279 YNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFK 332



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 86/167 (51%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           +  L++ FC+ G +  A  +  E+ + G +  +V+FN ++ G  R G ++E   +   + 
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             GI  +  +Y +++N  C++ ++  A EL   M+  G +P+  T   L+   CK G  +
Sbjct: 199 GSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSID 258

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            A  A   ++  GF P+  ++  L+  +C+   L  A +L+DE+ +K
Sbjct: 259 LAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMK 305


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 161/303 (53%), Gaps = 2/303 (0%)

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   C+ G L+ A  VL+EM    +   +++TY+ LIDG CK G   EA  +  EMV +
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDV-DVVTYTVLIDGYCKRGNMVEAFRVHNEMVGR 456

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
            ++ P+ +TY  L DG C+ G V  A +++  M N G   NV+ Y +L+NG CK G L++
Sbjct: 457 -RVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQ 515

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +  EM+    + D   YTTLI+  C++G  D A  +L+EM ++G K  I T+N+++ 
Sbjct: 516 AMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMN 575

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G C  G++E    +LE +    +  N  +Y  ++   C    ++   E+ + M  +   P
Sbjct: 576 GFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAP 635

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T N L+   CKA   ++A      ++E G +  + S++ L+ L+ + +K   A    
Sbjct: 636 NENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFF 695

Query: 508 DEL 510
           D++
Sbjct: 696 DKM 698



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 163/298 (54%), Gaps = 2/298 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+ N  ++  +I   C +G +  A  VL++M    ++  + + ++T+I G C  G    A
Sbjct: 318 LESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVAL-DAVVFTTVISGFCSKGDLAAA 376

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LFEEM  K  +  D +T+  LI+G CR G++  A ++++ M + G + +V  YT L++
Sbjct: 377 RRLFEEM-QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLID 435

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK G + EA  V +EM    + P+ + YT L +  C+ G V  A ELL EM  +G + 
Sbjct: 436 GYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL 495

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ T+N ++ GLC+ G +E+A+ ++ ++   G   +  +Y  +++  C+ GE ++A  +L
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNML 555

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           + ML +G  P  AT N L+   C +G  E     L  ++E   +P   ++  L++  C
Sbjct: 556 QEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYC 613



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 167/313 (53%), Gaps = 5/313 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N C  NIL+K     G L+ A +   EM     S P+++TY T++ G C  G    A++L
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEMS----SPPDVVTYGTMVHGYCVRGELENAVKL 309

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM +K  +  +A  Y  +I   C  G+V  A +++E M  +G   +   +TT+++GFC
Sbjct: 310 LDEMAAKG-LESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFC 368

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +G L  A+ +F+EM+   L  D + +T LIN  CRAG + EA  +L+EM ++G   D+V
Sbjct: 369 SKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVV 428

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+ +++ G C+ G + EA  +  ++    +  N  +Y  + +  C++G++  A ELL  M
Sbjct: 429 TYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEM 488

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +  T N L+  LCK G  E A   +  +   G + +  ++  L++ +C+  + 
Sbjct: 489 CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEF 548

Query: 501 LFAFELLDELVIK 513
             A  +L E++ K
Sbjct: 549 DRAHNMLQEMLDK 561



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 169/327 (51%), Gaps = 11/327 (3%)

Query: 184 LAQNFLKYSNQH---LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           L+   LK + QH   +   P+   +  ++  +C RG LE+A ++L EM    +   N   
Sbjct: 266 LSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLE-SNATV 324

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+++I  LC  G+  +A+ + E+M      L DA+ +  +I GFC  G +  A+++ E M
Sbjct: 325 YTSVIALLCNKGQVSDALRVLEDMTMHGVAL-DAVVFTTVISGFCSKGDLAAARRLFEEM 383

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           +  G   +   +T L+NG C+ G+L+EA  V  EM +  L  D + YT LI+ +C+ G +
Sbjct: 384 QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM 443

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            EA  +  EM  R    ++VT+  +  GLC++G +  A  +L ++   G+ LN  +Y  +
Sbjct: 444 VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSL 503

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +N  C+ G LE+A+ ++  M   G      T   L+  LCK+G  + A   L  +++ G 
Sbjct: 504 INGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGI 563

Query: 481 KPESDSWALLVELICR------GRKLL 501
           KP   ++ +L+   C       G+KLL
Sbjct: 564 KPSIATYNVLMNGFCMSGRVEGGKKLL 590



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 217/457 (47%), Gaps = 15/457 (3%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++G  +       E + A+++ + ++  KG   N   Y +++  L    +      VL 
Sbjct: 288 VTYGTMVHGYCVRGELENAVKLLDEMA-AKGLESNATVYTSVIALLCNKGQVSDALRVLE 346

Query: 120 QMTYETCKFHEGIFLNLMKHF---SNCSLHERVLEMFHKIHPITREKPSLKAISTCL-NL 175
            MT         +F  ++  F    + +   R+ E   K     R   + +   T L N 
Sbjct: 347 DMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQK-----RGLAADRVTHTALING 401

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L  + ++  A   L+       L  +   + +LI  +CKRG +  AF V  EM   +++ 
Sbjct: 402 LCRAGELKEADRVLQEMVDK-GLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVA- 459

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN++TY+ L DGLCK G  R A EL  EM +K   L +  TYN LI+G C+ G +++A +
Sbjct: 460 PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL-NVYTYNSLINGLCKFGNLEQAMR 518

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           IM  M+  G   +V+ YTTL++  CK G+   A  +  EM +  +KP    Y  L+N FC
Sbjct: 519 IMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFC 578

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
            +GRV+   +LL+ M E+  + ++VT+N ++   C +  ++    + + +    +  N+ 
Sbjct: 579 MSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNEN 638

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC-KAGMAEDAAIALFG 474
           +Y I++   C+   +++A+   + M+ +G L   A+S   L+RL  K     +A +    
Sbjct: 639 TYNILIKGHCKARNMKEALYFHQEMIEKG-LRLTASSYSALIRLLNKKKKFSEARVFFDK 697

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +   G   E D ++  +++      L     L DELV
Sbjct: 698 MRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELV 734


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQ-PDVYTYSVLINGLCKESKMDDA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 226 NELFDEMLDKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C++G L++A+++ DEM    LKPD I YTTLI+  C+ G ++ A E  K M +   + 
Sbjct: 285 GLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  +L ++   G+  +  +Y +++N  C+KG++    +LL
Sbjct: 345 DDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLL 404

Query: 438 RLMLCRGFLPHYAT 451
           + M   G +P   T
Sbjct: 405 KEMQRDGQMPSVVT 418



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F   ++K  + P  +++N L++G+ R G +D 
Sbjct: 131 GYPASLYFFNILMHKFCKDGDIRVAQSVFNA-ITKWGLRPSVVSFNTLMNGYIRLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLCR+G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+LE A E  + M+             L+  LC+ G   DA   L
Sbjct: 310 DKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVL 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 142/259 (54%), Gaps = 2/259 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P++++++TL++G  + G   E   L   M
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLR-PSVVSFNTLMNGYIRLGDLDEGFRLKTAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M + G  PN   +TTL++G CK G+
Sbjct: 198 HASG-VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   CR G + +A +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+   Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAG 463
             P   T   ++   CK G
Sbjct: 377 LKPDTITYTMIINEFCKKG 395



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 151/302 (50%), Gaps = 25/302 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 45  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFD 102

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGF--------YEEILEC----GYPASLYFFNILMHKFCKDG 150

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VF+ +  + L+P  + + TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 151 DIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYS 210

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   T N L+  LC+ G  + A   +  +   G KP+  ++  L++  C+   L  A
Sbjct: 271 SLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETA 330

Query: 504 FE 505
           FE
Sbjct: 331 FE 332



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 33/173 (19%), Positives = 76/173 (43%)

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           + D   ++ LI  +  +G + +A+E  +  +E        T   +L  L +    +   G
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
             E++   G   +   + I+++  C+ G++  A  +   +   G  P   + N L+    
Sbjct: 123 FYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 182

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           + G  ++       +   G +P+  ++++L+  +C+  K+  A EL DE++ K
Sbjct: 183 RLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK 235


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 216/430 (50%), Gaps = 13/430 (3%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF  +   +  +L  L A  +  +A+D VLR+MT   C  +   +  L+K   + +  
Sbjct: 119 KKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRS 178

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----PN 201
           +  LE+   +     +  P + + +T +N   +   +D A     Y   H  L     PN
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA-----YGTYHEMLDRGILPN 233

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              ++ +I   CK   ++ A EVL  M K+ +  PN  TY++++ G C +G+ +EAI   
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV-MPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M S D + PD +TYN L+D  C+ G+   A+K+ + M   G  P +  Y TL+ G+  
Sbjct: 293 KKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G L E   + D M    + P+   ++ LI  + + G+VD+A+ +  +M+++G   D VT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +  ++G LC+ G++E+A+   E++  + +      Y  +++  C   + +KA EL+  ML
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            RG        N ++   CK G   ++      +V +G KP+  +++ L++  C   K+ 
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 502 FAFELLDELV 511
            A +LL  +V
Sbjct: 532 EATKLLASMV 541



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 199/406 (49%), Gaps = 10/406 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY +++D L +  +      +   MT    K     +  L++ ++       +
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT---KGAL 355

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
           +EM   +  + R    P+    S  +    +  +VD  Q  L +S    + L P+T  + 
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD--QAMLVFSKMRQQGLNPDTVTYG 413

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK G +E A    ++M   ++S P  I Y++LI  LC   ++ +A EL  EM+ 
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I  D + +N +ID  C+ G+V  ++K+ + M   G  P++  Y+TL++G+C  GK+ 
Sbjct: 473 RG-ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EA ++   M +  +KPD + Y TLIN +C+  R+++AL L +EM+  G   DI+T+NIIL
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GL +  +   A  +   +   G  L  ++Y I+L+  C+    ++A+ + + +      
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
               T N ++  L K G  ++A      L   G  P+  +++L+ E
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 697



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN C + IL+   C  G L+  F  L  + K      + I ++ ++ GLC + R  +A
Sbjct: 87  VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGF-IVDAIAFTPMLKGLCADKRTSDA 145

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTTL 315
           +++    +++   +P+  +YN+L+ G C   +   A ++++ M ++G  C P+V +YTT+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGF KEG L +A   + EM +  + P+ + Y+++I   C+A  +D+A+E+L  M + G 
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  T+N I+ G C  G+ +EA+G L+K+  DG+  +  +Y  ++++ C+ G   +A +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWALLV 491
           +   M  RG  P   T   LL      G    A + + GL+++    G  P    +++L+
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPNHYVFSILI 381



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 194/388 (50%), Gaps = 9/388 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F++++ ++G      TY T+L   A       +  +L  M       +  +F  L+
Sbjct: 323 ARKMFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL- 196
             ++     ++ + +F K+       P      T + +L +S +V+ A   ++Y  Q + 
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQ-QGLNPDTVTYGTVIGILCKSGRVEDA---MRYFEQMID 437

Query: 197 -RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            RL P   ++N LI   C     + A E++ EM    +   + I ++++ID  CK GR  
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL-DTIFFNSIIDSHCKEGRVI 496

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+ +LF+ MV +  + PD +TY+ LIDG+C  GK+D A K++  M + G  P+   Y TL
Sbjct: 497 ESEKLFDLMV-RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+CK  ++++A  +F EM++  + PD I Y  ++    +  R   A EL   + E G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + ++ T+NIIL GLC+    +EAL M + L    + L   ++ I++    + G  ++A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAG 463
           L   +   G +P   T + +   L + G
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 40/295 (13%)

Query: 257 AIELFEEMV--SKDQILPDALTYNVLIDGFCRGGKVD----------------------- 291
           A+  +  M     D++ P+  TY +L+   C  G++D                       
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTP 131

Query: 292 ---------RAKKIMEF----MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN- 337
                    R    M+     M   GC PNVF+Y  L+ G C + + QEA E+   M + 
Sbjct: 132 MLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDD 191

Query: 338 -FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
                PD + YTT+IN F + G +D+A     EM +RG   ++VT++ I+  LC+   ++
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +A+ +L  +  +G+  N  +Y  +++  C  G+ ++AI  L+ M   G  P   T N L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LCK G   +A      + + G KPE  ++  L++       L+    LLD +V
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG-IFLNL 136
           A+ +F+ +  Q+G N +  TY T++  L +  + E       QM  E  +   G I  N 
Sbjct: 393 AMLVFSKM-RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE--RLSPGNIVYNS 449

Query: 137 MKHFSNC------SLHERVLEMFHKIHPITREKPSLKAI--STCL-NLLIESNQV-DLAQ 186
           + H S C         E +LEM  +   I  +     +I  S C    +IES ++ DL  
Sbjct: 450 LIH-SLCIFDKWDKAKELILEMLDR--GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
                    + +KP+   ++ LI  +C  G ++ A ++L  M    M  P+ +TY+TLI+
Sbjct: 507 --------RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK-PDCVTYNTLIN 557

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G CK  R  +A+ LF EM S   + PD +TYN+++ G  +  +   AK++   +  +G  
Sbjct: 558 GYCKISRMEDALVLFREMESSG-VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
             +  Y  +++G CK     EA  +F  +    L+ +T  +  +I    + GR DEA +L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              +   G   D+ T++++   L  +G +EE   +   +  +G   N      ++    Q
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736

Query: 427 KGELEKA 433
           +G++ +A
Sbjct: 737 RGDITRA 743


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 205/394 (52%), Gaps = 8/394 (2%)

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           TY  C  +  ++  L++ +    + +  LE+F ++  +    PS+   +  L  +++S +
Sbjct: 115 TYRLCNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGE 173

Query: 182 VDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
                +FLK   + L+ K  P+   FNILI   C  G+ E +  ++++M+KS  + P ++
Sbjct: 174 DVSVWSFLK---EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA-PTIV 229

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY+T++   CK GRF+ AIEL + M SK  +  D  TYN+LI   CR  ++ +   ++  
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+    +PN   Y TL+NGF  EGK+  A ++ +EM +F L P+ + +  LI+     G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             EAL++   M+ +G     V++ ++L GLC+  + + A G   ++  +G+ + + +Y  
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G L++A+ LL  M   G  P   T + L+   CK G  + A   +  +  +G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P    ++ L+   CR   L  A  + + ++++
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 203/434 (46%), Gaps = 22/434 (5%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFS 141
           E+ G+     TY T+L    +  +F+A   +L  M       + C +      N++ H  
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY------NMLIH-- 271

Query: 142 NCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-- 197
           +     R+ + +  +  + +    P+    +T +N      +V +A   L   N+ L   
Sbjct: 272 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL---NEMLSFG 328

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   FN LI  H   G  + A ++   M+   ++ P+ ++Y  L+DGLCKN  F  A
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT-PSEVSYGVLLDGLCKNAEFDLA 387

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              +  M  ++ +    +TY  +IDG C+ G +D A  ++  M  +G +P++  Y+ L+N
Sbjct: 388 RGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK G+ + AKE+   +    L P+ I Y+TLI   CR G + EA+ + + M   G   
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  TFN+++  LC+ GK+ EA   +  +  DGI  N  S+  ++N     GE  KA  + 
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P + T   LL  LCK G   +A   L  L  +    ++  +  L+  +C+ 
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626

Query: 498 RKLLFAFELLDELV 511
             L  A  L  E+V
Sbjct: 627 GNLAKAVSLFGEMV 640



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 179/376 (47%), Gaps = 16/376 (4%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-HFSNCSLHERVLEM 152
           N  TY T+++  +   K      +L +M       +   F  L+  H S  +  E  L+M
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE-ALKM 355

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN-TCIFNI---- 207
           F+ +       PS  +    L+ L ++ + DLA+ F      ++R+K N  C+  I    
Sbjct: 356 FYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGF------YMRMKRNGVCVGRITYTG 408

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK G L+ A  +L EM K  +  P+++TYS LI+G CK GRF+ A E+    + +
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGID-PDIVTYSALINGFCKVGRFKTAKEIVCR-IYR 466

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + P+ + Y+ LI   CR G +  A +I E M   G   + F +  L+   CK GK+ E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E    M +  + P+T+ +  LIN +  +G   +A  +  EM + G      T+  +L 
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G + EA   L+ L      ++   Y  +L   C+ G L KA+ L   M+ R  LP
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646

Query: 448 HYATSNELLVRLCKAG 463
              T   L+  LC+ G
Sbjct: 647 DSYTYTSLISGLCRKG 662



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 198/423 (46%), Gaps = 3/423 (0%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   ++ T+  ++  L +  K    +  +R MT +    +   F  L+  + N     +
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              +F ++  +    P+     + L  L +   +  A+ FLK S   +    +T ++N L
Sbjct: 562 AFSVFDEMTKVGHH-PTFFTYGSLLKGLCKGGHLREAEKFLK-SLHAVPAAVDTVMYNTL 619

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +   CK G L  A  +  EM +  +  P+  TY++LI GLC+ G+   AI   +E  ++ 
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSI-LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LP+ + Y   +DG  + G+        E M N G  P++     +++G+ + GK+++ 
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++  EM N    P+   Y  L++ + +   V  +  L + +   G   D +T + ++ G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +C    +E  L +L+     G+ +++ ++ ++++  C  GE+  A +L+++M   G    
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T + ++  L +    +++ + L  + + G  PES  +  L+  +CR   +  AF + +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918

Query: 509 ELV 511
           E++
Sbjct: 919 EMI 921



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 11/290 (3%)

Query: 171  TCLNLLI---ESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
            TC +L++   ESN +++    LK +  + + +   T  FN+LI   C  G +  AF+++K
Sbjct: 791  TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT--FNMLISKCCANGEINWAFDLVK 848

Query: 227  EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
             M    +S     T   ++  L +N RF+E+  +  EM SK  I P++  Y  LI+G CR
Sbjct: 849  VMTSLGISLDK-DTCDAMVSVLNRNHRFQESRMVLHEM-SKQGISPESRKYIGLINGLCR 906

Query: 287  GGKVDRAKKIMEFM-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
             G +  A  + E M  +  C PNV   + ++    K GK  EA  +   M    L P   
Sbjct: 907  VGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 346  GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
             +TTL++  C+ G V EALEL   M   G K D+V++N+++ GLC +G +  A  + E++
Sbjct: 966  SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025

Query: 406  WYDGIYLNKASYR-IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
              DG   N  +Y+ ++     ++     A  +L+ +L RGF+   + S +
Sbjct: 1026 KGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQD 1075



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 2/311 (0%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+    N +I  + + G +E   ++L EM  +Q   PNL TY+ L+ G  K      +  
Sbjct: 717  PDIVTTNAMIDGYSRMGKIEKTNDLLPEMG-NQNGGPNLTTYNILLHGYSKRKDVSTSFL 775

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            L+  ++  + ILPD LT + L+ G C    ++   KI++     G   + + +  L++  
Sbjct: 776  LYRSII-LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            C  G++  A ++   M +  +  D      +++   R  R  E+  +L EM ++G   + 
Sbjct: 835  CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
              +  ++ GLCR G I+ A  + E++    I     +   ++    + G+ ++A  LLR 
Sbjct: 895  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            ML    +P  A+   L+   CK G   +A      +   G K +  S+ +L+  +C    
Sbjct: 955  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014

Query: 500  LLFAFELLDEL 510
            +  AFEL +E+
Sbjct: 1015 MALAFELYEEM 1025



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 8/315 (2%)

Query: 171  TCLNLLIE--SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            T  N+L+   S + D++ +FL Y +  L  + P+    + L+   C+   LE   ++LK 
Sbjct: 755  TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 814

Query: 228  MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
                 +   +  T++ LI   C NG    A +L + M S   I  D  T + ++    R 
Sbjct: 815  FICRGVEV-DRYTFNMLISKCCANGEINWAFDLVKVMTSLG-ISLDKDTCDAMVSVLNRN 872

Query: 288  GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
             +   ++ ++  M   G +P    Y  L+NG C+ G ++ A  V +EM    + P  +  
Sbjct: 873  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 348  TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            + ++    + G+ DEA  LL+ M +      I +F  ++   C+ G + EAL +   +  
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 408  DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR--LCKAGMA 465
             G+ L+  SY +++   C KG++  A EL   M   GFL + AT+ + L+R  L +    
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN-ATTYKALIRGLLARETAF 1051

Query: 466  EDAAIALFGLVEMGF 480
              A I L  L+  GF
Sbjct: 1052 SGADIILKDLLARGF 1066


>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
 gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
          Length = 321

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 157/291 (53%), Gaps = 2/291 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    F IL+   CK   L  AFE+++ M + +  +PN + ++ ++D LCK GR  EA  
Sbjct: 8   PTVVTFGILVDGLCKANRLTDAFELVEVMGE-RGCFPNALVFNGIMDALCKEGRSAEAYG 66

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             E M S   + P  +TYN+LIDGFC+  K+ RA +I++ M   G  PN   Y T ++G 
Sbjct: 67  FIETMRSMG-VSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGL 125

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK GK+ +A  +F  M    ++ D  GYTTLI+  C+AG++ EA  LL EM+  GC    
Sbjct: 126 CKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKP 185

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N IL  LC+  +I EA  + +++   GI  +  ++ +++   C+   ++ A+ LL+ 
Sbjct: 186 GCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQ 245

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           M   G  P     N L+  L +AG   +A   L  ++  G  P S ++AL+
Sbjct: 246 MKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 148/276 (53%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P ++T+  L+DGLCK  R  +A EL E M  +    P+AL +N ++D  C+ G+   A  
Sbjct: 8   PTVVTFGILVDGLCKANRLTDAFELVEVMGERG-CFPNALVFNGIMDALCKEGRSAEAYG 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
            +E M++ G +P +  Y  L++GFCKE KL  A E+  EM     +P+ + Y T ++  C
Sbjct: 67  FIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+VD+AL L + M E+  + D+  +  ++ GLC+ GK+ EA  +L+++   G      
Sbjct: 127 KYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPG 186

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  +L++ C+   + +A +L + M   G LP + T   ++   C+    +DA + L  +
Sbjct: 187 CYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQM 246

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              G  P    +  L++ + R  ++  A+ LL E++
Sbjct: 247 KSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMI 282



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 139/257 (54%), Gaps = 3/257 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    +  ++ L +  +   A  F++ + + + + P    +N+LI   CK   L  A E
Sbjct: 43  PNALVFNGIMDALCKEGRSAEAYGFIE-TMRSMGVSPTIVTYNLLIDGFCKEEKLHRALE 101

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L+EM   +   PN +TY+T + GLCK G+  +A+ LF  M  K +I  D   Y  LIDG
Sbjct: 102 ILQEM-TGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEK-KIRLDVYGYTTLIDG 159

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ GK+  A  +++ M+N+GC P    Y  +++  CK  ++ EA ++F  M    + PD
Sbjct: 160 LCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPD 219

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + +  ++  +CR  R+D+AL LL++MK  G     V +N ++  L R G++ EA  +L+
Sbjct: 220 WLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQ 279

Query: 404 KLWYDGIYLNKASYRIV 420
           ++   G+  N  +Y ++
Sbjct: 280 EMISRGLSPNSRTYALM 296



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 128/240 (53%)

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +P  +T+ +L+DG C+  ++  A +++E M   GC PN   +  +M+  CKEG+  EA  
Sbjct: 7   IPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYG 66

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
             + M++  + P  + Y  LI+ FC+  ++  ALE+L+EM  RG + + VT+N  L GLC
Sbjct: 67  FIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLC 126

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + GK+++AL +   +    I L+   Y  +++  CQ G+L +A  LL  M   G +P   
Sbjct: 127 KYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPG 186

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             N +L  LCK     +A      +   G  P+  ++ ++V   CRG ++  A  LL ++
Sbjct: 187 CYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQM 246



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 104/212 (49%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC P V  +  L++G CK  +L +A E+ + M      P+ + +  +++  C+ GR
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             EA   ++ M+  G    IVT+N+++ G C+E K+  AL +L+++   G   N  +Y  
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
            L+  C+ G+++ A+ L R M  +           L+  LC+AG   +A   L  +   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
             P+   +  ++  +C+G ++  A +L   + 
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMT 212



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 37/187 (19%)

Query: 370 MKERGCKADIVTFNIILGG-----------------------------------LCREGK 394
           M E+GC   +VTF I++ G                                   LC+EG+
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
             EA G +E +   G+     +Y ++++  C++ +L +A+E+L+ M  RG  P++ T N 
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            L  LCK G  +DA      + E   + +   +  L++ +C+  KL  A+ LLDE+  + 
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEM--EN 178

Query: 515 SGTIQVP 521
           SG +  P
Sbjct: 179 SGCVPKP 185


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 252/535 (47%), Gaps = 85/535 (15%)

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAV--- 114
           R I   +  + + C + P  A +IFN + ++     N  T  T+++ L RY    +V   
Sbjct: 139 RVILDTSIGAYVACNR-PHHAAQIFNRM-KRLHLKPNLLTCNTLINALVRYPSKPSVYLS 196

Query: 115 DAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTC 172
            A+   +     K +   F N++ +   C +  ++ E    I  +      P   + +T 
Sbjct: 197 KAIFSDVIKLGVKVNTNTF-NILIY--GCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTI 253

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L++L +  +++ A++ L    ++  L PN   FNIL+  +CK G L+ A +V+  M ++ 
Sbjct: 254 LDVLCKKGKLNEARDLL-LDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN 312

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG--------- 283
           +  P++ TY+ LI GLCK+G+  EA  L +EM +  ++LPD +TYN LI+G         
Sbjct: 313 V-LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENL-KLLPDVVTYNTLINGCFDCSSSLK 370

Query: 284 --------------------------FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
                                     + + GK+D A   +  M+ +G +P+   + TL+N
Sbjct: 371 GFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLIN 430

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLK-----------------------------------P 342
           G+CK G+L EA  + DEM    LK                                    
Sbjct: 431 GYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFV 490

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + Y TLI  + + G+  EA++L  EMKE+     I+T+N ++GGLC  GK ++++  L
Sbjct: 491 DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +L   G+  ++ +Y  ++   C++G++EKA +    M+ + F P   T N LL  LC  
Sbjct: 551 NELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610

Query: 463 GMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           GM  D A+ LF   +  G   ++ ++  ++  +C+  +   AF+LL E+  K+ G
Sbjct: 611 GML-DKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 174/322 (54%), Gaps = 4/322 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KPN   +N+++K + K G +++A   L++M++S  S P+ +T++TLI+G CK GR  EA
Sbjct: 383 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS-PDCVTFNTLINGYCKAGRLSEA 441

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + +EM S+  +  +++T N ++   C   K+D A K++      G   +  +Y TL+ 
Sbjct: 442 FRMMDEM-SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIM 500

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+ K+GK  EA +++DEMK   + P  I Y T+I   C +G+ D++++ L E+ E G   
Sbjct: 501 GYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVP 560

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+N I+ G CREG++E+A     K+       +  +  I+L   C +G L+KA++L 
Sbjct: 561 DETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLF 620

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
              + +G      T N ++  LCK    E+A   L  + E    P+  ++  ++  +   
Sbjct: 621 NTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADA 680

Query: 498 RKLLFAFELLDELVIKESGTIQ 519
            ++  A E +  +V  E G +Q
Sbjct: 681 GRMKEAEEFMSRIV--EQGKLQ 700



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 186/415 (44%), Gaps = 60/415 (14%)

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN 201
           +CS   +  E+  K+      KP+    +  +   ++  ++D A N L+   +     P+
Sbjct: 364 DCSSSLKGFELIDKMEG-KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES-GFSPD 421

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS--------------------------- 234
              FN LI  +CK G L  AF ++ EM +  +                            
Sbjct: 422 CVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLS 481

Query: 235 -------YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
                  + + ++Y TLI G  K+G+  EA++L++EM  K +I+P  +TYN +I G C  
Sbjct: 482 SASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK-EIIPSIITYNTMIGGLCHS 540

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           GK D++   +  +  +G  P+   Y T++ G+C+EG++++A +  ++M     KPD    
Sbjct: 541 GKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTC 600

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             L+   C  G +D+AL+L      +G   D VT+N I+ GLC+E + EEA  +L ++  
Sbjct: 601 NILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEE 660

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL--------------------- 446
             +  +  +Y  +L+     G +++A E +  ++ +G L                     
Sbjct: 661 KKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQE 720

Query: 447 --PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
             P+  T +E +  LC  G  +DA   +    + G      ++  L+E + + RK
Sbjct: 721 SDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 173/391 (44%), Gaps = 66/391 (16%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E KG   N  TY  ++    +  K +     LR+M           F  L+  +      
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAG-- 436

Query: 147 ERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            R+ E F  +  ++R+   + +++  T L+ L    ++D A   L  +++      +   
Sbjct: 437 -RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF-VDEVS 494

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI  + K G    A ++  EMK+ ++  P++ITY+T+I GLC +G+  ++I+   E+
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEMKEKEI-IPSIITYNTMIGGLCHSGKTDQSIDKLNEL 553

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN------------- 311
           + +  ++PD  TYN +I G+CR G+V++A +    M      P++F              
Sbjct: 554 L-ESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGM 612

Query: 312 ----------------------YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
                                 Y T+++G CKE + +EA ++  EM+   L PD   Y  
Sbjct: 613 LDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNA 672

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKAD-----------------------IVTFNIIL 386
           +++    AGR+ EA E +  + E+G   D                        VTF+  +
Sbjct: 673 ILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQI 732

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
             LC +GK ++A+ M+++    GI L+K++Y
Sbjct: 733 NELCTQGKYKDAMHMVQESTQKGITLHKSTY 763


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 215/429 (50%), Gaps = 16/429 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG + N+ T  +++    +  +    + VL +M       ++G F  ++       L  
Sbjct: 389 SKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLC---LKF 445

Query: 148 RVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQ----VDLAQNFLKYSNQHLRLKPN 201
           R +   H I  +     +P+   ++T ++ L ++ +    V+L    L          PN
Sbjct: 446 RFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG-----FVPN 500

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
               N LI   CK G ++   ++L++M +  + + + ITY+TLI G CK G+ +E  EL 
Sbjct: 501 IVTSNALIHGLCKAGNMQETLKLLRDMLERGLVF-DRITYNTLISGCCKEGKVKEGFELK 559

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           EEMV K  I PD  T+N+L+ G C   K+D A ++    K NG  PNV+ Y  +++G+CK
Sbjct: 560 EEMVKKG-IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK 618

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             K++E + + +E+ +  L+ +++ Y +LI  +C  G ++ A  L  +MK RG      T
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCAT 678

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           ++ ++ GLC  G +++A  +L+++  +G+  N   Y  ++    + G++ K   +L+ M 
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMS 738

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
                P+  T   ++   CK G  ++AA  L  + E G  P++ ++      +C+  K+ 
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVE 798

Query: 502 FAFELLDEL 510
            AF++ DE+
Sbjct: 799 EAFKVCDEM 807



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 199/351 (56%), Gaps = 5/351 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAF 222
           PSLK  +  L+ L+++N+  L +++  Y    L  + P+  +F+ +I   CK    + A 
Sbjct: 219 PSLKTCTFLLSSLVKANE--LKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAI 276

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  +M+K  ++ PN++TY+ +I GLCK+GR  EA    E+MV K+++ P  +TY+V I+
Sbjct: 277 GLFSKMEKLGVA-PNVVTYNNIIHGLCKSGRLDEAYRFKEKMV-KEKVSPSLITYSVFIN 334

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G  +  K+D A  +++ M   G  PN   Y TL++G+CK G + EA ++ D+M +  + P
Sbjct: 335 GLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISP 394

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +++   +LI  FC++ ++ +A  +L+EM  RG   +  +F++++  LC + +   AL  +
Sbjct: 395 NSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFI 454

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++    +  N      +++  C+ G+  +A+EL   +L +GF+P+  TSN L+  LCKA
Sbjct: 455 REMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKA 514

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           G  ++    L  ++E G   +  ++  L+   C+  K+   FEL +E+V K
Sbjct: 515 GNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 206/384 (53%), Gaps = 6/384 (1%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           +F  ++  F      +  + +F K+  +    P++   +  ++ L +S ++D A  F K 
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKMEKLGV-APNVVTYNNIIHGLCKSGRLDEAYRF-KE 315

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCK 250
                ++ P+   +++ I    K   ++ A  VLKEM  S++ + PN + Y+TLIDG CK
Sbjct: 316 KMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEM--SELGFVPNEVVYNTLIDGYCK 373

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G   EA+++ ++M+SK  I P+++T N LI GFC+  ++ +A+ ++E M   G   N  
Sbjct: 374 MGNISEALKIRDDMLSKG-ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQG 432

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +++ ++N  C + +   A     EM    L+P+    TTL++  C+AG+  EA+EL   +
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRL 492

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             +G   +IVT N ++ GLC+ G ++E L +L  +   G+  ++ +Y  +++  C++G++
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           ++  EL   M+ +G  P   T N LL  LC A   ++A+       + G+ P   ++ ++
Sbjct: 553 KEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVM 612

Query: 491 VELICRGRKLLFAFELLDELVIKE 514
           ++  C+  K+     LL+ELV K+
Sbjct: 613 IDGYCKANKVEEGENLLNELVSKK 636



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 169/336 (50%), Gaps = 8/336 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF  N  T   ++  L +    +    +LR M      F    +  L+   S C    +
Sbjct: 495 KGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLI---SGCCKEGK 551

Query: 149 VLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           V E F     + ++  +P +   +  L+ L  ++++D A        ++  + PN   + 
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYV-PNVYTYG 610

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           ++I  +CK   +E    +L E+   ++   N + Y++LI   C NG    A  L ++M S
Sbjct: 611 VMIDGYCKANKVEEGENLLNELVSKKLEL-NSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  +L  A TY+ L+ G C  G VD AK +++ M+  G  PNV  YTT++ G+ K G++ 
Sbjct: 670 RGVLLSCA-TYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMN 728

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +   V  EM +  + P+   YT +I+ FC+ G+  EA +LL EM E+G   D VT+N   
Sbjct: 729 KVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFT 788

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            GLC+EGK+EEA  + +++    + L++ +Y  +++
Sbjct: 789 NGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLID 824



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 127/225 (56%), Gaps = 3/225 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++      ++   ++N+V+  +N L       +L+ N+ ++N LI+ +C  G + +AF 
Sbjct: 604 PNVYTYGVMIDGYCKANKVEEGENLLNELVSK-KLELNSVVYNSLIRAYCINGNMNAAFR 662

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  +MK S+    +  TYS+L+ GLC  G   +A  L +EM  K+ +LP+ + Y  +I G
Sbjct: 663 LRDDMK-SRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEM-RKEGLLPNVVCYTTIIGG 720

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           + + G++++   +++ M ++  +PN F YT +++GFCK GK +EA ++ +EM    + PD
Sbjct: 721 YSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPD 780

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            + Y    N  C+ G+V+EA ++  EM       D +T+  ++ G
Sbjct: 781 AVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F  A ++F  +++K  + P   T   L+    +  ++ ++ ++ +F+   G  P+V  ++
Sbjct: 202 FGFAADVFS-LLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFS 260

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T++N FCK  +  +A  +F +M+   + P+ + Y  +I+  C++GR+DEA    ++M + 
Sbjct: 261 TMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE 320

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
                ++T+++ + GL +  KI+EA  +L+++   G   N+  Y  +++  C+ G + +A
Sbjct: 321 KVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEA 380

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           +++   ML +G  P+  T N L+   CK+     A   L  ++  G      S+++++  
Sbjct: 381 LKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINW 440

Query: 494 ICRGRKLLFAFELLDELVIK 513
           +C   + + A   + E++++
Sbjct: 441 LCLKFRFVTALHFIREMLLR 460


>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
          Length = 571

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 187/380 (49%), Gaps = 16/380 (4%)

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
           E  FL+L++ +S        L +F           S ++ +  L  L+  + + LA++ L
Sbjct: 102 EPPFLSLLRAYSRAHQPLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLL 161

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGT--LESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
               +     P T  +N+L+K HC      ++ A  V + + K     P+  +Y+T+IDG
Sbjct: 162 A-DMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPK-----PDACSYNTVIDG 215

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           LC+ GR  EA +LF EM++ +   P  +TY  LI    R    D A K+ + M   G  P
Sbjct: 216 LCRRGRLPEARDLFAEMIA-NGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMP 274

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           NV  Y++L++G CK G+   A E+ D M      P+TI Y+++I+  C+ G + +A+E+L
Sbjct: 275 NVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEIL 334

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI-------V 420
             M+ +G K D   F  ++ GLC  G+  EA   L+++ + GI  N+ ++ +       V
Sbjct: 335 DRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAV 394

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +   C KGE+ +A ++ + M  RG      T + L+  L K    E AA  +  ++    
Sbjct: 395 VTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERC 454

Query: 481 KPESDSWALLVELICRGRKL 500
            PE ++W  +V      +KL
Sbjct: 455 IPERETWDTIVRAYWSKKKL 474



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 141/278 (50%), Gaps = 10/278 (3%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           +Y+ ++  L  +     A  L  +M +     P   TYNVL+   C    V     +  F
Sbjct: 140 SYTAVLAALVAHSHLSLARSLLADMRAAG-FAPTTATYNVLVKAHCSDAAVPIDDAVRVF 198

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
              N   P+  +Y T+++G C+ G+L EA+++F EM      P  + YTTLI+   R   
Sbjct: 199 --RNIPKPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREAC 256

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            D+AL+L  EM  RG   ++VT++ ++ GLC+ G+   A+ +L+++  +    N  +Y  
Sbjct: 257 FDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSS 316

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V++  C++G L +A+E+L  M  +G  P      +L+V LC AG A +A+  L  +   G
Sbjct: 317 VIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAG 376

Query: 480 FKPESDSWAL-------LVELICRGRKLLFAFELLDEL 510
            +P   +W+L       +V  +C   +++ AF++   +
Sbjct: 377 IRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSM 414



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 7/203 (3%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI-GYTTLINCFCRAGRVDEALELLKEM 370
           + +L+  + +  +   A  +F    + L  P +   YT ++        +  A  LL +M
Sbjct: 105 FLSLLRAYSRAHQPLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLLADM 164

Query: 371 KERGCKADIVTFNIILGGLCREG--KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           +  G      T+N+++   C +    I++A+ +   +       +  SY  V++  C++G
Sbjct: 165 RAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPKP----DACSYNTVIDGLCRRG 220

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            L +A +L   M+  G  P   T   L+  L +    +DA      +   G  P   +++
Sbjct: 221 RLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYS 280

Query: 489 LLVELICRGRKLLFAFELLDELV 511
            L++ +C+G +   A ELLD +V
Sbjct: 281 SLIDGLCKGGRAASAVELLDRMV 303


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 241/542 (44%), Gaps = 105/542 (19%)

Query: 18  STSSSSLPWISPLEVIKANTPKADP-PVETSDTCV----DARKRSRFISH-------GAA 65
           S++ SS P  S    I +NT   DP P   S   +       +RS  +SH          
Sbjct: 25  SSNFSSQPHPSSPLSISSNT---DPFPELVSKISIILSSPTWERSSELSHLIPKLKPHHV 81

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           ++L+      +  L  F+ VS    F H+ + + ++L++L R + F   D V R +  ++
Sbjct: 82  VNLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNV-RILMIKS 140

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
           C+ +EG               +RV+++  +I+       +L + ST   LLI+  + D+ 
Sbjct: 141 CR-NEGEV-------------KRVIQVLSEINTTYDFGYTLYSFST---LLIQLGKFDMD 183

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
                                                +V  EM  S +  PNL T++ +I
Sbjct: 184 G---------------------------------LGRDVYIEMLNSGIR-PNLFTFNAMI 209

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
             LC  G+ +EA EL    +      PD  TY  LI G C+ G +D A ++ + M  +GC
Sbjct: 210 KILCNKGKVQEA-ELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGC 268

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
           +PN   Y+ L+NG C EG+L+EA ++ +EM +  ++P    YT  I   C AGR  EA++
Sbjct: 269 DPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVK 328

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           LL +MK+RGC  ++ T+  ++ GL R+GK E A+G+  K+  DG+     +Y  ++N   
Sbjct: 329 LLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLY 388

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG----------- 474
            +G  E A+ +   ML    LP+  T N ++   C  G  + A  A+F            
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT-AIFDQMLKAGPSPNV 447

Query: 475 ---------------------LVEM----GFKPESDSWALLVELICRGRKLLFAFELLDE 509
                                L+EM    G K ++ ++A L+    RG KL  AF L +E
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507

Query: 510 LV 511
           +V
Sbjct: 508 MV 509



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 222/453 (49%), Gaps = 21/453 (4%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           ++ A IS +  + + + A+ +++ +    G      TY+ ++++L    +FE    +   
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLAD-GLVPTAVTYSALINQLYVEGRFETALTIFEW 402

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           M       +   +  ++K F +    ++   +F ++    +  PS   I+   N++I   
Sbjct: 403 MLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM---LKAGPSPNVIT--YNIII--- 454

Query: 181 QVDLAQNFLKYSNQHLR------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
            +   Q ++  + + L       LK +T  +  LI    + G LE AF +  EM +  +S
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN++TY+ +I+G     +  +A+ LF +MV    + P + TYN++I GF +  ++  A+
Sbjct: 515 -PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV-PSSGTYNMMISGFSKTNRISEAE 572

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
                M   G  PNV  YT+ ++G CK G+   A ++F EMK     P+   Y++LI+  
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G+ ++A  LL +    GC+ ++ T+  ++ GLC +G+  EA  ++E +   G+  ++
Sbjct: 633 CQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSE 688

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
             YR +L   C+  E+E A+++   M+  GF P  +    L+  LCKA   + A      
Sbjct: 689 EIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQT 748

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +++  +  +   W +L++ + +  +   + ELL
Sbjct: 749 MLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 159/335 (47%), Gaps = 42/335 (12%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  LI    + G  E A  V  +M    +  P  +TYS LI+ L   GRF  A+ 
Sbjct: 340 PNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL-VPTAVTYSALINQLYVEGRFETALT 398

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +FE M+S D  LP+  TYNV+I GFC  G + +A  I + M   G +PNV  Y  +++ +
Sbjct: 399 IFEWMLSHDS-LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIY 457

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K+G +  A  + + MK   LK DT  Y  LI+ F R G+++ A  L  EM E G   ++
Sbjct: 458 FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN-FS-------------- 424
           VT+N I+ G     K+++AL +  K+   G   +  +Y ++++ FS              
Sbjct: 518 VTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK 577

Query: 425 --------------------CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
                               C+ G    A ++   M  R + P+  T + L+  LC+ G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELIC-RGR 498
           AEDA      L++ G +P  D++  LV  +C +GR
Sbjct: 638 AEDAE----RLLDDGCEPNVDTYTTLVRGLCGKGR 668



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 160/313 (51%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P    + I I   C  G    A ++L +MKK     PN+ TY+ LI GL ++G+F  A
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCG-PNVQTYTALISGLSRDGKFEVA 361

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           I ++ +M++ D ++P A+TY+ LI+     G+ + A  I E+M ++   PN   Y  ++ 
Sbjct: 362 IGVYHKMLA-DGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIK 420

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC  G +Q+A  +FD+M      P+ I Y  +I+ + + G ++ A+ LL+ MK  G K 
Sbjct: 421 GFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKL 480

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+  ++ G  R GK+E A  +  ++   GI  N  +Y  ++N      +++ A+ L 
Sbjct: 481 DTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALF 540

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G +P   T N ++    K     +A      +V+ G  P   ++   ++ +C+ 
Sbjct: 541 WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600

Query: 498 RKLLFAFELLDEL 510
            +   AF++  E+
Sbjct: 601 GRTSLAFKIFHEM 613



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 201/452 (44%), Gaps = 46/452 (10%)

Query: 62  HGAAISLIK-CEKEPQC-ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           H   I ++  C+    C A+++   + +++G   N  TY  ++  L+R  KFE    V  
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKM-KKRGCGPNVQTYTALISGLSRDGKFEVAIGVYH 366

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           +M        +G+                               P+    S  +N L   
Sbjct: 367 KM------LADGLV------------------------------PTAVTYSALINQLYVE 390

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            + + A    ++   H  L PNT  +N++IK  C  G ++ A  +  +M K+  S PN+I
Sbjct: 391 GRFETALTIFEWMLSHDSL-PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS-PNVI 448

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY+ +I    K G    A+ L E M+  + +  D  TY  LI GF RGGK++ A  +   
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLE-MMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M  +G +PNV  Y  ++NG+    K+ +A  +F +M      P +  Y  +I+ F +  R
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           + EA     +M ++G   +++T+   + GLC+ G+   A  +  ++     + N  +Y  
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  CQ+G+ E A  LL      G  P+  T   L+  LC  G   +A   +  + + G
Sbjct: 628 LIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
            +P  + +  L+   C+  ++  A ++ D +V
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMV 715



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 180/370 (48%), Gaps = 13/370 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q A  IF+ +  + G + N  TY  I+    +         +L  M     K     + N
Sbjct: 429 QKATAIFDQML-KAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487

Query: 136 LMKHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           L+  FS     E    +F+++  H I+   P++   +  +N  +   +VD A        
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGIS---PNVVTYNAIINGYLTVAKVDDALALFWKMV 544

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   + P++  +N++I    K   +  A     +M K Q   PN+ITY++ IDGLCKNGR
Sbjct: 545 ESGNV-PSSGTYNMMISGFSKTNRISEAENFCGKMVK-QGLLPNVITYTSFIDGLCKNGR 602

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              A ++F EM  +D   P+  TY+ LIDG C+ G+ + A+++++    +GC PNV  YT
Sbjct: 603 TSLAFKIFHEMKKRD-YFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYT 657

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+ G C +G+  EA ++ + MK   L+P    Y  L+   C+   V+ AL++   M   
Sbjct: 658 TLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTT 717

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G +  +  +  ++  LC+    ++A  M + +       ++  + ++L+   ++GE + +
Sbjct: 718 GFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLS 777

Query: 434 IELLRLMLCR 443
           +ELL +M  R
Sbjct: 778 LELLHVMESR 787



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 10/129 (7%)

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GL R+  IE    ML      GI  N  ++  ++   C KG++++A  ++  +   G 
Sbjct: 182 MDGLGRDVYIE----MLNS----GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGA 233

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAF 504
            P   T   L++  CK G   D A  +F  +V+ G  P S +++ L+  +C   +L  A 
Sbjct: 234 CPDTFTYTSLIIGHCKNGNL-DLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAM 292

Query: 505 ELLDELVIK 513
           ++L+E++ K
Sbjct: 293 DMLEEMIDK 301


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 218/449 (48%), Gaps = 17/449 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           + A  ++  +S + G   N  T   +++ L +  K E V   L Q+  +        +  
Sbjct: 217 ELAWGVYQEIS-RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+  +S+  L E   E+ + + P     P +   +T +N L +  + + A+       + 
Sbjct: 276 LISAYSSKGLMEEAFELMNAM-PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA---EM 331

Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           LR  L P++  +  L+   CK+G +    +V  +M+ S+   P+L+ +S+++    ++G 
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR-SRDVVPDLVCFSSMMSLFTRSGN 390

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A+  F   V +  ++PD + Y +LI G+CR G +  A  +   M   GC  +V  Y 
Sbjct: 391 LDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T+++G CK   L EA ++F+EM    L PD+   T LI+  C+ G +  A+EL ++MKE+
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GIYLNKASYRIVLNFSCQKGE 429
             + D+VT+N +L G  + G I+ A    +++W D     I     SY I++N  C KG 
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTA----KEIWADMVSKEILPTPISYSILVNALCSKGH 565

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           L +A  +   M+ +   P     N ++   C++G A D    L  ++  GF P+  S+  
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625

Query: 490 LVELICRGRKLLFAFELLDELVIKESGTI 518
           L+    R   +  AF L+ ++  ++ G +
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLV 654



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 211/474 (44%), Gaps = 105/474 (22%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++   IS    +   + A E+ N +   KGF+    TY T+++ L ++ K+E    V  
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMP-GKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329

Query: 120 QM----------TY-----ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKP 164
           +M          TY     E CK  +G  +   K FS+    + V              P
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACK--KGDVVETEKVFSDMRSRDVV--------------P 373

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
            L   S+ ++L   S  +D A  +   S +   L P+  I+ ILI+ +C++G +  A  +
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFN-SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432

Query: 225 LKEMKK------------------------------SQMS----YPNLITYSTLIDGLCK 250
             EM +                              ++M+    +P+  T + LIDG CK
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G  + A+ELF++M  K +I  D +TYN L+DGF + G +D AK+I   M +    P   
Sbjct: 493 LGNLQNAMELFQKMKEK-RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEM----------------------------KNFLLK- 341
           +Y+ L+N  C +G L EA  V+DEM                            ++FL K 
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611

Query: 342 ------PDTIGYTTLINCFCRAGRVDEALELLKEMKER--GCKADIVTFNIILGGLCREG 393
                 PD I Y TLI  F R   + +A  L+K+M+E   G   D+ T+N IL G CR+ 
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           +++EA  +L K+   G+  ++++Y  ++N    +  L +A  +   ML RGF P
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 135/273 (49%), Gaps = 3/273 (1%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAKKIME 298
            +  LI    +  + REA E F  + SK   +  DA   N LI    R G V+ A  + +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC--NALIGSLVRIGWVELAWGVYQ 224

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            +  +G   NV+    ++N  CK+GK+++      +++   + PD + Y TLI+ +   G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            ++EA EL+  M  +G    + T+N ++ GLC+ GK E A  +  ++   G+  +  +YR
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +L  +C+KG++ +  ++   M  R  +P     + ++    ++G  + A +    + E 
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G  P++  + +L++  CR   +  A  L +E++
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 10/295 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH- 146
           Q+G   +  TY TIL  L + K     D +  +MT E   F +   L ++    +C L  
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT-ERALFPDSYTLTILID-GHCKLGN 495

Query: 147 -ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            +  +E+F K+    R +  +   +T L+   +   +D A+           + P    +
Sbjct: 496 LQNAMELFQKMKE-KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA-DMVSKEILPTPISY 553

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           +IL+   C +G L  AF V  EM    +  P ++  +++I G C++G   +     E+M+
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIK-PTVMICNSMIKGYCRSGNASDGESFLEKMI 612

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK--NNGCNPNVFNYTTLMNGFCKEG 323
           S +  +PD ++YN LI GF R   + +A  +++ M+    G  P+VF Y ++++GFC++ 
Sbjct: 613 S-EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +++EA+ V  +M    + PD   YT +IN F     + EA  +  EM +RG   D
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 149/250 (59%), Gaps = 2/250 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ-PDVYTYSVLINGLCKESKMNDA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF EM+  + ++P+ +T+  LIDG C+ G +D A +  + M   G +P++  Y TL+ 
Sbjct: 226 NELFGEMIG-NGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A+++ DEM    LKPD I YTTLI+  C+ G ++ AL   K M +   + 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLCREG+  +A  ML ++   G+  +  +Y +++N  C+KG+++   +LL
Sbjct: 345 DDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLL 404

Query: 438 RLMLCRGFLP 447
           + M   G +P
Sbjct: 405 KEMQRDGHVP 414



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 190/351 (54%), Gaps = 7/351 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP-NTCIFNILIKHHCKRGTLES 220
           ++  +   S  +   +ES  +  A    + + +H    P +TC    +++H  K    + 
Sbjct: 62  QRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTC--RKVLEHFMKLKYFKL 119

Query: 221 AFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
            +   KE+   +  YP +L  ++ L+   CK G  R A  +F+E ++K  + P  +++N 
Sbjct: 120 VWGFYKEI--LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDE-ITKWGLRPSVVSFNT 176

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           L++G+ R G +D   ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+F EM    
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNG 236

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + +TTLI+  C+ G +D A+E  KEM  +G   D++T+N ++ GLC++G +++A 
Sbjct: 237 LVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQ 296

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +++++   G+  +K +Y  +++ SC++G+LE A+   + M+             L+  L
Sbjct: 297 DLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGL 356

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           C+ G + DA   L  ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 357 CREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEM 407



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 52/312 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------DQIL-------PDALTYNV 279
            L +Y T+I  LC +    EA  L + +VS+          + IL        D   ++ 
Sbjct: 12  TLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSG 71

Query: 280 LIDGFCRGG-------------------KVDRAKKIME-FMKNN---------------G 304
           LI  +   G                     D  +K++E FMK                 G
Sbjct: 72  LITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECG 131

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCKEG+++ A+ VFDE+  + L+P  + + TL+N + R G +DE  
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+ +A  +  ++  +G+  N  ++  +++  
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGH 251

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E  + ML +GF P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 252 CKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 485 DSWALLVELICR 496
            ++  L++  C+
Sbjct: 312 ITYTTLIDGSCK 323



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 42/301 (13%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           + +  + FE + E K +Q S  ++  +S LI    ++G   +A+E F         +P  
Sbjct: 45  KDSASAVFEAILEAKGAQRS--DVYVFSGLITAYLESGFLHDALECFRLTREHKFWVP-- 100

Query: 275 LTYNVLIDGFCRGGKVDRAKKIME-FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
                           D  +K++E FMK          Y  L+ GF KE  + E      
Sbjct: 101 ---------------FDTCRKVLEHFMK--------LKYFKLVWGFYKE--ILECG---- 131

Query: 334 EMKNFLLKPDTIGY-TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
                   P ++ +   L++ FC+ G +  A  +  E+ + G +  +V+FN ++ G  R 
Sbjct: 132 -------YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRL 184

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G ++E   +   +   G+  +  +Y +++N  C++ ++  A EL   M+  G +P+  T 
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTF 244

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
             L+   CK G  + A      ++  GF P+  ++  L+  +C+   L  A +L+DE+ +
Sbjct: 245 TTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 513 K 513
           K
Sbjct: 305 K 305


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 197/387 (50%), Gaps = 42/387 (10%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E + AL   + V  Q GF  N  +Y T+++ L +  + +AV  +LR++   + K  + + 
Sbjct: 148 EIKKALYFHDQVVAQ-GFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVK-PDVVM 205

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
            N + H                              S C N L+  +  DL      YS 
Sbjct: 206 YNTIIH------------------------------SLCKNKLL-GDACDL------YSE 228

Query: 194 QHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
             ++ + PN   +N L+   C  G L+ AF +L EMK   ++ P++ T++TLID L K G
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNIN-PDVCTFNTLIDALGKEG 287

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           + + A  +   M+ K  I PD +TYN LIDG+    KV  AK +   M  +G  PNV  Y
Sbjct: 288 KMKAAKIVLAVMM-KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           TT+++G CKE  + EA  +F+EMK   + PD + YT+LI+  C+   ++ A+ L K+MKE
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G + D+ ++ I+L  LC+ G++E A    ++L   G +LN  +Y +++N  C+     +
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGE 466

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRL 459
           A++L   M  +G +P   T   ++  L
Sbjct: 467 AMDLKSKMEGKGCMPDAITFKTIICAL 493



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 3/298 (1%)

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           T +N L ++ +       L+    H  +KP+  ++N +I   CK   L  A ++  EM  
Sbjct: 173 TLINGLCKTGETKAVARLLRKLEGH-SVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIV 231

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             +S PN++TY+ L+ G C  G  +EA  L  EM  K+ I PD  T+N LID   + GK+
Sbjct: 232 KGIS-PNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN-INPDVCTFNTLIDALGKEGKM 289

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
             AK ++  M      P+V  Y +L++G+    K++ AK VF  M    + P+   YTT+
Sbjct: 290 KAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+  C+   VDEA+ L +EMK +    DIVT+  ++ GLC+   +E A+ + +K+   GI
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             +  SY I+L+  C+ G LE A E  + +L +G+  +  T N ++  LCKA +  +A
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEA 467



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 200/405 (49%), Gaps = 19/405 (4%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           NN  Y T++   + +KKFE+  A     T + C  +  I +N   H ++ +    VL   
Sbjct: 75  NNKHYPTVI---SLFKKFESNGA-----TPDLCTLN--ILMNCFCHLTHITFAFSVLANI 124

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNILIKHH 212
            K        P+   ++T +  L    ++  A  F  +   Q  +L  N   +  LI   
Sbjct: 125 LK----RGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL--NQVSYRTLINGL 178

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G  ++   +L++++   +  P+++ Y+T+I  LCKN    +A +L+ EM+ K  I P
Sbjct: 179 CKTGETKAVARLLRKLEGHSVK-PDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG-ISP 236

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           + +TYN L+ GFC  G +  A  ++  MK    NP+V  + TL++   KEGK++ AK V 
Sbjct: 237 NVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVL 296

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
             M    +KPD + Y +LI+ +    +V  A  +   M + G   ++ T+  ++ GLC+E
Sbjct: 297 AVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKE 356

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
             ++EA+ + E++ Y  +  +  +Y  +++  C+   LE+AI L + M  +G  P   + 
Sbjct: 357 KMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 416

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             LL  LCK G  E+A      L+  G+     ++ +++  +C+ 
Sbjct: 417 TILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKA 461



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 207/436 (47%), Gaps = 51/436 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G   N  TY T++D L + K  +   ++  +M Y+        + +L+         E
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLE 395

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP---NTCI 204
           R + +  K+      +P + + +  L+ L +  +++ A+ F     Q L +K    N   
Sbjct: 396 RAIALCKKMKE-QGIQPDVYSYTILLDALCKGGRLENAKEFF----QRLLVKGYHLNVQT 450

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N++I   CK      A + LK   + +   P+ IT+ T+I  L +     +A ++  EM
Sbjct: 451 YNVMINGLCKADLFGEAMD-LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREM 509

Query: 265 V----------------------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           +                      +K  I PD +TY  L+DG+    ++  AK +   M  
Sbjct: 510 IARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQ 569

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
            G  PNV  YT +++G CK+  + EA  +F+EMK+  + P+ + YT+LI+  C+   ++ 
Sbjct: 570 MGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLER 629

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A+ LLKEMKE G + D+ ++ I+L GLC+ G++E A  + ++L   G +LN   Y  ++N
Sbjct: 630 AIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMIN 689

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+ G  ++A++L   M  +G +P   T +                I ++ L E   K 
Sbjct: 690 ELCKAGLFDEALDLQXKMEDKGCMPDAVTFD----------------IIIWALFE---KD 730

Query: 483 ESD-SWALLVELICRG 497
           E+D +  +L E+I RG
Sbjct: 731 ENDKAEKILXEMIARG 746



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 153/314 (48%), Gaps = 2/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN    N LIK  C RG ++ A     +   +Q    N ++Y TLI+GLCK G  +    
Sbjct: 131 PNAITLNTLIKGLCFRGEIKKAL-YFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVAR 189

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  ++     + PD + YN +I   C+   +  A  +   M   G +PNV  Y  L+ GF
Sbjct: 190 LLRKL-EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGF 248

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C  G L+EA  + +EMK   + PD   + TLI+   + G++  A  +L  M +   K D+
Sbjct: 249 CIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDV 308

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++ G     K++ A  +   +   G+  N  +Y  +++  C++  +++A+ L   
Sbjct: 309 VTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEE 368

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M  +  +P   T   L+  LCK    E A      + E G +P+  S+ +L++ +C+G +
Sbjct: 369 MKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 428

Query: 500 LLFAFELLDELVIK 513
           L  A E    L++K
Sbjct: 429 LENAKEFFQRLLVK 442



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 95/207 (45%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P  F++  +++             +F + ++    PD      L+NCFC    +  A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L  + +RG   + +T N ++ GLC  G+I++AL   +++   G  LN+ SYR ++N  C+
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            GE +    LLR +      P     N ++  LCK  +  DA      ++  G  P   +
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  LV   C    L  AF LL+E+ +K
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLK 267



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 35/256 (13%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN-------------- 317
           P    +N ++              + +  ++NG  P++     LMN              
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 318 ---------------------GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
                                G C  G++++A    D++     + + + Y TLIN  C+
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G       LL++++    K D+V +N I+  LC+   + +A  +  ++   GI  N  +
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  ++   C  G L++A  LL  M  +   P   T N L+  L K G  + A I L  ++
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 477 EMGFKPESDSWALLVE 492
           +   KP+  ++  L++
Sbjct: 301 KACIKPDVVTYNSLID 316



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 79/182 (43%)

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           FD M      P T  +  +++           + L K+ +  G   D+ T NI++   C 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
              I  A  +L  +   G + N  +   ++   C +GE++KA+     ++ +GF  +  +
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L+  LCK G  +  A  L  L     KP+   +  ++  +C+ + L  A +L  E++
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 512 IK 513
           +K
Sbjct: 231 VK 232


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 188/349 (53%), Gaps = 7/349 (2%)

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           A +  ++ L +S Q+  A+ +L  +   L L PN   ++ LI   CK G +  A   L E
Sbjct: 82  ACTVLIDGLFKSGQIKEAE-YLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHE 140

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M++     PN+ITYS+LI+G  K G   +A ++  +MV K+  +P+  TY +L+DG  + 
Sbjct: 141 MEEKD-CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNA-MPNICTYAILLDGSFKA 198

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G  D A  +   MK  G   NVF     +N   + G+++EA+E+  +M +  LKPD + Y
Sbjct: 199 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 258

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T L++ F ++G+V  AL L +EM  +    DIVTFN+++  L + GK  +   +   +  
Sbjct: 259 TNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMRE 317

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  + A+Y  +LN + +KG    A+EL   M  R  +P+  T N ++  LC+AG  E+
Sbjct: 318 MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMEN 377

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRK---LLFAFELLDELVIK 513
           A   L  +V MG  P S ++ +L+ +  + R+   +L   ELL  + +K
Sbjct: 378 AIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLK 426



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 175/353 (49%), Gaps = 8/353 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG--TLES 220
           KP L   +  ++  ++S +V  A N  +       +  +   FN+LI    K G    ES
Sbjct: 252 KPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSK-NVVFDIVTFNVLINCLFKLGKSDTES 310

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
            +  ++EM  S    P+L TY+T+++G  K G +  A+EL+ EM S+ +++P+A+T N++
Sbjct: 311 IYSAMREMGLS----PDLATYNTMLNGNFKKGNWTSALELWNEMKSR-KLIPNAITCNIM 365

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I+G C  G+++ A  I++ M   G  P    Y  L+N   K  +     +  + + N  L
Sbjct: 366 INGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQL 425

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           K D   Y  LI+  C+ G   +A  +LK+M+ERG  AD  T+N ++ G C    ++ A  
Sbjct: 426 KVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFM 485

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
               +  + +  +  +Y ++L    + G + +A +LL  +  RG +P+  T   L+   C
Sbjct: 486 TYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHC 545

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           K    ++       +V  GF P+  ++ +L+    +  K+  A EL++E+  K
Sbjct: 546 KVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK 598



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 188/416 (45%), Gaps = 10/416 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++++ + +Q G   N       ++ + R  + E  + ++ +M     K     + NLM
Sbjct: 204 ALDLYSKM-KQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLM 262

Query: 138 KHFSNCSLHERVLEMFHKIHP--ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             F         L +  ++    +  +  +   +  CL  L +S+   +       + + 
Sbjct: 263 DGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYS-----AMRE 317

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P+   +N ++  + K+G   SA E+  EMK  ++  PN IT + +I+GLC+ GR  
Sbjct: 318 MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKL-IPNAITCNIMINGLCEAGRME 376

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            AI++ +EMV    + P + TY +L++   +  + D   +  E + N     +   Y  L
Sbjct: 377 NAIDILKEMVLMG-LYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNIL 435

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++  CK G  ++A  V  +M+   +  DT  Y  LI+ +C +  +  A      M     
Sbjct: 436 ISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERV 495

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             DI T+N++LGGL + G I EA  +L ++   G+  N  +Y  ++   C+    ++ + 
Sbjct: 496 SPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLR 555

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +   M+ +GF+P     N L+    K G  + A   +  +   G  P   ++ +L+
Sbjct: 556 IYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILI 611



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 146/279 (52%), Gaps = 1/279 (0%)

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           +P+++T+ +++ GLCK+G+  E   L  EM  K  +  + ++Y +L+D   + GKV  A 
Sbjct: 7   FPDVVTFGSILYGLCKHGKLSEGKLLLREM-GKMGMNLNNVSYTILLDALFKAGKVAEAL 65

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
             +  M   G N +V   T L++G  K G+++EA+ +F  +    L P+ I Y+ LI+  
Sbjct: 66  MTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSR 125

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G ++ A   L EM+E+ C  +++T++ ++ G  ++G + +A  +L K+ +     N 
Sbjct: 126 CKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNI 185

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y I+L+ S + G  + A++L   M   G   +    +  +  + ++G  E+A   +  
Sbjct: 186 CTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAK 245

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +   G KP+  ++  L++   +  K+  A  L  E+  K
Sbjct: 246 MASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSK 284



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 98/193 (50%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M  +G  P+V  + +++ G CK GKL E K +  EM    +  + + YT L++   +AG+
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           V EAL  L  M  RG   D++   +++ GL + G+I+EA  +   L+   +  N  +Y  
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G++  A   L  M  +  +P+  T + L+    K G+  DA   L  +V   
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 480 FKPESDSWALLVE 492
             P   ++A+L++
Sbjct: 181 AMPNICTYAILLD 193



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 49/227 (21%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           +++LK +  ++NILI + CK G    A  VLK+M++  +   +  TY+ LI G C +   
Sbjct: 422 NMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGI-IADTTTYNALIHGYCISSHL 480

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           + A   +  M+S +++ PD  TYN+L+ G  + G +  A  ++  +K  G  PN   Y T
Sbjct: 481 KRAFMTYSTMLS-ERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYET 539

Query: 315 LMNGFCK-----------------------------------EGKLQEAKEVFDEMKNFL 339
           LM G CK                                    GK+++AKE+ +EM+   
Sbjct: 540 LMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKG 599

Query: 340 LKPDTIGYTTLINCFCRAGRVD------------EALELLKEMKERG 374
           + P    Y  LI  +C   ++             EA  L  EM +RG
Sbjct: 600 VSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRG 646



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 17/227 (7%)

Query: 162 EKPSLKAISTCLNLLIESNQVD--LAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTL 218
           E+  + A +T  N LI    +   L + F+ YS     R+ P+   +N+L+    K G +
Sbjct: 456 EERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLI 515

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
             A ++L E+KK  +  PN  TY TL+ G CK    +E + ++ EMV K   +P    YN
Sbjct: 516 HEADDLLSEIKKRGL-VPNACTYETLMCGHCKVRNTKECLRIYCEMVIKG-FIPKPRAYN 573

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL------------Q 326
           +LI  F + GK+ +AK++M  M+  G +P    Y  L+ G+C   K+             
Sbjct: 574 MLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRA 633

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           EAK +F EM +    P       + + F   G+  +A  LLK   +R
Sbjct: 634 EAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKR 680



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 87/174 (50%)

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + + +++   C+ G++ E   LL+EM + G   + V++ I+L  L + GK+ EAL  
Sbjct: 8   PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMT 67

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L  +   G   +  +  ++++   + G++++A  L   +     +P+Y T + L+   CK
Sbjct: 68  LACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCK 127

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
            G    A  AL  + E    P   +++ L+    +   L  AF++L ++V K +
Sbjct: 128 LGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNA 181


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 184/361 (50%), Gaps = 9/361 (2%)

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           M H   P     P+  A ++ ++ L +SN++  A   L+       + P+   F  LI+ 
Sbjct: 1   MLHSGTP----PPNQHAFASLIDALSKSNRLGDAARALELMCDA-GIHPDVVTFTALIRG 55

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CK   +E A+E+ +EM KS    P+   Y  LIDG CK  R   A+EL  EM  + +I 
Sbjct: 56  FCKNRMVERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQ 115

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           PD + YN ++DG CR  +   A K + E M   GC+P V  YT+L+ G CK  K++ A  
Sbjct: 116 PDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMT 175

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +++ M    ++P  + Y+ +I+   +AGRV +A  +++EM+  GC+ ++V +  ++ GLC
Sbjct: 176 IWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLC 235

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP-HY 449
           + G +++A  +   +   G + N+ +Y  +++  C+    E A+ L   +  R + P   
Sbjct: 236 KSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCPLDV 293

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
           A    ++  LC+    +DA      +   G   ++ ++ +L+    R  +   AF +L+E
Sbjct: 294 AMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEE 353

Query: 510 L 510
           L
Sbjct: 354 L 354



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 208/419 (49%), Gaps = 7/419 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N   +A+++D L++  +       L  M           F  L++ F    + ER  E+F
Sbjct: 10  NQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIF 69

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            ++    R +P        ++   +  ++D A   L+      R++P+  I+N ++   C
Sbjct: 70  QEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLC 129

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           +      A++ L E    Q   P ++TY++LI G CK  + + A+ ++  M+ + +I P 
Sbjct: 130 RSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLER-KIQPT 188

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            ++Y+V+IDG  + G+V  A +++  M+  GC  NV  YTTL++G CK G L +A  ++ 
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYR 248

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            MK     P+   Y TLI+ FCR  R + AL L   +++  C  D+  +  ++ GLCRE 
Sbjct: 249 IMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVAMYTAVVSGLCRER 307

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLMLCRGFLPHYATS 452
           ++++A  +  ++   G+  +  +Y ++L+ + + G  E+A  +L  L    G + +  T 
Sbjct: 308 RLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTY 367

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           N ++   C     E   +  + + + G  P+  +++ L++ +    ++  AF+L +E++
Sbjct: 368 NTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEML 422



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 163/339 (48%), Gaps = 19/339 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNL 136
           ALE+   +  ++    +   Y +I+D L R  +F EA   +   M  + C      + +L
Sbjct: 101 ALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSL 160

Query: 137 MKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           ++    C   +  L M      + R+ +P++ + S  ++ L ++ +V  A   ++   + 
Sbjct: 161 IR--GACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVR-EMET 217

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  + N  I+  LI   CK G L+ A+ + + MK+S  ++PN  TY+TLID  C+N R  
Sbjct: 218 LGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSG-AFPNQRTYATLIDTFCRNDRTE 276

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+ LF+ +  +D    D   Y  ++ G CR  ++D A+ +   M+  G + +   Y  L
Sbjct: 277 TALGLFDHI--RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVL 334

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG----YTTLINCFCRAGRVDEALELLKEMK 371
           ++G  + G+ +EA  + +E+ +    P  +     Y T+I   C    ++  + L  EM+
Sbjct: 335 LHGAFRSGRSEEAFRILEELGD---DPGCVANLLTYNTVIAGCC----LESGMVLFYEMR 387

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +RG   D  T++ ++  L   G+I  A  + E++   G+
Sbjct: 388 QRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGL 426



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 8/215 (3%)

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS 144
           + ++ G   N  TYAT++D   R  + E    +   +  + C     ++  ++       
Sbjct: 249 IMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR-DYCPLDVAMYTAVVSGLCRER 307

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
             +    +F ++  +        A +  L+    S + + A   L+          N   
Sbjct: 308 RLDDARALFREMR-LAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLT 366

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N +I   C    LES   +  EM++  ++ P+  TYS LID L  +G  R A +L EEM
Sbjct: 367 YNTVIAGCC----LESGMVLFYEMRQRGIA-PDFATYSALIDRLLGSGEIRRAFDLCEEM 421

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           ++     P  +   V +   C   + D A K++E 
Sbjct: 422 LASGLSPPSGVLGRV-VARLCWSRRGDLAAKLIEM 455


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 169/313 (53%), Gaps = 2/313 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +N LI    K G +E A+    EMK+  +   N++T ST +D  CK G  REA++L
Sbjct: 268 DVVTYNALINCFSKFGWIEKAYSYFGEMKRLGV-MANVVTLSTFVDAFCKEGLVREAMKL 326

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M  +  ++P+  TY  L+DG C+ G++D A  +++ M + G  PNV  YT +++G C
Sbjct: 327 FAQMRVRG-MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC 385

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           KEGK+  A +V   M+   +K + + YTTLI+        + AL+LL EMK +G + D+ 
Sbjct: 386 KEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVS 445

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +  ++ GLC+  K++EA  +L K+   G+  N   Y  +++   + G+  +A+ LL  +
Sbjct: 446 LYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKI 505

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G  P+  T   L+  LCKAG   +A      + E+G  P    +  L++  C+   L
Sbjct: 506 PDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSL 565

Query: 501 LFAFELLDELVIK 513
             A  L++E+V K
Sbjct: 566 SKAVHLMNEMVDK 578



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 195/385 (50%), Gaps = 10/385 (2%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           +F  L+   ++  L +  +    ++  + R  P+ +  +  L  L  + Q  L +     
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQL-RVPPNTRTCNHILLRLARNRQGGLVRRLF-- 191

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +HL   PN   FNI+I   CK+G L  A  +   MK    S P+++TY++LIDG  K 
Sbjct: 192 --EHLP-APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCS-PDVVTYNSLIDGYGKC 247

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G   E +EL    + K     D +TYN LI+ F + G +++A      MK  G   NV  
Sbjct: 248 GELEE-VELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
            +T ++ FCKEG ++EA ++F +M+   + P+   YT+L++  C+AGR+D+A+ LL EM 
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
            +G   ++VT+ +++ GLC+EGK+  A  +L  +   G+  N+  Y  +++        E
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +A++LL  M  +G     +    L+  LCK    ++A   L  + + G +P +  +  ++
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIM 486

Query: 492 ELICRGRKLLFAFELLDELVIKESG 516
           +   +  K   A  LL +  I +SG
Sbjct: 487 DAFFKAGKESEAVALLHK--IPDSG 509



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 172/353 (48%), Gaps = 37/353 (10%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + L +  N    +  +   CK G +  A ++  +M+   M  PN  TY++L+DG CK GR
Sbjct: 296 KRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGM-MPNEFTYTSLVDGTCKAGR 354

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV----------------------- 290
             +AI L +EMV +  ++P+ +TY V++DG C+ GKV                       
Sbjct: 355 LDDAIVLLDEMVHQG-LVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYT 413

Query: 291 ------------DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
                       +RA  ++  MKN G   +V  Y TL+ G CK  KL EAK +  +M + 
Sbjct: 414 TLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDC 473

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            L+P+T+ YTT+++ F +AG+  EA+ LL ++ + G + ++VT+  ++ GLC+ G I EA
Sbjct: 474 GLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEA 533

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           +   +K+   G+  N   Y  +++  C+ G L KA+ L+  M+ +G          L+  
Sbjct: 534 ISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDG 593

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             K G  + A      ++E G + +   +   +   C    +  A  +L E++
Sbjct: 594 HMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 646



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 153/306 (50%), Gaps = 3/306 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++   +  ++ L +  +V +A + L    +   +K N  ++  LI  H      E A +
Sbjct: 372 PNVVTYTVMVDGLCKEGKVAVADDVLSLM-ERAGVKANELLYTTLIHGHFMNKNSERALD 430

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +L EMK   M   ++  Y TLI GLCK  +  EA  L  +M     + P+ + Y  ++D 
Sbjct: 431 LLNEMKNKGMEL-DVSLYGTLIWGLCKVQKLDEAKSLLHKM-DDCGLRPNTVIYTTIMDA 488

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           F + GK   A  ++  + ++G  PNV  Y  L++G CK G + EA   FD+M+   L P+
Sbjct: 489 FFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPN 548

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              YTTLI+ FC+ G + +A+ L+ EM ++G   D V +  ++ G  ++G ++ A  +  
Sbjct: 549 VQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKA 608

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+   G+ L+   Y   ++  C    +++A  +L  M+  G  P     N L+ +  K G
Sbjct: 609 KMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLG 668

Query: 464 MAEDAA 469
             E+A+
Sbjct: 669 NMEEAS 674



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 162/350 (46%), Gaps = 41/350 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-HFSNCSLH 146
            +G   N  TY  ++D L +  K    D VL  M     K +E ++  L+  HF N +  
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKN-S 425

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           ER L++ +++                                    N+ + L  +  ++ 
Sbjct: 426 ERALDLLNEM-----------------------------------KNKGMEL--DVSLYG 448

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI   CK   L+ A  +L +M    +  PN + Y+T++D   K G+  EA+ L  + + 
Sbjct: 449 TLIWGLCKVQKLDEAKSLLHKMDDCGLR-PNTVIYTTIMDAFFKAGKESEAVALLHK-IP 506

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              + P+ +TY  LIDG C+ G +  A    + M+  G +PNV  YTTL++GFCK G L 
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A  + +EM +  +  D + YT+LI+   + G +  A  L  +M E G + D+  +   +
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFI 626

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            G C    ++EA G+L ++   GI  +K +Y  ++    + G +E+A  L
Sbjct: 627 SGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 7/268 (2%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
           K  + AL++ N + + KG   + + Y T++  L + +K +   ++L +M     + +  I
Sbjct: 423 KNSERALDLLNEM-KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVI 481

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV-DLAQNFLKY 191
           +  +M  F         + + HKI P +  +P++      ++ L ++  + +   +F K 
Sbjct: 482 YTTIMDAFFKAGKESEAVALLHKI-PDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM 540

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             + L L PN  ++  LI   CK G+L  A  ++ EM    MS   ++ Y++LIDG  K 
Sbjct: 541 --RELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVV-YTSLIDGHMKQ 597

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G  + A  L  +M+     L D   Y   I GFC    +  A+ ++  M   G  P+   
Sbjct: 598 GDLQGAFALKAKMIETGLQL-DLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTA 656

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           Y  L+  + K G ++EA  + +EM++ L
Sbjct: 657 YNCLIRKYQKLGNMEEASSLQNEMESVL 684



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 43/241 (17%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+VF+  TL++     G L +A      ++   + P+T    T  +   R  R  +   L
Sbjct: 133 PSVFD--TLLSLLADHGLLDDAVRALARVRQLRVPPNT---RTCNHILLRLARNRQG-GL 186

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALG-------------------------- 400
           ++ + E     ++ TFNI++  LC++G++ EA                            
Sbjct: 187 VRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 246

Query: 401 ---------MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
                    ++ ++   G   +  +Y  ++N   + G +EKA      M   G + +  T
Sbjct: 247 CGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +  +   CK G+  + A+ LF  + + G  P   ++  LV+  C+  +L  A  LLDE+
Sbjct: 307 LSTFVDAFCKEGLVRE-AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365

Query: 511 V 511
           V
Sbjct: 366 V 366


>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           rugosa]
          Length = 414

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+G CK  +  +A
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGXCKESKXDDA 214

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ + +  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 215 NELFDEMLVKG-LVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 273

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD I YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 274 GLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRL 333

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 334 DEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 393

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 394 KEMQRDGHVPSVVTYNVLM 412



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRJAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 178

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K  +A E+FDEM    L P+ + +TTLI+
Sbjct: 179 GFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLID 238

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 239 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKP 298

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC  G + DA   L
Sbjct: 299 DKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKML 358

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 359 REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 396



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 146/261 (55%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK    + A
Sbjct: 157 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 214

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN + ++TLIDG CKNGR   A+E++++M+S+  + PD +TYN LI
Sbjct: 215 NELFDEMLVKGL-VPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 272

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    M     +
Sbjct: 273 YGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXR 332

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C  GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 333 LDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 392

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 393 LKEMQRDGHVPSVVTYNVLMN 413



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 113/191 (59%), Gaps = 2/191 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   F  LI  HCK G ++ A E+ K+M    +S P+LITY+TLI GLCK G  ++A
Sbjct: 226 LVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS-PDLITYNTLIYGLCKKGDLKQA 284

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L +EM  K  + PD +TY  LIDG C+ G +D A +  + M       +   YT L++
Sbjct: 285 HHLIDEMSXKG-LKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALIS 343

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C EG+  +A+++  EM +  LKPD   YT +IN FC+ G V +  +LLKEM+  G   
Sbjct: 344 GLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 403

Query: 378 DIVTFNIILGG 388
            +VT+N+++ G
Sbjct: 404 SVVTYNVLMNG 414



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 140/321 (43%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 60

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E +                   G
Sbjct: 61  LITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ G C+E K ++A  + +++   G+  N   +  +++  
Sbjct: 181 RLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGH 240

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDK 300

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 301 ITYTTLIDGCCKEGDLDSAFE 321



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/299 (19%), Positives = 123/299 (41%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E   +Q S  +J  +S LI    ++G  R+AIE +         +P  
Sbjct: 34  KGSASAVFAAIXETXGTQRS--DJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVP-- 89

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E +           Y  L+ GF            ++E
Sbjct: 90  ---------------FDTCRKVLEHLMK-------LKYFKLVWGF------------YEE 115

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G 
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 175

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++ + + A EL   ML +G +P+      
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTT 235

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK G  + A      ++     P+  ++  L+  +C+   L  A  L+DE+  K
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXK 294


>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 451

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 201/429 (46%), Gaps = 74/429 (17%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           LI  + +P  A EIF+  S Q  F HN +TY  ++ K  R K F  +D +LR++  E+ +
Sbjct: 48  LIASQSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDDLLRRLKSESSQ 107

Query: 128 -FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
                +F  L+K +   +L ++ L  F+                    ++++ N      
Sbjct: 108 PITPTLFSYLIKIYGEANLPDKALNTFY--------------------IMLQFN------ 141

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
             +K   +HL       I +IL+ H   R  L  AF++ K+  K  + +P+  +Y+ L+ 
Sbjct: 142 --IKPLTKHLNR-----ILDILVSH---RNYLRPAFDLFKDAHKHGV-FPDTKSYNILMR 190

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
             C NG    A  LF +M  +D ++PD  +Y +L+   CR  +V+ A  + E M N G  
Sbjct: 191 AFCLNGDISIAYTLFNKMFKRD-VVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFV 249

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+ F YTTL+N  C++ KL+EA ++   MK     PD + Y T+I  FCR GR  +A ++
Sbjct: 250 PDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKV 309

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           + +M+  GC  ++V++  ++ GLC  G ++EA   +E+                      
Sbjct: 310 IDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEE---------------------- 347

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
                        ML +GF PH+A  + L+   C  G  E+A   L   +E    P  D+
Sbjct: 348 -------------MLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDT 394

Query: 487 WALLVELIC 495
           W ++V  IC
Sbjct: 395 WMIIVPQIC 403



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L+ A ++F +     + PDT  Y  L+  FC  G +  A  L  +M +R    DI ++ I
Sbjct: 163 LRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRI 222

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR+ ++  A+ + E +   G   +  +Y  +LN  C+K +L +A +LL  M  +G
Sbjct: 223 LMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKG 282

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P     N +++  C+ G A DA   +  +   G  P   S+  LV  +C    L  A 
Sbjct: 283 CNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEAT 342

Query: 505 ELLDELVIK 513
           + ++E++ K
Sbjct: 343 KYVEEMLSK 351



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 2/145 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N +I   C+ G    A +V+ +M+ +    PNL++Y TL++GLC  G   EA +
Sbjct: 285 PDIVHYNTVILGFCREGRAHDACKVIDDMQ-ANGCLPNLVSYRTLVNGLCHLGMLDEATK 343

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             EEM+SK    P     + L+ GFC  G+++ A  ++     +   P+   +  ++   
Sbjct: 344 YVEEMLSKG-FSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQI 402

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+     +   V +E+    +K DT
Sbjct: 403 CEVDDGVKIDGVLEEVLKIEIKGDT 427


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 220/495 (44%), Gaps = 57/495 (11%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE-------- 112
           SH AA+  ++  K    A+  F    EQ GF H+  TY  +++ L   K +         
Sbjct: 87  SHVAAV--LRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEE 144

Query: 113 -------------------------AVDAV--LRQMTYETCKFHEGIFLNLMKHFSNCSL 145
                                    A DAV     M  + CK     FL L+       +
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            E+  E+FH++  +    P     +  +  L+++ +V  A+       +     P+   +
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFG-QMEKCGFPPDAIAY 263

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N +I    K G  + A +VL  M  ++   P  +TY  L++ LCK G    A ELF  M 
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNM-LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
           +     P+++ Y  LI GF + G++  A  + + M   G  P+V  +T +++G CK G  
Sbjct: 323 ASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           ++A + F+EM     KP+ + YTT+I    + GRV  A  ++K M   GC  D VT+  +
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICL 441

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L G C+ G+++EA  +L++L       N   Y  ++N  C  G +EK ++ L       F
Sbjct: 442 LDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDL-------F 494

Query: 446 LPHYATSNEL--------LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
               A +  L        +V LCK G  ++A      +V  G KP++ ++ +L+  +CR 
Sbjct: 495 EQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS 554

Query: 498 R--KLLFAFELLDEL 510
           R  ++  AF LL +L
Sbjct: 555 RENRVERAFALLHDL 569



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 226/490 (46%), Gaps = 43/490 (8%)

Query: 62  HGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
           H A +  +   K  + A E+F  + E+ GF  +   Y T++D LA+    +    VL  M
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
             + C   E  +  L+         ER  E+F ++   +  +P+    ++ ++   +S +
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELF-RVMAASGFRPNSVIYTSLIHGFAKSGR 345

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           +  A +      +    +P+     ++I   CK G  E A +  +EM +     PN++TY
Sbjct: 346 MKEACSLFDEMVE-AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK-PNVVTY 403

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           +T+I GL K GR   A  + + M++     PD++TY  L+DGFC+ G++D A ++++ + 
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHG-CFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462

Query: 302 NNGCNPNVFNYTTLMNGFC------------------------------------KEGKL 325
               +PN+  Y++L+NG C                                    K G+L
Sbjct: 463 KCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRL 522

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA--GRVDEALELLKEMKERGCKADIVTFN 383
            EA  +F  M +   KPD   Y  LIN  CR+   RV+ A  LL ++++ G   D VT+ 
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYT 582

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            +  GLC+ G+++ A+ MLE+    G   +  +Y  +    C +G++++A+ L + M+ +
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P  A    ++  L K    EDA      ++  G KP   ++  LV+ +C    +  A
Sbjct: 643 GGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702

Query: 504 FELLDELVIK 513
           F   + ++ +
Sbjct: 703 FHRFESMLAR 712



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 205/450 (45%), Gaps = 11/450 (2%)

Query: 48  DTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
           D  V+A  R   I+H   I  +      + A + F  +  + G   N  TY TI+  L++
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM-RGGCKPNVVTYTTIIQGLSK 412

Query: 108 YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLK 167
             +      +++ M    C      ++ L+  F      +   ++  ++   +   P+L+
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS-SSPNLQ 471

Query: 168 AISTCLNLLIESNQVD--LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
             S+ +N L +   V+  L   F +       L P  C    +I   CK G L+ A  + 
Sbjct: 472 LYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCS--IIVGLCKTGRLDEACRIF 529

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKN--GRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + M  S+   P+  TY+ LI+GLC++   R   A  L  ++  K   LPDA+TY  L  G
Sbjct: 530 QRMV-SEGCKPDATTYNILINGLCRSRENRVERAFALLHDL-EKVGYLPDAVTYTPLCIG 587

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G+VDRA K++E   + G N +V  YT L  G C +G++  A  +F EM      PD
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y  +IN   +  ++++A +   EM  +G K  + T+  ++  LC  G ++EA    E
Sbjct: 648 AAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707

Query: 404 KLWYDGIYLNKAS-YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +   G  +     Y  +++  C+  +++ A++L   M+ RG +P   TS  L   L ++
Sbjct: 708 SMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRS 767

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           G  E A   L  +   G  P + ++  +++
Sbjct: 768 GKTEKAQELLQEMAAGGSPPHAATFTAILD 797



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 161/328 (49%), Gaps = 3/328 (0%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A +F +++ +    + +   +N L+            + + +EM K+ ++ PN  +++ L
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIA-PNTFSFNIL 160

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNN 303
           I    +  R  +A+  FE M  K +  PD  T+ +L+D  C+ G  ++A ++  E M   
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
              P+   +T ++    K  +++EA+EVF +M+     PD I Y T+I+   +AG   EA
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           L++L  M  + C    VT+ I++  LC+ G +E A  +   +   G   N   Y  +++ 
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             + G +++A  L   M+  G+ P   T   ++  LCK+G  E AA +   ++  G KP 
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
             ++  +++ + +  ++  AF ++  ++
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMI 427



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 7/293 (2%)

Query: 100 TILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF--SNCSLHERVLEMFHKIH 157
           +I+  L +  + +    + ++M  E CK     +  L+     S  +  ER   + H + 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +     ++     C+ L  +  +VD A   L+ ++       +   +  L    C +G 
Sbjct: 571 KVGYLPDAVTYTPLCIGL-CKIGEVDRAVKMLEEASSR-GWNADVVAYTALCTGLCYQGQ 628

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           ++ A  + +EM + Q   P+   Y  +I+GL K  +  +A + F+EM+ K Q  P   TY
Sbjct: 629 VDRAVSLFQEMVR-QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQ-KPTVATY 686

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
             L+   C  G VD A    E M   G    +V  Y  L++GFCK  K+  A ++F++M 
Sbjct: 687 TALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMI 746

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           +    P  +   +L +   R+G+ ++A ELL+EM   G      TF  IL GL
Sbjct: 747 SRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           CI N LIK       LE A +   EM  K Q   P + TY+ L+  LC  G   EA   F
Sbjct: 653 CIINGLIKVK----KLEDACKFFDEMIGKGQK--PTVATYTALVQALCHAGNVDEAFHRF 706

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           E M+++ +++   + Y+ LI GFC+  KVD A K+ E M + G  P      +L +G  +
Sbjct: 707 ESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            GK ++A+E+  EM      P    +T +++   ++   DE+ +LLK ++E
Sbjct: 767 SGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS---DESGKLLKLVQE 814



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 38/212 (17%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G   +VF Y  LMN    E    +   + +EM    + P+T  +  LI  F R  R D+A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           +   + MK + CK D+ TF I++  LC+ G  E                           
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE--------------------------- 206

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR-LCKAGMAEDAAIALFGLVEM-GFK 481
                   KA E+   M+  GF+P     +  +VR L KA   ++A   +FG +E  GF 
Sbjct: 207 --------KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAR-EVFGQMEKCGFP 257

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P++ ++  +++ + +      A ++LD ++ K
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 167/301 (55%), Gaps = 2/301 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + + L+P    +N LI  +C +G LE AF+   +M +  +  P + TY+ LI  L  + +
Sbjct: 288 KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL-MPTVSTYNMLIHALFLDCK 346

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA  + +EM S+  ++PD++TYN+LI+G+CR G V +A  + + M + G  P    YT
Sbjct: 347 MDEADGIIKEM-SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYT 405

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +L+    K G++++A ++F+++    + PD I +  LI+  C  G +D A  +LKEM + 
Sbjct: 406 SLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQM 465

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
               D VTFN ++ G CREGK+E A  ++E++   GI  +  SY  +++   ++G+++ A
Sbjct: 466 KVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDA 525

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             +   ML  GF P   T N L+  LCK    + A   L  ++  G  P  +++  L+E 
Sbjct: 526 FRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585

Query: 494 I 494
           I
Sbjct: 586 I 586



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 187/348 (53%), Gaps = 5/348 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P + A +  L+L ++SN+ + A  ++ Y+    +R+K +   FNI+I   CK G L+ A 
Sbjct: 154 PHVHACNDMLSLFLKSNRTEKA--WVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAK 211

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E +  M+   +  PN++TY+T+I G C  GR   A  +F+ M  +  + PD+ TY   I 
Sbjct: 212 EFIGLMEALGIK-PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG-VKPDSYTYGSFIS 269

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ GK++ A  ++E MK  G  P    Y TL++G+C +G L+ A +  D+M    L P
Sbjct: 270 GMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP 329

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
               Y  LI+      ++DEA  ++KEM E+G   D VT+NI++ G CR G +++A  + 
Sbjct: 330 TVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLH 389

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +++   GI   + +Y  ++    ++G +++A +L   ++ +G  P     N L+   C  
Sbjct: 390 DEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCAN 449

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G  + A   L  + +M   P+  ++  L++  CR  K+  A EL++E+
Sbjct: 450 GNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 196/388 (50%), Gaps = 38/388 (9%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R K S+   +  +N+L +  ++  A+ F+    + L +KPN   +N +I  +C RG +E 
Sbjct: 186 RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLM-EALGIKPNVVTYNTIIHGYCSRGRVEG 244

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  ++ ++ K +   P+  TY + I G+CK G+  EA  + E+M  +  + P A+TYN L
Sbjct: 245 A-RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM-KEIGLRPTAVTYNTL 302

Query: 281 IDGFCRGG-----------------------------------KVDRAKKIMEFMKNNGC 305
           IDG+C  G                                   K+D A  I++ M   G 
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            P+   Y  L+NG+C+ G +++A  + DEM +  ++P  + YT+LI    + GR+ +A +
Sbjct: 363 VPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L +++  +G   D++ FN ++ G C  G ++ A  ML+++    +  ++ ++  ++   C
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRC 482

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           ++G++E A EL+  M  RG  P + + N L+    K G  +DA      ++ +GF P   
Sbjct: 483 REGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLL 542

Query: 486 SWALLVELICRGRKLLFAFELLDELVIK 513
           ++  L++ +C+  +   A +LL E++ K
Sbjct: 543 TYNALIQGLCKNEEGDHAEQLLKEMISK 570



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 191/356 (53%), Gaps = 15/356 (4%)

Query: 163 KPSLKAISTCLNLLIES-----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           KPSL+ +   +N  + S     N++ +A+  L              ++++LI+  C+   
Sbjct: 85  KPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTY--------VLYDLLIRACCELKR 136

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            + AFE   +M K +   P++   + ++    K+ R  +A  L+ EM  + +I    +T+
Sbjct: 137 GDDAFECF-DMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF-RMRIKSSVVTF 194

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N++I+  C+ GK+ +AK+ +  M+  G  PNV  Y T+++G+C  G+++ A+ +FD MK 
Sbjct: 195 NIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC 254

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             +KPD+  Y + I+  C+ G+++EA  +L++MKE G +   VT+N ++ G C +G +E 
Sbjct: 255 RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEM 314

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A    +K+  +G+    ++Y ++++      ++++A  +++ M  +G +P   T N L+ 
Sbjct: 315 AFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILIN 374

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             C+ G  + A      ++  G +P   ++  L+ ++ +  ++  A +L +++V K
Sbjct: 375 GYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRK 430



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 24/375 (6%)

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN-QHLRLKPNTCIFNILIKH- 211
           H  H IT   PSL  IST L  L ++   DLA  F+ +     L +K + C+   +I H 
Sbjct: 30  HLAHKIT---PSL--ISTALTSLHKTP--DLAFQFVTHIGFGDLDIK-SKCLAMAVISHA 81

Query: 212 -------HCKRGTLESAFEVLKEM------KKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
                     + T+ S    ++E+       +  +     + Y  LI   C+  R  +A 
Sbjct: 82  PNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAF 141

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E F+ M  K  ++P     N ++  F +  + ++A  +   M       +V  +  ++N 
Sbjct: 142 ECFDMMKGKG-VIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINV 200

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKEGKL++AKE    M+   +KP+ + Y T+I+ +C  GRV+ A  +   MK RG K D
Sbjct: 201 LCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPD 260

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+   + G+C+EGK+EEA GMLEK+   G+     +Y  +++  C KG LE A +   
Sbjct: 261 SYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRD 320

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G +P  +T N L+  L      ++A   +  + E G  P+S ++ +L+   CR  
Sbjct: 321 KMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCG 380

Query: 499 KLLFAFELLDELVIK 513
            +  AF L DE++ K
Sbjct: 381 NVKKAFTLHDEMISK 395


>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
 gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
          Length = 647

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 187/380 (49%), Gaps = 16/380 (4%)

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
           E  FL+L++ +S        L +F           S ++ +  L  L+  + + LA++ L
Sbjct: 201 EPPFLSLLRAYSRAHQPLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLL 260

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGT--LESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
               +     P T  +N+L+K HC      ++ A  V + + K     P+  +Y+T+IDG
Sbjct: 261 A-DMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPK-----PDACSYNTVIDG 314

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           LC+ GR  EA +LF EM++ +   P  +TY  LI    R    D A K+ + M   G  P
Sbjct: 315 LCRRGRLPEARDLFAEMIA-NGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMP 373

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           NV  Y++L++G CK G+   A E+ D M      P+TI Y+++I+  C+ G + +A+E+L
Sbjct: 374 NVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEIL 433

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI-------V 420
             M+ +G K D   F  ++ GLC  G+  EA   L+++ + GI  N+ ++ +       V
Sbjct: 434 DRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAV 493

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +   C KGE+ +A ++ + M  RG      T + L+  L K    E AA  +  ++    
Sbjct: 494 VTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERC 553

Query: 481 KPESDSWALLVELICRGRKL 500
            PE ++W  +V      +KL
Sbjct: 554 IPERETWDTIVRAYWSKKKL 573



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 141/278 (50%), Gaps = 10/278 (3%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           +Y+ ++  L  +     A  L  +M +     P   TYNVL+   C    V     +  F
Sbjct: 239 SYTAVLAALVAHSHLSLARSLLADMRAAG-FAPTTATYNVLVKAHCSDAAVPIDDAVRVF 297

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
              N   P+  +Y T+++G C+ G+L EA+++F EM      P  + YTTLI+   R   
Sbjct: 298 --RNIPKPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREAC 355

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            D+AL+L  EM  RG   ++VT++ ++ GLC+ G+   A+ +L+++  +    N  +Y  
Sbjct: 356 FDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSS 415

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           V++  C++G L +A+E+L  M  +G  P      +L+V LC AG A +A+  L  +   G
Sbjct: 416 VIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAG 475

Query: 480 FKPESDSWAL-------LVELICRGRKLLFAFELLDEL 510
            +P   +W+L       +V  +C   +++ AF++   +
Sbjct: 476 IRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSM 513



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 7/203 (3%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI-GYTTLINCFCRAGRVDEALELLKEM 370
           + +L+  + +  +   A  +F    + L  P +   YT ++        +  A  LL +M
Sbjct: 204 FLSLLRAYSRAHQPLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLLADM 263

Query: 371 KERGCKADIVTFNIILGGLCREG--KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           +  G      T+N+++   C +    I++A+ +   +       +  SY  V++  C++G
Sbjct: 264 RAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNI----PKPDACSYNTVIDGLCRRG 319

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            L +A +L   M+  G  P   T   L+  L +    +DA      +   G  P   +++
Sbjct: 320 RLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYS 379

Query: 489 LLVELICRGRKLLFAFELLDELV 511
            L++ +C+G +   A ELLD +V
Sbjct: 380 SLIDGLCKGGRAASAVELLDRMV 402


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 212/426 (49%), Gaps = 8/426 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   +  TY+T ++   + + F+A   V  +M    C  +E +  N+M   S     
Sbjct: 235 EGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNE-VTYNVM--ISGLCRS 291

Query: 147 ERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
             V E F     +     S  A +    +N L + +++  A+  L   +    LKPN  +
Sbjct: 292 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCS-GLKPNIVV 350

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  L+    K G    AF++LKEM  + +  PN I Y  LI GLCK G+   A +L +EM
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQ-PNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K  + PD  TYN L+ G  +    D A +++  M+N+G  PNV++Y  ++NG C+ G+
Sbjct: 410 I-KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            +EA  + +EM +  LKP+   Y  LI    + G +  A E L++M +     D+  +N 
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GL   G++EEA     ++   G+  ++ +Y  +++  C+ G LEKA +LLR ML  G
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             P+  T  +LL    K+   E  +  L  ++  G KP++  + +++  + R   +  AF
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648

Query: 505 ELLDEL 510
            +L E+
Sbjct: 649 MVLTEV 654



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 177/336 (52%), Gaps = 5/336 (1%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQV-DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           H      PS   +   ++   ++  V + AQ  L  ++  L L P     N L+K   + 
Sbjct: 164 HRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMAD--LGLAPTRRCCNGLLKDLLRA 221

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
             +E  ++ LK   +     P++ TYST I+  CK   F  A ++FEEM  +D  + + +
Sbjct: 222 DAMELLWK-LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAM-NEV 279

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYNV+I G CR G V+ A    E M + G +P+ F Y  LMNG CK  +L+EAK + DEM
Sbjct: 280 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM 339

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
               LKP+ + Y TL++ F + G+  EA ++LKEM   G + + + ++ ++ GLC+ G++
Sbjct: 340 SCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQL 399

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
             A  +L+++   G+  +  +Y  ++    Q+ + + A ELL  M   G LP+  +   +
Sbjct: 400 GRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIM 459

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +  LC+ G +++A   L  ++  G KP +  +A L+
Sbjct: 460 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 157/311 (50%), Gaps = 2/311 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N++I   C+ G +E AF   +EM    +S P+  TY  L++GLCK  R +EA  L
Sbjct: 277 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLS-PDAFTYGALMNGLCKGSRLKEAKAL 335

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM S   + P+ + Y  L+DGF + GK   A  I++ M + G  PN   Y  L+ G C
Sbjct: 336 LDEM-SCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC 394

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G+L  A ++  EM    L+PDT  Y  L+    +    D A ELL EM+  G   ++ 
Sbjct: 395 KIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVY 454

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           ++ I++ GLC+ G+ +EA  +LE++  +G+  N   Y  ++    ++G +  A E L  M
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM 514

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                 P     N L+  L   G  E+A      + + G  P+  +++ L+   C+   L
Sbjct: 515 TKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNL 574

Query: 501 LFAFELLDELV 511
             A +LL +++
Sbjct: 575 EKADQLLRQML 585



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 209/426 (49%), Gaps = 8/426 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +  TY  +++ L +  + +   A+L +M+    K +  ++  L+  F       + 
Sbjct: 308 GLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMK---EGKT 364

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E F  +  +     +P+       +  L +  Q+  A   LK   + + L+P+T  +N 
Sbjct: 365 AEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIK-VGLRPDTFTYNP 423

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L++ H ++   + AFE+L EM+ S +  PN+ +Y  +I+GLC+NG  +EA  L EEM+S 
Sbjct: 424 LMQGHFQQHDKDGAFELLNEMRNSGI-LPNVYSYGIMINGLCQNGESKEAGNLLEEMIS- 481

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + + P+A  Y  LI G  + G +  A + +E M     +P++F Y +L+ G    G+++E
Sbjct: 482 EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEE 541

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E + +++   L PD   Y+ LI+ +C+ G +++A +LL++M   G K +  T+  +L 
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLE 601

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G  +    E+   +L+ +   G   +   Y IV+    +   +E A  +L  +   G +P
Sbjct: 602 GYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 661

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                + L+  LCK    E A   L  + + G +P    +  L++  CR   +  A  + 
Sbjct: 662 DLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVF 721

Query: 508 DELVIK 513
           D ++ K
Sbjct: 722 DSILAK 727



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 210/424 (49%), Gaps = 13/424 (3%)

Query: 73  KEPQCALEIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           KE + A E F+ + E    G   N   Y  ++  L +  +      +L++M     +   
Sbjct: 360 KEGKTA-EAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDT 418

Query: 131 GIFLNLMK-HFSNCSLHER--VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
             +  LM+ HF     H++    E+ +++   +   P++ +    +N L ++ +   A N
Sbjct: 419 FTYNPLMQGHFQQ---HDKDGAFELLNEMRN-SGILPNVYSYGIMINGLCQNGESKEAGN 474

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            L+       LKPN  ++  LI  H K G +  A E L++M K+ + +P+L  Y++LI G
Sbjct: 475 LLEEMISE-GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV-HPDLFCYNSLIKG 532

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L   GR  EA E + + V K  ++PD  TY+ LI G+C+ G +++A +++  M N+G  P
Sbjct: 533 LSTVGRMEEAEEYYAQ-VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKP 591

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N   YT L+ G+ K    ++   +   M     KPD   Y  +I    R+  ++ A  +L
Sbjct: 592 NADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVL 651

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            E+++ G   D+  ++ ++ GLC+   +E+A+G+L+++  +G+      Y  +++  C+ 
Sbjct: 652 TEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRS 711

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G++ +A  +   +L +G +P+  T   L+   CK G   DA      +++ G  P++  +
Sbjct: 712 GDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVY 771

Query: 488 ALLV 491
            +L 
Sbjct: 772 NVLA 775



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 170/347 (48%), Gaps = 40/347 (11%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   +  TY+ ++    +    E  D +LRQM     K +   + +L++ +   + +
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDY 609

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E+V                    S+ L  ++ S                   KP+  I+ 
Sbjct: 610 EKV--------------------SSILQSMLGSGD-----------------KPDNHIYG 632

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           I+I++  +   +E AF VL E++K+ +  P+L  YS+LI GLCK     +A+ L +EM +
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEKNGL-VPDLHIYSSLISGLCKIADMEKAVGLLDEM-A 690

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K+ + P  + YN LIDGFCR G + RA+ + + +   G  PN   YT L++G CK G + 
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A +++ EM +  + PD   Y  L      A  +++AL L +EM  RG  A++  FN ++
Sbjct: 751 DAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YANVSLFNTLV 809

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
            G C+ GK++E   +L  +    I  N  +   V++   + G+L +A
Sbjct: 810 HGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEA 856



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 200/424 (47%), Gaps = 47/424 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ N +    G   N  +Y  +++ L +  + +    +L +M  E  K +  ++  L+
Sbjct: 437 AFELLNEM-RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495

Query: 138 KHFS---NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
              S   N SL    LE   K        P L   ++ +  L    +++ A+ +  Y+  
Sbjct: 496 IGHSKEGNISLACEALEKMTK----ANVHPDLFCYNSLIKGLSTVGRMEEAEEY--YAQV 549

Query: 195 HLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
             R L P+   ++ LI  +CK G LE A ++L++M  S +  PN  TY+ L++G  K+  
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK-PNADTYTDLLEGYFKSND 608

Query: 254 FREAIELFEEM----------------------------------VSKDQILPDALTYNV 279
           + +   + + M                                  V K+ ++PD   Y+ 
Sbjct: 609 YEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 668

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI G C+   +++A  +++ M   G  P +  Y  L++GFC+ G +  A+ VFD +    
Sbjct: 669 LISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG 728

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P+ + YT LI+  C+ G + +A +L KEM +RG   D   +N++  G      +E+AL
Sbjct: 729 LVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQAL 788

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            + E+++  G Y N + +  +++  C++G+L++  +LL +M+ R  +P+  T  +++   
Sbjct: 789 FLTEEMFNRG-YANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEF 847

Query: 460 CKAG 463
            KAG
Sbjct: 848 GKAG 851



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 148/303 (48%), Gaps = 12/303 (3%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           EK  Q   ++ N+     G   N  TY  +L+   +   +E V ++L+ M     K    
Sbjct: 575 EKADQLLRQMLNS-----GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNH 629

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           I+  ++++ S     E    +  ++       P L   S+ ++ L +   ++ A   L  
Sbjct: 630 IYGIVIRNLSRSENMEVAFMVLTEVEK-NGLVPDLHIYSSLISGLCKIADMEKAVGLLDE 688

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             +   L+P    +N LI   C+ G +  A  V   +    +  PN +TY+ LIDG CKN
Sbjct: 689 MAKE-GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL-VPNCVTYTALIDGNCKN 746

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVF 310
           G   +A +L++EM+ +  I PDA  YNVL  G      +++A  + E M N G  N ++F
Sbjct: 747 GDITDAFDLYKEMLDRG-IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLF 805

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           N  TL++GFCK GKLQE +++   M +  + P+      +++ F +AG++ EA  +  E+
Sbjct: 806 N--TLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863

Query: 371 KER 373
           +++
Sbjct: 864 QQK 866



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P     +VL+D + + G V  A +++  M + G  P         NG  K+    +A E+
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPT----RRCCNGLLKDLLRADAMEL 226

Query: 332 FDEMKNFL----LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
             ++K F+    + PD   Y+T I   C+A   D A ++ +EM+ R C  + VT+N+++ 
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMIS 286

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLCR G +EEA G  E++   G+  +  +Y  ++N  C+   L++A  LL  M C G  P
Sbjct: 287 GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKP 346

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +      L+    K G   +A   L  ++  G +P    +  L+  +C+  +L  A +LL
Sbjct: 347 NIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 406

Query: 508 DELV 511
            E++
Sbjct: 407 KEMI 410


>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           velutina]
          Length = 406

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 153/259 (59%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 148 LRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 206

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 207 DELFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 265

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ D+M    LKPD I YTTLI+  C+ G +  A E  K + +   + 
Sbjct: 266 GLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRL 325

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 326 DDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLL 385

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 386 KEMQRDGHVPSVVTYNVLM 404



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P A++YN L++G+ R G +D 
Sbjct: 112 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSAVSYNTLMNGYIRLGVLDE 170

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 171 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLID 230

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++ +   G+  
Sbjct: 231 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKP 290

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G L  A E  + ++             L+  LC+ G + DA   L
Sbjct: 291 DKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKML 350

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G  P++ ++ +++   C+   +    +LL E+
Sbjct: 351 REMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEM 388



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 140/259 (54%), Gaps = 2/259 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P+ ++Y+TL++G  + G   E   L   M
Sbjct: 120 FNILMHRFCKDGDIRVAQSVFDAITKWGLR-PSAVSYNTLMNGYIRLGVLDEGFRLKSAM 178

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           ++   + PD  TY+VLI+G C+  K+D A ++ + M   G  PN   +TTL++G CK G+
Sbjct: 179 LASG-VQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 237

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ +M  +G K D +T+  
Sbjct: 238 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTT 297

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +  A    ++L  + I L+   Y  +++  CQ+G    A ++LR ML  G
Sbjct: 298 LIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 357

Query: 445 FLPHYATSNELLVRLCKAG 463
             P   T   ++   CK G
Sbjct: 358 LNPDTGTYTMIINEFCKKG 376



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS  + +T +N  I    +D  + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 149 RPSAVSYNTLMNGYIRLGVLD--EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 206

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 207 DELFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 264

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG L  A E    +    ++
Sbjct: 265 YGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIR 324

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G   D  T+ +I+   C++G + +   +
Sbjct: 325 LDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKL 384

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 385 LKEMQRDGHVPSVVTYNVLMN 405



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 184 QPDVYTYSVLINGLCKESKMDDADELF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 240

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GLCK G  ++A +L ++M S+  + PD +TY  L
Sbjct: 241 AMEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM-SRKGLKPDKITYTTL 298

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +  A +  + +       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 299 IDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGL 358

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            PDT  YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 359 NPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 153/302 (50%), Gaps = 25/302 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 26  KGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFD 83

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 84  TCRKVLEYLMKLKYFKLVWGF--------YEEILE----CGYPASLYFFNILMHRFCKDG 131

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 132 DIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYS 191

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 192 VLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 251

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G  + A   +  +   G KP+  ++  L++  C+   L+ A
Sbjct: 252 SLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSA 311

Query: 504 FE 505
           FE
Sbjct: 312 FE 313



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 79/279 (28%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN- 306
           LC +  F EA  L + +VS                   R GK   +      ++  G   
Sbjct: 4   LCTHQMFSEAKSLLQVVVS-------------------RKGKGSASAVFAAILETKGTQR 44

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFD-EMKNFLLKP-DTIGYTTLINCFCRAGRVDEAL 364
            +++ ++ L+  + + G L++A E +    K+ L  P DT          CR  +V E L
Sbjct: 45  SDIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDT----------CR--KVLEYL 92

Query: 365 ELLK----------EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
             LK          E+ E G  A +  FNI++   C++G I  A  + + +   G+  + 
Sbjct: 93  MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSA 152

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            SY  ++N   + G L++   L   ML  G                              
Sbjct: 153 VSYNTLMNGYIRLGVLDEGFRLKSAMLASGV----------------------------- 183

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                 +P+  ++++L+  +C+  K+  A EL DE+++K
Sbjct: 184 ------QPDVYTYSVLINGLCKESKMDDADELFDEMLVK 216


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 185/361 (51%), Gaps = 9/361 (2%)

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           M H   P     P+  A ++ ++ L +S ++  A   L+   +   + P+   F ++I+ 
Sbjct: 85  MLHSGTP----PPNQHAFASLIDALSKSTRLADAARALELM-RDAGIHPDVVTFTVMIRG 139

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CK   +E A+E+ +EM KS    P+   Y  LIDG CK  R   A+EL  EM  + +I 
Sbjct: 140 FCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQ 199

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           PD + YN ++DG CR  +   A K + E M   GC+P V  YT+L+ G CK  K++ A  
Sbjct: 200 PDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVR 259

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +++ M    ++P  + Y+ +I+   +AGRV +A  +++EM+  GC+ ++V +  ++ GLC
Sbjct: 260 IWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLC 319

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP-HY 449
           + G +++A  +   +   G + N+ +Y  +++  C+    E A+ L   +  R + P   
Sbjct: 320 KSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCPLDV 377

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
           A    ++  LC+    +DA      +   G   ++ ++ +L+    R  +   AF +L+E
Sbjct: 378 AMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEE 437

Query: 510 L 510
           L
Sbjct: 438 L 438



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 212/435 (48%), Gaps = 7/435 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL I  T+        N   +A+++D L++  +       L  M           F  ++
Sbjct: 78  ALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMI 137

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           + F    + ER  E+F ++    R +P        ++   +  ++D A   L+      R
Sbjct: 138 RGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERR 197

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+  I+N ++   C+      A++ L E    Q   P ++TY++LI G CK  + + A
Sbjct: 198 IQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLA 257

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + ++  M+ + +I P  ++Y+V+IDG  + G+V  A +++  M+  GC  NV  YTTL++
Sbjct: 258 VRIWNAMLER-KIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLID 316

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G L +A  ++  MK     P+   Y TLI+ FCR  R + AL L   +++  C  
Sbjct: 317 GLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPL 375

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+  +  ++ GLCRE ++++A  +  ++   G+  +  +Y ++L+ + +    E+A  +L
Sbjct: 376 DVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRIL 435

Query: 438 -RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             L    G + +  T N ++   C     E   +  + + + G  P+  +++ L++ +  
Sbjct: 436 EELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLG 491

Query: 497 GRKLLFAFELLDELV 511
             ++  AF+L +E++
Sbjct: 492 SGEIGRAFDLCEEML 506



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 168/337 (49%), Gaps = 8/337 (2%)

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
           L +  L + + HL   P+     +L  H  + G   +A   L+E   +   +P  ++ S 
Sbjct: 8   LHRRSLYHRSLHLPPSPDAAHAQLLALH--ESGDANAAARFLREKTAAGSIFPGFLS-SV 64

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           +ID  CK+G  R A+ +   M+      P+   +  LID   +  ++  A + +E M++ 
Sbjct: 65  VIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDA 124

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDE 362
           G +P+V  +T ++ GFCK   ++ A E+F EM K+   +PD   Y  LI+ +C+  R+D 
Sbjct: 125 GIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDR 184

Query: 363 ALELLKEMK-ERGCKADIVTFNIILGGLCREGKIEEALGML-EKLWYDGIYLNKASYRIV 420
           ALELL+EM+ ER  + D+V +N I+ GLCR  +  EA   L E +   G      +Y  +
Sbjct: 185 ALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSL 244

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +  +C+  +++ A+ +   ML R   P   + + ++  L KAG   DA   +  +  +G 
Sbjct: 245 IRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGC 304

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
           +     +  L++ +C+   L  A+ L    ++K SG 
Sbjct: 305 ELNVVIYTTLIDGLCKSGFLDDAYALYR--IMKRSGA 339



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 164/339 (48%), Gaps = 19/339 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNL 136
           ALE+   +  ++    +   Y +I+D L R  +F EA   +   M  + C      + +L
Sbjct: 185 ALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSL 244

Query: 137 MKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           ++        +  + +++ +  + R+ +P++ + S  ++ L ++ +V  A   ++   + 
Sbjct: 245 IRGACKAKKMKLAVRIWNAM--LERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVR-EMET 301

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  + N  I+  LI   CK G L+ A+ + + MK+S  ++PN  TY+TLID  C+N R  
Sbjct: 302 LGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSG-AFPNQRTYATLIDTFCRNDRTE 360

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+ LF+ +  +D    D   Y  ++ G CR  ++D A+ +   M+  G + +   Y  L
Sbjct: 361 TALGLFDHI--RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVL 418

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG----YTTLINCFCRAGRVDEALELLKEMK 371
           ++G  +  + +EA  + +E+ +    P  +     Y T+I   C    ++  + L  EM+
Sbjct: 419 LHGAFRSERPEEAFRILEELGD---DPGCVANLLTYNTVIAGCC----LESGMVLFYEMR 471

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           +RG   D  T++ ++  L   G+I  A  + E++   G+
Sbjct: 472 QRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGL 510


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 168/318 (52%), Gaps = 1/318 (0%)

Query: 196  LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            + L PN   ++ +I   CKRG+++ AFE+L+EM K+    PN+ T+++LI GLCK G   
Sbjct: 895  MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWK-PNVYTHTSLIHGLCKKGWTE 953

Query: 256  EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
             A  LF +++  D   P+  TY  +I G+C+  K+ RA+ + E MK  G  PN   YTTL
Sbjct: 954  RAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTL 1013

Query: 316  MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
            ++G CK G   +A E+ + M N    P+T  Y ++++  C+ GR +EA +LL    +   
Sbjct: 1014 IDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQI 1073

Query: 376  KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
            +AD VT+ I++   C+   + +AL  L K++  G   +   Y  ++   C++  ++ + +
Sbjct: 1074 EADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEK 1133

Query: 436  LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            L   ++  G  P   T   ++   C+      A      + + G  P+S S+  L+  +C
Sbjct: 1134 LFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC 1193

Query: 496  RGRKLLFAFELLDELVIK 513
            +  +L  A +L D ++ K
Sbjct: 1194 KESRLDEARQLYDTMIDK 1211



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 203/434 (46%), Gaps = 6/434 (1%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            A  +F+ +S  +G   ++ TY  I+    R       D  + +M              ++
Sbjct: 815  AGNVFDEMS-ARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLII 873

Query: 138  KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
              F   SL  R +  FHK+  +    P+L   S+ ++ L +   V  A   L+   ++  
Sbjct: 874  TAFCEKSLVNRAVWFFHKVTKMGL-SPNLINYSSMISGLCKRGSVKQAFELLEEMVKN-G 931

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             KPN      LI   CK+G  E AF +  ++ +S    PN+ TY+ +I G CK  +   A
Sbjct: 932  WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA 991

Query: 258  IELFEEMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
              LFE M  K+Q ++P+  TY  LIDG C+ G   +A ++ME M N G  PN   Y +++
Sbjct: 992  EMLFERM--KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 1049

Query: 317  NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            +G CK G+ +EA ++ +      ++ D + YT LI+  C+   +++AL  L +M + G +
Sbjct: 1050 DGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQ 1109

Query: 377  ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             DI  +  ++   CR+  ++++  + +++   G+   K +Y  ++   C++ ++  A++ 
Sbjct: 1110 PDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKF 1169

Query: 437  LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             + M   G  P   +   L+  LCK    ++A      +++ G  P   +   L    C+
Sbjct: 1170 FQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCK 1229

Query: 497  GRKLLFAFELLDEL 510
                  A  +L+ L
Sbjct: 1230 TEDFASAMVILERL 1243



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 42/335 (12%)

Query: 71   CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
            C++E     E+     +++G   N  TY T++D   +   F     ++  M+      +E
Sbjct: 983  CKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMS------NE 1036

Query: 131  GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
            G F N       C+ +  V  +  +     R + + K ++T     IE++ V        
Sbjct: 1037 GFFPN------TCTYNSIVDGLCKR----GRAEEAFKLLNTGFQNQIEADGV-------- 1078

Query: 191  YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
                          + ILI   CKR  +  A   L +M K     P++  Y+TLI   C+
Sbjct: 1079 -------------TYTILISEQCKRADMNQALVFLNKMFKVGFQ-PDIHLYTTLIAAFCR 1124

Query: 251  NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
                +++ +LF+E++ K  + P   TY  +I G+CR  KV  A K  + M ++GC P+  
Sbjct: 1125 QNMMKDSEKLFDEVI-KLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSI 1183

Query: 311  NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            +Y  L++G CKE +L EA++++D M +  L P  +   TL   +C+      A+ +L+ +
Sbjct: 1184 SYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 1243

Query: 371  KERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
             +   K  I T + ++  LC E K+  A     KL
Sbjct: 1244 NK---KLWIRTVHTLIRKLCCEKKVALAALFFHKL 1275



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 89/193 (46%)

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           F + GKL+EA ++  +M+N  L   T     +I        V+ A  +  EM  RG   D
Sbjct: 771 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+  I+ G CR G + EA   + ++   G  ++ A+  +++   C+K  + +A+    
Sbjct: 831 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P+    + ++  LCK G  + A   L  +V+ G+KP   +   L+  +C+  
Sbjct: 891 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950

Query: 499 KLLFAFELLDELV 511
               AF L  +L+
Sbjct: 951 WTERAFRLFLKLI 963



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 80/162 (49%)

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           ++  F   G++ EA++++ +M+ +G        N I+        +E A  + +++   G
Sbjct: 767 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +Y +  +Y+ ++   C+ G + +A   +  M+ RGF+   AT   ++   C+  +   A 
Sbjct: 827 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                + +MG  P   +++ ++  +C+   +  AFELL+E+V
Sbjct: 887 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV 928


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 221/456 (48%), Gaps = 26/456 (5%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT--YET 125
           L++C+ +   AL  F+ V    G   +   Y  ++  LA  K+F+     L ++    + 
Sbjct: 98  LLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKD 157

Query: 126 CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA 185
           C F+E +F  L+    +C+    + +M  K +   RE   +K   T    ++E   V   
Sbjct: 158 CSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAY--VREG-MIKEGFTTFRKIVEVGCV--- 211

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
                         P+    N L+    K   ++  ++V KEM +  + +PN  T++ L 
Sbjct: 212 --------------PSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGI-HPNSYTFNILT 256

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
              C++G   +  +  E M  ++   PD +TYN LI  +CR G++D A  +   M     
Sbjct: 257 HVFCQDGDVDKVNDFLERM-EEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNV 315

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            P++ +YT LMNG CKEGK++EA ++F  M +  L PD + + TLI  +C+ G++ E+  
Sbjct: 316 LPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRS 375

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           LL EM   G   D VT  +++ G  +E +I  AL ++ +L   G+ ++   Y  ++   C
Sbjct: 376 LLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSIC 435

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           ++G    A  LL+ +  RG++P     N+L+  LCK+    DA +    +     KP + 
Sbjct: 436 EEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAI 495

Query: 486 SWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           ++  L+  +CR  + + A  L++E++  +SG +  P
Sbjct: 496 TYKALICCLCRTSRSMEAESLMEEML--QSGMLPDP 529



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 4/204 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIE 259
           +T I++ L+   C+ G   +A  +L+ +  SQ  Y P +  Y+ LI+ LCK+    +A+ 
Sbjct: 423 STDIYDYLMVSICEEGRPFAAKSLLQRI--SQRGYVPGVEIYNKLIESLCKSDSIADALL 480

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  EM  ++ I P A+TY  LI   CR  +   A+ +ME M  +G  P+      LM+ +
Sbjct: 481 VKSEMGHRN-IKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVY 539

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKE  + +A+ +           D+  Y TL+  +C        +EL   M + G   +I
Sbjct: 540 CKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNI 599

Query: 380 VTFNIILGGLCREGKIEEALGMLE 403
            TF  ++ GL +   +E+   +LE
Sbjct: 600 QTFRQMIHGLWKAMAVEKDKLLLE 623


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 18/386 (4%)

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+K F +CS     L  F K+  +    P+L   +T L+ L   ++V  A +       H
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFH-PTLVTFNTLLHGLCVEDRVSEALDLF-----H 74

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              KPN   F  L+   C+ G +  A  +L  M +  +  PN ITY T++DG+CK G   
Sbjct: 75  QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQ-PNQITYGTIVDGMCKMGDTV 133

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+ L  +M     I PD + Y+ +IDG  + G+   A+ +   M++ G  P++  Y+ +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGFC  GK  EA+ +  EM    + PD + ++ LIN   + G ++ A +LL+EM   G 
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLW-----------YDGIYLNKASYRIVLNFS 424
             ++VT N +L GLC  GK+++AL M + +            ++G+  +  +Y I+++  
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
             +G+  +A EL   M  RG +P   T + ++  LCK    ++A      +    F P  
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
            ++  L+   C+   +    EL  E+
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEM 399



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 182/365 (49%), Gaps = 22/365 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFSN 142
           + G   N  TY TI+D + +     +   +LR+M            +  I   L K   +
Sbjct: 109 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRH 168

Query: 143 CSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
                  +EM  K        P +   S  +N    S +   AQ  L+      ++ P+ 
Sbjct: 169 TDAQNLFIEMQDK-----GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR-KISPDV 222

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             F+ LI    K G L SA ++L+EM  S +  PN++T +TL+DGLC +G+ ++A+E+F+
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVC-PNVVTCNTLLDGLCDSGKLKDALEMFK 281

Query: 263 EMVSK----------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
            M             + + PD  TYN+LI G    GK   A+++ E M + G  P+   Y
Sbjct: 282 AMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTY 341

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           ++++NG CK+ +L EA ++FD M +    P+ + + TLI  +C+AG VD+ LEL  EM  
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGR 401

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           RG  A+ +T+  ++ G  + G I  +L + +++   G+Y +  + R +L     K EL+K
Sbjct: 402 RGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKK 461

Query: 433 AIELL 437
           A+ +L
Sbjct: 462 ALAML 466



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 195/393 (49%), Gaps = 19/393 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ + +      N  T+ T+++ L R  +     A+L +M  +  + ++  +  ++
Sbjct: 69  ALDLFHQMCKP-----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                       L +  K+  ++  KP +   S  ++ L +  +   AQN      Q   
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLF-IEMQDKG 182

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   ++ +I   C  G    A  +L+EM   ++S P+++T+S LI+ L K G    A
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS-PDVVTFSGLINALVKEGDLNSA 241

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-----------NGCN 306
            +L +EM+S   + P+ +T N L+DG C  GK+  A ++ + M+            NG  
Sbjct: 242 QDLLQEMISSG-VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+V  Y  L++G   EGK  EA+E+++EM +  + PDT+ Y+++IN  C+  R+DEA ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M  +    +IVTFN ++ G C+ G +++ L +  ++   GI  N  +Y  ++    +
Sbjct: 361 FDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRK 420

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            G +  ++++ + M+  G  P   T   +L  L
Sbjct: 421 VGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 220/455 (48%), Gaps = 26/455 (5%)

Query: 70  KCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKF 128
            C K P  AL  F  ++ + GF+    T+ T+L  L    +  EA+D     + ++ CK 
Sbjct: 27  SCSKLP-FALSTFGKLT-KLGFHPTLVTFNTLLHGLCVEDRVSEALD-----LFHQMCKP 79

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQ 186
           +   F  LM          RV+E    +  +  +  +P+     T ++ + +      A 
Sbjct: 80  NVVTFTTLMNGLCR---EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
           N L+   +   +KP+  I++ +I    K G    A  +  EM+   + +P+++TYS +I+
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI-FPDIVTYSCMIN 195

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G C +G++ EA  L +EM+ + +I PD +T++ LI+   + G ++ A+ +++ M ++G  
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVR-KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL-----------KPDTIGYTTLINCFC 355
           PNV    TL++G C  GKL++A E+F  M+  ++           +PD   Y  LI+   
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
             G+  EA EL +EM  RG   D VT++ ++ GLC++ +++EA  M + +       N  
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  ++   C+ G ++  +EL   M  RG + +  T   L+    K G    +      +
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  G  P++ +   ++  +    +L  A  +L+EL
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 40/275 (14%)

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
           QI  D  ++N+LI  FC   K+  A      +   G +P +  + TL++G C E ++ EA
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++F +M     KP+ + +TTL+N  CR GRV EA+ LL  M E G + + +T+  I+ G
Sbjct: 70  LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 389 LCREGKIEEALGMLEK--------------------LWYD----------------GIYL 412
           +C+ G    AL +L K                    LW D                GI+ 
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y  ++N  C  G+  +A  LL+ ML R   P   T + L+  L K G    A   L
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             ++  G  P   +   L++ +C   KL  A E+ 
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMF 280



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 141/300 (47%), Gaps = 23/300 (7%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFS 141
           + KG   +  TY+ +++      K+     +L++M     + +   F  G+   L+K   
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTF-SGLINALVKEGD 237

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR---- 197
             S  + + EM       +   P++   +T L+ L +S ++  A    K   + +     
Sbjct: 238 LNSAQDLLQEMIS-----SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDA 292

Query: 198 ------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                 ++P+   +NILI      G    A E+ +EM    +  P+ +TYS++I+GLCK 
Sbjct: 293 THAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI-VPDTVTYSSMINGLCKQ 351

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R  EA ++F+ M SK    P+ +T+N LI G+C+ G VD   ++   M   G   N   
Sbjct: 352 SRLDEATQMFDSMGSK-SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y TL+ GF K G +  + ++F EM +  + PDTI    ++        + +AL +L+E++
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 18/386 (4%)

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+K F +CS     L  F K+  +    P+L   +T L+ L   ++V  A +       H
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFH-PTLVTFNTLLHGLCVEDRVSEALDLF-----H 74

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              KPN   F  L+   C+ G +  A  +L  M +  +  PN ITY T++DG+CK G   
Sbjct: 75  QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQ-PNQITYGTIVDGMCKMGDTV 133

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+ L  +M     I PD + Y+ +IDG  + G+   A+ +   M++ G  P++  Y+ +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGFC  GK  EA+ +  EM    + PD + ++ LIN   + G ++ A +LL+EM   G 
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLW-----------YDGIYLNKASYRIVLNFS 424
             ++VT N +L GLC  GK+++AL M + +            ++G+  +  +Y I+++  
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
             +G+  +A EL   M  RG +P   T + ++  LCK    ++A      +    F P  
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
            ++  L+   C+   +    EL  E+
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEM 399



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 182/365 (49%), Gaps = 22/365 (6%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFSN 142
           + G   N  TY TI+D + +     +   +LR+M            +  I   L K   +
Sbjct: 109 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRH 168

Query: 143 CSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
                  +EM  K        P +   S  +N    S +   AQ  L+      ++ P+ 
Sbjct: 169 TDAQNLFIEMQDK-----GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR-KISPDV 222

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             F+ LI    K G L SA ++L+EM  S +  PN++T +TL+DGLC +G+ ++A+E+F+
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVC-PNVVTCNTLLDGLCDSGKLKDALEMFK 281

Query: 263 EMVSK----------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
            M             + + PD  TYN+LI G    GK   A+++ E M + G  P+   Y
Sbjct: 282 AMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTY 341

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           ++++NG CK+ +L EA ++FD M +    P+ + + TLI  +C+AG VD+ LEL  EM  
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGR 401

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           RG  A+ +T+  ++ G  + G I  +L + +++   G+Y +  + R +L     K EL++
Sbjct: 402 RGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 461

Query: 433 AIELL 437
           A+ +L
Sbjct: 462 ALAML 466



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 195/393 (49%), Gaps = 19/393 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ + +      N  T+ T+++ L R  +     A+L +M  +  + ++  +  ++
Sbjct: 69  ALDLFHQMCKP-----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                       L +  K+  ++  KP +   S  ++ L +  +   AQN      Q   
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLF-IEMQDKG 182

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   ++ +I   C  G    A  +L+EM   ++S P+++T+S LI+ L K G    A
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS-PDVVTFSGLINALVKEGDLNSA 241

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-----------NGCN 306
            +L +EM+S   + P+ +T N L+DG C  GK+  A ++ + M+            NG  
Sbjct: 242 QDLLQEMISSG-VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+V  Y  L++G   EGK  EA+E+++EM +  + PDT+ Y+++IN  C+  R+DEA ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M  +    +IVTFN ++ G C+ G +++ L +  ++   GI  N  +Y  ++    +
Sbjct: 361 FDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRK 420

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            G +  ++++ + M+  G  P   T   +L  L
Sbjct: 421 VGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 220/455 (48%), Gaps = 26/455 (5%)

Query: 70  KCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKF 128
            C K P  AL  F  ++ + GF+    T+ T+L  L    +  EA+D     + ++ CK 
Sbjct: 27  SCSKLP-FALSTFGKLT-KLGFHPTLVTFNTLLHGLCVEDRVSEALD-----LFHQMCKP 79

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQ 186
           +   F  LM          RV+E    +  +  +  +P+     T ++ + +      A 
Sbjct: 80  NVVTFTTLMNGLCR---EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
           N L+   +   +KP+  I++ +I    K G    A  +  EM+   + +P+++TYS +I+
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI-FPDIVTYSCMIN 195

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G C +G++ EA  L +EM+ + +I PD +T++ LI+   + G ++ A+ +++ M ++G  
Sbjct: 196 GFCSSGKWSEAQRLLQEMLVR-KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL-----------KPDTIGYTTLINCFC 355
           PNV    TL++G C  GKL++A E+F  M+  ++           +PD   Y  LI+   
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
             G+  EA EL +EM  RG   D VT++ ++ GLC++ +++EA  M + +       N  
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++  ++   C+ G ++  +EL   M  RG + +  T   L+    K G    +      +
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +  G  P++ +   ++  +    +L  A  +L+EL
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 40/275 (14%)

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
           QI  D  ++N+LI  FC   K+  A      +   G +P +  + TL++G C E ++ EA
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++F +M     KP+ + +TTL+N  CR GRV EA+ LL  M E G + + +T+  I+ G
Sbjct: 70  LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 389 LCREGKIEEALGMLEK--------------------LWYD----------------GIYL 412
           +C+ G    AL +L K                    LW D                GI+ 
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y  ++N  C  G+  +A  LL+ ML R   P   T + L+  L K G    A   L
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
             ++  G  P   +   L++ +C   KL  A E+ 
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMF 280



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 23/300 (7%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFS 141
           + KG   +  TY+ +++      K+     +L++M     + +   F  G+   L+K   
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTF-SGLINALVKEGD 237

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR---- 197
             S  + + EM       +   P++   +T L+ L +S ++  A    K   + +     
Sbjct: 238 LNSAQDLLQEMIS-----SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDA 292

Query: 198 ------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                 ++P+   +NILI      G    A E+ +EM    +  P+ +TYS++I+GLCK 
Sbjct: 293 THAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI-VPDTVTYSSMINGLCKQ 351

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R  EA ++F+ M SK    P+ +T+N LI G+C+ G VD   ++   M   G   N   
Sbjct: 352 SRLDEATQMFDSMGSK-SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y TL+ GF K G +  + ++F EM +  + PDTI    ++        +  AL +L+E++
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 188/349 (53%), Gaps = 7/349 (2%)

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           A +  ++ L +S Q+  A+ +L  +   L L PN   ++ LI   CK G +  A   L E
Sbjct: 96  ACTVLIDGLFKSGQIKEAE-YLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHE 154

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M++     PN+ITYS+LI+G  K G   +A ++  +MV K+  +P+  TY +L+DG  + 
Sbjct: 155 MEEKD-CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNA-MPNICTYAILLDGSFKA 212

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G  D A  +   MK  G   NVF     +N   + G+++EA+E+  +M +  LKPD + Y
Sbjct: 213 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 272

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T L++ F ++G+V  AL L +EM  +    DIVTFN+++  L + GK  +   +   +  
Sbjct: 273 TNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMRE 331

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+  + A+Y  +LN + +KG    A+EL   M  R  +P+  T N ++  LC+AG  E+
Sbjct: 332 MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMEN 391

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRK---LLFAFELLDELVIK 513
           A   L  +V MG  P S ++ +L+ +  + R+   +L   ELL  + +K
Sbjct: 392 AIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLK 440



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 36/339 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   ++ LI  + K+G L  AF+VL++M     + PN+ TY+ L+DG  K G    A++
Sbjct: 162 PNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN-AMPNICTYAILLDGSFKAGWQDIALD 220

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+ +M  +  +  +    +  ++   R G+++ A++++  M + G  P++ NYT LM+GF
Sbjct: 221 LYSKM-KQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 279

Query: 320 CKEGKLQEA----------------------------------KEVFDEMKNFLLKPDTI 345
            K GK+  A                                  + ++  M+   L PD  
Sbjct: 280 LKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLA 339

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y T++N   + G    ALEL  EMK R    + +T NI++ GLC  G++E A+ +L+++
Sbjct: 340 TYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEM 399

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+Y    +YRI+LN S +    +  ++   L++           N L+  LCK GM 
Sbjct: 400 VLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMT 459

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
             A   L  + E G   ++ ++  L+   C    L  AF
Sbjct: 460 RKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAF 498



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 175/353 (49%), Gaps = 8/353 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG--TLES 220
           KP L   +  ++  ++S +V  A N  +       +  +   FN+LI    K G    ES
Sbjct: 266 KPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSK-NVVFDIVTFNVLINCLFKLGKSDTES 324

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
            +  ++EM  S    P+L TY+T+++G  K G +  A+EL+ EM S+ +++P+A+T N++
Sbjct: 325 IYSAMREMGLS----PDLATYNTMLNGNFKKGNWTSALELWNEMKSR-KLIPNAITCNIM 379

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I+G C  G+++ A  I++ M   G  P    Y  L+N   K  +     +  + + N  L
Sbjct: 380 INGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQL 439

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           K D   Y  LI+  C+ G   +A  +LK+M+ERG  AD  T+N ++ G C    ++ A  
Sbjct: 440 KVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFM 499

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
               +  + +  +  +Y ++L    + G + +A +LL  +  RG +P+  T   L+   C
Sbjct: 500 TYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHC 559

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           K    ++       +V  GF P+  ++ +L+    +  K+  A EL++E+  K
Sbjct: 560 KVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTK 612



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 188/416 (45%), Gaps = 10/416 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++++ + +Q G   N       ++ + R  + E  + ++ +M     K     + NLM
Sbjct: 218 ALDLYSKM-KQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLM 276

Query: 138 KHFSNCSLHERVLEMFHKIHP--ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             F         L +  ++    +  +  +   +  CL  L +S+   +       + + 
Sbjct: 277 DGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYS-----AMRE 331

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P+   +N ++  + K+G   SA E+  EMK  ++  PN IT + +I+GLC+ GR  
Sbjct: 332 MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKL-IPNAITCNIMINGLCEAGRME 390

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            AI++ +EMV    + P + TY +L++   +  + D   +  E + N     +   Y  L
Sbjct: 391 NAIDILKEMVLMG-LYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNIL 449

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++  CK G  ++A  V  +M+   +  DT  Y  LI+ +C +  +  A      M     
Sbjct: 450 ISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERV 509

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             DI T+N++LGGL + G I EA  +L ++   G+  N  +Y  ++   C+    ++ + 
Sbjct: 510 SPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLR 569

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +   M+ +GF+P     N L+    K G  + A   +  +   G  P   ++ +L+
Sbjct: 570 IYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILI 625



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 155/296 (52%), Gaps = 2/296 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           LE A  + +EM  S + +P+++T+ +++ GLCK+G+  E   L  EM  K  +  + ++Y
Sbjct: 5   LEEALTLYEEMVGSGI-FPDVVTFGSILYGLCKHGKLSEGKLLLREM-GKMGMNLNNVSY 62

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
            +L+D   + GKV  A   +  M   G N +V   T L++G  K G+++EA+ +F  +  
Sbjct: 63  TILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQ 122

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             L P+ I Y+ LI+  C+ G ++ A   L EM+E+ C  +++T++ ++ G  ++G + +
Sbjct: 123 LNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHD 182

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L K+ +     N  +Y I+L+ S + G  + A++L   M   G   +    +  + 
Sbjct: 183 AFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVN 242

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            + ++G  E+A   +  +   G KP+  ++  L++   +  K+  A  L  E+  K
Sbjct: 243 NMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSK 298



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 49/227 (21%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           +++LK +  ++NILI + CK G    A  VLK+M++  +   +  TY+ LI G C +   
Sbjct: 436 NMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGI-IADTTTYNALIHGYCISSHL 494

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           + A   +  M+S +++ PD  TYN+L+ G  + G +  A  ++  +K  G  PN   Y T
Sbjct: 495 KRAFMTYSTMLS-ERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYET 553

Query: 315 LMNGFCK-----------------------------------EGKLQEAKEVFDEMKNFL 339
           LM G CK                                    GK+++AKE+ +EM+   
Sbjct: 554 LMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKG 613

Query: 340 LKPDTIGYTTLINCFCRAGRVD------------EALELLKEMKERG 374
           + P    Y  LI  +C   ++             EA  L  EM +RG
Sbjct: 614 VSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRG 660



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 17/227 (7%)

Query: 162 EKPSLKAISTCLNLLIESNQVD--LAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTL 218
           E+  + A +T  N LI    +   L + F+ YS     R+ P+   +N+L+    K G +
Sbjct: 470 EERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLI 529

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
             A ++L E+KK  +  PN  TY TL+ G CK    +E + ++ EMV K   +P    YN
Sbjct: 530 HEADDLLSEIKKRGL-VPNACTYETLMCGHCKVRNTKECLRIYCEMVIKG-FIPKPRAYN 587

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL------------Q 326
           +LI  F + GK+ +AK++M  M+  G +P    Y  L+ G+C   K+             
Sbjct: 588 MLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRA 647

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           EAK +F EM +    P       + + F   G+  +A  LLK   +R
Sbjct: 648 EAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKR 694



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 98/194 (50%)

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +  L+EA  +++EM    + PD + + +++   C+ G++ E   LL+EM + G   + V+
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           + I+L  L + GK+ EAL  L  +   G   +  +  ++++   + G++++A  L   + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
               +P+Y T + L+   CK G    A  AL  + E    P   +++ L+    +   L 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 502 FAFELLDELVIKES 515
            AF++L ++V K +
Sbjct: 182 DAFKVLRKMVHKNA 195


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 205/394 (52%), Gaps = 8/394 (2%)

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           TY  C  +  ++  L++ +    + +  LE+F ++  +    PS+   +  L  +++S +
Sbjct: 155 TYRLCNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGE 213

Query: 182 VDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
                +FLK   + L+ K  P+   FNILI   C  G+ E +  ++++M+KS  + P ++
Sbjct: 214 DVSVWSFLK---EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA-PTIV 269

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY+T++   CK GRF+ AIEL + M SK  +  D  TYN+LI   CR  ++ +   ++  
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+    +PN   Y TL+NGF  EGK+  A ++ +EM +F L P+ + +  LI+     G 
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             EAL++   M+ +G     V++ ++L GLC+  + + A G   ++  +G+ + + +Y  
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G L++A+ LL  M   G  P   T + L+   CK G  + A   +  +  +G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P    ++ L+   CR   L  A  + + ++++
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 542



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 203/434 (46%), Gaps = 22/434 (5%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFS 141
           E+ G+     TY T+L    +  +F+A   +L  M       + C +      N++ H  
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY------NMLIH-- 311

Query: 142 NCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-- 197
           +     R+ + +  +  + +    P+    +T +N      +V +A   L   N+ L   
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL---NEMLSFG 368

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   FN LI  H   G  + A ++   M+   ++ P+ ++Y  L+DGLCKN  F  A
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT-PSEVSYGVLLDGLCKNAEFDLA 427

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              +  M  ++ +    +TY  +IDG C+ G +D A  ++  M  +G +P++  Y+ L+N
Sbjct: 428 RGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK G+ + AKE+   +    L P+ I Y+TLI   CR G + EA+ + + M   G   
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  TFN+++  LC+ GK+ EA   +  +  DGI  N  S+  ++N     GE  KA  + 
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P + T   LL  LCK G   +A   L  L  +    ++  +  L+  +C+ 
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666

Query: 498 RKLLFAFELLDELV 511
             L  A  L  E+V
Sbjct: 667 GNLAKAVSLFGEMV 680



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 179/376 (47%), Gaps = 16/376 (4%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-HFSNCSLHERVLEM 152
           N  TY T+++  +   K      +L +M       +   F  L+  H S  +  E  L+M
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE-ALKM 395

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN-TCIFNI---- 207
           F+ +       PS  +    L+ L ++ + DLA+ F      ++R+K N  C+  I    
Sbjct: 396 FYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGF------YMRMKRNGVCVGRITYTG 448

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK G L+ A  +L EM K  +  P+++TYS LI+G CK GRF+ A E+    + +
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGID-PDIVTYSALINGFCKVGRFKTAKEIVCR-IYR 506

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + P+ + Y+ LI   CR G +  A +I E M   G   + F +  L+   CK GK+ E
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E    M +  + P+T+ +  LIN +  +G   +A  +  EM + G      T+  +L 
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G + EA   L+ L      ++   Y  +L   C+ G L KA+ L   M+ R  LP
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686

Query: 448 HYATSNELLVRLCKAG 463
              T   L+  LC+ G
Sbjct: 687 DSYTYTSLISGLCRKG 702



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 198/423 (46%), Gaps = 3/423 (0%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   ++ T+  ++  L +  K    +  +R MT +    +   F  L+  + N     +
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              +F ++  +    P+     + L  L +   +  A+ FLK S   +    +T ++N L
Sbjct: 602 AFSVFDEMTKVGHH-PTFFTYGSLLKGLCKGGHLREAEKFLK-SLHAVPAAVDTVMYNTL 659

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +   CK G L  A  +  EM +  +  P+  TY++LI GLC+ G+   AI   +E  ++ 
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSI-LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LP+ + Y   +DG  + G+        E M N G  P++     +++G+ + GK+++ 
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++  EM N    P+   Y  L++ + +   V  +  L + +   G   D +T + ++ G
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +C    +E  L +L+     G+ +++ ++ ++++  C  GE+  A +L+++M   G    
Sbjct: 839 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T + ++  L +    +++ + L  + + G  PES  +  L+  +CR   +  AF + +
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958

Query: 509 ELV 511
           E++
Sbjct: 959 EMI 961



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 11/290 (3%)

Query: 171  TCLNLLI---ESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
            TC +L++   ESN +++    LK +  + + +   T  FN+LI   C  G +  AF+++K
Sbjct: 831  TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT--FNMLISKCCANGEINWAFDLVK 888

Query: 227  EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
             M    +S     T   ++  L +N RF+E+  +  EM SK  I P++  Y  LI+G CR
Sbjct: 889  VMTSLGISLDK-DTCDAMVSVLNRNHRFQESRMVLHEM-SKQGISPESRKYIGLINGLCR 946

Query: 287  GGKVDRAKKIMEFM-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
             G +  A  + E M  +  C PNV   + ++    K GK  EA  +   M    L P   
Sbjct: 947  VGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 1005

Query: 346  GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
             +TTL++  C+ G V EALEL   M   G K D+V++N+++ GLC +G +  A  + E++
Sbjct: 1006 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065

Query: 406  WYDGIYLNKASYR-IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
              DG   N  +Y+ ++     ++     A  +L+ +L RGF+   + S +
Sbjct: 1066 KGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQD 1115



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 2/311 (0%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+    N +I  + + G +E   ++L EM  +Q   PNL TY+ L+ G  K      +  
Sbjct: 757  PDIVTTNAMIDGYSRMGKIEKTNDLLPEMG-NQNGGPNLTTYNILLHGYSKRKDVSTSFL 815

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            L+  ++  + ILPD LT + L+ G C    ++   KI++     G   + + +  L++  
Sbjct: 816  LYRSII-LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            C  G++  A ++   M +  +  D      +++   R  R  E+  +L EM ++G   + 
Sbjct: 875  CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
              +  ++ GLCR G I+ A  + E++    I     +   ++    + G+ ++A  LLR 
Sbjct: 935  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            ML    +P  A+   L+   CK G   +A      +   G K +  S+ +L+  +C    
Sbjct: 995  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1054

Query: 500  LLFAFELLDEL 510
            +  AFEL +E+
Sbjct: 1055 MALAFELYEEM 1065



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 8/315 (2%)

Query: 171  TCLNLLIE--SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            T  N+L+   S + D++ +FL Y +  L  + P+    + L+   C+   LE   ++LK 
Sbjct: 795  TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 854

Query: 228  MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
                 +      T++ LI   C NG    A +L + M S   I  D  T + ++    R 
Sbjct: 855  FICRGVEVDRY-TFNMLISKCCANGEINWAFDLVKVMTSLG-ISLDKDTCDAMVSVLNRN 912

Query: 288  GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
             +   ++ ++  M   G +P    Y  L+NG C+ G ++ A  V +EM    + P  +  
Sbjct: 913  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972

Query: 348  TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            + ++    + G+ DEA  LL+ M +      I +F  ++   C+ G + EAL +   +  
Sbjct: 973  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 1032

Query: 408  DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR--LCKAGMA 465
             G+ L+  SY +++   C KG++  A EL   M   GFL + AT+ + L+R  L +    
Sbjct: 1033 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN-ATTYKALIRGLLARETAF 1091

Query: 466  EDAAIALFGLVEMGF 480
              A I L  L+  GF
Sbjct: 1092 SGADIILKDLLARGF 1106


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 204/400 (51%), Gaps = 9/400 (2%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +  G   +  TY T++  L    + +A   +L +M     + +  ++  L++ +      
Sbjct: 150 QASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRW 209

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           + V ++F  +   +R   KP +   +  ++ L +  +   A        Q   L+PN   
Sbjct: 210 QDVGKVFEDM---SRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQR-GLEPNVVT 265

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N+LI   CK G++  A  + KEM    ++ P+++TY+TLI GL       EA+   EEM
Sbjct: 266 YNVLINSLCKEGSVREALTLRKEMDDKGVA-PDVVTYNTLIAGLSGVLEMDEAMSFLEEM 324

Query: 265 VSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           +  D ++ PD +T+N +I G C+ G++ +A K+ E M   GC  N+  Y  L+ GF +  
Sbjct: 325 IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVH 384

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K++ A  + DE+    L+PD+  Y+ LIN F +   VD A + L  M++RG KA++  + 
Sbjct: 385 KVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYI 444

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            +L  +C++G +E A+G+  ++  +   L+  +Y  +++ +C+ G+++   +L++ ML  
Sbjct: 445 PLLAAMCQQGMMERAMGLFNEMDKN-CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDE 503

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           G  P   T + L+    K G  E+A   L  +   GF P+
Sbjct: 504 GLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPD 543



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 186/364 (51%), Gaps = 7/364 (1%)

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           +++M  + HP  R  P+  + +T +  L  S +   A   L+ S Q   ++ +   +  L
Sbjct: 108 LVDMSREAHPAAR--PNAVSYTTVMRGLCASRRTGEAVALLR-SMQASGVRADVVTYGTL 164

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I+  C    L++A E+L EM  S +  PN++ YS L+ G C++GR+++  ++FE+M S+ 
Sbjct: 165 IRGLCDASELDAALELLDEMCGSGVQ-PNVVVYSCLLRGYCRSGRWQDVGKVFEDM-SRR 222

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            I PD + +  LID  C+ GK  +A K+ + M   G  PNV  Y  L+N  CKEG ++EA
Sbjct: 223 GIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREA 282

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM--KERGCKADIVTFNIIL 386
             +  EM +  + PD + Y TLI        +DEA+  L+EM   +   + D+VTFN ++
Sbjct: 283 LTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVI 342

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+ G++ +A+ + E +   G   N  +Y  ++    +  +++ A+ L+  +   G  
Sbjct: 343 HGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLE 402

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T + L+    K    + A   L  + + G K E   +  L+  +C+   +  A  L
Sbjct: 403 PDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGL 462

Query: 507 LDEL 510
            +E+
Sbjct: 463 FNEM 466



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 155/279 (55%), Gaps = 6/279 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P +   +T +  L    ++D A +FL+   Q    ++P+   FN +I   CK G +  A 
Sbjct: 296 PDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAV 355

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           +V +EM   +    NL+TY+ LI G  +  + + A+ L +E+ +   + PD+ TY++LI+
Sbjct: 356 KV-REMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDEL-AISGLEPDSFTYSILIN 413

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLK 341
           GF +  +VDRA+K +  M+  G    +F+Y  L+   C++G ++ A  +F+EM KN  L 
Sbjct: 414 GFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL- 472

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D I Y+T+I+  C++G +    +L+++M + G   D VT+++++    + G +EEA  +
Sbjct: 473 -DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERV 531

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           L+++   G   + A +  ++     +G+ +K ++L+  M
Sbjct: 532 LKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEM 570



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 122/227 (53%), Gaps = 4/227 (1%)

Query: 237 NLITYSTLIDGLCKNG--RFREAIELFEEMV--SKDQILPDALTYNVLIDGFCRGGKVDR 292
           + ++Y+T++  LC+ G    R+A  L  +M   +     P+A++Y  ++ G C   +   
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A  ++  M+ +G   +V  Y TL+ G C   +L  A E+ DEM    ++P+ + Y+ L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            +CR+GR  +  ++ ++M  RG K D++ F  ++  LC+EGK  +A  + + +   G+  
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
           N  +Y +++N  C++G + +A+ L + M  +G  P   T N L+  L
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL 308



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 273 DALTYNVLIDGFCR--GGKVDRAKKIMEFMKNNG---CNPNVFNYTTLMNGFCKEGKLQE 327
           DA++YN ++   CR  G  + +A+ ++  M         PN  +YTT+M G C   +  E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +   M+   ++ D + Y TLI   C A  +D ALELL EM   G + ++V ++ +L 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G CR G+ ++   + E +   GI  +   +  +++  C++G+  KA ++  +M+ RG  P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +  T N L+  LCK G   +A      + + G  P+  ++  L+  +    ++  A   L
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 508 DELV 511
           +E++
Sbjct: 322 EEMI 325



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 3/189 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P++  ++ILI    K   ++ A + L  M++  +    L  Y  L+  +C+ G    A
Sbjct: 401 LEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIK-AELFHYIPLLAAMCQQGMMERA 459

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF EM     +  DA+ Y+ +I G C+ G +   K++++ M + G  P+   Y+ L+N
Sbjct: 460 MGLFNEMDKNCGL--DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLIN 517

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            + K G L+EA+ V  +M      PD   + +LI  +   G+ D+ L+L+ EM+ +    
Sbjct: 518 MYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAF 577

Query: 378 DIVTFNIIL 386
           D    + I+
Sbjct: 578 DPKIISTII 586


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 217/439 (49%), Gaps = 15/439 (3%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLN 135
           + +++ + +  G   N ATY  +LD L ++ +F+ V  V  +M     +      GI ++
Sbjct: 248 MRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIH 307

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN-Q 194
            +    +     RV     K   +          ++ +    ++ +V  A  F   +   
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVI----DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            LR   N   +NI+IK     G ++ A E+   ++K     P+ +T+ TLI GLC+NG  
Sbjct: 364 GLR---NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFA 420

Query: 255 REAIELFEEM-VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            +A  +FEE  VS  Q+  D  +Y+ +I+G C  G++  A K+ E M  +GC PN   Y 
Sbjct: 421 NKAFTIFEEARVSGKQL--DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYN 478

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++GFC+  +  +A  ++ +M +    P  I Y TLI+  C+A +  EA  + +EM E 
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN 538

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   DI T+  ++ GL  + KI++AL + +++ Y G+ ++   + I+++  C  G++++A
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598

Query: 434 IELLRLML-CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + +   M   +   P+  T N L+  L + G  + AA     + E G +P+  S+   ++
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658

Query: 493 LICRGRKLLFAFELLDELV 511
            +C   ++    +LLDE++
Sbjct: 659 GLCSCDRIHEGIQLLDEVL 677



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 195/458 (42%), Gaps = 74/458 (16%)

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
           +F E   L ++  FS   + +  L+ F  +  I    P +++ +  L+  + + +   A 
Sbjct: 80  RFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDAD 139

Query: 187 NF---LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
            F   L +     R+ PN   +NI+++  C RG L+ A  +   +++ Q++ P+ ITYST
Sbjct: 140 AFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVA-PDCITYST 198

Query: 244 LIDGLCKNGRFREAIELFEEM----VSKDQILPDAL------------------------ 275
           L+ GL K  R   A++L +EM    V  D +  +AL                        
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258

Query: 276 -------TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
                  TYNV++DG C+ G+     ++ E M  N   P+V  Y  L++G C+ G +  A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGR----------------------------- 359
             V+ E+    L  D   Y +L+  FC+AGR                             
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGL 378

Query: 360 -----VDEALELLKEM-KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
                VDEA+EL   + K+  C  D VTF  ++ GLC+ G   +A  + E+    G  L+
Sbjct: 379 FDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD 438

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             SY  ++N  C  G L  A+++   M   G  P+    N L+   C+     DA     
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + + G  P   ++  L++ +C+  K   A  +  E+V
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMV 536



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/534 (22%), Positives = 222/534 (41%), Gaps = 81/534 (15%)

Query: 54  RKRSRFISHGAAISLIKCEKE--PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF 111
           R R RF    A + L    +   P  AL+ F  +    G N    ++  +LD   R ++F
Sbjct: 76  RHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRF 135

Query: 112 EAVDAVLRQMTYETCKFHEGIFLNLMKH----FSNCSLHE--RVLEMFHKIHPITREKPS 165
              DA    +++    F   I  NL  +     S C+  +  R + +F  +    +  P 
Sbjct: 136 SDADAFFASLSHGA--FGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRR-RQVAPD 192

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
               ST +  L + +++D A + L    +   ++P+   +N L+    K G  E    V 
Sbjct: 193 CITYSTLMCGLAKQDRLDHALDLLDEMPRS-GVQPDVVCYNALLGGCFKAGEFEKVMRVW 251

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS------------------- 266
            ++ K   + PNL TY+ ++DGLCK GRF+E  E++E MV+                   
Sbjct: 252 DKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCR 311

Query: 267 ---------------KDQILPDALTYNVLIDGFCRGGKVDRAKKIME------------- 298
                          K  ++ DA  YN L+ GFC+ G+V  A K  +             
Sbjct: 312 SGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTY 371

Query: 299 ----------------------FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
                                   K+  C P+   + TL++G C+ G   +A  +F+E +
Sbjct: 372 NIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEAR 431

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               + D   Y+++IN  C  GR+ +A+++ ++M + GCK +   +N ++ G C+  +  
Sbjct: 432 VSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS 491

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +A+ +  K+  +G      +Y  +++  C+  + ++A  + R M+  GF P   T   L+
Sbjct: 492 DAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             L      +DA      ++  G K +     +L+  +C   K+  A  +  ++
Sbjct: 552 RGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM 605



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 36/233 (15%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN+ I+N LI   C+      A  +  +M  +  S P +ITY+TLIDGLCK  +++EA 
Sbjct: 471 KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS-PTVITYNTLIDGLCKAEKYQEAS 529

Query: 259 ELFEEMVS------------------KDQILPDALT----------------YNVLIDGF 284
            +  EMV                    D+ + DAL+                +N+LI G 
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589

Query: 285 CRGGKVDRAKKIMEFMK-NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           C  GKVD A  +   MK    C PN+  Y TLM+G  + G + +A  ++  +    L+PD
Sbjct: 590 CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
            I Y T I   C   R+ E ++LL E+  RG    ++T+NI++  + + G I+
Sbjct: 650 IISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 139/329 (42%), Gaps = 61/329 (18%)

Query: 222 FEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           F +L+ +  S  S+ P L+    L+  L    RF E+  L         I+PDA      
Sbjct: 51  FHLLRRLATSSPSHLPCLLN---LLPRLRHRPRFSESAALVVLSAFSRAIMPDA------ 101

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF--------------------- 319
                    +D  + +   +   GCNP + ++  L++ F                     
Sbjct: 102 --------ALDAFRALPSIL---GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAF 150

Query: 320 ------------------CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                             C  G L  A  +FD ++   + PD I Y+TL+    +  R+D
Sbjct: 151 GRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLD 210

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD-GIYLNKASYRIV 420
            AL+LL EM   G + D+V +N +LGG  + G+ E+ + + +KL  D G   N A+Y ++
Sbjct: 211 HALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVM 270

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           L+  C+ G  ++  E+   M+     P   T   L+  LC++G  + AA     +++ G 
Sbjct: 271 LDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGL 330

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDE 509
             ++  +  LV+  C+  ++  A++  D 
Sbjct: 331 VIDAAMYNSLVKGFCQAGRVQEAWKFWDS 359



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 122/264 (46%), Gaps = 3/264 (1%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           +Y+++++ L    +      V  +M  + CK +  I+  L+  F         + ++ K+
Sbjct: 441 SYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKM 500

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P++   +T ++ L ++ +   A +  +   ++    P+   +  LI+      
Sbjct: 501 AD-NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN-GFTPDITTYGSLIRGLFSDK 558

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            ++ A  + K++    +   +++ ++ LI GLC  G+  EA+ +F +M  K    P+ +T
Sbjct: 559 KIDDALSIWKQILYKGLKV-DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVT 617

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN L+DG    G +D+A  +   +  +G  P++ +Y T + G C   ++ E  ++ DE+ 
Sbjct: 618 YNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL 677

Query: 337 NFLLKPDTIGYTTLINCFCRAGRV 360
           +  + P  I +  L+    + G +
Sbjct: 678 SRGIIPTVITWNILVRAVIKYGPI 701



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 38/203 (18%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF  +  TY +++  L   KK +   ++ +Q+ Y      +G+ +++M H  N  +H 
Sbjct: 537 ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY------KGLKVDVMMH--NILIHG 588

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
                                       L  + +VD A +      +     PN   +N 
Sbjct: 589 ----------------------------LCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+    + G ++ A  +   + +  +  P++I+Y+T I GLC   R  E I+L +E++S+
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLE-PDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679

Query: 268 DQILPDALTYNVLIDGFCRGGKV 290
             I+P  +T+N+L+    + G +
Sbjct: 680 -GIIPTVITWNILVRAVIKYGPI 701


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 164/283 (57%), Gaps = 7/283 (2%)

Query: 173 LNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            N+L+ S     ++ LAQ+      +   L+P+   FN L+  + K G L   F +   M
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITK-WGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           + S +  P++ TYS LI+GLCK  +  +A ELF+EM+  + ++P+++++  LIDG C+ G
Sbjct: 198 QASGVQ-PDVYTYSVLINGLCKESKLDDANELFDEMLD-NGLVPNSVSFTTLIDGHCKDG 255

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           +VD A +I + M +   +P++  Y TL+ G CK G L++A+++ +EM    LKPD I YT
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYT 315

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           TLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML ++   
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           G+     +Y +++N  C+KG++    +L++ M   G++P   T
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N L++G+ + G ++ 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLNE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE KL +A E+FDEM +  L P+++ +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC+ G +++A  ++ ++   G+  
Sbjct: 250 GHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +L+ E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM 407



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 147/248 (59%), Gaps = 5/248 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I+    DL + F LK + Q   ++P+   +++LI   CK   L+ A
Sbjct: 168 RPSVVSFNTLMNGYIKLG--DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDA 225

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM  + +  PN ++++TLIDG CK+GR   A+E++++M+S+  + PD +TYN LI
Sbjct: 226 NELFDEMLDNGL-VPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQ-SLSPDLITYNTLI 283

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A+ ++  M   G  P+   YTTL++G CKEG L+ A E    M    ++
Sbjct: 284 YGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIR 343

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K +I T+ +I+   C++G +     +
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKL 403

Query: 402 LEKLWYDG 409
           ++++  DG
Sbjct: 404 MKEMQRDG 411



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 160/319 (50%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ FCKEG+++ A+ VFD +  + L+P  + + TL+N + + G ++E   L
Sbjct: 134 ASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  S+  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 DGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGSCKEGDLETAFE 332


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 217/439 (49%), Gaps = 15/439 (3%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLN 135
           + +++ + +  G   N ATY  +LD L ++ +F+ V  V  +M     +      GI ++
Sbjct: 248 MRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIH 307

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN-Q 194
            +    +     RV     K   +          ++ +    ++ +V  A  F   +   
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVI----DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            LR   N   +NI+IK     G ++ A E+   ++K     P+ +T+ TLI GLC+NG  
Sbjct: 364 GLR---NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFA 420

Query: 255 REAIELFEEM-VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            +A  +FEE  VS  Q+  D  +Y+ +I+G C  G++  A K+ E M  +GC PN   Y 
Sbjct: 421 NKAFTIFEEARVSGKQL--DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYN 478

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++GFC+  +  +A  ++ +M +    P  I Y TLI+  C+A +  EA  + +EM E 
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN 538

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   DI T+  ++ GL  + KI++AL + +++ Y G+ ++   + I+++  C  G++++A
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598

Query: 434 IELLRLML-CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           + +   M   +   P+  T N L+  L + G  + AA     + E G +P+  S+   ++
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658

Query: 493 LICRGRKLLFAFELLDELV 511
            +C   ++    +LLDE++
Sbjct: 659 GLCSCDRIHEGIQLLDEVL 677



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 195/459 (42%), Gaps = 76/459 (16%)

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
           +F E   L ++  FS   + +  L+ F  +  I    P +++ +  L+  + + +   A 
Sbjct: 80  RFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDAD 139

Query: 187 NF---LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
            F   L +     R+ PN   +NI+++  C RG L+ A  +   +++ Q++ P+ ITYST
Sbjct: 140 AFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVA-PDRITYST 198

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDAL---------------------------- 275
           L+ GL K  R   A++L +EM  + ++ PD +                            
Sbjct: 199 LMCGLAKQDRLDHALDLLDEM-PRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKD 257

Query: 276 --------TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
                   TYNV++DG C+ G+     ++ E M  N   P+V  Y  L++G C+ G +  
Sbjct: 258 PGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDG 317

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR---------------------------- 359
           A  V+ E+    L  D   Y +L+  FC+AGR                            
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKG 377

Query: 360 ------VDEALELLKEM-KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
                 VDEA+EL   + K+  C  D VTF  ++ GLC+ G   +A  + E+    G  L
Sbjct: 378 LFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQL 437

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  SY  ++N  C  G L  A+++   M   G  P+    N L+   C+     DA    
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             + + G  P   ++  L++ +C+  K   A  +  E+V
Sbjct: 498 SKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMV 536



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/511 (22%), Positives = 215/511 (42%), Gaps = 79/511 (15%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
           P  AL+ F  +    G N    ++  +LD   R ++F   DA    +++    F   I  
Sbjct: 99  PDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGA--FGRRIAP 156

Query: 135 NLMKH----FSNCSLHE--RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
           NL  +     S C+  +  R + +F  +    +  P     ST +  L + +++D A + 
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRR-RQVAPDRITYSTLMCGLAKQDRLDHALDL 215

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L    +  R++P+   +N L+    K G  E    V  ++ K   + PNL TY+ ++DGL
Sbjct: 216 LDEMPRS-RVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274

Query: 249 CKNGRFREAIELFEEMVS----------------------------------KDQILPDA 274
           CK GRF+E  E++E MV+                                  K  ++ DA
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDA 334

Query: 275 LTYNVLIDGFCRGGKVDRAKKIME-----------------------------------F 299
             YN L+ GFC+ G+V  A K  +                                    
Sbjct: 335 AMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
            K+  C P+   + TL++G C+ G   +A  +F+E +    + D   Y+++IN  C  GR
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           + +A+++ ++M + GCK +   +N ++ G C+  +  +A+ +  K+  +G      +Y  
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+  + ++A  + R M+  GF P   T   L+  L      +DA      ++  G
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
            K +     +L+  +C   K+  A  +  ++
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDM 605



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 36/233 (15%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN+ I+N LI   C+      A  +  +M  +  S P +ITY+TLIDGLCK  +++EA 
Sbjct: 471 KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS-PTVITYNTLIDGLCKAEKYQEAS 529

Query: 259 ELFEEMVS------------------KDQILPDALT----------------YNVLIDGF 284
            +  EMV                    D+ + DAL+                +N+LI G 
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589

Query: 285 CRGGKVDRAKKIMEFMK-NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           C  GKVD A  +   MK    C PN+  Y TLM+G  + G + +A  ++  +    L+PD
Sbjct: 590 CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
            I Y T I   C   R+ E ++LL E+  RG    ++T+NI++  + + G I+
Sbjct: 650 IISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 122/264 (46%), Gaps = 3/264 (1%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           +Y+++++ L    +      V  +M  + CK +  I+  L+  F         + ++ K+
Sbjct: 441 SYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKM 500

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P++   +T ++ L ++ +   A +  +   ++    P+   +  LI+      
Sbjct: 501 AD-NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN-GFTPDITTYGSLIRGLFSDK 558

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            ++ A  + K++    +   +++ ++ LI GLC  G+  EA+ +F +M  K    P+ +T
Sbjct: 559 KIDDALSIWKQILYKGLKV-DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVT 617

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN L+DG    G +D+A  +   +  +G  P++ +Y T + G C   ++ E  ++ DE+ 
Sbjct: 618 YNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL 677

Query: 337 NFLLKPDTIGYTTLINCFCRAGRV 360
           +  + P  I +  L+    + G +
Sbjct: 678 SRGIIPTVITWNILVRAVIKYGPI 701



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 38/203 (18%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF  +  TY +++  L   KK +   ++ +Q+ Y      +G+ +++M H  N  +H 
Sbjct: 537 ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY------KGLKVDVMMH--NILIHG 588

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
                                       L  + +VD A +      +     PN   +N 
Sbjct: 589 ----------------------------LCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L+    + G ++ A  +   + +  +  P++I+Y+T I GLC   R  E I+L +E++S+
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLE-PDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679

Query: 268 DQILPDALTYNVLIDGFCRGGKV 290
             I+P  +T+N+L+    + G +
Sbjct: 680 -GIIPTVITWNILVRAVIKYGPI 701


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 205/394 (52%), Gaps = 8/394 (2%)

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           TY  C  +  ++  L++ +    + +  LE+F ++  +    PS+   +  L  +++S +
Sbjct: 115 TYRLCNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGE 173

Query: 182 VDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
                +FLK   + L+ K  P+   FNILI   C  G+ E +  ++++M+KS  + P ++
Sbjct: 174 DVSVWSFLK---EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA-PTIV 229

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY+T++   CK GRF+ AIEL + M SK  +  D  TYN+LI   CR  ++ +   ++  
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+    +PN   Y TL+NGF  EGK+  A ++ +EM +F L P+ + +  LI+     G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             EAL++   M+ +G     V++ ++L GLC+  + + A G   ++  +G+ + + +Y  
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G L++A+ LL  M   G  P   T + L+   CK G  + A   +  +  +G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P    ++ L+   CR   L  A  + + ++++
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 203/434 (46%), Gaps = 22/434 (5%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFS 141
           E+ G+     TY T+L    +  +F+A   +L  M       + C +      N++ H  
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY------NMLIH-- 271

Query: 142 NCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-- 197
           +     R+ + +  +  + +    P+    +T +N      +V +A   L   N+ L   
Sbjct: 272 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL---NEMLSFG 328

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   FN LI  H   G  + A ++   M+   ++ P+ ++Y  L+DGLCKN  F  A
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT-PSEVSYGVLLDGLCKNAEFDLA 387

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              +  M  ++ +    +TY  +IDG C+ G +D A  ++  M  +G +P++  Y+ L+N
Sbjct: 388 RGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK G+ + AKE+   +    L P+ I Y+TLI   CR G + EA+ + + M   G   
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  TFN+++  LC+ GK+ EA   +  +  DGI  N  S+  ++N     GE  KA  + 
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P + T   LL  LCK G   +A   L  L  +    ++  +  L+  +C+ 
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626

Query: 498 RKLLFAFELLDELV 511
             L  A  L  E+V
Sbjct: 627 GNLAKAVSLFGEMV 640



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 179/376 (47%), Gaps = 16/376 (4%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-HFSNCSLHERVLEM 152
           N  TY T+++  +   K      +L +M       +   F  L+  H S  +  E  L+M
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE-ALKM 355

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN-TCIFNI---- 207
           F+ +       PS  +    L+ L ++ + DLA+ F      ++R+K N  C+  I    
Sbjct: 356 FYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGF------YMRMKRNGVCVGRITYTG 408

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK G L+ A  +L EM K  +  P+++TYS LI+G CK GRF+ A E+    + +
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGID-PDIVTYSALINGFCKVGRFKTAKEIVCR-IYR 466

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + P+ + Y+ LI   CR G +  A +I E M   G   + F +  L+   CK GK+ E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E    M +  + P+T+ +  LIN +  +G   +A  +  EM + G      T+  +L 
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G + EA   L+ L      ++   Y  +L   C+ G L KA+ L   M+ R  LP
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646

Query: 448 HYATSNELLVRLCKAG 463
              T   L+  LC+ G
Sbjct: 647 DSYTYTSLISGLCRKG 662



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 198/423 (46%), Gaps = 3/423 (0%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   ++ T+  ++  L +  K    +  +R MT +    +   F  L+  + N     +
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
              +F ++  +    P+     + L  L +   +  A+ FLK S   +    +T ++N L
Sbjct: 562 AFSVFDEMTKVGHH-PTFFTYGSLLKGLCKGGHLREAEKFLK-SLHAVPAAVDTVMYNTL 619

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +   CK G L  A  +  EM +  +  P+  TY++LI GLC+ G+   AI   +E  ++ 
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSI-LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            +LP+ + Y   +DG  + G+        E M N G  P++     +++G+ + GK+++ 
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            ++  EM N    P+   Y  L++ + +   V  +  L + +   G   D +T + ++ G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +C    +E  L +L+     G+ +++ ++ ++++  C  GE+  A +L+++M   G    
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T + ++  L +    +++ + L  + + G  PES  +  L+  +CR   +  AF + +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918

Query: 509 ELV 511
           E++
Sbjct: 919 EMI 921



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 11/290 (3%)

Query: 171  TCLNLLI---ESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
            TC +L++   ESN +++    LK +  + + +   T  FN+LI   C  G +  AF+++K
Sbjct: 791  TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT--FNMLISKCCANGEINWAFDLVK 848

Query: 227  EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
             M    +S     T   ++  L +N RF+E+  +  EM SK  I P++  Y  LI+G CR
Sbjct: 849  VMTSLGISLDK-DTCDAMVSVLNRNHRFQESRMVLHEM-SKQGISPESRKYIGLINGLCR 906

Query: 287  GGKVDRAKKIMEFM-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
             G +  A  + E M  +  C PNV   + ++    K GK  EA  +   M    L P   
Sbjct: 907  VGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 346  GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
             +TTL++  C+ G V EALEL   M   G K D+V++N+++ GLC +G +  A  + E++
Sbjct: 966  SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025

Query: 406  WYDGIYLNKASYR-IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
              DG   N  +Y+ ++     ++     A  +L+ +L RGF+   + S +
Sbjct: 1026 KGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQD 1075



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 2/311 (0%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            P+    N +I  + + G +E   ++L EM  +Q   PNL TY+ L+ G  K      +  
Sbjct: 717  PDIVTTNAMIDGYSRMGKIEKTNDLLPEMG-NQNGGPNLTTYNILLHGYSKRKDVSTSFL 775

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            L+  ++  + ILPD LT + L+ G C    ++   KI++     G   + + +  L++  
Sbjct: 776  LYRSII-LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834

Query: 320  CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            C  G++  A ++   M +  +  D      +++   R  R  E+  +L EM ++G   + 
Sbjct: 835  CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894

Query: 380  VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
              +  ++ GLCR G I+ A  + E++    I     +   ++    + G+ ++A  LLR 
Sbjct: 895  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954

Query: 440  MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            ML    +P  A+   L+   CK G   +A      +   G K +  S+ +L+  +C    
Sbjct: 955  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014

Query: 500  LLFAFELLDEL 510
            +  AFEL +E+
Sbjct: 1015 MALAFELYEEM 1025



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 8/315 (2%)

Query: 171  TCLNLLIE--SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            T  N+L+   S + D++ +FL Y +  L  + P+    + L+   C+   LE   ++LK 
Sbjct: 755  TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 814

Query: 228  MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
                 +      T++ LI   C NG    A +L + M S   I  D  T + ++    R 
Sbjct: 815  FICRGVEVDRY-TFNMLISKCCANGEINWAFDLVKVMTSLG-ISLDKDTCDAMVSVLNRN 872

Query: 288  GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
             +   ++ ++  M   G +P    Y  L+NG C+ G ++ A  V +EM    + P  +  
Sbjct: 873  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 348  TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            + ++    + G+ DEA  LL+ M +      I +F  ++   C+ G + EAL +   +  
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 408  DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR--LCKAGMA 465
             G+ L+  SY +++   C KG++  A EL   M   GFL + AT+ + L+R  L +    
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN-ATTYKALIRGLLARETAF 1051

Query: 466  EDAAIALFGLVEMGF 480
              A I L  L+  GF
Sbjct: 1052 SGADIILKDLLARGF 1066


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 215/434 (49%), Gaps = 17/434 (3%)

Query: 88  QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +KGF     T+  +L  L A  +  +A+D VLR+MT  +C         L+K   + +  
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174

Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH----LRLKP 200
           +  LE+ H +         P + + +T +N   +      A     YS  H     R+ P
Sbjct: 175 QEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKA-----YSTYHEMLDRRISP 229

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   ++ +I   CK   ++ A EVL  M K+ +  PN  TY++++ G C +G+ +EAI  
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV-MPNCRTYTSIMHGYCSSGQPKEAIGF 288

Query: 261 FEEM----VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
            +++    V  D + PD  TY  L+ G+   G +     +++ M  NG +P+ + Y  L+
Sbjct: 289 LKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILI 348

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
             + K+GK+ EA  VF +M+   L PD + Y  +I   C++GRV++A+   ++M + G  
Sbjct: 349 CAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 408

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
              + +N ++ GLC   K E A  ++ ++   GI LN   +  +++  C++G + ++ +L
Sbjct: 409 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 468

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             LM+  G  P   T + L+   C AG  ++A   L G+V +G KP + ++  L+   C+
Sbjct: 469 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCK 528

Query: 497 GRKLLFAFELLDEL 510
             ++  A  L  E+
Sbjct: 529 ISRMGDALVLFKEM 542



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 41/350 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+  ++NILI  + K+G ++ A  V  +M++  ++ P+ +TY  +I  LCK+GR  +A
Sbjct: 337 IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLN-PDAVTYGAVIGILCKSGRVEDA 395

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFC-----------------RG------------- 287
           +  FE+M+  + + P  + YN LI G C                 RG             
Sbjct: 396 MLYFEQMID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 454

Query: 288 -----GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
                G+V  ++K+ + M   G  P++  Y+TL++G+C  GK+ EA ++   M +  LKP
Sbjct: 455 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKP 514

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +T+ Y TLIN +C+  R+ +AL L KEM+  G   DI+T+NIIL GL +  +   A  + 
Sbjct: 515 NTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 574

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   G  +  ++Y I+L+  C+    + A+ + + +          T N ++  L K 
Sbjct: 575 VRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKV 634

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           G   +A          G  P   ++ L+ E I  G+ LL   E LD+L +
Sbjct: 635 GRNGEAKDLFVAFSSNGLVPNYWTYRLMAENII-GQGLL---EELDQLFL 680



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 168/339 (49%), Gaps = 6/339 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL----RLKPNTCIFNILIKHHCKRGTLE 219
           P+ +  ++ ++    S Q   A  FLK           L+P+   +  L++ +  +G L 
Sbjct: 264 PNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALV 323

Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
               +L  M ++ + +P+   Y+ LI    K G+  EA+ +F +M  +  + PDA+TY  
Sbjct: 324 GMHALLDLMVRNGI-HPDHYVYNILICAYAKQGKVDEAMLVFSKM-RQQGLNPDAVTYGA 381

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           +I   C+ G+V+ A    E M + G +P    Y +L++G C   K + A+E+  EM +  
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           +  +TI + ++I+  C+ GRV E+ +L   M   G K DI+T++ ++ G C  GK++EA+
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAM 501

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L  +   G+  N  +YR ++N  C+   +  A+ L + M   G  P   T N +L  L
Sbjct: 502 KLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGL 561

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +      A      + E G + E  ++ +++  +C+ +
Sbjct: 562 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 600



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 187/425 (44%), Gaps = 48/425 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F+ +  Q+G N +  TY  ++  L +  + E       QM  E       ++ +L+
Sbjct: 360 AMLVFSKM-RQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 418

Query: 138 KHFSNCSLHER----VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
                C+  ER    +LEM  +                CLN                   
Sbjct: 419 HGLCTCNKWERAEELILEMLDR--------------GICLN------------------- 445

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
                   T  FN +I  HCK G +  + ++   M +  +  P++ITYSTLIDG C  G+
Sbjct: 446 --------TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK-PDIITYSTLIDGYCLAGK 496

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA++L   MVS   + P+ +TY  LI+G+C+  ++  A  + + M+++G +P++  Y 
Sbjct: 497 MDEAMKLLSGMVSVG-LKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYN 555

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++ G  +  +   AKE++  +     + +   Y  +++  C+    D+AL + + +   
Sbjct: 556 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLM 615

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
             K +  TFNI++  L + G+  EA  +      +G+  N  +YR++      +G LE+ 
Sbjct: 616 DLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 675

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
            +L   M   G        N ++  L + G    A   L  + E  F  E+ + +L ++L
Sbjct: 676 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDL 735

Query: 494 ICRGR 498
           +  G+
Sbjct: 736 LSGGK 740



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 132/324 (40%), Gaps = 83/324 (25%)

Query: 269 QILPDALTYNVLIDGFCRGGKVD--------------------------------RAKKI 296
           ++ P   TY +LI   CR  ++D                                R    
Sbjct: 82  KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 297 MEF----MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV--------------------- 331
           M+     M    C P+VF+ T L+ G C E + QEA E+                     
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTT 201

Query: 332 -----------------FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
                            + EM +  + PD + Y+++I   C+   +D+A+E+L  M + G
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK-----ASYRIVLNFSCQKGE 429
              +  T+  I+ G C  G+ +EA+G L+K+  DG+  +      A+Y  +L     KG 
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           L     LL LM+  G  P +   N L+    K G  ++A +    + + G  P++ ++  
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381

Query: 490 LVELICR-GR---KLLFAFELLDE 509
           ++ ++C+ GR    +L+  +++DE
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDE 405



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 4/176 (2%)

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P    Y  LI C CRA R+D     L  + ++G + + +TF  +L GLC + +  +A+
Sbjct: 83  VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 400 GM-LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML---CRGFLPHYATSNEL 455
            + L ++       +  S  I+L   C +   ++A+EL  +M      G  P   +   +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +    K G +  A      +++    P+  +++ ++  +C+G+ +  A E+L  +V
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMV 258


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 222/487 (45%), Gaps = 42/487 (8%)

Query: 65  AISLIKCEKEPQCALEIFN-TVSEQKG---FNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           A S   C   P  A+ +FN   S  +G    +  + TYA ++D   R  + E   A   Q
Sbjct: 77  APSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQ 136

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           +     +    I  +L+K F      +  L++     P     P + + S  L  L +  
Sbjct: 137 LLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196

Query: 181 QVDLAQNFLKYSNQHLRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +   A + L+   +   +  P+   +N +I    K G +  A ++ KEM +  +  P+ +
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP-PDFV 255

Query: 240 TYSTLIDGLCK-----------------------------------NGRFREAIELFEEM 264
           TYS+++  LCK                                    G+++EA+ +F+EM
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  ILPD +T+N+L+   C+ GK+  A+ + + M   G NP+VF+Y  ++NG+  +G 
Sbjct: 316 -RRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 374

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +  ++FD M    + P    +  LI  +   G +D+A+ +  EM++ G K +++T+  
Sbjct: 375 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTT 434

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR GK+++A+    ++   G+  +K +Y  ++   C  G L KA EL+  ++  G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                   + ++  LCK G   DA       V +G  P +  +++L++  C   K+  A 
Sbjct: 495 MHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKAL 554

Query: 505 ELLDELV 511
            + D +V
Sbjct: 555 RVFDAMV 561



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 214/475 (45%), Gaps = 76/475 (16%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY++++  L + +  +  +A LRQM  +    +   + NL+  +S+    +
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWK 306

Query: 148 RVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNF-----LKYSNQHL---- 196
             + +F ++    R+   P +   +  +  L +  ++  A++      +K  N  +    
Sbjct: 307 EAVRVFKEMR---RQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363

Query: 197 -------------------------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     + P  C FN+LIK +   G L+ A  +  EM+  
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 423

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  PN++TY+T+I  LC+ G+  +A+E F +M+ +  + PD   Y+ LI GFC  G + 
Sbjct: 424 GVK-PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLL 481

Query: 292 RAKKIMEFMKNNG-----------------------------------CNPNVFNYTTLM 316
           +AK+++  + NNG                                    +P    Y+ LM
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+C  GK+++A  VFD M +  ++P+ + Y TL+N +C+ GR+DE L L +EM ++G K
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
              + +NII+ GL   G+   A     ++   GI +NK +Y IVL    +    ++AI L
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 661

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            + +          T N ++  + +    E+A      +   G  P   ++++++
Sbjct: 662 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 36/363 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P     S+ ++ L ++  +D A+ FL+       L PN   +N LI  +   G  + A  
Sbjct: 252 PDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL-PNNWTYNNLIYGYSSTGQWKEAVR 310

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK---------------- 267
           V KEM++ Q   P+++T++ L+  LCK G+ +EA ++F+ M  K                
Sbjct: 311 VFKEMRR-QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 369

Query: 268 ------------------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
                             D I P   T+NVLI  +   G +D+A  I   M+++G  PNV
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNV 429

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             YTT++   C+ GK+ +A E F++M +  + PD   Y  LI  FC  G + +A EL+ E
Sbjct: 430 LTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISE 489

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           +   G   DIV F+ I+  LC+ G++ +A  + +     G++     Y ++++  C  G+
Sbjct: 490 IMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +EKA+ +   M+  G  P+      L+   CK G  ++       +++ G KP +  + +
Sbjct: 550 MEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 609

Query: 490 LVE 492
           +++
Sbjct: 610 IID 612



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 213/410 (51%), Gaps = 11/410 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+T++  KG N +  +Y  +L+  A       +  +   M  +        F  L+
Sbjct: 343 ARDVFDTMA-MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 401

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQ 194
           K ++NC + ++ + +F+++  H +   KP++   +T +  L    ++D A + F +  +Q
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGV---KPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQ 458

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            +   P+   ++ LI+  C  G+L  A E++ E+  + M + +++ +S++I+ LCK GR 
Sbjct: 459 GV--APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM-HLDIVLFSSIINNLCKLGRV 515

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  +F+  V+   + P A+ Y++L+DG+C  GK+++A ++ + M + G  PN   Y T
Sbjct: 516 MDAQNIFDLTVNVG-LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G++ E   +F EM    +KP TI Y  +I+    AGR   A     EM E G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +  T++I+L GL +    +EA+ + ++L    + ++  +   ++    Q   +E+A 
Sbjct: 635 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 694

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +L   +   G +P   T + ++  L K G+ E+A      +   G +P+S
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 169/397 (42%), Gaps = 44/397 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IFN + +  G   N  TY T++  L R  K +       QM  +     +  +  L+
Sbjct: 413 AMIIFNEMRDH-GVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQH 195
           + F  C+ H  +L+    I  I      L  +  S+ +N L +  +V  AQN    +  +
Sbjct: 472 QGF--CT-HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLT-VN 527

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P   ++++L+  +C  G +E A  V   M  + +  PN + Y TL++G CK GR  
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE-PNDVVYGTLVNGYCKIGRID 586

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT-- 313
           E + LF EM+ K  I P  + YN++IDG    G+   AK     M  +G   N   Y+  
Sbjct: 587 EGLSLFREMLQKG-IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645

Query: 314 ---------------------------------TLMNGFCKEGKLQEAKEVFDEMKNFLL 340
                                            T++ G  +  +++EAK++F  +    L
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P  + Y+ +I    + G V+EA ++   M+  GC+ D    N ++  L ++ +I  A  
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 765

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            L K+      L   +  ++++    KG   + I  L
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF    S+ Q    + P + TY +L+D   R  + + A      +   G   ++   
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 149

Query: 313 TTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             L+ GFC+  +  EA ++           PD   Y+ L+   C  G+  +A +LL+ M 
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 372 ERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           E G  C  D+V +N ++ G  +EG + +A  + +++   GI  +  +Y  V++  C+   
Sbjct: 210 EGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           ++KA   LR M+ +G LP+  T N L+      G  ++A      +      P+  ++ +
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNM 329

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A ++ D + +K
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMK 353


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P    FN L+  + + G L+  F +   M+ S +  P++ TYS LI+GLCK  +   A
Sbjct: 167 LRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQ-PDVYTYSVLINGLCKESKMDYA 225

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF EM+  + ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL+ 
Sbjct: 226 NELFNEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A+++ DEM    LKPD + YTTLI+  C+ G ++ A E  K M +   + 
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRL 344

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+     +Y +++N  C+KG++    +L+
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 404

Query: 438 RLMLCRGFLPHYAT 451
           + M   G++P   T
Sbjct: 405 KEMQRDGYVPSVVT 418



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 163/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  + A  +F+  ++K  + P A+++N L++G+ R G +D 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDA-ITKWGLRPTAVSFNTLMNGYIRLGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+  A E+F+EM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ SC++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +L+ E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEM 407



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 155/305 (50%), Gaps = 19/305 (6%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         L   
Sbjct: 45  QGSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYR--------LTKE 94

Query: 275 LTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCNPNVFNYTTLMNGFCKEGKLQ 326
             + V  D  CR       K+   K +  F +++   G   +++ +  LM+ FCKEG+++
Sbjct: 95  HKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIK 153

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+ VFD +  + L+P  + + TL+N + R G +DE   L   M+  G + D+ T+++++
Sbjct: 154 LAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLI 213

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+E K++ A  +  ++  +G+  N  ++  +++  C+ G ++ A+E+ + ML +   
Sbjct: 214 NGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T N L+  LCK G  + A   +  +   G KP+  ++  L++  C+   L  AFE 
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEY 333

Query: 507 LDELV 511
              ++
Sbjct: 334 RKRMI 338


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 197/383 (51%), Gaps = 7/383 (1%)

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           G+F  L     +  + E  ++ F K+    R  P  ++ +  L+   +  + D  + F K
Sbjct: 26  GVFDALFSVLIDLGMVEEAIQCFSKMKRF-RVFPKTRSCNGLLHKFAKLGKTDGVKRFFK 84

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
                   KP    +NI+I   CK G +E+A  + +EMK   +  P+ +TY+++IDG  K
Sbjct: 85  -DMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL-IPDTVTYNSMIDGFGK 142

Query: 251 NGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
            GR  + +  FEEM  KD    PD +TYN LI+ FC+ GK+ +  +    MK NG  PNV
Sbjct: 143 VGRLDDTVCFFEEM--KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
            +Y+TL++ FCKEG +Q+A + + +M+   L P+   YT+LI+ +C+ G + +A  L  E
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANE 260

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M + G + ++VT+  ++ GLC      E L +L+++    I +   ++ ++++  C+   
Sbjct: 261 MLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKL 320

Query: 430 LEKAIELL-RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           + KAI+   R+    G   + A    ++  LCK    E A      + + G  P+  ++ 
Sbjct: 321 VSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYT 380

Query: 489 LLVELICRGRKLLFAFELLDELV 511
            L++   +   +L A  L D++V
Sbjct: 381 SLMDGNFKQGNVLEALALRDKMV 403



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 2/299 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P   +F+ L       G +E A +   +MK+ ++ +P   + + L+    K G+      
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRV-FPKTRSCNGLLHKFAKLGKTDGVKR 81

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F++M+      P   TYN++ID  C+ G V+ A+ + E MK  G  P+   Y ++++GF
Sbjct: 82  FFKDMIGAGA-KPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K G+L +    F+EMK+   +PD I Y  LINCFC+ G++ + LE  +EMK  G K ++
Sbjct: 141 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V+++ ++   C+EG +++A+     +   G+  N+ +Y  +++  C+ G L  A  L   
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANE 260

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           ML  G   +  T   L+  LC      +    L  +VE+  K    ++ +L++ +C+ +
Sbjct: 261 MLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNK 319



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 144/276 (52%), Gaps = 1/276 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    +  L   L   G   EAI+ F +M  + ++ P   + N L+  F + GK D  K+
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKM-KRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 81

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
             + M   G  P VF Y  +++  CKEG ++ A+ +F+EMK   L PDT+ Y ++I+ F 
Sbjct: 82  FFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFG 141

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + GR+D+ +   +EMK+  C+ D++T+N ++   C+ GK+ + L    ++  +G+  N  
Sbjct: 142 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVV 201

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           SY  +++  C++G +++AI+    M   G +P+  T   L+   CK G   DA      +
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +++G +    ++  L++ +C          LLDE+V
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMV 297



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 172/354 (48%), Gaps = 5/354 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  TY +++D   +  + +       +M    C+     +  L+  F       +
Sbjct: 124 RGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPK 183

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
            LE F ++      KP++ + ST ++   +   +  A  F     + + L PN   +  L
Sbjct: 184 GLEFFREMKR-NGLKPNVVSYSTLVDAFCKEGMMQQAIKFY-VDMRRVGLVPNEYTYTSL 241

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I  +CK G L  AF +  EM +  + + N++TY+ LIDGLC      E + L +EMV  D
Sbjct: 242 IDAYCKIGNLSDAFRLANEMLQVGVEW-NVVTYTALIDGLCGWENPTEGLHLLDEMVELD 300

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQE 327
            I    +T+ VLIDG C+   V +A      + N+ G   N   YT +++G CK  +++ 
Sbjct: 301 -IKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEA 359

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F++M    L PD   YT+L++   + G V EAL L  +M E G K D++ +  ++ 
Sbjct: 360 ATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVW 419

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           GL    ++++A   LE++  +GI+ ++     VL    + G + +A+EL   ++
Sbjct: 420 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLM 473



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 38/285 (13%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N LI   CK G L    E  +EMK++ +  PN+++YSTL+D  CK G  ++AI
Sbjct: 162 EPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLK-PNVVSYSTLVDAFCKEGMMQQAI 220

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           + + +M  +  ++P+  TY  LID +C+ G +  A ++   M   G   NV  YT L++G
Sbjct: 221 KFYVDM-RRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDG 279

Query: 319 FCKEGKLQEAKEVFDEM------------------------------------KNFLLKP 342
            C      E   + DEM                                     +F L+ 
Sbjct: 280 LCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQA 339

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           +   YT +I+  C+  +V+ A  L ++M ++G   D   +  ++ G  ++G + EAL + 
Sbjct: 340 NAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 399

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           +K+   G+ L+  +Y  ++       +L+KA   L  M+  G  P
Sbjct: 400 DKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 444


>gi|326525168|dbj|BAK07854.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 217/444 (48%), Gaps = 29/444 (6%)

Query: 68  LIKCEKEPQCALEIFN-------TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           L++ E++P+ AL +F+       + S       +  T + +  +LA         ++L +
Sbjct: 43  LVRGERDPRRALALFDAATAAPVSTSVPTQILPSPDTVSLLTSRLASAGLLPLATSLLSR 102

Query: 121 --MTYETCKFHEGIFLNLMKHFSNCSLHERV--LEMFHKIHPITREKPSLKAISTCLNLL 176
               + +    E  FL L++ F  C  H  +  L++F           S ++ +  L  L
Sbjct: 103 SRALFPSNADLEPPFLTLLRAF--CRTHRPLDALQLFRSAPSALSLPHSARSYTAVLAGL 160

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT--LESAFEVLKEMKKSQMS 234
           +  + + LA + L    +     P T  +N+L+K HC      ++ A  + + + K    
Sbjct: 161 VAHSHLPLAHSLLA-DMRASGFGPTTATYNVLLKAHCSDAAAHIDDAVRLFRNIPK---- 215

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            P+  +Y+TLIDGLC+  R  EA ELF EMV ++ I P  +TY  +I+   R G +D A 
Sbjct: 216 -PDACSYNTLIDGLCRRSRRVEAQELFSEMV-ENGIAPTVVTYTTIINWLAREGCLDDAL 273

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           ++ + M   G  PNV  Y++L++G CK G+   A ++ + +   +  P+TI Y+++IN  
Sbjct: 274 EMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLERLAKEVKLPNTIIYSSVINGL 333

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G + EA+E+L  M+ +G K D   F  ++ GLC  G+  EA   L+++   G+  N+
Sbjct: 334 CKEGLLREAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGVQPNR 393

Query: 415 ASYRI-------VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            ++ +       V+   C KGE+ +A ++ + M  RG     +T + L+    K    E 
Sbjct: 394 VTWSLHVRINVAVVTALCVKGEVGRAFQVYQSMRTRGISTEPSTFHLLVEFFSKKNHLEK 453

Query: 468 AAIALFGLVEMGFKPESDSWALLV 491
           AA  +  ++     PE ++W ++V
Sbjct: 454 AAHVVLDMLSERCIPERETWDVIV 477



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 167/337 (49%), Gaps = 16/337 (4%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSN----QHLRLKPNTCIFNILIKHHCKRGTLE 219
           PS   +S   + L  +  + LA + L  S      +  L+P    F  L++  C+     
Sbjct: 75  PSPDTVSLLTSRLASAGLLPLATSLLSRSRALFPSNADLEPP---FLTLLRAFCRTHRPL 131

Query: 220 SAFEVLKEMKKSQMSYPNLI-TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A ++ +    S +S P+   +Y+ ++ GL  +     A  L  +M +     P   TYN
Sbjct: 132 DALQLFRS-APSALSLPHSARSYTAVLAGLVAHSHLPLAHSLLADMRASG-FGPTTATYN 189

Query: 279 VLIDGFCR--GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           VL+   C      +D A ++      N   P+  +Y TL++G C+  +  EA+E+F EM 
Sbjct: 190 VLLKAHCSDAAAHIDDAVRLFR----NIPKPDACSYNTLIDGLCRRSRRVEAQELFSEMV 245

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              + P  + YTT+IN   R G +D+ALE+  EM  RG   ++VT++ ++ GLC+ G+  
Sbjct: 246 ENGIAPTVVTYTTIINWLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAA 305

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            AL +LE+L  +    N   Y  V+N  C++G L +A+E+L  M  +G  P      +L+
Sbjct: 306 SALDLLERLAKEVKLPNTIIYSSVINGLCKEGLLREAMEVLDRMRLQGRKPDAGLFGKLI 365

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           V LC AG A +AA  L  +V  G +P   +W+L V +
Sbjct: 366 VGLCDAGRAVEAANYLDEMVLAGVQPNRVTWSLHVRI 402



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 145/316 (45%), Gaps = 7/316 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL-ITYSTLIDGLCKNGRFREAI 258
           P+    ++L       G L  A  +L   +    S  +L   + TL+   C+  R  +A+
Sbjct: 75  PSPDTVSLLTSRLASAGLLPLATSLLSRSRALFPSNADLEPPFLTLLRAFCRTHRPLDAL 134

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF    S   +   A +Y  ++ G      +  A  ++  M+ +G  P    Y  L+  
Sbjct: 135 QLFRSAPSALSLPHSARSYTAVLAGLVAHSHLPLAHSLLADMRASGFGPTTATYNVLLKA 194

Query: 319 FCKEGKLQEAKEVFDEMKNF--LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            C +     A  + D ++ F  + KPD   Y TLI+  CR  R  EA EL  EM E G  
Sbjct: 195 HCSDA----AAHIDDAVRLFRNIPKPDACSYNTLIDGLCRRSRRVEAQELFSEMVENGIA 250

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             +VT+  I+  L REG +++AL M +++   GI  N  +Y  +++  C+ G    A++L
Sbjct: 251 PTVVTYTTIINWLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDL 310

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L  +     LP+    + ++  LCK G+  +A   L  +   G KP++  +  L+  +C 
Sbjct: 311 LERLAKEVKLPNTIIYSSVINGLCKEGLLREAMEVLDRMRLQGRKPDAGLFGKLIVGLCD 370

Query: 497 GRKLLFAFELLDELVI 512
             + + A   LDE+V+
Sbjct: 371 AGRAVEAANYLDEMVL 386


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 164/312 (52%), Gaps = 2/312 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +  L+   CK G   +A  +L+ M +     PN+I Y+T+ID LCK+ +  EA 
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN-CRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            LF EM++K  I PD  TYN LI   C   +      ++  M N+   PNV  ++T+++ 
Sbjct: 273 NLFSEMITKG-ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKEG +  A +V D M    ++PD + YT L++  C    +DEA+++   M  +GC  +
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + ++NI++ G C+  ++++A+G+LE++   G+  +  +Y  +++  C  G L+ AI L  
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G +P   T   LL  LCK     +A + L  +       +   + + ++ +CR  
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511

Query: 499 KLLFAFELLDEL 510
           +L  A +L   L
Sbjct: 512 ELEAARDLFSNL 523



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 165/313 (52%), Gaps = 4/313 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +P+   FN LI+  C  G +  A  +  +        P+++TY TL++GLCK G   
Sbjct: 176 LGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ-PDVVTYGTLMNGLCKVGNTS 234

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            AI L   MV K+   P+ + YN +ID  C+  +V  A  +   M   G +P++F Y +L
Sbjct: 235 AAIRLLRSMVQKN-CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSL 293

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++  C   + +    + +EM N  + P+ + ++T+++  C+ G +  A +++  M +RG 
Sbjct: 294 IHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 353

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + D+VT+  ++ G C   +++EA+ + + + + G   N  SY I++N  CQ   ++KA+ 
Sbjct: 354 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 413

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELI 494
           LL  M  +G +    T N L+  LC  G  +  AIALF  +V  G  P+  ++ +L++ +
Sbjct: 414 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH-AIALFHEMVASGQIPDLVTYRILLDYL 472

Query: 495 CRGRKLLFAFELL 507
           C+   L  A  LL
Sbjct: 473 CKNHHLAEAMVLL 485



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 181/370 (48%), Gaps = 44/370 (11%)

Query: 78  ALEIFN-TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL 136
           AL +F+ T+ E  GF  +  TY T+++ L +     A   +LR M  + C+         
Sbjct: 201 ALHLFDKTIGE--GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCR--------- 249

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
                                      P++ A +T ++ L +  QV  A N   +S    
Sbjct: 250 ---------------------------PNVIAYNTIIDSLCKDRQVTEAFNL--FSEMIT 280

Query: 197 R-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+   +N LI   C     +    +L EM  S++  PN++ +ST++D LCK G   
Sbjct: 281 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI-MPNVVVFSTVVDALCKEGMIA 339

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A ++ + M+ K  + PD +TY  L+DG C   ++D A K+ + M + GC PNV +Y  L
Sbjct: 340 IAHDVVDMMI-KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 398

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+C+  ++ +A  + ++M    L  DT+ Y TLI+  C  GR+  A+ L  EM   G 
Sbjct: 399 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 458

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VT+ I+L  LC+   + EA+ +L+ +    +  +   Y I ++  C+ GELE A +
Sbjct: 459 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD 518

Query: 436 LLRLMLCRGF 445
           L   + C+GF
Sbjct: 519 LFSNLSCQGF 528



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 147/297 (49%), Gaps = 2/297 (0%)

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           TL+ A      M       P+ + ++ L+  + K   +   + L  +M S   I PD  T
Sbjct: 92  TLDDALSSFNRMLHMH-PPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFG-IPPDVYT 149

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
            N+LI+ FC   ++  A  ++  +   GC P+   + TL+ G C EGK+ EA  +FD+  
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +PD + Y TL+N  C+ G    A+ LL+ M ++ C+ +++ +N I+  LC++ ++ 
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  +  ++   GI  +  +Y  +++  C   E +    LL  M+    +P+    + ++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             LCK GM   A   +  +++ G +P+  ++  L++  C   ++  A ++ D +V K
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 386



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 146/319 (45%), Gaps = 2/319 (0%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H+   P+T  F  L+    K     +   +  +M    +  P++ T + LI+  C   R 
Sbjct: 105 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIP-PDVYTLNILINSFCHLRRL 163

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
             A  +  +++ K    PD  T+N LI G C  GK+  A  + +     G  P+V  Y T
Sbjct: 164 GYAFSVLAKLL-KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGT 222

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           LMNG CK G    A  +   M     +P+ I Y T+I+  C+  +V EA  L  EM  +G
Sbjct: 223 LMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKG 282

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              DI T+N ++  LC   + +    +L ++    I  N   +  V++  C++G +  A 
Sbjct: 283 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 342

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           +++ +M+ RG  P   T   L+   C     ++A      +V  G  P   S+ +L+   
Sbjct: 343 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 402

Query: 495 CRGRKLLFAFELLDELVIK 513
           C+ +++  A  LL+++ ++
Sbjct: 403 CQIQRMDKAMGLLEQMSLQ 421


>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
 gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
           function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
           thaliana]
 gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
 gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
 gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 181/355 (50%), Gaps = 11/355 (3%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQ-NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           E P   A+ +CL        +D+++ N L      ++++P+     ILI   CK   ++ 
Sbjct: 293 EAPPFNALLSCL-----GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE 347

Query: 221 AFEVLKEMKKSQMSYPNLIT-----YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           A EV ++M+  +    N+I      ++TLIDGLCK GR +EA EL   M  +++ +P+A+
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYN LIDG+CR GK++ AK+++  MK +   PNV    T++ G C+   L  A   F +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +   +K + + Y TLI+  C    V++A+   ++M E GC  D   +  ++ GLC+  + 
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            +A+ ++EKL   G  L+  +Y +++   C K   EK  E+L  M   G  P   T N L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +    K    E     +  + E G  P   ++  +++  C   +L  A +L  ++
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N+LI   C +   E  +E+L +M+K +   P+ ITY+TLI    K+  F E++E   E 
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEK-EGKKPDSITYNTLISFFGKHKDF-ESVERMMEQ 606

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK-NNGCNPNVFNYTTLMNGFCKEG 323
           + +D + P   TY  +ID +C  G++D A K+ + M  ++  NPN   Y  L+N F K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
              +A  + +EMK  +++P+   Y  L  C     + +  L+L+ EM E+ C+ + +T  
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726

Query: 384 IIL 386
           I++
Sbjct: 727 ILM 729



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 131/255 (51%), Gaps = 12/255 (4%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  I+  LI   C+      A  V++++K+   S  +L+ Y+ LI   C      +  E
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL-DLLAYNMLIGLFCDKNNAEKVYE 567

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  +M  K+   PD++TYN LI  F +    +  +++ME M+ +G +P V  Y  +++ +
Sbjct: 568 MLTDM-EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626

Query: 320 CKEGKLQEAKEVFDEMK-NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           C  G+L EA ++F +M  +  + P+T+ Y  LIN F + G   +AL L +EMK +  + +
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + T+N +   L  + + E  L +++++       N+ +  I++        L  + EL++
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME------RLSGSDELVK 740

Query: 439 LMLCRGFLPHYATSN 453
           L   R F+  Y+ ++
Sbjct: 741 L---RKFMQGYSVAS 752



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 17/286 (5%)

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-DALTYNVLIDGFCR 286
           MK SQ+        + ++D L +NG   +A ++ +EM+ K+ + P + +T ++++    +
Sbjct: 182 MKNSQVR-------NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK 234

Query: 287 GGKVDRAKKI--MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
              +   K I  +    ++G +PN    T  ++  CK  +   A ++  ++       + 
Sbjct: 235 ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEA 294

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             +  L++C  R   +    +L+ +M E   + D+VT  I++  LC+  +++EAL + E+
Sbjct: 295 PPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ 354

Query: 405 L----WYDG--IYLNKASYRIVLNFSCQKGELEKAIELL-RLMLCRGFLPHYATSNELLV 457
           +      DG  I  +   +  +++  C+ G L++A ELL R+ L    +P+  T N L+ 
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             C+AG  E A   +  + E   KP   +   +V  +CR   L  A
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 4/173 (2%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP++  +N LI    K    ES   ++++M++  +  P + TY  +ID  C  G   EA+
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD-PTVTTYGAVIDAYCSVGELDEAL 636

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF++M    ++ P+ + YN+LI+ F + G   +A  + E MK     PNV  Y  L   
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             ++ + +   ++ DEM     +P+ I    L+    R    DE ++L K M+
Sbjct: 697 LNEKTQGETLLKLMDEMVEQSCEPNQITMEILME---RLSGSDELVKLRKFMQ 746



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/352 (20%), Positives = 140/352 (39%), Gaps = 84/352 (23%)

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
           L E+ K +     ++    LI    + G   +++ ++E +   D  + ++   NV++D  
Sbjct: 139 LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL---DSNMKNSQVRNVVVDVL 195

Query: 285 CRGGKVDRAKKIMEFM---------------------------------------KNNGC 305
            R G VD A K+++ M                                        ++G 
Sbjct: 196 LRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGV 255

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVF-DEMKN--------------------------- 337
           +PN    T  ++  CK  +   A ++  D MKN                           
Sbjct: 256 SPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMND 315

Query: 338 -------FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC------KADIVTFNI 384
                    ++PD +    LIN  C++ RVDEALE+ ++M+ +        KAD + FN 
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375

Query: 385 ILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           ++ GLC+ G+++EA  +L ++   +    N  +Y  +++  C+ G+LE A E++  M   
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
              P+  T N ++  +C+      A +    + + G K    ++  L+   C
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 38/215 (17%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           T  E++G   ++ TY T++    ++K FE+V+ ++ QM        +G+           
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR------EDGL----------- 612

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
                               P++      ++      ++D A    K    H ++ PNT 
Sbjct: 613 -------------------DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           I+NILI    K G    A   LKE  K +M  PN+ TY+ L   L +  +    ++L +E
Sbjct: 654 IYNILINAFSKLGNFGQALS-LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           MV +    P+ +T  +L++      ++ + +K M+
Sbjct: 713 MVEQ-SCEPNQITMEILMERLSGSDELVKLRKFMQ 746


>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 521

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 216/449 (48%), Gaps = 31/449 (6%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           L+K + +   +L+ FN V      +H   T++ +L  L + + F+   ++  ++      
Sbjct: 75  LLKLQNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKTAQSIFSKIIT---- 130

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV-DLAQ 186
                        +N +L E +L      H  T    S     T        N++ +   
Sbjct: 131 -------------TNSNLFESLL------HSYTLCNSSPLVFDTLFKTFAHMNKLRNATD 171

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            F+K           +C   +    + KR  L  +F   ++M+++++S PN+ T + ++ 
Sbjct: 172 TFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSF--YRQMRRNRIS-PNVYTINMVVS 228

Query: 247 GLCKNGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKN-NG 304
             CK G   +A E+ E+M  KD  L P+ +T+N LI G+C  G +  A K+ + M   NG
Sbjct: 229 AYCKLGELNKASEVLEKM--KDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNG 286

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             PNV  + TL+NGFCKEGKL EA  VF EMK   + P+ + Y TLIN F +AG  +  +
Sbjct: 287 VFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGI 346

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L +EM+    KADI+T+N ++ GLC+EGK ++A  M+++L    +  N +++  ++   
Sbjct: 347 GLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQ 406

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C +   E+A  + R M+  GF P+  T   L    CK    + A   L  ++E    P+S
Sbjct: 407 CVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDS 466

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIK 513
              + +   +CR  +  FA  L  E+  K
Sbjct: 467 SILSEVYSGLCRCGRKQFALMLCSEIEAK 495


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 217/447 (48%), Gaps = 29/447 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G +    T+  ++  L      +    +  +M  + C+ +E  F  L++ +       + 
Sbjct: 51  GVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKG 110

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           LE+  ++  +    P+    +T ++   +  + D A+  +    +   L P+   FN  I
Sbjct: 111 LELLGEMRRLGFS-PNKVVYNTLISSFCKEGKTDDAEKLVDEMRKD-GLSPDVVTFNARI 168

Query: 210 KHHCKRGTLESAFEVLKEMKKSQ---MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
              C  G +  A  + ++M+  +   +  PN+ITY+ ++ G CK G   EA  LFE+M  
Sbjct: 169 SALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKV 228

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            + ++ +  +YN+ + G  R GK+  A+ +++ M + G  PNV++Y  +M+G CK G L 
Sbjct: 229 SENLM-NRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLF 287

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A+ +   M +  + PDT+ YTTL++ +C  G+V EA  +L+EM   GC  +  T NI+L
Sbjct: 288 DARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILL 347

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF- 445
             L +EG+I EA  +L+K+   G  ++  +  IV++  C  G+L+KAIE++  M   G  
Sbjct: 348 YSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSA 407

Query: 446 ----------------------LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
                                 +P   + + ++  LCKAG   +A      ++    +P+
Sbjct: 408 ALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPD 467

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
           S  + + +   C+  K+  AF +L ++
Sbjct: 468 SAIYDVFIHSFCKEGKISSAFRVLKDM 494



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 176/316 (55%), Gaps = 6/316 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  ++N+L++   K G ++    + K+M  S +S P   T++ LI  LC +G   +A E
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVS-PETYTFNVLIGLLCDSGCLDDARE 77

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF++M  K    P+  ++ +L+ G+CR G   +  +++  M+  G +PN   Y TL++ F
Sbjct: 78  LFDKMPEK-GCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSF 136

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC---- 375
           CKEGK  +A+++ DEM+   L PD + +   I+  C +G+V EA  + ++M+        
Sbjct: 137 CKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLP 196

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + +I+T+N++LGG C+EG +EEA  + EK+      +N+ SY I L    + G+L +A  
Sbjct: 197 QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL 256

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +L+ M+  G  P+  + N ++  LCK G+  DA + +  +   G  P++ ++  L+   C
Sbjct: 257 VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYC 316

Query: 496 RGRKLLFAFELLDELV 511
              K+  A  +L E++
Sbjct: 317 HTGKVSEANNVLREMM 332



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 157/286 (54%), Gaps = 25/286 (8%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  +  L+  +C  G +  A  VL+EM +   S PN  T + L+  L K GR  EA E
Sbjct: 303 PDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCS-PNNYTCNILLYSLWKEGRISEAEE 361

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--------------- 304
           L ++M  K  ++ D +T N++IDG C  GK+D+A +I+  M  +G               
Sbjct: 362 LLQKMNEKGYVI-DTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLV 420

Query: 305 --------CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
                   C P++ +Y+T+++G CK G++ EAK+ F EM    L+PD+  Y   I+ FC+
Sbjct: 421 DDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCK 480

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++  A  +LK+M+++GC   + T+N ++ GL  + +I E  G+++++   G+  + + 
Sbjct: 481 EGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSI 540

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           Y  VL+  C+ G ++ A  +L  ML +G  P+ ++ + L+   CKA
Sbjct: 541 YNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKA 586



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 157/352 (44%), Gaps = 64/352 (18%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +NI +    + G L  A  VLKEM    M  PN+ +Y+ ++DGLCKNG   +A  L   M
Sbjct: 238 YNIWLLGLVRIGKLLEAQLVLKEMVDMGME-PNVYSYNIVMDGLCKNGVLFDARMLMRLM 296

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT----------- 313
            S   +LPD +TY  L+ G+C  GKV  A  ++  M  +GC+PN  NYT           
Sbjct: 297 TSS-GVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPN--NYTCNILLYSLWKE 353

Query: 314 --------------------------TLMNGFCKEGKLQEAKEVFDEM-----------K 336
                                      +++G C  GKL +A E+ + M            
Sbjct: 354 GRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLG 413

Query: 337 NFLLK------------PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           N  +             PD I Y+T+I+  C+AGRV EA +   EM  +  + D   +++
Sbjct: 414 NSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDV 473

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            +   C+EGKI  A  +L+ +   G      +Y  ++     K ++ +   L+  M  RG
Sbjct: 474 FIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERG 533

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             P  +  N +L  LC+ G  +DA   L  +++ G  P   S+++L++  C+
Sbjct: 534 VSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCK 585



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 144/279 (51%), Gaps = 6/279 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P L + ST ++ L ++ +V  A+  F++   ++L+  P++ I+++ I   CK G + SAF
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQ--PDSAIYDVFIHSFCKEGKISSAF 488

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            VLK+M+K   +   L TY++LI GL    +  E   L +EM  +  + PD   YN ++ 
Sbjct: 489 RVLKDMEKKGCN-KTLQTYNSLIMGLGSKNQIFEIYGLIDEMRER-GVSPDVSIYNNVLS 546

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C GG+V  A  +++ M   G +PN+ +++ L+  FCK        E+F+   N     
Sbjct: 547 SLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHK 606

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y+   N     G V +A EL +   +R        +  ++  LC++ K+++A G+L
Sbjct: 607 EAL-YSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGIL 665

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
            KL   G + + AS+  V++   ++G   +A EL   M+
Sbjct: 666 HKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMM 704



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 187/437 (42%), Gaps = 63/437 (14%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  +Y  ++D L +         ++R MT          +  L+  + +     +V
Sbjct: 265 GMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTG---KV 321

Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            E  + +  + R+   P+    +  L  L +  ++  A+  L+  N+   +  +T   NI
Sbjct: 322 SEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV-IDTVTCNI 380

Query: 208 LIKHHCKRGTLESAFEVLKEM----------------------KKSQMSYPNLITYSTLI 245
           +I   C  G L+ A E++  M                         +   P+LI+YST+I
Sbjct: 381 VIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTII 440

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
            GLCK GR  EA + F EM+ K+ + PD+  Y+V I  FC+ GK+  A ++++ M+  GC
Sbjct: 441 SGLCKAGRVGEAKKKFIEMMGKN-LQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGC 499

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
           N  +  Y +L+ G   + ++ E   + DEM+   + PD   Y  +++  C  GRV +A  
Sbjct: 500 NKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPS 559

Query: 366 LLKEMKERGCKADIVTFNIILGGLCRE--------------------------------- 392
           +L EM ++G   +I +F+I++   C+                                  
Sbjct: 560 VLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLV 619

Query: 393 -GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G++ +A  + E        +    Y+ +++  C+  +L+ A  +L  ++ +G+    A+
Sbjct: 620 GGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPAS 679

Query: 452 SNELLVRLCKAGMAEDA 468
              ++  L K G   +A
Sbjct: 680 FMPVIDGLGKRGNKHEA 696



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%)

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P    Y  L+    + GRVD    L K+M   G   +  TFN+++G LC  G +++A  +
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            +K+   G   N+ S+ I++   C+ G   K +ELL  M   GF P+    N L+   CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            G  +DA   +  + + G  P+  ++   +  +C   K+L A  +  ++ I E
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 211/423 (49%), Gaps = 5/423 (1%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           ++ +L  +A+  K+EAV ++ R +           F  L+  F  C+     L    K+ 
Sbjct: 82  FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +  E PS+    + +N     N+   A + +      L  +PN  I+N +I   C++G 
Sbjct: 142 KLGFE-PSIVTFGSLVNGFCHVNRFYEAMSLVD-QIVGLGYEPNVVIYNTIIDSLCEKGQ 199

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           + +A +VLK MKK  +  P+++TY++LI  L  +G +  +  +  +M+ +  I PD +T+
Sbjct: 200 VNTALDVLKHMKKMGIR-PDVVTYNSLITRLFHSGTWGVSARILSDMM-RMGISPDVITF 257

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           + LID + + G++  AKK    M     NPN+  Y +L+NG C  G L EAK+V + + +
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               P+ + Y TLIN +C+A RVD+ +++L  M   G   D  T+N +  G C+ GK   
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L ++   G++ +  ++ I+L+  C  G++ KA+  L  +     +    T N ++ 
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
            LCKA   EDA      L   G  P+  ++  ++  + R R    A EL  ++  KE G 
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ-KEDGL 496

Query: 518 IQV 520
           + +
Sbjct: 497 MPI 499



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 193/382 (50%), Gaps = 4/382 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G +H+  ++ T++D   R  +     + L +M     +     F +L+  F + +  
Sbjct: 106 EMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRF 165

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              + +  +I  +  E P++   +T ++ L E  QV+ A + LK+  + + ++P+   +N
Sbjct: 166 YEAMSLVDQIVGLGYE-PNVVIYNTIIDSLCEKGQVNTALDVLKHMKK-MGIRPDVVTYN 223

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI      GT   +  +L +M +  +S P++IT+S LID   K G+  EA + + EM+ 
Sbjct: 224 SLITRLFHSGTWGVSARILSDMMRMGIS-PDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  + P+ +TYN LI+G C  G +D AKK++  + + G  PN   Y TL+NG+CK  ++ 
Sbjct: 283 R-SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +  ++   M    +  DT  Y TL   +C+AG+   A ++L  M   G   D+ TFNI+L
Sbjct: 342 DGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC  GKI +AL  LE L      +   +Y I++   C+  ++E A  L   +  +G  
Sbjct: 402 DGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461

Query: 447 PHYATSNELLVRLCKAGMAEDA 468
           P   T   +++ L +  +  +A
Sbjct: 462 PDVITYITMMIGLRRKRLWREA 483



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 173/354 (48%), Gaps = 7/354 (1%)

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
           HP+    PS+   S  L  + + N+ +   +  ++  + L +  +   F  LI   C+  
Sbjct: 74  HPL----PSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISHDLYSFTTLIDCFCRCA 128

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            L  A   L +M K     P+++T+ +L++G C   RF EA+ L +++V      P+ + 
Sbjct: 129 RLSLALSCLGKMMKLGFE-PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY-EPNVVI 186

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN +ID  C  G+V+ A  +++ MK  G  P+V  Y +L+      G    +  +  +M 
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              + PD I ++ LI+ + + G++ EA +   EM +R    +IVT+N ++ GLC  G ++
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  +L  L   G + N  +Y  ++N  C+   ++  +++L +M   G      T N L 
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              C+AG    A   L  +V  G  P+  ++ +L++ +C   K+  A   L++L
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 155/312 (49%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F+ L+    K    E+   + + ++   +S+ +L +++TLID  C+  R   A+ 
Sbjct: 77  PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISH-DLYSFTTLIDCFCRCARLSLALS 135

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              +M+ K    P  +T+  L++GFC   +   A  +++ +   G  PNV  Y T+++  
Sbjct: 136 CLGKMM-KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C++G++  A +V   MK   ++PD + Y +LI     +G    +  +L +M   G   D+
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +TF+ ++    +EG++ EA     ++    +  N  +Y  ++N  C  G L++A ++L +
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ++ +GF P+  T N L+   CKA   +D    L  +   G   ++ ++  L +  C+  K
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374

Query: 500 LLFAFELLDELV 511
              A ++L  +V
Sbjct: 375 FSAAEKVLGRMV 386



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 133/283 (46%), Gaps = 36/283 (12%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +F +A+ LF +M ++   LP  + ++ L+    +  K +    +   ++  G + +++++
Sbjct: 59  KFNDALTLFCDM-AESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSF 117

Query: 313 TTLM-----------------------------------NGFCKEGKLQEAKEVFDEMKN 337
           TTL+                                   NGFC   +  EA  + D++  
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +P+ + Y T+I+  C  G+V+ AL++LK MK+ G + D+VT+N ++  L   G    
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           +  +L  +   GI  +  ++  +++   ++G+L +A +    M+ R   P+  T N L+ 
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
            LC  G+ ++A   L  LV  GF P + ++  L+   C+ +++
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRV 340


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 159 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 217

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 218 NELFDEMLVKG-LIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIY 276

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD   YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 277 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 336

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++    +  +  +Y +++N  C+KG++ K  +LL
Sbjct: 337 DDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLL 396

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 397 KEMQRDGHAPSVVTYNVLM 415



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 123 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 181

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 182 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 241

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 242 GRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 301

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 302 DKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 361

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +  KP++ ++ +++   C+   +    +LL E+
Sbjct: 362 REMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 399



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 150/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 160 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 217

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E+++ M+S+  +LPD +TYN LI
Sbjct: 218 NELFDEMLVKGL-IPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQ-SLLPDLITYNTLI 275

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+ F YTTL++G CKEG L  A E    M    ++
Sbjct: 276 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 335

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM     K D  T+ +I+   C++G + +   +
Sbjct: 336 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKL 395

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 396 LKEMQRDGHAPSVVTYNVLMN 416



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI   CK G ++ 
Sbjct: 195 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLIPNGVTFTTLIDGRCKNGRVDL 251

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K M  SQ   P+LITY+TLI GLCK G  ++A +L +EM S   + PD  TY  L
Sbjct: 252 AMEIYKRML-SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMKGLKPDKFTYTTL 309

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 310 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDL 369

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPDT  YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 370 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 147/321 (45%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKD----------QIL-------PDALTYNV 279
            L +Y T+I  LC +    EA  L + +VS+            IL        D   ++ 
Sbjct: 4   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSG 63

Query: 280 LIDGFCRGG-------------------KVDRAKKIME-FMKNN---------------G 304
           LI  +   G                     D  +K++E  MK                 G
Sbjct: 64  LITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 123

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 124 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 183

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 184 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGR 243

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +  LP   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 244 CKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 303

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 304 FTYTTLIDGCCKEGDLDTAFE 324



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 37  KGSASAVFATILETKGTQRS--DIYVFSGLITAYLESGFXRDAIECYRLTREHKLWVPFD 94

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 95  TCRKVLEHLMKLKYFKLVWGF--------YEEILEC----GYPASLYFFNILMHRFCKDG 142

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 143 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 202

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 203 VLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQ 262

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G                                    L  A
Sbjct: 263 SLLPDLITYNTLIYGLCKKG-----------------------------------DLKQA 287

Query: 504 FELLDELVIK 513
            +L+DE+ +K
Sbjct: 288 HDLIDEMSMK 297


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 166/314 (52%), Gaps = 1/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +   I   CKR  ++ AF VL+EM    +  PN+ T++TLIDGLCK G    A  
Sbjct: 249 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK-PNVYTHTTLIDGLCKIGWTERAFR 307

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF +++      P+  TY V+I G+CR GK+ RA+ ++  M   G  PN   YTTL+ G 
Sbjct: 308 LFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGH 367

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G    A E+ ++MK     P+   Y  +I+ FC+ G++ EA ++L+    +G K D 
Sbjct: 368 CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDK 427

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+ I++   C++G I  AL + +++  +G   +  +Y  +++  CQ+ ++E++ +    
Sbjct: 428 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 487

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            L  G LP   T   ++   CK G +  A      +V+ G   +S ++  L+  +C+  +
Sbjct: 488 CLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESR 547

Query: 500 LLFAFELLDELVIK 513
           L  A  L + ++ K
Sbjct: 548 LEEAKALYEGMLDK 561



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 153/313 (48%), Gaps = 1/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN      LI   CK G  E AF +  ++ KS    PN+ TY+ +I G C+ G+   A
Sbjct: 282 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 341

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L   MV +  + P+  TY  LI G C+GG  DRA ++M  MK  G  PN++ Y  +++
Sbjct: 342 EMLLVRMVEQG-LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 400

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK+GK+QEA +V     +  LK D I YT LI   C+ G +  AL+L   M E GC  
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 460

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI  +  ++   C++ ++EE+    +K    G+   K +Y  ++   C+ G    A+ + 
Sbjct: 461 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 520

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G      T   L+  LCK    E+A     G+++    P   +   L    CR 
Sbjct: 521 ERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRR 580

Query: 498 RKLLFAFELLDEL 510
            K   A  +LD L
Sbjct: 581 EKTSIAVSVLDRL 593



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 185/384 (48%), Gaps = 40/384 (10%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQM----------------------TYETCK 127
           GF+ +NAT   ++  L    +F+ V    R+M                       Y    
Sbjct: 211 GFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQA 270

Query: 128 FH-------EGIFLNLMKHFS------NCSLHERVLEMFHKIHPITREKPSLKAISTCLN 174
           FH        G+  N+  H +           ER   +F K+   +  KP++   +  + 
Sbjct: 271 FHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIG 330

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
                 ++  A+  L    +   LKPNT  +  LI  HCK G+ + AFE++ +MK+    
Sbjct: 331 GYCREGKLARAEMLLVRMVEQ-GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGF- 388

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN+ TY+ +IDG CK G+ +EA ++   M +   +  D +TY +LI   C+ G +  A 
Sbjct: 389 LPNIYTYNAVIDGFCKKGKIQEAYKVL-RMATSQGLKFDKITYTILITEHCKQGHITYAL 447

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            + + M  NGC P++  YT+L++ +C++ +++E+++ FD+     L P    YT++I  +
Sbjct: 448 DLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGY 507

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ GR   AL + + M + GC AD +T+  ++ GLC+E ++EEA  + E +  D   +  
Sbjct: 508 CKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGML-DKRLVPC 566

Query: 415 ASYRIVLNFS-CQKGELEKAIELL 437
              R+ L F  C++ +   A+ +L
Sbjct: 567 EVTRVTLTFEYCRREKTSIAVSVL 590



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 170/419 (40%), Gaps = 81/419 (19%)

Query: 82  FNTVSE------QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           F  VSE      + G   N   Y   +D L + +  +    VL +M     K +      
Sbjct: 232 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 291

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+         ER   +F K+   +  KP++   +  +       ++  A+  L    + 
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 351

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             LKPNT  +  LI  HCK G+ + AFE++ +MK+     PN+ TY+ +IDG CK G+ +
Sbjct: 352 -GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGF-LPNIYTYNAVIDGFCKKGKIQ 409

Query: 256 E-----------------------------------AIELFEEMVSKD------------ 268
           E                                   A++LF+ MV               
Sbjct: 410 EAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLI 469

Query: 269 ----------------------QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
                                  +LP   TY  +I G+C+ G+   A ++ E M  NGC 
Sbjct: 470 STYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCF 529

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +   Y  L++G CKE +L+EAK +++ M +  L P  +   TL   +CR  +   A+ +
Sbjct: 530 ADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSV 589

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L  + +R     + T ++++  L   G ++ A   L+K+  +   ++ A+Y   +N SC
Sbjct: 590 LDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFIN-SC 644



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 38/332 (11%)

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G L  A +++ EM+   +          L  GL + G F  A ++F+ M ++  + PD  
Sbjct: 125 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGL-ETGSFVYARKVFDGM-TRAGVCPDER 182

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           ++  L+   CR GKV+    ++  M   G + +    T ++   C++G+ ++  E F  M
Sbjct: 183 SFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 242

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 P+ + YT  I+  C+   V +A  +L+EM  RG K ++ T   ++ GLC+ G  
Sbjct: 243 LETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 302

Query: 396 EEALGMLEKLWYD------------------------------------GIYLNKASYRI 419
           E A  +  KL                                       G+  N  +Y  
Sbjct: 303 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 362

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C+ G  ++A EL+  M   GFLP+  T N ++   CK G  ++A   L      G
Sbjct: 363 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 422

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
            K +  ++ +L+   C+   + +A +L D +V
Sbjct: 423 LKFDKITYTILITEHCKQGHITYALDLFDRMV 454



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 89/239 (37%), Gaps = 50/239 (20%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y T    F   G L  A EV   M               +  F  AGR+ EA +++ EM+
Sbjct: 94  YVTAATAFVARGSLPMAHEVMRGM---------------VAAFGEAGRLPEAADMVLEMR 138

Query: 372 ERGCKADIVTFNIILG-GL----------------------------------CREGKIE 396
             G    + T N +L  GL                                  CREGK+E
Sbjct: 139 SHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVE 198

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           E   +L  +W  G  L+ A+  +V+   C+KG  +   E  R ML  G  P+       +
Sbjct: 199 EVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWI 258

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
             LCK    + A   L  +V  G KP   +   L++ +C+      AF L  +L+   S
Sbjct: 259 DGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 317


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 211/431 (48%), Gaps = 13/431 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + G+  N    + +L  L   K+  EA D +L +M+   C      +  ++  F      
Sbjct: 118 KTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQV 177

Query: 147 ERV----LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
           E+     LEM  +  P     P++   +T ++ L ++  VD A+   +       +KP+ 
Sbjct: 178 EKAYNLFLEMMDQGIP-----PNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR-GVKPDN 231

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N LI  +   G  +   ++L+EM    +  P+ ITY+ L+D LCKNGR REA   F+
Sbjct: 232 GTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE-PDCITYALLLDYLCKNGRCREARLFFD 290

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            M  K  I PD   Y +L+ G+   G +      ++ M  NG +PN   +  +   + K+
Sbjct: 291 SMFRKG-IKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKK 349

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
             ++EA  +F++M+   L PD + +  LI+  C+ GRVD+A+    +M   G   +I  F
Sbjct: 350 AMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVF 409

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           + ++ GLC  GK E+A  +  ++   GI ++   +  ++   C +G + +A  L+ LM+ 
Sbjct: 410 SSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIR 469

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G  P+  + N L+   C  G  ++AA  L  +V  G KP   ++ +L+   C+ R++  
Sbjct: 470 VGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDD 529

Query: 503 AFELLDELVIK 513
           A+ L  E+++K
Sbjct: 530 AYSLFREMLMK 540



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 1/300 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ PN C ++ILI   C+ G LE  F     + K+     N+I  S L+ GLC   R  E
Sbjct: 85  KVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRV-NVIVISQLLKGLCDAKRVDE 143

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++    +S+    PD + YN +I+GF R G+V++A  +   M + G  PNV  YTT++
Sbjct: 144 ATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVI 203

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G CK   +  AK VF +M +  +KPD   Y  LI+ +   G+  E +++L+EM   G +
Sbjct: 204 DGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE 263

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D +T+ ++L  LC+ G+  EA    + ++  GI  + A Y I+L+    KG L +    
Sbjct: 264 PDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSF 323

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L LM+  G  P+    N +     K  M E+A      + + G  P+  S+  L++ +C+
Sbjct: 324 LDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCK 383



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 221/455 (48%), Gaps = 5/455 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++   I+    E + + A  +F  + +Q G   N  TY T++D L + +  +    V +
Sbjct: 162 VAYNTVINGFFREGQVEKAYNLFLEMMDQ-GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQ 220

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
           QM     K   G +  L+  + +    + V++M  ++     E P     +  L+ L ++
Sbjct: 221 QMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE-PDCITYALLLDYLCKN 279

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            +   A+ F   S     +KP+  I+ IL+  +  +G L      L  M  + +S PN  
Sbjct: 280 GRCREARLFFD-SMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVS-PNRR 337

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            ++ +     K     EA+ +F +M  +  + PD +++  LID  C+ G+VD A      
Sbjct: 338 IFNIMFCAYAKKAMIEEAMHIFNKM-RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQ 396

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M N G  PN+F +++L+ G C  GK ++A+E+F E+ +  +  D + + TL+   C  GR
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGR 456

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           V EA  L+  M   G + +++++N ++ G C  G+I+EA  +L+ +  +G+  N+ +Y I
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI 516

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +L   C+   ++ A  L R ML +G  P  AT N +L  L + G   +A      ++   
Sbjct: 517 LLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR 576

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            K +  ++ +++  +C+   +  AF++   L  K+
Sbjct: 577 TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKD 611



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 201/447 (44%), Gaps = 43/447 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG   + A YA +L   A       + + L  M       +  IF  +   ++  ++ E
Sbjct: 294 RKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIE 353

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIF 205
             + +F+K+       P + +    ++ L +  +VD A   L++ NQ +   + PN  +F
Sbjct: 354 EAMHIFNKMRQ-QGLSPDVVSFGALIDALCKLGRVDDA--VLQF-NQMINEGVTPNIFVF 409

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           + L+   C  G  E A E+  E+    +   + + ++TL+  LC  GR  EA  L + M+
Sbjct: 410 SSLVYGLCTVGKWEKAEELFFEVLDQGICV-DAVFFNTLMCNLCNEGRVMEAQRLIDLMI 468

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +  + P+ ++YN L+ G C  G++D A K+++ M +NG  PN F YT L+ G+CK  ++
Sbjct: 469 -RVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRV 527

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
            +A  +F EM    + P    Y T+++   + GR  EA EL   M     K DI T+NII
Sbjct: 528 DDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNII 587

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC+   ++EA  M  +L      L+  ++ I++    + G  E A++L   +   G 
Sbjct: 588 LNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGL 647

Query: 446 LPHYATS-----------------------------------NELLVRLCKAGMAEDAAI 470
           +P   T                                    N L+ RL   G    A +
Sbjct: 648 VPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGV 707

Query: 471 ALFGLVEMGFKPESDSWALLVELICRG 497
            L+ L E  F  E+ + ++L+ L  RG
Sbjct: 708 YLYKLDEKNFSLEASTTSMLISLYSRG 734



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 77/249 (30%)

Query: 325 LQEAKEVFDEMK-----------NFLL------------------------------KPD 343
           L EA ++FDE+            N LL                               P+
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 344 TIGYTTLINCFCRAG-----------------------------------RVDEALE-LL 367
              Y+ LI CFCR G                                   RVDEA + LL
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M E GC  D+V +N ++ G  REG++E+A  +  ++   GI  N  +Y  V++  C+ 
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
             +++A  + + M+ RG  P   T N L+      G  ++    L  +   G +P+  ++
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269

Query: 488 ALLVELICR 496
           ALL++ +C+
Sbjct: 270 ALLLDYLCK 278



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREG---KIEEALGMLEKLWYD---GIYLN 413
           +DEAL+L  E+      A +  FN +L  + R G     E  + +  ++  +    +  N
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA-IAL 472
             +Y I++   C+ G LE       L+L  G+  +    ++LL  LC A   ++A  I L
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             + E G  P+  ++  ++    R  ++  A+ L  E++
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMM 188


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 209/421 (49%), Gaps = 6/421 (1%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  +L   A  +++E V    ++M           F  L+  F  CS     L +  K+ 
Sbjct: 74  FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +  E PS+    + L+     N++  A + +    +    +PN  ++N LI   CK G 
Sbjct: 134 KLGYE-PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS-GYEPNVVVYNTLIDGLCKNGE 191

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L  A E+L EM+K  +   +++TY+TL+ GLC +GR+ +A  +  +M+ K  I PD +T+
Sbjct: 192 LNIALELLNEMEKKGLG-ADVVTYNTLLTGLCYSGRWSDAARMLRDMM-KRSINPDVVTF 249

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
             LID F + G +D A+++ + M  +  +PN   Y +++NG C  G+L +AK+ FD M +
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               P+ + Y TLI+ FC+   VDE ++L + M   G  ADI T+N ++ G C+ GK+  
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +   +    +  +  ++ I+L+  C  GE+E A+     M            N ++ 
Sbjct: 370 ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIH 429

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
            LCKA   E A      L   G KP++ ++ +++  +C+      A EL+  +  KE G 
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM--KEEGI 487

Query: 518 I 518
           I
Sbjct: 488 I 488



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 199/399 (49%), Gaps = 4/399 (1%)

Query: 98   YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
            +  +L  +A+  KF+ V  +  +M           F  L+  F  CS     L +  K+ 
Sbjct: 607  FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 666

Query: 158  PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
             +   +PS+  + + LN   + N+   A + +  S       PN  I+N +I   CK   
Sbjct: 667  KLGF-RPSIVTLGSLLNGFCQGNRFQEAVSLVD-SMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 218  LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            L +A EV   M+K  +   + +TY+TLI GL  +GR+ +A  L  +MV K +I P+ + +
Sbjct: 725  LNNALEVFYCMEKKGIR-ADAVTYNTLISGLSNSGRWTDAARLLRDMV-KRKIDPNVIFF 782

Query: 278  NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
              LID F + G +  A+ + + M      PNVF Y +L+NGFC  G L +AK +FD M +
Sbjct: 783  TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 842

Query: 338  FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
                PD + Y TLI  FC++ RV++ ++L  EM  +G   D  T+N ++ G C+ GK+  
Sbjct: 843  KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902

Query: 398  ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
            A  +  ++   G+  +  +Y I+L+  C  G++EKA+ ++  +          T N ++ 
Sbjct: 903  AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 962

Query: 458  RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             LC+    ++A      L   G KP++ ++  ++  +CR
Sbjct: 963  GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1001



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 165/299 (55%), Gaps = 7/299 (2%)

Query: 162  EKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            EK  ++A +   N LI     S +   A   L+   +  ++ PN   F  LI    K G 
Sbjct: 736  EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGN 794

Query: 218  LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            L  A  + KEM +  +  PN+ TY++LI+G C +G   +A  +F+ MVSK    PD +TY
Sbjct: 795  LLEARNLYKEMIRRSV-VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG-CFPDVVTY 852

Query: 278  NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
            N LI GFC+  +V+   K+   M   G   + F Y TL++G+C+ GKL  A++VF+ M +
Sbjct: 853  NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 912

Query: 338  FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              + PD + Y  L++C C  G++++AL +++++++     DI+T+NII+ GLCR  K++E
Sbjct: 913  CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 972

Query: 398  ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            A  +   L   G+  +  +Y  +++  C+KG   +A +L R M   GF+P     +E L
Sbjct: 973  AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 1031



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 162/318 (50%), Gaps = 2/318 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +P+      L+   C+    + A  ++  M       PN++ Y+T+I+GLCKN    
Sbjct: 668 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLN 726

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+E+F  M  K  I  DA+TYN LI G    G+   A +++  M     +PNV  +T L
Sbjct: 727 NALEVFYCM-EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 785

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++ F KEG L EA+ ++ EM    + P+   Y +LIN FC  G + +A  +   M  +GC
Sbjct: 786 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VT+N ++ G C+  ++E+ + +  ++ Y G+  +  +Y  +++  CQ G+L  A +
Sbjct: 846 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +   M+  G  P   T N LL  LC  G  E A + +  L +     +  ++ ++++ +C
Sbjct: 906 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965

Query: 496 RGRKLLFAFELLDELVIK 513
           R  KL  A+ L   L  K
Sbjct: 966 RTDKLKEAWCLFRSLTRK 983



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 145/292 (49%), Gaps = 9/292 (3%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            E AF +  EM  SQ   P+++ ++ L+     N R  E +  F + +    I  D  ++
Sbjct: 52  FEDAFALFFEMVHSQ-PLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSF 109

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
            +LI  FCR  ++  A  ++  M   G  P++  + +L++GFC   ++ +A  +   M  
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +P+ + Y TLI+  C+ G ++ ALELL EM+++G  AD+VT+N +L GLC  G+  +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  ML  +    I  +  ++  +++   ++G L++A EL + M+     P+  T N ++ 
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            LC  G   DA      +   G  P   ++  L+   C+       F ++DE
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK-------FRMVDE 334



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 126/267 (47%), Gaps = 1/267 (0%)

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G   + RF +A  LF EMV   Q LP  + +  L+       + +      + M+  G +
Sbjct: 45  GFLHSIRFEDAFALFFEMV-HSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++++T L++ FC+  +L  A  V  +M     +P  + + +L++ FC   R+ +A  L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           +  M + G + ++V +N ++ GLC+ G++  AL +L ++   G+  +  +Y  +L   C 
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G    A  +LR M+ R   P   T   L+    K G  ++A      +++    P + +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  ++  +C   +L  A +  D +  K
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASK 310



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 99/205 (48%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ ++T ++    K  K      ++ +M+N  +  D   +T LI+CFCR  R+  AL L
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M + G +  IVT   +L G C+  + +EA+ +++ +   G   N   Y  V+N  C+
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
             +L  A+E+   M  +G      T N L+  L  +G   DAA  L  +V+    P    
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           +  L++   +   LL A  L  E++
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMI 806



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 36/296 (12%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +F +A  LF EM+    I P  + +  ++    +  K D    +   M+N G + +++++
Sbjct: 584 KFDDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 642

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L++ FC+  +L  A  +  +M     +P  +   +L+N FC+  R  EA+ L+  M  
Sbjct: 643 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 702

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G   ++V +N ++ GLC+   +  AL +   +   GI  +  +Y  +++     G    
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 433 AIELLR-----------------------------------LMLCRGFLPHYATSNELLV 457
           A  LLR                                    M+ R  +P+  T N L+ 
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             C  G   DA      +V  G  P+  ++  L+   C+ +++    +L  E+  +
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 878



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 73/164 (44%)

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           F  + R ++A  L  EM        IV F  +L       + E  +   +K+   GI  +
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             S+ I+++  C+   L  A+ +L  M+  G+ P   T   LL   C      DA   + 
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
            +V+ G++P    +  L++ +C+  +L  A ELL+E+  K  G 
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 163/287 (56%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L   F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A  LF+EM+ K  ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANVLFDEMLDKG-LVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G+ P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G ++ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLNE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A  +FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 147/278 (52%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLR-PSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A  + + M + G  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D  T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+KP
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 158/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +  S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTLRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + N   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEENLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G ++E   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  ++  G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 233/525 (44%), Gaps = 81/525 (15%)

Query: 15  SSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTC-VDARKRSRFISHGAAISLIKCEK 73
           ++ +  +S+ P +SPL           PP ++  T     R+ +RF+S            
Sbjct: 62  ATATNRNSNFPSLSPL-----------PPSKSELTADFSGRRSTRFVSK-------MHFG 103

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
            P+ A    +T + ++   H  A      DK         +D+VL       C   +  F
Sbjct: 104 RPKTAAAARHTSTAEEALRH--AIRFASDDK--------GIDSVLLNFESRLCGSDDYTF 153

Query: 134 LNLMKHFSNCSLHERVLEMFH-KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK-- 190
           L  ++   N     + +  F   +    R     K  S  +++L    QV+LA+N  +  
Sbjct: 154 L--LRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETA 211

Query: 191 ----YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
               Y N           F+ LI  + + G  + A +V + MK S +  PNL+TY+ +ID
Sbjct: 212 LNEGYGN-------TVYAFSALISAYGRSGYCDEAIKVFETMKSSGLK-PNLVTYNAVID 263

Query: 247 GLCKNG-RFREAIELFEEM----VSKDQIL------------------------------ 271
              K G  F  A E+F+EM    V  D+I                               
Sbjct: 264 ACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIE 323

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
            D  TYN L+D  C+GG++D A +IM  M      PNV  Y+T+++G+ K G+L EA  +
Sbjct: 324 QDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNL 383

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F+EMK   +  D + Y TL++ + + GR +EAL + KEM+  G K D VT+N +LGG  +
Sbjct: 384 FNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGK 443

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +GK EE   + E++  + I+ N  +Y  +++   + G  ++A+E+ R     G       
Sbjct: 444 QGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVL 503

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + L+  LCK G+ E A   L  + + G +P   ++  +++   R
Sbjct: 504 YSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGR 548



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 138/231 (59%), Gaps = 2/231 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+   CK G ++ AF+++ EM +  +  PN++TYST+IDG  K GR  EA+ LF EM
Sbjct: 329 YNTLLDAVCKGGQMDLAFQIMSEMPRKHI-MPNVVTYSTVIDGYAKAGRLDEALNLFNEM 387

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
                I  D ++YN L+  + + G+ + A  + + M+++G   +   Y  L+ G+ K+GK
Sbjct: 388 -KFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 446

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            +E K VF+EMK   + P+ + Y+TLI+ + + G   EA+E+ +E K+ G KAD+V ++ 
Sbjct: 447 YEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSA 506

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           ++  LC+ G +E A+  L+++  +GI  N  +Y  +++   + G  E  I+
Sbjct: 507 LIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 155/351 (44%), Gaps = 43/351 (12%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   +  TY T+LD + +  + +    ++ +M  +    +   +  ++  ++     + 
Sbjct: 320 RGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDE 379

Query: 149 VLEMFH--KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            L +F+  K   I  ++ S    +T L++  +  + + A N  K   +   +K +   +N
Sbjct: 380 ALNLFNEMKFASIGLDRVSY---NTLLSIYAKLGRFEEALNVCK-EMESSGIKKDAVTYN 435

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L+  + K+G  E    V +EMK  ++ +PNL+TYSTLID   K G ++EA+E+F E   
Sbjct: 436 ALLGGYGKQGKYEEVKRVFEEMKAERI-FPNLLTYSTLIDVYSKGGLYQEAMEVFREF-K 493

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  +  D + Y+ LID  C+ G V+ A   ++ M   G  PNV  Y ++++ F + G  +
Sbjct: 494 KAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAE 553

Query: 327 -------------------------EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                                       EV D+  N ++K   I         C A + +
Sbjct: 554 CVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIK---IFGQLAAEKTCHAKKEN 610

Query: 362 EA-------LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
                    L +  +M E   K ++VTF+ IL    R    E+A  +LE+L
Sbjct: 611 RGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEEL 661



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 3/200 (1%)

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G+++ AK VF+   N         ++ LI+ + R+G  DEA+++ + MK  G K ++VT+
Sbjct: 199 GQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTY 258

Query: 383 NIILGGLCREGKIE--EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           N ++   C +G ++   A  + +++  +G+  ++ ++  +L    + G  E A  L   M
Sbjct: 259 NAVIDA-CGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEM 317

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           L RG      T N LL  +CK G  + A   +  +      P   +++ +++   +  +L
Sbjct: 318 LYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRL 377

Query: 501 LFAFELLDELVIKESGTIQV 520
             A  L +E+     G  +V
Sbjct: 378 DEALNLFNEMKFASIGLDRV 397


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 190/349 (54%), Gaps = 10/349 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P++   ST ++   +S ++ LA ++F  +S +   L PN   F  LI  +CK G LE A 
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSF--HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + KEM++ +MS  N++TY+ LIDG CK G  + A E++  MV +D++ P++L Y  +ID
Sbjct: 219 SLYKEMRRVRMSL-NVVTYTALIDGFCKKGEMQRAEEMYSRMV-EDRVEPNSLVYTTIID 276

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           GF + G  D A K +  M N G   ++  Y  +++G C  GKL+EA E+ ++M+   L P
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D + +TT++N + ++GR+  A+ +  ++ ERG + D+V  + ++ G+ + G++ EA+   
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI--- 393

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +++     N   Y ++++  C++G+  +   L   +   G +P        +  LCK 
Sbjct: 394 --VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G   DA      +V+ G   +  ++  L+  +     ++ A ++ DE++
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 204/409 (49%), Gaps = 53/409 (12%)

Query: 125 TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVD 183
           TC  H    +N     SNC     +L +    + ++R   P   + ++ ++ + +  QV 
Sbjct: 23  TCNKHIHQLIN-----SNCG----ILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVK 73

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ--------MSY 235
            A++ + +S      +P+   +N LI  HC+ G + SA  VL+ ++ S         +S+
Sbjct: 74  FAEDIV-HSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSF 132

Query: 236 ----------------------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
                                       PN++TYST ID  CK+G  + A++ F  M  +
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM-KR 191

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D + P+ +T+  LIDG+C+ G ++ A  + + M+    + NV  YT L++GFCK+G++Q 
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+E++  M    ++P+++ YTT+I+ F + G  D A++ L +M  +G + DI  + +I+ 
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC  GK++EA  ++E +    +  +   +  ++N   + G ++ A+ +   ++ RGF P
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
                + ++  + K G   +A +  +  +E   K     + +L++ +C+
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAIV--YFCIE---KANDVMYTVLIDALCK 415



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 189/381 (49%), Gaps = 12/381 (3%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E Q AL+ F+++ ++   + N  T+  ++D   +    E   ++ ++M       +   +
Sbjct: 178 ELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYS 192
             L+  F      +R  EM+ ++    R +P+    +T ++   +    D A  FL K  
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVE-DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
           NQ +RL  +   + ++I   C  G L+ A E++++M+KS +  P+++ ++T+++   K+G
Sbjct: 296 NQGMRL--DITAYGVIISGLCGNGKLKEATEIVEDMEKSDL-VPDMVIFTTMMNAYFKSG 352

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           R + A+ ++ +++ +    PD +  + +IDG  + G++  A  I+ F        N   Y
Sbjct: 353 RMKAAVNMYHKLIERG-FEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKA---NDVMY 406

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L++  CKEG   E + +F ++    L PD   YT+ I   C+ G + +A +L   M +
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G   D++ +  ++ GL  +G + EA  + +++   GI  + A + +++    ++G +  
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526

Query: 433 AIELLRLMLCRGFLPHYATSN 453
           A +LL  M  RG +   + ++
Sbjct: 527 ASDLLLDMQRRGLVTAVSDAD 547



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 155/330 (46%), Gaps = 39/330 (11%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +  A + L  ++KS  + P+  T +  I  L  +     +++    +VS+    P   ++
Sbjct: 2   VREALQFLSRLRKSS-NLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYT-PHRSSF 59

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK- 336
           N ++   C+ G+V  A+ I+  M   GC P+V +Y +L++G C+ G ++ A  V + ++ 
Sbjct: 60  NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119

Query: 337 --NFLLKPDTIG----------------------------------YTTLINCFCRAGRV 360
              F+ KPD +                                   Y+T I+ FC++G +
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
             AL+    MK      ++VTF  ++ G C+ G +E A+ + +++    + LN  +Y  +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           ++  C+KGE+++A E+   M+     P+      ++    + G +++A   L  ++  G 
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDEL 510
           + +  ++ +++  +C   KL  A E+++++
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDM 329


>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
           protein-like proteins; contains similarity to Pfam
           family PF01535 (Domain of unknown function),
           score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
 gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 181/355 (50%), Gaps = 11/355 (3%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQ-NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           E P   A+ +CL        +D+++ N L      ++++P+     ILI   CK   ++ 
Sbjct: 293 EAPPFNALLSCL-----GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE 347

Query: 221 AFEVLKEMKKSQMSYPNLIT-----YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           A EV ++M+  +    N+I      ++TLIDGLCK GR +EA EL   M  +++ +P+A+
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYN LIDG+CR GK++ AK+++  MK +   PNV    T++ G C+   L  A   F +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +   +K + + Y TLI+  C    V++A+   ++M E GC  D   +  ++ GLC+  + 
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            +A+ ++EKL   G  L+  +Y +++   C K   EK  E+L  M   G  P   T N L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +    K    E     +  + E G  P   ++  +++  C   +L  A +L  ++
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 161/351 (45%), Gaps = 43/351 (12%)

Query: 147 ERVLEMFHKIH-PITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPN 201
           +  LE+F ++    T +   +KA S   N LI+      ++  A+  L       R  PN
Sbjct: 346 DEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPN 405

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N LI  +C+ G LE+A EV+  MK+ ++  PN++T +T++ G+C++     A+  F
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK-PNVVTVNTIVGGMCRHHGLNMAVVFF 464

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            +M  K+ +  + +TY  LI   C    V++A    E M   GC+P+   Y  L++G C+
Sbjct: 465 MDM-EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523

Query: 322 EGKLQEAKEVFDEMK-----------NFLL------------------------KPDTIG 346
             +  +A  V +++K           N L+                        KPD+I 
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL- 405
           Y TLI+ F +    +    ++++M+E G    + T+  ++   C  G+++EAL + + + 
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            +  +  N   Y I++N   + G   +A+ L   M  +   P+  T N L 
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 111/207 (53%), Gaps = 3/207 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  I+  LI   C+      A  V++++K+   S  +L+ Y+ LI   C      +  E
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL-DLLAYNMLIGLFCDKNNAEKVYE 567

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  +M  K+   PD++TYN LI  F +    +  +++ME M+ +G +P V  Y  +++ +
Sbjct: 568 MLTDM-EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626

Query: 320 CKEGKLQEAKEVFDEMK-NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           C  G+L EA ++F +M  +  + P+T+ Y  LIN F + G   +AL L +EMK +  + +
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKL 405
           + T+N +   L  + + E  L +++++
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEM 713



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 3/169 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N+LI   C +   E  +E+L +M+K +   P+ ITY+TLI    K+  F E++E   E 
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEK-EGKKPDSITYNTLISFFGKHKDF-ESVERMMEQ 606

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK-NNGCNPNVFNYTTLMNGFCKEG 323
           + +D + P   TY  +ID +C  G++D A K+ + M  ++  NPN   Y  L+N F K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
              +A  + +EMK  +++P+   Y  L  C     + +  L+L+ EM E
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 17/286 (5%)

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-DALTYNVLIDGFCR 286
           MK SQ+        + ++D L +NG   +A ++ +EM+ K+ + P + +T ++++    +
Sbjct: 182 MKNSQVR-------NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK 234

Query: 287 GGKVDRAKKI--MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
              +   K I  +    ++G +PN    T  ++  CK  +   A ++  ++       + 
Sbjct: 235 ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEA 294

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             +  L++C  R   +    +L+ +M E   + D+VT  I++  LC+  +++EAL + E+
Sbjct: 295 PPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ 354

Query: 405 L----WYDG--IYLNKASYRIVLNFSCQKGELEKAIELL-RLMLCRGFLPHYATSNELLV 457
           +      DG  I  +   +  +++  C+ G L++A ELL R+ L    +P+  T N L+ 
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             C+AG  E A   +  + E   KP   +   +V  +CR   L  A
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/352 (20%), Positives = 141/352 (40%), Gaps = 84/352 (23%)

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
           L E+ K +     ++    LI    + G   +++ ++E +   D  + ++   NV++D  
Sbjct: 139 LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL---DSNMKNSQVRNVVVDVL 195

Query: 285 CRGGKVDRAKKIMEFM---------------------------------------KNNGC 305
            R G VD A K+++ M                                        ++G 
Sbjct: 196 LRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGV 255

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVF-DEMKN--------------------------- 337
           +PN    T  ++  CK  +   A ++  D MKN                           
Sbjct: 256 SPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMND 315

Query: 338 -------FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC------KADIVTFNI 384
                    ++PD +    LIN  C++ RVDEALE+ ++M+ +        KAD + FN 
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYL-NKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           ++ GLC+ G+++EA  +L ++  +   + N  +Y  +++  C+ G+LE A E++  M   
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
              P+  T N ++  +C+      A +    + + G K    ++  L+   C
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP++  +N LI    K    ES   ++++M++  +  P + TY  +ID  C  G   EA+
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD-PTVTTYGAVIDAYCSVGELDEAL 636

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF++M    ++ P+ + YN+LI+ F + G   +A  + E MK     PNV  Y  L   
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696

Query: 319 FCKEGKLQEAKEVFDEMKNFLL 340
             ++ + +   ++ DEM   L+
Sbjct: 697 LNEKTQGETLLKLMDEMVEHLV 718


>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           herrerae]
          Length = 395

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 146/243 (60%), Gaps = 2/243 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 154 LRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQ-PDVYTYSVLINGLCKESKMDDA 212

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   +P++  Y TL  
Sbjct: 213 NELFDEMLDKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTY 271

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD I YTTLI+  C+ G ++ A E  K M +   + 
Sbjct: 272 GLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRL 331

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  N  +Y +++N  C+KG++    +LL
Sbjct: 332 DDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLL 391

Query: 438 RLM 440
           + M
Sbjct: 392 KEM 394



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N L++G+ R G +D 
Sbjct: 118 GYPASLYFFNILMHRFCKEGDIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIRLGDLDE 176

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM +  L P+ + +TTLI+
Sbjct: 177 GFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLID 236

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N +  GLC++G +++A  +++++   G+  
Sbjct: 237 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKP 296

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G++E A E  + M+             L+  LC+ G + DA   L
Sbjct: 297 DKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKML 356

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP   ++ +++   C+   +    +LL E+
Sbjct: 357 REMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 140/244 (57%), Gaps = 5/244 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 155 RPSVVSFNTLMNGYIRLG--DLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDA 212

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  + PD +TYN L 
Sbjct: 213 NELFDEMLDKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLT 270

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL++G CKEG ++ A E    M    ++
Sbjct: 271 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIR 330

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K +  T+ +I+   C++G +     +
Sbjct: 331 LDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKL 390

Query: 402 LEKL 405
           L+++
Sbjct: 391 LKEM 394



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 7/211 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 190 QPDVYTYSVLINGLCKESKMDDANELF---DEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 246

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M    +S P+LITY+TL  GLCK G  ++A +L +EM  K  + PD +TY  L
Sbjct: 247 AMEIYKQMLSQSLS-PDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKG-LKPDKITYTTL 304

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G ++ A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 305 IDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGL 364

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           KP+   YT +IN FC+ G V    +LLKEM+
Sbjct: 365 KPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 52/318 (16%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDALTY 277
           +Y T+I  LC +    EA  L + +VS+                      D  +   L  
Sbjct: 2   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 61

Query: 278 NVLIDGFCRGG--------------KVDRAKKIME-FMK---------------NNGCNP 307
             L  GF R                 +D  +K++E  MK                 G   
Sbjct: 62  XYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPA 121

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +++ +  LM+ FCKEG ++ A+ VFD +  + L+P  + + TL+N + R G +DE   L 
Sbjct: 122 SLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 181

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ 
Sbjct: 182 NAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 241

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G ++ A+E+ + ML +   P   T N L   LCK G  + A   +  +   G KP+  ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 301

Query: 488 ALLVELICRGRKLLFAFE 505
             L++  C+   +  AFE
Sbjct: 302 TTLIDGCCKEGDMETAFE 319



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 40/300 (13%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 32  KGSASAVFAAILETKGTQRS--DIYVFSGLITXYLESGFLRDAIECYRLTREHKFWVP-- 87

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                          +D  +K++E +           Y  L+ GF KE  + E       
Sbjct: 88  ---------------LDXCRKVLEHLMK-------LKYFKLVWGFYKE--ILECG----- 118

Query: 335 MKNFLLKPDTIGY-TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
                  P ++ +   L++ FC+ G +  A  +   + + G +  +V+FN ++ G  R G
Sbjct: 119 ------YPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLG 172

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            ++E   +   +   G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T  
Sbjct: 173 DLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 232

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            L+   CK G  + A      ++     P+  ++  L   +C+   L  A +L+DE+ +K
Sbjct: 233 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMK 292


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 163/287 (56%), Gaps = 3/287 (1%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           SL   +  ++  ++  ++ LAQ+    +     L+P+   FN L+  + K G L   F +
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFD-AITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
              M+ S +  P++ TYS LI+GLCK  +  +A  LF+EM+ K  ++P+ +T+  LIDG 
Sbjct: 194 KNAMQASGVQ-PDVYTYSVLINGLCKESKMDDANVLFDEMLDKG-LVPNGVTFTTLIDGH 251

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+VD A +I + M +   +P++  Y TL+ G CK+G L++A+++ DEM    LKPD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             YTTLI+  C+ G ++ A E  K M +   + D V +  ++ GLC+EG+  +A  ML +
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   G+     +Y +++N  C+KG++    +LL+ M   G+ P   T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+    K G  R A  +F+  ++K  + P  +++N L++G+ + G ++ 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDA-ITKWGLRPSVVSFNTLMNGYIKLGDLNE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A  +FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEM 407



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 147/278 (52%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+    K G +  A  V   + K  +  P++++++TL++G  K G   E   L   M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLR-PSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A  + + M + G  PN   +TTL++G CK G+
Sbjct: 198 QASG-VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +A +L+ EM  +G K D  T+  
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+KP
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKP 414



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + N   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVLEHLMKLKYFKLVWGFYEENLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ F KEG+++ A+ VFD +  + L+P  + + TL+N + + G ++E   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C+
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ + ML +   P   T N L+  LCK G  + A   +  ++  G KP+  +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+    N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQ-PDVYTYSVLINGLCKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E F+EM+ K  ++P+ +T+  LIDG C+ G+VD AK+I + M +    P++  Y TL+ 
Sbjct: 232 NEXFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ D+M    LKPD I YTTLIB  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++    +  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 411 KEMQRDGHAPSVVTYNVLM 429



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 157/278 (56%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++ N L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSXNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A E+ K+M  +    D++T+N ++ GLC++G +++A  +++ +   G+  
Sbjct: 256 GHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  ++B  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +  KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 147/261 (56%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK       ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSXNTLMNGYIRLG--DLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E   EM    +  PN +T++TLIDG CKNGR   A E++++M+S+  +LPD +TYN LI
Sbjct: 232 NEXFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+   YTTL+BG CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM     K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHAPSVVTYNVLMN 430



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 132/227 (58%), Gaps = 5/227 (2%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           +P +   S  +N L + +++D A     +    ++ L PN   F  LI  HCK G ++ A
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANE--XFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+ K+M  SQ   P+LITY+TLI GLCK G  ++A +L ++M S   + PD +TY  LI
Sbjct: 267 KEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM-SMKGLKPDKITYTTLI 324

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           BG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  LK
Sbjct: 325 BGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLK 384

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           PDT  YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 385 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 143/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +  F EA  L + +VS+                      D  +   
Sbjct: 18  TLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIYVFSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E++                   G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  +   TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A    +++   G+  N  ++  +++  
Sbjct: 198 RLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A E+ + ML +  LP   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 ITYTTLIBGCCKEGDLDSAFE 338



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 39/230 (16%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   N  T+ T++D   +  + +    + +QM                       L + 
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQM-----------------------LSQS 277

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           +L             P L   +T +  L +   +  A + +   +    LKP+   +  L
Sbjct: 278 LL-------------PDLITYNTLIYGLCKKGDLKQAHDLIDDMSMK-GLKPDKITYTTL 323

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G L+SAFE  K M +  +   +++ Y+ LI GLC+ GR  +A ++  EM+S  
Sbjct: 324 IBGCCKEGDLDSAFEHRKRMIQENIRLDDVV-YTALISGLCQEGRSVDAEKMLREMLSV- 381

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ++ PD  TY ++I+ FC+ G V +  K+++ M+ +G  P+V  Y  LMNG
Sbjct: 382 RLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 201/416 (48%), Gaps = 40/416 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A++IFN +  Q+G + +  +Y  ++D L +  + +  +    QM  E       +F +L+
Sbjct: 397 AMDIFNKM-RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLV 455

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    E+V E+F ++                LN+ I                    
Sbjct: 456 YGLCTVDKWEKVEELFFEM----------------LNVGIH------------------- 480

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN   FN ++ + CK G +     ++  ++   +  P++I+Y+TLIDG C  G   EA
Sbjct: 481 --PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVR-PDVISYNTLIDGHCLAGTIDEA 537

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L E MVS   + PD+ +YN L+ G+C+ G++D A      M +NG  P V  Y T+++
Sbjct: 538 SKLLEGMVSVG-LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILH 596

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  +  +  EAKE++  M N   K D   Y  ++N  C++  VDEA+++ + +  +G + 
Sbjct: 597 GLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQL 656

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +I+TFNI++G L + G+ E+A+ +   +  +G+  N  +YR+V+    ++G LE+   L 
Sbjct: 657 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLF 716

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             M   G  P+    N L+ RL   G    A   L  L E  F  E+ + ++L+ +
Sbjct: 717 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 772



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 39/454 (8%)

Query: 88  QKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           + G+  ++     +L+ L   K+  EA+D +L++M    C      +  L+K   N    
Sbjct: 122 KTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRA 181

Query: 147 ERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHL------- 196
           E  LE+ H +    +    P++ + ST +N      QVD   N FL+  ++ +       
Sbjct: 182 EEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTY 241

Query: 197 --------------------------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
                                      +KPN   +N LI  +   G  +    +L+EM  
Sbjct: 242 TTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
                PN  TY +L++ LCKNGR REA   F+ M+ K  I P   TY +++ G+   G +
Sbjct: 302 GG-PKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKG-IKPSVTTYGIMLHGYATKGAL 359

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
                ++  M  NG +PN   +    + + K G + +A ++F++M+   L PD + Y  L
Sbjct: 360 SEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGAL 419

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+  C+ GRVD+A     +M   G   DIV F+ ++ GLC   K E+   +  ++   GI
Sbjct: 420 IDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGI 479

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           + N   +  +L   C++G + +   L+  + C G  P   + N L+   C AG  ++A+ 
Sbjct: 480 HPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 539

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            L G+V +G KP+S S+  L+   C+  ++  A+
Sbjct: 540 LLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 200/412 (48%), Gaps = 9/412 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   +  TY  +L   A       +  +L  M       +  IF      ++ C + ++
Sbjct: 337 KGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDK 396

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFN 206
            +++F+K+       P   +    ++ L +  +VD A+  +K+ NQ +   + P+  +F+
Sbjct: 397 AMDIFNKMRQ-QGLSPDAVSYGALIDALCKLGRVDDAE--VKF-NQMINEGVTPDIVVFS 452

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            L+   C     E   E+  EM    + +PN++ ++T++  LCK GR  E   L + +  
Sbjct: 453 SLVYGLCTVDKWEKVEELFFEMLNVGI-HPNIVFFNTILCNLCKEGRVMEGQRLVDSIEC 511

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              + PD ++YN LIDG C  G +D A K++E M + G  P+ F+Y TL++G+CK G++ 
Sbjct: 512 MG-VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A   F +M +  + P  + Y T+++   +  R  EA EL   M   G K DI T+NIIL
Sbjct: 571 SAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIIL 630

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+   ++EA+ M + L   G+ LN  ++ I++    + G  E A++L   +   G +
Sbjct: 631 NGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLV 690

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW-ALLVELICRG 497
            +  T   ++  L + G  E+       + + G  P S    AL+  L+ RG
Sbjct: 691 QNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 216/466 (46%), Gaps = 39/466 (8%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            +G   +  TY T++D L + + F+  +AV +QM     K +   +  L+  + +    +
Sbjct: 231 DRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWK 290

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK----------------- 190
            V+ M  ++      KP+     + LN L ++ +   A+ F                   
Sbjct: 291 EVVRMLEEMSA-GGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIM 349

Query: 191 ---------YSNQHLRL--------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
                     S  H  L         PN  IFNI    + K G ++ A ++  +M++  +
Sbjct: 350 LHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGL 409

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           S P+ ++Y  LID LCK GR  +A   F +M++ + + PD + ++ L+ G C   K ++ 
Sbjct: 410 S-PDAVSYGALIDALCKLGRVDDAEVKFNQMIN-EGVTPDIVVFSSLVYGLCTVDKWEKV 467

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           +++   M N G +PN+  + T++   CKEG++ E + + D ++   ++PD I Y TLI+ 
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C AG +DEA +LL+ M   G K D  ++N +L G C+ G+I+ A     K+  +GI   
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPG 587

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             +Y  +L+   Q     +A EL   M+  G      T N +L  LCK+   ++A     
Sbjct: 588 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQ 647

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQ 519
            L   G +    ++ +++  + +G +   A +L     I  +G +Q
Sbjct: 648 NLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF--AAIPANGLVQ 691



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 170/343 (49%), Gaps = 40/343 (11%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           ++++ PN C ++ILI   C+ G LE  F     + K+     +++  + L++GLC   R 
Sbjct: 87  YIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVI-NQLLNGLCDGKRV 145

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFN 311
            EA+++  + + +   +PD ++YN+L+ G C   + + A +++  M ++    C PNV +
Sbjct: 146 GEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVS 205

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+T++NGF  EG++ +   +F EM +  + PD + YTT+I+  C+A   D A  + ++M 
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ----- 426
           + G K +I T+N ++ G    GK +E + MLE++   G   N  +Y  +LN+ C+     
Sbjct: 266 DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCR 325

Query: 427 ------------------------------KGELEKAIELLRLMLCRGFLPHYATSNELL 456
                                         KG L +  +LL LM+  G  P++   N   
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFF 385

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
               K G+ + A      + + G  P++ S+  L++ +C+ GR
Sbjct: 386 SAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGR 428



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 17/247 (6%)

Query: 210  KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
            +HH K  +L   + +L E   S +              + K  R  +A  LF EM+ K  
Sbjct: 779  QHHAK--SLPKKYRILNEANSSAL--------------IKKARRIDDAYSLFREMLMKG- 821

Query: 270  ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
            + PD +TYN ++ G  + G+   AK++   M N+    N++ Y  ++NG CK   + EA 
Sbjct: 822  LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAF 881

Query: 330  EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            ++F  + +  L+ + I +  +I    + GR ++A++L   +   G   D+VT+ ++   L
Sbjct: 882  KMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENL 941

Query: 390  CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
              EG +EE  G+   +   G  L+      ++    Q+G++ +A   L  +  + F    
Sbjct: 942  IEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEA 1001

Query: 450  ATSNELL 456
            +T++EL+
Sbjct: 1002 STTSELI 1008



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 172/417 (41%), Gaps = 54/417 (12%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TYETCKFHEGIFLNLMKH 139
           G   ++ +Y T+L    +  + ++  +  R+M          TY T     G+F    K 
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT--ILHGLFQT--KR 603

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQHLRL 198
           FS     E  L M +     +  K  +   +  LN L +SN VD A + F    ++ L+L
Sbjct: 604 FSEAK--ELYLNMIN-----SGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQL 656

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
             N   FNI+I    K G  E A ++   +  + +   N++TY  +++ L + G   E  
Sbjct: 657 --NIITFNIMIGALLKGGRKEDAMDLFAAIPANGL-VQNVVTYRLVVENLIEEGSLEEFD 713

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            LF  M  K+   P++   N L+      G + RA   +  +     +      + L++ 
Sbjct: 714 SLFSAM-EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 772

Query: 319 FC----------------------------KEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           F                             K  ++ +A  +F EM    L PD + Y T+
Sbjct: 773 FSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTI 832

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           ++   + GR  EA EL   M     + +I T+NIIL GLC+   ++EA  M + L   G+
Sbjct: 833 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            LN  ++ I++    + G  E A++L   +   G +P   T   +   L + G  E+
Sbjct: 893 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEE 949



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 11/271 (4%)

Query: 257 AIELFEEMVSKD---QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            + LF  MV +D   ++ P+  TY++LI  FCR G ++        +   G   +     
Sbjct: 75  VVSLFNRMV-RDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVIN 133

Query: 314 TLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            L+NG C   ++ EA +V    M      PDT+ Y  L+   C   R +EALELL  M +
Sbjct: 134 QLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMAD 193

Query: 373 R---GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
                C  ++V+++ ++ G   EG++++   +  ++   GI  +  +Y  V++  C+   
Sbjct: 194 DQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQL 253

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            ++A  + + M+  G  P+  T N L+      G  ++    L  +   G KP   ++  
Sbjct: 254 FDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGS 313

Query: 490 LVELIC---RGRKLLFAFELLDELVIKESGT 517
           L+  +C   R R+  F F+ +    IK S T
Sbjct: 314 LLNYLCKNGRCREARFFFDSMIGKGIKPSVT 344



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 2/176 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+   +N ++    + G    A E+   M  S+    N+ TY+ +++GLCK+    EA
Sbjct: 822 LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM-NIYTYNIILNGLCKSNCVDEA 880

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++F+ + SK   L + +T+N++I    +GG+ + A  +   +  NG  P+V  Y  +  
Sbjct: 881 FKMFQSLCSKGLQL-NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAE 939

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
              +EG L+E   +F  M+      D+     L+    + G +  A   L ++ E+
Sbjct: 940 NLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEK 995


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 199/399 (49%), Gaps = 4/399 (1%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  +L  +A+  KF+ V  +  +M           F  L+  F  CS     L +  K+ 
Sbjct: 82  FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +   +PS+  + + LN   + N+   A + +  S       PN  I+N +I   CK   
Sbjct: 142 KLGF-RPSIVTLGSLLNGFCQGNRFQEAVSLVD-SMDGFGFVPNVVIYNTVINGLCKNRD 199

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L +A EV   M+K  +   + +TY+TLI GL  +GR+ +A  L  +MV K +I P+ + +
Sbjct: 200 LNNALEVFYCMEKKGIR-ADAVTYNTLISGLSNSGRWTDAARLLRDMV-KRKIDPNVIFF 257

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
             LID F + G +  A+ + + M      PNVF Y +L+NGFC  G L +AK +FD M +
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               PD + Y TLI  FC++ RV++ ++L  EM  +G   D  T+N ++ G C+ GK+  
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +  ++   G+  +  +Y I+L+  C  G++EKA+ ++  +          T N ++ 
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            LC+    ++A      L   G KP++ ++  ++  +CR
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 165/299 (55%), Gaps = 7/299 (2%)

Query: 162 EKPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           EK  ++A +   N LI     S +   A   L+   +  ++ PN   F  LI    K G 
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGN 269

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L  A  + KEM +  +  PN+ TY++LI+G C +G   +A  +F+ MVSK    PD +TY
Sbjct: 270 LLEARNLYKEMIRRSV-VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG-CFPDVVTY 327

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N LI GFC+  +V+   K+   M   G   + F Y TL++G+C+ GKL  A++VF+ M +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             + PD + Y  L++C C  G++++AL +++++++     DI+T+NII+ GLCR  K++E
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           A  +   L   G+  +  +Y  +++  C+KG   +A +L R M   GF+P     +E L
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 162/318 (50%), Gaps = 2/318 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +P+      L+   C+    + A  ++  M       PN++ Y+T+I+GLCKN    
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLN 201

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+E+F  M  K  I  DA+TYN LI G    G+   A +++  M     +PNV  +T L
Sbjct: 202 NALEVFYCM-EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++ F KEG L EA+ ++ EM    + P+   Y +LIN FC  G + +A  +   M  +GC
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VT+N ++ G C+  ++E+ + +  ++ Y G+  +  +Y  +++  CQ G+L  A +
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +   M+  G  P   T N LL  LC  G  E A + +  L +     +  ++ ++++ +C
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440

Query: 496 RGRKLLFAFELLDELVIK 513
           R  KL  A+ L   L  K
Sbjct: 441 RTDKLKEAWCLFRSLTRK 458



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 99/205 (48%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++ ++T ++    K  K      ++ +M+N  +  D   +T LI+CFCR  R+  AL L
Sbjct: 77  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L +M + G +  IVT   +L G C+  + +EA+ +++ +   G   N   Y  V+N  C+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
             +L  A+E+   M  +G      T N L+  L  +G   DAA  L  +V+    P    
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
           +  L++   +   LL A  L  E++
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMI 281



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 36/296 (12%)

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           +F +A  LF EM+    I P  + +  ++    +  K D    +   M+N G + +++++
Sbjct: 59  KFDDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T L++ FC+  +L  A  +  +M     +P  +   +L+N FC+  R  EA+ L+  M  
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G   ++V +N ++ GLC+   +  AL +   +   GI  +  +Y  +++     G    
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237

Query: 433 AIELLR-----------------------------------LMLCRGFLPHYATSNELLV 457
           A  LLR                                    M+ R  +P+  T N L+ 
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             C  G   DA      +V  G  P+  ++  L+   C+ +++    +L  E+  +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 218/447 (48%), Gaps = 43/447 (9%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           + E   A  +FN +  QKG   +  TY +I+D L + +  +  + VLRQM  +  +  +G
Sbjct: 245 QGEVSKACNLFNEMV-QKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE-PDG 302

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           +  N + H  +CS H +                                  + A+ F K 
Sbjct: 303 VTYNAIIHGYSCSGHWK----------------------------------ESAKMFRKM 328

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           +++ L   P+T  F+  +   CK G  + A E+ + M  ++   P++++YS L+ G    
Sbjct: 329 TSKGL--IPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT-TKGHMPDIVSYSILLHGYATE 385

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GRF +   LF  M  K  I+ +    N+LI    + G +D A  +   M+  G  PNV  
Sbjct: 386 GRFADMNNLFHSMADKG-IVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y+TL++ FC+ G+L +A E F +M +  ++P+T  Y +LI+ FC  G + +A E + EM 
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504

Query: 372 ERGC-KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            +G  + +IV F+ I+  LC EG++ +A  +   + + G      ++  +++  C  G++
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 564

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           EKA  +L  M+  G  P   T+N L+   CK+G  +D  I    ++    KP + ++ ++
Sbjct: 565 EKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIV 624

Query: 491 VELICRGRKLLFAFELLDELVIKESGT 517
           ++ + R  +   A ++  E++  +SGT
Sbjct: 625 LDGLLRAGRTSAAKKMFHEMI--DSGT 649



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 178/345 (51%), Gaps = 2/345 (0%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM- 228
           +T L  L  + + D A + L +    L   P+   +N +IK  C     + A ++++ M 
Sbjct: 163 TTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMA 222

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K+     P++++++T+I G  K G   +A  LF EMV K  ++PD  TYN ++D  C+  
Sbjct: 223 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKG-VVPDVGTYNSIVDALCKAR 281

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            +D+A+ ++  M + G  P+   Y  +++G+   G  +E+ ++F +M +  L PDT+ ++
Sbjct: 282 AMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFS 341

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           + ++  C+ GR  +A E+ + M  +G   DIV+++I+L G   EG+  +   +   +   
Sbjct: 342 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK 401

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           GI  N     I+++   ++G +++A+ +   M  +G  P+  T + L+   C+ G   DA
Sbjct: 402 GIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADA 461

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                 ++ +G +P +  +  L+   C    L+ A E + E++ K
Sbjct: 462 MEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSK 506



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 200/414 (48%), Gaps = 18/414 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN-- 135
           A EIF  ++  KG   +  +Y+ +L   A   +F  ++ +   M        +GI  N  
Sbjct: 356 AEEIFQYMT-TKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMA------DKGIVSNCH 408

Query: 136 ----LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
               L+   +   + +  + +F ++      +P++   ST ++      +  LA    K+
Sbjct: 409 CINILISAHAKRGMMDEAMLVFTEMQG-QGVRPNVVTYSTLISAFCRMGR--LADAMEKF 465

Query: 192 SNQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           S    + ++PNT +++ LI   C  G L  A E + EM    +  PN++ +S++I  LC 
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            GR  +A ++F  ++      P  +T+N LIDG+C  GK+++A  +++ M + G  P+V 
Sbjct: 526 EGRVMDAQDVFNLVIHIGD-RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 584

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
              TL++G+CK GK+ +   +F EM +  +KP T+ Y  +++   RAGR   A ++  EM
Sbjct: 585 TNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEM 644

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            + G   DI T+ I+L GLCR    +EA+ +  KL       +      ++N   +    
Sbjct: 645 IDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRR 704

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           E+A +L   +   G +P+ +T   ++  L K G  E+A      + + G  P S
Sbjct: 705 EEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/575 (22%), Positives = 243/575 (42%), Gaps = 77/575 (13%)

Query: 10  KCCRFSSFSTSSSSLPWISPLEVIKANTPKA---DPPVE--------------TSD---- 48
           + CRFSS ST+  S   + P       +P     DP V               T D    
Sbjct: 5   RLCRFSSSSTTPMSRLQLLPRRSSATTSPPLRCWDPQVAFVAAIARVRAGTFCTDDAHHL 64

Query: 49  --------TCVDARKRSRFISHGA-AISLIKCEKEPQCALEIFNTVSEQKGFNH----NN 95
                   T V  R  + F++  A A   + C   P   L +FN +  ++          
Sbjct: 65  FDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRVAPLTV 124

Query: 96  ATYATILDKLARYKKFE---AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEM 152
            TY  ++D   R ++ +   A  A L +   +T       FL  + H       E V  +
Sbjct: 125 RTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTD--EAVDVL 182

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
            H++  ++    ++   +   +L  +S   +      + + +  R  P+   FN +I   
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
            K+G +  A  +  EM +  +  P++ TY++++D LCK     +A  +  +MV K  + P
Sbjct: 243 FKQGEVSKACNLFNEMVQKGV-VPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG-VEP 300

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D +TYN +I G+   G    + K+   M + G  P+   +++ M+  CK G+ ++A+E+F
Sbjct: 301 DGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIF 360

Query: 333 DEMKNFLLKPDTIGYTTLI--------------------------NCFC---------RA 357
             M      PD + Y+ L+                          NC C         + 
Sbjct: 361 QYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKR 420

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G +DEA+ +  EM+ +G + ++VT++ ++   CR G++ +A+    ++   GI  N A Y
Sbjct: 421 GMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVY 480

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGF-LPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
             +++  C  G+L KA E +  M+ +G   P+    + ++  LC  G   DA      ++
Sbjct: 481 HSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVI 540

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            +G +P   ++  L++  C   K+  AF +LD +V
Sbjct: 541 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 575



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 166/356 (46%), Gaps = 4/356 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F  +  Q G   N  TY+T++    R  +         QM     + +  ++ +L+
Sbjct: 426 AMLVFTEMQGQ-GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLI 484

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F       +  E   ++      +P++   S+ ++ L    +V  AQ+       H+ 
Sbjct: 485 HGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV-IHIG 543

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +P    FN LI  +C  G +E AF VL  M    +  P+++T +TL+ G CK+G+  + 
Sbjct: 544 DRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE-PDVVTNNTLVSGYCKSGKIDDG 602

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + LF EM+ K ++ P  +TYN+++DG  R G+   AKK+   M ++G   ++  Y  L+ 
Sbjct: 603 LILFREMLHK-KVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 661

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C+     EA  +F ++     K D     T+IN   +  R +EA +L   +   G   
Sbjct: 662 GLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVP 721

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           ++ T+ +++  L +EG +EEA  M   +   G   +      ++    QKG++ KA
Sbjct: 722 NVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 3/241 (1%)

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV-FDE 334
           TY +L+D  CR  + D     +  +   G        TT +   C   +  EA +V    
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG--CKADIVTFNIILGGLCRE 392
           M      PD I Y T+I   C   R  EAL++++ M + G  C  D+V+FN ++ G  ++
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G++ +A  +  ++   G+  +  +Y  +++  C+   ++KA  +LR M+ +G  P   T 
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           N ++     +G  +++A     +   G  P++ +++  +  +C+  +   A E+   +  
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTT 365

Query: 513 K 513
           K
Sbjct: 366 K 366


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 168/312 (53%), Gaps = 13/312 (4%)

Query: 216 GTLESAFEVLKEMKKSQMSYP------------NLITYSTLIDGLCKNGRFREAIELFEE 263
           G+L +  E   + +K Q+ +             N+   + ++ GLC+NG   EA+ L  E
Sbjct: 110 GSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIRE 169

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  +  + PD ++YN LI+G C+  K+  A  ++  M+  GC PN    TTLM+G CK+G
Sbjct: 170 M-GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDG 228

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++ EA E+ + MK      D + Y TLI+ FC  G +D   EL  EM  +G  A++VT++
Sbjct: 229 RMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYS 288

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ GLCR G+ +EA  +L  +   GI+ +  +Y  +++  C+ G    A++LL LM+ +
Sbjct: 289 CLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK 348

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G  P   T N LL  LCK G+  DA   L  ++E G K +  ++  L++ +C   K+  A
Sbjct: 349 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 408

Query: 504 FELLDELVIKES 515
            +L + +   E+
Sbjct: 409 LKLFNSMFDNEN 420



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 206/410 (50%), Gaps = 39/410 (9%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TYET-----CK----FH 129
           KG + N  TY+ ++  L R  +++  + VL  M          TY       CK     H
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337

Query: 130 EGIFLNLM----KHFSNCSLH---------ERVLEMFHKIHPITRE--KPSLKAISTCLN 174
               LNLM    +  SN + +           V++ F  +  +  +  K  +   +T + 
Sbjct: 338 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 397

Query: 175 LLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
            L +  +VD A       + N++  L+PN   FN+LI   CK G L  A ++ ++M K +
Sbjct: 398 GLCDKGKVDEALKLFNSMFDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK-K 455

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            S  NL+TY+ L+ G  K G+ +EA+EL+++++     +P++ TY++LIDGFC+   ++ 
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG-FVPNSFTYSILIDGFCKMRMLNI 514

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           AK +   M+ +G NP +F+Y TLM   CKEG L++AK +F EM N   +PD I + T+I+
Sbjct: 515 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 574

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              +AG      EL  +M E G + D +TF+ ++  L + G+++EA   LE++   G   
Sbjct: 575 GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTP 634

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +   Y  +L     KG+  + I LL  M  +G +      + +L  LC +
Sbjct: 635 DALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 684



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 172/319 (53%), Gaps = 10/319 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +  N   ++ L+   C+ G  + A  VL  M +  + +P+++TY+ LIDGLCK+GR   A
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI-HPDVVTYTGLIDGLCKDGRATHA 338

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           ++L   MV K +  P  +TYNVL+ G C+ G V  A KI+  M   G   +V  Y TLM 
Sbjct: 339 MDLLNLMVEKGEE-PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 397

Query: 318 GFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           G C +GK+ EA ++F+ M      L+P+   +  LI   C+ GR+ +A+++ ++M ++G 
Sbjct: 398 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 457

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             ++VT+N++LGG  + GKI+EA+ + +++   G   N  +Y I+++  C+   L  A  
Sbjct: 458 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKG 517

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG---FKPESDSWALLVE 492
           L   M   G  P     N L+  LCK G  E A  +LF   EMG    +P+  S+  +++
Sbjct: 518 LFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK-SLF--QEMGNANCEPDIISFNTMID 574

Query: 493 LICRGRKLLFAFELLDELV 511
              +     F  EL  ++V
Sbjct: 575 GTLKAGDFQFVKELQMKMV 593



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 203/428 (47%), Gaps = 8/428 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N+ T  T++D L +  + +    +L  M  +       ++  L+  F N    
Sbjct: 206 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 265

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
           +R  E+F ++  + +   +     +CL + L    Q   A   L    +H  + P+   +
Sbjct: 266 DRGKELFDEM--LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEH-GIHPDVVTY 322

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI   CK G    A ++L  M + +   P+ +TY+ L+ GLCK G   +A ++   M+
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVE-KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 381

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNGC-NPNVFNYTTLMNGFCKEG 323
            K +   D +TYN L+ G C  GKVD A K+   M  N  C  PNVF +  L+ G CKEG
Sbjct: 382 EKGKK-ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 440

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           +L +A ++  +M       + + Y  L+    +AG++ EA+EL K++ + G   +  T++
Sbjct: 441 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++ G C+   +  A G+  ++   G+      Y  ++   C++G LE+A  L + M   
Sbjct: 501 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 560

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
              P   + N ++    KAG  +        +VEMG +P++ +++ L+  + +  +L  A
Sbjct: 561 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620

Query: 504 FELLDELV 511
              L+ +V
Sbjct: 621 KSALERMV 628



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 142/278 (51%), Gaps = 1/278 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+  T + L+D L ++  +  A  ++  M   D +LP   + + LI+ F    K      
Sbjct: 72  PSWATCNFLVDALARSRNYGLAFSVYRRMTHVD-VLPSFGSLSALIECFADAQKPQLGFG 130

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   G   NVF    ++ G C+ G + EA  +  EM    + PD + Y TLIN  C
Sbjct: 131 VVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLC 190

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           +A ++ EA+ LL EM+  GC  + VT   ++ GLC++G+++EA+ +LE +   G   +  
Sbjct: 191 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVV 250

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  +++  C  G L++  EL   ML +G   +  T + L+  LC+ G  ++A   L  +
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            E G  P+  ++  L++ +C+  +   A +LL+ +V K
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK 348


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 168/312 (53%), Gaps = 12/312 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N L+  +C+ G+L  A  VL+  + S  +  N++TY+ LIDG C++GR  +A+ L   M 
Sbjct: 157 NTLVAGYCRDGSLWDAERVLEAARASGAA--NVVTYTALIDGYCRSGRLTDALRLIASM- 213

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
               + PD  TYN ++ G C   + + A+++M  M  N C+PN   + T +  FC+ G L
Sbjct: 214 ---PVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLL 270

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A E+ ++M  +   PD + Y+TL+N F   GRVD+AL+LL  M    C+ + V +N  
Sbjct: 271 DRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAA 327

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC  G+ +E   ++ ++       N A++  ++N  CQ    E AIE+L  M   G+
Sbjct: 328 LKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGY 387

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
           +P   + N ++    +   A+D   AL  L  M  KP++ S+  +++ +CR  +   A E
Sbjct: 388 MPDVVSYNTIISCFSEQACADD---ALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAE 444

Query: 506 LLDELVIKESGT 517
           L+ +++ ++  T
Sbjct: 445 LMAKMLKEDCHT 456



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 196/434 (45%), Gaps = 70/434 (16%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+L  L   K++E  + ++R+M    C  +E  F   ++ F    L +R +E+  ++
Sbjct: 221 TYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 280

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS---------NQHLR---------- 197
            P     P +   ST +N   E  +VD A   L            N  L+          
Sbjct: 281 -PKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDE 339

Query: 198 ------------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK--------------- 230
                         PN   F+ LI   C+    E A EVL++M+K               
Sbjct: 340 VGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIIS 399

Query: 231 ----------------SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
                           S +  P+ I+++ ++  LC+  R+ +A EL  +M+ +D    + 
Sbjct: 400 CFSEQACADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKED-CHTNE 458

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +T+N+LID  C+ G+V  A ++ E M    C P++  Y++L+NGF ++G     K  FD 
Sbjct: 459 MTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGL---DKVAFDL 515

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
            ++   + D   Y   +   C A R D+A EL+ +M  + C  + VTFNI++  LC++G 
Sbjct: 516 FRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGL 575

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +  A+ + E++   GI  +  +Y  ++N   ++G L+ A++ L  M C    P   + N 
Sbjct: 576 VNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE---PDTISYNS 632

Query: 455 LLVRLCKAGMAEDA 468
           +L  LC+A   +DA
Sbjct: 633 ILKGLCRAERWKDA 646



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 172/351 (49%), Gaps = 40/351 (11%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+T  +N ++K  C     E A E+++EM ++   +PN +T++T I   C+NG   
Sbjct: 213 MPVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNN-CHPNEVTFATQIRAFCQNGLLD 271

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF---------------- 299
            A+EL E+M  K   +PD + Y+ L++GF   G+VD A K++                  
Sbjct: 272 RAVELLEQM-PKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKG 330

Query: 300 ----------------MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
                           M    C PN   ++TL+N  C+    + A EV ++M+ +   PD
Sbjct: 331 LCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPD 390

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y T+I+CF      D+AL+LL  M    CK D ++FN +L  LCR  +  +A  ++ 
Sbjct: 391 VVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMA 447

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+  +  + N+ ++ I+++  CQ G+++ AIE+  LM      P   T + L+    + G
Sbjct: 448 KMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQG 507

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           + +  A  LF    M  + +  S+   ++ +C   +   A EL+ ++V K+
Sbjct: 508 L-DKVAFDLFR--SMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKD 555



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 145/275 (52%), Gaps = 9/275 (3%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P +IT + LI  LC   R  +A  + E +  K     DA+++N L+ G+CR G +  A++
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEAL--KTSGAADAVSHNTLVAGYCRDGSLWDAER 174

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++E  + +G   NV  YT L++G+C+ G+L +A  +   M    + PDT  Y T++   C
Sbjct: 175 VLEAARASGA-ANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLC 230

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
            A + +EA EL++EM    C  + VTF   +   C+ G ++ A+ +LE++   G   +  
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVV 290

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  ++N   + G ++ A++LL  MLCR   P+    N  L  LC AG  ++    +  +
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEM 347

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           V     P   +++ L+  +C+ R   +A E+L+++
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM 382



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 42/357 (11%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N   Y   L  L    +++ V  ++ +M  + C  ++  F  L+       L E  +E+ 
Sbjct: 320 NTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVL 379

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            ++       P + + +T ++   E    D A   LK  N  L  KP+T  FN ++K  C
Sbjct: 380 EQMQKYGY-MPDVVSYNTIISCFSEQACADDA---LKLLNSML-CKPDTISFNAVLKCLC 434

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           +      A E++ +M K    + N +T++ LID LC+NG+ ++AIE+FE ++ K +  PD
Sbjct: 435 RAERWYDAAELMAKMLKED-CHTNEMTFNILIDSLCQNGQVKDAIEMFE-LMPKYRCTPD 492

Query: 274 ALTYNVLIDGF--------------------------------CRGGKVDRAKKIMEFMK 301
            +TY+ LI+GF                                C   + D A +++  M 
Sbjct: 493 IVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMV 552

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
              C PN   +  L+N  C++G +  A EV+++M  + + PD   Y  LIN +   G +D
Sbjct: 553 TKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLD 612

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           +AL+ L  M    C+ D +++N IL GLCR  + ++A  ++ ++       N+ +++
Sbjct: 613 DALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 666


>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
 gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 220/489 (44%), Gaps = 53/489 (10%)

Query: 57  SRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA 116
           S+ IS    +  ++  K P   L  F+ VS  KGF+H   ++  +L+ L R +       
Sbjct: 63  SQTISRTTVLQTLRLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARN 121

Query: 117 VLRQMTYET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
            L  +   +    K  +  F +L++ + N  L +  +++F  +  +    PS+   ++ L
Sbjct: 122 FLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS-PSVLTFNSLL 180

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM 233
           ++L++  +  +A +      +   + P++  FN LI   CK   ++ AF + K+M+    
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240

Query: 234 SYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK-DQILPDALTYNVLIDGFCRGGKVDR 292
           + P+++TY+T+IDGLC+ G+ + A  +   M+ K   + P+ ++Y  L+ G+C   ++D 
Sbjct: 241 N-PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDE 299

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGF--------------------------------- 319
           A  +   M + G  PN   Y TL+ G                                  
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNIL 359

Query: 320 ----CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-- 373
               C  G L  A +VF EM N  L PD+  Y+ LI   C     D A  L  E+ E+  
Sbjct: 360 IKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEV 419

Query: 374 -----GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
                 CK     +N +   LC  GK ++A  +  +L   G+  +  SY+ ++   C++G
Sbjct: 420 LLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREG 478

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW- 487
           + + A ELL LML R F+P   T   L+  L K G A  A   L  ++   + P + ++ 
Sbjct: 479 KFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFH 538

Query: 488 ALLVELICR 496
           ++L EL  R
Sbjct: 539 SVLAELAKR 547



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 190/392 (48%), Gaps = 54/392 (13%)

Query: 173 LNLLIESNQVDLAQNFL----KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           L  L  +  +++A+NFL    + SN  ++L+     FN LI+ +   G  + + ++ + M
Sbjct: 107 LEFLGRARNLNVARNFLFSIERRSNGCVKLQDR--YFNSLIRSYGNAGLFQESVKLFQTM 164

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K+  +S P+++T+++L+  L K GR   A +LF+EM     + PD+ T+N LI+GFC+  
Sbjct: 165 KQMGIS-PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIG 346
            VD A +I + M+   CNP+V  Y T+++G C+ GK++ A  V   M  K   + P+ + 
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS 283

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL----------------- 389
           YTTL+  +C    +DEA+ +  +M  RG K + VT+N ++ GL                 
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343

Query: 390 --------------------CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
                               C  G ++ A+ + +++    ++ + ASY +++   C + E
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403

Query: 430 LEKAIELLRLMLCRGFL-------PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
            ++A  L   +  +  L       P  A  N +   LC  G  + A      L++ G + 
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ- 462

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +  S+  L+   CR  K   A+ELL  ++ +E
Sbjct: 463 DPPSYKTLITGHCREGKFKPAYELLVLMLRRE 494



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 202/435 (46%), Gaps = 27/435 (6%)

Query: 92  NHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSLHERV 149
           N +  TY TI+D L R  K +    VL  M  +    H  +  +  L++ +      +  
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA 300

Query: 150 LEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNI 207
           + +FH +  ++R  KP+    +T +  L E+++ D  ++ L   N       P+ C FNI
Sbjct: 301 VLVFHDM--LSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNI 358

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM--- 264
           LIK HC  G L++A +V +EM   ++ +P+  +YS LI  LC    F  A  LF E+   
Sbjct: 359 LIKAHCDAGHLDAAMKVFQEMLNMKL-HPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417

Query: 265 ---VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFC 320
              + KD+  P A  YN + +  C  GK  +A+K+  + MK    +P   +Y TL+ G C
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP--SYKTLITGHC 475

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +EGK + A E+   M      PD   Y  LI+   + G    A + L+ M          
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535

Query: 381 TFNIILGGLCREGKIEEALG----MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           TF+ +L  L +     E+      MLEK     I L+    R++ + S QK   EKA  +
Sbjct: 536 TFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFS-SAQK---EKAFLI 591

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           +RL+   G+L       ELL  LC+     DA   +   +E     + D+   ++E +C+
Sbjct: 592 VRLLYDNGYL---VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCK 648

Query: 497 GRKLLFAFELLDELV 511
            ++   AF L +ELV
Sbjct: 649 HKRHSEAFSLYNELV 663


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 224/441 (50%), Gaps = 19/441 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-------TYETCKFHE 130
           AL++FN ++++ G   N  TY+T+++ L    +      ++R+M       T  TC    
Sbjct: 439 ALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT--- 494

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           G  + L     +   +E    +F  +     E P++   +  ++ L  S  + +A     
Sbjct: 495 GPIIAL----CDMGCYEDAWRLFVDMKNKGCE-PNVYTYTALISGLCVSGLLKVAIGLFH 549

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
             ++   + PNT  +N LI    +   ++ AF VL  M ++ + + N++TY+ +I G C 
Sbjct: 550 RMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL-FTNIVTYNEMIKGYCI 607

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G  ++A+ +   M+ +     + +TYN +I G+C  G    A +I++ M++ GC P+ +
Sbjct: 608 LGDPKKAMLVMNNMLQRGHS-ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 666

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +YT L+ GFCK  K++ A  +F+EM +  L P+ + YT LI+ +C+  ++D A  LL+ M
Sbjct: 667 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 726

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           K  GC+ ++ T+N+++ GL ++     A  + + +  +GI+ N  +Y  +++  C+ G  
Sbjct: 727 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 786

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+E+   M+ +G LP+  T + L+  L + G  E+A      L   G  P+  ++  +
Sbjct: 787 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 846

Query: 491 VELICRGRKLLFAFELLDELV 511
           +E      K+  AF  L  ++
Sbjct: 847 IEAYIMSGKVEHAFNFLGRMI 867



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 209/437 (47%), Gaps = 22/437 (5%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q  L I+N V      + N A   TI+ K+     FE+      +M+ +T  +   I  +
Sbjct: 382 QPNLLIYNAVINALCKDGNVADAETIMKKV-----FES------EMSPDTFTYTSMILGH 430

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             KH  + +L     ++F+++     E P+    ST +N L +S +V+ A + ++    H
Sbjct: 431 CRKHDLDSAL-----QVFNQMAKEGCE-PNTVTYSTLINGLCDSGRVNEAFDLIREMILH 484

Query: 196 LRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
             L   +TC   I+    C  G  E A+ +  +MK      PN+ TY+ LI GLC +G  
Sbjct: 485 GILPTAHTCTGPIIAL--CDMGCYEDAWRLFVDMKNKGCE-PNVYTYTALISGLCVSGLL 541

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           + AI LF  M S+D + P+ +TYN LI+      ++  A  ++  M  NG   N+  Y  
Sbjct: 542 KVAIGLFHRM-SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNE 600

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           ++ G+C  G  ++A  V + M       + + Y T+I  +C +G    AL +L  M++ G
Sbjct: 601 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 660

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           CK D  ++  ++ G C+  K+E A G+  ++  DG+  N+ +Y  +++  C+  +L+ A 
Sbjct: 661 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 720

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
            LL  M   G  P+  T N L+  L K      A      ++E G  P   ++  +++ +
Sbjct: 721 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 780

Query: 495 CRGRKLLFAFELLDELV 511
           C+      A E+ ++++
Sbjct: 781 CKNGSTSLALEMFNKMI 797



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 136/256 (53%), Gaps = 2/256 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +N +IK +C  G   SA  +L  M+      P+  +Y+ LI G CK  +   A  L
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK-PDEWSYTELICGFCKISKMESAFGL 687

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F EMV  D + P+ +TY  LIDG+C+  K+D A  ++E MK +GC PNV  Y  L++G  
Sbjct: 688 FNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 746

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+     A+E+   M    + P+ + YT +I+  C+ G    ALE+  +M E+GC  +++
Sbjct: 747 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 806

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++  L +EGK+EEA  +  +L   G+  ++ +Y  ++      G++E A   L  M
Sbjct: 807 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 866

Query: 441 LCRGFLPHYATSNELL 456
           +  G  P   T   L+
Sbjct: 867 IKAGCQPTLWTYGVLI 882



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 150/304 (49%), Gaps = 2/304 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ L+ H  + G   +  +    M  S+   PNL+ Y+ +I+ LCK+G   +A E   + 
Sbjct: 353 YSALLIHLSRLGMTAAVMDRYHRML-SEGVQPNLLIYNAVINALCKDGNVADA-ETIMKK 410

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V + ++ PD  TY  +I G CR   +D A ++   M   GC PN   Y+TL+NG C  G+
Sbjct: 411 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 470

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + EA ++  EM    + P     T  I   C  G  ++A  L  +MK +GC+ ++ T+  
Sbjct: 471 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 530

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLC  G ++ A+G+  ++  DG++ N  +Y  ++N   +   ++ A  +L LM   G
Sbjct: 531 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 590

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
              +  T NE++   C  G  + A + +  +++ G      ++  +++  C       A 
Sbjct: 591 LFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 650

Query: 505 ELLD 508
            +LD
Sbjct: 651 RILD 654



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F +M+S+  +      Y+ L+    R G           M + G  PN+  Y  ++N  C
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+G + +A+ +  ++    + PDT  YT++I   CR   +D AL++  +M + GC+ + V
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ ++ GLC  G++ EA  ++ ++   GI     +    +   C  G  E A  L   M
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRK 499
             +G  P+  T   L+  LC +G+ +  AI LF  +   G  P + ++  L+ ++   R+
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLK-VAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 500 LLFAFELLD 508
           + +AF +L+
Sbjct: 576 IKYAFVVLN 584



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 196/447 (43%), Gaps = 29/447 (6%)

Query: 74   EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
            +P+ A+ + N +  Q+G + N  TY TI+          +   +L  M    CK  E  +
Sbjct: 610  DPKKAMLVMNNML-QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 668

Query: 134  LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
              L+  F   S  E    +F+++       P+    +  ++   +  ++D A + L++  
Sbjct: 669  TELICGFCKISKMESAFGLFNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 727

Query: 194  QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            +    +PN   +N+LI    K+     A E+ K M +  + +PN++TY+ +IDGLCKNG 
Sbjct: 728  RS-GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI-FPNVVTYTAMIDGLCKNGS 785

Query: 254  FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
               A+E+F +M+ +   LP+ LTY+ LI    + GKV+ A+ +   ++ +G  P+   Y 
Sbjct: 786  TSLALEMFNKMIEQG-CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYV 844

Query: 314  TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI---------------------- 351
             ++  +   GK++ A      M     +P    Y  LI                      
Sbjct: 845  KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVP 904

Query: 352  NC-FCRAGRVDEALELLK-EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
            NC F       +A+ ++  ++ E      +   N ++  L   G+  EA  +L  +   G
Sbjct: 905  NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 964

Query: 410  IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
            +  ++ +Y  +L    +   ++ A+ + + M  +G   H     EL+  LC+    ++A 
Sbjct: 965  LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEAR 1024

Query: 470  IALFGLVEMGFKPESDSWALLVELICR 496
            I    ++   + P+    A+L++ + R
Sbjct: 1025 ITFENMLMRTWNPDDVVQAVLIDGLLR 1051



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 100/219 (45%)

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
           R    ++ +  +G    +F Y+ L+    + G      + +  M +  ++P+ + Y  +I
Sbjct: 333 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 392

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           N  C+ G V +A  ++K++ E     D  T+  ++ G CR+  ++ AL +  ++  +G  
Sbjct: 393 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 452

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            N  +Y  ++N  C  G + +A +L+R M+  G LP   T    ++ LC  G  EDA   
Sbjct: 453 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 512

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +   G +P   ++  L+  +C    L  A  L   +
Sbjct: 513 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 126/301 (41%), Gaps = 26/301 (8%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            ALE+FN + EQ G   N  TY++++  L +  K E  + +  ++        E  ++ ++
Sbjct: 789  ALEMFNKMIEQ-GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 847

Query: 138  KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
            + +    +  +V   F+ +  + +   +P+L      +  L         +N    ++Q 
Sbjct: 848  EAYI---MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL---------KNEYLLADQR 895

Query: 196  LRLKPNTCIFNILIKHHCKRG---TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            L   P+       +  +C  G   T + A  V+           ++   + L+  L   G
Sbjct: 896  LAALPD-------VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 948

Query: 253  RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
            R+ EA EL   M+S+  + PD   YN L+    R   VD A  + + M   GC  ++  Y
Sbjct: 949  RWFEANELLGSMISQG-LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGY 1007

Query: 313  TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
              L+   C+  + +EA+  F+ M      PD +    LI+   R G  D  +E L  M+ 
Sbjct: 1008 KELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMET 1067

Query: 373  R 373
            R
Sbjct: 1068 R 1068



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/149 (17%), Positives = 67/149 (44%)

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           +  L  + + G +  +  ++ +L  L R G     +    ++  +G+  N   Y  V+N 
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G +  A  +++ +      P   T   +++  C+    + A      + + G +P 
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVI 512
           + +++ L+  +C   ++  AF+L+ E+++
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMIL 483



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 2/118 (1%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            L P+   +N L+    +   ++ A  V K M  +Q    +L  Y  LI  LC+  R +EA
Sbjct: 965  LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS-TQGCEVHLNGYKELICALCQLHRRKEA 1023

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
               FE M+ +    PD +   VLIDG  R G  D   + +  M+     P+   YT L
Sbjct: 1024 RITFENMLMRTWN-PDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 226/514 (43%), Gaps = 83/514 (16%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC---KFHE 130
           +P+  L  F+    + G  HN  +    LD L R  + +   A+ R      C   KF  
Sbjct: 3   KPELVLLFFDWARSRVG--HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTY 60

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           GI   L++ FS+    +  +++  ++     E  ++   +    L      V+  ++F  
Sbjct: 61  GI---LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA 117

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            +       P+   +  L+   CK G  + A  +L+EM  +Q   P+ +T+STLIDGLCK
Sbjct: 118 MAKD---CAPDVMTYTALVHALCKAGKFDEAQGMLREMV-AQGCAPDTVTFSTLIDGLCK 173

Query: 251 NGRFREAIELFEEMVSKDQ-----------------------------------ILPDAL 275
            G   +A  + E+++ +                                       P  L
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
            +N++I+GFC+   +D A K++E M   GC PNVF +T L+ G CK  ++ EA+++ ++M
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                 P+ + Y+T+IN  C+ G+VD+A EL + M+ R C  ++VT NI++ GLC+  +I
Sbjct: 294 VMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 353

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR----------------- 438
           EEA  +  ++   G   +  +Y  +++  C+  ++++A +L +                 
Sbjct: 354 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 413

Query: 439 -------------------LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
                              +++ +GF P  AT   L++  CK   A +    +  +   G
Sbjct: 414 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 473

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           F P  ++ + ++  +  G     A +L D +  +
Sbjct: 474 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 507



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 206/420 (49%), Gaps = 8/420 (1%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY  ++  L +  KF+    +LR+M  + C      F  L+         E+   +   +
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 157 HPITREKP-SLKAISTCLNLLIES-NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
             I R    S  A  T +  L    N V+LA   L          P   +FN++I   CK
Sbjct: 188 --IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK-GFTPTVLMFNLVINGFCK 244

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
              L+SA+++L+ M + +   PN+ T++ LI GLCK  R  EA +L E+MV      P+ 
Sbjct: 245 AKDLDSAYKLLEVMIE-KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV-MGGCSPNV 302

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +TY+ +I+G C+ G+VD A ++ + M+   C PNV  +  L++G CK  +++EA++++  
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA-DIVTFNIILGGLCREG 393
           M+     PD I Y +LI+  C++ +VDEA +L + + E G  A + VT++ +  G    G
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++ +A  +   L   G   + A+Y  ++   C+     + +EL+  M  +GF P   T +
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +L  L +    E A      +   G   ++  + L+VE + R  K   A  +L++++ K
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 216/432 (50%), Gaps = 15/432 (3%)

Query: 88  QKGFNHNNATYATILDKLA-RYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           Q+G  +++A + TI+ +L  +Y   E    VL  +  +       +F  ++  F  C   
Sbjct: 189 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF--CKAK 246

Query: 147 ERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  L+  +K+  +  EK   P++   +  +  L ++N+V  AQ  L+         PN  
Sbjct: 247 D--LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMG-GCSPNVV 303

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            ++ +I   CK+G ++ A+E+ + M++     PN++T++ LIDGLCK  R  EA +L+  
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRNCP-PNVVTHNILIDGLCKAKRIEEARQLYHR 362

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP-NVFNYTTLMNGFCKE 322
           M  +    PD +TYN LIDG C+  +VD A ++ + +  +G +  N   Y+TL +G+   
Sbjct: 363 M-RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAAL 421

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G++ +A  +F  + +    PD   YT+LI  +C+  R  E +EL++EM  +G    + T 
Sbjct: 422 GRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           + +LGGL      E A+ + + +   G   +   Y +V+    +  + +KA+ +L  ++ 
Sbjct: 482 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVID 541

Query: 443 ---RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
              R F P  +  + L+  LC+ G  +DA   L  + E GF     S+  L+  + R ++
Sbjct: 542 KRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQR 601

Query: 500 LLFAFELLDELV 511
              A ++ + +V
Sbjct: 602 WDEATQVFEAMV 613



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 202/425 (47%), Gaps = 6/425 (1%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF      +  +++   + K  ++   +L  M  + C  +   F  L+      +    
Sbjct: 226 KGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGE 285

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
             ++  K+  +    P++   ST +N L +  QVD A    +   +     PN    NIL
Sbjct: 286 AQQLLEKM-VMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERR-NCPPNVVTHNIL 343

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK   +E A ++   M+++  + P++ITY++LIDGLCK+ +  EA +LF+ +    
Sbjct: 344 IDGLCKAKRIEEARQLYHRMRETGCA-PDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG 402

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
               +A+TY+ L  G+   G++  A +I   + + G +P++  YT+L+  +CK  +  E 
Sbjct: 403 VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEV 462

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            E+ +EM +    P     + ++         + A++L   M  RGC  D + +N+++ G
Sbjct: 463 VELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 522

Query: 389 LCREGKIEEALGMLEKLW--YDGIYLNKASYRIVLNFS-CQKGELEKAIELLRLMLCRGF 445
           + R  K ++AL +LE++    D  +   +S    L  S CQ G+ + A +LL  M  RGF
Sbjct: 523 MARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGF 582

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
               ++ N LL  L +    ++A      +V  G  PE  +  +++  +C   K+  A+E
Sbjct: 583 AAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYE 642

Query: 506 LLDEL 510
           L+  +
Sbjct: 643 LVQRM 647



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/404 (21%), Positives = 161/404 (39%), Gaps = 76/404 (18%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + N  TY+T+++ L +  + +    + + M    C  +      L+         E  
Sbjct: 297 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 356

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            +++H++   T   P +   ++ ++ L +S QVD A    +   +      N   ++ L 
Sbjct: 357 RQLYHRMRE-TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF--------------- 254
             +   G +  A  +   +     S P+L TY++LI   CK  R                
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFS-PDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 474

Query: 255 --------------------REAIELFEEMVSKDQILPDALTYNVLIDG----------- 283
                                 AI+LF+ M ++     DAL YN++++G           
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG-CTDDALIYNLVVEGMARASKHDKAL 533

Query: 284 ---------------------------FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
                                       C+ GK D AK+++  M   G    V +Y  L+
Sbjct: 534 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLL 593

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G  +  +  EA +VF+ M +    P+      +I+  C A +VD+A EL++ M + GC 
Sbjct: 594 SGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCC 653

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            DI T N ++GG C+ G+ + A  +LE++   G+  N  ++ ++
Sbjct: 654 PDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 1/166 (0%)

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           ++  CR  R  EAL L +    R C  +  T+ I++ G    G ++ A+ +LE++   G 
Sbjct: 29  LDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGF 88

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N   +  ++   C  G + +A+E  R M  +   P   T   L+  LCKAG  ++A  
Sbjct: 89  EGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQG 147

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
            L  +V  G  P++ +++ L++ +C+      AF +L++++ +  G
Sbjct: 148 MLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMG 193


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 166/314 (52%), Gaps = 1/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +   I   CKR  ++ AF VL+EM    +  PN+ T++TLIDGLCK G    A  
Sbjct: 141 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK-PNVYTHTTLIDGLCKIGWTERAFR 199

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF +++      P+  TY V+I G+CR GK+ RA+ ++  M   G  PN   YTTL+ G 
Sbjct: 200 LFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGH 259

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G    A E+ ++MK     P+   Y  +I+ FC+ G++ EA ++L+    +G K D 
Sbjct: 260 CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDK 319

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +T+ I++   C++G I  AL + +++  +G   +  +Y  +++  CQ+ ++E++ +    
Sbjct: 320 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 379

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            L  G LP   T   ++   CK G +  A      +V+ G   +S ++  L+  +C+  +
Sbjct: 380 CLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESR 439

Query: 500 LLFAFELLDELVIK 513
           L  A  L + ++ K
Sbjct: 440 LEEAKALYEGMLDK 453



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 199/433 (45%), Gaps = 4/433 (0%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+ ++ + G +  N  +  ++    R  K E VDA+L  M              ++
Sbjct: 57  ARKVFDGMT-RAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVV 115

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           +        + V E F ++   T   P++   +  ++ L +   V  A + L+       
Sbjct: 116 RSLCEKGRFKDVSEFFRRMLE-TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLE-EMVGRG 173

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN      LI   CK G  E AF +  ++ KS    PN+ TY+ +I G C+ G+   A
Sbjct: 174 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 233

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L   MV +  + P+  TY  LI G C+GG  DRA ++M  MK  G  PN++ Y  +++
Sbjct: 234 EMLLVRMVEQG-LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 292

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK+GK+QEA +V     +  LK D I YT LI   C+ G +  AL+L   M E GC  
Sbjct: 293 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 352

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI  +  ++   C++ ++EE+    +K    G+   K +Y  ++   C+ G    A+ + 
Sbjct: 353 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 412

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M+  G      T   L+  LCK    E+A     G+++    P   +   L    CR 
Sbjct: 413 ERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRR 472

Query: 498 RKLLFAFELLDEL 510
            K   A  +LD L
Sbjct: 473 EKTSIAVSVLDRL 485



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 184/460 (40%), Gaps = 90/460 (19%)

Query: 44  VETSDTCVDARKRSRFISHGAAISLIK---CEKEPQCALEIFNTVSE------QKGFNHN 94
           VE  D  + A  R  F    A  +++    CEK        F  VSE      + G   N
Sbjct: 89  VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR------FKDVSEFFRRMLETGTPPN 142

Query: 95  NATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
              Y   +D L + +  +    VL +M     K +      L+         ER   +F 
Sbjct: 143 VVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFL 202

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
           K+   +  KP++   +  +       ++  A+  L    +   LKPNT  +  LI  HCK
Sbjct: 203 KLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ-GLKPNTNTYTTLIGGHCK 261

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE------------------ 256
            G+ + AFE++ +MK+     PN+ TY+ +IDG CK G+ +E                  
Sbjct: 262 GGSFDRAFELMNKMKQEGF-LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKI 320

Query: 257 -----------------AIELFEEMVSKD------------------------------- 268
                            A++LF+ MV                                  
Sbjct: 321 TYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKC 380

Query: 269 ---QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
               +LP   TY  +I G+C+ G+   A ++ E M  NGC  +   Y  L++G CKE +L
Sbjct: 381 LMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRL 440

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +EAK +++ M +  L P  +   TL   +CR  +   A+ +L  + +R     + T +++
Sbjct: 441 EEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR---QQVHTVDVV 497

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           +  L   G ++ A   L+K+  +   ++ A+Y   +N SC
Sbjct: 498 VRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFIN-SC 536



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 1/233 (0%)

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           ++  F   G++  A  ++  M+++G    V     ++    + G    A++VFD M    
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           + P   G+  L+   CR G+V+E   LL  M   G   D  T  +++  LC +G+ ++  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
               ++   G   N  +Y   ++  C++  +++A  +L  M+ RG  P+  T   L+  L
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 460 CKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           CK G  E A      L++   +KP   ++ +++   CR  KL  A  LL  +V
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMV 241


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 217/442 (49%), Gaps = 11/442 (2%)

Query: 44  VETSDTCVDA-RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATIL 102
           +ET +   DA  K + F+S      +++ ++ P+     F   + ++ F  +  T+  ++
Sbjct: 45  METVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVI 103

Query: 103 DKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE 162
           D LA+   F+    +L ++     +     F  L+  ++   + E+ +E F K+      
Sbjct: 104 DMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGC- 162

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLES 220
           KP +   ++ L+++++     LA   L   NQ L+L   PN   F IL+   CK G  + 
Sbjct: 163 KPDVFTYNSILHVMVQKEVFLLA---LAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDD 219

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A ++  EM +  +  PN + Y+ ++ GLC+  R  +   L   M       PD++T N L
Sbjct: 220 ALKMFDEMTQKGIP-PNTMIYTIILSGLCQAKRTDDVHRLLNTM-KVSGCCPDSITCNAL 277

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           +DGFC+ G++D A  +++  +  G    +  Y++L++G  +  +  E +E   +M    +
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           +PD + YT LI  FC  G VD AL +L +M +RG   D   +N ++ G C  G +++A  
Sbjct: 338 EPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARS 397

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +  ++  +  +    +Y I++   C+ G L++A ++   M   G  P   T N L+  LC
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLC 457

Query: 461 KAGMAEDAAIALFGLVEMGFKP 482
           KAG  E+A   LF  +E+G  P
Sbjct: 458 KAGELEEAR-HLFYKMEIGKNP 478



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 212/456 (46%), Gaps = 25/456 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ ++ QKG   N   Y  IL  L + K+ + V  +L  M    C         L+
Sbjct: 220 ALKMFDEMT-QKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSL--KAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             F  C L + + E F  +    +E   L  K  S+ ++ L  + + D  Q + +   + 
Sbjct: 279 DGF--CKLGQ-IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA 335

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             ++P+  ++ ILI+  C+ G ++ A  +L +M +  +S P+   Y+ LI G C  G   
Sbjct: 336 -GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS-PDTYCYNALIKGFCDVGLLD 393

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  L  E +SK+   P + TY +LI G CR G +D A++I   M+N GC+P++  +  L
Sbjct: 394 KARSLQLE-ISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNAL 452

Query: 316 MNGFCKEGKLQEAKEVFDEM---KN---FL-LKPDTIGYTTLINCFCRAGRVDEALELLK 368
           ++G CK G+L+EA+ +F +M   KN   FL L           N F R  R ++A  +L 
Sbjct: 453 IDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLD 512

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS---C 425
           +M + GC      +  ++   CR+GK+  A      LW   +    +     L  +    
Sbjct: 513 QMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFS----LWLKYLRSLPSQEDETLKLAEEHF 568

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           +KGELEKA+  L  M  +      A     L+ LC+A  +E+A      L E        
Sbjct: 569 EKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPP 628

Query: 486 SWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           S  +L+  +C+   L  A ++   L   E G + +P
Sbjct: 629 SCVMLINGLCKDGNLEMAVDIF--LYTLEKGFMLMP 662



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 189/409 (46%), Gaps = 26/409 (6%)

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           L+KLA +   E V+ V+R+       F   I+    + F +   H  V++M  K      
Sbjct: 55  LEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDD---- 110

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
                    T   +L E              N ++++ P T  F++LI  + K G  E A
Sbjct: 111 ------GFDTYWKILEE------------LKNSNIQIPPPT--FSVLIAAYAKSGMAEKA 150

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E   +MK      P++ TY++++  + +   F  A+ ++ +M+ K    P+  T+ +L+
Sbjct: 151 VESFGKMKDFGCK-PDVFTYNSILHVMVQKEVFLLALAVYNQML-KLNYNPNRATFVILL 208

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           +G C+ GK D A K+ + M   G  PN   YT +++G C+  +  +   + + MK     
Sbjct: 209 NGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCC 268

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD+I    L++ FC+ G++DEA  LL+  ++ G    I  ++ ++ GL R  + +E    
Sbjct: 269 PDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEW 328

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
             K++  GI  +   Y I++   C+ G ++ A+ +L  M  RG  P     N L+   C 
Sbjct: 329 CRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCD 388

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G+ + A      + +    P S ++ +L+  +CR   L  A ++ +++
Sbjct: 389 VGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM 437



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 185/409 (45%), Gaps = 63/409 (15%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E++G+      Y++++D L R K+++ V    R+M     +    ++  L++ F    + 
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMV 357

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNT 202
           +  L M + +      +  L   + C N LI+       +D A++ L+         P +
Sbjct: 358 DYALNMLNDM-----TQRGLSPDTYCYNALIKGFCDVGLLDKARS-LQLEISKNDCFPTS 411

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
           C + ILI   C+ G L+ A ++  +M+    S P+++T++ LIDGLCK G   EA  LF 
Sbjct: 412 CTYTILICGMCRNGLLDEARQIFNQMENLGCS-PSIMTFNALIDGLCKAGELEEARHLFY 470

Query: 263 EM-VSKDQILPDALTYNV-----LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           +M + K+  L   L+          +GF R  + + A ++++ M  NGC P+   Y  LM
Sbjct: 471 KMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 530

Query: 317 NGFCKEGKL----------------QE------AKEVFDE----------------MKNF 338
              C++GKL                QE      A+E F++                + NF
Sbjct: 531 TWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNF 590

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI--VTFNIILGGLCREGKIE 396
            + P    YT  +   C+A R +EAL++   +KE  C+ D+   +  +++ GLC++G +E
Sbjct: 591 EIAP----YTIWLIGLCQARRSEEALKIFLVLKE--CQMDVNPPSCVMLINGLCKDGNLE 644

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
            A+ +       G  L       +L     + +++ A++LL  M   G+
Sbjct: 645 MAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGY 693



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/201 (19%), Positives = 83/201 (41%), Gaps = 35/201 (17%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           +  +++   K+       ++ +E+KN  ++     ++ LI  + ++G  ++A+E   +MK
Sbjct: 99  HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           + GCK D+ T+N IL                                   +   QK    
Sbjct: 159 DFGCKPDVFTYNSIL-----------------------------------HVMVQKEVFL 183

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A+ +   ML   + P+ AT   LL  LCK G  +DA      + + G  P +  + +++
Sbjct: 184 LALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL 243

Query: 492 ELICRGRKLLFAFELLDELVI 512
             +C+ ++      LL+ + +
Sbjct: 244 SGLCQAKRTDDVHRLLNTMKV 264


>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
          Length = 332

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 148/272 (54%), Gaps = 12/272 (4%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN----------LITYSTLIDGL 248
           +PN   FN L+   C+ G +  A  ++  M + +   PN          ++  + ++D L
Sbjct: 7   RPNVVTFNTLMNSLCREGRVLEALALVDRMVE-EGHQPNAMGQSHIKADVVISTAIVDRL 65

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           CK+G    A  LF EM  K  I P+ LTYN +ID FC  G+   A +++  M     NP+
Sbjct: 66  CKDGNHINAQNLFTEMHEKG-IFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 124

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           +  ++ L+N F KE K+ EA+E++ EM  + + P TI Y ++I+ FC+  RVD+A  +L 
Sbjct: 125 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 184

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
            M  +GC  D+VTF+ ++ G C+  +++  + +  ++   GI  N  +Y  +++  CQ G
Sbjct: 185 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 244

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +L+ A +LL  M+  G  P Y T + +L  LC
Sbjct: 245 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 276



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 160/268 (59%), Gaps = 13/268 (4%)

Query: 144 SLHERVLEMFHKIHPITREKPSLKA---ISTCL--NLLIESNQVDLAQNFLKYSNQHLR- 197
           +L +R++E  H+  P    +  +KA   IST +   L  + N ++ AQN   ++  H + 
Sbjct: 31  ALVDRMVEEGHQ--PNAMGQSHIKADVVISTAIVDRLCKDGNHIN-AQNL--FTEMHEKG 85

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN   +N +I   C  G    A ++L+ M + Q++ P+++T+S LI+   K  +  EA
Sbjct: 86  IFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN-PDIVTFSALINAFVKERKVSEA 144

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E+++EM+ +  I P  +TYN +IDGFC+  +VD AK++++ M + GC+P+V  ++TL+N
Sbjct: 145 EEIYKEML-RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN 203

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CK  ++    E+F EM    +  +T+ YTTLI+ FC+ G +D A +LL EM   G   
Sbjct: 204 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 263

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKL 405
           D +TF+ +L GLC + ++ +A  +LE L
Sbjct: 264 DYITFHCMLAGLCSKKELRKAFAILEDL 291



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 155/282 (54%), Gaps = 10/282 (3%)

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           ++ + RE   L+A++    ++ E +Q     N +  S+    +K +  I   ++   CK 
Sbjct: 17  MNSLCREGRVLEALALVDRMVEEGHQ----PNAMGQSH----IKADVVISTAIVDRLCKD 68

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G   +A  +  EM +  + +PN++TY+ +ID  C +GR+ +A +L   M+ K QI PD +
Sbjct: 69  GNHINAQNLFTEMHEKGI-FPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK-QINPDIV 126

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           T++ LI+ F +  KV  A++I + M      P    Y ++++GFCK+ ++ +AK + D M
Sbjct: 127 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 186

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
            +    PD + ++TLIN +C+A RVD  +E+  EM  RG  A+ VT+  ++ G C+ G +
Sbjct: 187 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 246

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + A  +L ++   G+  +  ++  +L   C K EL KA  +L
Sbjct: 247 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 288



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 142/284 (50%), Gaps = 9/284 (3%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMV---------SKDQILPDALTYNVLIDGFCR 286
           PN++T++TL++ LC+ GR  EA+ L + MV          +  I  D +    ++D  C+
Sbjct: 8   PNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCK 67

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G    A+ +   M   G  PNV  Y  +++ FC  G+  +A ++   M    + PD + 
Sbjct: 68  DGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVT 127

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           ++ LIN F +  +V EA E+ KEM         +T+N ++ G C++ ++++A  ML+ + 
Sbjct: 128 FSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMA 187

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G   +  ++  ++N  C+   ++  +E+   M  RG + +  T   L+   C+ G  +
Sbjct: 188 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 247

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            A   L  ++  G  P+  ++  ++  +C  ++L  AF +L++L
Sbjct: 248 AAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 291



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 123/250 (49%), Gaps = 10/250 (4%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN----------VFNYTTLMNGFCK 321
           P+ +T+N L++  CR G+V  A  +++ M   G  PN          V   T +++  CK
Sbjct: 8   PNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCK 67

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +G    A+ +F EM    + P+ + Y  +I+ FC +GR  +A +LL+ M E+    DIVT
Sbjct: 68  DGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVT 127

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           F+ ++    +E K+ EA  + +++    I+    +Y  +++  C++  ++ A  +L  M 
Sbjct: 128 FSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMA 187

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            +G  P   T + L+   CKA   ++       +   G    + ++  L+   C+   L 
Sbjct: 188 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 247

Query: 502 FAFELLDELV 511
            A +LL+E++
Sbjct: 248 AAQDLLNEMI 257



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 10/221 (4%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY----------TT 349
           M   GC PNV  + TLMN  C+EG++ EA  + D M     +P+ +G           T 
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +++  C+ G    A  L  EM E+G   +++T+N ++   C  G+  +A  +L  +    
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I  +  ++  ++N   ++ ++ +A E+ + ML     P   T N ++   CK    +DA 
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             L  +   G  P+  +++ L+   C+ +++    E+  E+
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 221



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 157 HPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHC 213
           H I ++  P +   S  +N  ++  +V  A+   K   + LR    P T  +N +I   C
Sbjct: 115 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYK---EMLRWSIFPTTITYNSMIDGFC 171

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K+  ++ A  +L  M     S P+++T+STLI+G CK  R    +E+F EM  +  I+ +
Sbjct: 172 KQDRVDDAKRMLDSMASKGCS-PDVVTFSTLINGYCKAKRVDNGMEIFCEM-HRRGIVAN 229

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TY  LI GFC+ G +D A+ ++  M + G  P+   +  ++ G C + +L++A  + +
Sbjct: 230 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 289

Query: 334 EMKNFLLKPDTIGY 347
           +++   + P  I +
Sbjct: 290 DLQKSEVCPRLIFF 303



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 10/183 (5%)

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERG----------CKADIVTFNIILGGLC 390
           +P+ + + TL+N  CR GRV EAL L+  M E G           KAD+V    I+  LC
Sbjct: 7   RPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLC 66

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           ++G    A  +  ++   GI+ N  +Y  +++  C  G    A +LLR M+ +   P   
Sbjct: 67  KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIV 126

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T + L+    K     +A      ++     P + ++  +++  C+  ++  A  +LD +
Sbjct: 127 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 186

Query: 511 VIK 513
             K
Sbjct: 187 ASK 189



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 10/152 (6%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN-------KASYRI--- 419
           M E GC+ ++VTFN ++  LCREG++ EAL +++++  +G   N       KA   I   
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G    A  L   M  +G  P+  T N ++   C +G   DA   L  ++E  
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELV 511
             P+  +++ L+    + RK+  A E+  E++
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEML 152


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 165/318 (51%), Gaps = 1/318 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L LKPN   F  LI   CKRG+++ AFE+L+EM K     PN+ T++ LIDGLCK G   
Sbjct: 295 LGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWK-PNVYTHTALIDGLCKKGWTE 353

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  LF ++V  D   P+  TY  +I G+C+  K++RA+ ++  MK  G  PN   YT L
Sbjct: 354 KAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCL 413

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G  K G  ++A E+ D M       +   Y   I+  C+ GR  EA +LLK+    G 
Sbjct: 414 IDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGL 473

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           +AD VT+ I++  LCR     EAL    K++  G+  +  +Y  ++    ++  +E++ +
Sbjct: 474 QADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEK 533

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L    +  G +P   T   ++   C+      A      + + G  P+S ++  L+  +C
Sbjct: 534 LFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLC 593

Query: 496 RGRKLLFAFELLDELVIK 513
           +  KL  A +L + +V K
Sbjct: 594 KESKLDEACQLYEAMVDK 611



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 153/332 (46%), Gaps = 44/332 (13%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL--IDGLCKN-GRFREAIEL 260
           + + +++   + G  + A  ++ EM+   +    ++T  TL  + G+    G    A  +
Sbjct: 163 VMDCMVRVFAEIGKFQEAVNMVIEMENHGL----VLTVRTLNCVTGVAGEMGLVGYAENV 218

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+EM  +  + PD+++Y ++   +CR G++    + ++ M   G   +    T +++ FC
Sbjct: 219 FDEMRVRG-VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFC 277

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++G        FD+     LKP+ I +T+LIN  C+ G + +A E+L+EM ++G K ++ 
Sbjct: 278 EKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVY 337

Query: 381 TFNIILGGLCREGKIEEALG------------------------------------MLEK 404
           T   ++ GLC++G  E+A                                      +L +
Sbjct: 338 THTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSR 397

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +   G+  N  +Y  +++   + G  EKA EL+ LM   GF  +  T N  +  LCK G 
Sbjct: 398 MKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGR 457

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             +A   L     +G + ++ ++ +L+  +CR
Sbjct: 458 FLEACKLLKKGFRLGLQADTVTYTILISELCR 489



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 5/210 (2%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L L+ +T  + ILI   C+R     A     +M K+ +  P++ TY+TLI    +  R  
Sbjct: 471 LGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQ-PDMHTYNTLIAAFSRQRRME 529

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+ +LF E V    ++P   TY  +I G+CR   V  A K    M ++GC P+   Y  L
Sbjct: 530 ESEKLFAEAVGLG-LVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGAL 588

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CKE KL EA ++++ M +  L P  +   TL   +C+      A+ +L+ + +   
Sbjct: 589 ISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDK--- 645

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKL 405
           K  I T N ++  LC E K+  A+    KL
Sbjct: 646 KLWIRTVNTLIRKLCSERKVGMAVLFFHKL 675



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 78/164 (47%)

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           ++  F   G+  EA+ ++ EM+  G    + T N + G     G +  A  + +++   G
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  +  SY+++    C+ G +      L+ M+ RGF+   AT   ++   C+ G A    
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                 VE+G KP   ++  L+  +C+   +  AFE+L+E+V K
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKK 330


>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Brachypodium distachyon]
          Length = 560

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 194/394 (49%), Gaps = 9/394 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ +++Q G   N    + +    A     +A  A+L +     C      +  LM
Sbjct: 140 ALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNKLM 199

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F  C   +  + +F          P + + +  +  + +   V  A   ++   +   
Sbjct: 200 NSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAE-FG 258

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+T   NIL+   C+   +    EVL+ +++  +  PN++TY+++I G CK+GR  +A
Sbjct: 259 CSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDA 318

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + ++ +M+      P+A+TYNVLI+G+ + G +  A  + + M    C P+V  ++TL++
Sbjct: 319 MAVYNDMIGCGTT-PNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLID 377

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C+ G+L +A   + EM  + ++P+   ++ +I  FC+  R  EAL  LKE+  R    
Sbjct: 378 GYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMR---T 434

Query: 378 DIVT----FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           DI       N ++  LC+ GK++EA  +L ++   G   +K +Y I++   C KG + +A
Sbjct: 435 DIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEA 494

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
           I     M+  G  P   T N  +  L KAGM  +
Sbjct: 495 ITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSE 528



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 191/374 (51%), Gaps = 12/374 (3%)

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           S H   L++F ++   +   P+ + +S        +  +D A   L  + Q        C
Sbjct: 135 SRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAALLSKAPQF-----GCC 189

Query: 204 I----FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           +    +N L+      G ++ A  + +   +     P++ +++  I G+C+ G  ++A+E
Sbjct: 190 VEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALE 249

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNG 318
           L E M ++    PD +T N+L+ G CR  +V R ++++  ++ +G C PNV  YT++++G
Sbjct: 250 LVERM-AEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISG 308

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           +CK G++++A  V+++M      P+ + Y  LIN + +AG +  A+ + ++M  R C  D
Sbjct: 309 YCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPD 368

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +VTF+ ++ G CR G++++A+    ++    I  N  ++ I++   C++    +A+  L+
Sbjct: 369 VVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLK 428

Query: 439 LMLCR-GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            +  R    P     N ++  LCK G  ++A + L  +   G +P+  ++ +L+   C  
Sbjct: 429 ELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMK 488

Query: 498 RKLLFAFELLDELV 511
            ++  A    +++V
Sbjct: 489 GRISEAITFFNKMV 502



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 188/409 (45%), Gaps = 5/409 (1%)

Query: 79  LEIFNTV-SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN-L 136
           L++F+ + S Q     +  +Y  ++  L +  +      +  QMT ++  F    FL+ L
Sbjct: 104 LQLFSALHSSQLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFL 163

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
               +N    +    +  K  P         A +  +N  I   +V  A    +   Q  
Sbjct: 164 AGSCANAGFLDAAAALLSKA-PQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGG 222

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
              P+   FN+ IK  C+ G ++ A E+++ M +   S P+ +T + L+ GLC+      
Sbjct: 223 AYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCS-PDTVTNNILVGGLCRVKEVSR 281

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
             E+   +      +P+ +TY  +I G+C+ G+++ A  +   M   G  PN   Y  L+
Sbjct: 282 GREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLI 341

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           NG+ K G +  A  V+ +M      PD + ++TLI+ +CR G++D+A+    EM +   +
Sbjct: 342 NGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQ 401

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY-RIVLNFSCQKGELEKAIE 435
            +  TF+II+   C++ +  EAL  L++L        +A     V++  C+ G++++A  
Sbjct: 402 PNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANL 461

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +L  M  +G  P   T   L++  C  G   +A      +V+ G  P+S
Sbjct: 462 ILMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDS 510



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 153/330 (46%), Gaps = 3/330 (0%)

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           Q F    +  L + P+   +  +I   C+      A ++  +M      +PN   + + +
Sbjct: 105 QLFSALHSSQLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPN-ARFLSFL 163

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME-FMKNNG 304
            G C N  F +A         +     +A  YN L++ F   G+V  A  + E +++   
Sbjct: 164 AGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGA 223

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
            +P+V+++   + G C+ G +Q+A E+ + M  F   PDT+    L+   CR   V    
Sbjct: 224 YSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGR 283

Query: 365 ELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           E+L+ ++  G C  ++VT+  ++ G C+ G++E+A+ +   +   G   N  +Y +++N 
Sbjct: 284 EVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLING 343

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             + G +  A+ + + M+ R   P   T + L+   C+ G  +DA      + +   +P 
Sbjct: 344 YGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPN 403

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIK 513
           + ++++++   C+  +   A   L EL ++
Sbjct: 404 AHTFSIIILSFCKQNRSAEALRFLKELNMR 433



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 1/172 (0%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R  P+   F+ LI  +C+ G L+ A     EM + Q+  PN  T+S +I   CK  R  E
Sbjct: 364 RCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQ-PNAHTFSIIILSFCKQNRSAE 422

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+   +E+  +  I P A   N +ID  C+GGKVD A  I+  M+  GC P+ + YT L+
Sbjct: 423 ALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILI 482

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
            G C +G++ EA   F++M +    PD+I   + I C  +AG   E   ++K
Sbjct: 483 IGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMK 534



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 41/321 (12%)

Query: 197 RLKPNTCIFNILIKHH-CKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRF 254
           RL P+       ++H  C   TL+    +   +  SQ++ P +  +Y  +I  LC++ R 
Sbjct: 82  RLAPSPVAAAAALRHAPCASSTLQ----LFSALHSSQLAIPPSAHSYRYVISMLCQSSRH 137

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A++LF++M  +    P+A   + L       G +D A  ++      GC    + Y  
Sbjct: 138 TDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNK 197

Query: 315 LMNGFCKEGKLQEAKEVFDE-MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           LMN F   G++Q+A  +F+  ++     PD   +   I   C+ G V +ALEL++ M E 
Sbjct: 198 LMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEF 257

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  D VT NI++GGLCR  ++     +L +L  DG+                       
Sbjct: 258 GCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGV----------------------- 294

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
                       +P+  T   ++   CK+G  EDA      ++  G  P + ++ +L+  
Sbjct: 295 -----------CMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLING 343

Query: 494 ICRGRKLLFAFELLDELVIKE 514
             +   +  A  +  +++++ 
Sbjct: 344 YGKAGNMGSAVAVYQQMILRR 364


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 209/421 (49%), Gaps = 6/421 (1%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           +  +L   A  +++E V    ++M           F  L+  F  CS     L +  K+ 
Sbjct: 74  FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
            +  E PS+    + L+     N++  A + +    +    +PN  ++N LI   CK G 
Sbjct: 134 KLGYE-PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS-GYEPNVVVYNTLIDGLCKNGE 191

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L  A E+L EM+K  +   +++TY+TL+ GLC +GR+ +A  +  +M+ K  I PD +T+
Sbjct: 192 LNIALELLNEMEKKGLG-ADVVTYNTLLTGLCYSGRWSDAARMLRDMM-KRSINPDVVTF 249

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
             LID F + G +D A+++ + M  +  +PN   Y +++NG C  G+L +AK+ FD M +
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               P+ + Y TLI+ FC+   VDE ++L + M   G  ADI T+N ++ G C+ GK+  
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +   +    +  +  ++ I+L+  C  GE+E A+     M            N ++ 
Sbjct: 370 ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIH 429

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
            LCKA   E A      L   G KP++ ++ +++  +C+      A EL+  +  KE G 
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM--KEEGI 487

Query: 518 I 518
           I
Sbjct: 488 I 488



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 141/281 (50%), Gaps = 2/281 (0%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            E AF +  EM  SQ   P+++ ++ L+     N R  E +  F + +    I  D  ++
Sbjct: 52  FEDAFALFFEMVHSQ-PLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSF 109

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
            +LI  FCR  ++  A  ++  M   G  P++  + +L++GFC   ++ +A  +   M  
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              +P+ + Y TLI+  C+ G ++ ALELL EM+++G  AD+VT+N +L GLC  G+  +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  ML  +    I  +  ++  +++   ++G L++A EL + M+     P+  T N ++ 
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            LC  G   DA      +   G  P   ++  L+   C+ R
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 126/267 (47%), Gaps = 1/267 (0%)

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G   + RF +A  LF EMV   Q LP  + +  L+       + +      + M+  G +
Sbjct: 45  GFLHSIRFEDAFALFFEMV-HSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++++T L++ FC+  +L  A  V  +M     +P  + + +L++ FC   R+ +A  L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           +  M + G + ++V +N ++ GLC+ G++  AL +L ++   G+  +  +Y  +L   C 
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G    A  +LR M+ R   P   T   L+    K G  ++A      +++    P + +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  ++  +C   +L  A +  D +  K
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASK 310



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 73/164 (44%)

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
           F  + R ++A  L  EM        IV F  +L       + E  +   +K+   GI  +
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             S+ I+++  C+   L  A+ +L  M+  G+ P   T   LL   C      DA   + 
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
            +V+ G++P    +  L++ +C+  +L  A ELL+E+  K  G 
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 158/274 (57%), Gaps = 3/274 (1%)

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +  ++ LAQ+    S     L+P+   FN L+  + K G L+  F +   M+ S +  P+
Sbjct: 148 KGGEIXLAQSVFD-SITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQ-PD 205

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + TYS LI+GLCK  +  +A  LF+EM+  + ++P+ +T+  LIDG C+ G+VD A +I 
Sbjct: 206 VYTYSVLINGLCKESKMDDANALFDEMLD-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             M +    P++  Y TL+ G CK+G L++A+++ DEM    LKPD I YTTLI+  C+ 
Sbjct: 265 RQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G ++ A E  K M +   + D V +  ++  LC+EG+  +A  ML ++   G+     +Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            +++N  C+KG++    +LL+ M   G+LP+  T
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 161/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G    A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHNFCKGGEIXLAQSVFDS-ITKWGLRPSVVSFNTLMNGYIKIGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ Y+ L+NG CKE K+ +A  +FDEM +  L P+ + +TTLI+
Sbjct: 190 GFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ ++M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVIEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ FCK G++  A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T+++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+
Sbjct: 194 KSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ R ML +  LP   T N L+  LCK G  + A   +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 189/377 (50%), Gaps = 8/377 (2%)

Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           TY  C  +  +F  L++ +    +    +  F  +  I   KPS+   +  +  ++++ +
Sbjct: 97  TYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSM-LIRGFKPSVYTCNMIMASMVKNCR 155

Query: 182 VDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
             L  +F K   Q L  R+ PN   FNILI   C +G L+ A  +L  M+++    P ++
Sbjct: 156 AHLVWSFFK---QMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGY-VPTIV 211

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           +Y+TL+   CK GRF+ A+ L   M  K  I  D  TYN+ ID  CR  +  +   +++ 
Sbjct: 212 SYNTLLSWCCKKGRFKFALVLIHHMECKG-IQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+N    PN  +Y TL+NGF KEGK+  A  VF+EM    L P+ I Y  LIN +C  G 
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            +EAL +L  M+    + + VT   +L GL +  K + A  +LE+   +   LN  S+ +
Sbjct: 331 FEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTV 390

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+ G L++A +LL  M   G  P   T + L+   CK G    A   +  +   G
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450

Query: 480 FKPESDSWALLVELICR 496
           F P +  ++ L+   C+
Sbjct: 451 FVPNNVIFSTLIYNSCK 467



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 220/457 (48%), Gaps = 17/457 (3%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           S    IS++  + + + A+ I  T+ E+ G+     +Y T+L    +  +F+    ++  
Sbjct: 177 SFNILISVLCVQGKLKKAVNIL-TMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235

Query: 121 M-----TYETCKFHEGIFLNLMKHFSNCSLHERVLE-MFHKIHPITREKPSLKAISTCLN 174
           M       + C ++  +F++ +   S  +    VL+ M +K+  IT   P+  + +T +N
Sbjct: 236 MECKGIQADVCTYN--MFIDSLCRNSRSAQGYLVLKKMRNKM--IT---PNEVSYNTLIN 288

Query: 175 LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS 234
             ++  ++ +A        + L L PN   +NILI  +C  G  E A  VL  M+ + + 
Sbjct: 289 GFVKEGKIGVATRVFNEMIE-LNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVR 347

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            PN +T  TL++GL K+ +F  A  + E        L + +++ V+IDG CR G +D A 
Sbjct: 348 -PNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSL-NCISHTVMIDGLCRNGLLDEAF 405

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +++  M  +G +P++  ++ L+NGFCK G + +AKEV  ++      P+ + ++TLI   
Sbjct: 406 QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G V EA++    M   G  AD  T N ++  LC  GK+ EA   L  +   G+  N 
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            ++  ++N     G+   A  +   M+  G  P   T   LL  LCK     +A   L  
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           L  +    ++ S+  L+  I +   LL A  L +E++
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMI 622



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 160/348 (45%), Gaps = 38/348 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  L+K  CK      A ++LK++    ++  + I+Y+TLI  + K+G   EA+ 
Sbjct: 558 PSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAV-DTISYNTLIVEISKSGNLLEAVR 616

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNG 318
           LFEEM+ ++ ILPD+ TY  ++ G  R G++  A   +   M+      N   YT  ++G
Sbjct: 617 LFEEMI-QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
             K G+ + A  +F EM+   L  D I   ++ + + R G+V  A  L+ + + +    +
Sbjct: 676 LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 379 IVTFNIILGG-----------------------------------LCREGKIEEALGMLE 403
           + TFNI+L G                                   LC  G +E  + ML+
Sbjct: 736 LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
               +   ++  ++ +++   C+  +L+K I+L   M          T   +   L +  
Sbjct: 796 MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           ++++  + +  +++ GF P S  +  +++ +CR   +  AF+L D++V
Sbjct: 856 VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMV 903



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 148/349 (42%), Gaps = 18/349 (5%)

Query: 184 LAQNFLKYSNQHLRLKPN--TCIFNILIKHHCKRGTLESAFEVLKEMKKSQM-------- 233
           LA  FLK+  +   L+PN  T I  I      K      A  +LK + +           
Sbjct: 34  LALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGV 93

Query: 234 ---SYP----NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
              +YP    N   +  LI    + G    A+  F  M+ +    P   T N+++    +
Sbjct: 94  LMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG-FKPSVYTCNMIMASMVK 152

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
             +        + M  +   PNV ++  L++  C +GKL++A  +   M+     P  + 
Sbjct: 153 NCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVS 212

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y TL++  C+ GR   AL L+  M+ +G +AD+ T+N+ +  LCR  +  +   +L+K+ 
Sbjct: 213 YNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMR 272

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
              I  N+ SY  ++N   ++G++  A  +   M+     P+  T N L+   C  G  E
Sbjct: 273 NKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFE 332

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           +A   L  +     +P   +   L+  + +  K   A  +L+   I  +
Sbjct: 333 EALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRT 381



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 131/316 (41%), Gaps = 37/316 (11%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            PN   FNIL+  + +   + S F++   M++S   +PN +TY +LI GLC +G     I+
Sbjct: 734  PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGF-FPNRLTYHSLILGLCNHGMLELGIK 792

Query: 260  LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI----------------------- 296
            + +  +++   + D LT+N+LI   C    +D+   +                       
Sbjct: 793  MLKMFIAESSTIDD-LTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVL 851

Query: 297  ------------MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
                        M  M   G  P    Y T+M   C+ G +Q A ++ D+M    +  D 
Sbjct: 852  VRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDD 911

Query: 345  IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
                 ++      G+++EA+ +L+ M          TF  ++   C++   +EA  +   
Sbjct: 912  AAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKIL 971

Query: 405  LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
            + +  + L+  +Y ++++  C  G++  A++    +  +G LP+  T   L+  +     
Sbjct: 972  MEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHY 1031

Query: 465  AEDAAIALFGLVEMGF 480
                 I L  L + G 
Sbjct: 1032 VSRGEIVLKDLNDRGL 1047



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 173/417 (41%), Gaps = 47/417 (11%)

Query: 72   EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
            E    CA      + +++    N+  Y   +D L +  + +A   + ++M        +G
Sbjct: 643  EGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEME------EKG 696

Query: 132  IFLNLMKHFSNCSLHERVLEMFHKIHPI--TREKPSLKAISTCLNLLIE--SNQVDLAQN 187
            + L+L+   S    + R+ ++F     I  TR K  +  ++T  N+L+   S   D+   
Sbjct: 697  LSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTT-FNILLHGYSRGQDIMSC 755

Query: 188  FLKYS-NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            F  Y+  +     PN   ++ LI   C  G LE   ++LK M  ++ S  + +T++ LI 
Sbjct: 756  FKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK-MFIAESSTIDDLTFNMLIR 814

Query: 247  GLCKNGRFREAIELFEEM----VSKDQ------------------------------ILP 272
              C+     + I+L   M    VS D+                               +P
Sbjct: 815  KCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIP 874

Query: 273  DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
             +  Y  ++   CR G +  A K+ + M   G + +      ++ G    GK++EA  + 
Sbjct: 875  TSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWIL 934

Query: 333  DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
              M      P T  +TTL++ FC+     EA  L   M+    K DIV +N+++   C  
Sbjct: 935  QRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCAN 994

Query: 393  GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            G +  AL   E++   G+  N  +YR++++    K  + +   +L+ +  RG +  Y
Sbjct: 995  GDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGY 1051


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 243/512 (47%), Gaps = 41/512 (8%)

Query: 14  FSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEK 73
           FSS  T S ++P  +P ++  AN PK+          + A      + HG  + +  C+K
Sbjct: 24  FSSLFTHSPTIPSSNP-QISSANHPKS----------LHALSERISLQHGLPMFIHNCKK 72

Query: 74  ---EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK--- 127
                  AL+ F+ +           ++  +L  LA+ K +  V ++ ++M         
Sbjct: 73  GNITSTQALQFFDLMMRSI------ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLA 185
           F   I +N +     C+++ RV E    +  I R    P +   ++ +  L   +++  A
Sbjct: 127 FTLNILINCL-----CNVN-RVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-----PNLIT 240
              L    Q L   PN   +  LIK  C+ G +  A ++ +EM      Y     PN+ +
Sbjct: 181 TR-LFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFS 239

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ +ID LCK G+++EA  LF EMV +  + PD +T++ LID  C+ G V  AKK +E M
Sbjct: 240 YNIIIDELCKIGKWKEAKRLFNEMVDQG-VRPDVVTFSALIDTLCKEGMVIEAKKFLETM 298

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G  P++F +T+L+ GFC  G L  AKE+F  M +   +PD I YT LI  +C+   V
Sbjct: 299 MLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNV 358

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           +EA++L  EM   G   D+ TF ++L GL   GK+ +A  +   +    +  N     + 
Sbjct: 359 EEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVF 418

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           L+  C+ G L +A+EL   +          + N L+  LCKA   E A      L + G 
Sbjct: 419 LDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGL 478

Query: 481 KPESDSWALLVELICRGRKLLFA---FELLDE 509
           +P+  ++ +++   C+  ++  A   F++++E
Sbjct: 479 QPDVVTYCIMINGFCKNGQVDNANILFQMMEE 510



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 156/302 (51%), Gaps = 2/302 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+   F+ LI   CK G +  A + L+ M    +  P+L T+++LI+G C  G    A
Sbjct: 268 VRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGI-VPDLFTFTSLIEGFCLVGDLDSA 326

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF  M SK    PD ++Y VLI G+C+   V+ A K+   M   G  P++  +  L+ 
Sbjct: 327 KELFLSMPSKGY-EPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLK 385

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G    GK+ +AK++F  +K   +  +    +  ++  C+ G + EA+EL  E+K    K 
Sbjct: 386 GLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKL 445

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI +FN ++ GLC+  K+E A  + EKL  +G+  +  +Y I++N  C+ G+++ A  L 
Sbjct: 446 DIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILF 505

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           ++M   G  P+  T + LL    K    E+    L  +++      +  + ++ +++ + 
Sbjct: 506 QMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKD 565

Query: 498 RK 499
            K
Sbjct: 566 EK 567



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 154/309 (49%), Gaps = 15/309 (4%)

Query: 211 HHCKRGTLES--AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           H+CK+G + S  A +    M +S      +I+++ L+  L K   + +   L+++M    
Sbjct: 68  HNCKKGNITSTQALQFFDLMMRS------IISFNLLLGALAKIKHYSQVFSLYKKM-HLA 120

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + P+  T N+LI+  C   +V      M  +   G  P+V  YT+L+ G C E ++ EA
Sbjct: 121 GLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER------GCKADIVTF 382
             +F  M+     P+ + Y TLI   CR G ++ AL+L +EM          CK +I ++
Sbjct: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           NII+  LC+ GK +EA  +  ++   G+  +  ++  +++  C++G + +A + L  M+ 
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           RG +P   T   L+   C  G  + A      +   G++P+  S+ +L+   C+   +  
Sbjct: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360

Query: 503 AFELLDELV 511
           A +L +E++
Sbjct: 361 AMKLYNEML 369


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 162/301 (53%), Gaps = 1/301 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  KPN   F  LI   CK+G+++ AFE+L+EM ++    PN+ T++ LIDGLCK G   
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK-PNVYTHTALIDGLCKRGWTE 362

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  LF ++V  D   P+  TY  +I G+C+  K++RA+ +   MK  G  PNV  YTTL
Sbjct: 363 KAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 422

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK G    A E+ + M +   +P+   Y  +I+  C+  R  EA ELL +    G 
Sbjct: 423 INGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGL 482

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           +AD VT+ I++   C++  I++AL    ++   G   +     I++   C++ +++++  
Sbjct: 483 EADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 542

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L +L++  G +P   T   ++   CK G  + A      +   G  P+S ++  L+  +C
Sbjct: 543 LFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLC 602

Query: 496 R 496
           +
Sbjct: 603 K 603



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 159/313 (50%), Gaps = 3/313 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN      LI   CKRG  E AF +  ++ +S +  PN+ TY+++I G CK  +   A 
Sbjct: 342 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAE 401

Query: 259 ELFEEMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            LF  M  K+Q + P+  TY  LI+G C+ G  DRA ++M  M + G  PN++ Y  +++
Sbjct: 402 MLFSRM--KEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVID 459

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK+ +  EA E+ ++  +  L+ D + YT LI   C+   + +AL     M + G +A
Sbjct: 460 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEA 519

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+   NI++   CR+ K++E+  + + +   G+   K +Y  +++  C++G+ + A++  
Sbjct: 520 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYF 579

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G +P   T   L+  LCK  M ++A      +++ G  P   +   L    C+ 
Sbjct: 580 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 639

Query: 498 RKLLFAFELLDEL 510
                A  +L+ L
Sbjct: 640 NDSASAMIVLEPL 652



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 174/370 (47%), Gaps = 41/370 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAF 222
           PS   ++  L + IES  +D A+N   +    +R + P++  F +++    + G ++ A 
Sbjct: 203 PSSITMNCVLEIAIESGLIDYAENV--FDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEAD 260

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
             L  M +     P+  T + ++  LC+NG    AI  F +M+      P+ + +  LID
Sbjct: 261 RWLSGMIQRGF-IPDNATCTLILSALCENGLVNRAIWYFRKMIDLG-FKPNLINFTSLID 318

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVF-------------------------------- 310
           G C+ G + +A +++E M  NG  PNV+                                
Sbjct: 319 GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYK 378

Query: 311 ----NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
                YT+++ G+CKE KL  A+ +F  MK   L P+   YTTLIN  C+AG  D A EL
Sbjct: 379 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYEL 438

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           +  M + G + +I T+N ++  LC++ +  EA  +L K +  G+  +  +Y I++   C+
Sbjct: 439 MNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 498

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           + ++++A+     M   GF      +N L+   C+    +++      +V +G  P  ++
Sbjct: 499 QSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKET 558

Query: 487 WALLVELICR 496
           +  ++   C+
Sbjct: 559 YTSMISGYCK 568



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 130/258 (50%), Gaps = 2/258 (0%)

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  EA+ +  +M ++  + P ++T N +++     G +D A+ + + M   G  P+  +
Sbjct: 184 GRLNEAVGMVMDMQNQG-LSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSS 242

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           +  ++ G  ++GK+QEA      M      PD    T +++  C  G V+ A+   ++M 
Sbjct: 243 FKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMI 302

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           + G K +++ F  ++ GLC++G I++A  MLE++  +G   N  ++  +++  C++G  E
Sbjct: 303 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 362

Query: 432 KAIEL-LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           KA  L L+L+    + P+  T   ++   CK      A +    + E G  P  +++  L
Sbjct: 363 KAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 422

Query: 491 VELICRGRKLLFAFELLD 508
           +   C+      A+EL++
Sbjct: 423 INGHCKAGNFDRAYELMN 440



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 5/208 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+ +   + ILI+  CK+  ++ A      M K+     ++   + LI   C+  + +E+
Sbjct: 482 LEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFE-ADMRLNNILIAAFCRQKKMKES 540

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+ +VS   ++P   TY  +I G+C+ G  D A K    MK +GC P+ F Y +L++
Sbjct: 541 ERLFQLVVSLG-LVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLIS 599

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+  + EA ++++ M +  L P  +   TL   +C+      A+ +L+ + +   K 
Sbjct: 600 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDK---KL 656

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKL 405
            I T   ++  LC E K+  A    +KL
Sbjct: 657 WIRTVRTLVRKLCSEKKVGVAALFFQKL 684



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 15/235 (6%)

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y V  D     G + +A ++M  M  N               F + G+L EA  +  +M+
Sbjct: 153 YLVTADSLIANGNLQKAHEVMRCMLRN---------------FSEIGRLNEAVGMVMDMQ 197

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           N  L P +I    ++     +G +D A  +  EM  RG   D  +F +++ G  R+GKI+
Sbjct: 198 NQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQ 257

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA   L  +   G   + A+  ++L+  C+ G + +AI   R M+  GF P+      L+
Sbjct: 258 EADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 317

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LCK G  + A   L  +V  G+KP   +   L++ +C+      AF L  +LV
Sbjct: 318 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 372


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 219/449 (48%), Gaps = 27/449 (6%)

Query: 82  FNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           +N + E   KGF  + +TY+ ++  L    K E    + ++M          ++  L+  
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266

Query: 140 FSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           F      E+    F ++    R+   P++   +  ++  ++S +V  A    +       
Sbjct: 267 FCKAGFIEQARNWFDEME---RDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSK-G 322

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP----------------NLITY 241
             PN   +  LI   CK G +E A ++ K MKK  +  P                N+ TY
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
             L+DGLCK  + +EA +L + M S +   P+ + Y+ LIDG C+ GK+D A+++   M 
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSM-SVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTML 441

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             G +PNV+ Y++L++   K+ +L  A +V  +M      P+ + YT +I+  C+ G+ D
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 501

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           EA +L+  M+E+GC  ++VT+  ++ G  + G++E+ L +L+++   G   N  +YR+++
Sbjct: 502 EAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI 561

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N  C  G L++A +LL  M    +  H A   +++    +  +A  +    F + E    
Sbjct: 562 NHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIA--SLYLSFEISENDSV 619

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
           P +  + +L++   +  +L  A EL +EL
Sbjct: 620 PVAPVYRVLIDNFIKAGRLEIALELNEEL 648



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 188/375 (50%), Gaps = 19/375 (5%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           KFE    V+R+M  +        +  ++ +  N S  E+  ++F ++       P +   
Sbjct: 202 KFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKR-NGIAPDVYVY 260

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +T ++   ++  ++ A+N+     +     PN   +  LI  + K   +  A EV  EM 
Sbjct: 261 TTLIDSFCKAGFIEQARNWFDEMERD-GCAPNVVTYTALIHAYLKSRKVSKANEVY-EMM 318

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA--------------- 274
            S+   PN++TY+ LIDGLCK G+  +A ++++ M  ++  +PD                
Sbjct: 319 LSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPN 378

Query: 275 -LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
             TY  L+DG C+  +V  A+ +++ M   GC PN   Y  L++G CK GKL EA+EVF 
Sbjct: 379 VFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFT 438

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M      P+   Y++LI+   +  R+D AL++L +M E  C  ++V +  ++ GLC+ G
Sbjct: 439 TMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVG 498

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           K +EA  ++  +   G   N  +Y  +++   + G +EK +ELL+ M  +G  P++ T  
Sbjct: 499 KTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYR 558

Query: 454 ELLVRLCKAGMAEDA 468
            L+   C  G+ ++A
Sbjct: 559 VLINHCCSTGLLDEA 573



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 175/331 (52%), Gaps = 19/331 (5%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T  ++ +I + C    +E AF++ +EMK++ ++ P++  Y+TLID  CK G   +A  
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIA-PDVYVYTTLIDSFCKAGFIEQARN 278

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            F+EM  +D   P+ +TY  LI  + +  KV +A ++ E M + GC PN+  YT L++G 
Sbjct: 279 WFDEM-ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 320 CKEGKLQEAKEVFDEMK-----------NFLL------KPDTIGYTTLINCFCRAGRVDE 362
           CK GK+++A +++  MK           +F +      +P+   Y  L++  C+A +V E
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A +LLK M   GC+ + V ++ ++ G C+ GK++EA  +   +   G   N  +Y  +++
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID 457

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
              +   L+ A+++L  ML     P+     E++  LCK G  ++A   +  + E G  P
Sbjct: 458 RLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517

Query: 483 ESDSWALLVELICRGRKLLFAFELLDELVIK 513
              ++  +++   +  ++    ELL ++  K
Sbjct: 518 NVVTYTAMIDGFGKSGRVEKCLELLQQMSSK 548



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 189/417 (45%), Gaps = 59/417 (14%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG   N  TY  ++D L +  K E    + + M  E  +              +  +H 
Sbjct: 320 SKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEI------------PDVDMHF 367

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           RV++           +P++      ++ L ++ QV  A++ LK S      +PN  +++ 
Sbjct: 368 RVVDG-------ASNEPNVFTYGALVDGLCKAYQVKEARDLLK-SMSVEGCEPNHVVYDA 419

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   CK G L+ A EV   M +     PN+ TYS+LID L K+ R   A+++  +M+ +
Sbjct: 420 LIDGCCKAGKLDEAQEVFTTMLECGYD-PNVYTYSSLIDRLFKDKRLDLALKVLSKML-E 477

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           +   P+ + Y  +IDG C+ GK D A K+M  M+  GCNPNV  YT +++GF K G++++
Sbjct: 478 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEK 537

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
             E+  +M +    P+ + Y  LIN  C  G +DEA +LL+EMK+      +  +  ++ 
Sbjct: 538 CLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIE 597

Query: 388 GLCRE---------------------------------GKIEEALGMLEKLW-YDGIYLN 413
           G  RE                                 G++E AL + E+L  +      
Sbjct: 598 GFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAA 657

Query: 414 KASYRIVL--NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
             +  I L  N S    + +KA EL   M+ RG +P  +    L+  L +    E+A
Sbjct: 658 NQNIHITLIENLSLAH-KADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEA 713



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 139/279 (49%), Gaps = 15/279 (5%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T       LCK+G++REA+ L E    K++ +PD + Y  +I G C     + A   +  
Sbjct: 12  TLGCFAHSLCKSGKWREALSLLE----KEEFVPDTVLYTKMISGLCEASLFEEAMDFLTR 67

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M+ + C PNV  Y  L+ G   + KL   K +   M      P    + +L++ +CR+G 
Sbjct: 68  MRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGD 127

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLC-REGKIEEALGMLEKLWYD----GIYLNK 414
              A +LLK+M + GC+   V +NI++GG+C  E   ++ L + EK + +    G+ LNK
Sbjct: 128 YAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNK 187

Query: 415 ASYRIVLNFS---CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            +   + NFS   C  G+ EKA  ++R M+ +GF+P  +T ++++  LC A   E A   
Sbjct: 188 VN---ISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQL 244

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +   G  P+   +  L++  C+   +  A    DE+
Sbjct: 245 FQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 158/372 (42%), Gaps = 61/372 (16%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+T ++  +I   C+    E A + L  M+ S    PN++TY  L+ G     +      
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASS-CLPNVLTYRILLCGCLNKEKLGRCKR 98

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M++ +   P    +N L+  +CR G    A K+++ M   GC P    Y  L+ G 
Sbjct: 99  ILSMMIT-EGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGI 157

Query: 320 CKE----------------------------------------GKLQEAKEVFDEMKNFL 339
           C                                          GK ++A  V  EM +  
Sbjct: 158 CSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKG 217

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             PDT  Y+ +I   C A +V++A +L +EMK  G   D+  +  ++   C+ G IE+A 
Sbjct: 218 FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
              +++  DG   N  +Y  +++   +  ++ KA E+  +ML +G  P+  T   L+  L
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 460 CKAGMAEDAAIALFGL----------VEMGFK--------PESDSWALLVELICRGRKLL 501
           CKAG  E A+  ++ +          V+M F+        P   ++  LV+ +C+  ++ 
Sbjct: 338 CKAGKIEKAS-QIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVK 396

Query: 502 FAFELLDELVIK 513
            A +LL  + ++
Sbjct: 397 EARDLLKSMSVE 408



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 141/306 (46%), Gaps = 10/306 (3%)

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G    A  +L++    +   P+ + Y+ +I GLC+   F EA++    M +    LP
Sbjct: 21  CKSGKWREALSLLEK----EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRA-SSCLP 75

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           + LTY +L+ G     K+ R K+I+  M   GC P+   + +L++ +C+ G    A ++ 
Sbjct: 76  NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRA---GR--VDEALELLKEMKERGCKADIVTFNIILG 387
            +M     +P  + Y  LI   C +   G+  +D A +   EM E G   + V  +    
Sbjct: 136 KKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSR 195

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
            LC  GK E+A  ++ ++   G   + ++Y  V+ + C   ++EKA +L + M   G  P
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                  L+   CKAG  E A      +   G  P   ++  L+    + RK+  A E+ 
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315

Query: 508 DELVIK 513
           + ++ K
Sbjct: 316 EMMLSK 321



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 43/349 (12%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++D L +  + +    +L+ M+ E C+ +  ++  L+         +   E+F
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
             +     + P++   S+ ++ L +  ++DLA   L    ++    PN  I+  +I   C
Sbjct: 438 TTMLECGYD-PNVYTYSSLIDRLFKDKRLDLALKVLSKMLEN-SCAPNVVIYTEMIDGLC 495

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G  + A++++  M++   + PN++TY+ +IDG  K+GR  + +EL ++M SK    P+
Sbjct: 496 KVGKTDEAYKLMVMMEEKGCN-PNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG-CAPN 553

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKN------------------------------- 302
            +TY VLI+  C  G +D A K++E MK                                
Sbjct: 554 FVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEI 613

Query: 303 --NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG----YTTLINCFCR 356
             N   P    Y  L++ F K G+L+ A E+ +E+ +F   P +      + TLI     
Sbjct: 614 SENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSF--SPFSAANQNIHITLIENLSL 671

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
           A + D+A EL  +M  RG   ++     ++ GL R  + EEAL +L+ +
Sbjct: 672 AHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 43/251 (17%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G   + F      +  CK GK +EA  +  E + F+  PDT+ YT +I+  C A  
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLL-EKEEFV--PDTVLYTKMISGLCEASL 57

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            +EA++ L  M+   C  +++T+ I+L G   + K+     +L  +  +G Y +   +  
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA----------------- 462
           +++  C+ G+   A +LL+ M+  G  P Y   N L+  +C +                 
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 463 -----------------------GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
                                  G  E A   +  ++  GF P++ +++ ++  +C   K
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 500 LLFAFELLDEL 510
           +  AF+L  E+
Sbjct: 238 VEKAFQLFQEM 248



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 3/142 (2%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M   G + D  T       LC+ GK  EAL +LEK   +    +   Y  +++  C+   
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASL 57

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            E+A++ L  M     LP+  T   LL               L  ++  G  P    +  
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 490 LVELICRGRKLLFAFELLDELV 511
           LV   CR     +A++LL ++V
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMV 139


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 169/328 (51%), Gaps = 6/328 (1%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A+++LK   QH    PN   +NI+I  +CK   +E A   L+EM++     P    YS++
Sbjct: 83  AESYLKRMPQHC--APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHP-PTPHAYSSI 139

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           +   CK G   +A+++F EM +K    PD + +NVL+ G  R  K+  A+++   M + G
Sbjct: 140 VQSFCKTGNVSKAMDVFAEMPAKG-CEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 198

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C P+V  Y T++ G CK  KL EA  + + MK   + P  + YTTLI+  C+  R+ +A 
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAY 258

Query: 365 ELLKEMKERGCKADIVTFN--IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           E+ ++M E  C      ++  I++ GLC+  +  EA  M +++   GI     +Y  +L 
Sbjct: 259 EVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 318

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
                 +L+ A+EL   ML +   P+  T   L+  LCK    E+A   L  + + GF P
Sbjct: 319 GLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVP 378

Query: 483 ESDSWALLVELICRGRKLLFAFELLDEL 510
               W +L+  + R  +L  AFEL  E+
Sbjct: 379 SLKIWEVLLSRLARAGRLDDAFELYKEM 406



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 178/372 (47%), Gaps = 41/372 (11%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L+E++ V  A+  ++   ++    P+     +LI+   K G+ +     L  M ++ + +
Sbjct: 4   LVEADLVAQAEAIVE-EMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL-F 61

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN I Y+ LI  LCK G   EA    + M       P+ ++YN++IDG+C+   +++A  
Sbjct: 62  PNAILYNNLISCLCKAGMLAEAESYLKRM--PQHCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
            +  M+  G  P    Y++++  FCK G + +A +VF EM     +PD + +  L++   
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           RA ++ EA EL + M  RGCK D+VT+N ++ GLC+  K++EA+ +LE++  + +     
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 416 SYRIVLNFSCQKGELEKAIELLRLM--------------------LC------------- 442
           +Y  +++  C+   L++A E+   M                    LC             
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 443 ----RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
               RG  P   T N LL  L      +DA    + +++    P   ++ +L+  +C+  
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359

Query: 499 KLLFAFELLDEL 510
           ++  AF+LL  +
Sbjct: 360 QVEEAFKLLSAM 371



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 181/387 (46%), Gaps = 39/387 (10%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  +Y  I+D   + +  E   A LR+M           + ++++ F       + +++F
Sbjct: 97  NVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVF 156

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            ++ P    +P +   +  L+ L  + ++  A+   +  N     KP+   +N +I   C
Sbjct: 157 AEM-PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSR-GCKPDVVTYNTMIAGLC 214

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILP 272
           K   L+ A  +L+ MK+  +S P  +TY+TLID LCK  R ++A E+FE+M         
Sbjct: 215 KWKKLDEAVFLLERMKQEDVS-PTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTE 273

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            A +  +LI+G C+  +   AK++ + M+  G +P V  Y TL+ G     KLQ+A E+ 
Sbjct: 274 PAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELT 333

Query: 333 DEMKNFLLKPDTIGYTTLINCFC-----------------------------------RA 357
             M + +  P+   Y  LI+  C                                   RA
Sbjct: 334 YFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARA 393

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           GR+D+A EL KEM    C+  + + NI+L G+ R G ++EA   L+++   GI  +K +Y
Sbjct: 394 GRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTY 453

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRG 444
             ++   C +G+ ++A +L+  ++  G
Sbjct: 454 DKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 158/335 (47%), Gaps = 44/335 (13%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F +++  +G   +  TY T++  L ++KK +    +L +M  E        +  L+
Sbjct: 187 ARELFRSMN-SRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLI 245

Query: 138 KHFSNCSLHERVLEMFHKIH--PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
            H    +  ++  E+F K+   P    +P+   +                          
Sbjct: 246 DHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVL-------------------------- 279

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
                      ILI   CK      A E+ +EM+   +S P ++TY+TL++GL    + +
Sbjct: 280 -----------ILINGLCKARRPGEAKEMFQEMRGRGIS-PTVVTYNTLLEGLLSTAKLQ 327

Query: 256 EAIELFEEMVSKDQI-LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           +A+EL   M+  DQ+  P+  TY +LI   C+  +V+ A K++  M++ G  P++  +  
Sbjct: 328 DAMELTYFML--DQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEV 385

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++   + G+L +A E++ EM     +        L++   R G VDEA + LK+M + G
Sbjct: 386 LLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTG 445

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
              D  T++ ++ GLC +GK ++A  ++E+L  DG
Sbjct: 446 IVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 1/157 (0%)

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
           A  V +A  +++EMK  G   D+ +  +++ G  + G  +     L+++   G++ N   
Sbjct: 7   ADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAIL 66

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C+ G L +A   L+ M  +   P+  + N ++   CKA   E A   L  + 
Sbjct: 67  YNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAFLREME 125

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           E+G  P   +++ +V+  C+   +  A ++  E+  K
Sbjct: 126 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAK 162


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 237/529 (44%), Gaps = 116/529 (21%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLAR------YKKF---------------E 112
           +P  AL  F  V+ + GF H  A++A +L  LAR      Y K                E
Sbjct: 67  DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMRE 126

Query: 113 AVDAV--LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
           AVDA+  +R++  +     +  +L +M     C  +E    +  +    TR       + 
Sbjct: 127 AVDAIQAIRRVGGD---LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETR------CVR 177

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
             L LL+   Q   + N   Y+              +LIK  CK G +  A  VL+EM  
Sbjct: 178 EALVLLVMMVQDGCSLNLHTYT--------------LLIKGLCKEGRIHGARRVLEEMPL 223

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             +  P++ TY+ +IDG CK+GR ++A+ + + ++ ++   PD  TYN+LI G C G K 
Sbjct: 224 RGV-VPSVWTYNAMIDGYCKSGRMKDALGI-KALMERNGCNPDDWTYNILIYGLC-GEKP 280

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL------------------------- 325
           D A++++      G  P V  +T ++NG+CK  ++                         
Sbjct: 281 DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVL 340

Query: 326 ----------QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
                     +EAKE   EM    L P+ + YT++I+ +C+ G+V  ALE+ + M+  GC
Sbjct: 341 INVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGC 400

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + +  T++ ++ GL ++ K+ +A+ ++ K+  DGI     +Y  ++   C+K E + A  
Sbjct: 401 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 460

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAED---------------------------- 467
           L  +M   G  P     N L   LCK+G AE+                            
Sbjct: 461 LFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAG 520

Query: 468 ----AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
               AA+ +  +V  G K +S ++++L++ +C+ +KL  A  +LD++ +
Sbjct: 521 NTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTL 569



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 216/499 (43%), Gaps = 67/499 (13%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR---QMTYETCK 127
           C ++P  A E+ N  +  +GF     T+  I++    Y K E +D  LR    M    CK
Sbjct: 276 CGEKPDEAEELLND-AIVRGFTPTVITFTNIING---YCKAERIDDALRVKTSMLSSNCK 331

Query: 128 FH---EGIFLN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD 183
                 G+ +N L+K        E V EMF          P++   ++ ++   +  +V 
Sbjct: 332 LDLQAYGVLINVLIKKCRFKEAKETVSEMF-----ANGLAPNVVIYTSIIDGYCKVGKVG 386

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
            A    +   +H   +PN   ++ LI    +   L  A  ++ +M++  ++ P +ITY+T
Sbjct: 387 AALEVFRLM-EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT-PGVITYTT 444

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL----------------------- 280
           LI G CK   F  A  LFE M+ ++ + PD   YNVL                       
Sbjct: 445 LIQGQCKKHEFDNAFRLFE-MMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVV 503

Query: 281 ---------IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
                    +DGF + G  D A  ++E M N GC  + + Y+ L+   CK+ KL EA  +
Sbjct: 504 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSI 563

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
            D+M    +K + + YT +I+   + G+ D A  +  EM   G K    T+ + +   C+
Sbjct: 564 LDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCK 623

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G+IEEA  ++ ++  DG+  +  +Y + +N     G +++A   L+ M+     P+Y T
Sbjct: 624 IGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWT 683

Query: 452 SNELLVRLCKAGMAEDAAIALFG----------------LVEMGFKPESDSWALLVELIC 495
              LL    K  + +   +   G                +V+ G  P + +++ ++   C
Sbjct: 684 YWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFC 743

Query: 496 RGRKLLFAFELLDELVIKE 514
           +  +L  A  L D +  K+
Sbjct: 744 KATRLEEACVLFDHMRGKD 762



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/482 (22%), Positives = 203/482 (42%), Gaps = 54/482 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE+F  + E +G   N  TY++++  L + +K     A++ +M  +        +  L+
Sbjct: 388 ALEVFRLM-EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLI 446

Query: 138 KHFSNCSLHE-----RVLEMFHK-------------IHPITREKPSLKAISTCLN---LL 176
           +    C  HE     R+ EM  +              H + +   + +A S  +    +L
Sbjct: 447 Q--GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVL 504

Query: 177 IESNQVDLAQNFLKYSNQHLRL-----------KPNTCIFNILIKHHCKRGTLESAFEVL 225
            +     L   F K  N                K ++  +++L++  CK+  L  A  +L
Sbjct: 505 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSIL 564

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
            +M  S +   N++ Y+ +I  + K G+   A  +F EM+S     P A TY V I  +C
Sbjct: 565 DQMTLSGVK-CNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH-KPSATTYTVFISSYC 622

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + G+++ A+ ++  M+ +G  P+V  Y   +NG    G +  A      M +   +P+  
Sbjct: 623 KIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYW 682

Query: 346 GYTTLINCFCRAGRVDE----------------ALELLKEMKERGCKADIVTFNIILGGL 389
            Y  L+  F +   VD                   +LL+ M + G     VT++ I+ G 
Sbjct: 683 TYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGF 742

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+  ++EEA  + + +    I  N+  Y +++   C      KA+  +  M+  GF PH 
Sbjct: 743 CKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHL 802

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLD 508
            + + L+V LC  G  + A      L+ M  +     +W +L + + +   + F  +LL 
Sbjct: 803 ESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLS 862

Query: 509 EL 510
            +
Sbjct: 863 AM 864



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 149/350 (42%), Gaps = 58/350 (16%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +G   ++ TY+ +L  L + KK     ++L QMT    K +   +  ++        H+ 
Sbjct: 535 EGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDH 594

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF-------------------- 188
              MF+++   +  KPS    +  ++   +  Q++ A++                     
Sbjct: 595 AKSMFNEMIS-SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFI 653

Query: 189 -----LKYSNQHLRL---------KPNTCIFNILIKHHCKRG----------------TL 218
                + Y ++             +PN   + IL+KH  K                   L
Sbjct: 654 NGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIEL 713

Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           ++ +++L+ M K  ++ P  +TYS++I G CK  R  EA  LF+ M  KD I P+   Y 
Sbjct: 714 DTVWQLLERMVKHGLN-PTAVTYSSIIAGFCKATRLEEACVLFDHMRGKD-ISPNEEIYT 771

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE---M 335
           +LI   C      +A   +  M   G  P++ +Y  L+ G C EG   +AK +F +   M
Sbjct: 772 MLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGM 831

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +++    + + +  L +   +AG VD   +LL  M+ R C+ D  T++++
Sbjct: 832 EDY--NHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMV 879


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 210/431 (48%), Gaps = 42/431 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QKG   +  TY +I+D L + +  +  + VLRQM  +  +  +G+    + H  +CS H 
Sbjct: 292 QKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVE-PDGLTYTAIIHGYSCSGHW 350

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +                                  + A+ F K +++ L   P    FN 
Sbjct: 351 K----------------------------------ESAKMFRKMTSKGL--IPGIVTFNS 374

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            +   CK G  + A E+ + M  ++   P+L++YS L+ G    GRF +   LF  M  K
Sbjct: 375 FMSSLCKHGRSKDAEEIFQYMT-TKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             I+ +   +N+LI    + G +D A  +   M+  G  P+V  Y+TL++ FC+ G+L +
Sbjct: 434 G-IVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLAD 492

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC-KADIVTFNIIL 386
           A E F +M +  L+P+T+ Y +LI+ FC  G + +A EL+ EM  +G  + +IV F+ I+
Sbjct: 493 AMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSII 552

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC EG++ +A  +   + + G      ++  +++  C  G++EKA  +L  M+  G  
Sbjct: 553 HSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE 612

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P   T N L+   CK+G  +D  I    ++    KP + +++++++ +    +   A ++
Sbjct: 613 PDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKM 672

Query: 507 LDELVIKESGT 517
             E++  +SGT
Sbjct: 673 FHEMI--DSGT 681



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 200/408 (49%), Gaps = 6/408 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EIF  ++  KG   +  +Y+ +L   A   +F  ++ +   M  +    +   F  L+
Sbjct: 388 AEEIFQYMT-TKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILI 446

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-HL 196
              +   + +  + +F ++      +P +   ST ++      +  LA    K+S    +
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQG-QGVRPDVVTYSTLISAFCRMGR--LADAMEKFSQMISI 503

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            L+PNT +++ LI   C  G L  A E++ EM    +  PN++ +S++I  LC  GR  +
Sbjct: 504 GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++F  ++      P  +T+N LIDG+C  GK+++A  +++ M + G  P+V  Y TL+
Sbjct: 564 AHDVFNLVIHIGD-RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLV 622

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+CK GK+ +   +F EM +  +KP T+ Y+ +++    AGR   A ++  EM + G  
Sbjct: 623 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTA 682

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            DI T+ I+L GLCR    +EA+ +  KL       +      V+N   +    E+A +L
Sbjct: 683 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDL 742

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
              +   G +P+ +T   ++  L K G  E+A      + + G  P S
Sbjct: 743 FAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSS 790



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 176/345 (51%), Gaps = 2/345 (0%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM- 228
           +T L  L  + + D A + L +    L   PN   +N +IK  C     + A ++++ M 
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMA 254

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K+     P++++++T+I G  K G   +A  L  EMV K  + PD +TYN ++D  C+  
Sbjct: 255 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKG-VEPDVVTYNSIVDALCKAR 313

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            +D+A+ ++  M + G  P+   YT +++G+   G  +E+ ++F +M +  L P  + + 
Sbjct: 314 AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFN 373

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           + ++  C+ GR  +A E+ + M  +G   D+V+++I+L G   EG+  +   +   +   
Sbjct: 374 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           GI  N   + I+++   ++G +++A+ +   M  +G  P   T + L+   C+ G   DA
Sbjct: 434 GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADA 493

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                 ++ +G +P +  +  L+   C    L+ A EL+ E++ K
Sbjct: 494 MEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSK 538



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 157/315 (49%), Gaps = 1/315 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+  T   N  +K  C     + A +VL          PN I+Y+T+I  LC + R +EA
Sbjct: 187 LRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEA 246

Query: 258 IELFEEMVSK-DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           +++ + M  +  +  PD +++N +I GF + G+V +A  ++  M   G  P+V  Y +++
Sbjct: 247 LDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIV 306

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +  CK   + +A+ V  +M +  ++PD + YT +I+ +  +G   E+ ++ ++M  +G  
Sbjct: 307 DALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLI 366

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             IVTFN  +  LC+ G+ ++A  + + +   G   +  SY I+L+    +G       L
Sbjct: 367 PGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNL 426

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M  +G + +    N L+    K GM ++A +    +   G +P+  +++ L+   CR
Sbjct: 427 FHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCR 486

Query: 497 GRKLLFAFELLDELV 511
             +L  A E   +++
Sbjct: 487 MGRLADAMEKFSQMI 501



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 12/360 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ +F  +  Q G   +  TY+T++    R  +         QM     + +  ++ +L+
Sbjct: 458 AMLVFTEMQGQ-GVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLI 516

Query: 138 K----HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
                H       E V EM  K  P    +P++   S+ ++ L    +V  A +      
Sbjct: 517 HGFCMHGDLVKAKELVSEMMSKGIP----RPNIVFFSSIIHSLCNEGRVMDAHDVFNLV- 571

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            H+  +P    FN LI  +C  G +E AF VL  M    +  P+++TY+TL+ G CK+G+
Sbjct: 572 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE-PDVVTYNTLVSGYCKSGK 630

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             + + LF EM+ K ++ P  +TY++++DG    G+   AKK+   M ++G   ++  Y 
Sbjct: 631 IDDGLILFREMLHK-KVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYK 689

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+ G C+     EA  +F ++     K D     T+IN   +  R +EA +L   +   
Sbjct: 690 ILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTS 749

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   ++ T+ +++  L +EG +EEA  M   +   G   +      ++    QKG++ KA
Sbjct: 750 GLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 40/256 (15%)

Query: 276 TYNVLIDGFCRGGKVD-----------------------------RAKK-------IMEF 299
           TY +L+D  CR  + D                              AK+       ++  
Sbjct: 158 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHR 217

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRA 357
           M + GC PN  +Y T++   C + + QEA ++   M  +     PD + + T+I+ F + 
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G V +A  L+ EM ++G + D+VT+N I+  LC+   +++A  +L ++   G+  +  +Y
Sbjct: 278 GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337

Query: 418 R-IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
             I+  +SC  G  +++ ++ R M  +G +P   T N  +  LCK G ++DA      + 
Sbjct: 338 TAIIHGYSCS-GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396

Query: 477 EMGFKPESDSWALLVE 492
             G  P+  S+++L+ 
Sbjct: 397 TKGHMPDLVSYSILLH 412



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 3/188 (1%)

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE-L 366
           +V  Y  LM+  C+  +       F  +    L+  TI   T + C C A R DEA++ L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG--IYLNKASYRIVLNFS 424
           L  M + GC  + +++N ++  LC + + +EAL M++++  +G     +  S+  V++  
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
            ++GE+ KA  L+  M+ +G  P   T N ++  LCKA   + A + L  +V+ G +P+ 
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 485 DSWALLVE 492
            ++  ++ 
Sbjct: 335 LTYTAIIH 342


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 165/310 (53%), Gaps = 2/310 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           + C +N+ I + C+       + +LK M+++ M YPN ITY+TLI G  + G+   A ++
Sbjct: 244 DVCTYNVFIDNLCRDSRSAKGYLLLKRMRRN-MVYPNEITYNTLISGFVREGKIEVATKV 302

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+EM S   +LP+++TYN LI G C  G +  A ++M+ M ++G  PN   Y  L+NG  
Sbjct: 303 FDEM-SLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLY 361

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K  +      + + M+   ++   I YT +I+  C+ G ++EA++LL +M +     D+V
Sbjct: 362 KNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVV 421

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           TF++++ G  R GKI  A  ++ K++  G+  N   Y  ++   C+ G L++A+    +M
Sbjct: 422 TFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVM 481

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G +  + T N L+   C+ G  E+A   +  +  MG  P S ++  ++         
Sbjct: 482 NHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDA 541

Query: 501 LFAFELLDEL 510
           L AF + D++
Sbjct: 542 LKAFSVFDKM 551



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 150/317 (47%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN+  +N LI  HC  G +  A  ++  M    +  PN +TY  L++GL KN  F   
Sbjct: 311 LLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLR-PNEVTYGALLNGLYKNAEFGMV 369

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + E M     +    ++Y  +IDG C+ G ++ A ++++ M     NP+V  ++ L+N
Sbjct: 370 SSILERM-RMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLIN 428

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GF + GK+  AKE+  +M    L P+ I Y+TLI  +C+ G + EAL     M   G  A
Sbjct: 429 GFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVA 488

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T N+++   CR GK+EEA   +  +   G+  N  ++  ++N     G+  KA  + 
Sbjct: 489 DHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVF 548

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P   T   LL  LC  G   +A      L  +    ++  +   +   CR 
Sbjct: 549 DKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRS 608

Query: 498 RKLLFAFELLDELVIKE 514
             L  A  L++E+V  +
Sbjct: 609 GNLSDAIALINEMVTND 625



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 202/457 (44%), Gaps = 62/457 (13%)

Query: 78  ALEIFNTVSEQKGFNHNNATYA--TILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           AL+  N V +Q     N+ T+   T    L R + +      L+ +       +  +F  
Sbjct: 35  ALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLPIGLNS-VFGA 93

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQ 194
           LM+ +  C+ +  V ++                I  CL N ++     D  Q F  Y   
Sbjct: 94  LMETYPICNSNPAVFDLL---------------IRVCLRNRMVG----DAVQTF--YLMG 132

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              L P+    N+++    K   ++  +   K M    +  P++ T++ L++ LC+ G+F
Sbjct: 133 FRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGIC-PDVATFNILLNALCERGKF 191

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-----CNPNV 309
           + A  L  +M  +  + P A+TYN L++ +C+ G+   A ++++ M + G     C  NV
Sbjct: 192 KNAGFLLRKM-EESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNV 250

Query: 310 F------------------------------NYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           F                               Y TL++GF +EGK++ A +VFDEM  F 
Sbjct: 251 FIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFN 310

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
           L P++I Y TLI   C  G + EAL L+  M   G + + VT+  +L GL +  +     
Sbjct: 311 LLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVS 370

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +LE++   G+ ++  SY  +++  C+ G LE+A++LL  ML     P   T + L+   
Sbjct: 371 SILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGF 430

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + G   +A   +  + + G  P    ++ L+   C+
Sbjct: 431 FRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCK 467



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/430 (23%), Positives = 186/430 (43%), Gaps = 9/430 (2%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
            V    G   ++ T   ++    RY K E  +  +  M+      +   F  ++  + N 
Sbjct: 479 AVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNS 538

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
               +   +F K++      PSL      L  L     ++ A  F       LR  PN  
Sbjct: 539 GDALKAFSVFDKMNSFG-HFPSLFTYGGLLKGLCIGGHINEALKFF----HRLRCIPNAV 593

Query: 204 ---IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
              IFN  +   C+ G L  A  ++ EM  +    P+  TY+ LI GLCK G+   A+ L
Sbjct: 594 DNVIFNTKLTSTCRSGNLSDAIALINEMVTNDF-LPDNFTYTNLIAGLCKKGKIVAALLL 652

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             + + K  + P+   Y  L+DG  + G    A  I E M N    P+   +  +++ + 
Sbjct: 653 SGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYS 712

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++GK  +  ++   MK+  L  +   Y  L++ + +   +     L K+M   G   D  
Sbjct: 713 RKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKF 772

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           +++ ++ G C+    + A+ +L  +  +G  +++ ++ +++   C++ E++KA EL++ M
Sbjct: 773 SWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQM 832

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                +P+  T N L   L +      A   L  L+E G  P +  +  L+  +CR   +
Sbjct: 833 NQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNI 892

Query: 501 LFAFELLDEL 510
             A +L DE+
Sbjct: 893 KGAMKLQDEM 902



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 155/309 (50%), Gaps = 1/309 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  LI   CK+G + +A  +  +  +  +  PN   Y++L+DGL K+G  R A+ 
Sbjct: 628 PDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALY 687

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +FEEM++KD + PD + +NV+ID + R GK  +   I+  MK+     N+  Y  L++G+
Sbjct: 688 IFEEMLNKD-VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGY 746

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K   +     ++ +M      PD   + +LI  +C++   D A+++L+ +   G   D 
Sbjct: 747 AKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDR 806

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            TFN+++   C   ++++A  +++++    +  N  +Y  + N   +  +  KA  +L++
Sbjct: 807 FTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQV 866

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           +L  G +P       L+  +C+ G  + A      +  +G    + + + +V  +   +K
Sbjct: 867 LLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKK 926

Query: 500 LLFAFELLD 508
           +  A  +LD
Sbjct: 927 IENAIWVLD 935



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 30/402 (7%)

Query: 41   DPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYAT 100
            +P V TS   VD       + HG A          + AL IF  +   K    +   +  
Sbjct: 665  NPAVYTS--LVDG-----LLKHGHA----------RAALYIFEEML-NKDVEPDTVAFNV 706

Query: 101  ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI--HP 158
            I+D+ +R  K   V+ +L  M  +   F+   +  L+  ++      R   ++  +  H 
Sbjct: 707  IIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHG 766

Query: 159  ITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
               +K S  ++    C     +S   D+A   L++      +  +   FN+LI   C+R 
Sbjct: 767  FLPDKFSWHSLILGYC-----QSKSFDVAIKILRWITLEGHV-IDRFTFNMLITKFCERN 820

Query: 217  TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
             ++ AFE++K+M +  M  PN+ TY+ L +GL +   F +A  + + ++    + P    
Sbjct: 821  EMKKAFELVKQMNQF-MVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSV-PTNKQ 878

Query: 277  YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
            Y  LI+G CR G +  A K+ + MK  G + +    + ++ G     K++ A  V D M 
Sbjct: 879  YITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLML 938

Query: 337  NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               + P    +TTL++ +C+   V +ALEL   M+    K D+V +N+++ GLC  G IE
Sbjct: 939  EMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIE 998

Query: 397  EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             A  + E++    ++ N + Y ++++  C      ++ +LLR
Sbjct: 999  AAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLR 1040



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 158/315 (50%), Gaps = 6/315 (1%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            ++P+T  FN++I  + ++G      ++L  MK   + + NL TY+ L+ G  K       
Sbjct: 697  VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCF-NLATYNILLHGYAKRHAMARC 755

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              L+++M+ +   LPD  +++ LI G+C+    D A KI+ ++   G   + F +  L+ 
Sbjct: 756  FMLYKDMI-RHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLIT 814

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             FC+  ++++A E+  +M  F++ P+   Y  L N   R     +A  +L+ + E G   
Sbjct: 815  KFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVP 874

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
                +  ++ G+CR G I+ A+ + +++   GI  +  +   ++       ++E AI +L
Sbjct: 875  TNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVL 934

Query: 438  RLMLCRGFLPHYATSNELLVRLCK-AGMAEDAAIALFGLVEM-GFKPESDSWALLVELIC 495
             LML    +P  AT   L+   CK A +A+  A+ L  ++E    K +  ++ +L+  +C
Sbjct: 935  DLMLEMQIIPTVATFTTLMHVYCKEANVAK--ALELRSIMEHCHVKLDVVAYNVLISGLC 992

Query: 496  RGRKLLFAFELLDEL 510
                +  AF+L +E+
Sbjct: 993  ANGDIEAAFKLYEEM 1007



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 136/286 (47%), Gaps = 4/286 (1%)

Query: 88   QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            + GF  +  ++ +++    + K F+    +LR +T E        F  L+  F   +  +
Sbjct: 764  RHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMK 823

Query: 148  RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            +  E+  +++      P++   +   N LI ++    A   L+   +   + P    +  
Sbjct: 824  KAFELVKQMNQFM-VIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSV-PTNKQYIT 881

Query: 208  LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
            LI   C+ G ++ A ++  EMK   +S  N +  S ++ GL  + +   AI + + M+  
Sbjct: 882  LINGMCRVGNIKGAMKLQDEMKTLGISSHN-VAMSAIVRGLANSKKIENAIWVLDLMLEM 940

Query: 268  DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             QI+P   T+  L+  +C+   V +A ++   M++     +V  Y  L++G C  G ++ 
Sbjct: 941  -QIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEA 999

Query: 328  AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            A ++++EMK   L P+T  Y  LI+ FC      E+ +LL+++++R
Sbjct: 1000 AFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 101/236 (42%)

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
            +++LI    R   V  A +    M   G NP+V+    ++    KE K+      F  M
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
               + PD   +  L+N  C  G+   A  LL++M+E G     VT+N +L   C++G+ 
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           + A  +++ +   GI ++  +Y + ++  C+     K   LL+ M      P+  T N L
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +    + G  E A      +      P S ++  L+   C    +  A  L+D +V
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMV 342



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 9/177 (5%)

Query: 95   NATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER---VLE 151
            N  Y T+++ + R    +    +  +M       H      +++  +N    E    VL+
Sbjct: 876  NKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLD 935

Query: 152  MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
            +  ++  I    P++   +T +++  +   V  A   L+   +H  +K +   +N+LI  
Sbjct: 936  LMLEMQII----PTVATFTTLMHVYCKEANVAKALE-LRSIMEHCHVKLDVVAYNVLISG 990

Query: 212  HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
             C  G +E+AF++ +EMK+  + +PN   Y  LID  C      E+ +L  ++  ++
Sbjct: 991  LCANGDIEAAFKLYEEMKQRDL-WPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRE 1046


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 150/259 (57%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +   A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDGA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 NGLFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD   YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 411 KEMQRDGHAPSVVTYNVLM 429



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+  A  +FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ ++V   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEM 413



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 151/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 NGLFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+ F YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHAPSVVTYNVLMN 430



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDGANGLF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GLCK G  ++A +L +EM S   + PD  TY  L
Sbjct: 266 AMEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMKGLKPDKFTYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPDT  YT ++N FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVS-----------------KDQILPDALTYNV 279
            L +Y T+I  LC +    EA  L E +VS                 K     D   ++ 
Sbjct: 18  TLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSG 77

Query: 280 LIDGFCRGG-------------------KVDRAKKIME-FMKNN---------------G 304
           LI  +   G                     D  +K++E  MK                 G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K++ A G+ +++   G+  N  ++  +++  
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +  LP   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFE 338



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFAAVLETKGNQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD 108

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGF--------YEEILE----CGYPASLYFFNILMHRFCKDG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 157 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K++ A G+ +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 217 VLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G                                    L  A
Sbjct: 277 SLLPDLITYNTLIYGLCKKG-----------------------------------DLKQA 301

Query: 504 FELLDELVIK 513
            +L+DE+ +K
Sbjct: 302 HDLIDEMSMK 311


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   FN L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +   A
Sbjct: 159 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVE-PDVYTYSVLINGLCKESKIDGA 217

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +   + ++  Y TL+ 
Sbjct: 218 NELFDEMLDKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIY 276

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A+ + DEM+   LKPD I YTTLI+  C+ G ++ A E  K M +   + 
Sbjct: 277 GLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRL 336

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++    +LL
Sbjct: 337 DDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLL 396

Query: 438 RLMLCRGFLPHYAT 451
           + M   G +P   T
Sbjct: 397 KEMQRDGHVPSVVT 410



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N L++G+ R G +D 
Sbjct: 123 GYPASLYFFNILMHRFCKEGEIRVARSVFDA-ITKWGLRPSVVSFNTLMNGYIRLGDLDE 181

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+  A E+FDEM +  L P+ + +TTLI+
Sbjct: 182 GFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLID 241

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +   AD++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 242 GHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKP 301

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 302 DKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKML 361

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 362 REMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 399



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 144/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVS-----------------KDQILPDALTYNV 279
            L +Y T+I  LC +    EA  L + +VS                 K  +  D   ++ 
Sbjct: 4   TLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVFSG 63

Query: 280 LIDGFCRGG-------------------KVDRAKKIME-FMKNN---------------G 304
           LI  +   G                     D  KK++E  MK                 G
Sbjct: 64  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECG 123

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCKEG+++ A+ VFD +  + L+P  + + TL+N + R G +DE  
Sbjct: 124 YPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 183

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E KI+ A  + +++   G+  N  ++  +++  
Sbjct: 184 RLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGH 243

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +       T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 244 CKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDK 303

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 304 ITYTTLIDGCCKEGDLETAFE 324



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 128/300 (42%), Gaps = 40/300 (13%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +  S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 37  KGSASAVFAAILETKGTLRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVP-- 92

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  KK++E +           Y  L+ GF KE  + E       
Sbjct: 93  ---------------FDTCKKVLEHLMK-------LKYFKLVWGFYKE--ILECG----- 123

Query: 335 MKNFLLKPDTIGY-TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
                  P ++ +   L++ FC+ G +  A  +   + + G +  +V+FN ++ G  R G
Sbjct: 124 ------YPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLG 177

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            ++E   +   +   G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T  
Sbjct: 178 DLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFT 237

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            L+   CK G  + A      ++      +  ++  L+  +C+   L  A  L+DE+ +K
Sbjct: 238 TLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMK 297


>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 369

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 180/335 (53%), Gaps = 3/335 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +   S+ +N    SN +  A  ++    + + +K +  +  ILI   CK   +  A 
Sbjct: 10  EPDIVTASSLVNGFCLSNSIKDAV-YVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           EVLK MK   +S PN++TYS+LI GLCK+GR  +A     EM SK +I P+ +T++ LID
Sbjct: 69  EVLKRMKDRGIS-PNVVTYSSLITGLCKSGRLADAERRLHEMDSK-KINPNVITFSALID 126

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
            + + GK+ +   + + M     +PNVF Y++L+ G C   ++ EA ++ D M +    P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           + + Y+TL N F ++ RVD+ ++LL +M +RG  A+ V+ N ++ G  + GKI+ ALG+ 
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             +  +G+  N  SY IVL      GE+EKA+     M          T   ++  +CKA
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            M ++A    + L     +P+  ++ +++  + R 
Sbjct: 307 CMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRA 341



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 109/207 (52%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P++   ++L+NGFC    +++A  V  +M+   +K D +  T LI+  C+   V  A
Sbjct: 8   GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           LE+LK MK+RG   ++VT++ ++ GLC+ G++ +A   L ++    I  N  ++  +++ 
Sbjct: 68  LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             ++G+L K   + ++M+     P+  T + L+  LC     ++A   L  ++  G  P 
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
             +++ L     +  ++    +LLD++
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDM 214



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 88/180 (48%)

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           +M    ++PD +  ++L+N FC +  + +A+ +  +M++ G K D+V   I++  LC+  
Sbjct: 3   KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            +  AL +L+++   GI  N  +Y  ++   C+ G L  A   L  M  +   P+  T +
Sbjct: 63  LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            L+    K G           +++M   P   +++ L+  +C   ++  A ++LD ++ K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 182/336 (54%), Gaps = 22/336 (6%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +  +  +++ +I   CK   +  A+E+  EM   ++S P ++T ++LI G C  G+F+EA
Sbjct: 207 VSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRIS-PTVVTLNSLIYGYCIVGQFKEA 265

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM- 316
             L  EMV K+ I PD  T+N+L+D  C+ GK+  AK  +  M   G  P+V  Y++LM 
Sbjct: 266 FGLLREMVLKN-INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMD 324

Query: 317 -------------------NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
                              NGFCK   + +A  +F EM+   + PDT+ Y +LI+  C++
Sbjct: 325 GYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKS 384

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           GR+  A EL+ EM++ G  ADI+T+N ++  LC+   +++A+ +++K+   GI L+  +Y
Sbjct: 385 GRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTY 444

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I+++  C++G L+ A  + + +L +G+     T   ++  LC  G+  +A   L  + +
Sbjct: 445 NILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMED 504

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            G  P++ +   ++  +    K   A +LL E++ +
Sbjct: 505 NGCVPDAVTCETIIRALFENDKNERAEKLLREMIAR 540



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 157/282 (55%), Gaps = 23/282 (8%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           R+ P     N LI  +C  G  + AF +L+EM    ++ P++ T++ L+D LCK G+ +E
Sbjct: 241 RISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNIN-PDVYTFNILVDALCKEGKIKE 299

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN---------- 306
           A      M+ K+ ++PD +TY+ L+DG+C   +V++AK +   + N  C           
Sbjct: 300 AKSGIAVMM-KEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSL 358

Query: 307 ----------PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
                     P+   Y +L++G CK G++  A E+ DEM++     D I Y +LI+  C+
Sbjct: 359 FYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCK 418

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
              VD+A+ L+K++K++G + D+ T+NI++ GLC++G++++A  + + L   G  L   +
Sbjct: 419 NHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWT 478

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           Y I++N  C +G L +A  LL  M   G +P  A + E ++R
Sbjct: 479 YTIMINGLCLEGLLNEAETLLSKMEDNGCVPD-AVTCETIIR 519



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 172/340 (50%), Gaps = 26/340 (7%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           +KPN    +ILI  +C  G +  AF +  ++ K  M Y PN IT +TL+ G C N + +E
Sbjct: 102 IKPNIVSLSILINCYCHLGQMRFAFSIFAKILK--MGYHPNTITLTTLVKGFCLNHKVKE 159

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+  F + V       + ++Y  LI+G C+ G+   A +++  ++    + +V  Y+T++
Sbjct: 160 ALH-FHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTII 218

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G CK+  + +A E++ EM    + P  +   +LI  +C  G+  EA  LL+EM  +   
Sbjct: 219 DGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNIN 278

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY------------------LNKAS-- 416
            D+ TFNI++  LC+EGKI+EA   +  +  +G+                   +NKA   
Sbjct: 279 PDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV 338

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y IV+N  C+   ++KA+ L   M CR   P   T N L+  LCK+G    A   +  + 
Sbjct: 339 YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMR 398

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           + G   +  ++  L++ +C+   +  A  L+ +  IK+ G
Sbjct: 399 DSGQPADIITYNSLIDALCKNHHVDKAIALVKK--IKDQG 436



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 186/378 (49%), Gaps = 26/378 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           GF+ N  +Y T+++ L +  +  A   +LRQ+  +       ++  ++       L    
Sbjct: 171 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDA 230

Query: 150 LEMFHKIHPIT-REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
            E++ ++  IT R  P++  +++ +       Q   A   L+       + P+   FNIL
Sbjct: 231 YELYSEM--ITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLK-NINPDVYTFNIL 287

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG--------------------L 248
           +   CK G ++ A   +  M K  +  P+++TYS+L+DG                     
Sbjct: 288 VDALCKEGKIKEAKSGIAVMMKEGV-MPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGF 346

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           CK     +A+ LF EM  + +I PD +TYN LIDG C+ G++  A ++++ M+++G   +
Sbjct: 347 CKIKMVDKALSLFYEMRCR-RIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPAD 405

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           +  Y +L++  CK   + +A  +  ++K+  ++ D   Y  LI+  C+ GR+ +A  + +
Sbjct: 406 IITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQ 465

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           ++  +G    + T+ I++ GLC EG + EA  +L K+  +G   +  +   ++    +  
Sbjct: 466 DLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFEND 525

Query: 429 ELEKAIELLRLMLCRGFL 446
           + E+A +LLR M+ RG L
Sbjct: 526 KNERAEKLLREMIARGLL 543



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 132/260 (50%), Gaps = 1/260 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P++I +  ++  L K   +   I LF ++   + I P+ ++ ++LI+ +C  G++  A  
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQL-EFNGIKPNIVSLSILINCYCHLGQMRFAFS 127

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           I   +   G +PN    TTL+ GFC   K++EA    D +       + + Y TLIN  C
Sbjct: 128 IFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLC 187

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G    AL++L++++ +    D+V ++ I+ GLC++  + +A  +  ++    I     
Sbjct: 188 KIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVV 247

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +   ++   C  G+ ++A  LLR M+ +   P   T N L+  LCK G  ++A   +  +
Sbjct: 248 TLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVM 307

Query: 476 VEMGFKPESDSWALLVELIC 495
           ++ G  P+  +++ L++  C
Sbjct: 308 MKEGVMPDVVTYSSLMDGYC 327



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 97/198 (48%)

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           NG  PN+ + + L+N +C  G+++ A  +F ++      P+TI  TTL+  FC   +V E
Sbjct: 100 NGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKE 159

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           AL     +   G   + V++  ++ GLC+ G+   AL ML ++    +  +   Y  +++
Sbjct: 160 ALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIID 219

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             C+   +  A EL   M+ +   P   T N L+   C  G  ++A   L  +V     P
Sbjct: 220 GLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINP 279

Query: 483 ESDSWALLVELICRGRKL 500
           +  ++ +LV+ +C+  K+
Sbjct: 280 DVYTFNILVDALCKEGKI 297



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 64/152 (42%)

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
            VD+ +     M        ++ F  IL  L +       + +  +L ++GI  N  S  
Sbjct: 51  HVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLS 110

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I++N  C  G++  A  +   +L  G+ P+  T   L+   C     ++A      ++ +
Sbjct: 111 ILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLAL 170

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           GF     S+  L+  +C+  +   A ++L ++
Sbjct: 171 GFHFNQVSYGTLINGLCKIGETRAALQMLRQI 202


>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
          Length = 691

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 218/471 (46%), Gaps = 36/471 (7%)

Query: 57  SRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA 116
           S+ IS    +  ++  K P   L  F+ VS  KGF+H   ++  +L+ L R +       
Sbjct: 63  SQTISRTTVLQTLRLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARN 121

Query: 117 VLRQMTYET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
            L  +   +    K  +  F +L++ + N  L +  +++F  +  +    PS+   ++ L
Sbjct: 122 FLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS-PSVLTFNSLL 180

Query: 174 NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM----- 228
           ++L++  +  +A +      +   + P++  FN LI   CK   ++ AF + K+M     
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGK 240

Query: 229 ------------KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
                       KK+   +PN+++Y+TL+ G C      EA+ +F +M+S+  + P+A+T
Sbjct: 241 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG-LKPNAVT 299

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCN---PNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           YN LI G     + D  K I+    N+      P+   +  L+   C  G L  A +VF 
Sbjct: 300 YNTLIKGLSEAHRYDEIKDIL-IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 358

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-------GCKADIVTFNIIL 386
           EM N  L PD+  Y+ LI   C     D A  L  E+ E+        CK     +N + 
Sbjct: 359 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMF 418

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC  GK ++A  +  +L   G+  +  SY+ ++   C++G+ + A ELL LML R F+
Sbjct: 419 EYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFV 477

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW-ALLVELICR 496
           P   T   L+  L K G A  A   L  ++   + P + ++ ++L EL  R
Sbjct: 478 PDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKR 528



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 185/373 (49%), Gaps = 35/373 (9%)

Query: 173 LNLLIESNQVDLAQNFL----KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           L  L  +  +++A+NFL    + SN  ++L+     FN LI+ +   G  + + ++ + M
Sbjct: 107 LEFLGRARNLNVARNFLFSIERRSNGCVKLQDR--YFNSLIRSYGNAGLFQESVKLFQTM 164

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K+  +S P+++T+++L+  L K GR   A +LF+EM     + PD+ T+N LI+GFC+  
Sbjct: 165 KQMGIS-PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223

Query: 289 KVDRAKKIMEFM------------------KNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            VD A +I + M                  K    +PNV +YTTL+ G+C + ++ EA  
Sbjct: 224 MVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVL 283

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE--RGCKADIVTFNIILGG 388
           VF +M +  LKP+ + Y TLI     A R DE  ++L    +       D  TFNI++  
Sbjct: 284 VFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKA 343

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-- 446
            C  G ++ A+ + +++    ++ + ASY +++   C + E ++A  L   +  +  L  
Sbjct: 344 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 403

Query: 447 -----PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
                P  A  N +   LC  G  + A      L++ G + +  S+  L+   CR  K  
Sbjct: 404 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFK 462

Query: 502 FAFELLDELVIKE 514
            A+ELL  ++ +E
Sbjct: 463 PAYELLVLMLRRE 475



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 170/361 (47%), Gaps = 22/361 (6%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESA 221
           KP+    +T +  L E+++ D  ++ L   N       P+ C FNILIK HC  G L++A
Sbjct: 294 KPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAA 353

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM------VSKDQILPDAL 275
            +V +EM   ++ +P+  +YS LI  LC    F  A  LF E+      + KD+  P A 
Sbjct: 354 MKVFQEMLNMKL-HPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAA 412

Query: 276 TYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            YN + +  C  GK  +A+K+  + MK    +P   +Y TL+ G C+EGK + A E+   
Sbjct: 413 AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP--SYKTLITGHCREGKFKPAYELLVL 470

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M      PD   Y  LI+   + G    A + L+ M          TF+ +L  L +   
Sbjct: 471 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 530

Query: 395 IEEALG----MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
             E+      MLEK     I L+    R++ + S QK   EKA  ++RL+   G+L    
Sbjct: 531 ANESFCLVTLMLEKRIRQNIDLSTQVVRLLFS-SAQK---EKAFLIVRLLYDNGYL---V 583

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              ELL  LC+     DA   +   +E     + D+   ++E +C+ ++   AF L +EL
Sbjct: 584 KMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNEL 643

Query: 511 V 511
           V
Sbjct: 644 V 644


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 174/315 (55%), Gaps = 4/315 (1%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +NIL+K  C+      A  +L+EM+++ +  P++++Y+T+I G C+     +A++L
Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSL-MPDVVSYNTVIRGFCEGKELEKALQL 199

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             EM          +T+ +LID FC+ GK+D A  +++ MK+ G   ++  YT+L+ GFC
Sbjct: 200 ANEMQGSGCSWS-LVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFC 258

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
             G+L   K +FDE+      P  I Y TLI  FC+ GR+ EA E+ + M ERG + ++ 
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVY 318

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+  ++ GLC  GK +EAL +L  +       N  +Y I++N  C+   +  A+E++ LM
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELM 378

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG--FKPESDSWALLVELICRGR 498
             R   P   T N LL  LC  G  ++A+  L+ +++      P+  S+  L+  +C+G 
Sbjct: 379 KKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGN 438

Query: 499 KLLFAFELLDELVIK 513
           +L  A ++ D LV K
Sbjct: 439 RLHQALDIYDLLVEK 453



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 168/312 (53%), Gaps = 4/312 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           + ILI   CK G ++ A  +LKEMK   +   +LI Y++LI G C  G       LF+E+
Sbjct: 215 WGILIDAFCKAGKMDEAMGLLKEMKHKGLE-ADLIVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + +    P A+TYN LI GFC+ G++  A +I EFM   G  PNV+ YT L++G C  GK
Sbjct: 274 LERGDS-PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGK 332

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
            +EA ++ + M     +P+ + Y  +IN  C+   V +ALE+++ MK+R  + D +T+N 
Sbjct: 333 TKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNS 392

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNK--ASYRIVLNFSCQKGELEKAIELLRLMLC 442
           +LGGLC +G ++EA  +L  +  D  Y +    S+  +++  C+   L +A+++  L++ 
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVE 452

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
           +       T+N LL    K+G    A      +      P SD++  +++  C+   L  
Sbjct: 453 KLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNV 512

Query: 503 AFELLDELVIKE 514
           A  LL ++ + E
Sbjct: 513 AKGLLCKMRLSE 524



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 170/295 (57%), Gaps = 3/295 (1%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  VL  M K   ++ N+  Y+ L+ GLC+N  F +A+ L  EM  ++ ++PD ++YN +
Sbjct: 126 AHGVLALMLKRGFAF-NVYNYNILLKGLCRNLEFGKAVSLLREM-RQNSLMPDVVSYNTV 183

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I GFC G ++++A ++   M+ +GC+ ++  +  L++ FCK GK+ EA  +  EMK+  L
Sbjct: 184 IRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGL 243

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           + D I YT+LI  FC  G +D    L  E+ ERG     +T+N ++ G C+ G+++EA  
Sbjct: 244 EADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASE 303

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           + E +   G+  N  +Y  +++  C  G+ ++A++LL LML +   P+  T N ++ +LC
Sbjct: 304 IFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLC 363

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           K  +  DA   +  + +   +P++ ++  L+  +C    L  A +LL  L++K+S
Sbjct: 364 KDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLL-YLMLKDS 417



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 223/453 (49%), Gaps = 45/453 (9%)

Query: 71  CE-KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH 129
           CE KE + AL++ N + +  G + +  T+  ++D   +  K +    +L++M ++  +  
Sbjct: 188 CEGKELEKALQLANEM-QGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEAD 246

Query: 130 EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
             ++ +L++ F +C   +R   +F ++     + P     +T +    +  ++  A    
Sbjct: 247 LIVYTSLIRGFCDCGELDRGKALFDEVLE-RGDSPCAITYNTLIRGFCKLGRLKEASEIF 305

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
           ++  +   ++PN   +  LI   C  G  + A ++L  M +     PN++TY+ +I+ LC
Sbjct: 306 EFMMER-GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD-EEPNVVTYNIIINKLC 363

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNP 307
           K+    +A+E+ E ++ K +  PD +TYN L+ G C  G +D A K++  M  +    +P
Sbjct: 364 KDSLVADALEIVE-LMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFD---------------------------------- 333
           +V ++  L++G CK  +L +A +++D                                  
Sbjct: 423 DVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELW 482

Query: 334 -EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            ++ N  + P++  YTT+I+ FC+ G ++ A  LL +M+       +  +N +L  LC++
Sbjct: 483 KQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKK 542

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G +++A  + E++  D  + +  S+ I+++ S + G+++ A  LL  M   G  P   T 
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTY 602

Query: 453 NELLVRLCKAGMAEDAAIALFG-LVEMGFKPES 484
           ++L+ R  K G   D AI+ F  +++ GF+P++
Sbjct: 603 SKLINRFLKLGYL-DEAISFFDKMIDSGFEPDA 634



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 161/296 (54%), Gaps = 3/296 (1%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           E+P++   +  +N L + + V  A   ++   +  R +P+   +N L+   C +G L+ A
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKR-RTRPDNITYNSLLGGLCAKGDLDEA 406

Query: 222 FEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
            ++L  M K S  + P++I+++ LI GLCK  R  +A+++++ +V K     D +T N+L
Sbjct: 407 SKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGA-GDIVTTNIL 465

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           ++   + G V++A ++ + + N+   PN   YTT+++GFCK G L  AK +  +M+   L
Sbjct: 466 LNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL 525

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P    Y  L++  C+ G +D+A  L +EM+      D+++FNI++ G  + G I+ A  
Sbjct: 526 PPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAES 585

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +L  + + G+  +  +Y  ++N   + G L++AI     M+  GF P     + +L
Sbjct: 586 LLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVL 641



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 136/258 (52%), Gaps = 1/258 (0%)

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A   + +M+  D  + + ++ + L++ F +  K   A  ++  M   G   NV+NY  L+
Sbjct: 91  AFSFYRKMLETDTFI-NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILL 149

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            G C+  +  +A  +  EM+   L PD + Y T+I  FC    +++AL+L  EM+  GC 
Sbjct: 150 KGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCS 209

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             +VT+ I++   C+ GK++EA+G+L+++ + G+  +   Y  ++   C  GEL++   L
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKAL 269

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              +L RG  P   T N L+   CK G  ++A+     ++E G +P   ++  L++ +C 
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCG 329

Query: 497 GRKLLFAFELLDELVIKE 514
             K   A +LL+ ++ K+
Sbjct: 330 VGKTKEALQLLNLMLQKD 347


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 150/259 (57%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQ-PDVYTYSVLINGLCKEXKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y  L+ 
Sbjct: 232 NELFDEMLVKG-LVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++  EM    LKPD I YTTLI+  C+ G +B A E    M E   + 
Sbjct: 291 GLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML  +   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 158/278 (56%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPXSLYFFNILMHRFCKDGDIRVAXSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  ++ ++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G L+ A E    M+             L+  LC+ G   DA   L
Sbjct: 316 DKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ +++   C+   +    +LL E+
Sbjct: 376 RXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 140/259 (54%), Gaps = 2/259 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+   CK G +  A  V   + K  +  P++++Y+TL++G  + G   E   L   M
Sbjct: 145 FNILMHRFCKDGDIRVAXSVFDAITKWGLR-PSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +   + PD  TY+VLI+G C+  K+D A ++ + M   G  PN   +TTL++G CK G+
Sbjct: 204 XASG-VQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 262

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y  LI   C+ G + +A +L+ EM  +G K D +T+  
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTT 322

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG ++ A     ++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 323 LIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVG 382

Query: 445 FLPHYATSNELLVRLCKAG 463
             P   T   ++   CK G
Sbjct: 383 LKPDAXTYTMIINEFCKKG 401



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 NELFDEMLVKGLV-PNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNXLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  ++  M   G  P+   YTTL++G CKEG L  A E    M    ++
Sbjct: 290 YGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+ M   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L +  ++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKEXKMDDANELF---DEMLVKGLVPNXVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+ LI GLCK G  ++A +L  EM S   + PD +TY  L
Sbjct: 266 AMEIYKQML-SQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEM-SMKGLKPDKITYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +B A +    M       +   YT L++G C+EG+  +A+++   M +  L
Sbjct: 324 IDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 149/302 (49%), Gaps = 25/302 (8%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+    F  + E K +Q S  ++  +S LI    ++G  R+AIE +          P  
Sbjct: 51  KGSASXVFAAILETKGTQRS--DIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFD 108

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         K+I+E     G   +++ +  LM+ FCK+G
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGF--------YKEILE----CGYPXSLYFFNILMHRFCKDG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A  VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 157 DIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 217 VLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G  + A   +  +   G KP+  ++  L++  C+   L  A
Sbjct: 277 SLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTA 336

Query: 504 FE 505
           FE
Sbjct: 337 FE 338



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/288 (20%), Positives = 114/288 (39%), Gaps = 44/288 (15%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
            L +Y T+I  LC +    EA  L + +VS                   R GK   +   
Sbjct: 18  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVS-------------------RKGKGSASXVF 58

Query: 297 MEFMKNNGCN-PNVFNYTTLMNGFCKEGKLQEAKEV------------FDEMKNFLLKPD 343
              ++  G    +++ ++ L+  + + G L++A E             FD  +  L    
Sbjct: 59  AAILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLM 118

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  L+  F             KE+ E G    +  FNI++   C++G I  A  + +
Sbjct: 119 KLKYFKLVWGF------------YKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFD 166

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +   G+  +  SY  ++N   + G+L++   L   M   G  P   T + L+  LCK  
Sbjct: 167 AITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEX 226

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             +DA      ++  G  P   ++  L++  C+  ++  A E+  +++
Sbjct: 227 KMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQML 274


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 170/315 (53%), Gaps = 2/315 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+  IFNILI  + K G ++ A     +M++ Q  +PN++TY T++D LC+ G+  +A+
Sbjct: 343 QPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQ-QGLHPNIVTYGTVMDALCRVGKVDDAM 401

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
             F+ ++S + + P+ + +  LI G C   K D+A+++   M   G  PN   + TL+N 
Sbjct: 402 SQFDRLIS-EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNH 460

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CKEG +  AK +FD M    ++ D I YTTLI+ +C  G+VDEA +LL+ M   G K +
Sbjct: 461 LCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPN 520

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            VT+N I+ G C+ G+IE+A  +  ++   G+      Y  +L+   Q   +  A EL  
Sbjct: 521 EVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYL 580

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M+  G      T N +L  LC+    +DA      L  + F  ++ ++ ++++ + +G 
Sbjct: 581 WMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGG 640

Query: 499 KLLFAFELLDELVIK 513
           +   A +L   L+ +
Sbjct: 641 RHDEAKDLFASLLAR 655



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 219/462 (47%), Gaps = 11/462 (2%)

Query: 54  RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           R  +      +A+S +  E  P  AL +FN +        +  TY+ ++   +R    + 
Sbjct: 61  RDTTSIFDLNSALSAVARE-SPAVALSLFNRMPRA-----DLCTYSIVIGCCSRAGHLDL 114

Query: 114 VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL 173
             A L ++           F  L+K   +       +++  +  P     P+  + +  L
Sbjct: 115 AFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILL 174

Query: 174 NLLIESNQVDLAQNFLKY---SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
             L + N+   A + L      +      P+   +  +I    + G L+ A+ +  EM  
Sbjct: 175 KGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLD 234

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             MS PN ITY+ L+ G C +G+ +EAI +F +M  +D + PD +TYN L+   C+ G+ 
Sbjct: 235 QGMS-PNCITYNCLLHGYCSSGKPKEAIGIFRKMC-RDGVEPDVVTYNTLMVYLCKNGRS 292

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
             A+K+ + M   G  P+   Y TL++G+  EG L +  ++ D M     +PD   +  L
Sbjct: 293 MEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNIL 352

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I  + + G VDEA+    +M+++G   +IVT+  ++  LCR GK+++A+   ++L  +G+
Sbjct: 353 IGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGL 412

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N   +R +++  C   + +KA EL   M+ RG  P+    N LL  LCK GM   A  
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKN 472

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
               +V +  + +  ++  L++  C   K+  A +LL+ +V+
Sbjct: 473 IFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 198/390 (50%), Gaps = 13/390 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+++  +KG   +++ Y T+L   A       +  +L  M     +    IF  L+
Sbjct: 295 ARKVFDSMV-KKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILI 353

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQN-FLKYSN 193
             ++   + +  +  F K+    R++   P++    T ++ L    +VD A + F +  +
Sbjct: 354 GAYAKHGMVDEAMLAFSKM----RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + L   PN  +F  LI   C     + A E+  EM    +  PN I ++TL++ LCK G 
Sbjct: 410 EGL--TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGIC-PNTIFFNTLLNHLCKEGM 466

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              A  +F+ MV  D +  D +TY  LIDG+C  GKVD A K++E M  +G  PN   Y 
Sbjct: 467 VTRAKNIFDLMVRVD-VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYN 525

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T++NG+CK G++++A  +F +M +  + P  + Y+T+++   +  R+  A EL   M + 
Sbjct: 526 TIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKC 585

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K  I T+NIIL GLC+    ++AL M   L     +L   ++ I+++   + G  ++A
Sbjct: 586 GIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEA 645

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            +L   +L RG +P+  T   ++  L + G
Sbjct: 646 KDLFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 5/207 (2%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL-LKEM 370
           Y+ ++    + G L  A      +         I ++ L+   C   R  +A+++ L+ M
Sbjct: 99  YSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRM 158

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GIYLNKASYRIVLNFSCQ 426
              GC  +  ++NI+L GLC E + ++AL +L  +  D    G   +  SY  V+N   +
Sbjct: 159 PALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLR 218

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           +G+L+KA  L   ML +G  P+  T N LL   C +G  ++A      +   G +P+  +
Sbjct: 219 EGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVT 278

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           +  L+  +C+  + + A ++ D +V K
Sbjct: 279 YNTLMVYLCKNGRSMEARKVFDSMVKK 305



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 90/420 (21%), Positives = 158/420 (37%), Gaps = 120/420 (28%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
            Q+G + N  TY T++D L R  K +   +   ++  E    +  +F  L+     C   
Sbjct: 373 RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKW 432

Query: 147 ERVLEMFHKIHPITREK-PSLKAISTCLNLLIESNQVDLAQNF-------------LKYS 192
           ++  E+   +  I R   P+    +T LN L +   V  A+N              + Y+
Sbjct: 433 DKAEEL--AVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYT 490

Query: 193 ------------NQHLRL---------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                       ++  +L         KPN   +N +I  +CK G +E A  + ++M   
Sbjct: 491 TLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASK 550

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP------------------D 273
            ++ P ++ YST++ GL +  R   A EL+  M+     LP                  D
Sbjct: 551 GVN-PGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDD 609

Query: 274 AL----------------TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           AL                T+N++ID   +GG+ D AK +   +   G  PNV  Y  +M 
Sbjct: 610 ALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMK 669

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              ++G L+E  ++                                      +++ GC A
Sbjct: 670 SLIEQGLLEELDDL-----------------------------------FLSLEKNGCTA 694

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D    N ++G L ++G++ +A          G+YL+K       NFS +    E  + L+
Sbjct: 695 DSRMLNALVGKLPQKGEVRKA----------GVYLSKIDEN---NFSLEASTAESLVFLV 741


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 178/317 (56%), Gaps = 3/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+PN   +N+LI   CK G+++ A  VLK+M +  ++ P+++TY+TLI GL       EA
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVA-PDVVTYNTLIKGLSDVLEMDEA 309

Query: 258 IELFEEMV-SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           + L EEMV  K+ + P+ +T+N +I G C  G++ +A ++   M+  GC  N+  Y  L+
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            G  +  K+++A E+ DEM +  L+PD+  Y+ LI  FC+  +VD A +LL  M++RG +
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            ++  +  +L  +C +G +E A  +  ++  +   L+  +Y  +++ +C+ G+L+ A EL
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L+ ++  G  P   T + ++    K+G  E A   L  +   GF P+   +  L++    
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 497 GRKLLFAFELLDELVIK 513
             ++    EL+ E++ K
Sbjct: 549 KGEINKVLELIREMITK 565



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 176/338 (52%), Gaps = 22/338 (6%)

Query: 193 NQHLRLKP---------------NTCIFNILIKHHCKRGTLESAFEVLKEM--KKSQMSY 235
           N+HLRL P               +   +N ++   C+RG  + A  +L+ M  +      
Sbjct: 53  NRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACR 112

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN ++Y+ L+  LC +    +A+ L   M S   +  D +TY  LI G C   +VD+A +
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAG-VRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +M  M  +G  PNV  Y++L+ G+CK G+ ++  +VF EM    ++PD + YT LI+  C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+  +A  ++  M  RG + ++VT+N+++  +C+EG ++EA+G+L+K+   G+  +  
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRG---FLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +Y  ++       E+++A+ LL  M+ RG     P+  T N ++  LC  G    A    
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             + E G      ++ LL+  + R  K+  A EL+DE+
Sbjct: 351 AMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 182/377 (48%), Gaps = 55/377 (14%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           ++F  +SE KG   +   Y  ++D L +  K +    V+  M         G+  N++ +
Sbjct: 206 KVFVEMSE-KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV------RRGLEPNVVTY 258

Query: 140 --FSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
               NC   E  ++    +     EK   P +   +T +  L +  ++D A   L+   +
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE---E 315

Query: 195 HLR----LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            +R    +KPN   FN +I+  C  G +  AF+V + M +      NL+TY+ LI GL +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP--- 307
             + R+A+EL +EM S   + PD+ TY++LI GFC+  +VDRA+ ++  M++ G  P   
Sbjct: 375 VHKVRKAMELMDEMTSLG-LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 308 -------------------NVFN------------YTTLMNGFCKEGKLQEAKEVFDEMK 336
                              N+FN            Y+T+++G CK G L+ AKE+   + 
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +  L PD + Y+ +IN F ++G ++ A  +LK+M   G   D+  F+ ++ G   +G+I 
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEIN 553

Query: 397 EALGMLEKLWYDGIYLN 413
           + L ++ ++    I L+
Sbjct: 554 KVLELIREMITKNIALD 570



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 136/259 (52%), Gaps = 7/259 (2%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK---NNGCNPNVFNY 312
           EA  L + + S    + DA++YN ++   CR G  DRA  ++  M    +  C PN  +Y
Sbjct: 63  EATSLLDALPS----VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T LM   C +    +A  +   M++  ++ D + Y TLI   C A  VD+A+EL+ EM E
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + ++V ++ +L G C+ G+ E+   +  ++   GI  +   Y  +++  C+ G+ +K
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKK 238

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  ++ +M+ RG  P+  T N L+  +CK G  ++A   L  + E G  P+  ++  L++
Sbjct: 239 AHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIK 298

Query: 493 LICRGRKLLFAFELLDELV 511
            +    ++  A  LL+E+V
Sbjct: 299 GLSDVLEMDEAMWLLEEMV 317


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 261/541 (48%), Gaps = 52/541 (9%)

Query: 12  CRFSSFSTSSSSL-----------PWISPLEVIKANTPKADPPVETSDTCVDARKRSRFI 60
           C F  + T+SS+L           P +   ++++ N  K    V      +   KR   I
Sbjct: 25  CLFRVYRTASSALLLDDDHVFDTSPGVPVDDLVEINIQKCQLRVGRKRNEIRVMKRRSRI 84

Query: 61  SHGAAISLIKCEKEPQCALEI-----FNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
                +S +  +       E+     F+T  ++ GF+ +   + T+++ LA       V 
Sbjct: 85  HRKHVLSPVVVKVFKSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVY 144

Query: 116 AVLRQMTYETCKFHEG-----------------------IFLNLMKHFSNCSLHERVLEM 152
           A+LR +    C +++                        +F  L+K F+  S+ E  +++
Sbjct: 145 ALLRDIV---CYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDV 201

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
           F +      E  S ++ +  L  L E+N+ +  ++  +   +     PN   + I++  +
Sbjct: 202 FLQAKKTGLEL-STRSCNFLLKCLAEANRREFLRSLFE-EMKSTGPPPNVFTYTIMMNFY 259

Query: 213 CKRGTLES------AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           CK    E+      A E+L+EM+++  S P ++TYST I GLC+ G    A++    ++S
Sbjct: 260 CKGNFGEADIDTRQATEILEEMERNGES-PTVVTYSTYIYGLCRVGYVESALDFVRSLIS 318

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            + ++ +   YN +I G C+ G++D A K++E MK+ G +P+V+ Y+ L++GFCK+G ++
Sbjct: 319 ANGLV-NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVE 377

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +   + +EMK   ++P  + Y++L +  C+    D +L++ +++   G K D   ++I++
Sbjct: 378 KGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILI 437

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C +G ++ A  ++E++  + +  + +++  +++  C+ G    A+E   +ML  G L
Sbjct: 438 KGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGIL 497

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P  AT N ++   C+ G  E+A   +  +   G  P   ++  ++  +C+ RK   A EL
Sbjct: 498 PSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALEL 557

Query: 507 L 507
            
Sbjct: 558 F 558



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 187/356 (52%), Gaps = 5/356 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +PSL + S+  + L +    D++ +  +        K +   ++ILIK  C +G L+SA 
Sbjct: 392 EPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAA-GYKYDQTAYSILIKGFCMQGDLDSAH 450

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++++EM ++ ++ P+   + +L+ G CK G +  A+E F  M+ +  ILP   T NV+ID
Sbjct: 451 KLMEEMVRNNLA-PDPSNFESLVHGFCKMGLWVNALEFFNMML-EGGILPSIATCNVIID 508

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             CR G+V+ A  +M  M+  G  PN+F Y  ++N  CKE K + A E+F  M    + P
Sbjct: 509 AHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLP 568

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
             + Y+TLI+ F +     +AL L   M + G   D+V + I++  LC   ++ EA  + 
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
           +K+  +G+  +K SY  V+   C+ G++ KA  L   ML RG LP   T   L+   CK 
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKM 688

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
              + A + +  +   G  P+  ++ +L+    R   L  A E+L+E+  KE+G +
Sbjct: 689 NRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEM--KENGVL 742



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 149/296 (50%), Gaps = 9/296 (3%)

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           F +L E  K      ++I +  LI     N     A+++F +   K  +     + N L+
Sbjct: 165 FPILLESPKDAAR--SVIVFDLLIKVFAANSMLENAVDVFLQ-AKKTGLELSTRSCNFLL 221

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK------EGKLQEAKEVFDEM 335
                  + +  + + E MK+ G  PNVF YT +MN +CK      +   ++A E+ +EM
Sbjct: 222 KCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEM 281

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +     P  + Y+T I   CR G V+ AL+ ++ +       ++  +N I+ GLC++G++
Sbjct: 282 ERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGEL 341

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           +EAL +LE++   GI  +  +Y I+++  C++G++EK + L+  M      P   + + L
Sbjct: 342 DEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSL 401

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              LCK  +++ +      L   G+K +  ++++L++  C    L  A +L++E+V
Sbjct: 402 FHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 150/259 (57%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +   A
Sbjct: 154 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDGA 212

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 213 NGLFDEMLVKG-LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 271

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A ++ DEM    LKPD   YTTLI+  C+ G +D A E  K M +   + 
Sbjct: 272 GLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 331

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 332 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLL 391

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 392 KEMQRDGHAPSVVTYNVLM 410



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 176

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+  A  +FDEM    L P+ + +TTLI+
Sbjct: 177 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLID 236

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 237 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 296

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 297 DKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 356

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP++ ++ ++V   C+   +    +LL E+
Sbjct: 357 REMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEM 394



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 151/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 155 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 212

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 213 NGLFDEMLVKGL-VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLI 270

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+ F YTTL++G CKEG L  A E    M    ++
Sbjct: 271 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 330

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 331 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKL 390

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 391 LKEMQRDGHAPSVVTYNVLMN 411



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 190 QPDVYTYSVLINGLCKESKMDGANGLF---DEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 246

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GLCK G  ++A +L +EM S   + PD  TY  L
Sbjct: 247 AMEIYKQML-SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMKGLKPDKFTYTTL 304

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 305 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 364

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPDT  YT ++N FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 365 KPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 52/318 (16%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDALTY 277
           +Y T+I  LC +    EA  L E +VS+                      D  +   L  
Sbjct: 2   SYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLIT 61

Query: 278 NVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NGCNP 307
             L  GF R                  D  +K++E +                   G   
Sbjct: 62  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M   G + D+ T+++++ GLC+E K++ A G+ +++   G+  N  ++  +++  C+ 
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G ++ A+E+ + ML +  LP   T N L+  LCK G  + A   +  +   G KP+  ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTY 301

Query: 488 ALLVELICRGRKLLFAFE 505
             L++  C+   L  AFE
Sbjct: 302 TTLIDGCCKEGDLDTAFE 319



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E   +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 32  KGSASAVFAAVLETXGNQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD 89

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 90  TCRKVLEHLMKLKYFKLVWGF--------YEEILEC----GYPASLYFFNILMHRFCKDG 137

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 138 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 197

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K++ A G+ +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 198 VLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 257

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G                                    L  A
Sbjct: 258 SLLPDLITYNTLIYGLCKKG-----------------------------------DLKQA 282

Query: 504 FELLDELVIK 513
            +L+DE+ +K
Sbjct: 283 HDLIDEMSMK 292


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 208/436 (47%), Gaps = 44/436 (10%)

Query: 78  ALEIFN-TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL 136
           AL +F+ T+ E  GF  +  TY T+++ L +     A   +LR M  + C+         
Sbjct: 239 ALHLFDKTIGE--GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCR--------- 287

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
                                      P++ A +T ++ L +  QV  A N   +S    
Sbjct: 288 ---------------------------PNVIAYNTIIDSLCKDRQVTEAFNL--FSEMIT 318

Query: 197 R-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+   +N LI   C     +    +L EM  S++  PN++ +ST++D LCK G   
Sbjct: 319 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI-MPNVVVFSTVVDALCKEGMIA 377

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A ++ + M+ K  + PD +TY  L+DG C   ++D A K+ + M + GC PNV +Y  L
Sbjct: 378 IAHDVVDMMI-KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 436

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+C+  ++ +A  + ++M    L  DT+ Y TLI+  C  GR+  A+ L  EM   G 
Sbjct: 437 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 496

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VT+ I+L  LC+   + EA+ +L+ +    +  +   Y I ++  C+ GELE A +
Sbjct: 497 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD 556

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   +  +G  P   T N ++  LCK G+ ++A      + E G   +   +  ++    
Sbjct: 557 LFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFL 616

Query: 496 RGRKLLFAFELLDELV 511
           R  +   A +LL E++
Sbjct: 617 RSNETFGATQLLQEML 632



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 147/297 (49%), Gaps = 2/297 (0%)

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
           TL+ A      M       P+ + ++ L+  + K   +   + L  +M S   I PD  T
Sbjct: 130 TLDDALSSFNRMLHMH-PPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFG-IPPDVYT 187

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
            N+LI+ FC   ++  A  ++  +   GC P+   + TL+ G C EGK+ EA  +FD+  
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
               +PD + Y TL+N  C+ G    A+ LL+ M ++ C+ +++ +N I+  LC++ ++ 
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 307

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  +  ++   GI  +  +Y  +++  C   E +    LL  M+    +P+    + ++
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             LCK GM   A   +  +++ G +P+  ++  L++  C   ++  A ++ D +V K
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 424


>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g61520, mitochondrial; Flags: Precursor
 gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
 gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 180/355 (50%), Gaps = 11/355 (3%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQ-NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           E P   A+ +CL        +D+++ N L      ++++P+     ILI   CK   ++ 
Sbjct: 293 EAPPFNALLSCL-----GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE 347

Query: 221 AFEVLKEMKKSQMSYPNLIT-----YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           A EV ++M+  +    N+I      ++TLIDGLCK GR +EA EL   M  +++  P+A+
Sbjct: 348 ALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAV 407

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYN LIDG+CR GK++ AK+++  MK +   PNV    T++ G C+   L  A   F +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           +   +K + + Y TLI+  C    V++A+   ++M E GC  D   +  ++ GLC+  + 
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            +A+ ++EKL   G  L+  +Y +++   C K   EK  E+L  M   G  P   T N L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL 587

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +    K    E     +  + E G  P   ++  +++  C   +L  A +L  ++
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N+LI   C +   E  +E+L +M+K +   P+ ITY+TLI    K+  F E++E   E 
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEK-EGKKPDSITYNTLISFFGKHKDF-ESVERMMEQ 606

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK-NNGCNPNVFNYTTLMNGFCKEG 323
           + +D + P   TY  +ID +C  G++D A K+ + M  ++  NPN   Y  L+N F K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
              +A  + +EMK  +++P+   Y  L  C     + +  L+L+ EM E+ C+ + +T  
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726

Query: 384 IIL 386
           I++
Sbjct: 727 ILM 729



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 131/255 (51%), Gaps = 12/255 (4%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+  I+  LI   C+      A  V++++K+   S  +L+ Y+ LI   C      +  E
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL-DLLAYNMLIGLFCDKNNTEKVYE 567

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +  +M  K+   PD++TYN LI  F +    +  +++ME M+ +G +P V  Y  +++ +
Sbjct: 568 MLTDM-EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626

Query: 320 CKEGKLQEAKEVFDEMK-NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           C  G+L EA ++F +M  +  + P+T+ Y  LIN F + G   +AL L +EMK +  + +
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + T+N +   L  + + E  L +++++       N+ +  I++        L  + EL++
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME------RLSGSDELVK 740

Query: 439 LMLCRGFLPHYATSN 453
           L   R F+  Y+ ++
Sbjct: 741 L---RKFMQGYSVAS 752



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 147/312 (47%), Gaps = 21/312 (6%)

Query: 206 NILIKHHCKRGTLESAFEVLKE----MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           N+LI+   + G +  +  V +     MK SQ+        + ++D L +NG   +A ++ 
Sbjct: 156 NLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR-------NVVVDVLLRNGLVDDAFKVL 208

Query: 262 EEMVSKDQILP-DALTYNVLIDGFCRGGKVDRAKKI--MEFMKNNGCNPNVFNYTTLMNG 318
           +EM+ K+ + P + +T ++++    +G  +   K I  +    ++G +PN    T  ++ 
Sbjct: 209 DEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISS 268

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK  +   A ++  ++       +   +  L++C  R   +    +L+ +M E   + D
Sbjct: 269 LCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPD 328

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKL----WYDG--IYLNKASYRIVLNFSCQKGELEK 432
           +VT  I++  LC+  +++EAL + EK+      DG  I  +   +  +++  C+ G L++
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388

Query: 433 AIELL-RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           A ELL R+ L     P+  T N L+   C+AG  E A   +  + E   KP   +   +V
Sbjct: 389 AEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448

Query: 492 ELICRGRKLLFA 503
             +CR   L  A
Sbjct: 449 GGMCRHHGLNMA 460



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 4/173 (2%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KP++  +N LI    K    ES   ++++M++  +  P + TY  +ID  C  G   EA+
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD-PTVTTYGAVIDAYCSVGELDEAL 636

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF++M    ++ P+ + YN+LI+ F + G   +A  + E MK     PNV  Y  L   
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
             ++ + +   ++ DEM     +P+ I    L+    R    DE ++L K M+
Sbjct: 697 LNEKTQGETLLKLMDEMVEQSCEPNQITMEILME---RLSGSDELVKLRKFMQ 746



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 38/215 (17%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           T  E++G   ++ TY T++    ++K FE+V+ ++ QM        +G+           
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR------EDGL----------- 612

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
                               P++      ++      ++D A    K    H ++ PNT 
Sbjct: 613 -------------------DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           I+NILI    K G    A   LKE  K +M  PN+ TY+ L   L +  +    ++L +E
Sbjct: 654 IYNILINAFSKLGNFGQALS-LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           MV +    P+ +T  +L++      ++ + +K M+
Sbjct: 713 MVEQ-SCEPNQITMEILMERLSGSDELVKLRKFMQ 746


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 195/394 (49%), Gaps = 39/394 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F  + E +G   ++ TY+ +LD L+R  + + VD VL  M         G  + + 
Sbjct: 241 AFQVFKGMLE-RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQ----AMKAGCVMEVY 295

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
            H                              +  +  L  S +  LA+N L    +   
Sbjct: 296 TH------------------------------NAFIGALCRSGKFPLAKNILLGMIESGS 325

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N +I   CK G ++ A+++ ++M  S    P++I ++TLI G CK GR  +A
Sbjct: 326 L-PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 384

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L  EM +K+  +PD +TYN LIDG  + G + +AK +++ M+  GC PNV  Y  L+N
Sbjct: 385 HQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALIN 444

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG--C 375
           G+ K G  +EA+ +FDEM      PD I Y T+++ F +AG + +A  + +++K +   C
Sbjct: 445 GYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYC 504

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL-EKAI 434
             D +T+ I++ G CR    E+ L +L+++   G   +  +Y +++    +  E+  KA+
Sbjct: 505 SPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKAL 564

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            + + ML +  +P  +  N L+    + G    A
Sbjct: 565 AVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSA 598



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 208/432 (48%), Gaps = 8/432 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + GF  N+ TY+T++    R ++ +    ++R+M       +  ++++ +  F       
Sbjct: 108 RNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQS 167

Query: 148 RVLEMFHKIHPITREK-PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              E       I   + P +   +T ++ L ++ ++D     L+  ++   + P+   F 
Sbjct: 168 SRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG-GIPPDVVTFC 226

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            +I   CK   ++ AF+V K M + +   P+ +TYS ++D L +  R     E+ E M +
Sbjct: 227 SIISGLCKANRIDDAFQVFKGMLE-RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQA 285

Query: 267 -KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K   + +  T+N  I   CR GK   AK I+  M  +G  PN+ +Y  +++G CK G +
Sbjct: 286 MKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNV 345

Query: 326 QEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG-CKADIVTFN 383
            +A ++  +M  +   KPD I + TLI+ FC+AGR+ +A +LL EMK +  C  D+VT+N
Sbjct: 346 DDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYN 405

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G  + G +++A  +L+++   G   N  +Y  ++N   + G  E+A  L   M  +
Sbjct: 406 TLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAK 465

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF--KPESDSWALLVELICRGRKLL 501
           G  P   T N +L    KAGM   A      L        P++ ++ +L++  CR     
Sbjct: 466 GCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTE 525

Query: 502 FAFELLDELVIK 513
               LL E+  +
Sbjct: 526 QGLTLLQEMTAR 537



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 167/341 (48%), Gaps = 41/341 (12%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI   CK G L++A  +L++M  +  + PN++TY+ LIDGLCK  R  +AI+  + M
Sbjct: 13  YTTLIDGLCKSGDLDAAQALLQKMADAGCA-PNVVTYTALIDGLCKARRPHDAIQTVKRM 71

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + +    PD +TYN LI G C   ++D A  +++ +  NG  PN   Y+TL+   C+  +
Sbjct: 72  L-RSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRR 130

Query: 325 LQEAKEVF-------------------------------------DEMKNFLLKPDTIGY 347
           L +A+ +                                      DEM      PD + Y
Sbjct: 131 LDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTY 190

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            T I+  C+AG++D+ LE+L+EM   G   D+VTF  I+ GLC+  +I++A  + + +  
Sbjct: 191 NTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLE 250

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLM--LCRGFLPHYATSNELLVRLCKAGMA 465
            G   +  +Y I+L+   +   L+   E+L  M  +  G +    T N  +  LC++G  
Sbjct: 251 RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKF 310

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
             A   L G++E G  P   S+  +++ +C+   +  A++L
Sbjct: 311 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKL 351



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 187/389 (48%), Gaps = 43/389 (11%)

Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
           S+   +T ++ L +S  +D AQ  L+         PN   +  LI   CK      A + 
Sbjct: 9   SVVTYTTLIDGLCKSGDLDAAQALLQ-KMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 67

Query: 225 LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
           +K M +S    P+L+TY++LI GLC   R  +A  + +E+V ++   P+ +TY+ L+   
Sbjct: 68  VKRMLRSGCE-PDLVTYNSLIHGLCMANRMDDAGLVLQELV-RNGFAPNHITYSTLVIWN 125

Query: 285 CRGGKVDRAKKIMEFM--KNNGCN-----------------------------------P 307
           CR  ++D+A+ ++  M  + + CN                                   P
Sbjct: 126 CRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIP 185

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +V  Y T ++G CK GKL +  E+ +EM    + PD + + ++I+  C+A R+D+A ++ 
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY--DGIYLNKASYRIVLNFSC 425
           K M ERGC  D +T++I+L  L R  +++    +LE +     G  +   ++   +   C
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALC 305

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPES 484
           + G+   A  +L  M+  G LP+  + N ++  LCK+G  +DA      +++ G  KP+ 
Sbjct: 306 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 365

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIK 513
             +  L+   C+  +L  A +LL E+  K
Sbjct: 366 IFFNTLISGFCKAGRLSQAHQLLIEMKAK 394



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 153/286 (53%), Gaps = 7/286 (2%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           +++TY+TLIDGLCK+G    A  L ++M       P+ +TY  LIDG C+  +   A + 
Sbjct: 9   SVVTYTTLIDGLCKSGDLDAAQALLQKMADAG-CAPNVVTYTALIDGLCKARRPHDAIQT 67

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           ++ M  +GC P++  Y +L++G C   ++ +A  V  E+      P+ I Y+TL+   CR
Sbjct: 68  VKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCR 127

Query: 357 AGRVDEALELLKEMKERGCKADIVTF-NIILG---GLCREGKIEEALGMLEKLWYDGIYL 412
             R+D+A  L++EM  RG   ++V + + I G     C+  + E   G  +++   G   
Sbjct: 128 RRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDG--DEMIESGRIP 185

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y   ++  C+ G+L+K +E+L  M   G  P   T   ++  LCKA   +DA    
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
            G++E G  P+S +++++++ + R  +L    E+L+ +   ++G +
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCV 291



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 117/213 (54%), Gaps = 2/213 (0%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M  NG + +V  YTTL++G CK G L  A+ +  +M +    P+ + YT LI+  C+A R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             +A++ +K M   GC+ D+VT+N ++ GLC   ++++A  +L++L  +G   N  +Y  
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG--LVE 477
           ++ ++C++  L++A  L+R M+ RG + +     + +   C+A           G  ++E
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G  P+  ++   +  +C+  KL    E+L+E+
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 213



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M   G  A +VT+  ++ GLC+ G ++ A  +L+K+   G   N  +Y  +++  C+   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
              AI+ ++ ML  G  P   T N L+  LC A   +DA + L  LV  GF P   +++ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 490 LVELICRGRKLLFAFELLDELVIKES 515
           LV   CR R+L  A  L+ E++++ S
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGS 146


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  + +  P++ TYS LI+GLCK  +  +A
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQ-PDVYTYSVLINGLCKESKMDDA 213

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 214 NELFDEMLVKG-LIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIY 272

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G L++A ++ DEM    LKPD   YTTLI+  C+ G +D A +  K M +   + 
Sbjct: 273 GLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRL 332

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 333 DDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLL 392

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G  P   T N L+
Sbjct: 393 KEMQRNGHAPSVVTYNVLM 411



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 177

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  NG  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 178 GFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 237

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K M  +    D++T+N ++ GLC+ G +++A  +++++   G+  
Sbjct: 238 GHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKP 297

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A +  + M+             L+  LC+ G + DA   L
Sbjct: 298 DKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKML 357

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP+  ++ +++   C+   +    +LL E+
Sbjct: 358 REMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEM 395



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 152/261 (58%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 156 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDA 213

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E+++ M+S+  +LPD +TYN LI
Sbjct: 214 NELFDEMLVKGL-IPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQ-SLLPDLITYNTLI 271

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+ F YTTL++G CKEG L  A +    M    ++
Sbjct: 272 YGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIR 331

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ G+  +A ++L+EM   G K DI T+ +I+   C++G + +   +
Sbjct: 332 LDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL 391

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  +G   +  +Y +++N
Sbjct: 392 LKEMQRNGHAPSVVTYNVLMN 412



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLIPNGVTFTTLIDGHCKNGRVDL 247

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K M  SQ   P+LITY+TLI GLCKNG  ++A +L +EM S   + PD  TY  L
Sbjct: 248 AMEIYKRML-SQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEM-SMKGLKPDKFTYTTL 305

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A K  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 306 IDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGL 365

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 366 KPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 144/320 (45%), Gaps = 52/320 (16%)

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDAL 275
           L +Y T+I  LC +    EA  L + +VS+                      D  +   L
Sbjct: 1   LHSYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGL 60

Query: 276 TYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NGC 305
               L  GF R                  D  +K++E +                   G 
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGY 120

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
             +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  C
Sbjct: 181 LKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHC 240

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
           + G ++ A+E+ + ML +  LP   T N L+  LCK G  + A   +  +   G KP+  
Sbjct: 241 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKF 300

Query: 486 SWALLVELICRGRKLLFAFE 505
           ++  L++  C+   L  AF+
Sbjct: 301 TYTTLIDGCCKEGDLDTAFK 320



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+    F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 33  KGSASVVFATILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD 90

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 91  TCRKMLEHLMKLRYFKLVWGF--------YEEILEC----GYPASLYFFNILMHRFCKDG 138

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G +DE   L   M   G + D+ T++
Sbjct: 139 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYS 198

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 199 VLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQ 258

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  LCK G                                    L  A
Sbjct: 259 SLLPDLITYNTLIYGLCKNG-----------------------------------DLKQA 283

Query: 504 FELLDELVIK 513
            +L+DE+ +K
Sbjct: 284 HDLIDEMSMK 293


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 192/400 (48%), Gaps = 15/400 (3%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E+F+ V+E  Q+G   N  TY TI+D   + ++     A+L +M    C  +   F  L+
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSN 193
           K F         L M+H +     E  +   IS   N+LI        +  A +F   S 
Sbjct: 300 KGFFEDGKVHDALSMWHWM---VDEGWAPSTIS--YNVLIRGLCCIGDLKGALDFFN-SM 353

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   L PN   ++ L+      G L+ A  +  EMK S    PN++ Y+ +ID LCK   
Sbjct: 354 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCK-PNVVVYTNMIDVLCKKMM 412

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F +A  L ++M+  D   P+ +T+N LI   C  G+V RA  +   M+ NGC+PN   Y 
Sbjct: 413 FDQAESLIDKML-MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 471

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++G  +EG  ++A  +  EM N   +   + Y T+INC C+      A+ LL  M  +
Sbjct: 472 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ 531

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G + D  TFN I+   C+EGK+  A  +L ++       N  +Y I+++  C +G+L  A
Sbjct: 532 GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNA 591

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
           +  L  ML  G  P+ AT N +LVR     +     I LF
Sbjct: 592 MVYLLKMLYEGICPNEATWN-VLVRAIFTNIGTIGPIHLF 630



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 209/440 (47%), Gaps = 17/440 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
            +KG + +  ++ TI+  + +  + E     L + T      +  +   L   F      
Sbjct: 184 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAE-TVPVQASYNAVVHALCGEF------ 236

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            R+ E+F  ++ + +   +P++   +T ++   ++ ++ +A   L      +   PN   
Sbjct: 237 -RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM-VSMGCTPNVLT 294

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F  L+K   + G +  A  +   M     + P+ I+Y+ LI GLC  G  + A++ F  M
Sbjct: 295 FTALVKGFFEDGKVHDALSMWHWMVDEGWA-PSTISYNVLIRGLCCIGDLKGALDFFNSM 353

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             ++ +LP+A TY+ L+DGF   G +D A  I   MK++GC PNV  YT +++  CK+  
Sbjct: 354 -KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMM 412

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             +A+ + D+M      P+T+ + TLI   C  GRV  AL +   M+  GC  +  T+N 
Sbjct: 413 FDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNE 472

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L GL REG  ++A  M+ ++  +G  L+  +Y  V+N  CQ    + A+ LL  M+ +G
Sbjct: 473 LLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQG 532

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL---- 500
             P   T N ++   CK G    AA  L  +  +       ++ +L+  +C   KL    
Sbjct: 533 IQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAM 592

Query: 501 LFAFELLDELVIKESGTIQV 520
           ++  ++L E +     T  V
Sbjct: 593 VYLLKMLYEGICPNEATWNV 612



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 168 AISTCLNLLIESNQVDLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           A+   +     +   D A + F + S+   R  P   ++N L+    +   + +   V  
Sbjct: 88  ALVAAIGAFARAGSADRALKTFYRASDLGCR-DPGVRVYNHLLDALLRENMVGAVVPVYD 146

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
            M+K+ +  PN+ TY+ LI  LC+N R   A ++ +EM S+    PD +++  ++ G C+
Sbjct: 147 NMRKAGVD-PNVYTYNLLIRALCQNDRVDAARKMLDEM-SRKGCHPDEVSHGTIVSGMCK 204

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G+V+ A+  +         P   +Y  +++  C E ++ E   V +EM    L+P+ + 
Sbjct: 205 LGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVT 259

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           YTT+++ FC+A  +  A  +L  M   GC  +++TF  ++ G   +GK+ +AL M   + 
Sbjct: 260 YTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMV 319

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
            +G   +  SY +++   C  G+L+ A++    M     LP+  T + L+     AG  +
Sbjct: 320 DEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLD 379

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF--AFELLDELVI 512
            A +    +   G KP    +  +++++C  +K++F  A  L+D++++
Sbjct: 380 GAMLIWNEMKSSGCKPNVVVYTNMIDVLC--KKMMFDQAESLIDKMLM 425


>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 712

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 219/485 (45%), Gaps = 52/485 (10%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    +  ++  K P   L  F+ V   KGF+H   ++  +L+ L R +   A    L 
Sbjct: 69  LSRTTVLQTLRLIKVPADGLRFFDWVY-NKGFSHKEQSFFLMLEFLGRARNLNAARNFLF 127

Query: 120 QMTYET---CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
            +   +    K  +  F +L++ + N  L +  + +F  +  +    PS+   ++ L++L
Sbjct: 128 SIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGIS-PSVLTFNSLLSIL 186

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           ++  +  +A +      +   + P++  FN LI   CK   ++ AF + KEM+    + P
Sbjct: 187 LKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCN-P 245

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK-DQILPDALTYNVLIDGFCRGGKVDRAKK 295
           +++TY+T+IDGLC+ G+ + A  L   M+ K   + P+ ++Y  L+ G+C   ++D A  
Sbjct: 246 DVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALL 305

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGF------------------------------------ 319
           +   M   G  PN   Y TL+ G                                     
Sbjct: 306 VFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAH 365

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER------ 373
           C  G L  A +VF EM N  L PD+  Y+ LI   C     D+A  L  E+ E+      
Sbjct: 366 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGK 425

Query: 374 -GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
             CK     +N++   LC  GK ++A  +  +L   G   + +SYR ++   C++G+ + 
Sbjct: 426 NECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKA 484

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW-ALLV 491
           A ELL LML R F+P   T   L+  L K G A  A   L  ++   + P + ++ ++L 
Sbjct: 485 AYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLA 544

Query: 492 ELICR 496
           EL+ R
Sbjct: 545 ELVKR 549



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 190/391 (48%), Gaps = 53/391 (13%)

Query: 173 LNLLIESNQVDLAQNFL----KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           L  L  +  ++ A+NFL    K SN  ++L+     FN LI+ +   G  + +  + + M
Sbjct: 110 LEFLGRARNLNAARNFLFSIEKRSNGCVKLQDR--YFNSLIRSYGNAGLFQESVNLFQTM 167

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           KK  +S P+++T+++L+  L K GR   A ++F+EM     + PD+ T+N LI GFC+  
Sbjct: 168 KKMGIS-PSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNS 226

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIG 346
            VD+A  I + M+   CNP+V  Y T+++G C+ GK++ A  + + M  K   + P+ + 
Sbjct: 227 MVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVS 286

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL----------------- 389
           YTTL+  +C    +DEAL +  EM  RG K + VT+N ++ GL                 
Sbjct: 287 YTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGD 346

Query: 390 -------------------CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
                              C  G ++ A+ + +++    ++ + ASY +++   C + E 
Sbjct: 347 AFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEF 406

Query: 431 EKAIELLRLMLCRGFL-------PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           +KA  L   +  +  L       P  A  N +   LC  G A+ A      L++ G +  
Sbjct: 407 DKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDP 466

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKE 514
           S S+  L+  +CR  K   A+ELL  ++ +E
Sbjct: 467 S-SYRTLITGLCREGKFKAAYELLVLMLRRE 496



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 208/434 (47%), Gaps = 26/434 (5%)

Query: 92  NHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCSLHERV 149
           N +  TY TI+D L R  K +    +L  M  +    H  I  +  L++ +      +  
Sbjct: 244 NPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEA 303

Query: 150 LEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           L +FH++  +TR  KP+    +T +  L E+++ D  + FL   +      P+ C FNIL
Sbjct: 304 LLVFHEM--LTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNIL 361

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           IK HC  G L++A +V +EM   ++ +P+  +YS LI  LC    F +A  LF E+  K+
Sbjct: 362 IKAHCDAGHLDAAMKVFQEMLNMKL-HPDSASYSVLIRTLCLRNEFDKAETLFNELFEKE 420

Query: 269 QIL------PDALTYNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCK 321
            +L      P A  YN++ +  C  GK  +A+K+  + MK    +P+  +Y TL+ G C+
Sbjct: 421 VLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPS--SYRTLITGLCR 478

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           EGK + A E+   M      PD   Y  LI+   + G    A + L+ M          T
Sbjct: 479 EGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 538

Query: 382 FNIILGGLCREGKIEEALG----MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           F+ +L  L +     ++ G    MLEK     I L+  + R+V + S QK   EKA  ++
Sbjct: 539 FHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFS-SAQK---EKAFLIV 594

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           RL+   G+L       ELL  LC+     DA   +   +E     + D+   ++E +C+ 
Sbjct: 595 RLLYDNGYL---IKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKH 651

Query: 498 RKLLFAFELLDELV 511
           ++   AF L +ELV
Sbjct: 652 KRHSEAFSLYNELV 665


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 151/259 (58%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L+  F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LI G C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+G L++A  + DEM    LKPD   YTTLI+  C+ G +D A +  K M +   + 
Sbjct: 291 GLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRNGHVPSVVTYNVLM 429



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G +D 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLDE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI 
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIX 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K M  +    D++T+N ++ GLC++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A +  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP+  ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 151/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLI G CKNGR   A+E+++ M+S+  +LPD +TYN LI
Sbjct: 232 NELFDEMLVKGL-IPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQ-SLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C+ G + +A  +++ M   G  P+ F YTTL++G CKEG L  A +    M    ++
Sbjct: 290 YGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K DI T+ +I+   C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  +G   +  +Y +++N
Sbjct: 410 LKEMQRNGHVPSVVTYNVLMN 430



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLIPNGVTFTTLIXGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K M  SQ   P+LITY+TLI GLCK G  ++A  L +EM S   + PD  TY  L
Sbjct: 266 AMEIYKXML-SQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEM-SMKGLKPDKFTYTTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A K  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 18  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIMEFMKN----------------NG 304
           L    L  GF R                  D  +K++E +                   G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G +DE  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  ++   
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +  LP   T N L+  LCK G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AF+
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFK 338



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/299 (20%), Positives = 127/299 (42%), Gaps = 38/299 (12%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
           +G+  + F  + E K +Q S  ++  +S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFATILETKGTQRS--DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVP-- 106

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
                           D  +K++E +           Y  L+ GF            ++E
Sbjct: 107 ---------------FDTCRKVLEHLMK-------LRYFKLVWGF------------YEE 132

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           +           +  L++ FC+ G +  A  +   + + G +  +V++N ++ G  R G 
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++E   +   +   G+  +  +Y +++N  C++ +++ A EL   ML +G +P+  T   
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 252

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L+   CK G  + A      ++     P+  ++  L+  +C+   L  A  L+DE+ +K
Sbjct: 253 LIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMK 311


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 216/418 (51%), Gaps = 22/418 (5%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           T+A +L  L R  + E    +L +M    C   + I+  L+  +S      +  +   ++
Sbjct: 12  TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71

Query: 157 ---HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIK 210
              H +    P++   +  ++ L ++ +   A   L      +R K   PN   +N++++
Sbjct: 72  VKNHCL----PTVVTYTNIVDGLCKAGRTKDAVKLL----DEMRDKGCSPNIYTYNVIVE 123

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
             C+   L+ A ++L+EM   +  +P+++TY++ I GLCK  R  EA +    M     +
Sbjct: 124 GLCEERKLDEAKKMLEEMA-VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM----PV 178

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PD ++Y  +I+G C+ G +D A ++++ M N GC P+V  Y++L++GFCK G+++ A  
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + D M     +P+ + Y +L+    R G + +A ++L EM+ RG   D+V++N  + GLC
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           +  ++++A  + +++   G   N +SY +++   C+K EL+ AI L+     +  +    
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLV--EMGFKPESDSWALLVELICRGRKLLFAFEL 506
               LL  LCK G   D A ALF  V  E   +P+   + ++++  C+ R++  A ++
Sbjct: 359 LYTVLLDGLCKGGRF-DEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 415



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 169/341 (49%), Gaps = 68/341 (19%)

Query: 236 PNLITYSTLIDGLCKN----------GRFRE-------------------------AIEL 260
           P+  T++ L+ GLC++          GR +E                         A + 
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             EMV K+  LP  +TY  ++DG C+ G+   A K+++ M++ GC+PN++ Y  ++ G C
Sbjct: 68  LAEMV-KNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 321 KEGKLQEAKEVFDEM----------------------------KNFLLK----PDTIGYT 348
           +E KL EAK++ +EM                            + FL +    PD + YT
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYT 186

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           T+IN  C++G +D A  +L +M  RGC  D+VT++ ++ G C+ G++E A+G+L+ +   
Sbjct: 187 TVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 246

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G   N  +Y  +L    + G + KA ++L  M  RGF P   + N  +  LCKA   + A
Sbjct: 247 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKA 306

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
                 +VE G  P + S+++LVE +C+ ++L  A  L+++
Sbjct: 307 KAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 220/464 (47%), Gaps = 50/464 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   ++A Y  ++   ++ K F      L +M    C      + N++         
Sbjct: 37  KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRT 96

Query: 147 ERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  +++  ++    R+K   P++   +  +  L E  ++D A+  L+         P+  
Sbjct: 97  KDAVKLLDEM----RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF-PDVV 151

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N  IK  CK   ++ A + L  M  +    P++++Y+T+I+GLCK+G    A  + ++
Sbjct: 152 TYNSFIKGLCKCDRVDEARKFLARMPVT----PDVVSYTTVINGLCKSGDLDSASRMLDQ 207

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M ++    PD +TY+ LIDGFC+GG+V+RA  +++ M   GC PN+  Y +L+    + G
Sbjct: 208 MTNR-GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 266

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK------- 376
            + +A+++  EM+     PD + Y   I+  C+A RV +A  +   M ERGC        
Sbjct: 267 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 326

Query: 377 ----------------------------ADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
                                        DI+ + ++L GLC+ G+ +EA  +  K+  +
Sbjct: 327 MLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386

Query: 409 GI-YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            I   +   Y ++L+  C++ +++KA+++ + ML R    +  T N L+  LC      D
Sbjct: 387 KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSD 445

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           A   L  +V+ GF P+  ++  LV+ +C+  K   A EL +E V
Sbjct: 446 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAV 489



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 205/453 (45%), Gaps = 54/453 (11%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
            KG + N  TY  I++ L   +K +    +L +M           + + +K    C   +
Sbjct: 108 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 167

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
              +   ++ P+T   P + + +T +N L +S  +D A   L          P+   ++ 
Sbjct: 168 EARKFLARM-PVT---PDVVSYTTVINGLCKSGDLDSASRMLDQMTNR-GCTPDVVTYSS 222

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   CK G +E A  +L  M K     PN++ Y++L+  L + G   +A ++  EM  +
Sbjct: 223 LIDGFCKGGEVERAMGLLDSMLKLGCR-PNMVAYNSLLGALHRLGHIGKAEDMLVEM-ER 280

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN------------------- 308
               PD ++YN  IDG C+  +V +AK + + M   GC PN                   
Sbjct: 281 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDD 340

Query: 309 ----------------VFNYTTLMNGFCKEGKLQEAKEVFDE-MKNFLLKPDTIGYTTLI 351
                           +  YT L++G CK G+  EA  +F + +   + +PD   Y  ++
Sbjct: 341 AITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVML 400

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +  C+  ++D+AL++ K+M ER C  ++VT+NI++ GLC + ++ +A  ML  +  +G  
Sbjct: 401 DSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFI 459

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA--- 468
            +  +Y  +++  C+ G+   A+EL    +  G +P   T + L+  L    MAE+A   
Sbjct: 460 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL 519

Query: 469 ----AIALFGLVEMGFKPESD---SWALLVELI 494
                +AL+  + +G+           L VELI
Sbjct: 520 FTKLDVALWNAMILGYAENGSGDLGLKLFVELI 552



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 137/241 (56%), Gaps = 5/241 (2%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           PDA T+ +L+ G CR  ++++A++++  MK  GC P+   Y  L++G+ K     +A + 
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 332 FDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
             EM KN  L P  + YT +++  C+AGR  +A++LL EM+++GC  +I T+N+I+ GLC
Sbjct: 68  LAEMVKNHCL-PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
            E K++EA  MLE++   G + +  +Y   +   C+   +++A + L  M      P   
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVV 183

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +   ++  LCK+G  + A+  L  +   G  P+  +++ L++  C+G ++  A  LLD +
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 511 V 511
           +
Sbjct: 244 L 244



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 3/211 (1%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M +  C P+ F +  L+ G C+  +L++A+++   MK     PD   Y  LI+ + +A  
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
             +A + L EM +  C   +VT+  I+ GLC+ G+ ++A+ +L+++   G   N  +Y +
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C++ +L++A ++L  M  RG+ P   T N  +  LCK    ++A      L  M 
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMP 177

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
             P+  S+  ++  +C+   L  A  +LD++
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQM 208



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 157/351 (44%), Gaps = 18/351 (5%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E++GF  +  +Y   +D L + ++ +   AV  +M    C  +   +  L++        
Sbjct: 279 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKEL 338

Query: 147 ERVLEMFHKIHPITREKPSLKAI---STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
           +  + +  +     REK  +  I   +  L+ L +  + D A             +P+  
Sbjct: 339 DDAITLVEQ----AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 394

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N+++  HCKR  ++ A ++ K+M +      N++T++ L+ GLC + R  +A  +   
Sbjct: 395 FYNVMLDSHCKRRQIDKALQIHKQMLERNCC--NVVTWNILVHGLCVDDRLSDAETMLLT 452

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           MV  +  +PD +TY  L+D  C+ GK   A ++ E     GC P+V  Y+ L+ G   E 
Sbjct: 453 MVD-EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHEN 511

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
             +EA  +F ++   L     +GY          G  D  L+L  E+ E   + +  TF 
Sbjct: 512 MAEEAYLLFTKLDVALWNAMILGYA-------ENGSGDLGLKLFVELIESDVEPNARTFG 564

Query: 384 I-ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
             I G L +   + +A G+ ++    G + +      +++   + G+LE+A
Sbjct: 565 KEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEA 615



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 77/144 (53%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M ++ C+ D  TF I+L GLCR  ++E+A  +L ++   G   + A Y  +++   +  +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
             +A + L  M+    LP   T   ++  LCKAG  +DA   L  + + G  P   ++ +
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           +VE +C  RKL  A ++L+E+ ++
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVR 144


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 167/312 (53%), Gaps = 2/312 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N LI   CK   +  AFE  +EMK   +  PN+I+YSTLID LCK G  + AI
Sbjct: 199 EPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLK-PNVISYSTLIDALCKEGMMQMAI 257

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           + F +M ++  +LP+  TY+ LID  C+ G +  A  + + M     + N+  YTTL++G
Sbjct: 258 KFFVDM-TRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDG 316

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            C+EG + EA+E+F  M    + P+   YT LI+   +   +D+A+EL  EM+E+  K D
Sbjct: 317 LCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           I+ +  I+ GLC E K+EE   ++ ++   GI  N   Y  +++   + G   +AI LL 
Sbjct: 377 ILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLE 436

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M   G      T   L+  LCK G+ ++A      + +   +P    +  L++ +C+  
Sbjct: 437 EMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNN 496

Query: 499 KLLFAFELLDEL 510
            +  A +L DE+
Sbjct: 497 CIGDAKKLFDEM 508



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 208/427 (48%), Gaps = 4/427 (0%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           ++ G   +  TY T++D   +    +    +  +M +  C+     +  L+  F      
Sbjct: 159 KKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGM 218

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            R  E F ++      KP++ + ST ++ L +   + +A  F       + L PN   ++
Sbjct: 219 LRAFEFFREMKD-KDLKPNVISYSTLIDALCKEGMMQMAIKFF-VDMTRVGLLPNEFTYS 276

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +CK G L  AF +  EM +  +   N++TY+TL+DGLC+ G   EA ELF  M  
Sbjct: 277 SLIDANCKAGNLGEAFMLADEMLQEHVDL-NIVTYTTLLDGLCEEGMMNEAEELFRAM-G 334

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           K  + P+   Y  LI G  +   +D+A ++   M+     P++  + T++ G C E KL+
Sbjct: 335 KAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLE 394

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           E K +  EMK   +  + + YTTL++ + +AG   EA+ LL+EM++ G +  +VTF  ++
Sbjct: 395 ECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALI 454

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+ G ++EA+    ++    +  N A Y  +++  C+   +  A +L   M  +  +
Sbjct: 455 DGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMI 514

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P       ++    K G  ++A      ++EMG + +  ++  LV  + +  ++  A + 
Sbjct: 515 PDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKF 574

Query: 507 LDELVIK 513
           L E++ K
Sbjct: 575 LAEMIGK 581



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 18/415 (4%)

Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF-------HKIHPITREK--PSLKA 168
            R  T   C     +F   M   +N  L E VL  +        +I   TR    P    
Sbjct: 5   FRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGV 64

Query: 169 ISTCLNLLIESNQVDLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
                ++L+E   ++ A Q FL+ +   +  K  +C  N  +    K G  + + +  ++
Sbjct: 65  FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSC--NAFLHRLSKAGEGDLSRDFFRD 122

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M  + ++ P + TY+ +I  +CK G    A  LFE+M  K  + PD +TYN LIDG+ + 
Sbjct: 123 MVGAGIA-PTVFTYNIMIGHVCKEGDMLTARSLFEQM-KKMGLTPDIVTYNTLIDGYGKI 180

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G +D +  + E MK  GC P+V  Y  L+N FCK   +  A E F EMK+  LKP+ I Y
Sbjct: 181 GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISY 240

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           +TLI+  C+ G +  A++   +M   G   +  T++ ++   C+ G + EA  + +++  
Sbjct: 241 STLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ 300

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
           + + LN  +Y  +L+  C++G + +A EL R M   G  P+      L+    K   + D
Sbjct: 301 EHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKV-RSMD 359

Query: 468 AAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
            A+ LF  + E   KP+   W  +V  +C   KL     ++ E+  KESG    P
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEM--KESGIGANP 412



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 185/395 (46%), Gaps = 5/395 (1%)

Query: 52  DARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF 111
           D   +   IS+   I  +  E   Q A++ F  ++ + G   N  TY++++D   +    
Sbjct: 230 DKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT-RVGLLPNEFTYSSLIDANCKAGNL 288

Query: 112 EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST 171
                +  +M  E    +   +  L+       +     E+F  +       P+L+A + 
Sbjct: 289 GEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGK-AGVTPNLQAYTA 347

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
            ++  I+   +D A        +   +KP+  ++  ++   C    LE    ++ EMK+S
Sbjct: 348 LIHGHIKVRSMDKAMELFNEMREK-DIKPDILLWGTIVWGLCSESKLEECKIIMTEMKES 406

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +   N + Y+TL+D   K G   EAI L EEM      +   +T+  LIDG C+ G V 
Sbjct: 407 GIG-ANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVT-VVTFCALIDGLCKRGLVQ 464

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A      M ++   PNV  YT L++G CK   + +AK++FDEM++  + PD I YT +I
Sbjct: 465 EAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMI 524

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +   + G   EAL +  +M E G + D+  +  ++ GL + G++++A   L ++   GI 
Sbjct: 525 DGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGII 584

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            ++     +L    + G +++AIEL   ++ +G +
Sbjct: 585 PDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 170/316 (53%), Gaps = 4/316 (1%)

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           R +E F ++   +  +P+L   +T +    +  +  +A   LK  ++    +P+  I+N 
Sbjct: 172 RAMEFFDEMVA-SGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG-RPDIVIYNT 229

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   CK   +  A ++  E+K   +  P++ TYS L+ GLC + +  EA  LF EM+S 
Sbjct: 230 IIDGLCKDRLVSEALDIFSEIKGKGVR-PDVFTYSILMHGLCNSDQKEEASALFNEMMSL 288

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + I+PD +T+N+L+D  C+ G +  A+ I++ M   G  PN   Y +LMNG+C + K+ E
Sbjct: 289 N-IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFE 347

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A+ VFD M      P+ + Y  LIN +C+A R+DEA EL  EM  RG   +   +N ++ 
Sbjct: 348 ARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLIS 407

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G+  EA  + + +   G   +  +  I+L+  C+ G L+ A+ L R M      P
Sbjct: 408 GLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKP 467

Query: 448 HYATSNELLVRLCKAG 463
           +  T + L+  + K+G
Sbjct: 468 NLVTYDILIRAMYKSG 483



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 174/315 (55%), Gaps = 2/315 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           LR++ +   FNILI    +   ++ AF VL ++ K     P+ +T+S+LI+GLC   +F 
Sbjct: 113 LRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFE-PDAVTFSSLINGLCFEDKFA 171

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+E F+EMV+     P+  TYN +I GFC+ GK   A  +++ M   G  P++  Y T+
Sbjct: 172 RAMEFFDEMVASGY-QPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTI 230

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CK+  + EA ++F E+K   ++PD   Y+ L++  C + + +EA  L  EM     
Sbjct: 231 IDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNI 290

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             D+VTFNI++  LC+EG + EA G+++ +   G+  N A+Y  ++N  C + ++ +A  
Sbjct: 291 MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARM 350

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +   M+ +G +P+  + N L+   CKA   ++A      +   G  P + ++  L+  +C
Sbjct: 351 VFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLC 410

Query: 496 RGRKLLFAFELLDEL 510
           +  +   A EL  ++
Sbjct: 411 QAGRHCEARELFKDM 425



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 2/301 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  +P+   F+ LI   C       A E   EM  S    PNL TY+T+I G CK G+  
Sbjct: 148 LGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQ-PNLHTYNTIIKGFCKIGKTT 206

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A+ L ++M  K    PD + YN +IDG C+   V  A  I   +K  G  P+VF Y+ L
Sbjct: 207 VAVGLLKKM-DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSIL 265

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           M+G C   + +EA  +F+EM +  + PD + +  L++  C+ G + EA  ++K M E+G 
Sbjct: 266 MHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           + +  T+N ++ G C + K+ EA  + + +   G   N  SY I++N  C+   +++A E
Sbjct: 326 EPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE 385

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   M  RG +P+    N L+  LC+AG   +A      +   G  P+  +  +L++ +C
Sbjct: 386 LFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLC 445

Query: 496 R 496
           +
Sbjct: 446 K 446



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 199/406 (49%), Gaps = 10/406 (2%)

Query: 98  YATILDKLARYKKFEAVDAVLRQ---MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
           +  +L  L R K +  V ++ ++   +  E   FH  I +N    FS     +    +  
Sbjct: 87  FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINC---FSRLQRVDFAFSVLG 143

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
           KI  +  E P     S+ +N L   ++   A  F          +PN   +N +IK  CK
Sbjct: 144 KIIKLGFE-PDAVTFSSLINGLCFEDKFARAMEFFDEMVAS-GYQPNLHTYNTIIKGFCK 201

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
            G    A  +LK+M K+    P+++ Y+T+IDGLCK+    EA+++F E+  K  + PD 
Sbjct: 202 IGKTTVAVGLLKKMDKAG-GRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKG-VRPDV 259

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            TY++L+ G C   + + A  +   M +    P+V  +  L++  CKEG L EA+ +   
Sbjct: 260 FTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKI 319

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M    ++P+   Y +L+N +C   +V EA  +   M  +GC  ++V++NI++ G C+  +
Sbjct: 320 MIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQR 379

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           I+EA  + +++ + G+  N  +Y  +++  CQ G   +A EL + M  +G  P   T   
Sbjct: 380 IDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTI 439

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
           LL  LCK G  ++A      + +   KP   ++ +L+  + +  K+
Sbjct: 440 LLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 142/278 (51%), Gaps = 1/278 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P ++ +  L+  L +   +   + L  + +   +I  D   +N+LI+ F R  +VD A  
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSL-SKRIELLRIERDVFHFNILINCFSRLQRVDFAFS 140

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  +   G  P+   +++L+NG C E K   A E FDEM     +P+   Y T+I  FC
Sbjct: 141 VLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFC 200

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+   A+ LLK+M + G + DIV +N I+ GLC++  + EAL +  ++   G+  +  
Sbjct: 201 KIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVF 260

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y I+++  C   + E+A  L   M+    +P   T N L+ +LCK GM  +A   +  +
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +E G +P   ++  L+   C   K+  A  + D ++ K
Sbjct: 321 IEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            T+  ++DKL +         +++ M  +  + +   + +LM  +    L  +V E    
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYC---LQNKVFEARMV 351

Query: 156 IHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHH 212
              +  +   P++ + +  +N   ++ ++D A+    +     R L PNT  +N LI   
Sbjct: 352 FDAMITKGCMPNVVSYNILINGYCKAQRIDEAREL--FDEMSFRGLIPNTFNYNTLISGL 409

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL- 271
           C+ G    A E+ K+M+ +Q   P+L+T + L+D LCK G    A+ LF  M  +D  L 
Sbjct: 410 CQAGRHCEARELFKDMQ-AQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM--QDSCLK 466

Query: 272 PDALTYNVLIDGFCRGGKVDR 292
           P+ +TY++LI    + GK+ R
Sbjct: 467 PNLVTYDILIRAMYKSGKIYR 487



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 87/191 (45%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C    +++A   F+ M +    P  + +  L++   R       L L K ++    + D+
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             FNI++    R  +++ A  +L K+   G   +  ++  ++N  C + +  +A+E    
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G+ P+  T N ++   CK G    A   L  + + G +P+   +  +++ +C+ R 
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 500 LLFAFELLDEL 510
           +  A ++  E+
Sbjct: 240 VSEALDIFSEI 250


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 193/405 (47%), Gaps = 4/405 (0%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N  T+   +  L R  K      +L++M  E C      +  L+         
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +   E+F K+    R KP      T L+   ++  +D  + F     +   + P+   F 
Sbjct: 310 DCAKEVFEKMK-TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFT 367

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           IL+   CK G    AF+ L  M+  Q   PNL TY+TLI GL +  R  +A+ELF  M S
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMR-DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              + P A TY V ID + + G    A +  E MK  G  PN+      +    K G+ +
Sbjct: 427 L-GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EAK++F  +K+  L PD++ Y  ++ C+ + G +DEA++LL EM E GC+ D++  N ++
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             L +  +++EA  M  ++    +     +Y  +L    + G++++AIEL   M+ +G  
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           P+  T N L   LCK      A   LF +++MG  P+  ++  ++
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 196/388 (50%), Gaps = 21/388 (5%)

Query: 113  AVDAVLRQMTYETCKFHEGIFLNLMKH---FSNCSLHERVLEMFHKIHPITREKPSLKAI 169
            AV    R +    C+  + I + ++++    +N S    + E F K   +   +P L   
Sbjct: 732  AVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV---QPKLPTY 788

Query: 170  STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI-----FNILIKHHCKRGTLESAFEV 224
            +  +  L+E++ +++AQ+        L++K   CI     +N L+  + K G ++  FE+
Sbjct: 789  NLLIGGLLEADMIEIAQDVF------LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842

Query: 225  LKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGF 284
             KEM   +    N IT++ +I GL K G   +A++L+ +++S     P A TY  LIDG 
Sbjct: 843  YKEMSTHECE-ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901

Query: 285  CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
             + G++  AK++ E M + GC PN   Y  L+NGF K G+   A  +F  M    ++PD 
Sbjct: 902  SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961

Query: 345  IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
              Y+ L++C C  GRVDE L   KE+KE G   D+V +N+I+ GL +  ++EEAL +  +
Sbjct: 962  KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021

Query: 405  LWYD-GIYLNKASYR-IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +    GI  +  +Y  ++LN     G +E+A ++   +   G  P+  T N L+     +
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIA-GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080

Query: 463  GMAEDAAIALFGLVEMGFKPESDSWALL 490
            G  E A      +V  GF P + ++  L
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 211/470 (44%), Gaps = 55/470 (11%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE-GIFLNLMKHFSNCSL 145
           +++    +  TY TI   L+       V   L+Q  Y   K  E G  LN   +  N  +
Sbjct: 145 QKRIIKRDTNTYLTIFKSLS-------VKGGLKQAPYALRKMREFGFVLNAYSY--NGLI 195

Query: 146 H--------ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           H           +E++ ++  +   +PSL+  S+ +  L +   +D     LK   + L 
Sbjct: 196 HLLLKSRFCTEAMEVYRRM-ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLK-EMETLG 253

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN   F I I+   + G +  A+E+LK M       P+++TY+ LID LC   +   A
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCG-PDVVTYTVLIDALCTARKLDCA 312

Query: 258 IELFEEM----------------------------------VSKDQILPDALTYNVLIDG 283
            E+FE+M                                  + KD  +PD +T+ +L+D 
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ G    A   ++ M++ G  PN+  Y TL+ G  +  +L +A E+F  M++  +KP 
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y   I+ + ++G    ALE  ++MK +G   +IV  N  L  L + G+  EA  +  
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
            L   G+  +  +Y +++    + GE+++AI+LL  M+  G  P     N L+  L KA 
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             ++A      + EM  KP   ++  L+  + +  K+  A EL + +V K
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 203/413 (49%), Gaps = 14/413 (3%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++   I  +   ++  CA E+F  +   +    +  TY T+LD+ +  +  ++V     
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGR-HKPDRVTYITLLDRFSDNRDLDSVKQFWS 352

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLL 176
           +M  +        F  L+             +       + R++   P+L   +T +  L
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD----VMRDQGILPNLHTYNTLICGL 408

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           +  +++D A      + + L +KP    + + I ++ K G   SA E  ++MK   ++ P
Sbjct: 409 LRVHRLDDALELFG-NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA-P 466

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAKK 295
           N++  +  +  L K GR REA ++F  +  KD  ++PD++TYN+++  + + G++D A K
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGL--KDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M  NGC P+V    +L+N   K  ++ EA ++F  MK   LKP  + Y TL+    
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G++ EA+EL + M ++GC  + +TFN +   LC+  ++  AL ML K+   G   +  
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 644

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +Y  ++    + G++++A+     M  +   P + T   LL  + KA + EDA
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDA 696



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 192/392 (48%), Gaps = 45/392 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    +T  + L ++++V LA   L +    +   P+   +N +I    K G ++ A  
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKML-FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL----------------FEEMVSK 267
              +MKK  + YP+ +T  TL+ G+ K     +A ++                +E+++  
Sbjct: 665 FFHQMKK--LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722

Query: 268 ---DQILPDALTYN--VLIDGFCRGG---------------KVDRAKKIME-FMKNNGCN 306
              +  + +A++++  ++ +G CR G                V  A+ + E F K+ G  
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ 782

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  Y  L+ G  +   ++ A++VF ++K+    PD   Y  L++ + ++G++DE  EL
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-SYRIVLNFSC 425
            KEM    C+A+ +T NI++ GL + G +++AL +   L  D  +   A +Y  +++   
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPES 484
           + G L +A +L   ML  G  P+ A  N L+    KAG A DAA ALF  +V+ G +P+ 
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA-DAACALFKRMVKEGVRPDL 961

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIKESG 516
            ++++LV+ +C   ++        EL  KESG
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKEL--KESG 991



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 10/349 (2%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            A  +F   ++  G      TY  ++  L      E    V  Q+    C      +  L+
Sbjct: 768  ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827

Query: 138  KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
              +      + + E++ ++     E  ++   +  ++ L+++  VD A +          
Sbjct: 828  DAYGKSGKIDELFELYKEMSTHECEANTITH-NIVISGLVKAGNVDDALDLYYDLMSDRD 886

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY---PNLITYSTLIDGLCKNGRF 254
              P  C +  LI    K G L  A    K++ +  + Y   PN   Y+ LI+G  K G  
Sbjct: 887  FSPTACTYGPLIDGLSKSGRLYEA----KQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942

Query: 255  REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
              A  LF+ MV K+ + PD  TY+VL+D  C  G+VD      + +K +G NP+V  Y  
Sbjct: 943  DAACALFKRMV-KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001

Query: 315  LMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++NG  K  +L+EA  +F+EMK    + PD   Y +LI     AG V+EA ++  E++  
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061

Query: 374  GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            G + ++ TFN ++ G    GK E A  + + +   G   N  +Y  + N
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 169/347 (48%), Gaps = 8/347 (2%)

Query: 171 TCLNLLIESNQVDLAQNFLKYS---NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
           TC N ++E+ +VD     + Y     Q   +K +T  +  + K    +G L+ A   L++
Sbjct: 120 TC-NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRK 178

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M++      N  +Y+ LI  L K+    EA+E++  M+  +   P   TY+ L+ G  + 
Sbjct: 179 MREFGFVL-NAYSYNGLIHLLLKSRFCTEAMEVYRRMI-LEGFRPSLQTYSSLMVGLGKR 236

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
             +D    +++ M+  G  PNV+ +T  +    + GK+ EA E+   M +    PD + Y
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           T LI+  C A ++D A E+ ++MK    K D VT+  +L        ++       ++  
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
           DG   +  ++ I+++  C+ G   +A + L +M  +G LP+  T N L+  L +    +D
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416

Query: 468 AAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            A+ LFG +E +G KP + ++ + ++   +    + A E  +++  K
Sbjct: 417 -ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 38/293 (12%)

Query: 60   ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
            I+H   IS +        AL+++  +   + F+    TY  ++D L++  +      +  
Sbjct: 856  ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915

Query: 120  QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
             M    C+              NC+++  ++  F K                       +
Sbjct: 916  GMLDYGCR-------------PNCAIYNILINGFGK-----------------------A 939

Query: 180  NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
             + D A    K   +   ++P+   +++L+   C  G ++      KE+K+S ++ P+++
Sbjct: 940  GEADAACALFKRMVKE-GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN-PDVV 997

Query: 240  TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
             Y+ +I+GL K+ R  EA+ LF EM +   I PD  TYN LI      G V+ A KI   
Sbjct: 998  CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057

Query: 300  MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            ++  G  PNVF +  L+ G+   GK + A  V+  M      P+T  Y  L N
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/297 (20%), Positives = 129/297 (43%), Gaps = 7/297 (2%)

Query: 210 KHHCKRGTLESAFEVLKEMKKS-----QMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           K H +R ++  +   +K    S     + S P+L +   +  GL        +   F+ +
Sbjct: 49  KKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSV 108

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
                ++    T N +++     GK++    + + M+      +   Y T+      +G 
Sbjct: 109 AGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGG 168

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L++A     +M+ F    +   Y  LI+   ++    EA+E+ + M   G +  + T++ 
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GL +   I+  +G+L+++   G+  N  ++ I +    + G++ +A E+L+ M   G
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELICRGRKL 500
             P   T   L+  LC A    D A  +F  ++ G  KP+  ++  L++     R L
Sbjct: 289 CGPDVVTYTVLIDALCTA-RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 146/248 (58%), Gaps = 2/248 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+  +++ +I   CK   +  A++   EM    + +PN+ITYSTLI G C  G+   A 
Sbjct: 202 RPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGI-FPNVITYSTLIWGFCLAGQLMGAF 260

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L  EM+ K+ I P+  TYN+LID  C+ GKV  AKK++  M + G   +V  Y ++++G
Sbjct: 261 SLLNEMILKN-INPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDG 319

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK   L +A  +F +MK + ++P+   YT LI+  C+ GR+  A +L + +  +GC  D
Sbjct: 320 LCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCID 379

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           + T+N+++ GLC+EG  ++AL M  K+  +G   N  ++ I++    +K E +KA +LL 
Sbjct: 380 VRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLH 439

Query: 439 LMLCRGFL 446
            M+ +G L
Sbjct: 440 GMIAKGLL 447



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 181/359 (50%), Gaps = 10/359 (2%)

Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           +L  MKH+       R +E       +   +P+L  ++  +N      Q+  + + L   
Sbjct: 74  YLVKMKHYPTAISLSRQME-------VKGIEPNLVTLNILINCFCHLGQMAFSFSVLG-K 125

Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
              L  +P+T   N L+K  C +G ++ +     +   +Q    N ++Y TL++GLCK G
Sbjct: 126 ILKLGYQPDTITLNTLMKGLCLKGEVKRSLH-FHDKVVAQGFQMNQVSYGTLLNGLCKIG 184

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
             R A++L   M+      PD + Y+ +IDG C+   V++A      M   G  PNV  Y
Sbjct: 185 ETRCAVKLLR-MIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITY 243

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           +TL+ GFC  G+L  A  + +EM    + P+   Y  LI+  C+ G+V EA +LL EM  
Sbjct: 244 STLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHH 303

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G  AD+VT+N +L GLC+   +++A  +  K+   GI  NK +Y  +++  C+ G L+ 
Sbjct: 304 KGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKN 363

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           A +L + +L +G      T N ++  LCK GM + A      + + G  P + ++ +++
Sbjct: 364 AQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIII 422



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 160/325 (49%), Gaps = 45/325 (13%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           +GF  N  +Y T+L+ L                    CK  E          + C++  +
Sbjct: 164 QGFQMNQVSYGTLLNGL--------------------CKIGE----------TRCAV--K 191

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           +L M          +P +   ST ++ L +   V+ A +F    N    + PN   ++ L
Sbjct: 192 LLRMIED----RSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNAR-GIFPNVITYSTL 246

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   C  G L  AF +L EM    ++ PN+ TY+ LID LCK G+ +EA +L  EM  K 
Sbjct: 247 IWGFCLAGQLMGAFSLLNEMILKNIN-PNVYTYNILIDALCKEGKVKEAKKLLAEMHHKG 305

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
           Q   D +TYN ++DG C+   +D+A  +   MK  G  PN + YT L++G CK G+L+ A
Sbjct: 306 QP-ADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNA 364

Query: 329 KEVFDEMKNFLLKP---DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +++F   ++ L+K    D   Y  +I+  C+ G  D+AL +  +M++ GC  + VTF+II
Sbjct: 365 QKLF---QHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDII 421

Query: 386 LGGLCREGKIEEALGMLEKLWYDGI 410
           +  L  + + ++A  +L  +   G+
Sbjct: 422 IRSLFEKDENDKAEKLLHGMIAKGL 446



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 105/207 (50%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P +  +  ++    K      A  +  +M+   ++P+ +    LINCFC  G++  +  +
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           L ++ + G + D +T N ++ GLC +G+++ +L   +K+   G  +N+ SY  +LN  C+
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            GE   A++LLR++  R   P     + ++  LCK  +   A      +   G  P   +
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242

Query: 487 WALLVELICRGRKLLFAFELLDELVIK 513
           ++ L+   C   +L+ AF LL+E+++K
Sbjct: 243 YSTLIWGFCLAGQLMGAFSLLNEMILK 269


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 158/278 (56%), Gaps = 7/278 (2%)

Query: 168 AISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           A +T +N L    +V  A+  +     N H   +PN   +  ++   CK G  +SA  +L
Sbjct: 12  AFNTLMNGLCREGRVLEAEALVDRMVENGH---QPNEVTYGTIVNGMCKMGDTDSALNLL 68

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
           ++M +S +   +++ Y+ +ID LCK+G   +A  LF EM  K  I P+ LTYN +IDG C
Sbjct: 69  RKMDESHIK-ADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDK-GIFPNVLTYNCMIDGCC 126

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
             GK   A++++  M  +  +P+V  +  L+N F KEGK+ EA+E++ EM    + PDTI
Sbjct: 127 SYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTI 186

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y +LI+ FC+  R+D+A  +   M  +G   +++T N ++GG CR  ++++ + +L ++
Sbjct: 187 TYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEM 246

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
              G+  +  SY  +++  CQ G+L  A +L + M+ +
Sbjct: 247 LRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 146/275 (53%), Gaps = 1/275 (0%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           +++ ++TL++GLC+ GR  EA  L + MV      P+ +TY  +++G C+ G  D A  +
Sbjct: 9   DVVAFNTLMNGLCREGRVLEAEALVDRMVENGH-QPNEVTYGTIVNGMCKMGDTDSALNL 67

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           +  M  +    +V  YT +++  CK+G   +A+ +F EM +  + P+ + Y  +I+  C 
Sbjct: 68  LRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCS 127

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G+  +A +LL++M E     D+VTFN ++    +EGKI EA  +  ++    I+ +  +
Sbjct: 128 YGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTIT 187

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C+   L+ A  +  LM+ +G  P+  T N L+   C+A   +D    L  ++
Sbjct: 188 YNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEML 247

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             G  P+S S+  L+   C+   L  A +L  E++
Sbjct: 248 RRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMI 282



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 39/283 (13%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G   N  TY TI++ + +    ++   +LR+M     K    I+  ++        H 
Sbjct: 38  ENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHS 97

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +   +F ++H         K I                              PN   +N 
Sbjct: 98  KAQNLFTEMHD--------KGIF-----------------------------PNVLTYNC 120

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +I   C  G    A ++L++M +S +  P+++T++ LI+   K G+  EA EL+ EM+ +
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVD-PDVVTFNALINAFVKEGKISEAEELYREMLGR 179

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           + I PD +TYN LIDGFC+  ++D AK I + M + G +PNV    TL+ G C+  ++ +
Sbjct: 180 N-IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDD 238

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
             ++  EM    L PD++ Y TLI+ FC+AG ++ A +L +EM
Sbjct: 239 GIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 110/214 (51%)

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   GC  +V  + TLMNG C+EG++ EA+ + D M     +P+ + Y T++N  C+ G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
            D AL LL++M E   KAD+V +  I+  LC++G   +A  +  ++   GI+ N  +Y  
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C  G+   A +LLR M+     P   T N L+    K G   +A      ++   
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             P++ ++  L++  C+  +L  A  + D +V K
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSK 214


>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
          Length = 689

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 163/298 (54%), Gaps = 2/298 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   S  +N    S  VD A  F K +   L L+ N   +N LI  +   G +E    
Sbjct: 8   PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 67

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VL+ M +  +S  N++TY++LI G CK G   EA  +FE ++ + +++ D   Y VL+DG
Sbjct: 68  VLRLMSERGVS-RNVVTYTSLIKGYCKKGLMEEAEHVFE-LLKEKKLVADQHMYGVLMDG 125

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +CR G++  A ++ + M   G   N     +L+NG+CK G+L EA+++F  M ++ LKPD
Sbjct: 126 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 185

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
              Y TL++ +CRAG VDEAL+L  +M ++     ++T+NI+L G  R G   + L + +
Sbjct: 186 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 245

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            +   G+  ++ S   +L    + G+  +A++L   +L RG L    T N ++  LCK
Sbjct: 246 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCK 303



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 20/399 (5%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   N  TY ++++  A     E +  VLR M+      +   + +L+K +    L E  
Sbjct: 41  GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 100

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIES--------NQVDLAQNFLKYSNQHLRLKPN 201
             +F     + +EK  L A      +L++         + V +  N ++     + ++ N
Sbjct: 101 EHVFE----LLKEK-KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE-----IGVRTN 150

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
           T I N LI  +CK G L  A ++   M    +  P+  TY+TL+DG C+ G   EA++L 
Sbjct: 151 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLK-PDHHTYNTLVDGYCRAGYVDEALKLC 209

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
           ++M  K +++P  +TYN+L+ G+ R G       + + M   G N +  + +TL+    K
Sbjct: 210 DQMCQK-EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 268

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G   EA ++++ +    L  DTI    +I+  C+  +V+EA E+L  +    CK  + T
Sbjct: 269 LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT 328

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +  +  G  + G ++EA  + E +   GI+     Y  +++ + +   L K  +L+  + 
Sbjct: 329 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 388

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
            RG  P  AT   L+   C  GM + A    F ++E G 
Sbjct: 389 ARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 427



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 161/315 (51%), Gaps = 1/315 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+    +I++  +C+ G ++ A    KE + S     N++TY++LI+G    G   E 
Sbjct: 6   VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV-EG 64

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +     ++S+  +  + +TY  LI G+C+ G ++ A+ + E +K      +   Y  LM+
Sbjct: 65  MTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 124

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+C+ G++++A  V D M    ++ +T    +LIN +C++G++ EA ++   M +   K 
Sbjct: 125 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 184

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D  T+N ++ G CR G ++EAL + +++    +     +Y I+L    + G     + L 
Sbjct: 185 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 244

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           ++ML RG      + + LL  L K G   +A      ++  G   ++ +  +++  +C+ 
Sbjct: 245 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 304

Query: 498 RKLLFAFELLDELVI 512
            K+  A E+LD + I
Sbjct: 305 EKVNEAKEILDNVNI 319



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 179/392 (45%), Gaps = 46/392 (11%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLES 220
           KP     +T ++    +  VD A   LK  +Q  +  + P    +NIL+K + + G    
Sbjct: 183 KPDHHTYNTLVDGYCRAGYVDEA---LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 239

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
              + K M K  ++  + I+ STL++ L K G F EA++L+E ++++  +L D +T NV+
Sbjct: 240 VLSLWKMMLKRGVN-ADEISCSTLLEALFKLGDFNEAMKLWENVLARG-LLTDTITLNVM 297

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           I G C+  KV+ AK+I++ +    C P V  Y  L +G+ K G L+EA  V + M+   +
Sbjct: 298 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 357

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P    Y TLI+   +   +++  +L+ E++ RG    + T+  ++ G C  G I++A  
Sbjct: 358 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 417

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL-----MLCRGF---------- 445
              ++   GI LN      + N   +  ++++A  LL+      +L  G+          
Sbjct: 418 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEAS 477

Query: 446 -----------------------LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FK 481
                                  +P+    N  +  LCKAG  EDA      L+    F 
Sbjct: 478 ATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI 537

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P+  ++ +L+        +  AF L DE+ +K
Sbjct: 538 PDEYTYTILIHGCAIAGDINKAFTLRDEMALK 569



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 80/139 (57%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN I Y+  I GLCK G+  +A +LF +++S D+ +PD  TY +LI G    G +++A  
Sbjct: 502 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 561

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           + + M   G  PN+  Y  L+ G CK G +  A+ +  ++    + P+ I Y TLI+   
Sbjct: 562 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 621

Query: 356 RAGRVDEALELLKEMKERG 374
           ++G V EA+ L ++M E+G
Sbjct: 622 KSGNVAEAMRLKEKMIEKG 640



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 105/204 (51%), Gaps = 7/204 (3%)

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN----GCNPNVFNYTTLMNGFCKEGK 324
           ++ PD  T +++++ +CR G VD+A   M F K      G   NV  Y +L+NG+   G 
Sbjct: 5   EVSPDVFTCSIVVNAYCRSGNVDKA---MVFAKETESSLGLELNVVTYNSLINGYAMIGD 61

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++    V   M    +  + + YT+LI  +C+ G ++EA  + + +KE+   AD   + +
Sbjct: 62  VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 121

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G CR G+I +A+ + + +   G+  N      ++N  C+ G+L +A ++   M    
Sbjct: 122 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 181

Query: 445 FLPHYATSNELLVRLCKAGMAEDA 468
             P + T N L+   C+AG  ++A
Sbjct: 182 LKPDHHTYNTLVDGYCRAGYVDEA 205



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 8/254 (3%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    +  LI   C  G ++ A+    EM +  ++  N+   S + + L +  +  EA
Sbjct: 392 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL-NVNICSKIANSLFRLDKIDEA 450

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN----PNVFNYT 313
             L +++V  D +LP   +    ++         + +KI E ++N+       PN   Y 
Sbjct: 451 CLLLQKIVDFDLLLPGYQSLKEFLEA--SATTCLKTQKIAESVENSTPKKLLVPNNIVYN 508

Query: 314 TLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             + G CK GKL++A+++F D + +    PD   YT LI+    AG +++A  L  EM  
Sbjct: 509 VAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMAL 568

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G   +IVT+N ++ GLC+ G ++ A  +L KL   GI  N  +Y  +++   + G + +
Sbjct: 569 KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 628

Query: 433 AIELLRLMLCRGFL 446
           A+ L   M+ +G +
Sbjct: 629 AMRLKEKMIEKGLV 642



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 1/210 (0%)

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEAL 364
           +P+VF  + ++N +C+ G + +A     E ++ L L+ + + Y +LIN +   G V+   
Sbjct: 7   SPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMT 66

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            +L+ M ERG   ++VT+  ++ G C++G +EEA  + E L    +  ++  Y ++++  
Sbjct: 67  RVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 126

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G++  A+ +   M+  G   +    N L+   CK+G   +A      + +   KP+ 
Sbjct: 127 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 186

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIKE 514
            ++  LV+  CR   +  A +L D++  KE
Sbjct: 187 HTYNTLVDGYCRAGYVDEALKLCDQMCQKE 216


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 180/353 (50%), Gaps = 9/353 (2%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           K    N  TY++I+  L +  K E    VL +M    C      F  +M+ F+  +  E+
Sbjct: 110 KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 169

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIF 205
             E++  +   +  KP   +    ++ L +  ++D +   L  S   +R     PN   F
Sbjct: 170 AREVYQHMVE-SGYKPDNVSYHILIHGLAKIGKLDESLKIL--SEMAMRAAGYVPNVITF 226

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           + LI   C+ G LE A EV   M ++    PN  TY+TLI GLC+  +  +A ELFE+M 
Sbjct: 227 STLIHGLCRTGELEKALEVFGSMLEAGCK-PNKYTYTTLIAGLCRAEKVIQARELFEKM- 284

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGK 324
           ++  I PDA+ YN LI G+C+ G +D A+K+   M    G  P +  + TL++GFCK GK
Sbjct: 285 TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGK 344

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L  A E+  EM    L  DT  Y  LI    RA ++DEALE+ K+M+E+    D V+   
Sbjct: 345 LGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVS 404

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +GGLC+ G I++A  + E     G   N  ++RI+     + G +E A +L+
Sbjct: 405 FVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 195/393 (49%), Gaps = 5/393 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F ++  +K    +  TY T++  L      E    +L +M  +    +   + +++
Sbjct: 64  ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           K     +  E   ++  ++       P + A +  +     SN ++ A+   ++  +   
Sbjct: 124 KSLVKEAKPEESYKVLEEMMAAGC-NPDVFAFNGVMQGFARSNNMEKAREVYQHMVES-G 181

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
            KP+   ++ILI    K G L+ + ++L EM      Y PN+IT+STLI GLC+ G   +
Sbjct: 182 YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEK 241

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A+E+F  M+      P+  TY  LI G CR  KV +A+++ E M      P+   Y +L+
Sbjct: 242 ALEVFGSMLEAG-CKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300

Query: 317 NGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
            G+CK G + EA++++ EM     L+P  + + TLI+ FC+ G++  A EL+ EM  +G 
Sbjct: 301 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 360

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
            AD  T+ I++ GL R  K++EAL + +++      L+  S    +   C+ G +++A  
Sbjct: 361 AADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA 420

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +       G +P+  T   L   L K G  EDA
Sbjct: 421 VFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 167/318 (52%), Gaps = 6/318 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+LI   C  G    A ++ + MK+ +   P+  TY+TLI GLC +G    A +
Sbjct: 43  PSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARK 102

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  EM  K+ I  +  TY+ +I    +  K + + K++E M   GCNP+VF +  +M GF
Sbjct: 103 LLSEMRDKN-IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGF 161

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER--GCKA 377
            +   +++A+EV+  M     KPD + Y  LI+   + G++DE+L++L EM  R  G   
Sbjct: 162 ARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVP 221

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           +++TF+ ++ GLCR G++E+AL +   +   G   NK +Y  ++   C+  ++ +A EL 
Sbjct: 222 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELF 281

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE--MGFKPESDSWALLVELIC 495
             M      P     N L+   CK G + D A  L+  +    G +P   ++  L++  C
Sbjct: 282 EKMTQACIPPDAVAYNSLIAGYCKRG-SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340

Query: 496 RGRKLLFAFELLDELVIK 513
           +  KL  A EL+ E+  K
Sbjct: 341 KLGKLGRANELVAEMGTK 358



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 167/302 (55%), Gaps = 4/302 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   FN +++   +   +E A EV + M +S    P+ ++Y  LI GL K G+  E+++
Sbjct: 149 PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYK-PDNVSYHILIHGLAKIGKLDESLK 207

Query: 260 LFEEMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +  EM  +    +P+ +T++ LI G CR G++++A ++   M   GC PN + YTTL+ G
Sbjct: 208 ILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAG 267

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE-RGCKA 377
            C+  K+ +A+E+F++M    + PD + Y +LI  +C+ G +DEA +L +EM    G + 
Sbjct: 268 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 327

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            IVTFN ++ G C+ GK+  A  ++ ++   G+  +  +YRI++    +  +L++A+E+ 
Sbjct: 328 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVY 387

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE-LICR 496
           + M  + FL    +    +  LCK G  + A        + G  P  +++ +L E LI  
Sbjct: 388 KQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKL 447

Query: 497 GR 498
           GR
Sbjct: 448 GR 449



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 6/302 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLN 135
           A E++  + E  G+  +N +Y  ++  LA+  K +    +L +M      +   +  F  
Sbjct: 170 AREVYQHMVES-GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFST 228

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+         E+ LE+F  +      KP+    +T +  L  + +V  A+   +   Q 
Sbjct: 229 LIHGLCRTGELEKALEVFGSMLEAGC-KPNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             + P+   +N LI  +CKRG+++ A ++ +EM       P ++T++TLIDG CK G+  
Sbjct: 288 C-IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 346

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A EL  EM +K  +  D  TY +LI G  R  K+D A ++ + M+      +  +  + 
Sbjct: 347 RANELVAEMGTKG-LAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 405

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G CK G + +A  VF+  +     P+   +  L     + GRV++A +L++  K R  
Sbjct: 406 VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465

Query: 376 KA 377
            A
Sbjct: 466 TA 467



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 1/208 (0%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  ++    K G L +A EVF+ MK+    P  + Y  LIN  C AG   +AL+L + MK
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 372 -ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            E+  + D  T+N ++ GLC  G  E A  +L ++    I  N  +Y  ++    ++ + 
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           E++ ++L  M+  G  P     N ++    ++   E A      +VE G+KP++ S+ +L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 491 VELICRGRKLLFAFELLDELVIKESGTI 518
           +  + +  KL  + ++L E+ ++ +G +
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYV 220



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/143 (20%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M +  C      ++ ++  L + G + +AL + E +  +    +  +Y +++N  C  GE
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 430 LEKAIELLRLMLCRGFL-PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
             KA++L + M     + P   T N L+  LC +G  E A   L  + +        +++
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 489 LLVELICRGRKLLFAFELLDELV 511
            +++ + +  K   ++++L+E++
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMM 143


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 192/373 (51%), Gaps = 23/373 (6%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESA 221
           PS+   +  ++   ++  +  A+N+    ++ LR    PN   +  LI  + K   +  A
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWF---DEMLRDNCTPNVVTYTSLIHAYLKARKVFDA 542

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS--------------- 266
            ++  EM   + S PN++TY+ LIDG CK G+  +A +++  M                 
Sbjct: 543 NKLF-EMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDD 601

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            D   P+ +TY  L+DG C+  +V+ A ++++ M  NGC PN   Y  L++GFCK GKL+
Sbjct: 602 NDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLE 661

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A+EVF +M      P+   Y++LIN   +  R+D  L++L +M E  C  ++V +  ++
Sbjct: 662 NAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMI 721

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+ GK EEA  ++ K+   G Y N  +Y  +++   + G++E+ +EL R M  +G  
Sbjct: 722 DGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCA 781

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P++ T   L+   C  G+ ++A   L  + +  +     S+  ++E     R+ + +  L
Sbjct: 782 PNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGL 839

Query: 507 LDELVIKESGTIQ 519
           LDEL   ES  ++
Sbjct: 840 LDELSENESVPVE 852



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 190/367 (51%), Gaps = 15/367 (4%)

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           ++M+ K+     E P++      ++ L ++N+V+ A   L   + +   +PN  +++ LI
Sbjct: 593 IDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVN-GCEPNQIVYDALI 651

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
              CK G LE+A EV  +M  S+  Y PNL TYS+LI+ L K  R    +++  +M+ ++
Sbjct: 652 DGFCKTGKLENAQEVFVKM--SERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKML-EN 708

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              P+ + Y  +IDG C+ GK + A ++M  M+  GC PNV  YT +++GF K GK+++ 
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            E++ +M +    P+ I Y  LIN  C  G +DEA  LL EMK+      I ++  I+ G
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
             RE     ++G+L++L  +     ++ YRI+++   + G LE A+ LL  +      P 
Sbjct: 829 FNRE--FITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSS---PS 883

Query: 449 YATSNE-----LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
            A +N+     L+  L  A   + A      ++     PE  ++  L++ + R  K   A
Sbjct: 884 LAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEA 943

Query: 504 FELLDEL 510
            +L D +
Sbjct: 944 LQLSDSI 950



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 167/334 (50%), Gaps = 22/334 (6%)

Query: 199 KPNTCIFNILIKHHCKRGTLE-SAFEVLKEMKKSQM----SYPNLITYSTLIDGLCKNGR 253
           +P   ++NI I   C    L  S    L E   S+M       N +  S     LC  G+
Sbjct: 374 QPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGK 433

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F +A E+  EM+SK   +PD  TY+ +I   C   KV++A  + E MK NG  P+V+ YT
Sbjct: 434 FDKAFEIICEMMSKG-FVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYT 492

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++ FCK G +Q+A+  FDEM      P+ + YT+LI+ + +A +V +A +L + M   
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE 552

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD------GIYL----------NKASY 417
           G K ++VT+  ++ G C+ G+I++A  +  ++  D       +Y           N  +Y
Sbjct: 553 GSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITY 612

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++  C+   +E+A ELL  M   G  P+    + L+   CK G  E+A      + E
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G+ P   +++ L+  + + ++L    ++L +++
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKML 706



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 159/322 (49%), Gaps = 17/322 (5%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           K +   +N LI+   +   L++AF V +EM  S        T       LCK GR  +A+
Sbjct: 202 KASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDG-CTLGCFAYSLCKAGRCGDAL 260

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            L E    K++ +PD + YN ++ G C       A  I++ M++  C PNV  Y  L++G
Sbjct: 261 SLLE----KEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSG 316

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
              +G+L   K +   M      P+   + +L++ +C++     A +L K+M + GC+  
Sbjct: 317 CLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPG 376

Query: 379 IVTFNIILGGLCREGKI--EEALGMLEKLWYD----GIYLNKASYRIVLNFS---CQKGE 429
            + +NI +G +C   ++   + L + EK + +    G+ LNK +   V NF+   C  G+
Sbjct: 377 YLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVN---VSNFARCLCGAGK 433

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            +KA E++  M+ +GF+P  +T ++++  LC A   E A +    + + G  P   ++ +
Sbjct: 434 FDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTI 493

Query: 490 LVELICRGRKLLFAFELLDELV 511
           L++  C+   +  A    DE++
Sbjct: 494 LIDSFCKAGLIQQARNWFDEML 515



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 162/347 (46%), Gaps = 39/347 (11%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++D L +  + E    +L  M+   C+ ++ ++  L+  F      E   E+F
Sbjct: 608 NIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF 667

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            K+       P+L   S+ +N L +  ++DL    L    ++    PN  I+  +I   C
Sbjct: 668 VKMSE-RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN-SCTPNVVIYTDMIDGLC 725

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G  E A+ ++ +M++    YPN+ITY+ +IDG  K G+  + +EL+ +M SK    P+
Sbjct: 726 KVGKTEEAYRLMLKMEEVG-CYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG-CAPN 783

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE----------- 322
            +TY VLI+  C  G +D A ++++ MK      ++ +Y  ++ GF +E           
Sbjct: 784 FITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDEL 843

Query: 323 ----------------------GKLQEAKEVFDEMKNF--LLKPDTIGYTTLINCFCRAG 358
                                 G+L+ A  + +E+ +   L   +   YT+LI     A 
Sbjct: 844 SENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHAS 903

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
           +VD+A EL   M  +    ++ TF  ++ GL R GK +EAL + + +
Sbjct: 904 KVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/484 (22%), Positives = 210/484 (43%), Gaps = 55/484 (11%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLA------------- 106
           +S    + ++   K P+  +E F   S Q G++H    Y  +++ L              
Sbjct: 98  LSEPLVVEVMNLVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKF 157

Query: 107 ----RYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE--RVLEMFHKIHPIT 160
               R    E +  +L  +  + C+   G++        N +L E  R+ +  +K  P T
Sbjct: 158 LMQIRDDDRELLRKLLNFLIQKCCR--NGMW--------NVALEELGRLKDFGYKASPTT 207

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKY---SNQHLRLKPNTCIFNILIKHHCKRGT 217
                    +  + + + ++++D A  FL +   SN   R+  + C         CK G 
Sbjct: 208 --------YNALIQVFLRADKLDTA--FLVHREMSNSGFRM--DGCTLGCFAYSLCKAGR 255

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
              A  +L++    +   P+ + Y+ ++ GLC+   F+EA+++ + M S   I P+ +TY
Sbjct: 256 CGDALSLLEK----EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI-PNVVTY 310

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
            +L+ G    G++ R K+I+  M   GC PN   + +L++ +CK      A ++F +M  
Sbjct: 311 RILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIK 370

Query: 338 FLLKPDTIGYTTLINCFCRAGRV--DEALELLK----EMKERGCKADIVTFNIILGGLCR 391
              +P  + Y   I   C    +   + LEL +    EM + G   + V  +     LC 
Sbjct: 371 CGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCG 430

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            GK ++A  ++ ++   G   + ++Y  V+ F C   ++EKA  L   M   G +P   T
Sbjct: 431 AGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYT 490

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              L+   CKAG+ + A      ++     P   ++  L+    + RK+  A +L + ++
Sbjct: 491 YTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMML 550

Query: 512 IKES 515
           ++ S
Sbjct: 551 LEGS 554



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 35/313 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+F  +SE +G+  N  TY+++++ L + K+ + V  VL +M   +C  +  I+ +++
Sbjct: 663 AQEVFVKMSE-RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMI 721

Query: 138 KHFSNCSLHERVLEMFHKI-----HP--ITREK-----PSLKAISTCLNLLIESNQVDLA 185
                    E    +  K+     +P  IT          +  I  CL L  +      A
Sbjct: 722 DGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCA 781

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT-YSTL 244
            NF+ Y               +LI H C  G L+ A  +L EMK  Q  +P  I+ Y  +
Sbjct: 782 PNFITY--------------RVLINHCCSTGLLDEAHRLLDEMK--QTYWPRHISSYRKI 825

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           I+G   N  F  +I L +E+ S+++ +P    Y +LID F + G+++ A  ++E + ++ 
Sbjct: 826 IEGF--NREFITSIGLLDEL-SENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSP 882

Query: 305 --CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
                N + YT+L+       K+ +A E++  M N  + P+   +  LI    R G+  E
Sbjct: 883 SLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQE 942

Query: 363 ALELLKEMKERGC 375
           AL+L   + +  C
Sbjct: 943 ALQLSDSICQMVC 955


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 216/446 (48%), Gaps = 28/446 (6%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM--TYETCKFH 129
           + + + AL+I N++ E+ G +     Y   +  L + +      +VL+ +  T  +C   
Sbjct: 10  KSDGKLALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFSCT-- 67

Query: 130 EGIFLNLMKHFSNC-SLHERVLEMFHKIHPITRE----------------KPSLKAISTC 172
             IF +L++  S   S +  V E+  K +   R+                K S  A ++ 
Sbjct: 68  -AIFTSLLRIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSI 126

Query: 173 LNLLIESNQVDLAQNFLKYS-NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
           L  L+E  +      FL+ S  +   L   TC  NIL+   C  G    A ++L++MK  
Sbjct: 127 LKALVEEGESKYVWLFLRESLARKFPLDVTTC--NILLNSLCTNGEFRKAEDMLQKMKSC 184

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +S  N  TY+T++    K GRF+ A+ + E+M  +D I  D  TYN++ID  CR  +  
Sbjct: 185 CLS--NSATYNTILHWYVKKGRFKAALCVLEDM-ERDSIQADIYTYNIMIDKLCRIKRSA 241

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
           RA  +++ M+ +   P+   Y TL+NGF  EGK+  A+ VF+ M    L P    YTT+I
Sbjct: 242 RAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMI 301

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           + +CR  R+D+AL +L EM+  G     +T++ +L G C+   +  AL ++  L   GI 
Sbjct: 302 DGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGIT 361

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
           +NK    I+++  CQ GE+ KA ++L+ ML  G  P   T + L+  +C+     +    
Sbjct: 362 INKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEI 421

Query: 472 LFGLVEMGFKPESDSWALLVELICRG 497
           L  + + G  P    +  L+   C+ 
Sbjct: 422 LSRMQKSGILPNDVLYTTLICYYCKA 447



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 207/420 (49%), Gaps = 8/420 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N+ATY TIL    +  +F+A   VL  M  ++ +     +  ++          R   + 
Sbjct: 188 NSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLL 247

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKH 211
            ++       P     +T +N      +++ A+      N  LR  L P+   +  +I  
Sbjct: 248 KRMRK-DDLTPDECTYNTLINGFFGEGKINHARCVF---NHMLRQTLVPSVATYTTMIDG 303

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
           +C+   ++ A  VL EM+ + +  P+ +TYS L++G CK      A++L  ++ S+   +
Sbjct: 304 YCRNRRIDKALSVLSEMEITGV-MPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITI 362

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
              +   +LIDGFC+ G++ +AK+I++ M  +G +P+V  Y+ L+NG C+  K+ E KE+
Sbjct: 363 NKTMC-TILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEI 421

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
              M+   + P+ + YTTLI  +C+AG V  AL+   ++  RG  A+ V  N +L    R
Sbjct: 422 LSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYR 481

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           EG I EA    + +    I  N  S+  +++  C +G++ +A  +   M+  G  P+  T
Sbjct: 482 EGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCT 541

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              LL  LC+ G    A   +F L+++    +  ++  L+  IC+   L  A ++ +++V
Sbjct: 542 YQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMV 601



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/541 (23%), Positives = 233/541 (43%), Gaps = 87/541 (16%)

Query: 48  DTCVDARKRSRFISHGAAISLIK--CE-KEPQCALEIFNTVSEQKGFNHNNATYATILDK 104
           D  VD + R   I+      LI   C+  E   A +I  ++ E  G + +  TY+ +++ 
Sbjct: 350 DLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLED-GIDPDVVTYSALING 408

Query: 105 LARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKP 164
           + R  K      +L +M       ++ ++  L+ ++      +  L+ F  I+     + 
Sbjct: 409 MCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIY-----RR 463

Query: 165 SLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
            L A     N L+ +      +  A++F +Y ++ + +  N+  FN +I  +C RG +  
Sbjct: 464 GLVANPVIHNALLRAFYREGMITEAEHFRQYMSR-MNISFNSVSFNCIIDSYCHRGKIVE 522

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLC------------------------------- 249
           AF V  +M +   S PN+ TY  L+ GLC                               
Sbjct: 523 AFSVYDDMVRYGHS-PNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALL 581

Query: 250 ----KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
               K G   EA+++ E+MV K+  LPD  TY +L+ GFCR GK+  A  +++ M   G 
Sbjct: 582 LGICKYGTLDEALDICEKMV-KNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGV 640

Query: 306 NPNVFNYT------------------------------------TLMNGFCKEGKLQEAK 329
            P+   YT                                    +LMNG+ K G +   K
Sbjct: 641 VPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIK 700

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +  +M    + P++  Y  L++ + + G+  ++L L K M  +G + D VT+ +++ GL
Sbjct: 701 RMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGL 760

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
              G I+ A+  LEK+  +GI+ +K  + I++    +K ++  A+ L   M C    P  
Sbjct: 761 SECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSS 820

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
            T + ++  L +    + +   L  ++++G +P    +  LV   CR  ++  AF L +E
Sbjct: 821 KTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEE 880

Query: 510 L 510
           +
Sbjct: 881 M 881



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 161/342 (47%), Gaps = 36/342 (10%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + IL+   C++G +  A  +L+ M +  +  P+ + Y+ L++GL   G+ + A  
Sbjct: 607 PDIHTYTILLSGFCRKGKILPALVMLQMMLEKGV-VPDTVAYTCLLNGLINEGQVKAASY 665

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +F+E++ K+ +  D + YN L++G+ +GG V+  K++M  M  N   PN  +Y  LM+G+
Sbjct: 666 VFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGY 725

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K G+  ++  ++  M    ++PD + Y  LI      G +D A++ L++M   G   D 
Sbjct: 726 VKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDK 785

Query: 380 VTFNIILGGLCREGKIEEAL-----------------------GMLEKLWYD-------- 408
           + F+I++     + K+  AL                       G++ K + D        
Sbjct: 786 LVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHE 845

Query: 409 ----GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
               G+  N   Y  ++N  C+ GE+++A  L   M   G +P     + ++  LC+ G 
Sbjct: 846 MLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGK 905

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            E+A I    ++  G  P   ++  L+  +C+  K+  A  L
Sbjct: 906 LEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHL 947



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 178/355 (50%), Gaps = 13/355 (3%)

Query: 168  AISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
            A ++ +N  ++   V+  +  +   Y N+   + PN+  +NIL+  + KRG    +  + 
Sbjct: 682  AYNSLMNGYLKGGNVNTIKRMMSDMYQNE---VYPNSASYNILMHGYVKRGQFSKSLYLY 738

Query: 226  KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
            K M +  +  P+ +TY  LI GL + G    A++  E+MV  + I PD L +++LI  F 
Sbjct: 739  KYMVRKGIR-PDNVTYRLLILGLSECGLIDIAVKFLEKMVL-EGIFPDKLVFDILITSFS 796

Query: 286  RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
               K+  A ++   MK    +P+   ++ ++NG  ++  L ++ EV  EM    L+P+  
Sbjct: 797  EKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHT 856

Query: 346  GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
             Y  L+N  CR G +D A  L +EMK  G     V  + I+ GLCR GK+EEA+ +   +
Sbjct: 857  HYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNM 916

Query: 406  WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM-LCRGFLPHYATSNELLVRLCKAGM 464
               G+    A++  +++  C++ ++  A+ L RLM LCR       + N L+  LCK   
Sbjct: 917  MRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCR-LKVDVVSYNVLITGLCKDKH 975

Query: 465  AEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
              D A+ L+G +   G  P   ++  L   +    ++    ELL++  I+E G I
Sbjct: 976  ISD-ALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLED--IEERGLI 1027



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 193/433 (44%), Gaps = 40/433 (9%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
           ATY T++D   R ++ +   +VL +M        E  +  L+  +   S+    L++   
Sbjct: 295 ATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVD 354

Query: 156 IHPITREKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
           +   +R     K + T L +   +  ++  A+  LK S     + P+   ++ LI   C+
Sbjct: 355 LK--SRGITINKTMCTILIDGFCQVGEISKAKQILK-SMLEDGIDPDVVTYSALINGMCR 411

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI---------------- 258
              +    E+L  M+KS +  PN + Y+TLI   CK G  + A+                
Sbjct: 412 MAKMHETKEILSRMQKSGI-LPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPV 470

Query: 259 ------------------ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
                             E F + +S+  I  +++++N +ID +C  GK+  A  + + M
Sbjct: 471 IHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDM 530

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G +PNV  Y  L+ G C+ G L +AK+    + +     D   +  L+   C+ G +
Sbjct: 531 VRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTL 590

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEAL++ ++M +  C  DI T+ I+L G CR+GKI  AL ML+ +   G+  +  +Y  +
Sbjct: 591 DEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCL 650

Query: 421 LNFSCQKGELEKAIELLRLMLCR-GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           LN    +G+++ A  + + ++C+ G        N L+    K G        +  + +  
Sbjct: 651 LNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNE 710

Query: 480 FKPESDSWALLVE 492
             P S S+ +L+ 
Sbjct: 711 VYPNSASYNILMH 723



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 147/277 (53%), Gaps = 9/277 (3%)

Query: 176  LIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
            L E   +D+A  FL    + + L+   P+  +F+ILI    ++  + +A  +   MK   
Sbjct: 760  LSECGLIDIAVKFL----EKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLH 815

Query: 233  MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            +S P+  T+S +I+GL +     ++ E+  EM+ +  + P+   Y  L++  CR G++DR
Sbjct: 816  LS-PSSKTFSAMINGLIRKNYLDQSHEVLHEML-QVGLQPNHTHYIALVNAKCRVGEIDR 873

Query: 293  AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
            A ++ E MK  G  P     ++++ G C+ GKL+EA  VF  M    + P    +TTL++
Sbjct: 874  AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMH 933

Query: 353  CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
              C+  ++ +AL L + M+    K D+V++N+++ GLC++  I +AL +  ++   G++ 
Sbjct: 934  SLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWP 993

Query: 413  NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            N  +Y  +       G ++   ELL  +  RG +P +
Sbjct: 994  NVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAF 1030



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 146/312 (46%), Gaps = 5/312 (1%)

Query: 201 NTCIFNILIKHHCK-RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           N  +F +LIK + K R  L++A  V         + P  +  ++++  L + G  +    
Sbjct: 84  NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASP--VACNSILKALVEEGESKYVWL 141

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              E +++   L D  T N+L++  C  G+  +A+ +++ MK+  C  N   Y T+++ +
Sbjct: 142 FLRESLARKFPL-DVTTCNILLNSLCTNGEFRKAEDMLQKMKS-CCLSNSATYNTILHWY 199

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K+G+ + A  V ++M+   ++ D   Y  +I+  CR  R   A  LLK M++     D 
Sbjct: 200 VKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDE 259

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N ++ G   EGKI  A  +   +    +  + A+Y  +++  C+   ++KA+ +L  
Sbjct: 260 CTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSE 319

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M   G +P   T + LL   CK  M   A   +  L   G         +L++  C+  +
Sbjct: 320 MEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGE 379

Query: 500 LLFAFELLDELV 511
           +  A ++L  ++
Sbjct: 380 ISKAKQILKSML 391



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 7/241 (2%)

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           + + +LI  + +  KV  A   + FM + G   +     +++    +EG   E+K V+  
Sbjct: 86  VVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEG---ESKYVWLF 142

Query: 335 MKNFLLKPDTIGYTT---LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           ++  L +   +  TT   L+N  C  G   +A ++L++MK   C ++  T+N IL    +
Sbjct: 143 LRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKS-CCLSNSATYNTILHWYVK 201

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +G+ + AL +LE +  D I  +  +Y I+++  C+     +A  LL+ M      P   T
Sbjct: 202 KGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECT 261

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+      G    A      ++     P   ++  +++  CR R++  A  +L E+ 
Sbjct: 262 YNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEME 321

Query: 512 I 512
           I
Sbjct: 322 I 322


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 220/425 (51%), Gaps = 5/425 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +  TY T++  L    + +    ++ +M     + +  ++ +L++ +      E V
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            ++F ++     E P +   +  ++ L +  +   A   +    +   L+PN   +N+LI
Sbjct: 205 GKVFVEMSEKGIE-PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR-GLEPNVVTYNVLI 262

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV-SKD 268
              CK G+++ A  VLK+M +  ++ P+++TY+TLI GL       EA+ L EEMV  K+
Sbjct: 263 NCMCKEGSVKEAIGVLKKMSEKGVA-PDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKN 321

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + P+ +T+N +I G C  G++ +A ++   M+  GC  N+  Y  L+ G  +  K+++A
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKA 381

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
            E+ DEM +  L+PD+  Y+ LI  FC+  +VD A +LL  M++RG + ++  +  +L  
Sbjct: 382 MELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVA 441

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           +C +G +E A  +  ++  +   L+  +Y  +++ +C+ G+L+ A ELL+ ++  G  P 
Sbjct: 442 MCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPD 500

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T + ++    K+G  E A   L  +   GF P+   +  L++      ++    EL+ 
Sbjct: 501 AVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIR 560

Query: 509 ELVIK 513
           E++ K
Sbjct: 561 EMITK 565



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 176/338 (52%), Gaps = 22/338 (6%)

Query: 193 NQHLRLKP---------------NTCIFNILIKHHCKRGTLESAFEVLKEM--KKSQMSY 235
           N+HLRL P               +   +N ++   C+RG  + A  +L+ M  +      
Sbjct: 53  NRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACR 112

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN ++Y+ L+  LC +    +A+ L   M S   +  D +TY  LI G C   +VD+A +
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAG-VRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +M  M  +G  PNV  Y++L+ G+CK G+ ++  +VF EM    ++PD + YT LI+  C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+  +A  ++  M  RG + ++VT+N+++  +C+EG ++EA+G+L+K+   G+  +  
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRG---FLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +Y  ++       E+++A+ LL  M+ RG     P+  T N ++  LC  G    A    
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             + E G      ++ LL+  + R  K+  A EL+DE+
Sbjct: 351 AMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 182/377 (48%), Gaps = 55/377 (14%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           ++F  +SE KG   +   Y  ++D L +  K +    V+  M         G+  N++ +
Sbjct: 206 KVFVEMSE-KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV------RRGLEPNVVTY 258

Query: 140 --FSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
               NC   E  ++    +     EK   P +   +T +  L +  ++D A   L+   +
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE---E 315

Query: 195 HLR----LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
            +R    +KPN   FN +I+  C  G +  AF+V + M +      NL+TY+ LI GL +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP--- 307
             + R+A+EL +EM S   + PD+ TY++LI GFC+  +VDRA+ ++  M++ G  P   
Sbjct: 375 VHKVRKAMELMDEMTSLG-LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 308 -------------------NVFN------------YTTLMNGFCKEGKLQEAKEVFDEMK 336
                              N+FN            Y+T+++G CK G L+ AKE+   + 
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           +  L PD + Y+ +IN F ++G ++ A  +LK+M   G   D+  F+ ++ G   +G+I 
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEIN 553

Query: 397 EALGMLEKLWYDGIYLN 413
           + L ++ ++    I L+
Sbjct: 554 KVLELIREMITKNIALD 570



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 136/259 (52%), Gaps = 7/259 (2%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK---NNGCNPNVFNY 312
           EA  L + + S    + DA++YN ++   CR G  DRA  ++  M    +  C PN  +Y
Sbjct: 63  EATSLLDALPS----VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
           T LM   C +    +A  +   M++  ++ D + Y TLI   C A  VD+A+EL+ EM E
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G + ++V ++ +L G C+ G+ E+   +  ++   GI  +   Y  +++  C+ G+ +K
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKK 238

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A  ++ +M+ RG  P+  T N L+  +CK G  ++A   L  + E G  P+  ++  L++
Sbjct: 239 AHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIK 298

Query: 493 LICRGRKLLFAFELLDELV 511
            +    ++  A  LL+E+V
Sbjct: 299 GLSDVLEMDEAMWLLEEMV 317


>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1056

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 194/376 (51%), Gaps = 9/376 (2%)

Query: 66  ISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET 125
           + LI  +K    ALE F   S   GF H+ +TY  +  KL  +++F+ V  +L +M   T
Sbjct: 35  VRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFYKLCVFRRFDTVYQLLDEMPEST 94

Query: 126 -CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
                + IF+ +++ F    L +RV+ +   +      KPSLK  ++ L++L++ + +D+
Sbjct: 95  GLPPDDAIFVTIIRGFGRARLTKRVISVVDLVSKFGI-KPSLKVFNSILDVLVKED-IDI 152

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A+ F +       ++ +   + IL+K  C    +   F++L+ MK   ++ PN + Y+TL
Sbjct: 153 AREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGVA-PNTVVYNTL 211

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           +  LCKNG+   A  L  EM       P+ +T+N+LI  +C   K+ ++  ++E   + G
Sbjct: 212 LHALCKNGKVGRARSLMSEMKE-----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLG 266

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             P+V   T +M   C EG++ EA EV + +++   K D +   TL+  +C  G++  A 
Sbjct: 267 LVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQ 326

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
              +EM+ +G   ++ T+N+++ G C  G ++ AL     +  D I  N A++  ++   
Sbjct: 327 RFFQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 386

Query: 425 CQKGELEKAIELLRLM 440
             +G  +  I++L LM
Sbjct: 387 SVRGRTDDGIKILELM 402



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 134/271 (49%), Gaps = 6/271 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+  IF  +I+   +    +    V+  + K  +  P+L  +++++D L K      A
Sbjct: 96  LPPDDAIFVTIIRGFGRARLTKRVISVVDLVSKFGIK-PSLKVFNSILDVLVKED-IDIA 153

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            E F   +    I  D  TY +L+ G C   ++    K+++ MK  G  PN   Y TL++
Sbjct: 154 REFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGVAPNTVVYNTLLH 213

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK GK+  A+ +  EMK    +P+ + +  LI+ +C   ++ +++ LL++    G   
Sbjct: 214 ALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGLVP 269

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+VT   ++  LC EG++ EAL +LE++   G  ++  +   ++   C  G++  A    
Sbjct: 270 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFF 329

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           + M  +G+LP+  T N L+   C  GM + A
Sbjct: 330 QEMERKGYLPNVETYNLLIAGFCDVGMLDSA 360



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 137/275 (49%), Gaps = 7/275 (2%)

Query: 184 LAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
           +AQ F +   +   L PN   +N+LI   C  G L+SA +   +MK   + + N  T++T
Sbjct: 324 VAQRFFQEMERKGYL-PNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRW-NFATFNT 381

Query: 244 LIDGLCKNGRFREAIELFEEMVSKDQILPDALT-YNVLIDGFCRGGKVDRAKKIMEFM-K 301
           LI GL   GR  + I++ E M   + +    +  YN +I GF    K +R +  +EF+ K
Sbjct: 382 LIRGLSVRGRTDDGIKILELMQDSETVHGARIDPYNSVIYGFY---KENRWEDALEFLLK 438

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                P   + +  +   C++G + + K  +D+M      P  I    LI+ + + G ++
Sbjct: 439 MEKLFPRAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYME 498

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           E LEL+ +M  RG      TFN ++ G C+E K+   +  +E +   G   ++ SY  +L
Sbjct: 499 ETLELINDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLL 558

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
              C KG+++KA  LL LM+ +  +P  +  + L+
Sbjct: 559 EELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLM 593



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 7/279 (2%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            ++ +++L EM +S    P+   + T+I G  +  R  + +    ++VSK  I P    +
Sbjct: 80  FDTVYQLLDEMPESTGLPPDDAIFVTIIRGFGR-ARLTKRVISVVDLVSKFGIKPSLKVF 138

Query: 278 NVLIDGFCRGGKVDRAKKIMEF-MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           N ++D   +   +D A++     M  +G   + + Y  LM G C   ++ +  ++   MK
Sbjct: 139 NSILDVLVKE-DIDIAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMK 197

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              + P+T+ Y TL++  C+ G+V  A  L+ EMKE     + VTFNI++   C E K+ 
Sbjct: 198 TCGVAPNTVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLI 253

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +++ +LEK +  G+  +  +   V+   C +G + +A+E+L  +  +G        N L+
Sbjct: 254 QSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLV 313

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
              C  G    A      +   G+ P  +++ LL+   C
Sbjct: 314 KGYCAVGKMRVAQRFFQEMERKGYLPNVETYNLLIAGFC 352


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 240/525 (45%), Gaps = 61/525 (11%)

Query: 38  PKADPPVE---TSDTCVDARKRSRFIS----------HGAAISLIKCEKEPQCALEIFNT 84
           PK  PP++   T+   +D  +  R+ S          H     LI  +     AL+ F  
Sbjct: 2   PKLFPPLKLKATASKLLDIFQFRRYSSSSTPSLSVPSHQHIAHLILDQNSATKALQTFKW 61

Query: 85  VSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET-CKFHEGIFLNLMKHFSNC 143
            S    F H+ +TY  ++ KL  + +F+ V  +L +M +       E IFL +++     
Sbjct: 62  ASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRA 121

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
            +   V+++   I    +  PSLK  ++ L++L++ + +D+A+ F +       ++ +  
Sbjct: 122 RMIPHVIKVLDLISKFGK-NPSLKIFNSILDVLVKVD-IDVAREFYRKQMMGSGVQGDDY 179

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            F IL+K  C    +   F +L+ M KS+   PN + Y+TL+  LCKNG+   A  L +E
Sbjct: 180 TFAILMKGLCLTNRIGDGFRLLQVM-KSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDE 238

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           +       P+ +T+NVLI  +C+   + +A  ++E   + G  P+V   T ++   C  G
Sbjct: 239 IEE-----PNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAG 293

Query: 324 KLQEAKEVFD--EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           ++ EA E+ +  E K  L+  D + Y TL+  FCR G++  A   LKEM+ +GC  ++ T
Sbjct: 294 RVTEAVEMLERVEYKGGLV--DVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVET 351

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM- 440
           +NI++ G C  G  + AL M   +  DGI  N  +Y  ++      G +E+ +++L LM 
Sbjct: 352 YNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELME 411

Query: 441 ---------------LCRG-------------------FLPHYATSNELLVRLCKAGMAE 466
                          +  G                     P     +  ++  C+ G  +
Sbjct: 412 ESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVK 471

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +A +    ++  G  P    +  LV   C+   L  AFEL++E+V
Sbjct: 472 NAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMV 516



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 243/551 (44%), Gaps = 74/551 (13%)

Query: 2   NSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFIS 61
           ++ R  ++K C F  F T    L  +        +   + P  E   T +    R+R I 
Sbjct: 73  STYRALIQKLCAFHRFDTVYQLLDEM-------PHAIGSPPDEEIFLTVIRGLGRARMIP 125

Query: 62  HGAAI-SLI-KCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           H   +  LI K  K P  +L+IFN+                ILD L +     A +   +
Sbjct: 126 HVIKVLDLISKFGKNP--SLKIFNS----------------ILDVLVKVDIDVAREFYRK 167

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLI 177
           QM     +  +  F  LMK      L  R+ + F  +  +     KP+    +T L+ L 
Sbjct: 168 QMMGSGVQGDDYTFAILMK---GLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALC 224

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           ++ +V  A++ +    +     PN   FN+LI  +CK   L  A  VL E   S    P+
Sbjct: 225 KNGKVGRARSLMDEIEE-----PNDVTFNVLIAAYCKEENLVQAL-VLLEKSFSLGFVPD 278

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++T + +++ LC  GR  EA+E+ E +  K  ++ D + YN L+ GFCR GK+  A + +
Sbjct: 279 VVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLV-DVVAYNTLLRGFCRLGKIKVAHRFL 337

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           + M+  GC PNV  Y  L++GFC  G    A ++F++MK   +  +   Y TLI      
Sbjct: 338 KEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFG 397

Query: 358 GRVDEALELLKEMKER--GCKADIVTFNIILGGL-------------------------- 389
           GR++E L++L+ M+E   G    I  +N +L GL                          
Sbjct: 398 GRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDR 457

Query: 390 -------CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
                  C +G ++ A  + +++  +G   N   Y  +++  CQ+G L +A EL+  M+ 
Sbjct: 458 SLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVG 517

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G+    +  N L+   C  G  E A   L  +V  G  P+  +++ L++ +CR      
Sbjct: 518 HGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQK 577

Query: 503 AFELLDELVIK 513
           A  + ++++ K
Sbjct: 578 ALSIFNQMIEK 588



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 37/296 (12%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +   +N L++  C+ G ++ A   LKEM++ +   PN+ TY+ LI G C +G F  A+++
Sbjct: 313 DVVAYNTLLRGFCRLGKIKVAHRFLKEMER-KGCLPNVETYNILISGFCDSGMFDMALDM 371

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN--GCNPNVFNYTTLMNG 318
           F +M   D I  +  TY+ LI G   GG+++   KI+E M+ +  G    +  Y +++ G
Sbjct: 372 FNDM-KTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYG 430

Query: 319 ---------------------------------FCKEGKLQEAKEVFDEMKNFLLKPDTI 345
                                            FC++G ++ AK VFD+M N    P+ +
Sbjct: 431 LYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNIL 490

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  L++ FC+ G + EA EL+ EM   G       FN ++ G C +GK E AL +L+ +
Sbjct: 491 VYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDM 550

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
              G   ++ +Y  +++  C+KG  +KA+ +   M+ +G  P  +T N LL+RL K
Sbjct: 551 VGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSK 606



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 19/322 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+E+   V E KG   +   Y T+L    R  K +     L++M  + C  +   +  L+
Sbjct: 298 AVEMLERV-EYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILI 356

Query: 138 KHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
             F +  + +  L+MF+  K   I+    +     T +  L    +++     L+   + 
Sbjct: 357 SGFCDSGMFDMALDMFNDMKTDGISW---NFDTYDTLIKGLFFGGRIEEGLKILELMEES 413

Query: 196 L-----RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
                 R+ P    +N ++    K+   + A E L +M+K    +P  +  S  I G C+
Sbjct: 414 KGGSGGRISP----YNSVLYGLYKKNMWDEALEFLMKMEKL---FPRAVDRSLRILGFCE 466

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G  + A  +F++M+++    P+ L Y+ L+ GFC+ G +  A ++M  M  +G      
Sbjct: 467 KGAVKNAKMVFDQMINEGGT-PNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVAS 525

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            +  L++GFC +GK + A ++ D+M      PD   Y+ LI+  CR G   +AL +  +M
Sbjct: 526 GFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQM 585

Query: 371 KERGCKADIVTFNIILGGLCRE 392
            E+G   D  T+N +L  L +E
Sbjct: 586 IEKGITPDSSTWNSLLIRLSKE 607



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 4/145 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN  +++ L+   C+ G L  AFE++ EM      +     ++ LI G C  G+   A++
Sbjct: 487 PNILVYDCLVHGFCQEGNLREAFELMNEMV-GHGYFLVASGFNALIHGFCGQGKDESALK 545

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L ++MV +  + PD  TY+ LID  CR G   +A  I   M   G  P+   + +L+   
Sbjct: 546 LLDDMVGRGCV-PDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRL 604

Query: 320 CKEGKLQEAKEVFDEMKN--FLLKP 342
            KE    E K VF   K   +++KP
Sbjct: 605 SKEIIWLENKNVFHVNKQLEWIIKP 629


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 218/487 (44%), Gaps = 42/487 (8%)

Query: 65  AISLIKCEKEPQCALEIFN-TVSEQKG---FNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           A S   C   P  A+ +FN   S  +G    +  + TYA ++D   R  + E   A   Q
Sbjct: 79  APSSAACGSGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQ 138

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
           +     +    I  +L+K F      +  L++     P     P + + +  L  L    
Sbjct: 139 LLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQG 198

Query: 181 QVDLAQNFLKYSNQHLRL-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           +   A + L+   +   +  P+   +N +I    K G +  A ++ KEM +  +  P+L+
Sbjct: 199 KSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP-PDLV 257

Query: 240 TYSTLIDGLCK-----------------------------------NGRFREAIELFEEM 264
           TYS+++  LCK                                    G+++EA+ +F+EM
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  ILPD +  N L+   C+ GK+  A+ + + M   G NP+VF+YT ++NG+  +G 
Sbjct: 318 -RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L +  ++FD M    + P    +  LI  +   G +D+A+ +  EM++ G K  +VT+  
Sbjct: 377 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++  LCR GK+++A+    ++   G+  +K +Y  ++   C  G L KA EL+  ++  G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
                     ++  LCK G   DA       V +G  P++  + +L++  C   K+  A 
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556

Query: 505 ELLDELV 511
            + D +V
Sbjct: 557 RVFDAMV 563



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 218/475 (45%), Gaps = 76/475 (16%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+G   +  TY++++  L + +  +  +A LRQM  +        + NL+  +S+    +
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 308

Query: 148 RVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNF-----LKYSNQHL---- 196
             + +F ++    R+   P + A++T +  L +  ++  A++      +K  N  +    
Sbjct: 309 EAVRVFKEMR---RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365

Query: 197 -------------------------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     + P  C FN+LIK +   G L+ A  +  EM+  
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 425

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
            +  P+++TY T+I  LC+ G+  +A+E F +M+ +  ++PD   Y+ LI GFC  G + 
Sbjct: 426 GVK-PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG-VVPDKYAYHCLIQGFCTHGSLL 483

Query: 292 RAKKIMEFMKNNG-----------------------------------CNPNVFNYTTLM 316
           +AK+++  + NNG                                    +P+   Y  LM
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+C  GK+++A  VFD M +  ++P+ +GY TL+N +C+ GR+DE L L +EM ++G K
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
              + +NII+ GL   G+   A     ++   GI +NK +Y IVL    +    ++AI L
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            + +          T N ++  + +    E+A      +   G  P + ++++++
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 174/363 (47%), Gaps = 36/363 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P L   S+ ++ L ++  +D A+ FL+       L P+   +N LI  +   G  + A  
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL-PDNWTYNNLIYGYSSTGQWKEAVR 312

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK---------------- 267
           V KEM++ Q   P+++  +TL+  LCK G+ +EA ++F+ M  K                
Sbjct: 313 VFKEMRR-QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGY 371

Query: 268 ------------------DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
                             D I P   T+NVLI  +   G +D+A  I   M+++G  P+V
Sbjct: 372 ATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHV 431

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y T++   C+ GK+ +A E F++M +  + PD   Y  LI  FC  G + +A EL+ E
Sbjct: 432 VTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISE 491

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           +   G + DIV F  I+  LC+ G++ +A  + +     G++ +   Y ++++  C  G+
Sbjct: 492 IMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 551

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +EKA+ +   M+  G  P+      L+   CK G  ++       +++ G KP +  + +
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611

Query: 490 LVE 492
           +++
Sbjct: 612 IID 614



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 211/410 (51%), Gaps = 11/410 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++F+T++  KG N +  +Y  +L+  A       +  +   M  +        F  L+
Sbjct: 345 ARDVFDTMA-MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 403

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLA-QNFLKYSNQ 194
           K ++NC + ++ + +F+++  H +   KP +    T +  L    ++D A + F +  +Q
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGV---KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            +   P+   ++ LI+  C  G+L  A E++ E+  + M   +++ + ++I+ LCK GR 
Sbjct: 461 GV--VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL-DIVFFGSIINNLCKLGRV 517

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +A  +F+  V+   + PDA+ YN+L+DG+C  GK+++A ++ + M + G  PNV  Y T
Sbjct: 518 MDAQNIFDLTVNVG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G++ E   +F EM    +KP TI Y  +I+    AGR   A     EM E G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +  T++I+L GL +    +EA+ + ++L    + ++  +   ++    Q   +E+A 
Sbjct: 637 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 696

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           +L   +   G +P   T + ++  L K G+ E+A      +   G +P+S
Sbjct: 697 DLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 746



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 170/397 (42%), Gaps = 44/397 (11%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IFN + +  G   +  TY T++  L R  K +       QM  +     +  +  L+
Sbjct: 415 AMIIFNEMRDH-GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAI--STCLNLLIESNQVDLAQNFLKYSNQH 195
           + F  C+ H  +L+    I  I      L  +   + +N L +  +V  AQN    +  +
Sbjct: 474 QGF--CT-HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT-VN 529

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + L P+  ++N+L+  +C  G +E A  V   M  + +  PN++ Y TL++G CK GR  
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE-PNVVGYGTLVNGYCKIGRID 588

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT-- 313
           E + LF EM+ K  I P  + YN++IDG    G+   AK     M  +G   N   Y+  
Sbjct: 589 EGLSLFREMLQKG-IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 314 ---------------------------------TLMNGFCKEGKLQEAKEVFDEMKNFLL 340
                                            T++ G  +  +++EAK++F  +    L
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P  + Y+ +I    + G V+EA ++   M+  GC+ D    N ++  L ++ +I  A  
Sbjct: 708 VPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 767

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            L K+      L   +  ++++    KG   + I  L
Sbjct: 768 YLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF    S+ Q    + P + TY +L+D   R  + + A      +   G   +    
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 313 TTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           + L+ GFC+  +  EA ++           PD   Y  L+   C  G+  +A +LL+ M 
Sbjct: 152 SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211

Query: 372 ERG--CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           E G  C  D+V +N ++ G  +EG + +A  + +++   GI  +  +Y  V++  C+   
Sbjct: 212 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 271

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           ++KA   LR M+ +G LP   T N L+      G  ++A      +      P+  +   
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L+  +C+  K+  A ++ D + +K
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMK 355


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 207/435 (47%), Gaps = 59/435 (13%)

Query: 139 HFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSN-Q 194
           +F+ C       +M  +I  +   K   P     S  +  L E+ +V+ A  FL +   +
Sbjct: 258 NFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKA--FLLFQEMK 315

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK-----SQMSY-------------- 235
            + + P+   + ILI   CK G +E A     EM+      + ++Y              
Sbjct: 316 SVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLP 375

Query: 236 ---------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSK------------- 267
                          PN ITYS L+DGLCK G  ++A E++ +++               
Sbjct: 376 QASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGK 435

Query: 268 --DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
             D I P+ +TY  LIDG C+  KV  A+++++ M +NGC PN   Y  L++GFCK GK+
Sbjct: 436 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKI 495

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A+EVF  M      P    YT+LI+   +  R+D A+++L +M E  C  ++VT+  +
Sbjct: 496 DNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAM 555

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLCR G+ ++AL +L  +   G   N  +Y  +++   + G+++ +++L   M  +G 
Sbjct: 556 IDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGC 615

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+Y T   L+   C AG+ ++A   L  + +  +      +  +V+     +K + +  
Sbjct: 616 APNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLG 673

Query: 506 LLDELVIKESGTIQV 520
           LL+EL  +  GT+ +
Sbjct: 674 LLEEL--ESHGTVPI 686



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 216/444 (48%), Gaps = 32/444 (7%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF  + +TY+ ++  L    K E    + ++M           +  L+  F    L E+
Sbjct: 282 KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQ 341

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFN 206
               F ++  I     ++   +  L+  +++ Q+  A +     N+ +     PNT  ++
Sbjct: 342 ARSWFDEMRSIGCS-ANVVTYTALLHAYLKAKQLPQASDIF---NRMIDAGCPPNTITYS 397

Query: 207 ILIKHHCKRGTLESAFEVLK---------------EMKKSQMSYPNLITYSTLIDGLCKN 251
            L+   CK G ++ A EV                 E K +    PN++TY  LIDGLCK 
Sbjct: 398 ALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKA 457

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +  +A EL + M+S +   P+ + Y+ LIDGFC+ GK+D A+++   M   G  P V  
Sbjct: 458 HKVVDAQELLDAMLS-NGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHT 516

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           YT+L++   K+ +L  A +V  +M      P+ + YT +I+  CR G   +AL+LL  M+
Sbjct: 517 YTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 576

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           E+GC  ++VT+  ++ GL + GK++ +L +  ++   G   N  +YR+++N  C  G L+
Sbjct: 577 EKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLD 636

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE----MGFKPESDSW 487
           +A  LL  M  + + P Y      +V+    G ++   IA  GL+E     G  P +  +
Sbjct: 637 EAHSLLSEMK-QTYWPKYLQGYCSVVQ----GFSKK-FIASLGLLEELESHGTVPIAPVY 690

Query: 488 ALLVELICRGRKLLFAFELLDELV 511
            LL++   +  +L  A EL  E++
Sbjct: 691 GLLIDNFSKAGRLEEALELHKEMM 714



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 170/334 (50%), Gaps = 24/334 (7%)

Query: 200 PNTCIFNILIKHHCKRGTLES------AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           P    +NI I   C    L S      A +V +EM  S     N +  +     LC  G+
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVL-NKVNTANFARCLCGMGK 268

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F  A ++ + M+ K   +PD  TY+ +I   C   KV++A  + + MK+ G NP+V+ YT
Sbjct: 269 FDMAFQIIKVMMGKG-FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++ FCK G +++A+  FDEM++     + + YT L++ + +A ++ +A ++   M + 
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKL----------WY------DGIYLNKASY 417
           GC  + +T++ ++ GLC+ G+I++A  +  KL          +Y      D I  N  +Y
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             +++  C+  ++  A ELL  ML  G  P++   + L+   CK G  ++A      + +
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G+ P   ++  L++ + + R+L  A ++L ++V
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMV 541



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 204/436 (46%), Gaps = 26/436 (5%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY T+L    + K+      ++  M  E C  +  +F +L+  + N   +    ++ 
Sbjct: 141 NVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 200

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH- 212
            ++       P   A +  +  +    ++            +  +  ++C+ N +   + 
Sbjct: 201 KRMADCGC-PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANF 259

Query: 213 ----CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
               C  G  + AF+++K M       P+  TYS +I  LC+  +  +A  LF+EM S  
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGF-VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVG 318

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + PD  TY +LID FC+ G +++A+   + M++ GC+ NV  YT L++ + K  +L +A
Sbjct: 319 -VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQA 377

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM----------------KE 372
            ++F+ M +    P+TI Y+ L++  C+AG + +A E+  ++                  
Sbjct: 378 SDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHT 437

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
                ++VT+  ++ GLC+  K+ +A  +L+ +  +G   N   Y  +++  C+ G+++ 
Sbjct: 438 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDN 497

Query: 433 AIEL-LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           A E+ LR+  C G+LP   T   L+  + K    + A   L  +VE    P   ++  ++
Sbjct: 498 AQEVFLRMSKC-GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMI 556

Query: 492 ELICRGRKLLFAFELL 507
           + +CR  +   A +LL
Sbjct: 557 DGLCRIGECQKALKLL 572



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 150/318 (47%), Gaps = 11/318 (3%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N L++     G ++  F V KEM +S        T       LCK GR+ +A+
Sbjct: 37  RPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKF-TVGCFAQALCKEGRWSDAL 95

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
                M+ ++    D +    +I G       D A   +  M+ N C PNV  Y TL+ G
Sbjct: 96  V----MIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTG 151

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           F K+ +L   K + + M      P+   + +L++ +C A     A +LLK M + GC   
Sbjct: 152 FLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPG 211

Query: 379 IVTFNIILGGLC--REGKIEEALGMLEKLWYDGI----YLNKASYRIVLNFSCQKGELEK 432
            V +NI +G +C   E    + L + EK++ + +     LNK +        C  G+ + 
Sbjct: 212 YVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDM 271

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A +++++M+ +GF+P  +T ++++  LC+A   E A +    +  +G  P+  ++ +L++
Sbjct: 272 AFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILID 331

Query: 493 LICRGRKLLFAFELLDEL 510
             C+   +  A    DE+
Sbjct: 332 SFCKAGLIEQARSWFDEM 349



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 158/353 (44%), Gaps = 40/353 (11%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++D L +  K      +L  M    C+ +  I+  L+  F      +   E+F
Sbjct: 443 NVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF 502

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            ++       P++   ++ ++ + +  ++DLA   L    +     PN   +  +I   C
Sbjct: 503 LRMSKCGY-LPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES-SCTPNVVTYTAMIDGLC 560

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           + G  + A ++L  M++   S PN++TY+ LIDGL K+G+   +++LF +M +K    P+
Sbjct: 561 RIGECQKALKLLSMMEEKGCS-PNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG-CAPN 618

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMK-------------------------------- 301
            +TY VLI+  C  G +D A  ++  MK                                
Sbjct: 619 YVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEEL 678

Query: 302 -NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG---YTTLINCFCRA 357
            ++G  P    Y  L++ F K G+L+EA E+  EM       +      YT+LI   C A
Sbjct: 679 ESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLA 738

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            ++++A EL  E+  +G   ++  F  ++ GL +  K  EAL +   +  +G+
Sbjct: 739 SQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 3/177 (1%)

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           E+K+F  +P    Y  L+     AG++D    + KEM E G   D  T       LC+EG
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           +  +AL M+E+   +   L+      +++   +    ++AI  L  M C   +P+  T  
Sbjct: 90  RWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LL    K          +  +++ G  P    +  LV   C  R   +A++LL  +
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRM 203



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 16/239 (6%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E Q AL++ + + E+KG + N  TY  ++D L +  K +    +  QM+ + C  +   +
Sbjct: 564 ECQKALKLLSMM-EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTY 622

Query: 134 LNLMKHFSNCSL----HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL 189
             L+ H     L    H  + EM     P   +         C  +   S +   +   L
Sbjct: 623 RVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQ-------GYCSVVQGFSKKFIASLGLL 675

Query: 190 KYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK--SQMSYPNLITYSTLIDG 247
           +    H  + P   ++ +LI +  K G LE A E+ KEM +  S ++  +   Y++LI  
Sbjct: 676 EELESHGTV-PIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQA 734

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           LC   +  +A EL+ E +++  ++P+   +  LI G  +  K + A ++   + + G N
Sbjct: 735 LCLASQLEKAFELYSE-ITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVN 792


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 171/337 (50%), Gaps = 39/337 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN-GRFRE 256
           L PN  ++N ++   CKRG +  A  +L EM    +  PN++TY+ LI GLC   G +RE
Sbjct: 211 LGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVE-PNVVTYNCLIQGLCGEFGGWRE 269

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
            + LF EMV++  I+PD  T+++L+DGFC+ G + RA+ ++ FM   G  PNV  Y +L+
Sbjct: 270 GVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLI 329

Query: 317 NGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            G+C   +++EA  VF  M  +     P  + + +LI+ +C+   VD+A+ LL EM  +G
Sbjct: 330 AGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKG 389

Query: 375 CKADIVTFNIILGGLCR----------------EGKIEE------ALGMLEKLWYD---- 408
              D+ T+  ++GG C                  G++         L  L K W D    
Sbjct: 390 LDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAV 449

Query: 409 ---------GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
                    G+ L+   Y I+L+  C+ G+L  A +LL  +L +G      T N ++  L
Sbjct: 450 TLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGL 509

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           C+ G+ +DA   L  + E G  P   S+ + V+ + R
Sbjct: 510 CREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLR 546



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 185/373 (49%), Gaps = 12/373 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G++ N  TY  +++ L +          L++M       +  ++  ++       L 
Sbjct: 172 ENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLV 231

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYSNQHLRLK---PN 201
              L + H++  +  E P++       N LI+    +    +  +   N+ +  K   P+
Sbjct: 232 GEALGLLHEMGVVNVE-PNV----VTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPD 286

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              F+IL+   CK G L  A  V+  M +  +  PN++TY++LI G C   +  EA+ +F
Sbjct: 287 VQTFSILVDGFCKEGLLLRAESVVGFMVRIGVE-PNVVTYNSLIAGYCLRSQMEEAMRVF 345

Query: 262 EEMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
             MV + +  LP  +T+N LI G+C+  +VD+A  ++  M   G +P+VF +T+L+ GFC
Sbjct: 346 GLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFC 405

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +  K   A+E+F  MK     P+      +++   +     EA+ L + M + G   DIV
Sbjct: 406 EVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIV 465

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +NI+L G+C+ GK+ +A  +L  +   G+ ++  +Y I++   C++G L+ A ELLR M
Sbjct: 466 IYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKM 525

Query: 441 LCRGFLPHYATSN 453
              G  P+  + N
Sbjct: 526 KENGCPPNKCSYN 538



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 191/386 (49%), Gaps = 11/386 (2%)

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           I +N + H    +L   VL +  KI      +P+L  ++T +N L     V+ A  +L  
Sbjct: 115 IAINCLCHMRKTTLGFAVLGLMTKIG----LEPTLVTLNTIVNGLCIEGDVNHAL-WLVE 169

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
             ++L    N   +  L+   CK G    A E LK+M K  +  PN++ Y+ ++DGLCK 
Sbjct: 170 KMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLG-PNVVVYNAILDGLCKR 228

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR--GGKVDRAKKIMEFMKNNGCNPNV 309
           G   EA+ L  EM     + P+ +TYN LI G C   GG  +      E +   G  P+V
Sbjct: 229 GLVGEALGLLHEM-GVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDV 287

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             ++ L++GFCKEG L  A+ V   M    ++P+ + Y +LI  +C   +++EA+ +   
Sbjct: 288 QTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGL 347

Query: 370 M--KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
           M  +  GC   +VT N ++ G C+  ++++A+ +L ++   G+  +  ++  ++   C+ 
Sbjct: 348 MVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEV 407

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
            +   A EL   M   G +P+  T   +L  L K  +  +A      +++ G   +   +
Sbjct: 408 KKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIY 467

Query: 488 ALLVELICRGRKLLFAFELLDELVIK 513
            ++++ +C+  KL  A +LL  +++K
Sbjct: 468 NIMLDGMCKMGKLNDARKLLSCVLVK 493



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 2/263 (0%)

Query: 235 YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
           +P +  ++ L   + K+  +  AI L + + S      D  T N+ I+  C   K     
Sbjct: 71  FPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGF 130

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
            ++  M   G  P +    T++NG C EG +  A  + ++M+N     +   Y  L+N  
Sbjct: 131 AVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGL 190

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G    ALE LK+M +R    ++V +N IL GLC+ G + EALG+L ++    +  N 
Sbjct: 191 CKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNV 250

Query: 415 ASYRIVLNFSCQK-GELEKAIELLRLMLC-RGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
            +Y  ++   C + G   + + L   M+  +G +P   T + L+   CK G+   A   +
Sbjct: 251 VTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVV 310

Query: 473 FGLVEMGFKPESDSWALLVELIC 495
             +V +G +P   ++  L+   C
Sbjct: 311 GFMVRIGVEPNVVTYNSLIAGYC 333


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 213/434 (49%), Gaps = 5/434 (1%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
            CA E+ +++ ++ G   N  T   ++D+L + +K +   A+  QM Y+ C   E  F +
Sbjct: 394 DCAFELRDSM-QKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCS 452

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           L+         +   +++ K+        S+   S   N      + D  + +    NQ+
Sbjct: 453 LIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQN 512

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+  + N  +    K G  E    + +E+K S+   P+  +YS LI GL K G   
Sbjct: 513 C--SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK-SRRFVPDARSYSILIHGLIKAGFAN 569

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E  ELF  M  +  +L D   YN++IDGFC+ GKV++A +++E MK  G  P V  Y ++
Sbjct: 570 ETYELFYSMKEQGCVL-DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G  K  +L EA  +F+E K+  ++ + + Y++LI+ F + GR+DEA  +L+E+ ++G 
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             ++ T+N +L  L +  +I EAL   + +       N+ +Y I++N  C+  +  KA  
Sbjct: 689 TPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
             + M  +G  P   +   ++  L KAG   +A          G  P+S  +  ++E + 
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808

Query: 496 RGRKLLFAFELLDE 509
            G + + AF L +E
Sbjct: 809 NGNRAMDAFSLFEE 822



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 234/482 (48%), Gaps = 17/482 (3%)

Query: 39  KADPPVETSDTCVDARK---RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNN 95
           KA+   E  D   + RK   R  F ++   I            L +F  + E  G+    
Sbjct: 145 KANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL-GYEPTV 203

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
             + T++   A+  + ++  ++L +M   +      ++   +  F      +   + FH+
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           I      KP     ++ + +L ++N++D A    ++  ++ R+ P T  +N +I  +   
Sbjct: 264 IEA-NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSA 321

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
           G  + A+ +L E ++++ S P++I Y+ ++  L K G+  EA+ +FEEM  K    P+  
Sbjct: 322 GKFDEAYSLL-ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM--KKDAAPNLS 378

Query: 276 TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           TYN+LID  CR GK+D A ++ + M+  G  PNV     +++  CK  KL EA  +F++M
Sbjct: 379 TYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQM 438

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
              +  PD I + +LI+   + GRVD+A ++ ++M +  C+ + + +  ++      G+ 
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLN--FSC--QKGELEKAIELLRLMLCRGFLPHYAT 451
           E+      K++ D +  N +    +LN    C  + GE EK   +   +  R F+P   +
Sbjct: 499 EDG----HKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARS 554

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + L+  L KAG A +     + + E G   ++ ++ ++++  C+  K+  A++LL+E+ 
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614

Query: 512 IK 513
            K
Sbjct: 615 TK 616



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 207/434 (47%), Gaps = 14/434 (3%)

Query: 37  TPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNA 96
           T    P  E + + ++ + +  F+     I +++  K+   A+E F     +    H   
Sbjct: 45  TGAWGPSAENALSALNFKPQPEFV-----IGVLRRLKDVNRAIEYFRWYERRTELPHCPE 99

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           +Y ++L  +AR + F+A+D +L +M+     F   +    ++   +C    ++ E F  +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMS--VAGFGPSVN-TCIEMVLSCVKANKLREGFDVV 156

Query: 157 HPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
             + + K  P+  A +T +      N  D+     +   Q L  +P   +F  LI+   K
Sbjct: 157 QNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ-QMQELGYEPTVHLFTTLIRGFAK 215

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
            G ++SA  +L EMK S +   +++ Y+  ID   K G+   A + F E +  + + PD 
Sbjct: 216 EGRVDSALSLLDEMKSSSLD-ADIVLYNVCIDSFGKVGKVDMAWKFFHE-IEANGLKPDE 273

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           +TY  +I   C+  ++D A ++ E ++ N   P  + Y T++ G+   GK  EA  + + 
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
            +     P  I Y  ++ C  + G+VDEAL + +EMK +    ++ T+NI++  LCR GK
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGK 392

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           ++ A  + + +   G++ N  +  I+++  C+  +L++A  +   M  +   P   T   
Sbjct: 393 LDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCS 452

Query: 455 LLVRLCKAGMAEDA 468
           L+  L K G  +DA
Sbjct: 453 LIDGLGKVGRVDDA 466



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 185/399 (46%), Gaps = 13/399 (3%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH----ERV 149
           N+  Y +++     + + E    + + M  + C       L L+  + +C       E+ 
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPD----LQLLNTYMDCMFKAGEPEKG 536

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
             MF +I    R  P  ++ S  ++ LI++   +       YS +      +T  +NI+I
Sbjct: 537 RAMFEEIKS-RRFVPDARSYSILIHGLIKAGFANETYELF-YSMKEQGCVLDTRAYNIVI 594

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
              CK G +  A+++L+EMK      P ++TY ++IDGL K  R  EA  LFEE  SK +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFE-PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-R 652

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I  + + Y+ LIDGF + G++D A  I+E +   G  PNV+ + +L++   K  ++ EA 
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEAL 712

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
             F  MK     P+ + Y  LIN  C+  + ++A    +EM+++G K   +++  ++ GL
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            + G I EA  + ++   +G   + A Y  ++           A  L      RG   H 
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHN 832

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSW 487
            T   LL  L K    E AAI    L E G  +  + SW
Sbjct: 833 KTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAARSW 871



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 185/382 (48%), Gaps = 38/382 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L   +  +++L  + ++D A   L+ S Q   L PN    NI++   CK   L+ A  
Sbjct: 375 PNLSTYNILIDMLCRAGKLDCAFE-LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + ++M   ++  P+ IT+ +LIDGL K GR  +A +++E+M+  D    +++ Y  LI  
Sbjct: 434 IFEQMD-YKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD-CRTNSIVYTSLIKN 491

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNV---------------------------------- 309
           F   G+ +   KI + M N  C+P++                                  
Sbjct: 492 FFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPD 551

Query: 310 -FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
             +Y+ L++G  K G   E  E+F  MK      DT  Y  +I+ FC+ G+V++A +LL+
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EMK +G +  +VT+  ++ GL +  +++EA  + E+     I LN   Y  +++   + G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
            +++A  +L  ++ +G  P+  T N LL  L KA    +A +    + E+   P   ++ 
Sbjct: 672 RIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731

Query: 489 LLVELICRGRKLLFAFELLDEL 510
           +L+  +C+ RK   AF    E+
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEM 753



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 191/412 (46%), Gaps = 5/412 (1%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           Y   +D   +  K +       ++     K  E  + +++      +  +  +EMF  + 
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
              R  P   A +T +     + + D A + L+       + P+   +N ++    K G 
Sbjct: 301 K-NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI-PSVIAYNCILTCLRKMGK 358

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           ++ A  V +EMKK   + PNL TY+ LID LC+ G+   A EL + M  K  + P+  T 
Sbjct: 359 VDEALRVFEEMKKD--AAPNLSTYNILIDMLCRAGKLDCAFELRDSM-QKAGLFPNVRTV 415

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N+++D  C+  K+D A  I E M    C P+   + +L++G  K G++ +A +++++M +
Sbjct: 416 NIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLD 475

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
              + ++I YT+LI  F   GR ++  ++ K+M  + C  D+   N  +  + + G+ E+
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEK 535

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
              M E++       +  SY I+++   + G   +  EL   M  +G +      N ++ 
Sbjct: 536 GRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
             CK G    A   L  +   GF+P   ++  +++ + +  +L  A+ L +E
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647


>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 211/431 (48%), Gaps = 27/431 (6%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
           ++K +K+   + E FN V  Q        TY+ IL  L +  KF++ ++VL+ +      
Sbjct: 164 MLKIKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSI 223

Query: 128 FHEG-IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
            H   +F  ++  +  C     V +   K +   ++                 N +D+  
Sbjct: 224 DHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKL---------------RNAIDV-- 266

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            F +  +     +  +C   I      +RG +  A    +EM++ ++S PN+ T + ++ 
Sbjct: 267 -FCQMKDYGFLPRVESCNAYISASISLQRGDI--ALTFYREMQRYRIS-PNVYTLNMVMC 322

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
             CK G+  +AIE+F+ M +     P   +YN LI G+C  G ++   K+   M+ NG  
Sbjct: 323 AFCKWGKLEKAIEVFKRMETMG-FSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVR 381

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+   + TL+NGFC+ GKL EA ++F EMK   + P+TI Y TLIN + + G  +    L
Sbjct: 382 PDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRL 441

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
             EM   G KADI+T+N ++ GLC EG+ ++A  ++++L  + +  N +++  ++   C 
Sbjct: 442 HDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCV 501

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           +   E+A +L + M+  G  P+Y T   L+   CK    + A   +  + E    P+SD+
Sbjct: 502 RKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDT 561

Query: 487 WALLVELICRG 497
              L EL CRG
Sbjct: 562 ---LSEL-CRG 568



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 2/155 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K +   +N LI   C  G  + A  ++KE+ +  +  PN  T+S LI G C       A
Sbjct: 450 IKADILTYNALILGLCMEGRTKKAAYLVKELDRENL-VPNSSTFSALITGQCVRKNSERA 508

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L++ M+ +    P+  T+ +LI  FC+    D A +++  M      P+    + L  
Sbjct: 509 FQLYKSMI-RSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCR 567

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           G    GK + A ++  EM+   L P+    +  IN
Sbjct: 568 GLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTIN 602


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 167/316 (52%), Gaps = 1/316 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   ++ +I   CKRG+++ AFE+L+EM K+    PN+ T+++LI GLCK G    A
Sbjct: 310 LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWK-PNVYTHTSLIHGLCKKGWTERA 368

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF +++  D   P+  TY  +I G+C+  K+ RA+ + E MK  G  PN   YTTL++
Sbjct: 369 FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 428

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK G   +A E+ + M N    P+T  Y ++++  C+ GR +EA +LL    +   +A
Sbjct: 429 GHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEA 488

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D VT+ I++   C+   + +AL  L K++  G   +   Y  ++   C++  ++ + +L 
Sbjct: 489 DGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLF 548

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             ++  G  P   T   ++   C+      A      + + G  P+S S+  L+  +C+ 
Sbjct: 549 DEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKE 608

Query: 498 RKLLFAFELLDELVIK 513
            +L  A +L D ++ K
Sbjct: 609 SRLDEARQLYDTMIDK 624



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 215/470 (45%), Gaps = 9/470 (1%)

Query: 45  ETSDTCVDARKRSRFISHGAAISLIKCEKE---PQCALEIFNTVSEQKGFNHNNATYATI 101
           E  D  +D R +   ++      +I    E    + A  +F+ +S  +G   ++ TY  I
Sbjct: 192 EAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMS-ARGVYPDSCTYKYI 250

Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
           +    R       D  + +M              ++  F   SL  R +  FHK+  +  
Sbjct: 251 IVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGL 310

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
             P+L   S+ ++ L +   V  A   L+   ++   KPN      LI   CK+G  E A
Sbjct: 311 S-PNLINYSSMISGLCKRGSVKQAFELLEEMVKN-GWKPNVYTHTSLIHGLCKKGWTERA 368

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-ILPDALTYNVL 280
           F +  ++ +S    PN+ TY+ +I G CK  +   A  LFE M  K+Q ++P+  TY  L
Sbjct: 369 FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERM--KEQGLVPNTNTYTTL 426

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G   +A ++ME M N G  PN   Y ++++G CK G+ +EA ++ +      +
Sbjct: 427 IDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQI 486

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           + D + YT LI+  C+   +++AL  L +M + G + DI  +  ++   CR+  ++++  
Sbjct: 487 EADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEK 546

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           + +++   G+   K +Y  ++   C++ ++  A++  + M   G  P   +   L+  LC
Sbjct: 547 LFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC 606

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           K    ++A      +++ G  P   +   L    C+      A  +L+ L
Sbjct: 607 KESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 656



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 42/335 (12%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C++E     E+     +++G   N  TY T++D   +   F     ++  M+      +E
Sbjct: 396 CKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMS------NE 449

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
           G F N       C+ +  V  +  +     R + + K ++T     IE++ V        
Sbjct: 450 GFFPN------TCTYNSIVDGLCKR----GRAEEAFKLLNTGFQNQIEADGV-------- 491

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
                         + ILI   CKR  +  A   L +M K     P++  Y+TLI   C+
Sbjct: 492 -------------TYTILISEQCKRADMNQALVFLNKMFKVGFQ-PDIHLYTTLIAAFCR 537

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
               +++ +LF+E++ K  + P   TY  +I G+CR  KV  A K  + M ++GC P+  
Sbjct: 538 QNMMKDSEKLFDEVI-KLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSI 596

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +Y  L++G CKE +L EA++++D M +  L P  +   TL   +C+      A+ +L+ +
Sbjct: 597 SYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 656

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            +   K  I T + ++  LC E K+  A     KL
Sbjct: 657 NK---KLWIRTVHTLIRKLCCEKKVALAALFFHKL 688



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 89/193 (46%)

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           F + GKL+EA ++  +M+N  L   T     +I        V+ A  +  EM  RG   D
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             T+  I+ G CR G + EA   + ++   G  ++ A+  +++   C+K  + +A+    
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +   G  P+    + ++  LCK G  + A   L  +V+ G+KP   +   L+  +C+  
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 363

Query: 499 KLLFAFELLDELV 511
               AF L  +L+
Sbjct: 364 WTERAFRLFLKLI 376



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 80/162 (49%)

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           ++  F   G++ EA++++ +M+ +G        N I+        +E A  + +++   G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +Y +  +Y+ ++   C+ G + +A   +  M+ RGF+   AT   ++   C+  +   A 
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                + +MG  P   +++ ++  +C+   +  AFELL+E+V
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV 341


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 178/387 (45%), Gaps = 42/387 (10%)

Query: 164 PSLKAISTCLNLLIESNQV-DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P   A +T L+ L ++  +  + Q F    +  +R  PN   + IL+K  CK G +  A 
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVR--PNVVTYGILVKGLCKAGRVGDAL 192

Query: 223 EVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEE-MVSKDQILPDALTYNVL 280
            VL  M   +    P+++  + ++DGLCK GR ++A++  EE M S     P+ +TYN L
Sbjct: 193 SVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCL 252

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA------------ 328
              FCR G V  A +++  M+     PN     T++ G C  G++  A            
Sbjct: 253 AHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWP 312

Query: 329 -------------------------KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
                                     E+F EM +    PD I Y T+I+   +AGR+D+A
Sbjct: 313 EARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDA 372

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             +   MK+ G + D   +NI++GG CR  ++ EA  +L ++   G+  +  +Y  +L+ 
Sbjct: 373 WSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSG 432

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+ G+     ELL  M+  G  P   T   L+   CK G  ++A      + E G +P 
Sbjct: 433 LCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPN 492

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
           +  +  L++ +C+ R    A EL DE+
Sbjct: 493 TVIYNTLIDFLCKSRDTSLAIELFDEM 519



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 190/417 (45%), Gaps = 47/417 (11%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           + + + T+LD LA+      +  +   M   + + +   +  L+K           L + 
Sbjct: 136 DTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVL 195

Query: 154 HKIH-PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR----LKPNTCIFNIL 208
             +  P +   P +  ++  ++ L ++ ++   Q  +K+  + +R      PNT  +N L
Sbjct: 196 DGMSGPESDVCPDVVMLNNIVDGLCKTGRL---QQAVKFVEERMRSVHGCAPNTVTYNCL 252

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR-------FRE----- 256
               C+ G +  A E++ +M+K +++ PN +T +T++ GLC  GR       FRE     
Sbjct: 253 AHAFCRAGNVGMACELVAKMEKERVT-PNAVTLNTIVGGLCWVGRVGAALEFFREKRTVW 311

Query: 257 -------------------------AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
                                    A+ELF EMV +    PDA+ Y  +I G  + G++D
Sbjct: 312 PEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNS-PDAIMYFTMISGLTQAGRLD 370

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            A  +   MK  G   +   Y  L+ GFC+  +L EA E+  EMK   L+PD   Y TL+
Sbjct: 371 DAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLL 430

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
           +  C+AG      ELL +M + GC+  +VTF  ++ G C+ G+I+EAL +   +   GI 
Sbjct: 431 SGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQ 490

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            N   Y  +++F C+  +   AIEL   M  +    +  T N LL  L    M E A
Sbjct: 491 PNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKA 547



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 130/303 (42%), Gaps = 45/303 (14%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A     + ++     PD   +N L+D   + G +    ++   M++    PNV  Y  L
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 316 MNGFCKEGKLQEAKEVFDEMKN---------FLLK------------------------- 341
           + G CK G++ +A  V D M            +L                          
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238

Query: 342 -----PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
                P+T+ Y  L + FCRAG V  A EL+ +M++     + VT N I+GGLC  G++ 
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298

Query: 397 EALGMLEK---LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            AL    +   +W +    N  +Y  ++        +  A+EL   M+  G  P      
Sbjct: 299 AALEFFREKRTVWPEA-RGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYF 357

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            ++  L +AG  +DA      + + GF+ ++ ++ +L+   CR ++L  A+ELL E+  K
Sbjct: 358 TMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEM--K 415

Query: 514 ESG 516
           E+G
Sbjct: 416 EAG 418



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 6/194 (3%)

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           AL Y +L          D A+ + + +      P+   + TL++   + G L    ++F 
Sbjct: 104 ALLYKIL--SRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFA 161

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK--ERGCKADIVTFNIILGGLCR 391
            M++  ++P+ + Y  L+   C+AGRV +AL +L  M   E     D+V  N I+ GLC+
Sbjct: 162 SMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCK 221

Query: 392 EGKIEEALGMLEKLWYD--GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            G++++A+  +E+      G   N  +Y  + +  C+ G +  A EL+  M      P+ 
Sbjct: 222 TGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNA 281

Query: 450 ATSNELLVRLCKAG 463
            T N ++  LC  G
Sbjct: 282 VTLNTIVGGLCWVG 295



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 129/313 (41%), Gaps = 43/313 (13%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ--MTYETCKFHEGIFLNLMKHFSNCS 144
           E++    N  T  TI+  L    +  A     R+    +   + +   +  L+  F + +
Sbjct: 273 EKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTN 332

Query: 145 LHERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
                +E+FH++     E  S  AI   T ++ L ++ ++D A + +  S +    + + 
Sbjct: 333 NVGVAMELFHEM---VDEGNSPDAIMYFTMISGLTQAGRLDDAWS-MATSMKKAGFQLDA 388

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMS---------------------------- 234
             +NILI   C+R  L  A+E+L EMK++ +                             
Sbjct: 389 KAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGK 448

Query: 235 ------YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
                  P+++T+ TLI G CK G+  EA+ +F  M  +  I P+ + YN LID  C+  
Sbjct: 449 MIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSM-DESGIQPNTVIYNTLIDFLCKSR 507

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
               A ++ + M+      NV  +  L+ G   +   ++A E+ D M+     PD +   
Sbjct: 508 DTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTID 567

Query: 349 TLINCFCRAGRVD 361
            L+      G  D
Sbjct: 568 ILMEWLPVIGETD 580



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 41/221 (18%)

Query: 80  EIFNTVSEQK--GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E +  + E K  G   +  TY T+L  L +   F AVD +L +M    C+          
Sbjct: 406 EAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCR---------- 455

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     PS+    T ++   +  Q+D A    +  ++   
Sbjct: 456 --------------------------PSVVTFGTLIHGYCKVGQIDEALRIFRSMDES-G 488

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PNT I+N LI   CK      A E+  EM++  +   N+ T++ L+ GL       +A
Sbjct: 489 IQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPA-NVTTFNALLKGLRDKNMPEKA 547

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
            EL + ++ + +  PD +T ++L++     G+ DR K  M+
Sbjct: 548 FELMD-LMREGRCTPDYVTIDILMEWLPVIGETDRLKHFMQ 587


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 197/432 (45%), Gaps = 44/432 (10%)

Query: 91  FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVL 150
           ++HN+  Y  I+    +    E  +A++  M  +  +   G++  LM  + +C   ++ L
Sbjct: 293 WHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCL 352

Query: 151 EMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-------HLR---- 197
            +F ++   T     P++ +    +NL  +  ++D A   L+ SN+       H R    
Sbjct: 353 NVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKA---LQISNEMEDQGIKHNRKTYS 409

Query: 198 --------------------------LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                                     +KP+   +NIL+   CK G +  A E+L  M+  
Sbjct: 410 MIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESG 469

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
               P L TY+ +IDG  K G  R A E   +M       P A TYNV++ G  + G++D
Sbjct: 470 DCP-PTLRTYTIIIDGFMKIGDLRMAFETVRDM-KMAGFRPSAATYNVIMHGLAQAGQMD 527

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
           RA  I++ M   G +PN  +YTTL+ G+   G +  A + F+ +K   LKPD I Y +L+
Sbjct: 528 RAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLL 587

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
              C+AGR+   L +  EM   G   +   +NI+L G  + G + EA  +++K+ ++G+ 
Sbjct: 588 KACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLT 647

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            +  SY   +N  C+ G++ KA E +  M  +G  P+      L+     A   E A I 
Sbjct: 648 PDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALIC 707

Query: 472 LFGLVEMGFKPE 483
              +   G  P+
Sbjct: 708 YDEMKSAGMIPD 719



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 202/446 (45%), Gaps = 48/446 (10%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E +G + N ATY+ I+    R    EA +   ++   E    ++ I+ N++  +      
Sbjct: 254 EAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNM 313

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKY--SNQHLRLKP 200
           ER   +   +     E+  L+A     N+L++       VD   N  +   +     L P
Sbjct: 314 ERAEAIMTAM-----EEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSP 368

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
               +  LI  + K G ++ A ++  EM+   + + N  TYS +IDG  + G    A  +
Sbjct: 369 TVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKH-NRKTYSMIIDGYVQLGDTANAFSV 427

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           FE+M S   I PD +TYN+L++ FC+ G+++RA +++  M++  C P +  YT +++GF 
Sbjct: 428 FEDM-SNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFM 486

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM---------- 370
           K G L+ A E   +MK    +P    Y  +++   +AG++D A  ++ EM          
Sbjct: 487 KIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNER 546

Query: 371 -------------------------KERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
                                    KE G K D++ +  +L   C+ G+++  L +  ++
Sbjct: 547 SYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEM 606

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+ +N   Y I+L+   Q+G++ +A ++++ M   G  P   +    +   CKAG  
Sbjct: 607 AAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDM 666

Query: 466 EDAAIALFGLVEMGFKPESDSWALLV 491
             A   +  + + G +P   ++  L+
Sbjct: 667 LKATETIEQMKQQGVQPNLQAYTTLI 692



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 158/318 (49%), Gaps = 5/318 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN   +  LI  +     L  A   ++EM+   +S PN  TYS +I G  + G    A
Sbjct: 223 IEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVS-PNAATYSVIISGYGRLGDVEAA 281

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              F+  +S++    D + YN +I  +C+ G ++RA+ IM  M+  G    +  Y  LM+
Sbjct: 282 ERWFQRALSENWHHNDVI-YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMD 340

Query: 318 GFCKEGKLQEAKEVFDEMKNFL---LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           G+     + +   VF  +K      L P  + Y  LIN + + G++D+AL++  EM+++G
Sbjct: 341 GYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQG 400

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
            K +  T+++I+ G  + G    A  + E +   GI  +  +Y I++N  C+ G++ +A+
Sbjct: 401 IKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRAL 460

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
           ELL  M      P   T   ++    K G    A   +  +   GF+P + ++ +++  +
Sbjct: 461 ELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGL 520

Query: 495 CRGRKLLFAFELLDELVI 512
            +  ++  A  ++DE+V+
Sbjct: 521 AQAGQMDRAASIIDEMVV 538



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 9/210 (4%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P   ++T L+N + K G    A+  F+ M+   ++P+   YT LI+ +  A  +  A+  
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           ++EM+  G   +  T+++I+ G  R G +E A    ++   +  + N   Y  +++  C+
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRL--CKAGMAEDAAIALF----GLVEMGF 480
            G +E+A  ++  M  +G        N L+     C+   A D  + +F       E G 
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCR---AVDKCLNVFRRLKARTETGL 366

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDEL 510
            P   S+  L+ L  +  K+  A ++ +E+
Sbjct: 367 SPTVVSYGCLINLYSKLGKMDKALQISNEM 396



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/283 (19%), Positives = 122/283 (43%), Gaps = 41/283 (14%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P    + +L++ + + G    A+   E M+  G  PNV +YT L++ +     L+ A   
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249

Query: 332 FDEMKNFLLKPDTIGYTT-----------------------------------LINCFCR 356
            +EM+   + P+   Y+                                    +I+ +C+
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL---WYDGIYLN 413
           AG ++ A  ++  M+E+G +A +  +N+++ G      +++ L +  +L      G+   
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPT 369

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
             SY  ++N   + G+++KA+++   M  +G   +  T + ++    + G   +A     
Sbjct: 370 VVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFE 429

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
            +   G KP+  ++ +L+   C+  ++  A ELL  +   ESG
Sbjct: 430 DMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARM---ESG 469


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 219/465 (47%), Gaps = 15/465 (3%)

Query: 54  RKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEA 113
           +K    +S    ++++K   +P  A   F  VS+   F H       +L+ L   ++ E 
Sbjct: 90  KKNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIED 149

Query: 114 VDAVLRQMTYETCKFHEGIFLNL---MKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
           +  V   M  +       I+ NL   M  F   S+   +      +  +T     L A S
Sbjct: 150 MVFVFDLMQKKV------IYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYS 203

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
              N LI           LK   + +   +KP+   ++ L+    +RG       +L+EM
Sbjct: 204 --YNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEM 261

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K   +  PN+ TY+  I  L +  R  +A  +F+EM   +   PD +TY VLID  C  G
Sbjct: 262 KSIGLR-PNIYTYTICIRALGRARRIDDAWGIFKEM-DDEGCGPDVITYTVLIDALCAAG 319

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K+D+AK++   M+ +  +P+   Y TLM+ F K G L+  K  ++EM+     PD + YT
Sbjct: 320 KLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYT 379

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LI   C++G VD A ++L  M  +G   ++ T+N ++ GL +  +++EAL +LE +   
Sbjct: 380 ILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESL 439

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G+     SY + +++  + G+  KAI+    M  RG +P  A  N  L  L + G   +A
Sbjct: 440 GVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEA 499

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                 L + G  P+S ++ +L++   +  ++  A +LL E++ K
Sbjct: 500 EDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISK 544



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 175/330 (53%), Gaps = 9/330 (2%)

Query: 164  PSLKAISTCLNLLIESNQVDLAQNF---LKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
            P+L++ +  ++ L+ SN  + A      +K +  H    PN   +N+L+  H K   +  
Sbjct: 794  PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTH----PNNFTYNLLLDAHGKSKRINK 849

Query: 221  AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
             +++  EM+ S+   PN IT++ +I  L K+    +A++L+ E++S D   P   TY  L
Sbjct: 850  LYDLYSEMR-SRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGD-FSPTPCTYGPL 907

Query: 281  IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
            IDG  + G+ ++A KI E M + GC PN   Y  L+NGF K G++  A E+F +M    +
Sbjct: 908  IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI 967

Query: 341  KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            +PD   YT L+ C C  GR+DEA++  +E+K  G   D V++N I+ GL +  +++EAL 
Sbjct: 968  RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALS 1027

Query: 401  MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
            +  ++   GI  +  +Y  ++      G+++ A+++   +   G  P   T N L+    
Sbjct: 1028 LFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHS 1087

Query: 461  KAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             +G  + A      ++ +G  P ++++A L
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 177/355 (49%), Gaps = 7/355 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P++   + C+  L  + ++D A    K  +      P+   + +LI   C  G L+ A 
Sbjct: 267 RPNIYTYTICIRALGRARRIDDAWGIFKEMDDE-GCGPDVITYTVLIDALCAAGKLDKAK 325

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+  +M+ S  S P+ +TY TL+D   K G   E ++ F   +  D   PD +TY +LI+
Sbjct: 326 ELYVKMRASSHS-PDRVTYITLMDKFGKVGDL-ETVKRFWNEMEVDGYAPDVVTYTILIE 383

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+ G VDRA  +++ M   G  PN+  Y T++ G  K  +L EA E+ + M++  +KP
Sbjct: 384 ALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKP 443

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
               Y   I+ + ++G   +A++  + MK+RG    I   N  L  L   G+I EA  + 
Sbjct: 444 TAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIF 503

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
             L   G+  +  +Y +++    + G+++KA +LL  M+ +G  P     N L+  L KA
Sbjct: 504 NDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKA 563

Query: 463 GMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           G   DAA  +FG L  +   P   ++ +L+  + +  K+L A EL   +   ESG
Sbjct: 564 GRV-DAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMT--ESG 615



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 173/341 (50%), Gaps = 10/341 (2%)

Query: 136  LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK--YSN 193
            LM      +  E+ LE+F  +        +        NLL++++      N L   YS 
Sbjct: 802  LMDGLLGSNFTEKALELFEDMKSAGTHPNNFT-----YNLLLDAHGKSKRINKLYDLYSE 856

Query: 194  QHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
               R  +PN    NI+I    K   L  A ++  E+     S P   TY  LIDGL K G
Sbjct: 857  MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFS-PTPCTYGPLIDGLLKAG 915

Query: 253  RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
            R  +A+++FEEM+      P+++ YN+LI+GF + G++D A ++ + M   G  P++ +Y
Sbjct: 916  RSEQAMKIFEEMLDYG-CGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSY 974

Query: 313  TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            T L+   C  G++ EA + F+E+K   L PDT+ Y  +IN   ++ R+DEAL L  EMK 
Sbjct: 975  TILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKN 1034

Query: 373  RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            RG   D+ T+N ++  L   GK++ A+ M E+L   G+  +  +Y  ++      G  ++
Sbjct: 1035 RGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQ 1094

Query: 433  AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
            A  + + M+  G  P+  T  +L  +  +AG+  +   A+F
Sbjct: 1095 AFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFGAVF 1135



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 168/317 (52%), Gaps = 8/317 (2%)

Query: 185  AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
            AQN      ++L + P    +N L+         E A E+ ++MK S  ++PN  TY+ L
Sbjct: 779  AQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMK-SAGTHPNNFTYNLL 837

Query: 245  IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
            +D   K+ R  +  +L+ EM S+    P+A+T+N++I    +   +++A  +   + +  
Sbjct: 838  LDAHGKSKRINKLYDLYSEMRSRG-CEPNAITHNIIISALVKSNNLNKALDLYYELMSGD 896

Query: 305  CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             +P    Y  L++G  K G+ ++A ++F+EM ++   P+++ Y  LIN F ++G +D A 
Sbjct: 897  FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956

Query: 365  ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            EL K+M + G + D+ ++ I++  LC  G+I+EA+   E+L   G+  +  SY  ++N  
Sbjct: 957  ELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016

Query: 425  CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPE 483
             +   L++A+ L   M  RG  P   T N L++ L  AG   D A+ ++  +++ G +P 
Sbjct: 1017 GKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKV-DVAVKMYEELQLVGLEPS 1075

Query: 484  SDSWALLVELICRGRKL 500
              ++  L+    RG  L
Sbjct: 1076 VFTYNALI----RGHSL 1088



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 190/403 (47%), Gaps = 8/403 (1%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           +  TY T++DK  +    E V     +M  +        +  L++        +R  +M 
Sbjct: 339 DRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDML 398

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
             +       P+L   +T +  L+++ ++D A   L+ + + L +KP    + + I ++ 
Sbjct: 399 -DVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE-NMESLGVKPTAFSYVLFIDYYG 456

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G    A +  + MKK  +  P++   +  +  L + GR  EA ++F ++  K  + PD
Sbjct: 457 KSGDPAKAIDTFETMKKRGI-MPSIAACNASLYTLAETGRISEAEDIFNDL-HKCGLSPD 514

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           ++TYN+L+  + + G++D+A +++  M + GC P+V    +L+N   K G++  A ++F 
Sbjct: 515 SVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFG 574

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            +KN  L P  + Y  L+    + G++ +ALEL   M E GC  + +TFN +L  L +  
Sbjct: 575 RLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKND 634

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL-PHYATS 452
            ++ AL M  ++       +  +Y  ++    ++G ++ A      M  + FL P Y T 
Sbjct: 635 AVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM--KKFLSPDYVTL 692

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMG-FKPESDSWALLVELI 494
             L+  + + G  EDA   +   V     +  S  W  L+E I
Sbjct: 693 CTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECI 735



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/450 (22%), Positives = 194/450 (43%), Gaps = 38/450 (8%)

Query: 96   ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
             TY  +L  L +  K      +   MT   C  +   F +L+   S     +  L+MF +
Sbjct: 586  VTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645

Query: 156  IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
            +  +    P +   +T +  LI   ++D A  F  +      L P+      LI    + 
Sbjct: 646  M-TMMNCNPDVLTYNTIIYGLIREGRIDYA--FWFFHQMKKFLSPDYVTLCTLIPGVVRH 702

Query: 216  GTLESAFEVLKEM-------KKSQ------------------MSYPNLITYST------- 243
            G +E A +V+ E          SQ                  +S+  ++  ++       
Sbjct: 703  GRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHV 762

Query: 244  ---LIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
               LI  LCK  +  +A  +F++      I P   +YN L+DG       ++A ++ E M
Sbjct: 763  MLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDM 822

Query: 301  KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
            K+ G +PN F Y  L++   K  ++ +  +++ EM++   +P+ I +  +I+   ++  +
Sbjct: 823  KSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNL 882

Query: 361  DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
            ++AL+L  E+          T+  ++ GL + G+ E+A+ + E++   G   N   Y I+
Sbjct: 883  NKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNIL 942

Query: 421  LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
            +N   + GE++ A EL + M+  G  P   +   L+  LC  G  ++A      L   G 
Sbjct: 943  INGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002

Query: 481  KPESDSWALLVELICRGRKLLFAFELLDEL 510
             P++ S+  ++  + + R+L  A  L  E+
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLFSEM 1032



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 116/513 (22%), Positives = 215/513 (41%), Gaps = 46/513 (8%)

Query: 39  KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEP---QCALEIFNTVSEQKGFNHNN 95
           K+  P +  DT    +KR    S  A  + +    E      A +IFN +  + G + ++
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDL-HKCGLSPDS 515

Query: 96  ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
            TY  ++   ++  + +    +L +M  + C+    I  +L+         +   +MF +
Sbjct: 516 VTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGR 575

Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
           +  + +  P++   +  L  L +  ++  A      S       PNT  FN L+    K 
Sbjct: 576 LKNL-KLAPTVVTYNILLTGLGKEGKILKALELFG-SMTESGCPPNTITFNSLLDCLSKN 633

Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
             ++ A ++   M     + P+++TY+T+I GL + GR   A   F +M  K  + PD +
Sbjct: 634 DAVDLALKMFCRMTMMNCN-PDVLTYNTIIYGLIREGRIDYAFWFFHQM--KKFLSPDYV 690

Query: 276 TYNVLIDGFCRGGKVDRA-KKIMEFMKNNGCNPNVFNYTTLM------------------ 316
           T   LI G  R G+V+ A K +MEF+       N   +  LM                  
Sbjct: 691 TLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEI 750

Query: 317 -----------------NGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAG 358
                               CK  K  +A+ VFD+  KN  + P    Y  L++    + 
Sbjct: 751 LVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSN 810

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
             ++ALEL ++MK  G   +  T+N++L    +  +I +   +  ++   G   N  ++ 
Sbjct: 811 FTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHN 870

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           I+++   +   L KA++L   ++   F P   T   L+  L KAG +E A      +++ 
Sbjct: 871 IIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY 930

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           G  P S  + +L+    +  ++ FA EL  ++V
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 168/314 (53%), Gaps = 1/314 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +   I   CKR  ++ AF VL+EM    +  PN+ T+++LI+GLCK G    A  
Sbjct: 253 PNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLK-PNVYTHTSLINGLCKIGWTERAFR 311

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF +++      P+  TY V+I G+C+ GK+ RA+ ++  M   G  PN   YTTL++G 
Sbjct: 312 LFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGH 371

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CKEG    A E+ ++M+    +P+   Y  LI+  C+ G++ EA ++L+    +G + D 
Sbjct: 372 CKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDK 431

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+ +++   C++G I  AL +  ++  +G + +  +Y  ++   CQ+ ++E++ +L   
Sbjct: 432 VTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDK 491

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
            L    +P   T   ++   CK G +  A      +V+ G + +S ++  L+  +C+  +
Sbjct: 492 CLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESR 551

Query: 500 LLFAFELLDELVIK 513
           L  A  L + ++ K
Sbjct: 552 LEEARALYEGMLDK 565



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 199/440 (45%), Gaps = 17/440 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-------TCKFHE 130
           A ++F+ +  + G   +  ++  ++    R  + E VDA+L  M  +       TC    
Sbjct: 168 ARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIV 227

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
            +F    +      L  R+LEM           P++   +  ++ L +   V  A   L+
Sbjct: 228 RVFCQKGRFRDVSELFRRMLEM--------GTPPNVVNYTAWIDGLCKRAYVKQAFYVLE 279

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
                  LKPN      LI   CK G  E AF +  ++ KS    PN+ TY+ +I G CK
Sbjct: 280 EMVAK-GLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCK 338

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G+   A  L   MV +  + P+  TY  LI G C+ G  + A ++M  M+  G  PN++
Sbjct: 339 EGKLARAEMLLGRMVEQG-LAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIY 397

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y  L++G CK+GK+QEA +V     N  L+ D + YT +I   C+ G +  AL+L   M
Sbjct: 398 TYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRM 457

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            E GC  DI T+  ++   C++ ++EE+  + +K     +   K +Y  ++   C+ G+ 
Sbjct: 458 AENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKS 517

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             A+ +   M+  G      T   L+  LCK    E+A     G+++    P   +   L
Sbjct: 518 TSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTL 577

Query: 491 VELICRGRKLLFAFELLDEL 510
               CR  K + A  +LD L
Sbjct: 578 AFEYCRREKAVVAVSILDRL 597



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 2/307 (0%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N +++     G+   A +V   M       P+  ++  LI G C++GR  E   L   M 
Sbjct: 153 NWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQ 212

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +   L +A T  V++  FC+ G+     ++   M   G  PNV NYT  ++G CK   +
Sbjct: 213 GQGFCLDNA-TCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYV 271

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL-LKEMKERGCKADIVTFNI 384
           ++A  V +EM    LKP+   +T+LIN  C+ G  + A  L LK +K    K ++ T+ +
Sbjct: 272 KQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 331

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++GG C+EGK+  A  +L ++   G+  N  +Y  +++  C++G    A EL+  M   G
Sbjct: 332 MIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREG 391

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
           F P+  T N L+  LCK G  ++A   L      G + +  ++ +++   C+   + +A 
Sbjct: 392 FQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYAL 451

Query: 505 ELLDELV 511
           +L + + 
Sbjct: 452 DLFNRMA 458



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 171/351 (48%), Gaps = 14/351 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +F  + +   +  N  TY  ++    +  K    + +L +M  +    +   +  L+
Sbjct: 309 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLI 368

Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSN-Q 194
                        E+ +K+    RE  +P++   +  ++ L +  ++  A   L+ +N Q
Sbjct: 369 SGHCKEGSFNCAFELMNKMR---REGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQ 425

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            L+L   T  + ++I  HCK+G +  A ++   M ++   +P++ TY+TLI   C+  + 
Sbjct: 426 GLQLDKVT--YTVMITEHCKQGHITYALDLFNRMAENG-CHPDIHTYTTLIARYCQQRQM 482

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            E+ +LF++ ++  +++P   TY  +I G+C+ GK   A ++ E M  NGC  +   Y  
Sbjct: 483 EESQKLFDKCLAI-ELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGA 541

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L++G CKE +L+EA+ +++ M +  L P  +   TL   +CR  +   A+ +L  + +R 
Sbjct: 542 LISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRR 601

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
                 T N+++  L   G +E+A   L+K     + +++ +Y   +N SC
Sbjct: 602 KNH---TVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFIN-SC 648



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 16/203 (7%)

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y T    F   G L  A E    M               +  F  AGR+ EA +++ EM+
Sbjct: 97  YVTAATTFVDRGSLPMAHEAMRRM---------------VAAFAEAGRLPEAADMVFEMR 141

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-SYRIVLNFSCQKGEL 430
             G    + T N +L      G    A  + + +   G  L  A S+R ++   C+ G +
Sbjct: 142 SHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRM 201

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           E+   LL +M  +GF    AT   ++   C+ G   D +     ++EMG  P   ++   
Sbjct: 202 EEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAW 261

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           ++ +C+   +  AF +L+E+V K
Sbjct: 262 IDGLCKRAYVKQAFYVLEEMVAK 284


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 206/432 (47%), Gaps = 39/432 (9%)

Query: 80  EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
           E++ +   Q G + +  TY +++    R K  +A +A+   M  + C  +E  + NL+  
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG 283

Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
           F      +  L++F ++H                    E N                   
Sbjct: 284 FCEARRVDEALKLFSQMH--------------------EDN-----------------CW 306

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P    + ++I   C+ G    A  + KEM +     PN+ TY+ LI  LC++  F +A +
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQ-PNVHTYTVLICSLCEDSNFDDAKK 365

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M+ K  ++P  +TYN LIDG+C+ G    A +I+  M++N C+PN   Y  L+ GF
Sbjct: 366 ILNGMLEKG-LIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+   + +A  +  +M    L+P+ + Y  LI+  C+ G +  A +LL  M E G   D 
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+++ +  LC+ G +EEA  + E L   GI  N+  Y  +++  C+ G++     LL  
Sbjct: 485 WTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDK 544

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML  G +P+  T N L+   CK    ++A + +  +++   +P +D++ +L++ + +  +
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604

Query: 500 LLFAFELLDELV 511
              A ++ D+++
Sbjct: 605 FDQAHDMFDQML 616



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 216/466 (46%), Gaps = 36/466 (7%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLA-----------RYKKFEAVDA------ 116
           +PQ AL  FN + ++ GF HN  ++ ++L+ L            R    ++ D+      
Sbjct: 89  DPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALF 148

Query: 117 ---VLRQMTYETCKFH-------EGIFLNLMKHFSNCSLHERV-LEMFHKIHPITREKPS 165
              +LR M      F          + L L+  F      + V LEM   +       P+
Sbjct: 149 VLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDM-----VTPN 203

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           +  ++T +N   +   V  A+ ++    Q   L  +T  +  LI  +C+   +++A  + 
Sbjct: 204 IFTLNTMVNGYCKLGNVVEAELYVSKIVQ-AGLSLDTFTYTSLILGYCRNKNVDAANAIF 262

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
             M  ++    N ++Y+ LI G C+  R  EA++LF +M  +D   P   TY V+I   C
Sbjct: 263 LSMP-NKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM-HEDNCWPTVRTYTVIIFALC 320

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + G+   A  + + M    C PNV  YT L+   C++    +AK++ + M    L P  +
Sbjct: 321 QLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVV 380

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  LI+ +C+ G    ALE+L  M+   C  +  T+N ++ G CR   I +A+ +L K+
Sbjct: 381 TYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
               +  N  +Y I+++  C++G+L  A +LL LM   G +P   T +  +  LCK G+ 
Sbjct: 441 LERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLV 500

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           E+A      L E G K     ++ L++  C+  K+     LLD+++
Sbjct: 501 EEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKML 546



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 158/307 (51%), Gaps = 9/307 (2%)

Query: 218 LESAFEVLKEMKK------SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
           L S F ++ EMK         M  PN+ T +T+++G CK G   EA EL+   + +  + 
Sbjct: 178 LLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA-ELYVSKIVQAGLS 236

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
            D  TY  LI G+CR   VD A  I   M N GC  N  +YT L++GFC+  ++ EA ++
Sbjct: 237 LDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKL 296

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F +M      P    YT +I   C+ GR  EAL + KEM E+ C+ ++ T+ +++  LC 
Sbjct: 297 FSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCE 356

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           +   ++A  +L  +   G+  +  +Y  +++  C+KG    A+E+L LM      P+  T
Sbjct: 357 DSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNART 416

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            NEL++  C+      A   L  ++E   +P   ++ +L+   C+   L  A++LL   +
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLS--L 474

Query: 512 IKESGTI 518
           + ESG +
Sbjct: 475 MNESGLV 481



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 160/314 (50%), Gaps = 2/314 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +  LI   C+   ++ A ++  +M +    +P + TY+ +I  LC+ GR  EA+ +
Sbjct: 273 NEVSYTNLIHGFCEARRVDEALKLFSQMHEDN-CWPTVRTYTVIIFALCQLGRKTEALNM 331

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+EM  K    P+  TY VLI   C     D AKKI+  M   G  P+V  Y  L++G+C
Sbjct: 332 FKEMTEK-HCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYC 390

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K+G    A E+   M++    P+   Y  LI  FCR   + +A+ LL +M ER  + ++V
Sbjct: 391 KKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVV 450

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T+NI++ G C+EG +  A  +L  +   G+  ++ +Y + ++  C++G +E+A  L   +
Sbjct: 451 TYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESL 510

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G   +    + L+   CK G   D    L  ++  G  P S ++  L++  C+ +  
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNF 570

Query: 501 LFAFELLDELVIKE 514
             A  L+D ++ ++
Sbjct: 571 KEARLLVDIMIKRD 584



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 169/349 (48%), Gaps = 33/349 (9%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +L+PN   +NILI   CK G L SA+++L  M +S +  P+  TYS  ID LCK G   E
Sbjct: 444 KLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGL-VPDEWTYSVFIDTLCKRGLVEE 502

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  LFE +  K  I  + + Y+ LIDG+C+ GKV   + +++ M + GC PN   Y +L+
Sbjct: 503 ARSLFESLKEKG-IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLI 561

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+CKE   +EA+ + D M    ++P    YT LI+   +    D+A ++  +M   G  
Sbjct: 562 DGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSH 621

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+  +   +   C  G++++A  ++ K+   GI  +   Y + ++   + G ++ A  +
Sbjct: 622 PDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGI 681

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKA----------------GMAEDA------------ 468
           L+ M   G  P Y T + L+  L  A                G+A +             
Sbjct: 682 LKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEF 741

Query: 469 AIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
            + LFG + E G  P ++++   +  +C+   L  A  L D +  KE G
Sbjct: 742 TLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM--KEKG 788



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 145/359 (40%), Gaps = 66/359 (18%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K N  I++ LI  +CK G +     +L +M  S    PN ITY++LIDG CK   F+EA
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKML-SAGCVPNSITYNSLIDGYCKEKNFKEA 573

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L + M+ +D I P A TY +LID   +  + D+A  + + M + G +P+VF YT  ++
Sbjct: 574 RLLVDIMIKRD-IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIH 632

Query: 318 GFCKE-----------------------------------GKLQEAKEVFDEMKNFLLKP 342
            +C                                     G +  A  +   M     +P
Sbjct: 633 AYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEP 692

Query: 343 DTIGYTTLINCFCRAG---------------------------RVDE--ALELLKEMKER 373
               Y+ LI     A                            RVD    L+L  +M E 
Sbjct: 693 SYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEH 752

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           GC  +  T+   + GLC+ G +E A  + + +   G   N+  Y  +L  SCQ G   +A
Sbjct: 753 GCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEA 812

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           I  L +M+    LPH  +   LL  L   G  E A       ++  +  +   W +L++
Sbjct: 813 IRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLID 871



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 156/374 (41%), Gaps = 32/374 (8%)

Query: 94  NNATYATILDKLARYKKFEA----VDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           N+ TY +++D   + K F+     VD ++++        +  +  NL+K       H+  
Sbjct: 553 NSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMF 612

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
            +M       T   P +   +  ++      ++  A+  +   N    + P+T ++ + I
Sbjct: 613 DQMLS-----TGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAK-GIMPDTMLYTLFI 666

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
             + + G+++ AF +LK M +     P+  TYS LI  L  N + +E     E       
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCE-PSYYTYSCLIKHL-SNAKPKEVSSSSELSDLSSG 724

Query: 270 ILPDALT-------YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           +  +  +       Y   +D F   GK          M  +GC PN   Y   + G CK 
Sbjct: 725 VASNDFSNCWRRVDYEFTLDLF---GK----------MAEHGCAPNANTYGKFITGLCKV 771

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G L+ A  +FD MK     P+   Y +L+ C C+ G   EA+  L  M E      + + 
Sbjct: 772 GCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSC 831

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
            ++L GL  EG  E+A  +           ++  ++++++   +KG  +K  +L  +M  
Sbjct: 832 KLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMET 891

Query: 443 RGFLPHYATSNELL 456
           +G   H  T + L+
Sbjct: 892 QGCQIHPKTYSMLI 905



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 94/266 (35%), Gaps = 45/266 (16%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KG   +   Y   +D   R+   +    +L++M    C+     +  L+KH SN    E 
Sbjct: 653 KGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEV 712

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
                           +    S C   +     +DL     ++        PN   +   
Sbjct: 713 SSSSELSD---LSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHG-----CAPNANTYGKF 764

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           I   CK G LE A  +   MK+   S PN   Y++L+   C+ G + EAI   + M+ ++
Sbjct: 765 ITGLCKVGCLEVAHRLFDHMKEKGQS-PNEDIYNSLLGCSCQLGLYGEAIRWLDIMI-EN 822

Query: 269 QILP-----------------------------------DALTYNVLIDGFCRGGKVDRA 293
           + LP                                   D + + VLIDG  + G  D+ 
Sbjct: 823 RHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKC 882

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGF 319
             +   M+  GC  +   Y+ L+ GF
Sbjct: 883 SDLFGIMETQGCQIHPKTYSMLIEGF 908


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 169/352 (48%), Gaps = 39/352 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           +KP+   + IL+   CK G +  A +VL  M        P++   +T++DGLCK GR ++
Sbjct: 162 VKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQ 221

Query: 257 AIELFEE-MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           AI   +E M       P+A+TYN L D FCR G +  A KI+  M+  G  PNV    T+
Sbjct: 222 AIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTI 281

Query: 316 MNGFCKEGKLQEA-------------------------------------KEVFDEMKNF 338
           + G C+ G++  A                                      E+F EM + 
Sbjct: 282 IGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADH 341

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
             +PD + Y T+I+   +AGR+ +A      MK+ G K D   +NI++GG CR+ K+ EA
Sbjct: 342 GHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEA 401

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             +LE++   G+  +  +Y  +L+  C+ G+     ELL  M+  G  P   T   L+  
Sbjct: 402 YELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHG 461

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            CKAG  ++A      + E   +P +  +  L++ +C+ R++  A +L DE+
Sbjct: 462 YCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEM 513



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 194/438 (44%), Gaps = 55/438 (12%)

Query: 82  FNTVSEQKGFNHNN----------ATYATILDKLARYKKFEAVDAVLRQMTYETCK---F 128
           F++ +E  GF  ++          + + ++L  L R      +  +   M   + K    
Sbjct: 108 FSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVV 167

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
             GI LN +    +     +VL+      P +   P +  ++T ++ L +  ++  A  F
Sbjct: 168 TYGILLNGLCKSGHVGDALKVLDRMSS--PGSDVCPDIAILNTVVDGLCKIGRLQQAIIF 225

Query: 189 LKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           +    +H+    PN   +N L    C+ G +  A +++  M+K  ++ PN+IT +T+I G
Sbjct: 226 VDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVA-PNVITMNTIIGG 284

Query: 248 LCKNGR-------FRE------------------------------AIELFEEMVSKDQI 270
           LC+ GR       FRE                              A+ELF EM      
Sbjct: 285 LCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGH- 343

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            PDA+ Y  +I G  + G++  A      MK  G   +   Y  L+ GFC++ KL EA E
Sbjct: 344 RPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYE 403

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           + +EMK   L+PD   Y TL++  C+AG      ELL  M + GC+  +VTF  ++ G C
Sbjct: 404 LLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYC 463

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + GK +EAL +   +    I  N   Y  +++F C+  E++ AI+L   M  +    +  
Sbjct: 464 KAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVT 523

Query: 451 TSNELLVRLCKAGMAEDA 468
           T N LL  L    MAE A
Sbjct: 524 TYNALLKGLQDKKMAEKA 541



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 136/263 (51%), Gaps = 3/263 (1%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           ST  +  +  N VD+A         H   +P+  ++  +I    + G L  A      MK
Sbjct: 316 STLASAFLHCNNVDMAMELFHEMADHGH-RPDAVMYFTMISGLTQAGRLLDACTTAASMK 374

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           K+     +   Y+ LI G C+  +  EA EL EEM     + PD  TYN L+ G C+ G 
Sbjct: 375 KAGFKL-DAKAYNILIGGFCRKKKLHEAYELLEEMKGVG-LQPDVYTYNTLLSGLCKAGD 432

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
                +++  M ++GC P+V  + TL++G+CK GK  EA  +F  M    ++P+T+ Y T
Sbjct: 433 FSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNT 492

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI+  C++  VD A++L  EM+E+   A++ T+N +L GL  +   E+A  +++++  + 
Sbjct: 493 LIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREER 552

Query: 410 IYLNKASYRIVLNFSCQKGELEK 432
              N  +  +++ +  + GE E+
Sbjct: 553 CTPNYVTVDVLMEWLPEIGETER 575



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 170/377 (45%), Gaps = 44/377 (11%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A  FL+ S       P+  IFN L+    + G L    E+   M+ + +  P+++TY  L
Sbjct: 114 AAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVK-PDVVTYGIL 172

Query: 245 IDGLCKNGRFREAIELFEEMVSK-DQILPDALTYNVLIDGFCRGGKVDRAKKIM-EFMKN 302
           ++GLCK+G   +A+++ + M S    + PD    N ++DG C+ G++ +A   + E M++
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 303 -NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
            +GC PN   Y  L + FC+ G +  A ++   M+   + P+ I   T+I   CR GRV 
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292

Query: 362 EALELLKEMKE--RGCKADIVTFNII---------------------------------- 385
            ALE  +E +      + + VT++ +                                  
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352

Query: 386 -LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
            + GL + G++ +A      +   G  L+  +Y I++   C+K +L +A ELL  M   G
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL---L 501
             P   T N LL  LCKAG        L  +++ G +P   ++  LV   C+  K    L
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472

Query: 502 FAFELLDELVIKESGTI 518
             F  +DE  I+ +  I
Sbjct: 473 RIFRSMDEARIQPNTVI 489



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 43/297 (14%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA     + ++     PD   +N L+    R G +    ++   M++    P+V  Y  L
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 316 MNGFCKEGKLQEAKEVFDEMK-------------NFLLK--------------------- 341
           +NG CK G + +A +V D M              N ++                      
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 342 -----PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
                P+ + Y  L + FCR G +  A +++  M++ G   +++T N I+GGLCR G++ 
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292

Query: 397 EALGMLEK---LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            AL    +   +W +    N  +Y  + +       ++ A+EL   M   G  P      
Sbjct: 293 AALEFFREKRTVWPEA-RGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYF 351

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            ++  L +AG   DA      + + GFK ++ ++ +L+   CR +KL  A+ELL+E+
Sbjct: 352 TMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEM 408



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 98/196 (50%), Gaps = 6/196 (3%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P AL  + L+  F      + A  + + + +    P++  + +L+    + G L+   E+
Sbjct: 96  PSALLLSKLVRRF--SSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTEL 153

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA--DIVTFNIILGGL 389
           F  M++  +KPD + Y  L+N  C++G V +AL++L  M   G     DI   N ++ GL
Sbjct: 154 FTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGL 213

Query: 390 CREGKIEEALGMLEKLW--YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           C+ G++++A+  +++      G   N  +Y  + +  C+ G++  A +++  M   G  P
Sbjct: 214 CKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAP 273

Query: 448 HYATSNELLVRLCKAG 463
           +  T N ++  LC+ G
Sbjct: 274 NVITMNTIIGGLCRVG 289



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 2/131 (1%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   F  L+  +CK G  + A  + + M ++++  PN + Y+TLID LCK+     AI
Sbjct: 449 QPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQ-PNTVIYNTLIDFLCKSREVDVAI 507

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF+EM  K+ +  +  TYN L+ G       ++A ++M+ M+   C PN      LM  
Sbjct: 508 KLFDEMREKN-VPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEW 566

Query: 319 FCKEGKLQEAK 329
             + G+ +  K
Sbjct: 567 LPEIGETERLK 577


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 192/400 (48%), Gaps = 15/400 (3%)

Query: 80  EIFNTVSE--QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           E+F+ V+E  Q+G   N  TY TI+D   + ++     A+L +M    C  +   F  L+
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSN 193
           K F         L M+H +     E  +   IS   N+LI        +  A +F   S 
Sbjct: 247 KGFFEDGKVHDALSMWHWM---VDEGWAPSTIS--YNVLIRGLCCIGDLKGALDFFN-SM 300

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +   L PN   ++ L+      G L+ A  +  EMK S    PN++ Y+ +ID LCK   
Sbjct: 301 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCK-PNVVVYTNMIDVLCKKMM 359

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
           F +A  L ++M+  D   P+ +T+N LI   C  G+V RA  +   M+ NGC+PN   Y 
Sbjct: 360 FDQAESLIDKML-MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 418

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++G  +EG  ++A  +  EM N   +   + Y T+INC C+      A+ LL  M  +
Sbjct: 419 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ 478

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G + D  TFN I+   C+EGK+  A  +L ++       N  +Y I+++  C +G+L  A
Sbjct: 479 GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNA 538

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
           +  L  ML  G  P+ AT N +LVR     +     I LF
Sbjct: 539 MVYLLKMLYEGICPNEATWN-VLVRAIFTNIGTIGPIHLF 577



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 209/440 (47%), Gaps = 17/440 (3%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
            +KG + +  ++ TI+  + +  + E     L + T      +  +   L   F      
Sbjct: 131 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAE-TVPVQASYNAVVHALCGEF------ 183

Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            R+ E+F  ++ + +   +P++   +T ++   ++ ++ +A   L      +   PN   
Sbjct: 184 -RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM-VSMGCTPNVLT 241

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           F  L+K   + G +  A  +   M     + P+ I+Y+ LI GLC  G  + A++ F  M
Sbjct: 242 FTALVKGFFEDGKVHDALSMWHWMVDEGWA-PSTISYNVLIRGLCCIGDLKGALDFFNSM 300

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             ++ +LP+A TY+ L+DGF   G +D A  I   MK++GC PNV  YT +++  CK+  
Sbjct: 301 -KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMM 359

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
             +A+ + D+M      P+T+ + TLI   C  GRV  AL +   M+  GC  +  T+N 
Sbjct: 360 FDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNE 419

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L GL REG  ++A  M+ ++  +G  L+  +Y  V+N  CQ    + A+ LL  M+ +G
Sbjct: 420 LLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQG 479

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL---- 500
             P   T N ++   CK G    AA  L  +  +       ++ +L+  +C   KL    
Sbjct: 480 IQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAM 539

Query: 501 LFAFELLDELVIKESGTIQV 520
           ++  ++L E +     T  V
Sbjct: 540 VYLLKMLYEGICPNEATWNV 559



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 168 AISTCLNLLIESNQVDLA-QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
           A+   +     +   D A + F + S+   R  P   ++N L+    +   + +   V  
Sbjct: 35  ALVAAIGAFARAGSADRALKTFYRASDLGCR-DPGVRVYNHLLDALLRENMVGAVVPVYD 93

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
            M+K+ +  PN+ TY+ LI  LC+N R   A ++ +EM S+    PD +++  ++ G C+
Sbjct: 94  NMRKAGVD-PNVYTYNLLIRALCQNDRVDAARKMLDEM-SRKGCHPDEVSHGTIVSGMCK 151

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G+V+ A+  +         P   +Y  +++  C E ++ E   V +EM    L+P+ + 
Sbjct: 152 LGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVT 206

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           YTT+++ FC+A  +  A  +L  M   GC  +++TF  ++ G   +GK+ +AL M   + 
Sbjct: 207 YTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMV 266

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
            +G   +  SY +++   C  G+L+ A++    M     LP+  T + L+     AG  +
Sbjct: 267 DEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLD 326

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF--AFELLDELVI 512
            A +    +   G KP    +  +++++C  +K++F  A  L+D++++
Sbjct: 327 GAMLIWNEMKSSGCKPNVVVYTNMIDVLC--KKMMFDQAESLIDKMLM 372


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 209/450 (46%), Gaps = 42/450 (9%)

Query: 57  SRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA 116
           SR ++   A  +IK   +P   L+ F         NH   TY  ++  L +    ++   
Sbjct: 71  SRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKI 130

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           V   M  +       I   L+  ++     +      +++H     K S    +  LN+L
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH-CYGIKVSPFVYNNLLNML 189

Query: 177 IESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK---- 230
           ++ N VD A    +   +HL     P+   FNILI+  C+ G ++ AFE  + M      
Sbjct: 190 VKQNLVDEAVLLFR---EHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCF 246

Query: 231 -SQMSY------------------------------PNLITYSTLIDGLCKNGRFREAIE 259
              +SY                              P++ITY+++I G CK G  + A E
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+EMVS   I P+  T+NVLIDGF + G +  A  + E M   GC P+V  +T+L++G+
Sbjct: 307 LFDEMVSSG-IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGY 365

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+EG++ +  ++++EMK   L P+   Y  LIN  C+  R+ EA   L+ +K        
Sbjct: 366 CREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKP 425

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N ++ G C+ GK++EA  ++ ++       +K ++ I++  +C KG + +AI     
Sbjct: 426 FIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYK 485

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           M+    +P   T N L+  L KAGM  +A+
Sbjct: 486 MIEINCVPDEITINSLISCLLKAGMPNEAS 515



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 183/335 (54%), Gaps = 9/335 (2%)

Query: 170 STCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           S+ L LL+ S     ++D A+NFL   + +  +K +  ++N L+    K+  ++ A  + 
Sbjct: 144 SSILELLVSSYARMGKLDSAKNFLNEVHCY-GIKVSPFVYNNLLNMLVKQNLVDEAVLLF 202

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
           +E  +     P++ +++ LI GLC+ G   +A E F+ M       PD ++YN LI+GFC
Sbjct: 203 REHLEPYF-VPDVYSFNILIRGLCRIGEIDKAFEFFQNM-GNFGCFPDIVSYNTLINGFC 260

Query: 286 RGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           R  ++ +   ++ E M   G +P+V  YT++++G+CK G ++ A E+FDEM +  +KP+ 
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             +  LI+ F + G +  A+ + ++M   GC  D+VTF  ++ G CREG++ + L + E+
Sbjct: 321 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEE 380

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +    +  N  +Y +++N  C++  + +A   LR +     +P     N ++   CKAG 
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELIC-RGR 498
            ++A   +  + E   +P+  ++ +L+   C +GR
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 15/307 (4%)

Query: 221 AFEVLK------------EMKKSQMSYPNLI-TYSTLIDGLCKNGRFREAIELFEEMVSK 267
           AFEV+K            E  ++ +S  +   TY  L+  LCK G    A  +F+ M S 
Sbjct: 79  AFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRS- 137

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D ILPD+    +L+  + R GK+D AK  +  +   G   + F Y  L+N   K+  + E
Sbjct: 138 DGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDE 197

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F E       PD   +  LI   CR G +D+A E  + M   GC  DIV++N ++ 
Sbjct: 198 AVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLIN 257

Query: 388 GLCREGKIEEALGML-EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           G CR  +I +   +L E +   G+  +  +Y  +++  C+ G+++ A EL   M+  G  
Sbjct: 258 GFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIK 317

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+  T N L+    K G    A +    ++ +G  P+  ++  L++  CR  ++    +L
Sbjct: 318 PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKL 377

Query: 507 LDELVIK 513
            +E+ ++
Sbjct: 378 WEEMKVR 384



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 2/167 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F  LI  +C+ G +    ++ +EMK   +S PN+ TY+ LI+ LCK  R REA  
Sbjct: 353 PDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS-PNVYTYAVLINALCKENRIREARN 411

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
               + S  +++P    YN +IDGFC+ GKVD A  I+  M+   C P+   +T L+ G 
Sbjct: 412 FLRHLKSS-EVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           C +G++ EA   F +M      PD I   +LI+C  +AG  +EA ++
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517


>gi|255548031|ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545552|gb|EEF47056.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 218/480 (45%), Gaps = 44/480 (9%)

Query: 58  RFISHGAAISLIKCEKEPQCALEIFNTVSEQ-KGFNHNNATYATILDKLARYKKFEAVDA 116
           R ++      +I+ +K P  AL IF    ++   + HN   YAT++  L    +   +  
Sbjct: 7   RLLTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGRITEMKE 66

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           VL QM  ++C+  + IF N +K ++   L    + +F  I P        ++ +T L ++
Sbjct: 67  VLDQMREDSCECKDSIFANAIKTYARVGLLNEAISLFKNI-PQFNCVNWTESFNTLLQIM 125

Query: 177 IESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
           ++ ++++ A      S+    +K      N+L+   C+    + A +V +EM   Q  YP
Sbjct: 126 VKESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEM-NYQGCYP 184

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEM---VSKDQILPDALTYNVLIDGFCRGGKVDRA 293
           +  +Y  ++ GLCK+GR  EA  L   M   +S+     D + Y + +D  C  G V++A
Sbjct: 185 DRDSYRIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGMVEQA 244

Query: 294 KKIMEFMKNNG---------------CN---------------------PNVFNYTTLMN 317
            +++  +   G               CN                     P++ +YT +  
Sbjct: 245 LEVLGKILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYTAMAV 304

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK-EMKERGCK 376
            F  EGKL +A +V DE ++   +P  + Y   +   C+ G+V EA+ +L+ EM E  C 
Sbjct: 305 DFYAEGKLSQADKVLDETQDRGFRPSLLTYEAKVAALCKEGKVHEAINVLEVEMVEGNCV 364

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLW-YDGIYLNKASYRIVLNFSCQKGELEKAIE 435
            ++  +NI+L GLC       A+  L+++    G   NK +Y I+++  CQ G   +A  
Sbjct: 365 PNVRLYNILLKGLCDARNSATAVKYLKRMAKQTGCVANKETYCILVHGLCQDGGFIEASR 424

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           +L  ML + + P   T N L+  LC  G   +A + L  ++ +   PE   W  LV  +C
Sbjct: 425 ILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEATMWLEEMISLDEAPELSVWNSLVTCLC 484



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 10/322 (3%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI-TYSTLIDGLCKNGRFREAIELFE 262
           IF   IK + + G L  A  + K +   Q +  N   +++TL+  + K  +   A  LF 
Sbjct: 82  IFANAIKTYARVGLLNEAISLFKNI--PQFNCVNWTESFNTLLQIMVKESKLEAAHRLFL 139

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           E     ++     + N+L+D  C+  + D A ++ + M   GC P+  +Y  +M G CK+
Sbjct: 140 ESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQGCYPDRDSYRIVMMGLCKD 199

Query: 323 GKLQEAKEVFDEMKNFLLKP----DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           G+L EA  +   M   + +     D + Y   ++  C  G V++ALE+L ++  +G KA 
Sbjct: 200 GRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGMVEQALEVLGKILRKGLKAP 259

Query: 379 IVTF-NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
                 + L     +G IE    ++ +    G   + +SY  +      +G+L +A ++L
Sbjct: 260 KRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYTAMAVDFYAEGKLSQADKVL 319

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL-FGLVEMGFKPESDSWALLVELICR 496
                RGF P   T    +  LCK G   +A   L   +VE    P    + +L++ +C 
Sbjct: 320 DETQDRGFRPSLLTYEAKVAALCKEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCD 379

Query: 497 GRKLLFAFELLDELVIKESGTI 518
            R    A + L  +  K++G +
Sbjct: 380 ARNSATAVKYLKRMA-KQTGCV 400



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 6/286 (2%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           QKG   +   Y   LD L      E    VL ++  +  K  +     L    SNC+   
Sbjct: 218 QKGSGEDIVIYRIFLDALCDIGMVEQALEVLGKILRKGLKAPKRCHPRL--DLSNCNSDG 275

Query: 148 RVLEMFHKIHP--ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
            +    H I+   I    PSL + +          ++  A   L    Q    +P+   +
Sbjct: 276 NIETTKHLINEALIRGAIPSLSSYTAMAVDFYAEGKLSQADKVLD-ETQDRGFRPSLLTY 334

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
              +   CK G +  A  VL+         PN+  Y+ L+ GLC       A++  + M 
Sbjct: 335 EAKVAALCKEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCDARNSATAVKYLKRMA 394

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            +   + +  TY +L+ G C+ G    A +I+E M      P V  +  L+ G C  G+ 
Sbjct: 395 KQTGCVANKETYCILVHGLCQDGGFIEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQ 454

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFC-RAGRVDEALELLKEM 370
            EA    +EM +    P+   + +L+ C C     +D   E  K +
Sbjct: 455 YEATMWLEEMISLDEAPELSVWNSLVTCLCSNTADIDACCETFKRL 500


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 183/345 (53%), Gaps = 7/345 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESA 221
           P  +  +  +  +I S ++  A+N     ++ LR  ++P    FN L+   CK   L +A
Sbjct: 112 PEARQFNMLMRDMIRSGKLASARNVF---DEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 168

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +   M K+ ++ P++ TY   I GLCK GR ++A+E+FEEM  +  + P+ +    LI
Sbjct: 169 NALRGLMAKAGIA-PDVYTYGAFIQGLCKTGRIQDAMEMFEEMCER-GLNPNTVVLTTLI 226

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C+ G V    ++   M   G   ++  Y  L+NGFC+   ++ A ++ +EM+   LK
Sbjct: 227 DAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLK 286

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + YTTLI+  C+ G +D A+E+ +EM + G   D VT+  ++ GL + G+  +A  +
Sbjct: 287 PDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERI 346

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L ++   G+  +  +Y +V++  C+ G+++   + L+ M  +G  P   T N ++   C 
Sbjct: 347 LCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCS 406

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            G  ++A + L  ++ +G  P   ++ +L++  C+  K+    EL
Sbjct: 407 LGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 451



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 154/275 (56%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    ++ L+  + ++G+   A  +F+EM+ +  + P  +T+N L+ G C+   ++ A  
Sbjct: 112 PEARQFNMLMRDMIRSGKLASARNVFDEMLRR-GVQPTVVTFNTLMSGMCKASDLNNANA 170

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M   G  P+V+ Y   + G CK G++Q+A E+F+EM    L P+T+  TTLI+  C
Sbjct: 171 LRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHC 230

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G V   LEL  EM  RG KAD+V +N ++ G CR   ++ A  ++E++  DG+  +K 
Sbjct: 231 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 290

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++GEL+ A+E+ + M   G      T   L+  L KAG + DA   L  +
Sbjct: 291 TYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEM 350

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E G +P++ ++ ++++  C+   +   F+ L E+
Sbjct: 351 MEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEM 385



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 101/207 (48%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  P    +  LM    + GKL  A+ VFDEM    ++P  + + TL++  C+A  ++ A
Sbjct: 109 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 168

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             L   M + G   D+ T+   + GLC+ G+I++A+ M E++   G+  N      +++ 
Sbjct: 169 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 228

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C++G++   +EL   M  RG        N L+   C+    + A   +  + + G KP+
Sbjct: 229 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 288

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
             ++  L++  C+  +L  A E+  E+
Sbjct: 289 KVTYTTLIDGCCKEGELDTAMEMKQEM 315



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 3/167 (1%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           ++ L+N   R   V EA      + + G   +   FN+++  + R GK+  A  + +++ 
Sbjct: 85  WSDLMN---RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEML 141

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+     ++  +++  C+  +L  A  L  LM   G  P   T    +  LCK G  +
Sbjct: 142 RRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQ 201

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           DA      + E G  P +     L++  C+   +    EL  E+  +
Sbjct: 202 DAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR 248


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 197/376 (52%), Gaps = 8/376 (2%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTY---ETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
           +  I   L +   F  V ++  QM     +T   +  I +N   H     L+++V E  H
Sbjct: 11  FGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLH 70

Query: 155 KIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
               +  +   L  +S  T ++ L ++ +   A   L+  +  L ++PN  +++ +I   
Sbjct: 71  FHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDG-LLVQPNVVMYSTIIYSL 129

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK   +  AF++  +M   ++S P++ITY+TL+ G    GR +EA+ LF +M+ K+ I P
Sbjct: 130 CKDKLVIDAFDLYSQMLLKRIS-PDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN-IKP 187

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D  T+N+L+DG C+ G++ +A+ ++  M     +P+V  Y +LM+G+    +  +A  VF
Sbjct: 188 DIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVF 247

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
           + M    + PD   Y+ +IN  C+   VDEA+ LLKEM  +    + VT++ ++ GL + 
Sbjct: 248 NTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKS 307

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
           G+I +A  ++ ++   G   +  +Y  +L+  C+  +++KAI LL  +  +G  P   T 
Sbjct: 308 GRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTY 367

Query: 453 NELLVRLCKAGMAEDA 468
             L+  LCK G  +DA
Sbjct: 368 TILVDGLCKNGRLKDA 383



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 196/396 (49%), Gaps = 59/396 (14%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
           KGF  N  +Y T++D L +  +  A   VLR +        +G+ +       N  ++  
Sbjct: 78  KGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNI--------DGLLVQ-----PNVVMYST 124

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD-LAQNFLKYS--------------N 193
           +      I+ + ++K  + A      +L++    D +  N L Y               N
Sbjct: 125 I------IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFN 178

Query: 194 QHL--RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           Q L   +KP+   FNIL+   CK G ++ A  VL  M K  +  P++ITY++L+DG    
Sbjct: 179 QMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVD-PDVITYNSLMDGYFLV 237

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            +  +A  +F  M ++  + PD  +Y+V+I+G C+   VD A  +++ M +    PN   
Sbjct: 238 KQENKATFVFNTM-ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVT 296

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y++L++G  K G++ +A ++ +EM N     D I Y +L++  C+  +VD+A+ LL ++K
Sbjct: 297 YSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIK 356

Query: 372 ERGCKADIVTFNIILGGLCREGKI---------------------EEALGMLEKLWYDGI 410
           ++G + DI T+ I++ GLC+ G++                     ++AL +L K+  +G 
Sbjct: 357 DQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGC 416

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             N  ++ I++    +    +KA+ELLR M+ RG L
Sbjct: 417 TPNPVTFEILIRALFENDMNDKAVELLREMIARGLL 452



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 166/313 (53%), Gaps = 2/313 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N   +  LI   CK G   +A +VL+ +    +  PN++ YST+I  LCK+    +A +L
Sbjct: 83  NQVSYGTLIDGLCKAGETRAAMQVLRNID-GLLVQPNVVMYSTIIYSLCKDKLVIDAFDL 141

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           + +M+ K +I PD +TYN L+ G    G++  A  +   M      P+++ +  L++G C
Sbjct: 142 YSQMLLK-RISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLC 200

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           KEG++++A+ V   M    + PD I Y +L++ +    + ++A  +   M  RG   D+ 
Sbjct: 201 KEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVH 260

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           ++++++ GLC+   ++EA+ +L+++    +  N  +Y  +++   + G +  A +L+  M
Sbjct: 261 SYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEM 320

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             RG      T N LL  LCK    + A   L  + + G +P+  ++ +LV+ +C+  +L
Sbjct: 321 HNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRL 380

Query: 501 LFAFELLDELVIK 513
             A E+   L+IK
Sbjct: 381 KDAQEVYQILLIK 393



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 140/281 (49%), Gaps = 7/281 (2%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV---DR 292
           P +  +  +   L K   F   I L  +M  +  I  D +  N+L++ FC  G+V   D+
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRG-IQTDLVNLNILVNCFCHLGQVCLNDK 64

Query: 293 AKKIMEFMKN---NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
            K+ + F  +    G   N  +Y TL++G CK G+ + A +V   +   L++P+ + Y+T
Sbjct: 65  VKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYST 124

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           +I   C+   V +A +L  +M  +    D++T+N ++ G    G+++EA+G+  ++    
Sbjct: 125 IIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN 184

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I  +  ++ I+++  C++GE++KA  +L +M+ +   P   T N L+           A 
Sbjct: 185 IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT 244

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
                +   G  P+  S+++++  +C+ + +  A  LL E+
Sbjct: 245 FVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEM 285



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 11/221 (4%)

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG---- 358
           N   P +F +  +     K         +  +M+   ++ D +    L+NCFC  G    
Sbjct: 2   NNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCL 61

Query: 359 --RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL--NK 414
             +V E L    ++  +G + + V++  ++ GLC+ G+   A+ +L  +  DG+ +  N 
Sbjct: 62  NDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNI--DGLLVQPNV 119

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
             Y  ++   C+   +  A +L   ML +   P   T N L+      G  ++A      
Sbjct: 120 VMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQ 179

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
           ++    KP+  ++ +LV+ +C+  ++  A  +L  ++IK+S
Sbjct: 180 MLLKNIKPDIYTFNILVDGLCKEGEMKKARNVL-AVMIKQS 219


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 209/450 (46%), Gaps = 42/450 (9%)

Query: 57  SRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA 116
           SR ++   A  +IK   +P   L+ F         NH   TY  ++  L +    ++   
Sbjct: 71  SRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKI 130

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           V   M  +       I   L+  ++     +      +++H     K S    +  LN+L
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH-CYGIKVSPFVYNNLLNML 189

Query: 177 IESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK---- 230
           ++ N VD A    +   +HL     P+   FNILI+  C+ G ++ AFE  + M      
Sbjct: 190 VKQNLVDEAVLLFR---EHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCF 246

Query: 231 -SQMSY------------------------------PNLITYSTLIDGLCKNGRFREAIE 259
              +SY                              P++ITY+++I G CK G  + A E
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF+EMVS   I P+  T+NVLIDGF + G +  A  + E M   GC P+V  +T+L++G+
Sbjct: 307 LFDEMVSSG-IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGY 365

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+EG++ +  ++++EMK   L P+   Y  LIN  C+  R+ EA   L+ +K        
Sbjct: 366 CREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKP 425

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N ++ G C+ GK++EA  ++ ++       +K ++ I++  +C KG + +AI     
Sbjct: 426 FIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYK 485

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           M+    +P   T N L+  L KAGM  +A+
Sbjct: 486 MIEINCVPDEITINSLISCLLKAGMPNEAS 515



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 183/335 (54%), Gaps = 9/335 (2%)

Query: 170 STCLNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           S+ L LL+ S     ++D A+NFL   + +  +K +  ++N L+    K+  ++ A  + 
Sbjct: 144 SSILELLVSSYARMGKLDSAKNFLNEVHCY-GIKVSPFVYNNLLNMLVKQNLVDEAVLLF 202

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
           +E  +     P++ +++ LI GLC+ G   +A E F+ M       PD ++YN LI+GFC
Sbjct: 203 REHLEPYF-VPDVYSFNILIRGLCRIGEIDKAFEFFQNM-GNFGCFPDIVSYNTLINGFC 260

Query: 286 RGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           R  ++ +   ++ E M   G +P+V  YT++++G+CK G ++ A E+FDEM +  +KP+ 
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
             +  LI+ F + G +  A+ + ++M   GC  D+VTF  ++ G CREG++ + L + E+
Sbjct: 321 FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEE 380

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           +    +  N  +Y +++N  C++  + +A   LR +     +P     N ++   CKAG 
Sbjct: 381 MKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELIC-RGR 498
            ++A   +  + E   +P+  ++ +L+   C +GR
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 15/307 (4%)

Query: 221 AFEVLK------------EMKKSQMSYPNLI-TYSTLIDGLCKNGRFREAIELFEEMVSK 267
           AFEV+K            E  ++ +S  +   TY  L+  LCK G    A  +F+ M S 
Sbjct: 79  AFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRS- 137

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           D ILPD+    +L+  + R GK+D AK  +  +   G   + F Y  L+N   K+  + E
Sbjct: 138 DGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDE 197

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A  +F E       PD   +  LI   CR G +D+A E  + M   GC  DIV++N ++ 
Sbjct: 198 AVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLIN 257

Query: 388 GLCREGKIEEALGML-EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           G CR  +I +   +L E +   G+  +  +Y  +++  C+ G+++ A EL   M+  G  
Sbjct: 258 GFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIK 317

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+  T N L+    K G    A +    ++ +G  P+  ++  L++  CR  ++    +L
Sbjct: 318 PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKL 377

Query: 507 LDELVIK 513
            +E+ ++
Sbjct: 378 WEEMKVR 384



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 2/167 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   F  LI  +C+ G +    ++ +EMK   +S PN+ TY+ LI+ LCK  R REA  
Sbjct: 353 PDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS-PNVYTYAVLINALCKENRIREARN 411

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
               + S  +++P    YN +IDGFC+ GKVD A  I+  M+   C P+   +T L+ G 
Sbjct: 412 FLRHLKSS-EVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           C +G++ EA   F +M      PD I   +LI+C  +AG  +EA ++
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 205/408 (50%), Gaps = 6/408 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EIF++++  KG   +  +Y T+L   A    F  +  +   M          +F  L+
Sbjct: 389 AAEIFDSMTA-KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILI 447

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             ++   + +  + +F ++       P +   ST ++    S    L     K++    R
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQ-QGVSPDVVTYSTVISAF--SRMGRLTDAMEKFNQMVAR 504

Query: 198 -LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            ++PNT +++ +I+  C  G L  A E++ EM    +  P+++ ++++I+ LCK+GR  +
Sbjct: 505 GIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++F+ +V+     PD +T+  LIDG+C  GK+D+A KI++ M+  G   ++  Y+TL+
Sbjct: 565 AHDIFD-LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+ K G++ +   +F EM+   +KP+T+ Y  ++    RAGR   A +   EM E G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             +  + IILGGLCR    +EA+ + +KL    +  +      ++N   +    E+A EL
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
              +   G LP+ +T   +++ L K G  EDA      + + G  P S
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGS 791



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 184/366 (50%), Gaps = 10/366 (2%)

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           +L    KIH IT         ST L  L  +N+ + A N L +    L   PN   ++I+
Sbjct: 183 ILRTGLKIHQIT--------ASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSII 234

Query: 209 IKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           +K  C     + A ++ + M K+     PN++ Y+T+I G  K G   +A  LF EM ++
Sbjct: 235 LKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEM-TR 293

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             + PD +TYN++ID  C+   +D+A+ ++  M  NG  P+   Y  +++G+   G+L+E
Sbjct: 294 QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKE 353

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++F +MK+  L P+ +   + +   C+ GR  EA E+   M  +G K DIV++  +L 
Sbjct: 354 AAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLH 413

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           G   EG   + +G+   +  +GI  +   + I+++   ++G ++ A+ +   M  +G  P
Sbjct: 414 GYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSP 473

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T + ++    + G   DA      +V  G +P +  +  +++  C    L+ A EL+
Sbjct: 474 DVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELV 533

Query: 508 DELVIK 513
            E++ K
Sbjct: 534 SEMINK 539



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 227/445 (51%), Gaps = 15/445 (3%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE-AVDAVLRQMTYETCKFHEG 131
           + P   L +F  +  + G   +  T +T+L  L    + E AV+ +L +M+   C  +  
Sbjct: 171 RRPDLGLVLFGCI-LRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVF 229

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITRE----KPSLKAISTCLNLLIESNQVDLAQN 187
            +  ++K   + S+ +R L++F  +    +E     P++ A +T ++   +  +   A +
Sbjct: 230 SYSIILKGLCDNSMSQRALDLFQMM---AKEGGACSPNVVAYNTVIHGFFKEGETGKACS 286

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
                 +   +KP+   +N++I   CK   ++ A  VL++M  +  + P+ +TY+ +I G
Sbjct: 287 LFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQMT-TNGAQPDTVTYNCMIHG 344

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
               GR +EA ++F +M S+  ++P+ +  N  +   C+ G+   A +I + M   G  P
Sbjct: 345 YATLGRLKEAAKMFRKMKSRG-LIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKP 403

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           ++ +Y TL++G+  EG   +   +F+ MK+  +  D   +  LI+ + + G VD+A+ + 
Sbjct: 404 DIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIF 463

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM+++G   D+VT++ ++    R G++ +A+    ++   GI  N A Y  ++   C  
Sbjct: 464 TEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMH 523

Query: 428 GELEKAIELLRLMLCRGF-LPHYATSNELLVRLCKAGMAEDAAIALFGLV-EMGFKPESD 485
           G L KA EL+  M+ +G   P     N ++  LCK G   DA   +F LV ++G +P+  
Sbjct: 524 GGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAH-DIFDLVTDIGERPDVI 582

Query: 486 SWALLVELICRGRKLLFAFELLDEL 510
           ++  L++  C   K+  AF++LD +
Sbjct: 583 TFTSLIDGYCLVGKMDKAFKILDAM 607



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 209/486 (43%), Gaps = 79/486 (16%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E E   A  +F+ ++ Q G   +  TY  I+D L + +  +  + VLRQMT    +    
Sbjct: 278 EGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            +        NC        M H    + R K                   + A+ F K 
Sbjct: 337 TY--------NC--------MIHGYATLGRLK-------------------EAAKMFRKM 361

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
            ++ L   PN  I N  +   CK G  + A E+   M  ++   P++++Y TL+ G    
Sbjct: 362 KSRGL--IPNIVICNSFLASLCKHGRSKEAAEIFDSMT-AKGHKPDIVSYCTLLHGYASE 418

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G F + I LF  M S + I  D   +N+LI  + + G VD A  I   M+  G +P+V  
Sbjct: 419 GWFADMIGLFNSMKS-NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477

Query: 312 YTTLMN-----------------------------------GFCKEGKLQEAKEVFDEMK 336
           Y+T+++                                   GFC  G L +AKE+  EM 
Sbjct: 478 YSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMI 537

Query: 337 N-FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           N  + +PD + + ++IN  C+ GRV +A ++   + + G + D++TF  ++ G C  GK+
Sbjct: 538 NKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKM 597

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           ++A  +L+ +   G+  +  +Y  +L+   + G +   + L R M  +G  P+  T   +
Sbjct: 598 DKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR---GRKLLFAFELLDELVI 512
           L  L +AG    A      ++E G       + +++  +CR     + +  F+ L  + +
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNV 717

Query: 513 KESGTI 518
           K S TI
Sbjct: 718 KFSITI 723



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 179/390 (45%), Gaps = 12/390 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IF T  +Q+G + +  TY+T++   +R  +         QM     + +  ++ +++
Sbjct: 459 AMLIF-TEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSII 517

Query: 138 K----HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           +    H       E V EM +K  P    +P +   ++ +N L +  +V  A +      
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIP----RPDIVFFNSVINSLCKDGRVMDAHDIFDLVT 573

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
             +  +P+   F  LI  +C  G ++ AF++L  M+   +   +++TYSTL+DG  KNGR
Sbjct: 574 D-IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVE-TDIVTYSTLLDGYFKNGR 631

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             + + LF EM  K  + P+ +TY +++ G  R G+   A+K    M  +G    V  Y 
Sbjct: 632 INDGLTLFREMQRKG-VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++ G C+     EA  +F ++    +K       T+IN   +  R +EA EL   +   
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   +  T+ +++  L ++G +E+A  M   +   GI         ++    +KGE+ KA
Sbjct: 751 GLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAG 463
              L  +  +  L   +T++ +L    + G
Sbjct: 811 GNYLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 44/279 (15%)

Query: 257 AIELFEEMVSKDQILPDAL-----TYNVLIDGFCRGGKVD-------------------- 291
           A+ LF   V ++Q  P  +     TY++L+D  CR  + D                    
Sbjct: 136 ALALFNR-VCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQIT 194

Query: 292 ----------------RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
                               ++  M   GC PNVF+Y+ ++ G C     Q A ++F  M
Sbjct: 195 ASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMM 254

Query: 336 --KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
             +     P+ + Y T+I+ F + G   +A  L  EM  +G K D+VT+N+I+  LC+  
Sbjct: 255 AKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKAR 314

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            +++A  +L ++  +G   +  +Y  +++     G L++A ++ R M  RG +P+    N
Sbjct: 315 AMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICN 374

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
             L  LCK G +++AA     +   G KP+  S+  L+ 
Sbjct: 375 SFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLH 413



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG-MLEKL 405
           Y+ L++C CRA R D  L L   +   G K   +T + +L  LC   + EEA+  +L ++
Sbjct: 160 YSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRM 219

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL--PHYATSNELLVRLCKAG 463
              G   N  SY I+L   C     ++A++L ++M   G    P+    N ++    K G
Sbjct: 220 SELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEG 279

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
               A      +   G KP+  ++ L+++ +C+ R +  A     ELV+++  T
Sbjct: 280 ETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKA-----ELVLRQMTT 328


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 166/305 (54%), Gaps = 3/305 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P +   +  LN + +  +VD A  FL+    +   +PNT  +NI++K        E A +
Sbjct: 14  PDIITYNVVLNGICQEGRVDDAMEFLENLPSYGG-EPNTVSYNIVLKGLFTAERWEDAEK 72

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +++EM       PN++T++ LI  LC+ G    A+E+ E+ + K    P++L+YN L+  
Sbjct: 73  LMEEMAHKGCP-PNVVTFNMLISFLCRRGLVEPAMEVLEQ-IPKYGCTPNSLSYNPLLHA 130

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           FC+  K+D+A   +E M + GC P++ +Y TL+   C+ G++  A ++  ++K     P 
Sbjct: 131 FCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPV 190

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y T+I+   +AG+  EALELL EM  +G + DI+T+  I  GLCRE KIEEA+    
Sbjct: 191 LISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFC 250

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+   GI      Y  +L   C++ E   AI+L   M+  G +P+ +T   L+  L   G
Sbjct: 251 KVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEG 310

Query: 464 MAEDA 468
           + ++A
Sbjct: 311 LVKEA 315



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 163/294 (55%), Gaps = 4/294 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N+++   C+ G ++ A E L+ +  S    PN ++Y+ ++ GL    R+ +A +
Sbjct: 14  PDIITYNVVLNGICQEGRVDDAMEFLENLP-SYGGEPNTVSYNIVLKGLFTAERWEDAEK 72

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L EEM  K    P+ +T+N+LI   CR G V+ A +++E +   GC PN  +Y  L++ F
Sbjct: 73  LMEEMAHKG-CPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAF 131

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK+ K+ +A    + M +    PD + Y TL+   CR G VD A++LL ++K +GC   +
Sbjct: 132 CKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVL 191

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           +++N ++ GL + GK +EAL +L+++   G+  +  +Y  + +  C++ ++E+AI     
Sbjct: 192 ISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCK 251

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVE 492
           +   G  P     N +L+ LCK     + AI LF  ++  G  P   ++ +LVE
Sbjct: 252 VQDMGIRPTVVLYNAILLGLCKRRETHN-AIDLFSYMISNGCMPNESTYTILVE 304



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 163/290 (56%), Gaps = 2/290 (0%)

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            ++L EM+    + P++ITY+ +++G+C+ GR  +A+E  E + S     P+ ++YN+++
Sbjct: 1   MKLLDEMRDKGCA-PDIITYNVVLNGICQEGRVDDAMEFLENLPSYGG-EPNTVSYNIVL 58

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G     + + A+K+ME M + GC PNV  +  L++  C+ G ++ A EV +++  +   
Sbjct: 59  KGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCT 118

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+++ Y  L++ FC+  ++D+A+  ++ M  RGC  DIV++N +L  LCR G+++ A+ +
Sbjct: 119 PNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDL 178

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L +L   G      SY  V++   + G+ ++A+ELL  M+ +G  P   T   +   LC+
Sbjct: 179 LHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCR 238

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
               E+A      + +MG +P    +  ++  +C+ R+   A +L   ++
Sbjct: 239 EDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMI 288



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 128/219 (58%)

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           K+++ M++ GC P++  Y  ++NG C+EG++ +A E  + + ++  +P+T+ Y  ++   
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
             A R ++A +L++EM  +GC  ++VTFN+++  LCR G +E A+ +LE++   G   N 
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            SY  +L+  C++ +++KA+  + LM+ RG  P   + N LL  LC+ G  + A   L  
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           L   G  P   S+  +++ + +  K   A ELLDE++ K
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISK 220



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 125/250 (50%), Gaps = 35/250 (14%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK------------------------ 230
           H    PN   FN+LI   C+RG +E A EVL+++ K                        
Sbjct: 79  HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 138

Query: 231 ----------SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
                     S+  YP++++Y+TL+  LC+NG    AI+L  ++  K    P  ++YN +
Sbjct: 139 KAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKG-CSPVLISYNTV 197

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG  + GK   A ++++ M + G  P++  YTT+ +G C+E K++EA   F ++++  +
Sbjct: 198 IDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGI 257

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           +P  + Y  ++   C+      A++L   M   GC  +  T+ I++ GL  EG ++EA  
Sbjct: 258 RPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARD 317

Query: 401 MLEKLWYDGI 410
           +L +L   G+
Sbjct: 318 LLGQLCSRGV 327


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 225/487 (46%), Gaps = 81/487 (16%)

Query: 100 TILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPI 159
            ++DKL + ++F   + + R M     + +E  +  L+       + +  L MF ++   
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRM--- 396

Query: 160 TREKP---SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
            REK    ++   ++ +N   + +    A+  L    +   L P+   ++ LI   C++G
Sbjct: 397 -REKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK-GLAPSAASYSPLIAGLCRKG 454

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
            L SA E+ +EM ++ +S  N+ T++TLI G CK+G   EA  LF++M+    ++P+ +T
Sbjct: 455 DLASAMELHREMARNGVS-GNVYTFTTLISGFCKDGNMDEAARLFDKMIDS-SVVPNEVT 512

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP----------------------------- 307
           +NV+I+G+CR G V +A ++ + M + G  P                             
Sbjct: 513 FNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLE 572

Query: 308 ------NVFNYTTLMNGFCKEGKLQEAKEVFD---------------------------- 333
                 N F+ TTLM GFCKEG+L E   ++D                            
Sbjct: 573 NNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGE 632

Query: 334 -------EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
                  EMK   +KPD + +T +I+   +   + +AL    +M   GC  ++VT+ +++
Sbjct: 633 KISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLI 692

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             LC+ G +  A  + E++       N  +Y   L+F   +GELEKA ++L   +  G L
Sbjct: 693 NHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCL 751

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
            +  T N L+   CKAG  + A   +    E GF P+  S++ ++  +C+   +  AF+L
Sbjct: 752 ANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQL 811

Query: 507 LDELVIK 513
            +E++ K
Sbjct: 812 WNEMLYK 818



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 165/314 (52%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +K +   +N+L+   C+   +  A EV   M +  +   + +TY TL+ G C+      A
Sbjct: 226 VKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGI-VADEVTYRTLVYGFCRTEELEMA 284

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +E+ ++M+S    +P   + + ++DG  + G +D+A ++   +   G  PN+F    L++
Sbjct: 285 LEMTDDMLSL-HFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALID 343

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK+ + +EA+ +F  M N  L+P+ + Y  LI+  C+ G +D+AL +   M+E+G + 
Sbjct: 344 KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRV 403

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            +  +N ++ G C+     +A G+L ++   G+  + ASY  ++   C+KG+L  A+EL 
Sbjct: 404 TVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELH 463

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           R M   G   +  T   L+   CK G  ++AA     +++    P   ++ +++E  CR 
Sbjct: 464 REMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRV 523

Query: 498 RKLLFAFELLDELV 511
             +  AF+L D++V
Sbjct: 524 GNVRKAFQLYDQMV 537



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 151/306 (49%), Gaps = 2/306 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  L+   C+   LE A E+  +M       P++ + S ++DGL K G   +A  L   +
Sbjct: 268 YRTLVYGFCRTEELEMALEMTDDMLSLHF-VPSVASCSFMVDGLRKRGHIDKAFRLACHL 326

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
             +  ++P+    N LID  C+  +   A+++   M N G  PN   Y  L++  CK G 
Sbjct: 327 -GELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGM 385

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           + +A  +FD M+   ++     Y +LIN +C+     +A  LL EM E+G      +++ 
Sbjct: 386 MDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSP 445

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ GLCR+G +  A+ +  ++  +G+  N  ++  +++  C+ G +++A  L   M+   
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +P+  T N ++   C+ G    A      +V+ G  P++ ++  L+ ++C     + A 
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAK 565

Query: 505 ELLDEL 510
           E +D+L
Sbjct: 566 EFVDDL 571



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 3/208 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP+      +I  H K   +  A     +M     S PN++TY+ LI+ LCK+G    A
Sbjct: 646 VKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCS-PNVVTYTVLINHLCKSGYLSSA 704

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L EEM+   + LP++ TYN  +D     G++++AK ++      GC  N   + TL+ 
Sbjct: 705 QILCEEMLVG-RFLPNSFTYNCFLDFLANEGELEKAK-VLHATILEGCLANTVTFNTLIK 762

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCK G++Q A ++          PD I Y+T+IN  C+ G +++A +L  EM  +G K 
Sbjct: 763 GFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKP 822

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKL 405
           DIV +NI++      G+ ++ LG+   +
Sbjct: 823 DIVAYNILIRWCNIHGEFDKGLGIYSDM 850



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 145/343 (42%), Gaps = 72/343 (20%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID------------- 246
           PN   FN++I+ +C+ G +  AF++  +M    ++ P+  TY +LI              
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLT-PDNYTYRSLISVLCLTLGAMKAKE 566

Query: 247 ----------------------GLCKNGRFREAIELFEEMVSKDQIL------------- 271
                                 G CK GR  E   +++EM ++   L             
Sbjct: 567 FVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAAL 626

Query: 272 ---------------------PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
                                PD + +  +ID   +   + +A    + M  +GC+PNV 
Sbjct: 627 KLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVV 686

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            YT L+N  CK G L  A+ + +EM      P++  Y   ++     G +++A  L   +
Sbjct: 687 TYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATI 746

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            E GC A+ VTFN ++ G C+ G+I+ A+ +++     G + +  SY  ++N  C+ G++
Sbjct: 747 LE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDI 805

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
            KA +L   ML +G  P     N +L+R C      D  + ++
Sbjct: 806 NKAFQLWNEMLYKGLKPDIVAYN-ILIRWCNIHGEFDKGLGIY 847



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 1/274 (0%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T S ++  L K  +F  A +LF+EMV     L D   Y   I  +C    +D A+ ++  
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQCKFPL-DEYVYTAGIRAYCEIRNLDGARGLLTR 220

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M++ G   +   Y  LM G C+  ++ EA EV + M    +  D + Y TL+  FCR   
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           ++ ALE+  +M        + + + ++ GL + G I++A  +   L   G+  N  +   
Sbjct: 281 LEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNA 340

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +++  C+     +A  L R M  RG  P+  T   L+  LCK GM +DA      + E G
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +     +  L+   C+      A  LL+E+V K
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK 434



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 34/178 (19%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEM-------------------------KKSQMS 234
           PN   + +LI H CK G L SA  + +EM                         +K+++ 
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVL 742

Query: 235 YP--------NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
           +         N +T++TLI G CK G+ + AI+L +   ++    PD ++Y+ +I+  C+
Sbjct: 743 HATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN-TESGFFPDCISYSTIINELCK 801

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
            G +++A ++   M   G  P++  Y  L+      G+  +   ++ +M N     DT
Sbjct: 802 VGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADDT 859


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 178/342 (52%), Gaps = 1/342 (0%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +T L  L  + + D A + L +    L   P+   +N +IK  C     + A ++L  M 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           K     P++++Y+ +I GL   G   +A  LF EMV K  ++P+ +TYN ++   C+   
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKG-VVPNVVTYNSIVHALCKARA 322

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           +D+A+ ++  M +N   P+   YT +++G+   G+ +EA ++F EM    L PD + + +
Sbjct: 323 MDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNS 382

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           L++  C+  R  EA E+   +  +G K DI++++I+L G   EG+  +   +   +  +G
Sbjct: 383 LMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNG 442

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I  +   + I++N   ++G +++A+ +   M  +G  P+  T   ++  LC+ G   DA 
Sbjct: 443 IVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAM 502

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             L  ++ +G KP +  +  L++  C    L+ A EL+ E++
Sbjct: 503 EKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 228/505 (45%), Gaps = 80/505 (15%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S+   I  +  E E   A  +FN +  QKG   N  TY +I+  L + +  +  + VLR
Sbjct: 273 VSYTMVIHGLFMEGEISKACNLFNEMV-QKGVVPNVVTYNSIVHALCKARAMDKAELVLR 331

Query: 120 QM----------TYETCKFH--------------------EGI------FLNLMKHFSNC 143
           QM          TY T   H                    EG+      F +LM      
Sbjct: 332 QMFDNSIQPDEVTY-TAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKH 390

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLN-LLIESNQVDLAQNFLKYSNQHLRLKPNT 202
              +   E+FH I      KP + + S  L+    E   VD+  N L +S     +  ++
Sbjct: 391 KRSKEAAEIFHSI-ATKGHKPDIISYSILLHGYATEGRFVDM--NNLFHSMTDNGIVADS 447

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             FNILI  H KRG ++ A  +  EM+   +S PN++TY+T+I  LC+ GR  +A+E   
Sbjct: 448 HCFNILINAHAKRGMMDEALLIFTEMRGQGVS-PNVVTYATVIAALCRMGRLADAMEKLS 506

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG----------------CN 306
           +M+S   + P+ + Y+ LI GFC  G + +AK+++  M + G                CN
Sbjct: 507 QMISIG-LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCN 565

Query: 307 --------------------PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
                               P++F + +L++G+C  GK+ +A  V D M +   +PD + 
Sbjct: 566 EGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVT 625

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           Y+TLIN + ++GR+D+ L L +EM  +  K   VT++++L GL R G+   A  M  ++ 
Sbjct: 626 YSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMI 685

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G  ++ ++Y I+L   C+    ++AI L   +         A  N ++  L K    E
Sbjct: 686 ESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRRE 745

Query: 467 DAAIALFGLVEMGFKPESDSWALLV 491
           +A      +   G  P + ++ +++
Sbjct: 746 EAHDLFASVSASGLVPNASTYGVMI 770



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 175/360 (48%), Gaps = 12/360 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL IF  +  Q G + N  TYAT++  L R  +       L QM     K +  ++ +L+
Sbjct: 466 ALLIFTEMRGQ-GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLI 524

Query: 138 KHFSN----CSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           + F          E V EM  +  P    +P++   S+ ++ L    +V  AQ+      
Sbjct: 525 QGFCTHGDLIKAKELVSEMMDQGIP----RPNITFFSSIIHSLCNEGRVMNAQDVFNLV- 579

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            H+  +P+   FN LI  +C  G ++ AF VL  M  S  + P+++TYSTLI+G  K+GR
Sbjct: 580 IHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMV-SAGTEPDVVTYSTLINGYFKSGR 638

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             + + LF EM+ K ++ P  +TY++++DG  R G+   AKK+   M  +G   ++  YT
Sbjct: 639 IDDGLILFREMLCK-RVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYT 697

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++ G C+     EA  +F ++    LK +     T+I+   +  R +EA +L   +   
Sbjct: 698 IILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSAS 757

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   +  T+ +++  L +EG +EEA  M   +   G   +      ++    QKGE+ KA
Sbjct: 758 GLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 208/464 (44%), Gaps = 42/464 (9%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
            K  + A EIF++++  KG   +  +Y+ +L   A   +F  ++ +   MT         
Sbjct: 390 HKRSKEAAEIFHSIA-TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSH 448

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            F  L+   +   + +  L +F ++       P++   +T +  L    +  LA    K 
Sbjct: 449 CFNILINAHAKRGMMDEALLIFTEMRG-QGVSPNVVTYATVIAALCRMGR--LADAMEKL 505

Query: 192 SNQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           S    + LKPNT +++ LI+  C  G L  A E++ EM    +  PN+  +S++I  LC 
Sbjct: 506 SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCN 565

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            GR   A ++F  ++      PD  T+N LIDG+C  GK+D+A  +++ M + G  P+V 
Sbjct: 566 EGRVMNAQDVFNLVIHIGD-RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVV 624

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR----------- 359
            Y+TL+NG+ K G++ +   +F EM    +KP T+ Y+ +++   RAGR           
Sbjct: 625 TYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEM 684

Query: 360 ------------------------VDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
                                    DEA+ L  ++     K +I   N ++  L +  + 
Sbjct: 685 IESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRR 744

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
           EEA  +   +   G+  N ++Y +++    ++G +E+A  +   M   G  P     N++
Sbjct: 745 EEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDI 804

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC-RGR 498
           +  L + G    A   +  +       E+ + +LL+ L   +GR
Sbjct: 805 IRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGR 848



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 6/263 (2%)

Query: 257 AIELFEEMVSKD---QILPDAL-TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           A+ LF  +  ++   +++P  + TY +L+D  CR  + D        +   G   +    
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 313 TTLMNGFCKEGKLQEA-KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM- 370
            T +   C   +  EA   +   M      PD   Y T+I   C   R  EAL++L  M 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           K  GC  D+V++ +++ GL  EG+I +A  +  ++   G+  N  +Y  +++  C+   +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           +KA  +LR M      P   T   ++      G  ++AA     +   G  P+  ++  L
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 491 VELICRGRKLLFAFELLDELVIK 513
           ++ +C+ ++   A E+   +  K
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATK 406



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 105/241 (43%), Gaps = 40/241 (16%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   ST +N   +S ++D   + L    + L  R+KP T  +++++    + G   +
Sbjct: 620 EPDVVTYSTLINGYFKSGRID---DGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSA 676

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM---------------- 264
           A ++  EM +S  +  ++ TY+ ++ GLC+N    EAI LF ++                
Sbjct: 677 AKKMFHEMIESGTAM-SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMI 735

Query: 265 ------------------VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
                             VS   ++P+A TY V+I    + G V+ A  +   M+  GC 
Sbjct: 736 HALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCA 795

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P+      ++    ++G++ +A     ++   ++  +    + LI+ F   GR  E ++ 
Sbjct: 796 PSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKF 855

Query: 367 L 367
           L
Sbjct: 856 L 856


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 175/309 (56%), Gaps = 3/309 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+     RG +     + +   + ++  P++ +++ +I G+C+ G+ ++A+EL E M
Sbjct: 216 YNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERM 275

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNGFCKEG 323
            ++    PD +T+N+++DG CR  +V R  +++  ++ +G C PNV  +T++++G+CK G
Sbjct: 276 -NEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 334

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           KL++A  V+++M    + P+T+ Y  LIN + + G +  A+E+ ++M    C  D+VTF+
Sbjct: 335 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 394

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLMLC 442
            ++ G CR G++++AL +   +    I  N  ++ I+++  C++   ++AI LL  L L 
Sbjct: 395 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLR 454

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
               P     N ++  LCK G  ++A +   G+ E G +P+  ++ +L+   C   ++  
Sbjct: 455 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 514

Query: 503 AFELLDELV 511
           A     E+V
Sbjct: 515 AIMFFHEMV 523



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 195/391 (49%), Gaps = 3/391 (0%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ ++   G++ +    + ++         +A   +L + +   C+     +  LM
Sbjct: 161 ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLM 220

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                      V+ +F +        P + + +  +  +    QV  A   ++  N+   
Sbjct: 221 SSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNE-FG 279

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+T   NI++   C+   +    EVL+ +++  +  PN++T++++I G CK G+  +A
Sbjct: 280 CSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDA 339

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + ++ +MV+   I+P+ +TYNVLI+G+ + G +  A ++ + M    C P+V  +++L++
Sbjct: 340 MAVYNDMVASG-IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLID 398

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCK 376
           G+C+ G+L +A  ++ +M    ++P+   ++ +I+  C+  R DEA+ LL E+  R    
Sbjct: 399 GYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIA 458

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
                +N ++  LC+ GK++EA  + + +   G   +K +Y I++   C K  + +AI  
Sbjct: 459 PQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMF 518

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
              M+  G  P   T N  +  L KAGM  +
Sbjct: 519 FHEMVEAGCSPDSITVNCFISCLLKAGMPNE 549



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 160/303 (52%), Gaps = 3/303 (0%)

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           D+   F ++    L   P+   FN++IK  C+ G ++ A E+++ M +   S P+ +T++
Sbjct: 231 DVVALFERWIQDRL-YSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCS-PDTVTHN 288

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            ++DGLC+        E+   +      +P+ +T+  +I G+C+ GK++ A  +   M  
Sbjct: 289 IIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVA 348

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
           +G  PN   Y  L+NG+ K G L  A EV+ +M      PD + +++LI+ +CR G++D+
Sbjct: 349 SGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDD 408

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVL 421
           AL +  +M +   + ++ TF+II+  LC++ + +EA+ +L +L     I      Y  V+
Sbjct: 409 ALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVI 468

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+ G++++A  + + M  +G  P   T   L++  C      +A +    +VE G  
Sbjct: 469 DVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCS 528

Query: 482 PES 484
           P+S
Sbjct: 529 PDS 531



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 145/295 (49%), Gaps = 3/295 (1%)

Query: 219 ESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            SA  V   +  S +S  P+  +   +I  LC++GR  +A++LF++M +     PDA   
Sbjct: 122 SSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 181

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE-MK 336
           + L+        +D +  ++      GC    + Y  LM+     G++ +   +F+  ++
Sbjct: 182 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 241

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           + L  PD   +  +I   CR G+V +ALEL++ M E GC  D VT NII+ GLCR  ++ 
Sbjct: 242 DRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVS 301

Query: 397 EALGMLEKLWYDGIYL-NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
               +L +L  DG+ + N  ++  V++  C+ G+LE A+ +   M+  G +P+  T N L
Sbjct: 302 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 361

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +    K G    A      +  +   P+  +++ L++  CR  +L  A  +  ++
Sbjct: 362 INGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDM 416



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 11/297 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-TCKFHEGIFL 134
           Q ALE+   ++E  G + +  T+  I+D L R  +      VLR++  +  C  +   F 
Sbjct: 266 QKALELVERMNE-FGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFT 324

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYS 192
           +++  +      E  + +++ +         +   +   N+LI       DL      Y 
Sbjct: 325 SVISGYCKAGKLEDAMAVYNDM-----VASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 379

Query: 193 NQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
               LR  P+   F+ LI  +C+ G L+ A  +  +M + ++  PN+ T+S +I  LCK 
Sbjct: 380 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQ-PNVYTFSIIIHSLCKQ 438

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R  EAI L  E+  +  I P A  YN +ID  C+ GKVD A  I + M+  GC P+ + 
Sbjct: 439 NRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYT 498

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           YT L+ G+C + ++ EA   F EM      PD+I     I+C  +AG  +E   +++
Sbjct: 499 YTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 555


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 211/453 (46%), Gaps = 51/453 (11%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+L  L   K++E  + ++ +M    C  +E  F   ++ F    L +  +++  ++
Sbjct: 212 TYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERM 271

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
            P     P +   ST +N   E  +VD A   L      +  KPNT  +N  +K  C   
Sbjct: 272 -PRYGCTPDVVIYSTLVNGFSEQGRVDDALVLL----NTMLCKPNTVCYNAALKGLCMAE 326

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
             +   E++ EM +     PN  T+S L   LC++G    A+E+ E+M  K    PD + 
Sbjct: 327 RWKDVGELIAEMVRKDCP-PNEATFSMLTSCLCQHGLVDCAMEVVEQM-QKYGCRPDVVI 384

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT---------------------- 314
           YN LI+ F   G+VD A  +++ M    CNP+  ++                        
Sbjct: 385 YNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQML 441

Query: 315 -------------LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
                        L++  C+ G +  A EVF++M  +   PD + Y++LIN F   G V+
Sbjct: 442 REDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVE 501

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A+EL + M    CK DI ++N +L GLCR  + E+A  ++  +       N+ ++ I++
Sbjct: 502 SAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILI 558

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N  CQKG  ++AIE+ + M   G  P   T N L+    + G  +D   AL  L  M  K
Sbjct: 559 NSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDD---ALNLLSTMSCK 615

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           P++ S+   ++ +CR  +   A E++ E++ K+
Sbjct: 616 PDAISYNSTLKGLCRAERWKEAEEIVAEMLRKK 648



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 165/315 (52%), Gaps = 12/315 (3%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N L+  +C+ G L  A  VL+  K S  +  N++TY+ LI+G C++GR  +A+ L   M 
Sbjct: 148 NTLVAGYCRDGRLADAERVLEAAKVSGAA--NVVTYTALINGYCRSGRLADALNLIASM- 204

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
               + PD  TYN ++ G C   + ++A+++ME M  N C+PN   + T +  FC+ G L
Sbjct: 205 ---PVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLL 261

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A ++ + M  +   PD + Y+TL+N F   GRVD+AL LL  M    CK + V +N  
Sbjct: 262 DHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAA 318

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L GLC   + ++   ++ ++       N+A++ ++ +  CQ G ++ A+E++  M   G 
Sbjct: 319 LKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGC 378

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P     N L+    + G  +D   AL  L  M   P++ S+   ++ +CR  +     E
Sbjct: 379 RPDVVIYNTLINYFSEQGRVDD---ALMLLDSMLCNPDTISFNAALKALCRTERWYDVEE 435

Query: 506 LLDELVIKESGTIQV 520
           L+ +++ ++   I++
Sbjct: 436 LIAQMLREDCPLIEM 450



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 177/367 (48%), Gaps = 16/367 (4%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N   Y   L  L   ++++ V  ++ +M  + C  +E  F  L        L +  +E+ 
Sbjct: 311 NTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVV 370

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            ++      +P +   +T +N   E  +VD A   L      +   P+T  FN  +K  C
Sbjct: 371 EQMQKYGC-RPDVVIYNTLINYFSEQGRVDDALMLL----DSMLCNPDTISFNAALKALC 425

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           +        E++ +M +       + T++ LID LC++G    AIE+FE+M  K +  PD
Sbjct: 426 RTERWYDVEELIAQMLREDCPLIEM-TFNILIDSLCQHGLVNHAIEVFEQM-PKYRCTPD 483

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
            +TY+ LI+GF   G V+ A ++ + M    C P++F+Y  ++ G C+  + ++A E+  
Sbjct: 484 IVTYSSLINGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIA 540

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            M      P+ I +  LIN  C+ G  D A+E+ K+M E G   DI T+N ++ G   +G
Sbjct: 541 NMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQG 600

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT-- 451
           ++++AL +L  +       +  SY   L   C+    ++A E++  ML +   P+  T  
Sbjct: 601 RLDDALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFK 657

Query: 452 -SNELLV 457
            +N+L +
Sbjct: 658 YANQLFI 664



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 171/351 (48%), Gaps = 40/351 (11%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+T  +N ++K  C     E A E+++EM ++   +PN +T++T I   C+NG   
Sbjct: 204 MPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNN-CHPNEVTFATQIRSFCQNGLLD 262

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            A++L E M  +    PD + Y+ L++GF   G+VD A  ++  M    C PN   Y   
Sbjct: 263 HAVQLLERM-PRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAA 318

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           + G C   + ++  E+  EM      P+   ++ L +C C+ G VD A+E++++M++ GC
Sbjct: 319 LKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGC 378

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKL---------------------WYD------ 408
           + D+V +N ++     +G++++AL +L+ +                     WYD      
Sbjct: 379 RPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEELIA 438

Query: 409 -----GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
                   L + ++ I+++  CQ G +  AIE+   M      P   T + L+    + G
Sbjct: 439 QMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQG 498

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           + E +AI LF    M  KP+  S+  +++ +CR  +   A EL+  +  K+
Sbjct: 499 LVE-SAIELFQ--SMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKD 546



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 154/293 (52%), Gaps = 11/293 (3%)

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           L++A  ++  M  S+   P +I  + LI  LC + R  +A  + + +  K+    DA+++
Sbjct: 92  LDAALRLVGSMPSSEP--PAVIACNILIKKLCAHRRLADAERVLDAL--KESGSADAVSH 147

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N L+ G+CR G++  A++++E  K +G   NV  YT L+NG+C+ G+L +A  +   M  
Sbjct: 148 NTLVAGYCRDGRLADAERVLEAAKVSGA-ANVVTYTALINGYCRSGRLADALNLIASMP- 205

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             + PDT  Y T++   C A + ++A EL++EM    C  + VTF   +   C+ G ++ 
Sbjct: 206 --VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDH 263

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A+ +LE++   G   +   Y  ++N   ++G ++ A+ LL  MLC+   P+    N  L 
Sbjct: 264 AVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCK---PNTVCYNAALK 320

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            LC A   +D    +  +V     P   ++++L   +C+   +  A E+++++
Sbjct: 321 GLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQM 373



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 45/291 (15%)

Query: 92  NHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLE 151
           N +  ++   L  L R +++  V+ ++ QM  E C   E  F  L+       L    +E
Sbjct: 411 NPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIE 470

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +F ++                                 KY     R  P+   ++ LI  
Sbjct: 471 VFEQMP--------------------------------KY-----RCTPDIVTYSSLING 493

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
             ++G +ESA E+ + M       P++ +Y+ ++ GLC+  R+ +A EL   M  KD   
Sbjct: 494 FSEQGLVESAIELFQSMP----CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKD-CP 548

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+ +T+N+LI+  C+ G  DRA ++ + M   G  P++F Y  L+NGF ++G+L +A  +
Sbjct: 549 PNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNL 608

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
              M     KPD I Y + +   CRA R  EA E++ EM  + C  + VTF
Sbjct: 609 LSTMS---CKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 160/309 (51%), Gaps = 2/309 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    +  LI  +C  G    AF+V  EM    +S PN  T++ +I GLC+     EA
Sbjct: 293 LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGIS-PNTYTFTAIISGLCRANMMAEA 351

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           I LF EM  + +I+P  +TYNV+I+G CR G +  A  +++ M   G  P+ + Y  L++
Sbjct: 352 IRLFGEMKER-KIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLIS 410

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G C  G++ EAKE  D++     K + + Y+ L++ +C+ GR  +A+   + M ERG   
Sbjct: 411 GLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAM 470

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V + I++ G  RE       G+L+++   G+  +   Y  +++   + G L++A  L 
Sbjct: 471 DLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLW 530

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            +M+  G LP+  T   L+  LCKAG+ + A +     +     P   ++   ++ + RG
Sbjct: 531 DIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRG 590

Query: 498 RKLLFAFEL 506
             +  A +L
Sbjct: 591 GNMEKAVQL 599



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 217/463 (46%), Gaps = 44/463 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG   N+ TY+ ++D   R  + +     L +MT  + +F    + +L+  +  C L  
Sbjct: 220 EKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGY--CKLGN 277

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIF 205
                ++    I +   P++   ++ ++     N+ +  + F  Y+    + + PNT  F
Sbjct: 278 ASAAKYYFDEMIDKGLTPTVVTYTSLISGY--CNEGEWHKAFKVYNEMTAKGISPNTYTF 335

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             +I   C+   +  A  +  EMK+ ++  P+ +TY+ +I+G C++G   EA  L +EMV
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKI-MPSEVTYNVMIEGHCRSGNISEAFHLLDEMV 394

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K   +PD  TY  LI G C  G+V  AK+ ++ +  +    N   Y+ L++G+CKEG+ 
Sbjct: 395 GKG-FVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453

Query: 326 QEAKE-----------------------------------VFDEMKNFLLKPDTIGYTTL 350
           ++A                                     +  EM N  L+PD + YT +
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNM 513

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+   +AG + EA  L   M + GC  ++VT+  ++ GLC+ G +++A  + ++     +
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDV 573

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N  +Y   L+   + G +EKA++L   ML +GFL    + N L+   C+ G  E+A  
Sbjct: 574 TPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATK 632

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            L G+ +    P+  +++ ++   C+   L  A +L   ++ K
Sbjct: 633 LLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDK 675



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 35/334 (10%)

Query: 164 PSLKAISTCLNLLIES---NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           P ++ +S  LN L+     N V L  + +  +N    ++P+  I++ +++  C+      
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSAN----VQPDIYIYSAVVRSLCELKDFNK 149

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE--------------------- 259
           A E++  M+ +Q    +++ Y+ LI GLCK+ R  EA+E                     
Sbjct: 150 AKEMIHWMEFNQCKL-SIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKF 208

Query: 260 -----LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
                LF+EM  K  +  + +TY++LID FCR G++D A   ++ M        V+ Y +
Sbjct: 209 NEAELLFKEMGEKG-LCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNS 267

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+NG+CK G    AK  FDEM +  L P  + YT+LI+ +C  G   +A ++  EM  +G
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
              +  TF  I+ GLCR   + EA+ +  ++    I  ++ +Y +++   C+ G + +A 
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            LL  M+ +GF+P   T   L+  LC  G   +A
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEA 421



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 149/305 (48%), Gaps = 29/305 (9%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P + T S L++GL +  RF + + LF+++VS + + PD   Y+ ++   C     ++AK+
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSAN-VQPDIYIYSAVVRSLCELKDFNKAKE 152

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKE--------------------------GKLQEAK 329
           ++ +M+ N C  ++  Y  L++G CK                           GK  EA+
Sbjct: 153 MIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAE 212

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +F EM    L  + I Y+ LI+ FCR G +D A+  L +M +   +  +  +N ++ G 
Sbjct: 213 LLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGY 272

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C+ G    A    +++   G+     +Y  +++  C +GE  KA ++   M  +G  P+ 
Sbjct: 273 CKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNT 332

Query: 450 ATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            T   ++  LC+A M  + AI LFG + E    P   ++ +++E  CR   +  AF LLD
Sbjct: 333 YTFTAIISGLCRANMMAE-AIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLD 391

Query: 509 ELVIK 513
           E+V K
Sbjct: 392 EMVGK 396



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 190/444 (42%), Gaps = 51/444 (11%)

Query: 48  DTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLAR 107
           D  +D       +++ + IS    E E   A +++N ++  KG + N  T+  I+  L R
Sbjct: 286 DEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT-AKGISPNTYTFTAIISGLCR 344

Query: 108 YKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK--PS 165
                    +  +M        E +  N+M    +C     + E FH +  +  +   P 
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSE-VTYNVMIE-GHCR-SGNISEAFHLLDEMVGKGFVPD 401

Query: 166 LKAISTCLNLLIESNQVDLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
                  ++ L    +V  A+ F+   + + H   K N   ++ L+  +CK G  + A  
Sbjct: 402 TYTYRPLISGLCSVGRVSEAKEFVDDLHKDHH---KLNNMCYSALVHGYCKEGRFKDAVS 458

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
             + M +  ++  +L+ Y+ LIDG  +    R    L +EM     + PDA+ Y  +ID 
Sbjct: 459 ACRVMVERGVAM-DLVCYAILIDGTAREHDTRALFGLLKEM-HNHGLRPDAVIYTNMIDR 516

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE--------- 334
             + G +  A  + + M + GC PNV  YT L+NG CK G + +A+ +  E         
Sbjct: 517 HSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPN 576

Query: 335 ---------------------------MKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
                                      +K FL    T+ Y  LI  FCR G+++EA +LL
Sbjct: 577 HITYGCFLDHLTRGGNMEKAVQLHHAMLKGFL--ATTVSYNILIRGFCRLGKIEEATKLL 634

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
             M +     D +T++ I+   C+   ++EA+ +   +   G+  +  +Y  +++  C  
Sbjct: 635 HGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIA 694

Query: 428 GELEKAIELLRLMLCRGFLPHYAT 451
           GELEKA EL   M+ RG   ++ T
Sbjct: 695 GELEKAFELRDEMIRRGMRSNHVT 718



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 26/241 (10%)

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            MK+    P V   + L+NG  +  +  +   +FD++ +  ++PD   Y+ ++   C   
Sbjct: 86  LMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELK 145

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG------------------ 400
             ++A E++  M+   CK  IV +N+++ GLC+  +I EAL                   
Sbjct: 146 DFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY 205

Query: 401 --------MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
                   + +++   G+  N  +Y I+++  C++GE++ AI  L  M            
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265

Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
           N L+   CK G A  A      +++ G  P   ++  L+   C   +   AF++ +E+  
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTA 325

Query: 513 K 513
           K
Sbjct: 326 K 326


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 21/345 (6%)

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L +      + PN    +ILI   C    +  AF VL ++ K     P+  T++TLI G+
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQ-PDTATFTTLIRGI 141

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
           C  G+  EA+ LF++M+  +   PD +TY  LI+G C+ G    A +++  M    C PN
Sbjct: 142 CVEGKIGEALHLFDKMIG-EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPN 200

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           VF Y T+++  CK+ ++ EA  +F EM    + PD   Y +LI+  C          LL 
Sbjct: 201 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 260

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM +     D+V+FN ++  LC+EGK+ EA  +++K+   G+  N  +Y  +++  C   
Sbjct: 261 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS 320

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE------------------DAAI 470
           E+++A+++   M+C+G +P+  + N L+   CK    +                  D A+
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAV 380

Query: 471 ALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            +F  +V  G  P   S+  L+   C+ +++  A  L  E+  +E
Sbjct: 381 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 425



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 216/453 (47%), Gaps = 61/453 (13%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL +F+ +  + GF  +  TY T+++ L +     A   +L  M  + C+          
Sbjct: 150 ALHLFDKMIGE-GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ---------- 198

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                                     P++ A +T ++ L +  QV  A N   +S    +
Sbjct: 199 --------------------------PNVFAYNTIIDSLCKDRQVTEAFNL--FSEMVTK 230

Query: 198 -LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            + P+   +N LI   C     +    +L EM  S++  P++++++T++D LCK G+  E
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI-MPDVVSFNTVVDALCKEGKVTE 289

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++ ++M+ +  + P+ +TY  L+DG C   ++D A K+ + M   GC PNV +Y TL+
Sbjct: 290 AHDVVDKMIQRG-VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 317 NGFCKEGK-------------------LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           NG+CK  +                   + EA +VFD M      P+ I Y TLIN +C+ 
Sbjct: 349 NGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 408

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            R+D+A+ L  EM  +    D VT++ ++ GLC   ++++A+ +  ++       N  +Y
Sbjct: 409 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 468

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
           RI+L++ C+   L +A+ LL+ +      P    +N  +  +C+AG  E A      L  
Sbjct: 469 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 528

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G +P+  ++++++  +CR   L  A +L  E+
Sbjct: 529 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 173/370 (46%), Gaps = 22/370 (5%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P +    T +N L +      A   L    Q    +PN   +N +I   CK   +  AF
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK-NCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  EM    +S P++ TY++LI  LC    ++    L  EMV   +I+PD +++N ++D
Sbjct: 222 NLFSEMVTKGIS-PDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPDVVSFNTVVD 279

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             C+ GKV  A  +++ M   G  PNV  YT LM+G C   ++ EA +VFD M      P
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339

Query: 343 DTIGYTTLINCFCRAGRVD-------------------EALELLKEMKERGCKADIVTFN 383
           + I Y TLIN +C+  R+D                   EA+++   M  +GC  +++++N
Sbjct: 340 NVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYN 399

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G C+  +I++A+ +  ++    +  +  +Y  +++  C    L+ AI L   M+  
Sbjct: 400 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 459

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             +P+  T   LL  LCK     +A   L  +      P+     + ++ +CR  +L  A
Sbjct: 460 SQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAA 519

Query: 504 FELLDELVIK 513
            +L   L  K
Sbjct: 520 RDLFSNLSSK 529



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 132/239 (55%), Gaps = 2/239 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI  +CK   ++ A  +  EM + ++  P+ +TYSTLI GLC   R ++AI 
Sbjct: 393 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL-IPDTVTYSTLIHGLCHVERLQDAIA 451

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EMV+  QI P+ +TY +L+D  C+   +  A  +++ ++ +  +P++      ++G 
Sbjct: 452 LFHEMVACSQI-PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 510

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G+L+ A+++F  + +  L+PD   Y+ +IN  CR G +DEA +L +EM E GC  + 
Sbjct: 511 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 570

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
             +N I  G  R  +   A+ +L+++   G   + ++  + +      G  +   ++LR
Sbjct: 571 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 205/465 (44%), Gaps = 59/465 (12%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++G  I+ +        A+ +  ++  QK    N   Y TI+D L + ++     
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMV-QKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            +  +M  +        + +L+    N    + V  + +++   ++  P + + +T ++ 
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD-SKIMPDVVSFNTVVDA 280

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L +  +V  A + +    Q   ++PN   +  L+  HC    ++ A +V   M   +   
Sbjct: 281 LCKEGKVTEAHDVVDKMIQR-GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV-CKGCM 338

Query: 236 PNLITYSTLIDGLCKNGRFR-------------------EAIELFEEMVSKDQILPDALT 276
           PN+I+Y+TLI+G CK  R                     EA+++F+ MV K   +P+ ++
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKG-CMPNVIS 397

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           YN LI+G+C+  ++D+A  +   M      P+   Y+TL++G C   +LQ+A  +F EM 
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457

Query: 337 NFLLKPDTIGYTTL-----------------------------------INCFCRAGRVD 361
                P+ + Y  L                                   I+  CRAG ++
Sbjct: 458 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 517

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A +L   +  +G + D+ T++I++ GLCR G ++EA  +  ++  +G  LN   Y  + 
Sbjct: 518 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 577

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
               +  E  +AI+LL+ M+ RGF    +T    +  L   G+ +
Sbjct: 578 RGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQ 622



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           AI  F  M+ + Q  P  + +N L+    +         +   M + G  PN++    L+
Sbjct: 45  AISSFNRML-RMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           N FC   ++  A  V  ++     +PDT  +TTLI   C  G++ EAL L  +M   G +
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFR 163

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D+VT+  ++ GLC+ G    A+ +L  +       N  +Y  +++  C+  ++ +A  L
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M+ +G  P   T N L+  LC     +  A  L  +V+    P+  S+  +V+ +C+
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 283

Query: 497 GRKLLFAFELLDELV 511
             K+  A +++D+++
Sbjct: 284 EGKVTEAHDVVDKMI 298



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 2/190 (1%)

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A   F+ M      P T+ +  L+    +       L L  +M   G   +I T +I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++   C   ++  A  +L K+   G   + A++  ++   C +G++ +A+ L   M+  G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFA 503
           F P   T   L+  LCK G    AAI L G +V+   +P   ++  +++ +C+ R++  A
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTS-AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 504 FELLDELVIK 513
           F L  E+V K
Sbjct: 221 FNLFSEMVTK 230



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 9/143 (6%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAF 222
           P ++  +  ++ +  + +++ A++   +SN   + L+P+   ++I+I   C+RG L+ A 
Sbjct: 498 PDIQVNNIAIDGMCRAGELEAARDL--FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 555

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           ++ +EM ++  +    I Y+T+  G  +N     AI+L +EMV++     DA T  + + 
Sbjct: 556 KLFREMDENGCTLNGCI-YNTITRGFLRNNETSRAIQLLQEMVARG-FSADASTMTLFVK 613

Query: 283 GFCRGGKVDRAKKIMEFMKNNGC 305
                G     K+I+     NGC
Sbjct: 614 MLSDDGLDQSLKQILR----NGC 632


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 153/288 (53%), Gaps = 16/288 (5%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  L+  + K   L  A ++   M  +   YPN +TYS LIDGLCK G  ++A E
Sbjct: 520 PNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAA-CYPNAVTYSALIDGLCKAGEIQKACE 578

Query: 260 LFEEMVSKD---------------QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           ++E+++                   I P+ +TY  LIDG C+  KV  A ++++ M   G
Sbjct: 579 VYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAG 638

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C PN   Y  L++GFCK GK+  A+EVF  M      P    YT+LI+   + GR+D A+
Sbjct: 639 CEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           ++L EM    C  ++VT+  ++ GL + G+IE+AL +L  +   G   N  +Y  +++  
Sbjct: 699 KVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGL 758

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
            + G+ + +++L + M  +G  P+Y T   L+   C AG+ ++A + L
Sbjct: 759 GKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLL 806



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 210/443 (47%), Gaps = 67/443 (15%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY T+L    + K+F     ++  M  E C  +  +F +L+  + N   +    ++F
Sbjct: 305 NVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLF 364

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
           +++             +TC +                         P    +NI I   C
Sbjct: 365 NRM-------------TTCGS------------------------PPGYVAYNIFIGSIC 387

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG---------LCKNGRFREAIELFEEM 264
            +  L +A E+L  ++K    Y  ++  S +++          LC  G+F +A ++ +EM
Sbjct: 388 GQEELPNA-ELLDLVEKV---YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEM 443

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           + K   +PD  TY  +I   C+  KV+++  + + MK  G NP+V+ YT L++ FCK G 
Sbjct: 444 MRKG-FVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGL 502

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +++A+  FDEM++    P+ + YT L++ + ++ ++ +A ++   M +  C  + VT++ 
Sbjct: 503 IEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSA 562

Query: 385 ILGGLCREGKIEEALGMLEKL-----------WYDG-----IYLNKASYRIVLNFSCQKG 428
           ++ GLC+ G+I++A  + EKL           +++G     I  N  +Y  +++  C+  
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
           ++  A ELL  ML  G  P+    + L+   CK G  ++A      + + G+ P   ++ 
Sbjct: 623 KVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYT 682

Query: 489 LLVELICRGRKLLFAFELLDELV 511
            L++ + +  +L  A ++L E++
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSEML 705



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 210/479 (43%), Gaps = 58/479 (12%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KGF  + +TY  ++  L + KK E    + ++M           +  L+  F    L E
Sbjct: 445 RKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIE 504

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
           +    F ++  +    P++   +  L+  ++S Q+  A +   +        PN   ++ 
Sbjct: 505 QARSWFDEMRSVGC-SPNVVTYTALLHAYLKSKQLIQAHDIF-HRMVDAACYPNAVTYSA 562

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSY---------------PNLITYSTLIDGLCKNG 252
           LI   CK G ++ A EV +++  +  +                PN++TY  LIDGLCK  
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAK------------------ 294
           +  +A EL + M++     P+ + Y+ LIDGFC+ GK+D A+                  
Sbjct: 623 KVSDAHELLDAMLAAG-CEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTY 681

Query: 295 -----------------KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
                            K++  M N+ CNPNV  YT +++G  K G++++A  +   M+ 
Sbjct: 682 TSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEE 741

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
               P+ + YT LI+   + G+ D +L+L K+M  +GC  + VT+ +++   C  G ++E
Sbjct: 742 KGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDE 801

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           A  +L+++ +     +   Y   +    +K     ++ LL  M     +P       L+ 
Sbjct: 802 AHLLLDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLEEMESHETVPIAPVYGMLID 859

Query: 458 RLCKAGMAEDAAIALFGLVEMGFK---PESDSWALLVELICRGRKLLFAFELLDELVIK 513
              KAG  E A      LVE+        +  +A L++ +C   ++  AF L  E+  K
Sbjct: 860 SFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRK 918



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 151/321 (47%), Gaps = 17/321 (5%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P+   +N L++     G +E  F V KEM  S     +  T       LCK GR+ +A+
Sbjct: 201 RPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCM-DRSTIGYFAQALCKVGRWADAL 259

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + E    K+    D +    +I G       + A   +  M+ N C PNV  Y TL++G
Sbjct: 260 NMLE----KEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSG 315

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           F K+ +    K + + M      P+   + +L++ +C AG    A +L   M   G    
Sbjct: 316 FLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPG 375

Query: 379 IVTFNIILGGLCREGKIEEA--LGMLEKLWYDGI----YLNKASYRIVLNFS---CQKGE 429
            V +NI +G +C + ++  A  L ++EK++ + +     LNK +     NFS   C  G+
Sbjct: 376 YVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVN---TANFSRCLCGVGK 432

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            EKA ++L+ M+ +GF+P  +T  +++  LC+A   E + +    +   G  P+  ++ +
Sbjct: 433 FEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTI 492

Query: 490 LVELICRGRKLLFAFELLDEL 510
           L++  C+   +  A    DE+
Sbjct: 493 LIDSFCKAGLIEQARSWFDEM 513



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 40/353 (11%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY  ++D L + +K      +L  M    C+ ++ ++  L+  F      +   E+F
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF 666

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
            ++       PS+   ++ ++ + +  ++DLA   L     +    PN   +  +I    
Sbjct: 667 LRMTKCGY-LPSVHTYTSLIDRMFKDGRLDLAMKVLS-EMLNDSCNPNVVTYTAMIDGLS 724

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
           K G +E A  +L  M++   S PN++TY+ LIDGL K G+   +++LF++M SK    P+
Sbjct: 725 KVGEIEKALNLLSLMEEKGCS-PNVVTYTALIDGLGKTGKADASLKLFKQMNSKG-CAPN 782

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG---------CNPNVFN------------- 311
            +TY VLI+  C  G +D A  +++ MK+           C    F+             
Sbjct: 783 YVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEM 842

Query: 312 -----------YTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYTTLINCFCRA 357
                      Y  L++ F K G+L+ A E+  E+    + L    T  Y +LI   C A
Sbjct: 843 ESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLA 902

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
            +V+EA  L  EM  +G   D++ F  ++ GL    K +EAL +     ++G+
Sbjct: 903 SQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGV 955



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 30/250 (12%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++ A I  +    E + AL +  ++ E+KG + N  TY  ++D L +  K +A   + +
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLL-SLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFK 772

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSL----HERVLEMFHKIHP-------ITREKPSLKA 168
           QM  + C  +   +  L+ H     L    H  + EM H   P          +  S K 
Sbjct: 773 QMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKF 832

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           I++ L LL E             S++ + + P   ++ +LI    K G LE+A E+ KE+
Sbjct: 833 IAS-LGLLEEME-----------SHETVPIAP---VYGMLIDSFSKAGRLETALELHKEL 877

Query: 229 KK--SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
            +  S ++  +   Y++LI  LC   +  EA  L+ EM  K  I+PD + +  L+ G   
Sbjct: 878 VEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKG-IVPDLIVFVSLVKGLIE 936

Query: 287 GGKVDRAKKI 296
             K D A ++
Sbjct: 937 VNKWDEALQL 946



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 76/192 (39%), Gaps = 3/192 (1%)

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G   EA E    +K+F  +P  + Y  L+     AG+V+    + KEM   G   D 
Sbjct: 180 CRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDR 239

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T       LC+ G+  +AL MLEK   +   L+      +++   +     +A+  L  
Sbjct: 240 STIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNEAMSFLHR 296

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M C   +P+  T   LL    K          +  ++  G  P    +  LV   C    
Sbjct: 297 MRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGD 356

Query: 500 LLFAFELLDELV 511
             +A++L + + 
Sbjct: 357 YAYAYKLFNRMT 368


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 197/364 (54%), Gaps = 4/364 (1%)

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L++F ++       P  + +S  ++    +N +D +   L  +++    +     +N L+
Sbjct: 164 LQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE-FGCRVEAYAYNKLM 222

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
                RG +     + +   + ++  P++ +++ +I G+C+ G+ ++A+EL E M ++  
Sbjct: 223 SSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM-NEFG 281

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNGFCKEGKLQEA 328
             PD +T+N+L+DG CR  +V R  +++  ++ +G C PNV  +T++++G+CK GKL++A
Sbjct: 282 CSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDA 341

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             V+++M    + P+T+ Y  LIN + + G +  A+E+ ++M    C  D+VTF+ ++ G
Sbjct: 342 MAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDG 401

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLMLCRGFLP 447
            CR G++++AL +   +    I  N  ++ I+++  C++   ++AI LL  L L     P
Sbjct: 402 YCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAP 461

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                N ++  LCK G  ++A +   G+ E G +P+  ++ +L+   C   ++  A    
Sbjct: 462 QAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFF 521

Query: 508 DELV 511
            E+V
Sbjct: 522 HEMV 525



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 200/404 (49%), Gaps = 4/404 (0%)

Query: 66  ISLIKCEKEPQC-ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
           I ++ C    Q  AL++F+ ++   G++ +    + ++         +A   +L + +  
Sbjct: 150 IIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEF 209

Query: 125 TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
            C+     +  LM           V+ +F +        P + + +  +  +    QV  
Sbjct: 210 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQK 269

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A   ++  N+     P+T   NIL+   C+   +    EVL+ +++  +  PN++T++++
Sbjct: 270 ALELVERMNE-FGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSV 328

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           I G CK G+  +A+ ++ +MV+   I+P+ +TYNVLI+G+ + G +  A ++ + M    
Sbjct: 329 ISGYCKAGKLEDAMAVYNDMVASG-IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 387

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C P+V  +++L++G+C+ G+L +A  ++ +M    ++P+   ++ +I+  C+  R DEA+
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447

Query: 365 ELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
            LL E+  R         +N ++  LC+ GK++EA  + + +   G   +K +Y I++  
Sbjct: 448 GLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 507

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            C K  + +AI     M+  G  P   T N  +  L KAGM  +
Sbjct: 508 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNE 551



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 155/287 (54%), Gaps = 2/287 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   FN++IK  C+ G ++ A E+++ M +   S P+ +T++ L+DGLC+        
Sbjct: 248 SPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCS-PDTVTHNILVDGLCRTNEVSRGH 306

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+   +      +P+ +T+  +I G+C+ GK++ A  +   M  +G  PN   Y  L+NG
Sbjct: 307 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 366

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           + K G L  A EV+ +M      PD + +++LI+ +CR G++D+AL +  +M +   + +
Sbjct: 367 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 426

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + TF+II+  LC++ + +EA+G+L +L     I      Y  V++  C+ G++++A  + 
Sbjct: 427 VYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIR 486

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           + M  +G  P   T   L++  C      +A +    +VE G  P+S
Sbjct: 487 KGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 533



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 3/295 (1%)

Query: 219 ESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            SA  V   +  S +S  P+  +   +I  LC++GR  +A++LF++M +     PDA   
Sbjct: 124 SSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 183

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE-MK 336
           + L+        +D +  ++      GC    + Y  LM+     G++ +   +F+  ++
Sbjct: 184 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 243

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           + +  PD   +  +I   CR G+V +ALEL++ M E GC  D VT NI++ GLCR  ++ 
Sbjct: 244 DRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVS 303

Query: 397 EALGMLEKLWYDGIYL-NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
               +L +L  DG+ + N  ++  V++  C+ G+LE A+ +   M+  G +P+  T N L
Sbjct: 304 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 363

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +    K G    A      +  +   P+  +++ L++  CR  +L  A  +  ++
Sbjct: 364 INGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDM 418



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 11/297 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-TCKFHEGIFL 134
           Q ALE+   ++E  G + +  T+  ++D L R  +      VLR++  +  C  +   F 
Sbjct: 268 QKALELVERMNE-FGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFT 326

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYS 192
           +++  +      E  + +++ +         +   +   N+LI       DL      Y 
Sbjct: 327 SVISGYCKAGKLEDAMAVYNDM-----VASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 381

Query: 193 NQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
               LR  P+   F+ LI  +C+ G L+ A  +  +M + ++  PN+ T+S +I  LCK 
Sbjct: 382 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQ-PNVYTFSIIIHSLCKQ 440

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R  EAI L  E+  +  I P A  YN +ID  C+ GKVD A  I + M+  GC P+ + 
Sbjct: 441 NRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYT 500

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           YT L+ G+C + ++ EA   F EM      PD+I     I+C  +AG  +E   +++
Sbjct: 501 YTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 557


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 191/366 (52%), Gaps = 9/366 (2%)

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E+ +E F ++     E P L++    L+ L +S ++  A          +   P+   +N
Sbjct: 158 EQAMEFFKEMKASGVE-PDLESYHILLSALSDSGRMAEAHALF----SAMTCSPDIMTYN 212

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +L+  +CK G    A  ++KE+ K+    PN+ TYS +I+  CK  +  EA E+F +M+ 
Sbjct: 213 VLMDGYCKIGQTYEAQSLMKEILKAGYE-PNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE-GKL 325
            + + P+A+T+N LI GFC+ G ++ A K+   M+  GC   +  Y TL++  CK+ G +
Sbjct: 272 SNCV-PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
             A ++F++++   L P  + Y +LI  FC A R+ EA++   EM+ + C  +++T++I+
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSIL 389

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC+  +++EA   LE +   G      +Y  ++N  C+ GEL+ A+     M   G 
Sbjct: 390 IDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC 449

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
            P+    N L+  LCKA  A D    L  +   G KP+  ++  L+  +C   ++  A  
Sbjct: 450 APNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQR 509

Query: 506 LLDELV 511
           L D + 
Sbjct: 510 LFDGMA 515



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 173/317 (54%), Gaps = 12/317 (3%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N+LI+  CK G +  A  V  +MK S +  PN  T +TL+ GLC+ G+   A++
Sbjct: 30  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGL-LPNASTMNTLLLGLCEIGQMSSALK 88

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM      LP + ++N+L+ GF   G+V  A   ++ M+ +  +     Y  ++ G 
Sbjct: 89  LFREM-QAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGL 147

Query: 320 CKEGK----LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           C E K    L++A E F EMK   ++PD   Y  L++    +GR+ EA  L   M    C
Sbjct: 148 CWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---C 204

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             DI+T+N+++ G C+ G+  EA  +++++   G   N  +Y I++N  C+  ++E+A E
Sbjct: 205 SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 264

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELI 494
           +   M+    +P+  T N L+   CKAGM ED AI LF  +E +G K    ++  L++ +
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLED-AIKLFAEMEKIGCKATIVTYNTLIDSL 323

Query: 495 CRGRKLLF-AFELLDEL 510
           C+ R  ++ A +L ++L
Sbjct: 324 CKKRGGVYTAVDLFNKL 340



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 162/300 (54%), Gaps = 11/300 (3%)

Query: 202 TCIFNILIKHHC----KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           T  +N+++K  C        LE A E  KEMK S +  P+L +Y  L+  L  +GR  EA
Sbjct: 137 TGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE-PDLESYHILLSALSDSGRMAEA 195

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF  M       PD +TYNVL+DG+C+ G+   A+ +M+ +   G  PNVF Y+ ++N
Sbjct: 196 HALFSAMTCS----PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIIN 251

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            +CK  K++EA EVF +M      P+ + + TLI  FC+AG +++A++L  EM++ GCKA
Sbjct: 252 CYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKA 311

Query: 378 DIVTFNIILGGLCRE-GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            IVT+N ++  LC++ G +  A+ +  KL   G+     +Y  ++   C    L +A++ 
Sbjct: 312 TIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQY 371

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
              M  +   P+  T + L+  LCK    ++AA  L  +   G+ P   ++  L+   C+
Sbjct: 372 FDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCK 430



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 46/352 (13%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G+  N  TY+ I++   +  K E    V  +M    C  +   F  L+  F    + E
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             +++F ++     EK   KA     N LI+S                            
Sbjct: 296 DAIKLFAEM-----EKIGCKATIVTYNTLIDS---------------------------- 322

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           L K   KRG + +A ++  +++ + ++ P ++TY++LI G C   R  EA++ F+EM  K
Sbjct: 323 LCK---KRGGVYTAVDLFNKLEGAGLT-PTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK 378

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
               P+ +TY++LIDG C+  ++  A K +E MK +G  P V  Y  L+NGFCK G+L+ 
Sbjct: 379 --CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKS 436

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A   F++MK     P+T+ + TLI+  C+A R ++ L LL  M   GCK D++T+N ++ 
Sbjct: 437 ALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLIS 496

Query: 388 GLCREGKIEEALGMLEKLWYDGIYL--NKASYRIVLNFSCQKGELEKAIELL 437
           GLC   ++E+A     +  +DG+    N  ++  ++   C + ++E+A  +L
Sbjct: 497 GLCSANRVEDA-----QRLFDGMACAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 139/270 (51%), Gaps = 7/270 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN-GRFREAI 258
           PN   FN LI   CK G LE A ++  EM+K       ++TY+TLID LCK  G    A+
Sbjct: 276 PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK-ATIVTYNTLIDSLCKKRGGVYTAV 334

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           +LF ++     + P  +TYN LI GFC   ++  A +  + M+   C PNV  Y+ L++G
Sbjct: 335 DLFNKLEGAG-LTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDG 392

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK  +++EA +  ++MK     P  + Y  LIN FC+ G +  AL   ++MK  GC  +
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            V FN ++ GLC+  +  + L +L  +  +G   +  +Y  +++  C    +E A  L  
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            M C    P+  T N L+  LC     E+A
Sbjct: 513 GMACA---PNVTTFNFLIRGLCAQKKVEEA 539



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 168/350 (48%), Gaps = 40/350 (11%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN    N L+   C+ G + SA ++ +EM+      P   +++ L+ G    GR R+A
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPF-LPTSASHNILLRGFFMAGRVRDA 121

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGK-VDRAKKIMEF---MKNNG--------- 304
           +   ++M      +    TYN+++ G C   K  +R ++ MEF   MK +G         
Sbjct: 122 LAHLQDMRKSSSSVATG-TYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 305 -----------------------CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
                                  C+P++  Y  LM+G+CK G+  EA+ +  E+     +
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE 240

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+   Y+ +INC+C+  +V+EA E+  +M E  C  + VTFN ++ G C+ G +E+A+ +
Sbjct: 241 PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKL 300

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQK-GELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
             ++   G      +Y  +++  C+K G +  A++L   +   G  P   T N L+   C
Sbjct: 301 FAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFC 360

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            A    + A+  F  +E    P   ++++L++ +C+ R++  A + L+++
Sbjct: 361 DARRLSE-AMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDM 409



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 148/274 (54%), Gaps = 8/274 (2%)

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           + L+ GL    +  +A+ LF+E+++     P+A TYNVLI GFC+GG++ +A  +   MK
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLA-GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           ++G  PN     TL+ G C+ G++  A ++F EM+     P +  +  L+  F  AGRV 
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGK----IEEALGMLEKLWYDGIYLNKASY 417
           +AL  L++M++        T+N++L GLC E K    +E+A+   +++   G+  +  SY
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I+L+     G + +A  L   M C    P   T N L+   CK G   +A   +  +++
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G++P   ++++++   C+  K+  A+E+  +++
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 218/457 (47%), Gaps = 67/457 (14%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           K+E   +V+R+M  +        +  ++ +  N S  E    +F ++     ++  L A 
Sbjct: 422 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-----KRGGLVAD 476

Query: 170 STCLNLLIESN-QVDLAQNFLKYSNQ--HLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
                ++++S  +  L +   K+ N+   +   PN   +  LI  + K   +  A E+ +
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 536

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI---------------L 271
            M  S+   PN++TYS LIDG CK G+  +A ++FE M     +                
Sbjct: 537 TML-SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 595

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+ +TY  L+DGFC+  +V+ A+K+++ M   GC PN   Y  L++G CK GKL EA+EV
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655

Query: 332 FDEM-----------------KNFLLK------------------PDTIGYTTLINCFCR 356
             EM                 + F +K                  P+ + YT +I+  C+
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G+ DEA +L++ M+E+GC+ ++VT+  ++ G    GKIE  L +LE++   G+  N  +
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           YR++++  C+ G L+ A  LL  M    +  H A   +++      G  ++   +L  L 
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI-----EGFNKEFIESLGLLD 830

Query: 477 EMG---FKPESDSWALLVELICRGRKLLFAFELLDEL 510
           E+G     P    + LL++ + + ++L  A  LL+E+
Sbjct: 831 EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 867



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 214/449 (47%), Gaps = 25/449 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A + FN + E  G   N  TY  ++    + KK    + +   M  E C  +   +  L+
Sbjct: 496 ARKWFNEMREV-GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 554

Query: 138 KHF-------SNCSLHERV--------LEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
                       C + ER+        ++M+ K +    E+P++      L+   +S++V
Sbjct: 555 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 614

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITY 241
           + A+  L   +     +PN  +++ LI   CK G L+ A EV  EM  S+  +P  L TY
Sbjct: 615 EEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFPATLYTY 671

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S+LID   K  R   A ++  +M+ ++   P+ + Y  +IDG C+ GK D A K+M+ M+
Sbjct: 672 SSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 730

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC PNV  YT +++GF   GK++   E+ + M +  + P+ + Y  LI+  C+ G +D
Sbjct: 731 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 790

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  LL+EMK+         +  ++ G  +E    E+LG+L+++  D      + YR+++
Sbjct: 791 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLI 848

Query: 422 NFSCQKGELEKAIELLR--LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +   +   LE A+ LL          + + +T N L+  LC A   E A      + + G
Sbjct: 849 DNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 908

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLD 508
             PE  S+  L++ + R  K+  A  LLD
Sbjct: 909 VIPEMQSFCSLIKGLFRNSKISEALLLLD 937



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 209/457 (45%), Gaps = 40/457 (8%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM------ 137
           T+ E + F  +   Y  ++  L     FE     L +M   +C  +   +  L+      
Sbjct: 250 TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 309

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--H 195
           K    C   +RVL M      +    PS K  ++ ++    S     A   LK   +  H
Sbjct: 310 KQLGRC---KRVLNMMM----MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 362

Query: 196 LRLKPNTCIFNILIKHHC-KRGTLESAFEVLKEMKKSQMSYP----NLITYSTLIDGLCK 250
           +   P   ++NILI   C  + +L      L E   S+M       N I  S+    LC 
Sbjct: 363 M---PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 419

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G++ +A  +  EM+ +   +PD  TY+ +++  C   K++ A  + E MK  G   +V+
Sbjct: 420 AGKYEKAFSVIREMIGQG-FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 478

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            YT +++ FCK G +++A++ F+EM+     P+ + YT LI+ + +A +V  A EL + M
Sbjct: 479 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 538

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKL--------------WYD--GIYLNK 414
              GC  +IVT++ ++ G C+ G++E+A  + E++               YD      N 
Sbjct: 539 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 598

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +L+  C+   +E+A +LL  M   G  P+    + L+  LCK G  ++A      
Sbjct: 599 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 658

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + E GF     +++ L++   + ++   A ++L +++
Sbjct: 659 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 695



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 194/462 (41%), Gaps = 59/462 (12%)

Query: 51  VDARKRSRFI-------SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD 103
           V  RK  +F+       S    I +++    P   +  F     Q G+ H    Y  ++D
Sbjct: 73  VFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVD 132

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM--KHFSNCSLHERVLEMFHKIHPITR 161
            + R    +  +  L+Q+  +  +   G FLN++  KH  N S     LE   ++     
Sbjct: 133 LIVRDDDEKVPEEFLQQIRDDDKEVF-GQFLNVLVRKHCRNGSF-SIALEELGRL----- 185

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
                                           +  R +P+   +N LI+   K   L+SA
Sbjct: 186 --------------------------------KDFRFRPSRSTYNCLIQAFLKADRLDSA 213

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             + +EM  + +      T       LCK G++REA+ L E     +  +PD + Y  LI
Sbjct: 214 SLIHREMSLANLRMDGF-TLRCFAYSLCKVGKWREALTLVE----TENFVPDTVFYTKLI 268

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C     + A   +  M+   C PNV  Y+TL+ G   + +L   K V + M      
Sbjct: 269 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 328

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC--REGKIEEAL 399
           P    + +L++ +C +G    A +LLK+M + G     V +NI++G +C  ++    + L
Sbjct: 329 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLL 388

Query: 400 GMLEKLWYD----GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            + EK + +    G+ LNK +        C  G+ EKA  ++R M+ +GF+P  +T +++
Sbjct: 389 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 448

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           L  LC A   E A +    +   G   +  ++ ++V+  C+ 
Sbjct: 449 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 490



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 138/304 (45%), Gaps = 17/304 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+   +SE  GF     TY++++D+  + K+ +    VL +M   +C  +  I+  ++
Sbjct: 652 AQEVKTEMSEH-GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 710

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
                    +      +K+  +  EK   P++   +  ++      +++     L+    
Sbjct: 711 DGLCKVGKTDEA----YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 766

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGR 253
              + PN   + +LI H CK G L+ A  +L+EMK  Q  +P +   Y  +I+G   N  
Sbjct: 767 K-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK--QTHWPTHTAGYRKVIEGF--NKE 821

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN-- 311
           F E++ L +E + +D   P    Y +LID   +  +++ A +++E +         ++  
Sbjct: 822 FIESLGLLDE-IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 880

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y +L+   C   K++ A ++F EM    + P+   + +LI    R  ++ EAL LL  + 
Sbjct: 881 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFIS 940

Query: 372 ERGC 375
              C
Sbjct: 941 HMVC 944


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 174/316 (55%), Gaps = 8/316 (2%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           ++  +I   CK G ++ AFE+L EMK+  +   +++ +STLI GLC+ GR  EA+E F+ 
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKM-DVLLHSTLIQGLCRKGRIDEALEQFKS 59

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK-----NNGCNPNVFNYTTLMNG 318
           M   ++  P+ +TYN +++G C+  ++D   ++ + M+     ++GC P+V +Y+T+++ 
Sbjct: 60  M--GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDA 117

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            CK  ++ +A E F  M+     P+ + Y++LI+  C+  RVDEA  LL ++K       
Sbjct: 118 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            + +N ++ G  R+GK  E L +L  +   G  +N   +  +L+   +  E EKA +   
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +L  G  P+  T N  +  LCKAG  ++A   L  +VE    P+  +++ +++  C+  
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 499 KLLFAFELLDELVIKE 514
           ++  A ++   +++ E
Sbjct: 298 RMDKADDVFTRMMVHE 313



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 197/413 (47%), Gaps = 77/413 (18%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           +T +N   ++ QVD A   L    +   +K +  + + LI+  C++G ++ A E  K M 
Sbjct: 3   TTVINGFCKAGQVDQAFELLDEMKER-GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL----PDALTYNVLIDGFC 285
             +   PN+ITY+T+++GLCK  R  E +ELF++M  + +      PD ++Y+ +ID  C
Sbjct: 61  -GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           +  +VD+A +  + M+  GC PNV  Y++L++G CK  ++ EA  +  ++K   + P  +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERG------------------------C------ 375
            Y  ++N F R G+  E LELL  MKE+G                        C      
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 376 -----KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
                K ++VT+N+ + GLC+ GK++EA  +L ++    +  +  +Y  +++  C+ G +
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 431 EKAIELLRLMLCR-----------------------------------GFLPHYATSNEL 455
           +KA ++   M+                                     GF+P   T N L
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 359

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
           +  +C A   E A      +     +P+++++A L++ +CR R++  A E LD
Sbjct: 360 MDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLD 412



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/520 (25%), Positives = 228/520 (43%), Gaps = 79/520 (15%)

Query: 30  LEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQK 89
           LE  K+   +  P V T +T V+   ++  I  G               LE+F+ + ++ 
Sbjct: 54  LEQFKSMGEECSPNVITYNTVVNGLCKANRIDEG---------------LELFDDMEKRY 98

Query: 90  GFNH----NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
             +H    +  +Y+T++D L + ++ +      ++M    C  +   + +L+     C +
Sbjct: 99  EASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGL--CKV 156

Query: 146 HERVLEMFHKIHPITREKPSLKAI---------------STCLNLLIESNQVDLAQNFLK 190
            +RV E +  +  +  E    +A+               S CL LL+   +     N + 
Sbjct: 157 -DRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIID 215

Query: 191 YSNQHLRL---------------------KPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           ++     L                     KPN   +N+ +   CK G ++ A+ +L EM 
Sbjct: 216 FNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMV 275

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
           +S+++ P++ITYS++IDG CK GR  +A ++F  M+   + +P  +T+  L+ GF    K
Sbjct: 276 ESKVT-PDVITYSSIIDGFCKAGRMDKADDVFTRMMVH-ECIPHPVTFMTLLHGFSEHKK 333

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
              A ++ E M N G  P +  Y  LM+  C    ++ A E++ +MK    +PD   Y  
Sbjct: 334 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAP 393

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML------- 402
           LI C CRA RVDEA E L  M+      +    + ++  LC++G+++EA  +L       
Sbjct: 394 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEIC 453

Query: 403 ------------EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
                       E++   G+  ++A+Y  VL   C    ++ AI     M  RG  P   
Sbjct: 454 KAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLV 513

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           T   L+   C A MA+DA      +V  GF P++ +   L
Sbjct: 514 TYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 117/300 (39%), Gaps = 55/300 (18%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN-------------- 142
           TY++I+D   +  + +  D V  +M    C  H   F+ L+  FS               
Sbjct: 285 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 344

Query: 143 -------------------CSLH--ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
                              C     E  LE++HK+    R+ P     +  +  L  + +
Sbjct: 345 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQ-PDANTYAPLIQCLCRARR 403

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           VD A+ FL        + PN  I + L++  CK+G ++ A  VL           N++  
Sbjct: 404 VDEAKEFLDVMEAD-NVVPNGAICHALVEVLCKQGEVDEACSVLD----------NVVE- 451

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
                 +CK G   EA+E+ E+MV K  + PD  TY  ++   C   +VD A    E M 
Sbjct: 452 ------ICKAGEPDEAVEVIEQMVLKG-VRPDEATYVAVLRSLCGLDRVDSAIAEFEKMA 504

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           + GC P +  YT L+   C      +A  +F+ M      P      TL +C   AG  D
Sbjct: 505 SRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 210/447 (46%), Gaps = 29/447 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G +    T+  ++  L      +A   +  +M  + CK +E  F  L++ +    L ++ 
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           LE+ + +       P+    +T ++      + D ++  ++   +   L P+   FN  I
Sbjct: 202 LELLNSMESFGV-LPNKVVYNTIVSSFCREGRNDDSEKLVEKMREE-GLVPDIVTFNSRI 259

Query: 210 KHHCKRGTLESAFEVLKEMKKSQ---MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
              CK G +  A  +  +M+  +   +  PN ITY+ ++ G CK G   +A  LFE +  
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            D ++    +YN+ + G  R GK   A+ +++ M + G  P++++Y  LM+G CK G L 
Sbjct: 320 NDDLV-SLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLS 378

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +AK +   MK   + PD + Y  L++ +C  G+VD A  LL+EM    C  +  T NI+L
Sbjct: 379 DAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF- 445
             L   G+I EA  +L K+   G  L+  +  I+++  C  GEL+KAIE+++ M   G  
Sbjct: 439 HSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498

Query: 446 ----------------------LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
                                 LP   T + LL  LCKAG   +A      ++    +P+
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPD 558

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
           S ++ + +   C+  K+  AF +L ++
Sbjct: 559 SLAYNIFIHHFCKQGKISSAFRVLKDM 585



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 173/337 (51%), Gaps = 26/337 (7%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +  L+  +C  G +++A  +L+EM ++    PN  T + L+  L   GR  EA
Sbjct: 392 VSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWNMGRISEA 450

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK---------------- 301
            EL  +M  K   L D +T N+++DG C  G++D+A +I++ M+                
Sbjct: 451 EELLRKMNEKGYGL-DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509

Query: 302 -------NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
                   N C P++  Y+TL+NG CK G+  EAK +F EM    L+PD++ Y   I+ F
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHF 569

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G++  A  +LK+M+++GC   + T+N ++ GL  + +I E  G+++++   GI  N 
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNI 629

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y   + + C+ G++E A  LL  M+ +   P+  +   L+   CK    + A      
Sbjct: 630 CTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFET 689

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            V +  + E     +  EL+  G+ LL A ELL+ ++
Sbjct: 690 AVSICGQKEGLYSLMFNELLAAGQ-LLKATELLEAVL 725



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 200/419 (47%), Gaps = 19/419 (4%)

Query: 67  SLIKCEKEPQCALEIFNTV-----SEQKGFN-HNNATYATILDKLARYKKFEAVDAVLRQ 120
           +L+K    P+ A  IF  +      E  G +     T A IL +   +++ E +  ++  
Sbjct: 8   ALLKNTNNPRLAWRIFKRIFSSPSEESHGISLAATPTMACILVRAKMHEEIEELHNLILS 67

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP-ITREKPSLKAISTCLNLLIES 179
            + +  K      L+++  F+  +  ++    F  +       KP +   +  L   I  
Sbjct: 68  SSIQKTKLSS--LLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRE 125

Query: 180 NQVDLAQNFLKYSNQHL-RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
            +V+       Y +  L  + P T  FN+LI+  C    +++A E+  EM +     PN 
Sbjct: 126 RRVEFVSWL--YKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCK-PNE 182

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
            T+  L+ G CK G   + +EL   M S   +LP+ + YN ++  FCR G+ D ++K++E
Sbjct: 183 FTFGILVRGYCKAGLTDKGLELLNSMESFG-VLPNKVVYNTIVSSFCREGRNDDSEKLVE 241

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN----FLLKPDTIGYTTLINCF 354
            M+  G  P++  + + ++  CKEGK+ +A  +F +M+      L +P++I Y  ++  F
Sbjct: 242 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 301

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
           C+ G +++A  L + ++E      + ++NI L GL R GK  EA  +L+++   GI  + 
Sbjct: 302 CKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSI 361

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
            SY I+++  C+ G L  A  ++ LM   G  P   T   LL   C  G   DAA +L 
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKV-DAAKSLL 419



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 211/430 (49%), Gaps = 15/430 (3%)

Query: 99  ATILDKLARYKKFEAVDAVLRQMTYETCKFHE---GIFL-NLMKHFSNCSLHERV--LEM 152
           +++L  ++ + K   +D    Q  +   +F E   GI+L N++    +C    RV  +  
Sbjct: 76  SSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVL--LESCIRERRVEFVSW 133

Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
            +K   +    P     +  +  L +S+ VD A+       +    KPN   F IL++ +
Sbjct: 134 LYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGY 192

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           CK G  +   E+L  M+ S    PN + Y+T++   C+ GR  ++ +L E+M  ++ ++P
Sbjct: 193 CKAGLTDKGLELLNSME-SFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKM-REEGLVP 250

Query: 273 DALTYNVLIDGFCRGGKVDRAKKI---MEFMKNNGC-NPNVFNYTTLMNGFCKEGKLQEA 328
           D +T+N  I   C+ GKV  A +I   ME  +  G   PN   Y  ++ GFCK G L++A
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           K +F+ ++          Y   +    R G+  EA  +LK+M ++G    I ++NI++ G
Sbjct: 311 KTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDG 370

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           LC+ G + +A  ++  +  +G+  +  +Y  +L+  C  G+++ A  LL+ M+    LP+
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T N LL  L   G   +A   L  + E G+  ++ +  ++V+ +C   +L  A E++ 
Sbjct: 431 AYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490

Query: 509 ELVIKESGTI 518
            + +  S  +
Sbjct: 491 GMRVHGSAAL 500



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 172/343 (50%), Gaps = 33/343 (9%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLESAF 222
           P+    +  L+ L    ++  A+  L+  N+    L   TC  NI++   C  G L+ A 
Sbjct: 429 PNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTC--NIIVDGLCGSGELDKAI 486

Query: 223 EVLKEMKKSQM--------SY--------------PNLITYSTLIDGLCKNGRFREAIEL 260
           E++K M+            SY              P+LITYSTL++GLCK GRF EA  L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F EM+  +++ PD+L YN+ I  FC+ GK+  A ++++ M+  GC+ ++  Y +L+ G  
Sbjct: 547 FAEMMG-EKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            + ++ E   + DEM+   + P+   Y T I   C  G+V++A  LL EM ++    ++ 
Sbjct: 606 IKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVF 665

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYL---NKASYRIVLNFSCQKGELEKAIELL 437
           +F  ++G  C+    +    M ++++   + +    +  Y ++ N     G+L KA ELL
Sbjct: 666 SFKYLIGAFCKVPDFD----MAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 721

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
             +L RGF        +L+V LCK    E A+  L  +++ G+
Sbjct: 722 EAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGY 764



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 177/373 (47%), Gaps = 60/373 (16%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN+  +N+++K  CK G LE A  + + ++++     +L +Y+  + GL ++G+F EA 
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIREND-DLVSLQSYNIWLQGLVRHGKFIEAE 346

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            + ++M+ K  I P   +YN+L+DG C+ G +  AK I+  MK NG +P+   Y  L++G
Sbjct: 347 TVLKQMIDKG-IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHG 405

Query: 319 FCKEGKLQEAKEVFDEMK-----------NFLLKP------------------------D 343
           +C  GK+  AK +  EM            N LL                          D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLD 465

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERG-----------------------CKADIV 380
           T+    +++  C +G +D+A+E++K M+  G                       C  D++
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ +L GLC+ G+  EA  +  ++  + +  +  +Y I ++  C++G++  A  +L+ M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDM 585

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G      T N L++ L       +    +  + E G  P   ++   ++ +C G K+
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKV 645

Query: 501 LFAFELLDELVIK 513
             A  LLDE++ K
Sbjct: 646 EDATNLLDEMMQK 658



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 143/270 (52%), Gaps = 4/270 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P L   ST LN L ++ +   A+          +L+P++  +NI I H CK+G + SAF 
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKTLFAEMMGE-KLQPDSLAYNIFIHHFCKQGKISSAFR 580

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VLK+M+K +  + +L TY++LI GL    +  E   L +EM  K  I P+  TYN  I  
Sbjct: 581 VLKDMEK-KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKG-ISPNICTYNTAIQY 638

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C GGKV+ A  +++ M      PNVF++  L+  FCK      A+EVF+   +   + +
Sbjct: 639 LCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKE 698

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y+ + N    AG++ +A ELL+ + +RG +     +  ++  LC++ ++E A G+L 
Sbjct: 699 GL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILH 757

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           K+   G   + A+   V++   + G  ++A
Sbjct: 758 KMIDKGYGFDPAALMPVIDGLGKMGNKKEA 787


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 204/408 (50%), Gaps = 6/408 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E F++++  KG   +  +Y T+L   A    F  +  +   M       +  +F  L+
Sbjct: 389 AAEFFDSMTA-KGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILI 447

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             ++   + +  + +F ++       P +   ST ++    S    L     K++    R
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQ-QGVSPDVVTYSTVISTF--SRMGRLTDAMEKFNQMVAR 504

Query: 198 -LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
            ++PNT +++ +I+  C  G L  A E++ EM    +  P+++ +S++I+ LCK+GR  +
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A ++F+ + +     P  +T+N LIDG+C  GK+D+A KI++ M+  G  P++  Y TL+
Sbjct: 565 AHDIFD-LATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +G+ K G++ +   +F EM+   +KP+T+ Y  ++    RAGR   A +   EM E G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             +  + IILGGLCR    +EA+ + +KL    +  +      ++N   +    E+A EL
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
              +   G LP+ +T   +++ L K G  EDA      + + G  P S
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGS 791



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 217/441 (49%), Gaps = 7/441 (1%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE-AVDAVLRQMTYETCKFHEG 131
           + P   L +F  +  + G   +  T  T+L  L    + E AV+ +L +M+   C  +  
Sbjct: 171 RRPDLGLALFGCI-LRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAV 229

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLK 190
            +  ++K   + S+ +R L++   +        P + A ST ++      +   A +   
Sbjct: 230 SYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFH 289

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
              +   +KP+   +N++I   CK   ++ A  VL++M  +  + P+ +TYS +I G   
Sbjct: 290 EMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQMT-TDGAQPDTVTYSCMIHGYAT 347

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            GR +EA ++F EM  K  ++P+ +T N  +   C+ G+   A +  + M   G  P++F
Sbjct: 348 LGRLKEAAKMFREM-KKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF 406

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +Y TL++G+  EG   +   +F+ MK+  +  +   +T LI+ + + G VD+A+ +  EM
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +++G   D+VT++ ++    R G++ +A+    ++   GI  N A Y  ++   C  G L
Sbjct: 467 QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGL 526

Query: 431 EKAIELLRLMLCRGF-LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            KA EL+  M+ +G   P     + ++  LCK G   DA        ++G +P   ++  
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNS 586

Query: 490 LVELICRGRKLLFAFELLDEL 510
           L++  C   K+  AF++LD +
Sbjct: 587 LIDGYCLVGKMDKAFKILDAM 607



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 176/345 (51%), Gaps = 2/345 (0%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM- 228
           +T L  L  +N+ + A N L +    L   PN   ++I++K  C     + A ++L+ M 
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           K+     P+++ YST+I G    G   +A  LF EM ++  + PD +TYN++ID  C+  
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEM-TRQGVKPDVVTYNLIIDALCKAR 314

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            +D+A+ ++  M  +G  P+   Y+ +++G+   G+L+EA ++F EMK   L P+ +   
Sbjct: 315 AMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCN 374

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           + +   C+ GR  EA E    M  +G K DI ++  +L G   EG   + +G+   +  +
Sbjct: 375 SFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN 434

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           GI  N   + I+++   ++G ++ A+ +   M  +G  P   T + ++    + G   DA
Sbjct: 435 GIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDA 494

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                 +V  G +P +  ++ +++  C    L+ A EL+ E++ K
Sbjct: 495 MEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINK 539



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 212/454 (46%), Gaps = 15/454 (3%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E E   A  +F+ ++ Q G   +  TY  I+D L + +  +  + VLRQMT +  +    
Sbjct: 278 EGETGKACSLFHEMTRQ-GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTV 336

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQVDLAQNF 188
            +  ++  ++     +   +MF ++    +++  +  I TC   L  L +  +   A  F
Sbjct: 337 TYSCMIHGYATLGRLKEAAKMFREM----KKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
              S      KP+   +  L+  +   G       +   MK + ++  N   ++ LI   
Sbjct: 393 FD-SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIA-ANCHVFTILIHAY 450

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
            K G   +A+ +F EM  +  + PD +TY+ +I  F R G++  A +    M   G  PN
Sbjct: 451 AKRGMVDDAMLIFTEM-QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKN-FLLKPDTIGYTTLINCFCRAGRVDEALELL 367
              Y++++ GFC  G L +AKE+  EM N  + +PD + ++++IN  C+ GRV +A ++ 
Sbjct: 510 TAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
               + G +  ++TFN ++ G C  GK+++A  +L+ +   G+  +  +Y  +L+   + 
Sbjct: 570 DLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKN 629

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G +   + L R M  +G  P+  T   +L  L +AG    A      ++E G       +
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689

Query: 488 ALLVELICR---GRKLLFAFELLDELVIKESGTI 518
            +++  +CR     + +  F+ L  + +K S TI
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITI 723



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 181/390 (46%), Gaps = 12/390 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IF T  +Q+G + +  TY+T++   +R  +         QM     + +  ++ +++
Sbjct: 459 AMLIF-TEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSII 517

Query: 138 K----HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           +    H       E V EM +K  P    +P +   S+ +N L +  +V  A +    + 
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIP----RPDIVFFSSVINSLCKDGRVMDAHDIFDLAT 573

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
             +  +P    FN LI  +C  G ++ AF++L  M+   +  P+++TY+TL+DG  KNGR
Sbjct: 574 D-IGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVE-PDIVTYNTLLDGYFKNGR 631

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             + + LF EM  K  + P+ +TY +++ G  R G+   A+K    M  +G    V  Y 
Sbjct: 632 INDGLTLFREMQRKG-VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++ G C+     EA  +F ++    +K       T+IN   +  R +EA EL   +   
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   +  T+ +++  L ++G +E+A  M   +   GI         ++    +KGE+ KA
Sbjct: 751 GLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAG 463
              L  +  +  L   +T++ +L    + G
Sbjct: 811 GNYLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 4/273 (1%)

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            V +E   +Q++ P   TY+ L+D  C+  R    + LF  ++ +  +  D +T N L+ 
Sbjct: 142 RVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCIL-RTGLKMDQITANTLLK 200

Query: 283 GFCRGGKVDRAKKI-MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFL 339
             C   + + A  + +  M   GC PN  +Y+ ++   C     Q A ++   M  +   
Sbjct: 201 CLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGA 260

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
             PD + Y+T+I+ F   G   +A  L  EM  +G K D+VT+N+I+  LC+   +++A 
Sbjct: 261 CSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAE 320

Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
            +L ++  DG   +  +Y  +++     G L++A ++ R M  RG +P+  T N  L  L
Sbjct: 321 LVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASL 380

Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           CK G +++AA     +   G KP+  S+  L+ 
Sbjct: 381 CKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLH 413



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 8/179 (4%)

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG- 400
           P    Y  L++C CRA R D  L L   +   G K D +T N +L  LC   + EEA+  
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL--PHYATSNELLVR 458
           +L ++   G   N  SY IVL   C     ++A++LL++M  +G    P     + ++  
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
               G    A      +   G KP+  ++ L+++ +C+ R +  A     ELV+++  T
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKA-----ELVLRQMTT 328


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 215/449 (47%), Gaps = 45/449 (10%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T+L  L   K++E  + ++R+M   +C  +E  F   ++ F    L +R +E+  ++
Sbjct: 9   TYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 68

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
            P     P +   ST +N   E  +VD A   LK  N  L  +PNT  +N  +K  C  G
Sbjct: 69  -PKYGCTPDVIIYSTLVNGFSEHGRVDEA---LKLLNTML-CRPNTVCYNAALKGLCIAG 123

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
             E   E++ EM +     PN  T+STLI+ LC+N     A+E+ E+M  K   +PD ++
Sbjct: 124 RWEEVGELIAEMVRKDCP-PNDATFSTLINSLCQNRLVEYAVEVLEQM-QKYGYMPDVVS 181

Query: 277 YNVLIDGFCRGGKVDRAKKIMEF--------------------------------MKNNG 304
           YN +I  F    + D A K+++                                 M    
Sbjct: 182 YNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKD 241

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C  N   +  L++  C+ G++++A EVF+ M  +   PD + Y++LIN F   G  + A 
Sbjct: 242 CRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAF 301

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
           +L + M    C+ADI ++N  L GLC   + ++A  ++  +  +    N+ ++ I+++  
Sbjct: 302 DLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSL 358

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           CQKG + +AI++   M   G  P   T N L+    + G  +D   AL  L  M  +P++
Sbjct: 359 CQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDD---ALKFLSTMPCEPDT 415

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIK 513
            S+  +++ +CR  +   A +L+ E++ K
Sbjct: 416 ISYNSILKGLCRAERWKDAEKLVTEMLRK 444



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 175/351 (49%), Gaps = 40/351 (11%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+T  +N ++K  C     E A E+++EM ++   +PN +T++T I   C+NG   
Sbjct: 1   MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNS-CHPNEVTFATQIRAFCQNGLLD 59

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF---------------- 299
            A+EL E+M  K    PD + Y+ L++GF   G+VD A K++                  
Sbjct: 60  RAVELLEQM-PKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKG 118

Query: 300 ----------------MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
                           M    C PN   ++TL+N  C+   ++ A EV ++M+ +   PD
Sbjct: 119 LCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPD 178

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y T+I+CF    R D+AL+LLK M    CK D ++FN +L  LC+  +  +A+ ++ 
Sbjct: 179 VVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVA 235

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           K+      +N+ ++ I+++  CQ G+++ AIE+  LM     +P   T + L+    + G
Sbjct: 236 KMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG 295

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           + E  A  LF    M  + +  S+   ++ +C   +   A EL+ ++V ++
Sbjct: 296 LDE-MAFDLFR--SMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTED 343



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 176/373 (47%), Gaps = 46/373 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++ NT+  +     N   Y   L  L    ++E V  ++ +M  + C  ++  F  L+
Sbjct: 96  ALKLLNTMLCRP----NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLI 151

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                  L E  +E+  ++       P + + +T ++   +  + D A   LK     + 
Sbjct: 152 NSLCQNRLVEYAVEVLEQMQKYGY-MPDVVSYNTIISCFSDQARADDALKLLK----SML 206

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            KP+T  FN ++K  CK      A E++ +M K      N +T++ LID LC+NG+ ++A
Sbjct: 207 CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRI-NEMTFNILIDSLCQNGQVKDA 265

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGF--------------------------------C 285
           IE+FE ++ K + +PD +TY+ LI+GF                                C
Sbjct: 266 IEVFE-LMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLC 324

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
              + D A +++  M    C PN   +  L++  C++G +  A +V+++M  + + PD  
Sbjct: 325 MAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIF 384

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  LIN +   GR+D+AL+ L  M    C+ D +++N IL GLCR  + ++A  ++ ++
Sbjct: 385 TYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEM 441

Query: 406 WYDGIYLNKASYR 418
                  N+ +++
Sbjct: 442 LRKNCTPNEVTFK 454


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 181/339 (53%), Gaps = 7/339 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESA 221
           P  +  +  +  +I S ++  A+N     ++ LR  ++P    FN L+   CK   L +A
Sbjct: 240 PEARQFNMLMRDMIRSGKLASARNVF---DEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 296

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +   M K+ ++ P++ TY   I GLCK GR ++A+E+FEEM  +  + P+ +    LI
Sbjct: 297 NALRGLMAKAGIA-PDVYTYGAFIQGLCKTGRIQDAMEMFEEMCER-GLNPNTVVLTTLI 354

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           D  C+ G V    ++   M   G   ++  Y  L+NGFC+   ++ A ++ +EM+   LK
Sbjct: 355 DAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLK 414

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + YTTLI+  C+ G +D A+E+ +EM + G   D VT+  ++ GL + G+  +A  +
Sbjct: 415 PDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERI 474

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L ++   G+  +  +Y +V++  C+ G+++   + L+ M  +G  P   T N ++   C 
Sbjct: 475 LCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCS 534

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
            G  ++A + L  ++ +G  P   ++ +L++  C+  K+
Sbjct: 535 LGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKV 573



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 154/275 (56%), Gaps = 1/275 (0%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P    ++ L+  + ++G+   A  +F+EM+ +  + P  +T+N L+ G C+   ++ A  
Sbjct: 240 PEARQFNMLMRDMIRSGKLASARNVFDEMLRR-GVQPTVVTFNTLMSGMCKASDLNNANA 298

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   M   G  P+V+ Y   + G CK G++Q+A E+F+EM    L P+T+  TTLI+  C
Sbjct: 299 LRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHC 358

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G V   LEL  EM  RG KAD+V +N ++ G CR   ++ A  ++E++  DG+  +K 
Sbjct: 359 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 418

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y  +++  C++GEL+ A+E+ + M   G      T   L+  L KAG + DA   L  +
Sbjct: 419 TYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEM 478

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +E G +P++ ++ ++++  C+   +   F+ L E+
Sbjct: 479 MEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEM 513



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 102/209 (48%)

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
           + G  P    +  LM    + GKL  A+ VFDEM    ++P  + + TL++  C+A  ++
Sbjct: 235 DAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLN 294

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  L   M + G   D+ T+   + GLC+ G+I++A+ M E++   G+  N      ++
Sbjct: 295 NANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLI 354

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C++G++   +EL   M  RG        N L+   C+    + A   +  + + G K
Sbjct: 355 DAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLK 414

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
           P+  ++  L++  C+  +L  A E+  E+
Sbjct: 415 PDKVTYTTLIDGCCKEGELDTAMEMKQEM 443



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 3/167 (1%)

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           ++ L+N   R   V EA      + + G   +   FN+++  + R GK+  A  + +++ 
Sbjct: 213 WSDLMN---RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEML 269

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             G+     ++  +++  C+  +L  A  L  LM   G  P   T    +  LCK G  +
Sbjct: 270 RRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQ 329

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           DA      + E G  P +     L++  C+   +    EL  E+  +
Sbjct: 330 DAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR 376


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 218/457 (47%), Gaps = 67/457 (14%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           K+E   +V+R+M  +        +  ++ +  N S  E    +F ++     ++  L A 
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-----KRGGLVAD 517

Query: 170 STCLNLLIESN-QVDLAQNFLKYSNQ--HLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
                ++++S  +  L +   K+ N+   +   PN   +  LI  + K   +  A E+ +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI---------------L 271
            M  S+   PN++TYS LIDG CK G+  +A ++FE M     +                
Sbjct: 578 TML-SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+ +TY  L+DGFC+  +V+ A+K+++ M   GC PN   Y  L++G CK GKL EA+EV
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 332 FDEM-----------------KNFLLK------------------PDTIGYTTLINCFCR 356
             EM                 + F +K                  P+ + YT +I+  C+
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G+ DEA +L++ M+E+GC+ ++VT+  ++ G    GKIE  L +LE++   G+  N  +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           YR++++  C+ G L+ A  LL  M    +  H A   +++      G  ++   +L  L 
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI-----EGFNKEFIESLGLLD 871

Query: 477 EMG---FKPESDSWALLVELICRGRKLLFAFELLDEL 510
           E+G     P    + LL++ + + ++L  A  LL+E+
Sbjct: 872 EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 214/449 (47%), Gaps = 25/449 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A + FN + E  G   N  TY  ++    + KK    + +   M  E C  +   +  L+
Sbjct: 537 ARKWFNEMREV-GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595

Query: 138 KHF-------SNCSLHERV--------LEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
                       C + ER+        ++M+ K +    E+P++      L+   +S++V
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITY 241
           + A+  L   +     +PN  +++ LI   CK G L+ A EV  EM  S+  +P  L TY
Sbjct: 656 EEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFPATLYTY 712

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S+LID   K  R   A ++  +M+ ++   P+ + Y  +IDG C+ GK D A K+M+ M+
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC PNV  YT +++GF   GK++   E+ + M +  + P+ + Y  LI+  C+ G +D
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  LL+EMK+         +  ++ G  +E    E+LG+L+++  D      + YR+++
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLI 889

Query: 422 NFSCQKGELEKAIELLR--LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +   +   LE A+ LL          + + +T N L+  LC A   E A      + + G
Sbjct: 890 DNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLD 508
             PE  S+  L++ + R  K+  A  LLD
Sbjct: 950 VIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 209/457 (45%), Gaps = 40/457 (8%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM------ 137
           T+ E + F  +   Y  ++  L     FE     L +M   +C  +   +  L+      
Sbjct: 291 TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--H 195
           K    C   +RVL M      +    PS K  ++ ++    S     A   LK   +  H
Sbjct: 351 KQLGRC---KRVLNMMM----MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 196 LRLKPNTCIFNILIKHHC-KRGTLESAFEVLKEMKKSQMSYP----NLITYSTLIDGLCK 250
           +   P   ++NILI   C  + +L      L E   S+M       N I  S+    LC 
Sbjct: 404 M---PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G++ +A  +  EM+ +   +PD  TY+ +++  C   K++ A  + E MK  G   +V+
Sbjct: 461 AGKYEKAFSVIREMIGQG-FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            YT +++ FCK G +++A++ F+EM+     P+ + YT LI+ + +A +V  A EL + M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKL--------------WYD--GIYLNK 414
              GC  +IVT++ ++ G C+ G++E+A  + E++               YD      N 
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +L+  C+   +E+A +LL  M   G  P+    + L+  LCK G  ++A      
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + E GF     +++ L++   + ++   A ++L +++
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 195/462 (42%), Gaps = 59/462 (12%)

Query: 51  VDARKRSRFI-------SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD 103
           V  RK  +F+       S    I +++    P   +  F     Q G+ H    Y  ++D
Sbjct: 114 VFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVD 173

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM--KHFSNCSLHERVLEMFHKIHPITR 161
            + R    +  +  L+Q+  +  +   G FLN++  KH  N S                 
Sbjct: 174 LIVRDDDEKVPEEFLQQIRDDDKEVF-GEFLNVLVRKHCRNGSFS--------------- 217

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
                          I   ++   ++F        R +P+   +N LI+   K   L+SA
Sbjct: 218 ---------------IALEELGRLKDF--------RFRPSRSTYNCLIQAFLKADRLDSA 254

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             + +EM  + +      T       LCK G++REA+ L E     +  +PD + Y  LI
Sbjct: 255 SLIHREMSLANLRMDGF-TLRCFAYSLCKVGKWREALTLVE----TENFVPDTVFYTKLI 309

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C     + A   +  M+   C PNV  Y+TL+ G   + +L   K V + M      
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC--REGKIEEAL 399
           P    + +L++ +C +G    A +LLK+M + G     V +NI++G +C  ++    + L
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429

Query: 400 GMLEKLWYD----GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            + EK + +    G+ LNK +        C  G+ EKA  ++R M+ +GF+P  +T +++
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           L  LC A   E A +    +   G   +  ++ ++V+  C+ 
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 218/457 (47%), Gaps = 67/457 (14%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           K+E   +V+R+M  +        +  ++ +  N S  E    +F ++     ++  L A 
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-----KRGGLVAD 517

Query: 170 STCLNLLIESN-QVDLAQNFLKYSNQ--HLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
                ++++S  +  L +   K+ N+   +   PN   +  LI  + K   +  A E+ +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI---------------L 271
            M  S+   PN++TYS LIDG CK G+  +A ++FE M     +                
Sbjct: 578 TML-SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+ +TY  L+DGFC+  +V+ A+K+++ M   GC PN   Y  L++G CK GKL EA+EV
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 332 FDEM-----------------KNFLLK------------------PDTIGYTTLINCFCR 356
             EM                 + F +K                  P+ + YT +I+  C+
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G+ DEA +L++ M+E+GC+ ++VT+  ++ G    GKIE  L +LE++   G+  N  +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           YR++++  C+ G L+ A  LL  M    +  H A   +++      G  ++   +L  L 
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI-----EGFNKEFIESLGLLD 871

Query: 477 EMG---FKPESDSWALLVELICRGRKLLFAFELLDEL 510
           E+G     P    + LL++ + + ++L  A  LL+E+
Sbjct: 872 EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 214/449 (47%), Gaps = 25/449 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A + FN + E  G   N  TY  ++    + KK    + +   M  E C  +   +  L+
Sbjct: 537 ARKWFNEMREV-GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595

Query: 138 KHFSN-------CSLHERV--------LEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
                       C + ER+        ++M+ K +    E+P++      L+   +S++V
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITY 241
           + A+  L   +     +PN  +++ LI   CK G L+ A EV  EM  S+  +P  L TY
Sbjct: 656 EEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFPATLYTY 712

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S+LID   K  R   A ++  +M+ ++   P+ + Y  +IDG C+ GK D A K+M+ M+
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             GC PNV  YT +++GF   GK++   E+ + M +  + P+ + Y  LI+  C+ G +D
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A  LL+EMK+         +  ++ G  +E    E+LG+L+++  D      + YR+++
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLI 889

Query: 422 NFSCQKGELEKAIELLR--LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           +   +   LE A+ LL          + + +T N L+  LC A   E A      + + G
Sbjct: 890 DNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLD 508
             PE  S+  L++ + R  K+  A  LLD
Sbjct: 950 VIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 209/457 (45%), Gaps = 40/457 (8%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM------ 137
           T+ E + F  +   Y  ++  L     FE     L +M   +C  +   +  L+      
Sbjct: 291 TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--H 195
           K    C   +RVL M      +    PS K  ++ ++    S     A   LK   +  H
Sbjct: 351 KQLGRC---KRVLNMMM----MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 196 LRLKPNTCIFNILIKHHC-KRGTLESAFEVLKEMKKSQMSYP----NLITYSTLIDGLCK 250
           +   P   ++NILI   C  + +L      L E   S+M       N I  S+    LC 
Sbjct: 404 M---PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G++ +A  +  EM+ +   +PD  TY+ +++  C   K++ A  + E MK  G   +V+
Sbjct: 461 AGKYEKAFSVIREMIGQG-FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            YT +++ FCK G +++A++ F+EM+     P+ + YT LI+ + +A +V  A EL + M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKL--------------WYD--GIYLNK 414
              GC  +IVT++ ++ G C+ G++E+A  + E++               YD      N 
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +L+  C+   +E+A +LL  M   G  P+    + L+  LCK G  ++A      
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + E GF     +++ L++   + ++   A ++L +++
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 195/462 (42%), Gaps = 59/462 (12%)

Query: 51  VDARKRSRFI-------SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILD 103
           V  RK  +F+       S    I +++    P   +  F     Q G+ H    Y  ++D
Sbjct: 114 VFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVD 173

Query: 104 KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM--KHFSNCSLHERVLEMFHKIHPITR 161
            + R    +  +  L+Q+  +  +   G FLN++  KH  N S                 
Sbjct: 174 LIVRDDDEKVPEEFLQQIRDDDKEVF-GEFLNVLVRKHCRNGSFS--------------- 217

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
                          I   ++   ++F        R +P+   +N LI+   K   L+SA
Sbjct: 218 ---------------IALEELGRLKDF--------RFRPSRSTYNCLIQAFLKADRLDSA 254

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             + +EM  + +      T       LCK G++REA+ L E     +  +PD + Y  LI
Sbjct: 255 SLIHREMSLANLRMDGF-TLRCFAYSLCKVGKWREALTLVE----TENFVPDTVFYTKLI 309

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G C     + A   +  M+   C PNV  Y+TL+ G   + +L   K V + M      
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC--REGKIEEAL 399
           P    + +L++ +C +G    A +LLK+M + G     V +NI++G +C  ++    + L
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429

Query: 400 GMLEKLWYD----GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            + EK + +    G+ LNK +        C  G+ EKA  ++R M+ +GF+P  +T +++
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           L  LC A   E A +    +   G   +  ++ ++V+  C+ 
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 138/304 (45%), Gaps = 17/304 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+   +SE  GF     TY++++D+  + K+ +    VL +M   +C  +  I+  ++
Sbjct: 693 AQEVKTEMSEH-GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
                    +      +K+  +  EK   P++   +  ++      +++     L+    
Sbjct: 752 DGLCKVGKTDEA----YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGR 253
              + PN   + +LI H CK G L+ A  +L+EMK  Q  +P +   Y  +I+G   N  
Sbjct: 808 K-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK--QTHWPTHTAGYRKVIEGF--NKE 862

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN-- 311
           F E++ L +E + +D   P    Y +LID   +  +++ A +++E +         ++  
Sbjct: 863 FIESLGLLDE-IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 921

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y +L+   C   K++ A ++F EM    + P+   + +LI    R  ++ EAL LL  + 
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFIS 981

Query: 372 ERGC 375
              C
Sbjct: 982 HMVC 985


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 229/469 (48%), Gaps = 27/469 (5%)

Query: 64  AAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTY 123
             I+L     EP  A   FN + E  G++H+  TYA I+  L  +     +D++L ++  
Sbjct: 62  VVITLNNLRNEPSLAFSYFNQLKES-GYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIK 120

Query: 124 ETCKFHEGIFLNLMKHFSNCSLHER--VL--------------EMFHKIHPITRE----- 162
           +      GI +NL +   +   +E   VL               MF +   +  +     
Sbjct: 121 KDGNLDFGI-VNLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCG 179

Query: 163 -KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
             P + + +  +N L+ES +VD+A    +   +   L PN   + I IK  C++G L  A
Sbjct: 180 FAPQILSCNFLMNRLVESRKVDMAIAIYR-QLKAFGLNPNDYTYTIAIKGFCRKGNLAEA 238

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            +V ++M++S ++ PN  +Y+T I+GLC +GR     ++ +++++  +I  D   Y V+I
Sbjct: 239 IDVFRDMEESGVT-PNSFSYTTFIEGLCLHGRSDLGFKVLQDVINA-KIPMDVFAYTVVI 296

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            GFC   K+  A+ I+  M+  G  P+V+ Y  L++G+C  G L +A  + DEM +  +K
Sbjct: 297 RGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVK 356

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            + +  ++++    + G   E     KE K+ G   D   +N+++  LC+ GK+EEA+ +
Sbjct: 357 TNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVEL 416

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           L ++    +  +  +Y  V++    KG++  A+ + R M   G  P   T N L     +
Sbjct: 417 LVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSR 476

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
            G+ ++A   L  +   G KP++ +  +++E +C G K+  A    D L
Sbjct: 477 NGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL 525



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 18/264 (6%)

Query: 162 EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           E+  L+  S  +N   E+N V+ A   L   ++  R+      F +L  + C  G  E A
Sbjct: 526 EEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLL-GNLCSEGDSEKA 584

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
             +L+ M    ++ P +I YS +I  L + G   +A  +F  +V +  + PD +TY ++I
Sbjct: 585 LCLLETMVALNIN-PTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRG-LAPDVITYTIMI 642

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK---------------EGKLQ 326
           +G+CR  K+  A  ++  MKN G  P+V  YT L+N   K               +  + 
Sbjct: 643 NGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMM 702

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +   ++ EMK+  +KPD I YT LI+  C+   + +A+ L  EM +RG   D VT+  +L
Sbjct: 703 DPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALL 762

Query: 387 GGLCREGKIEEALGMLEKLWYDGI 410
            G C  G I++A+ + +++   GI
Sbjct: 763 SGYCNVGNIKKAVVLFDEMLNKGI 786



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 203/456 (44%), Gaps = 32/456 (7%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQK--GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
           S+++   +   A E+ N   E K  G   + A Y  ++D L +  K E    +L +M  +
Sbjct: 364 SILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGK 423

Query: 125 TCKFHEGIFLNLMKHFSNCSLHERV---LEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
             K    I +N     S   L  +V   L ++ ++  I   KP +   +        +  
Sbjct: 424 --KMVPDI-INYTTVISGYFLKGKVVDALNIYREMKDIGH-KPDIVTYNVLAGGFSRNGL 479

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
              A + L Y      +KP+T   N++I+  C  G ++ A      +++  +       Y
Sbjct: 480 TQEALSLLNYMETQ-GVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE-----NY 533

Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
           S +++G C+     +A  L   +  + +IL  A ++  L+   C  G  ++A  ++E M 
Sbjct: 534 SAMVNGYCEANHVNKAFALLIRLSKQGRILKKA-SFFKLLGNLCSEGDSEKALCLLETMV 592

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
               NP +  Y+ ++    + G++++A+ VF+ + +  L PD I YT +IN +CR  ++ 
Sbjct: 593 ALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMK 652

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCR-----------EGKIEEALGMLEKLWYD-- 408
           EA  +L +MK RG + D++T+ ++L    +             K +E +     LW +  
Sbjct: 653 EAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMK 712

Query: 409 --GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
              I  +   Y ++++  C+   ++ AI L   M+ RG  P   T   LL   C  G  +
Sbjct: 713 DMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIK 772

Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            A +    ++  G +P++ + ++L   I + RK+ F
Sbjct: 773 KAVVLFDEMLNKGIRPDAHTMSVL-HCILKVRKVHF 807



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 164/365 (44%), Gaps = 52/365 (14%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ P+   +  +I  +  +G +  A  + +EMK      P+++TY+ L  G  +NG  +E
Sbjct: 424 KMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHK-PDIVTYNVLAGGFSRNGLTQE 482

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME-----------FMKNNGC 305
           A+ L   M ++  + PD +T+N++I+G C GGKVD A+   +            M N  C
Sbjct: 483 ALSLLNYMETQG-VKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYC 541

Query: 306 NPNVFN--------------------YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
             N  N                    +  L+   C EG  ++A  + + M    + P  I
Sbjct: 542 EANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMI 601

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y+ +I    +AG +++A  +   + +RG   D++T+ I++ G CR  K++EA  +L  +
Sbjct: 602 MYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDM 661

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL----------------PHY 449
              GI  +  +Y ++LN +C K +L  +   L  M  +  +                P  
Sbjct: 662 KNRGIEPDVITYTVLLN-NCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDV 720

Query: 450 ATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
                L+ + CK    +D AI LF  +++ G  P++ ++  L+   C    +  A  L D
Sbjct: 721 ICYTVLIDKHCKTNNIQD-AINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFD 779

Query: 509 ELVIK 513
           E++ K
Sbjct: 780 EMLNK 784



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 57/314 (18%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD-----------Q 269
           AF    ++K+S  S+ +  TY+ ++  LC  G  R+   +  E++ KD           +
Sbjct: 76  AFSYFNQLKESGYSH-DPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFE 134

Query: 270 ILPDAL---TYNVLI---DGFCR----GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
            L D +   +++VL+   D   +     G  D+A  ++   K+ G  P + +   LMN  
Sbjct: 135 ALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRL 194

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            +  K+  A  ++ ++K F L P+   YT  I  FCR G + EA+++ ++M+E G   + 
Sbjct: 195 VESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNS 254

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            ++   + GLC  G+ +    +L+ +    I ++  +Y +V+   C + +L++A  +LR 
Sbjct: 255 FSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILRE 314

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M                                    + GF P+   +  L+   C    
Sbjct: 315 M-----------------------------------EKQGFAPDVYVYCALISGYCMVGN 339

Query: 500 LLFAFELLDELVIK 513
           LL A  L DE+V K
Sbjct: 340 LLKALALHDEMVSK 353


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 221/433 (51%), Gaps = 14/433 (3%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
            L+K +     AL+++   +  KG   +N T + +L+ L +  K E  + VL+ +     
Sbjct: 215 GLLKSDDGAGAALDLYRE-AIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
              E I+  ++  +      +R +    ++      +P+  A ++ ++   E   +D A+
Sbjct: 274 VPGEVIYNTIVNGYCQIGDMDRAILTIEQMES-RGLRPNCIAFNSVIDKFCEMQMIDKAE 332

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
            ++K       + P+   +NILI  + +       F++L+EM+++    PN+I+Y +LI+
Sbjct: 333 EWVKKMVGK-GIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG-EKPNVISYGSLIN 390

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
            LCK+G+  EA  +  +MV +  +LP+A  YN+LIDG C  GK+  A +  + M  NG  
Sbjct: 391 CLCKDGKILEAEMVLRDMVGRG-VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIG 449

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
             +  Y +L+ G CK GKL+EA+E+F  + +    PD I Y +LI+ +  AG   + LEL
Sbjct: 450 ATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLEL 509

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN--FS 424
            + MK+ G K  I TF+ ++ G  +EG     + + E L+ + + +N +  R+V N    
Sbjct: 510 YETMKKLGLKPTINTFHPLISGCSKEG-----IKLKETLFNEMLQMNLSPDRVVYNAMIH 564

Query: 425 C--QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           C  + G ++KA  L + M+  G  P   T N L++   K G   +    +  +   G  P
Sbjct: 565 CYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIP 624

Query: 483 ESDSWALLVELIC 495
           E+D+++LL++  C
Sbjct: 625 EADTYSLLIQGHC 637



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 187/383 (48%), Gaps = 7/383 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E +G   N   + +++DK    +  +  +  +++M  +        +  L+  +    + 
Sbjct: 304 ESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVF 363

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            R  ++  ++     EKP++ +  + +N L +  ++  A+  L+       L PN  I+N
Sbjct: 364 SRCFQILEEMEE-NGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVL-PNANIYN 421

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +LI   C  G L  A     EM K+ +    ++TY++LI GLCK G+ +EA E+F  + S
Sbjct: 422 MLIDGSCTVGKLREALRFFDEMSKNGIG-ATIVTYNSLIKGLCKMGKLKEAEEMFFLITS 480

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG-KL 325
                PD +TYN LI G+   G   +  ++ E MK  G  P +  +  L++G  KEG KL
Sbjct: 481 TGHC-PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKL 539

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           +E   +F+EM    L PD + Y  +I+C+   G V +A  L KEM + G + D  T+N +
Sbjct: 540 KET--LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSL 597

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + G  +EGK+ E   +++ +   G+     +Y +++   C   +   A    R ML  GF
Sbjct: 598 ILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGF 657

Query: 446 LPHYATSNELLVRLCKAGMAEDA 468
           LP+    NEL   L K G  ++A
Sbjct: 658 LPNVCICNELSTGLRKDGRLQEA 680



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 174/343 (50%), Gaps = 6/343 (1%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK 229
           S  LN L +  +V+ A+  LK   +H  L P   I+N ++  +C+ G ++ A   +++M+
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEH-GLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME 304

Query: 230 KSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
              +  PN I ++++ID  C+     +A E  ++MV K  I P   TYN+LIDG+ R   
Sbjct: 305 SRGLR-PNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKG-IAPSVETYNILIDGYGRLCV 362

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
             R  +I+E M+ NG  PNV +Y +L+N  CK+GK+ EA+ V  +M    + P+   Y  
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           LI+  C  G++ EAL    EM + G  A IVT+N ++ GLC+ GK++EA  M   +   G
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
              +  +Y  +++     G  +K +EL   M   G  P   T + L+    K G+     
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKE- 541

Query: 470 IALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
             LF  +++M   P+   +  ++        +  AF L  E+V
Sbjct: 542 -TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMV 583



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 171/350 (48%), Gaps = 38/350 (10%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ PN  ++N+LI   CK   +  A ++  EM    +  PN +T++TLIDG CK G    
Sbjct: 96  KVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNL-VPNRVTFNTLIDGYCKAGEVDV 154

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT-- 314
           AI L E M  K+++ P  +T+N L+ G C+  +++ A+ ++  +K NG  P+ F Y+   
Sbjct: 155 AIGLRERM-KKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIF 213

Query: 315 ----------------------------------LMNGFCKEGKLQEAKEVFDEMKNFLL 340
                                             L+NG CKEGK+++A+EV   +    L
Sbjct: 214 DGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P  + Y T++N +C+ G +D A+  +++M+ RG + + + FN ++   C    I++A  
Sbjct: 274 VPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEE 333

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
            ++K+   GI  +  +Y I+++   +     +  ++L  M   G  P+  +   L+  LC
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLC 393

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           K G   +A + L  +V  G  P ++ + +L++  C   KL  A    DE+
Sbjct: 394 KDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM 443



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 171/346 (49%), Gaps = 38/346 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   FN LI  +CK G ++ A  + + MKK ++  P++IT+++L+ GLCK  R  EA
Sbjct: 132 LVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVE-PSIITFNSLLSGLCKARRIEEA 190

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGF--------------------------------- 284
             +  E +  +  +PD  TY+++ DG                                  
Sbjct: 191 RCMLNE-IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILL 249

Query: 285 ---CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
              C+ GKV++A+++++ +  +G  P    Y T++NG+C+ G +  A    ++M++  L+
Sbjct: 250 NGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLR 309

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ I + ++I+ FC    +D+A E +K+M  +G    + T+NI++ G  R         +
Sbjct: 310 PNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQI 369

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           LE++  +G   N  SY  ++N  C+ G++ +A  +LR M+ RG LP+    N L+   C 
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
            G   +A      + + G      ++  L++ +C+  KL  A E+ 
Sbjct: 430 VGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 2/285 (0%)

Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
           C    + S    L +  + +   P+      +++ L ++ +F   ++LF+EMV      P
Sbjct: 6   CSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG-FRP 64

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
           D L Y   +    + G +  A ++ E MK     PNVF Y  L+ G CKE ++++A+++F
Sbjct: 65  DKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLF 124

Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
            EM    L P+ + + TLI+ +C+AG VD A+ L + MK+   +  I+TFN +L GLC+ 
Sbjct: 125 GEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA 184

Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE-LEKAIELLRLMLCRGFLPHYAT 451
            +IEEA  ML ++  +G   +  +Y I+ +   +  +    A++L R  + +G      T
Sbjct: 185 RRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYT 244

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
            + LL  LCK G  E A   L  LVE G  P    +  +V   C+
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQ 289



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 149/331 (45%), Gaps = 19/331 (5%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+ G   N  +Y ++++ L +  K    + VLR M       +  I+  L+         
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKL 433

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQN--FLKYSNQHLRLKP 200
              L  F ++      K  + A     N LI+      ++  A+   FL  S  H    P
Sbjct: 434 REALRFFDEMS-----KNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC---P 485

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG-RFREAIE 259
           +   +N LI  +   G  +   E+ + MKK  +  P + T+  LI G  K G + +E   
Sbjct: 486 DVITYNSLISGYSNAGNSQKCLELYETMKKLGLK-PTINTFHPLISGCSKEGIKLKET-- 542

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM+  + + PD + YN +I  +   G V +A  + + M + G  P+   Y +L+ G 
Sbjct: 543 LFNEMLQMN-LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            KEGKL E K++ D+MK   L P+   Y+ LI   C     + A    +EM E G   ++
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
              N +  GL ++G+++EA  +  ++  +G+
Sbjct: 662 CICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 1/265 (0%)

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           +C   +    +    + + ++  LP      ++++      K D    + + M   G  P
Sbjct: 5   VCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRP 64

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y   M    K G L+ A E+F+ MK   + P+   Y  LI   C+  R+ +A +L 
Sbjct: 65  DKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLF 124

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM  R    + VTFN ++ G C+ G+++ A+G+ E++  + +  +  ++  +L+  C+ 
Sbjct: 125 GEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA 184

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDS 486
             +E+A  +L  + C GF+P   T + +   L K+     AA+ L+   +  G K ++ +
Sbjct: 185 RRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYT 244

Query: 487 WALLVELICRGRKLLFAFELLDELV 511
            ++L+  +C+  K+  A E+L  LV
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLV 269


>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 727

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 205/411 (49%), Gaps = 9/411 (2%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC 143
           +VSE   +NHN A Y++I+    +    E  +A++  M  +  +   G++  LM  ++ C
Sbjct: 219 SVSEN--WNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARC 276

Query: 144 SLHERVLEMFHKIHP--ITREKPSLKAISTCLNLLIESNQVDLAQNFLK-YSNQHLRLKP 200
            +  + L +FHK+     T   P+       +NL  +  ++  A  F K    Q + L  
Sbjct: 277 HIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNR 336

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           NT  +++L+  + + G   +AF V ++M ++ +  P+ +TY+ L+   CK+ +   AI+L
Sbjct: 337 NT--YSMLVDGYVQLGDFANAFSVFEDMSEAGIE-PDWVTYNILLKAFCKSRQMTRAIQL 393

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
              M ++    P   TY  +IDGF + G V  A K +  MK  GC PN   Y  +M+   
Sbjct: 394 LGRMKTRG-CSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLV 452

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           + G++  A  V DEM+   ++P+   YTTL+  F   G +  A + LK + E   K  I+
Sbjct: 453 QLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPII 512

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           ++  +L   C+ G+++ A+ + E++ + G+ +N   +  +L+   Q+G++ +A  +++ M
Sbjct: 513 SYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKM 572

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
              GF P   +    +   CKAG  + A   +  + +   +P   ++ +L+
Sbjct: 573 RQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILI 623



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 171/350 (48%), Gaps = 4/350 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    S  ++    S  V+ A+ + + S        N  I++ +I  +CK G +E A  
Sbjct: 191 PNAATFSAIISGYGSSGNVEAAEKWFQRSVSE-NWNHNVAIYSSIIHAYCKAGNMERAEA 249

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK--DQILPDALTYNVLI 281
           ++ +M++  +    L  Y+ L+DG  +     + + +F ++ ++    + P A+TY  LI
Sbjct: 250 LVADMEEQGLE-ATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLI 308

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
           + + + GK+ +A +  + MK  G   N   Y+ L++G+ + G    A  VF++M    ++
Sbjct: 309 NLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIE 368

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           PD + Y  L+  FC++ ++  A++LL  MK RGC   I T+  I+ G  + G +  A   
Sbjct: 369 PDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKT 428

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
           + ++   G   N  +Y ++++   Q G++++A  ++  M   G  P++ +   L+     
Sbjct: 429 VSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFAS 488

Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G    A   L  + E+  KP   S+A L++  C+  ++  A  + +E+ 
Sbjct: 489 IGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMA 538



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 172/364 (47%), Gaps = 9/364 (2%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +++G  I+L     +   ALE    +  Q G   N  TY+ ++D   +   F    +V  
Sbjct: 302 VTYGCLINLYTKLGKMMKALEFCKEMKAQ-GITLNRNTYSMLVDGYVQLGDFANAFSVFE 360

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIE 178
            M+    +     +  L+K F       R +++  ++   TR   P+++   T ++  ++
Sbjct: 361 DMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMK--TRGCSPTIQTYITIIDGFMK 418

Query: 179 SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +  V +A  +   S   L   +PN   +N+++ +  + G ++ A  V+ EM+ + +  PN
Sbjct: 419 TGDVRMA--YKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQ-PN 475

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
             +Y+TL+ G    G    A +  + +    Q  P  ++Y  L+   C+ G++  A  + 
Sbjct: 476 FRSYTTLMQGFASIGEIGLAFKCLKRVNEITQ-KPPIISYASLLKACCKAGRMQNAIAVT 534

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           E M   G   N + + TL++G+ + G + EA  +  +M+     PD   YT+ +N  C+A
Sbjct: 535 EEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKA 594

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G + +A E ++EMK++  + ++ T+ I++ G       E+AL   +++   G+  +K  Y
Sbjct: 595 GDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLY 654

Query: 418 RIVL 421
             ++
Sbjct: 655 YCIV 658



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 136/284 (47%), Gaps = 5/284 (1%)

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ LI    K G  R A   FE+M +   I      YN LI  +     +  A   +E M
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAG-IDSSVHAYNNLIRAYIMAQNLQGAVSCVEEM 184

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           +  G  PN   ++ +++G+   G ++ A++ F    +     +   Y+++I+ +C+AG +
Sbjct: 185 EIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNM 244

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY---DGIYLNKASY 417
           + A  L+ +M+E+G +A +  +NI++ G  R     + L +  KL      G+     +Y
Sbjct: 245 ERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTY 304

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
             ++N   + G++ KA+E  + M  +G   +  T + L+    + G   +A      + E
Sbjct: 305 GCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSE 364

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE-SGTIQV 520
            G +P+  ++ +L++  C+ R++  A +LL  +  +  S TIQ 
Sbjct: 365 AGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQT 408



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 5/204 (2%)

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
           +Y  L++ + K G  + A+  F++M+   +      Y  LI  +  A  +  A+  ++EM
Sbjct: 125 DYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEM 184

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +  G   +  TF+ I+ G    G +E A    ++   +    N A Y  +++  C+ G +
Sbjct: 185 EIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNM 244

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF----GLVEMGFKPESDS 486
           E+A  L+  M  +G        N L+    +  + E   + +F      ++ G  P + +
Sbjct: 245 ERAEALVADMEEQGLEATLGLYNILMDGYARCHI-EAQCLNVFHKLKARIDTGLSPTAVT 303

Query: 487 WALLVELICRGRKLLFAFELLDEL 510
           +  L+ L  +  K++ A E   E+
Sbjct: 304 YGCLINLYTKLGKMMKALEFCKEM 327


>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 197/370 (53%), Gaps = 5/370 (1%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A   F     Q G+ H+  +Y +++D L + KKF+ +  ++ +M              +M
Sbjct: 136 AFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVM 195

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           +  +  S  +  +E F  +     +K +L A++T ++ L++ N V+ A +        + 
Sbjct: 196 RRLARASRWKDAIEAFRGMERFGVKKDTL-AMNTLMDALVKENSVEHANDVFVEFKDSIL 254

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+T  FN+LI   CK   +++A + + EMK+     P++I+Y+++++  C+   FR+ 
Sbjct: 255 LNPHT--FNVLIHGWCKARKMDNALKSMAEMKEHGFC-PDVISYTSIVEAYCREKDFRKV 311

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             +  EM  K    P+ +TY +++    +G ++ +A ++ E MK + C P+   Y++L+ 
Sbjct: 312 NSVLNEMEEKG-CPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIY 370

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              K G+L++A++VF++M      PD + Y T+I+  C   + ++AL+LL +M+E  CK 
Sbjct: 371 ILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKP 430

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+ T++ +L   CR  +++    +L  ++ + I L   +Y ++++  C+ G+LE A    
Sbjct: 431 DLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFF 490

Query: 438 RLMLCRGFLP 447
             M+ +G +P
Sbjct: 491 EEMVSKGLVP 500



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 201/419 (47%), Gaps = 8/419 (1%)

Query: 97  TYATILDKLARYKKF--EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH 154
           T  + +DK++   KF   + DAV++ +        E +   ++K FSN  +       F 
Sbjct: 84  TIDSDIDKISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSNDWI--PAFGFFK 141

Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
                T  + S+ + ++ +++L +  + DL    ++  ++ L    +      +++   +
Sbjct: 142 WAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDR-LGGYVSLATMTKVMRRLAR 200

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
               + A E  + M++  +   + +  +TL+D L K      A ++F E   KD IL + 
Sbjct: 201 ASRWKDAIEAFRGMERFGVK-KDTLAMNTLMDALVKENSVEHANDVFVEF--KDSILLNP 257

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
            T+NVLI G+C+  K+D A K M  MK +G  P+V +YT+++  +C+E   ++   V +E
Sbjct: 258 HTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNE 317

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
           M+     P+ + YT +++   +   + +ALE+ ++MK   C  D   ++ ++  L + G+
Sbjct: 318 MEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGR 377

Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
           +++A  + E +   G   +  +Y  +++ +C   + E A++LL  M      P   T + 
Sbjct: 378 LKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSP 437

Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           LL   C+    +  +  L  + +     E  +++LLV  +C+  KL  A    +E+V K
Sbjct: 438 LLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSK 496


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 195/368 (52%), Gaps = 8/368 (2%)

Query: 147 ERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTC 203
           +  LE+ H +     +  P + + ST +N   +    DL + +  Y N+ L  R+ PN  
Sbjct: 68  QEALELLHIMADDGGDCPPDVVSYSTVINGFFKEG--DLDKTYSTY-NEMLDQRISPNVV 124

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N +I   CK  T++ A EVL  M KS +  P+ +TY++++ G C +G+ +EAI   ++
Sbjct: 125 TYNSIIAALCKAQTVDKAMEVLTTMVKSGV-MPDCMTYNSIVHGFCSSGQPKEAIVFLKK 183

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M S D + PD +TYN L+D  C+ G+   A+KI + M   G  P +  Y TL+ G+  +G
Sbjct: 184 MRS-DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 242

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            L E   + D M    + P+   ++ L+  + +  +V+EA+ +  +M+++G   + VT+ 
Sbjct: 243 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 302

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++G LC+ G++E+A+   E++  +G+      Y  +++  C   + E+A EL+  ML R
Sbjct: 303 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 362

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
           G   +    N ++   CK G   ++      +V +G KP+  +++ L++  C   K+  A
Sbjct: 363 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422

Query: 504 FELLDELV 511
            +LL  +V
Sbjct: 423 TKLLASMV 430



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 226/462 (48%), Gaps = 12/462 (2%)

Query: 41  DPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYAT 100
           D    T +  +D R     +++ + I+ +   +    A+E+  T+  + G   +  TY +
Sbjct: 105 DKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV-KSGVMPDCMTYNS 163

Query: 101 ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF---SNCSLHERVLEMFHKIH 157
           I+       + +     L++M  +  +     + +LM +      C+   ++ +   K  
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK-- 221

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
                KP +    T L        +      L    ++  + PN  +F+IL+  + K+  
Sbjct: 222 --RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILVCAYAKQEK 278

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +E A  V  +M++  ++ PN +TY  +I  LCK+GR  +A+  FE+M+  + + P  + Y
Sbjct: 279 VEEAMLVFSKMRQQGLN-PNAVTYGAVIGILCKSGRVEDAMLYFEQMID-EGLSPGNIVY 336

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           N LI G C   K +RA++++  M + G   N   + ++++  CKEG++ E++++FD M  
Sbjct: 337 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 396

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             +KPD I Y+TLI+ +C AG++DEA +LL  M   G K D VT++ ++ G C+  ++++
Sbjct: 397 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKD 456

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
           AL +  ++   G+  +  +Y I+L    Q      A EL   +   G     +T N +L 
Sbjct: 457 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILH 516

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
            LCK  + +DA      L  M  K E+ ++ ++++ + + GR
Sbjct: 517 GLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 558



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 168/313 (53%), Gaps = 2/313 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-YPNLITYSTLIDGLCKNGRFREAI 258
           P+   +NIL+   C     + A E+L  M        P++++YST+I+G  K G   +  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
             + EM+ + +I P+ +TYN +I   C+   VD+A +++  M  +G  P+   Y ++++G
Sbjct: 109 STYNEMLDQ-RISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FC  G+ +EA     +M++  ++PD + Y +L++  C+ GR  EA ++   M +RG K +
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           I T+  +L G   +G + E  G+L+ +  +GI+ N   + I++    ++ ++E+A+ +  
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            M  +G  P+  T   ++  LCK+G  EDA +    +++ G  P +  +  L+  +C   
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 347

Query: 499 KLLFAFELLDELV 511
           K   A EL+ E++
Sbjct: 348 KWERAEELILEML 360



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 222/481 (46%), Gaps = 15/481 (3%)

Query: 34  KANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNH 93
           KA T   D  +E   T V +      +++ + +       +P+ A+ +F       G   
Sbjct: 135 KAQT--VDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI-VFLKKMRSDGVEP 191

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           +  TY +++D L +  +      +   MT    K     +  L++ ++       ++EM 
Sbjct: 192 DVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYAT---KGALVEMH 248

Query: 154 HKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
             +  + R    P+    S  +    +  +V+ A        Q   L PN   +  +I  
Sbjct: 249 GLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ-GLNPNAVTYGAVIGI 307

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
            CK G +E A    ++M    +S P  I Y++LI GLC   ++  A EL  EM+ +  I 
Sbjct: 308 LCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-IC 365

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
            + + +N +ID  C+ G+V  ++K+ + M   G  P++  Y+TL++G+C  GK+ EA ++
Sbjct: 366 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 425

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
              M +  +KPD + Y+TLIN +C+  R+ +AL L +EM+  G   DI+T+NIIL GL +
Sbjct: 426 LASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQ 485

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
             +   A  +   +   G  L  ++Y I+L+  C+    + A+ + + +          T
Sbjct: 486 TRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEART 545

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N ++  L K G  ++A          G  P   ++ L+ E I  G+ LL   E LD+L 
Sbjct: 546 FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII-GQGLL---EELDQLF 601

Query: 512 I 512
           +
Sbjct: 602 L 602



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 134/242 (55%), Gaps = 12/242 (4%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYT 313
           +A  +F+E++ +   +PD  +YN+L++G C   +   A +++  M ++G  C P+V +Y+
Sbjct: 35  DARHVFDELLRRG--IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           T++NGF KEG L +    ++EM +  + P+ + Y ++I   C+A  VD+A+E+L  M + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   D +T+N I+ G C  G+ +EA+  L+K+  DG+  +  +Y  ++++ C+ G   +A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWAL 489
            ++   M  RG  P   T   LL      G    A + + GL+++    G  P    +++
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPNHYVFSI 268

Query: 490 LV 491
           LV
Sbjct: 269 LV 270



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 206/458 (44%), Gaps = 44/458 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A +IF++++ ++G      TY T+L   A       +  +L  M       +  +F  L+
Sbjct: 212 ARKIFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 270

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             ++     E  + +F K+       P+       + +L +S +V+ A   + Y  Q + 
Sbjct: 271 CAYAKQEKVEEAMLVFSKMRQ-QGLNPNAVTYGAVIGILCKSGRVEDA---MLYFEQMID 326

Query: 198 --LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             L P   ++N LI   C     E A E++ EM    +   N I ++++ID  CK GR  
Sbjct: 327 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVI 385

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E+ +LF+ MV +  + PD +TY+ LIDG+C  GK+D A K++  M + G  P+   Y+TL
Sbjct: 386 ESEKLFDLMV-RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTL 444

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI------------------------ 351
           +NG+CK  ++++A  +F EM++  + PD I Y  ++                        
Sbjct: 445 INGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR 504

Query: 352 -----------NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
                      +  C+    D+AL + + +     K +  TFNI++  L + G+ +EA  
Sbjct: 505 QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 564

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +      +G+  N  +YR++      +G LE+  +L   M   G        N ++  L 
Sbjct: 565 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 624

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
           + G    A   L  + E  F  E+ + +L ++L+  G+
Sbjct: 625 QRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGK 662



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 204/439 (46%), Gaps = 5/439 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S+   I+    E +       +N + +Q+  + N  TY +I+  L + +  +    VL 
Sbjct: 89  VSYSTVINGFFKEGDLDKTYSTYNEMLDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLT 147

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES 179
            M           + +++  F +    +  +    K+     E P +   ++ ++ L ++
Sbjct: 148 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVE-PDVVTYNSLMDYLCKN 206

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            +   A+     S     LKP    +  L++ +  +G L     +L  M ++ + +PN  
Sbjct: 207 GRCTEARKIFD-SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI-HPNHY 264

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            +S L+    K  +  EA+ +F +M  +  + P+A+TY  +I   C+ G+V+ A    E 
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKM-RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 323

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M + G +P    Y +L++G C   K + A+E+  EM +  +  +TI + ++I+  C+ GR
Sbjct: 324 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 383

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           V E+ +L   M   G K DI+T++ ++ G C  GK++EA  +L  +   G+  +  +Y  
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++N  C+   ++ A+ L R M   G  P   T N +L  L +      A     G+ + G
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503

Query: 480 FKPESDSWALLVELICRGR 498
            + E  ++ +++  +C+ +
Sbjct: 504 RQLELSTYNIILHGLCKNK 522


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 227/483 (46%), Gaps = 57/483 (11%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT----- 122
           L+K +  P  +L  F   S+Q  F  N  ++  ++  L+R + ++   + L ++      
Sbjct: 67  LLKLKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKN 126

Query: 123 --------------YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKA 168
                         +E  KF   +F  ++K +    + +  L +F  +  +    PSL++
Sbjct: 127 NYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGC-VPSLRS 185

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
            +  L+ L+   +   A     + N+ L + P+    +I++  +CK G +  A + +KEM
Sbjct: 186 CNRLLSSLVRKGESSNAILVYDHINR-LGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEM 244

Query: 229 KKSQMSYPNLITYSTLIDG-----------------------------------LCKNGR 253
                   N++TY++LIDG                                    C+  +
Sbjct: 245 DYLGFEL-NVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCK 303

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             EA ++  EM   + ++ D   Y VLIDG+CR  K+D A ++ + M N G   N+F   
Sbjct: 304 LEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICN 363

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L+NG+CK G++ EA+ +   M ++ L+P++  Y+TL++ FCR G V +A+ +  EM   
Sbjct: 364 ALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRV 423

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G ++++VT N +L GLCR G  E+AL +   +   G+  ++ SY  +L+   + GE  +A
Sbjct: 424 GIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRA 483

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           + L   +L RG+       N ++   CK     +A      + E+GF+P+  ++  L++ 
Sbjct: 484 LALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDG 543

Query: 494 ICR 496
            C+
Sbjct: 544 YCK 546



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 198/400 (49%), Gaps = 21/400 (5%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           ++G   N  T   ++    R  K E  + VLR+M        EG+ L+   +      + 
Sbjct: 281 ERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERS-----EGMVLDEYAYGVLIDGYC 335

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLI---------ESNQVDLAQNFLKYSNQHLRL 198
           RV +M   +    R +  +  +   +NL I         ++ QV  A+  L        L
Sbjct: 336 RVCKMDDAV----RLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLL-MRMVDWDL 390

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +P +  ++ L+   C+ G +  A  V  EM +  +   N++T+++L+ GLC+ G F +A+
Sbjct: 391 EPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQ-SNVVTHNSLLKGLCRVGAFEDAL 449

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            ++  M+ K  + PD ++Y  L+D   + G+  RA  +   +   G   + + + T++NG
Sbjct: 450 HVWHLML-KRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMING 508

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           FCK  K+ EA+E F+ MK    +PD + Y TLI+ +C+ G V+EA ++ ++M++      
Sbjct: 509 FCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPS 568

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           I  +N ++GGL +  K  E + +L ++   G+  N  +Y  ++   C +G L+KA     
Sbjct: 569 IELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYF 628

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            M+ +GF P+    ++++  L + G  ++A + L  +V +
Sbjct: 629 DMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNL 668



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 136/277 (49%), Gaps = 35/277 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +  LI   C  G L+ AF    +M +   + PN+I  S ++  L + GR  EA
Sbjct: 600 LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFA-PNVIICSKIVSSLYRLGRIDEA 658

Query: 258 IELFEEMV----------------------------------SKDQILPDALTYNVLIDG 283
             L ++MV                                  SK   LP+++ YN+ I G
Sbjct: 659 NMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAG 718

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C+ GKVD AKKI   +   G +P+ F Y TL++G+   G + +A  + DEM    L P+
Sbjct: 719 LCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPN 778

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            I Y  LIN  C++G +D A +L  ++  +G   +++++NI++ G C+ G   EAL +  
Sbjct: 779 IITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRN 838

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           K+  +GI  +  +Y  ++   C++G++ KA  LL  M
Sbjct: 839 KMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM 875



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 184/396 (46%), Gaps = 9/396 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF-SNCSLHE- 147
           GF  N  TY +++D        E  + VL+ M       ++     L+K +   C L E 
Sbjct: 248 GFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEA 307

Query: 148 -RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
            +VL    +   +  ++    A    ++      ++D A   L+    ++ L+ N  I N
Sbjct: 308 EKVLREMERSEGMVLDE---YAYGVLIDGYCRVCKMDDAVR-LRDEMLNVGLRMNLFICN 363

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
            LI  +CK G +  A  +L  M    +  P   +YSTL+DG C+ G   +AI ++ EM+ 
Sbjct: 364 ALINGYCKNGQVSEAERLLMRMVDWDLE-PESYSYSTLMDGFCREGLVTKAISVYNEML- 421

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
           +  I  + +T+N L+ G CR G  + A  +   M   G  P+  +Y TL++   K G+  
Sbjct: 422 RVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFF 481

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
            A  +++++        T  + T+IN FC+  ++ EA E    MKE G + D VT+  ++
Sbjct: 482 RALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLI 541

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C+ G +EEA  + EK+  + I  +   Y  ++    +  +  + ++LL  M  +G  
Sbjct: 542 DGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLS 601

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           P+  T   L+   C  G  + A  A F ++E GF P
Sbjct: 602 PNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAP 637



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 192/455 (42%), Gaps = 73/455 (16%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ ++N +  + G   N  T+ ++L  L R   FE    V   M        E  +  L+
Sbjct: 413 AISVYNEML-RVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLL 471

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                     R L +++ I      + S  A +T +N   +  ++  A+       + L 
Sbjct: 472 DLLFKMGEFFRALALWNDILARGYGR-STYAFNTMINGFCKMEKMIEAEETFN-RMKELG 529

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK--------------------------- 230
            +P+   +  LI  +CK G +E AF+V ++M+K                           
Sbjct: 530 FEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVM 589

Query: 231 ---SQMSY----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
              S+M      PN++TY TLI G C  GR  +A   + +M+ K    P+ +  + ++  
Sbjct: 590 DLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEK-GFAPNVIICSKIVSS 648

Query: 284 FCRGGKVDRAKKIMEFMKN----------------NGCN-------------------PN 308
             R G++D A  +++ M N                +  N                   PN
Sbjct: 649 LYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPN 708

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
              Y   + G CK GK+ +AK++F  +      PD   Y TLI+ +  AG V++A  L  
Sbjct: 709 SVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRD 768

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EM +RG   +I+T+N ++ GLC+ G ++ A  + +KL   G+  N  SY I+++  C+ G
Sbjct: 769 EMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNG 828

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
              +A++L   ML  G  P   T + L+   CK G
Sbjct: 829 NTREALDLRNKMLKEGISPSLITYSALIYGFCKQG 863



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 162/313 (51%), Gaps = 1/313 (0%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           N     +LIK +C++  LE A +VL+EM++S+    +   Y  LIDG C+  +  +A+ L
Sbjct: 287 NKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRL 346

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            +EM++   +  +    N LI+G+C+ G+V  A++++  M +    P  ++Y+TLM+GFC
Sbjct: 347 RDEMLNV-GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFC 405

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           +EG + +A  V++EM    ++ + + + +L+   CR G  ++AL +   M +RG   D V
Sbjct: 406 REGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEV 465

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           ++  +L  L + G+   AL +   +   G   +  ++  ++N  C+  ++ +A E    M
Sbjct: 466 SYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRM 525

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              GF P   T   L+   CK G  E+A      + +    P  + +  L+  + + +K 
Sbjct: 526 KELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKT 585

Query: 501 LFAFELLDELVIK 513
               +LL E+ +K
Sbjct: 586 REVMDLLSEMCLK 598



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 160/347 (46%), Gaps = 39/347 (11%)

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +T  FN +I   CK   +  A E    MK+     P+ +TY TLIDG CK G   EA ++
Sbjct: 498 STYAFNTMINGFCKMEKMIEAEETFNRMKELGFE-PDGVTYRTLIDGYCKLGNVEEAFKV 556

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            E+M  K+ ILP    YN LI G  +  K      ++  M   G +PNV  Y TL+ G+C
Sbjct: 557 KEKM-EKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWC 615

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK--------- 371
            EG+L +A   + +M      P+ I  + +++   R GR+DEA  LL++M          
Sbjct: 616 DEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHG 675

Query: 372 --ERGCKAD------------------------IVTFNIILGGLCREGKIEEALGMLEKL 405
             +R  KAD                         V +NI + GLC+ GK+++A  +   L
Sbjct: 676 YFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSL 735

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G   +  +Y  +++     G +  A  L   ML RG  P+  T N L+  LCK+G  
Sbjct: 736 LLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNL 795

Query: 466 EDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            D A  LF  + + G  P   S+ +L++  C+      A +L ++++
Sbjct: 796 -DRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKML 841



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 16/266 (6%)

Query: 211 HHCKRGTLESA--FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           H    G L+S    + L E  KS  S PN + Y+  I GLCK+G+  +A ++F  ++ + 
Sbjct: 681 HKADDGNLDSQKIADTLDESSKS-FSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLR- 738

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              PD  TY  LI G+   G V+ A  + + M   G  PN+  Y  L+NG CK G L  A
Sbjct: 739 GFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRA 798

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           +++FD++    L P+ I Y  LI+ +C+ G   EAL+L  +M + G    ++T++ ++ G
Sbjct: 799 QKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYG 858

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML----CRG 444
            C++G + +A  +L+++       N A +  ++    + GE++K  +L  +M     C G
Sbjct: 859 FCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAG 918

Query: 445 FLPH-------YATSNELLVRLCKAG 463
            + H       ++ + E+L +LC  G
Sbjct: 919 VISHKQMELDVFSNAKEML-KLCVDG 943



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 171/392 (43%), Gaps = 72/392 (18%)

Query: 193 NQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           N+ LR  ++ N    N L+K  C+ G  E A  V   M K  ++ P+ ++Y TL+D L K
Sbjct: 418 NEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVT-PDEVSYCTLLDLLFK 476

Query: 251 NGRFREAIELF-------------------------EEMVSKDQIL---------PDALT 276
            G F  A+ L+                         E+M+  ++           PD +T
Sbjct: 477 MGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVT 536

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y  LIDG+C+ G V+ A K+ E M+     P++  Y +L+ G  K  K +E  ++  EM 
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMC 596

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              L P+ + Y TLI  +C  GR+D+A     +M E+G   +++  + I+  L R G+I+
Sbjct: 597 LKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRID 656

Query: 397 EALGMLEKLWYDGIYL-----------------------------------NKASYRIVL 421
           EA  +L+K+    ++L                                   N   Y I +
Sbjct: 657 EANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAI 716

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
              C+ G+++ A ++   +L RGF P   T   L+     AG   DA      +++ G  
Sbjct: 717 AGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLA 776

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P   ++  L+  +C+   L  A +L D+L +K
Sbjct: 777 PNIITYNALINGLCKSGNLDRAQKLFDKLHLK 808



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/363 (20%), Positives = 166/363 (45%), Gaps = 58/363 (15%)

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK--SQMSYPNLITYSTL 244
           +F K +++    +PN       +  HCK   + S   +  E +   +++  P+   YS+L
Sbjct: 79  HFFKLASKQSNFRPN-------VNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSL 131

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           +        + E + +FE+      +      +++++  +C  G +  A  + + M   G
Sbjct: 132 V-------VWNELVRVFEDFKFSPTV------FDMILKIYCEKGMIKNALHVFDNMGKLG 178

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C P++ +   L++   ++G+   A  V+D +    + PD    + ++N +C+ G V+ A+
Sbjct: 179 CVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAV 238

Query: 365 ELLKEMKERGCKADIVTFN-----------------------------------IILGGL 389
           + +KEM   G + ++VT+N                                   +++ G 
Sbjct: 239 DFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGY 298

Query: 390 CREGKIEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
           CR+ K+EEA  +L ++   +G+ L++ +Y ++++  C+  +++ A+ L   ML  G   +
Sbjct: 299 CRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMN 358

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
               N L+   CK G   +A   L  +V+   +PES S++ L++  CR   +  A  + +
Sbjct: 359 LFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYN 418

Query: 509 ELV 511
           E++
Sbjct: 419 EML 421


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 191/356 (53%), Gaps = 7/356 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           PS  +++  L+ L+++ Q  +  N FL       R  P+  ++   I+   K   +    
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFR--PSKFMYGKAIQAAVKLSDVGKGL 199

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+   MK  ++ YP++  Y+ LIDGLCK  R  +A +LF+EM+++ ++LP  +TYN LID
Sbjct: 200 ELFNRMKHDRI-YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR-RLLPSLITYNTLID 257

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G+C+ G  +++ K+ E MK +   P++  + TL+ G  K G +++A+ V  EMK+    P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D   ++ L + +    + + AL + +   + G K +  T +I+L  LC+EGKIE+A  +L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            +    G+  N+  Y  +++  C+KG+L  A   +  M  +G  P +   N L+ R C+ 
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
           G  E+A   +  +   G  P  +++ +L+    R  +    F++L E+  +++GT+
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM--EDNGTM 491



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 217/431 (50%), Gaps = 16/431 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAV---LRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           +G   ++ +   +LD L + K+F     V   + +  +   KF  G  +      S+   
Sbjct: 138 EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG- 196

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTC 203
             + LE+F+++    R  PS+   +  ++ L +  +++ A+      ++ L  RL P+  
Sbjct: 197 --KGLELFNRMKH-DRIYPSVFIYNVLIDGLCKGKRMNDAEQLF---DEMLARRLLPSLI 250

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
            +N LI  +CK G  E +F+V + MK   +  P+LIT++TL+ GL K G   +A  + +E
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIE-PSLITFNTLLKGLFKAGMVEDAENVLKE 309

Query: 264 MVSKD-QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           M  KD   +PDA T+++L DG+    K + A  + E   ++G   N +  + L+N  CKE
Sbjct: 310 M--KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           GK+++A+E+        L P+ + Y T+I+ +CR G +  A   ++ M+++G K D + +
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++   C  G++E A   + K+   G+  +  +Y I++    +K E +K  ++L+ M  
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G +P+  +   L+  LCK     +A I    + + G  P+   + +L++  C   K+  
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547

Query: 503 AFELLDELVIK 513
           AF    E++ K
Sbjct: 548 AFRFSKEMLKK 558



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 230/495 (46%), Gaps = 48/495 (9%)

Query: 57  SRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDA 116
           S+F+ +G AI       +    LE+FN +   + +  +   Y  ++D L + K+    + 
Sbjct: 178 SKFM-YGKAIQAAVKLSDVGKGLELFNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQ 235

Query: 117 VLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLL 176
           +  +M           +  L+  +      E+  ++  ++     E PSL   +T L  L
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE-PSLITFNTLLKGL 294

Query: 177 IESNQVDLAQNFLK--------------------YSNQH----------------LRLKP 200
            ++  V+ A+N LK                    YS+                  +++  
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354

Query: 201 NTCIFNILIKHHCKRGTLESAFEVL-KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            TC  +IL+   CK G +E A E+L +EM K  +  PN + Y+T+IDG C+ G    A  
Sbjct: 355 YTC--SILLNALCKEGKIEKAEEILGREMAKGLV--PNEVIYNTMIDGYCRKGDLVGARM 410

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
             E M  K  + PD L YN LI  FC  G+++ A+K +  MK  G +P+V  Y  L+ G+
Sbjct: 411 KIEAM-EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            ++ +  +  ++  EM++    P+ + Y TLINC C+  ++ EA  + ++M++RG    +
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
             +N+++ G C +GKIE+A    +++   GI LN  +Y  +++     G+L +A +LL  
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPESDSWALLVELICRGR 498
           +  +G  P   T N L+     AG  +   IAL+  +   G KP   ++ LL+ L C   
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQ-RCIALYEEMKRSGIKPTLKTYHLLISL-CTKE 647

Query: 499 KLLFAFELLDELVIK 513
            +     L  E+ +K
Sbjct: 648 GIELTERLFGEMSLK 662



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 189/388 (48%), Gaps = 10/388 (2%)

Query: 109 KKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNC-SLHERVLEMFHKIHPITREKPSLK 167
           +K   +  +L+Q   ET +   G+  +L++  S   +  + +   F    P  +   S  
Sbjct: 57  EKLRNLRVLLQQNRIETAR---GVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYL 113

Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            +S  LN   ES  +  A +   ++ ++  + P++    +L+ H  K         V   
Sbjct: 114 LLSVLLN---ESKMISEAADLF-FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           + +S    P+   Y   I    K     + +ELF  M   D+I P    YNVLIDG C+G
Sbjct: 170 ILESDFR-PSKFMYGKAIQAAVKLSDVGKGLELFNRM-KHDRIYPSVFIYNVLIDGLCKG 227

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            +++ A+++ + M      P++  Y TL++G+CK G  +++ +V + MK   ++P  I +
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            TL+    +AG V++A  +LKEMK+ G   D  TF+I+  G     K E ALG+ E    
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
            G+ +N  +  I+LN  C++G++EKA E+L   + +G +P+    N ++   C+ G    
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407

Query: 468 AAIALFGLVEMGFKPESDSWALLVELIC 495
           A + +  + + G KP+  ++  L+   C
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFC 435



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 161/309 (52%), Gaps = 7/309 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P++ +  T +N L + +++  AQ  +K   +   + P   I+N+LI   C +G +E AF 
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQ-IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
             KEM K  +   NL+TY+TLIDGL   G+  EA +L  E +S+  + PD  TYN LI G
Sbjct: 551 FSKEMLKKGIEL-NLVTYNTLIDGLSMTGKLSEAEDLLLE-ISRKGLKPDVFTYNSLISG 608

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +   G V R   + E MK +G  P +  Y  L++   KEG ++  + +F EM    LKPD
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS---LKPD 664

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y  +++C+   G +++A  L K+M E+    D  T+N ++ G  + GK+ E   +++
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLID 724

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++    +     +Y I++   C+  +   A    R M  +GFL      NEL+  L +  
Sbjct: 725 EMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEW 784

Query: 464 MAEDAAIAL 472
            +++A I +
Sbjct: 785 RSKEAEIVI 793


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 170/315 (53%), Gaps = 6/315 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  L+K  C    +E A  +L  + +      N++ ++T+I     +G+ +EA E
Sbjct: 275 PNAITYGFLLKGLCLASQVEEARTMLGRVPEL-----NVVLFNTVIGRCLLDGKLKEAAE 329

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L+E M SK    PDA TY++LI G C+ G++  A K++  M++ G  P++  YT L++ F
Sbjct: 330 LYETMGSKG-CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSF 388

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G     + + + M +  L  +  GY  +I   C+  R+D+A+  ++EMK +G K DI
Sbjct: 389 CRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDI 448

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N I+  LC   ++EEA  + E L ++G+  N  +Y  +++   + G  + AI L   
Sbjct: 449 CTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLAND 508

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M+  G      + N L+  LC+ G  + + + L  + E G KP + S+ LL+  +C+ R+
Sbjct: 509 MVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRR 568

Query: 500 LLFAFELLDELVIKE 514
           +  A EL  E++ +E
Sbjct: 569 VRDALELSKEMLNQE 583



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 165/312 (52%), Gaps = 2/312 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   ++ILI   CK G L SA ++L+EM+    + P+++TY+ L+   C+NG + + I 
Sbjct: 341 PDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFA-PSIVTYTILLHSFCRNGMW-DNIR 398

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
              E++S   +  +   YN +I   C+  ++D A + M+ MK+ G  P++  Y T++   
Sbjct: 399 AMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHL 458

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C   +++EA+ +F+ + +  +  + I Y TLI+   R G   +A+ L  +M   GC  DI
Sbjct: 459 CNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDI 518

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++N ++  LCR+G ++ ++ +L ++   GI  N  SY ++++  C+   +  A+EL + 
Sbjct: 519 VSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKE 578

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           ML +   P   T N L+  LCK G    A   L  L       +  ++ +L+   C+ R 
Sbjct: 579 MLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARL 638

Query: 500 LLFAFELLDELV 511
           L  A  LL+  V
Sbjct: 639 LHDASMLLNRAV 650



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 4/276 (1%)

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A  +L ++       P+  +Y+T++    +     + + L+  MV +D++ P   T+++ 
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIA 178

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
               CR G+ D A  ++  M  +GC P+   Y T+++  C +G + EA  + DEM     
Sbjct: 179 ARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGC 238

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
             D   +  +++  C  GR+ EA  L+  M  RGC  + +T+  +L GLC   ++EEA  
Sbjct: 239 SADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEART 298

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           ML ++      LN   +  V+      G+L++A EL   M  +G  P   T + L+  LC
Sbjct: 299 MLGRV----PELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLC 354

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           K G    A   L  + + GF P   ++ +L+   CR
Sbjct: 355 KLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCR 390



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 151/326 (46%), Gaps = 5/326 (1%)

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A + L        + P+   +N ++    +         + + M       P   T+S  
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIA 178

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
              LC+ GR  EA+ +   M ++   +PD + Y  +I   C  G V+ A  +++ M   G
Sbjct: 179 ARALCRLGRADEALTMLRSM-ARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMG 237

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
           C+ +V  +  +++G C  G+L+EA  + D M      P+ I Y  L+   C A +V+EA 
Sbjct: 238 CSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR 297

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            +L  + E     ++V FN ++G    +GK++EA  + E +   G   +  +Y I+++  
Sbjct: 298 TMLGRVPE----LNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGL 353

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G L  A++LLR M  +GF P   T   LL   C+ GM ++    L  + + G     
Sbjct: 354 CKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNL 413

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
           + +  ++  +C+ R++  A   + E+
Sbjct: 414 EGYNGMICAVCKDRRMDDAMRFMQEM 439



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 149/311 (47%), Gaps = 14/311 (4%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN-CSL 145
           E KGF  +  TY  +L    R   ++ + A+L  M+       +G+ +NL  +    C++
Sbjct: 370 EDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMS------DKGLSMNLEGYNGMICAV 423

Query: 146 --HERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN 201
               R+ +    +  +  +  KP +   +T +  L  +NQ++ A+ +L  +  H  +  N
Sbjct: 424 CKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAE-YLFENLLHEGVVAN 482

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N LI    + G+ + A  +  +M     S  ++++Y+ LI  LC++G    +I L 
Sbjct: 483 AITYNTLIHALLRNGSWQDAISLANDMVLHGCSL-DIVSYNGLIKALCRDGNVDRSIMLL 541

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
            EM  K  I P+ ++YN+LI   C+  +V  A ++ + M N    P++  Y TL+NG CK
Sbjct: 542 SEMAEKG-IKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCK 600

Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
            G +  A  + +++ N  +  D I Y  LI+  C+A  + +A  LL      G   +  T
Sbjct: 601 MGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERT 660

Query: 382 FNIILGGLCRE 392
           + I++    R+
Sbjct: 661 WGIMVQNFVRK 671



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 2/153 (1%)

Query: 363 ALELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWY-DGIYLNKASYRIV 420
           AL LL ++  R        ++N +L    R     + L +  ++ + D +     ++ I 
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIA 178

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
               C+ G  ++A+ +LR M   G +P       ++  LC  G   +AA  L  +  MG 
Sbjct: 179 ARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGC 238

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
             + +++  +V  +C   +L  A  L+D ++I+
Sbjct: 239 SADVNTFNDIVHGLCTLGRLREAARLVDRMMIR 271


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 211/418 (50%), Gaps = 9/418 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  +      +    ++++M    C+ +  I+  L+K F   S     + +  ++
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P +   ++ +  L ++ ++D A++FL    ++  LKPN   +   I  + +  
Sbjct: 479 KE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPNAFTYGAFISGYIEAS 536

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
              SA + +KEM++  +  PN +  + LI+  CK G+  EA   +  MV +  IL DA T
Sbjct: 537 EFASADKYVKEMRECGV-LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG-ILGDAKT 594

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y VL++G  +  KVD A++I   M+  G  P+VF+Y  L+NGF K G +Q+A  +FDEM 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              L P+ I Y  L+  FCR+G +++A ELL EM  +G   + VT+  I+ G C+ G + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  + +++   G+  +   Y  +++  C+  ++E+AI +      +G     A  N L+
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALI 773

Query: 457 VRLCKAGMAEDAAIALFGLVEMGF----KPESDSWALLVELICRGRKLLFAFELLDEL 510
             + K G  E     L  L++  F    KP   ++ ++++ +C+   L  A EL  ++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 206/426 (48%), Gaps = 8/426 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +N TY+ ++D L + +  +A   ++ +M          ++   +   S   + E+ 
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNIL 208
             +F  +   +   P  +A ++ +        V      L +   +++ + P T  +  +
Sbjct: 367 KALFDGMIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT--YGTV 423

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +K  C  G L+ A+ ++KEM  S    PN++ Y+TLI    +N RF +A+ + +EM  K+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCR-PNVVIYTTLIKTFLQNSRFGDAMRVLKEM--KE 480

Query: 269 Q-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           Q I PD   YN LI G  +  ++D A+  +  M  NG  PN F Y   ++G+ +  +   
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A +   EM+   + P+ +  T LIN +C+ G+V EA    + M ++G   D  T+ +++ 
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL +  K+++A  +  ++   GI  +  SY +++N   + G ++KA  +   M+  G  P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +    N LL   C++G  E A   L  +   G  P + ++  +++  C+   L  AF L 
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720

Query: 508 DELVIK 513
           DE+ +K
Sbjct: 721 DEMKLK 726



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 169/316 (53%), Gaps = 9/316 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           + +L+    K   ++ A E+ +EM+   ++ P++ +Y  LI+G  K G  ++A  +F+EM
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIA-PDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V ++ + P+ + YN+L+ GFCR G++++AK++++ M   G +PN   Y T+++G+CK G 
Sbjct: 654 V-EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA  +FDEMK   L PD+  YTTL++  CR   V+ A+ +    K +GC +    FN 
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNA 771

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIY-----LNKASYRIVLNFSCQKGELEKAIELLRL 439
           ++  + + GK E    +L +L  DG +      N  +Y I++++ C++G LE A EL   
Sbjct: 772 LINWVFKFGKTELKTEVLNRLM-DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M     +P   T   LL    K G   +        +  G +P+   +++++    +   
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 500 LLFAFELLDELVIKES 515
              A  L+D++  K +
Sbjct: 891 TTKALVLVDQMFAKNA 906



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 152/307 (49%), Gaps = 47/307 (15%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN  I+N+L+   C+ G +E A E+L EM    + +PN +TY T+IDG CK+G   EA
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL-HPNAVTYCTIIDGYCKSGDLAEA 716

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC------------ 305
             LF+EM  K  ++PD+  Y  L+DG CR   V+RA  I    K  GC            
Sbjct: 717 FRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALIN 774

Query: 306 ---------------------------NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
                                       PN   Y  +++  CKEG L+ AKE+F +M+N 
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            L P  I YT+L+N + + GR  E   +  E    G + D + +++I+    +EG   +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 399 LGMLEKLWY-----DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           L ++++++      DG  L+ ++ R +L+   + GE+E A +++  M+   ++P  AT  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 454 ELLVRLC 460
           EL+   C
Sbjct: 955 ELINESC 961



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 173/385 (44%), Gaps = 55/385 (14%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
            +G   +  TY  +++ L +  K +  + + R+M  +      F  G+ +N    FS   
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN---GFSKLG 641

Query: 145 LHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
             ++   +F ++    +T   P++   +  L     S +++ A+  L   +    L PN 
Sbjct: 642 NMQKASSIFDEMVEEGLT---PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPNA 697

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF- 261
             +  +I  +CK G L  AF +  EMK   +  P+   Y+TL+DG C+      AI +F 
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL-VPDSFVYTTLVDGCCRLNDVERAITIFG 756

Query: 262 -------------EEMVS----------KDQIL-------------PDALTYNVLIDGFC 285
                          +++          K ++L             P+ +TYN++ID  C
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + G ++ AK++   M+N    P V  YT+L+NG+ K G+  E   VFDE     ++PD I
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876

Query: 346 GYTTLINCFCRAGRVDEALELLKEM-----KERGCKADIVTFNIILGGLCREGKIEEALG 400
            Y+ +IN F + G   +AL L+ +M      + GCK  I T   +L G  + G++E A  
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSC 425
           ++E +       + A+   ++N SC
Sbjct: 937 VMENMVRLQYIPDSATVIELINESC 961



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 160/363 (44%), Gaps = 52/363 (14%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P L      L+ L+  N++DL  +  K   +   +  +   +++LI  HC+ G ++   +
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVER-NVVFDVKTYHMLIIAHCRAGNVQLGKD 242

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VL + +K         T +  +DG         A++L E M+ K  ++P   TY+VLIDG
Sbjct: 243 VLFKTEKE------FRTATLNVDG---------ALKLKESMICKG-LVPLKYTYDVLIDG 286

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF------------------------ 319
            C+  +++ AK ++  M + G + +   Y+ L++G                         
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346

Query: 320 -----------CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                       KEG +++AK +FD M    L P    Y +LI  +CR   V +  ELL 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EMK+R       T+  ++ G+C  G ++ A  +++++   G   N   Y  ++    Q  
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
               A+ +L+ M  +G  P     N L++ L KA   ++A   L  +VE G KP + ++ 
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 489 LLV 491
             +
Sbjct: 527 AFI 529



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 146/327 (44%), Gaps = 36/327 (11%)

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           ++ L  SN  + + P   +  +  K       L S F  +   K ++     L ++S L 
Sbjct: 48  RDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQ---KLDSFSFLA 104

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
             LC  G F +A+ + E M+ ++   P A  ++ ++          R  +  EF+   G 
Sbjct: 105 LDLCNFGSFEKALSVVERMIERNW--PVAEVWSSIV----------RCSQ--EFV---GK 147

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
           + +   +  L +G+  +G ++EA  VF       L P       L++   R  R+D   +
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI-VLNFS 424
           + K M ER    D+ T+++++   CR G ++        L  D ++  +  +R   LN  
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ--------LGKDVLFKTEKEFRTATLN-- 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
                ++ A++L   M+C+G +P   T + L+  LCK    EDA   L  +  +G   ++
Sbjct: 258 -----VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN 312

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
            +++LL++ + +GR    A  L+ E+V
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMV 339


>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
 gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
          Length = 491

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 203/390 (52%), Gaps = 10/390 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL+ FN +S    ++H+ ++Y   +D  AR +   ++ +++ +M           F  + 
Sbjct: 84  ALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIA 143

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
           + +++     R +++F  +H     +  L++ +T L++L +S +V++A N  K      R
Sbjct: 144 ERYASAGKPHRAVKVFLSMHQFGCFQ-DLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFR 202

Query: 198 LKPNTCI-FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
                C+ +N+++   C       A E+LKEM K  ++ PNL +Y+T++ G  + G+  E
Sbjct: 203 AD---CVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLT-PNLTSYNTMLKGYFRAGQINE 258

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A + F EM  +D  + D +TY  +I GF   G++ RA+K+ + M   G  P+V  Y   +
Sbjct: 259 AWDFFLEMKKRDCEI-DVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFI 317

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
              CK+  +  A  +F+EM      P++I Y  +I   C  G ++ A+E +  MK+ GC+
Sbjct: 318 QVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCE 377

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN--FSCQKG-ELEKA 433
            ++ T+N+++   C EG+I++AL + +K+       N  +Y I+++  F  +K  +L  A
Sbjct: 378 PNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVA 437

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAG 463
             LL  M+ RGF+P   T N +L  L   G
Sbjct: 438 GNLLIEMVDRGFVPRKFTFNRVLNGLLLTG 467



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 177/400 (44%), Gaps = 60/400 (15%)

Query: 112 EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIST 171
           + V+ +L+++  +  K  +  F NL+ H  + S H    +    I    R+ PSL++   
Sbjct: 68  QLVNTILKRLWNDGPKALQ--FFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRS--- 122

Query: 172 CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
                            L Y  +  RL P    F I+ + +   G    A +V   M + 
Sbjct: 123 -----------------LVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQF 165

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
              + +L +++T++D LCK+ R   A  LF+  V K +   D ++YNV++          
Sbjct: 166 G-CFQDLQSFNTILDVLCKSKRVEMAYNLFK--VFKGKFRADCVSYNVMV---------- 212

Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
                                    NG+C   +  +A E+  EM    L P+   Y T++
Sbjct: 213 -------------------------NGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTML 247

Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
             + RAG+++EA +   EMK+R C+ D++T+  ++ G    G+I+ A  + + +   G+ 
Sbjct: 248 KGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVL 307

Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
            + A+Y   +   C+K  ++ AI +   M+ +G++P+  T N ++  LC  G  E A   
Sbjct: 308 PSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEF 367

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  + + G +P   ++ L++   C   ++  A +L  ++ 
Sbjct: 368 MGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMT 407



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 134/315 (42%), Gaps = 40/315 (12%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P L+  +T++  L  +G   +A++ F  +           +Y+  ID   R       + 
Sbjct: 67  PQLV--NTILKRLWNDGP--KALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRS 122

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++  M++    P    +  +   +   GK   A +VF  M  F    D   + T+++  C
Sbjct: 123 LVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLC 182

Query: 356 RAGRV----------------------------------DEALELLKEMKERGCKADIVT 381
           ++ RV                                  ++ALE+LKEM +RG   ++ +
Sbjct: 183 KSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTS 242

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N +L G  R G+I EA     ++      ++  +Y  V++     GE+++A ++   M+
Sbjct: 243 YNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMV 302

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
            +G LP  AT N  +  LCK    ++A +    +V  G+ P S ++ L++  +C   ++ 
Sbjct: 303 KKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEME 362

Query: 502 FAFELLDELVIKESG 516
            A E +  +  K+ G
Sbjct: 363 RAMEFMGRM--KDDG 375



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 16/267 (5%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEG 131
           K    ALE+   +  ++G   N  +Y T+L    R  +  EA D  L +M    C+    
Sbjct: 219 KRTNKALEMLKEMV-KRGLTPNLTSYNTMLKGYFRAGQINEAWDFFL-EMKKRDCEIDVI 276

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            +  ++  F      +R  ++F  +       PS+   +  + +L + + VD A      
Sbjct: 277 TYTTVIHGFGVAGEIKRARKVFDTMVK-KGVLPSVATYNAFIQVLCKKDNVDNAIVIF-- 333

Query: 192 SNQHLRLK---PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
             + + +K   PN+  +N++I+  C RG +E A E +  MK      PN+ TY+ +I   
Sbjct: 334 --EEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCE-PNVQTYNLVIRYF 390

Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR---AKKIMEFMKNNGC 305
           C  G   +A++LF++M S D  LP+  TYN+LI       K D    A  ++  M + G 
Sbjct: 391 CDEGEIDKALDLFQKMTSGD-CLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGF 449

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVF 332
            P  F +  ++NG    G    AKE+ 
Sbjct: 450 VPRKFTFNRVLNGLLLTGNQGFAKEIL 476


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 208/438 (47%), Gaps = 42/438 (9%)

Query: 112 EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP--ITREKPSLKAI 169
           EA+  +LR+M+   C  +   +  L+K F + +  E  LE+ H +    +    P+L + 
Sbjct: 148 EAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSY 207

Query: 170 STCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
           +T +N      QVD A N FL  ++Q +   PN   + I+I   CK   ++ A  V ++M
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGI--PPNVVTYTIVIDGLCKAQVVDRAEGVFQQM 265

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
               +  PN++TY+ LI G    G+++E + + +EM S   + PD  TY +L+D  C+ G
Sbjct: 266 IDKGVR-PNIVTYTCLIHGYLSIGQWKEVVRMLKEM-SAHGLEPDCFTYGLLLDYLCKKG 323

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE--------------------- 327
           K   A+K+ + M   G  P+V  Y  +++G+  +G L E                     
Sbjct: 324 KCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN 383

Query: 328 --------------AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
                         A ++F++M+   L P+ + Y TLI+  C+ GRVD+A     +M   
Sbjct: 384 IVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE 443

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   +IV F  ++ GLC   K E+A  +  ++   GI+ N   +  ++   C +G + KA
Sbjct: 444 GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKA 503

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
             L+ LM   G  P   + N L+   C  G  ++A+  L  ++ +G KP   ++  L+  
Sbjct: 504 QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563

Query: 494 ICRGRKLLFAFELLDELV 511
            CR  ++  A+ +  E++
Sbjct: 564 YCRDGRIDDAYSVFQEML 581



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 3/338 (0%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L ++ +V  A   L      L   PN   +N L+K  C     E A E+L  M   Q+  
Sbjct: 140 LCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRS 199

Query: 236 --PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
             PNL++Y+T+I+G    G+  +A  LF +M  +  I P+ +TY ++IDG C+   VDRA
Sbjct: 200 CPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQG-IPPNVVTYTIVIDGLCKAQVVDRA 258

Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
           + + + M + G  PN+  YT L++G+   G+ +E   +  EM    L+PD   Y  L++ 
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318

Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
            C+ G+  EA +L   M  +G K D+  + IIL G   +G + E    L+ +  +GI  N
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPN 378

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
              + IV     +K  + +A+++   M  +G  P+      L+  LCK G  +DA +   
Sbjct: 379 HYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFN 438

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            ++  G  P    +  LV  +C   K   A EL  E+V
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMV 476



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 198/419 (47%), Gaps = 40/419 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A++IFN +  Q+G + N   YAT++D L +  + +  +    QM  E    +  +F +L+
Sbjct: 398 AMDIFNKM-RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLV 456

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                    E+  E+F ++                                    NQ + 
Sbjct: 457 YGLCTIDKWEKAGELFFEM-----------------------------------VNQGIH 481

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             PN   FN ++ + C  G +  A  ++  M++   + P++I+Y+ LI G C  G+  EA
Sbjct: 482 --PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVG-TRPDIISYNALIRGHCLVGKTDEA 538

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L + M+S   + P+  TYN L+ G+CR G++D A  + + M +NG  P V  Y T+++
Sbjct: 539 SKLLDIMLSVG-LKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILH 597

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  K  +  EAKE++  M     +     Y  ++N   +   VDEAL++ + +  +  + 
Sbjct: 598 GLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQV 657

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI+TFNI++G L ++G+ E+A+ +   +  +G+  +  +YR++     ++G LE+   + 
Sbjct: 658 DIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMF 717

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             M   G  P+    N L+ RL   G    A   L  + E  F  E+ + ++L+ L  R
Sbjct: 718 SEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSR 776



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 230/527 (43%), Gaps = 78/527 (14%)

Query: 39  KADPPVETSDTCVDARKRS---RFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNN 95
           +A+  +E      D + RS     +S+   I+    E +   A  +F  +++Q G   N 
Sbjct: 181 RAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQ-GIPPNV 239

Query: 96  ATYATILDKLARYKKFEAVDAVLRQM----------TYETCKFHEGI-------FLNLMK 138
            TY  ++D L + +  +  + V +QM          TY TC  H  +        + ++K
Sbjct: 240 VTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTY-TCLIHGYLSIGQWKEVVRMLK 298

Query: 139 HFS------NCSLHERVLEMFHKIHPITRE------------KPSLKAISTCLNLLIESN 180
             S      +C  +  +L+   K    T              KP +      L+      
Sbjct: 299 EMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKG 358

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
            +    +FL     +  + PN  IFNI+     K+  +  A ++  +M++  +S PN++ 
Sbjct: 359 ALSEMHSFLDLMVGN-GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLS-PNVVN 416

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+TLID LCK GR  +A   F +M++ + + P+ + +  L+ G C   K ++A ++   M
Sbjct: 417 YATLIDALCKLGRVDDAELKFNQMIN-EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEM 475

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
            N G +PNV  + T+M   C EG++ +A+ + D M+    +PD I Y  LI   C  G+ 
Sbjct: 476 VNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKT 535

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI---------- 410
           DEA +LL  M   G K +  T+N +L G CR+G+I++A  + +++  +GI          
Sbjct: 536 DEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595

Query: 411 ----------------YLNKA---------SYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
                           YLN           +Y I+LN   +   +++A+++ + +  +  
Sbjct: 596 LHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDL 655

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
                T N ++  L K G  EDA      +   G  P+  ++ L+ E
Sbjct: 656 QVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAE 702



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 201/416 (48%), Gaps = 15/416 (3%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG   + + Y  IL   A       + + L  M       +  IF  +   F+  ++  
Sbjct: 337 RKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIG 396

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIF 205
             +++F+K+       P++   +T ++ L +  +VD A+  LK+ NQ +   + PN  +F
Sbjct: 397 EAMDIFNKMRQ-QGLSPNVVNYATLIDALCKLGRVDDAE--LKF-NQMINEGVAPNIVVF 452

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA---IELFE 262
             L+   C     E A E+  EM  +Q  +PN++ ++T++  LC  GR  +A   I+L E
Sbjct: 453 TSLVYGLCTIDKWEKAGELFFEMV-NQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLME 511

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            + ++    PD ++YN LI G C  GK D A K+++ M + G  PN   Y TL++G+C++
Sbjct: 512 RVGTR----PDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRD 567

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G++ +A  VF EM +  + P  + Y T+++   +  R  EA EL   M   G +  I T+
Sbjct: 568 GRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTY 627

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           NIIL GL +   ++EAL M + L    + ++  ++ I++    + G  E A+ L   +  
Sbjct: 628 NIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISA 687

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV-ELICRG 497
            G +P   T   +   L + G  E+       + + G  P S     LV  L+ RG
Sbjct: 688 NGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRG 743



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 159/341 (46%), Gaps = 39/341 (11%)

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           ++ P+   ++IL+   C+ G LE  F     + K+     +++  + L+ GLC   R  E
Sbjct: 89  KVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGE 148

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYT 313
           A+ +    +S+    P+ ++YN L+ GFC   + + A +++  M +     C PN+ +Y 
Sbjct: 149 AMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYN 208

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD------------ 361
           T++NGF  EG++ +A  +F +M +  + P+ + YT +I+  C+A  VD            
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268

Query: 362 -----------------------EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
                                  E + +LKEM   G + D  T+ ++L  LC++GK  EA
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
             + + +   GI  + + Y I+L+    KG L +    L LM+  G  P++   N +   
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCA 388

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR-GR 498
             K  M  +A      + + G  P   ++A L++ +C+ GR
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 7/264 (2%)

Query: 257 AIELFEEMVSK--DQILPDALTYNVLIDGFCRGGKVDRAKKIMEF-MKNNGCNPNVFNYT 313
            +  F  M+     ++ PD  TY++L+  FCR G+++         +K      +V    
Sbjct: 75  VVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVN 134

Query: 314 TLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            L+ G C   ++ EA  V    M      P+ + Y TL+  FC   R +EALELL  M +
Sbjct: 135 RLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMAD 194

Query: 373 ---RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
              R C  ++V++N ++ G   EG++++A  +   +   GI  N  +Y IV++  C+   
Sbjct: 195 GQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQV 254

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +++A  + + M+ +G  P+  T   L+      G  ++    L  +   G +P+  ++ L
Sbjct: 255 VDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGL 314

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
           L++ +C+  K   A +L D ++ K
Sbjct: 315 LLDYLCKKGKCTEARKLFDSMIRK 338


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 167/311 (53%), Gaps = 2/311 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N L+   C RG +  A  +L  M     + P+++TY+ L++  CK   +R+A+E
Sbjct: 150 PSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCA-PDVVTYNILLEAACKGRGYRQAME 208

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L + ++  +   P  +TYNV++DG CR G VD A++++  + + GC PN  NY T++ G 
Sbjct: 209 LID-LMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGL 267

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
              G+ ++ +E+  EM +    P     + +I+  C+ G    A+ LL++M +  C A+I
Sbjct: 268 RTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANI 327

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT+N ++ GLC +G ++ AL +L  +  DG   N  +Y I++   C     E A +L+  
Sbjct: 328 VTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAK 387

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M     LP   T N ++  LC+ G+   A      + E G  P S +++ ++E + +  K
Sbjct: 388 MSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGK 447

Query: 500 LLFAFELLDEL 510
           +  + ELL+E+
Sbjct: 448 MEQSLELLNEM 458



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 180/362 (49%), Gaps = 13/362 (3%)

Query: 89  KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCS---- 144
           +G    N TY  I+D + R    +    +L  +    C  +   +  ++K          
Sbjct: 216 EGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWED 275

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           + E + EMF +  P     PS   +S  ++ L +      A   L+  ++H     N   
Sbjct: 276 VEELIAEMFSENCP-----PSEATLSVVISSLCQEGLFQRAIRLLEKMSKH-DCTANIVT 329

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N ++   C++G ++ A  +L  M+ +    PN+ TY+ L+ GLC   R+ +A +L  +M
Sbjct: 330 YNAVVSGLCEQGHVDGALYLLSNMQ-TDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKM 388

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            S+   LPD LT+N +I   C+ G   +A ++ + M   GC PN   Y++++ G  K GK
Sbjct: 389 -SQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGK 447

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++++ E+ +EM +    P+ I Y  L  C     ++ EA++++ ++++ G     V +N 
Sbjct: 448 MEQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNT 506

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           IL GLCR GK ++A+ +L  +  DG   ++++Y I++     +G +++A ELL  +  R 
Sbjct: 507 ILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRD 566

Query: 445 FL 446
            +
Sbjct: 567 VI 568



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 16/349 (4%)

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L+ L+   ++D A   ++ S       P+  + N L++  C+RG    A  V++    + 
Sbjct: 63  LSSLVHRGELDAALRVVESS----LCPPDVALANRLVRDLCRRGRPADAARVVEACGSAA 118

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            +    +TYS L DG C+ GR  EA  + + M     +LP A  YN L+   C  G+V  
Sbjct: 119 TA----VTYSALADGYCRVGRLDEARRVVDGM----PVLPSAYAYNPLMHALCVRGQVRD 170

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A  +++ M   GC P+V  Y  L+   CK    ++A E+ D M+     P  + Y  +++
Sbjct: 171 ALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMD 230

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             CR G VD A ELL  +   GC  + V +N +L GL   G+ E+   ++ +++ +    
Sbjct: 231 GMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPP 290

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           ++A+  +V++  CQ+G  ++AI LL  M       +  T N ++  LC+ G  + A   L
Sbjct: 291 SEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLL 350

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
             +   G KP   ++ +LV+ +C   +    +E  ++L+ K S T  +P
Sbjct: 351 SNMQTDGCKPNIFTYNILVKGLCNAER----WEDAEDLMAKMSQTDCLP 395



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 174/330 (52%), Gaps = 10/330 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ N++    G   N   Y T+L  L    ++E V+ ++ +M  E C   E     ++
Sbjct: 241 ARELLNSLPSY-GCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVI 299

Query: 138 KHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
                  L +R + +  K+  H  T    +  A+   ++ L E   VD A  +L  + Q 
Sbjct: 300 SSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAV---VSGLCEQGHVDGAL-YLLSNMQT 355

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              KPN   +NIL+K  C     E A +++ +M ++    P+++T++T+I  LC+ G   
Sbjct: 356 DGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTD-CLPDILTFNTIIGFLCQKGLTM 414

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A+E+F++M  K    P+++TY+ +I+G  + GK++++ +++  M + G NP + NY  L
Sbjct: 415 QAVEVFKQMPEKG-CCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLL 472

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
                +E KL EA ++  ++++  + P  + Y T++   CR G+ D+A+++L  M   GC
Sbjct: 473 AECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGC 532

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKL 405
             D  T++I++ GL  EG ++EA  +L  L
Sbjct: 533 MPDESTYSILIQGLAHEGYMKEARELLSTL 562


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 189/391 (48%), Gaps = 11/391 (2%)

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDL 184
           +F   +FL        C   +     F  + P    K SL  IS  T +  L +S ++D 
Sbjct: 71  RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTP----KASLDVISYTTVIKGLADSKRIDE 126

Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
           A    +   +     PN   +  +I    K G +E   +  +EM  S    P   TY+ +
Sbjct: 127 ACELFE-ELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS-CVPTRTTYTVV 184

Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           IDGLCK     +A ++FE+MV K  + PD +TY  LIDGF +  K+D A+K+++ M   G
Sbjct: 185 IDGLCKAQMLPDACKVFEQMVQKGCV-PDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 243

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
             P    Y ++++GFCK   + EAKEV  +M+    +P    +T+L++ +   GR +EA 
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY-RIVLNF 423
           ++L EM  RGC  D++ +  ++  L   G++ EA  + + +   G   +  +Y  I+ NF
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           S + G +E A E+L LM   G  P     N L+    K    + A      +V  G KP 
Sbjct: 364 S-KIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKE 514
           + ++ +L+  + +  K   AF L  E++ KE
Sbjct: 423 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKE 453



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/454 (22%), Positives = 208/454 (45%), Gaps = 8/454 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           IS+   I  +   K    A E+F  + +  G + N   Y  ++D L +  + E       
Sbjct: 109 ISYTTVIKGLADSKRIDEACELFEEL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIE 178
           +M+  +C      +  ++       +     ++F ++  + +   P     +T ++   +
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM--VQKGCVPDTITYTTLIDGFSK 225

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           ++++D A+  L         +P    +  ++   CK   +  A EV+ +M++     P L
Sbjct: 226 ASKMDEARKLLDVMLTK-GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE-PGL 283

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
             +++L+      GR  EA ++  EM ++    PD + Y  LID     G+V  A+ + +
Sbjct: 284 FIFTSLLSYYLSKGRAEEAYQVLTEMTARG-CAPDVILYTSLIDLLFSTGRVPEARHVFD 342

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M   GC P+   Y T++  F K G ++ A E+ + M    + PD   Y +L++ + +  
Sbjct: 343 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 402

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML-EKLWYDGIYLNKASY 417
           RVD+A  +   M   G K + VTFN+++ GL ++GK + A  +  E L  + +     SY
Sbjct: 403 RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSY 462

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I+++   + G + +A    + M+ RG +P   T   L+  L KAG   +A   +  +V+
Sbjct: 463 TILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 522

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +G  P+  +++ L+  +     +  A+++  E++
Sbjct: 523 LGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM 556



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 211/487 (43%), Gaps = 43/487 (8%)

Query: 19  TSSSSLPWISPLEVIK--ANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQ 76
           T  +SL  IS   VIK  A++ + D   E  +    A      +++ A I  +      +
Sbjct: 101 TPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIE 160

Query: 77  CALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL 136
             L+ F  +S          TY  ++D L + +       V  QM  + C      +  L
Sbjct: 161 DGLKNFEEMSGSSCVP-TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTL 219

Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
           +  FS  S  +   ++   +      +P+     + ++   + + ++ A+  +    +  
Sbjct: 220 IDGFSKASKMDEARKLLD-VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER- 277

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
             +P   IF  L+ ++  +G  E A++VL EM  ++   P++I Y++LID L   GR  E
Sbjct: 278 GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT-ARGCAPDVILYTSLIDLLFSTGRVPE 336

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  +F+ M+ K    PDALTY  +I  F + G V+ A +I+E M  +G  P+ F Y +LM
Sbjct: 337 ARHVFDSMIEKG-CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 395

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTI------------------------------- 345
           +G+ K  ++ +A  V+D M    +KP+ +                               
Sbjct: 396 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEV 455

Query: 346 -----GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
                 YT LI+   +AGRV EA    +EM +RG   +  T+  ++  L + G+I EA  
Sbjct: 456 PPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK 515

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           ++E +   G+  +  +Y  ++        ++ A ++ + M+ RG  P+  T   L     
Sbjct: 516 LVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFR 575

Query: 461 KAGMAED 467
            AG A D
Sbjct: 576 AAGRALD 582



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 126/258 (48%), Gaps = 35/258 (13%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P  ++YN +I G     K+D A K    M +NGC P+V  +TTL++GFCK G+ Q   ++
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 332 FDE-MKNFLLKPDTIGYTTLINCFCRAG-------------------------------- 358
            ++ +K F  +PD   YT++I+ +C+AG                                
Sbjct: 65  LNQALKRF--RPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSK 122

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           R+DEA EL +E+K  GC  ++V +  ++ GL + G+IE+ L   E++        + +Y 
Sbjct: 123 RIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYT 182

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
           +V++  C+   L  A ++   M+ +G +P   T   L+    KA   ++A   L  ++  
Sbjct: 183 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242

Query: 479 GFKPESDSWALLVELICR 496
           G +P + ++  +V   C+
Sbjct: 243 GPEPTAVTYGSIVHGFCK 260



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 51/301 (16%)

Query: 78  ALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           A E +  ++E   +G   +   Y +++D L    +      V   M  + C      +  
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 358

Query: 136 LMKHFS---NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
           ++++FS   N      +LE+  K    +   P   A ++ ++  ++  +VD  Q F  Y 
Sbjct: 359 IIQNFSKIGNVEAAGEILELMAK----SGVGPDCFAYNSLMDGYVKLERVD--QAFGVYD 412

Query: 193 NQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                 +KPN   FN+L+    K G  + AF + KEM + +   P L++Y+ LIDGL K 
Sbjct: 413 RMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKA 472

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM----------- 300
           GR  EA   F+EM+ +  I+P+  TY  LI    + G++  AKK++E M           
Sbjct: 473 GRVSEAFLQFQEMIDRG-IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQA 531

Query: 301 ------------------------KNNGCNPNVFNYTTLMNGFCKEGK---LQEAKEVFD 333
                                      GC PN   Y  L  GF   G+   L+  K+ F 
Sbjct: 532 YSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFS 591

Query: 334 E 334
           +
Sbjct: 592 Q 592


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 182/353 (51%), Gaps = 2/353 (0%)

Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
           T  K    A +T L  L  + + D A   L      L   P+   + I++K  C     +
Sbjct: 37  TGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQ 96

Query: 220 SAFEVLKEMKKSQ-MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
            A ++L+ M K + +  P+++TY+T+I G  K G+  +A  L+ EM+ +   +PD +T+N
Sbjct: 97  QALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQG-FVPDVVTHN 155

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
            +I+  C+   VD A+ ++  M +NG  PN   YT++++G+   G+ +EA ++F EM   
Sbjct: 156 SIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGR 215

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            L PD + + + ++  C+ GR  EA E+   M  +G + +IVT+ I+L G   EG   + 
Sbjct: 216 GLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADM 275

Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
           +     +  DGI  N   + I+++   ++G +++A+ +L  M  +G  P   T + L+  
Sbjct: 276 MSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISA 335

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           LC+ G   DA      ++  G +P +  +  L++  C    L+ A EL+ E++
Sbjct: 336 LCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMM 388



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 215/475 (45%), Gaps = 75/475 (15%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q+GF  +  T+ +I++ L + +  +  + +LRQM       ++  + +++  +S     E
Sbjct: 144 QQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWE 203

Query: 148 RVLEMFHKI---------------------HPITRE-------------KPSLKAISTCL 173
              +MF ++                     H  ++E             +P++      L
Sbjct: 204 EATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILL 263

Query: 174 N-LLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           +    E    D+   F       +    N  +F ILI  + KRG ++ A  +L EM+   
Sbjct: 264 HGYATEGCFADMMSFFNTMKGDGI--VANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +S P++ TYSTLI  LC+ GR  +A++ F +M+    + P+ + Y+ LI GFC  G + +
Sbjct: 322 LS-PDVFTYSTLISALCRMGRLADAVDKFNQMIGTG-VQPNTVVYHSLIQGFCTHGDLVK 379

Query: 293 AKKIMEFMKNNGC-NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL------------ 339
           AK+++  M NNG   PN+  + ++++  CKEG++ +A  +FD +K+              
Sbjct: 380 AKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLI 439

Query: 340 -----------------------LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
                                  + PDT  Y TL+N + ++GR+D+ L L +EM ++  K
Sbjct: 440 DGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIK 499

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
              VT+NIIL GL R G+   A  ML ++   G  ++  +Y I+L   C+    ++AI +
Sbjct: 500 PTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVM 559

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            + +       +  T N ++  +      E+A      + + G  P + ++ +++
Sbjct: 560 FQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMI 614



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 222/446 (49%), Gaps = 15/446 (3%)

Query: 73  KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE-AVDAVLRQMTYETCKFHEG 131
           + P+  L  F  +  + G   +     T+L  L   K+ + AV  +LR+MT   C     
Sbjct: 22  RRPELGLAFFGRLL-RTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAF 80

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREK----PSLKAISTCLNLLIESNQVDLAQN 187
            +  ++K   + +  ++ L++   +  + +E+    P +   +T ++   +  ++  A N
Sbjct: 81  SYAIVLKRLCDDNRSQQALDL---LRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACN 137

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            L +        P+    N +I   CK   +++A  +L++M  + +  PN +TY+++I G
Sbjct: 138 -LYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVP-PNKVTYTSMIHG 195

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
               GR+ EA ++F EM  +  ++PD +++N  +D  C+ G+   A +I   M   G  P
Sbjct: 196 YSTLGRWEEATKMFREMTGRG-LIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRP 254

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           N+  Y  L++G+  EG   +    F+ MK   +  + + +T LI+ + + G +DEA+ +L
Sbjct: 255 NIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLIL 314

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EM+ +G   D+ T++ ++  LCR G++ +A+    ++   G+  N   Y  ++   C  
Sbjct: 315 SEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTH 374

Query: 428 GELEKAIELLRLMLCRGF-LPHYATSNELLVRLCKAGMAEDAAIALFGLV-EMGFKPESD 485
           G+L KA EL+  M+  G   P+ A  N ++  +CK G   DA   +F LV ++G + +  
Sbjct: 375 GDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAH-HIFDLVKDIGERSDII 433

Query: 486 SWALLVELICRGRKLLFAFELLDELV 511
            +  L++  C   ++  AF +LD ++
Sbjct: 434 MFNTLIDGYCLVGEMGKAFSVLDAMI 459



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 196/393 (49%), Gaps = 8/393 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A EIF +++  KG   N  TY  +L   A    F  + +    M  +    +  +F  L+
Sbjct: 240 AAEIFYSMA-AKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             ++   + +  + +  ++       P +   ST ++ L    +  LA    K+ NQ + 
Sbjct: 299 DAYAKRGMMDEAMLILSEMQG-QGLSPDVFTYSTLISALCRMGR--LADAVDKF-NQMIG 354

Query: 198 --LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
             ++PNT +++ LI+  C  G L  A E++ EM  + +  PN+  +++++  +CK GR  
Sbjct: 355 TGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVM 414

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  +F+ +V       D + +N LIDG+C  G++ +A  +++ M + G  P+ F Y TL
Sbjct: 415 DAHHIFD-LVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL 473

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+ K G++ +   +F EM +  +KP T+ Y  +++   RAGR   A ++L EM   G 
Sbjct: 474 VNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT 533

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
              + T+NIIL GLCR    +EA+ M +KL    +  N  +   ++N        E+A +
Sbjct: 534 TVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKD 593

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           L   +   G +P+ +T   ++  L K G  E+A
Sbjct: 594 LFSAISDSGLVPNASTYGIMIRNLLKEGSVEEA 626



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/478 (23%), Positives = 225/478 (47%), Gaps = 40/478 (8%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE--TCKF 128
           C K    A+++      + G   +  +YA +L +L    + +    +LR M  E   C  
Sbjct: 55  CTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSP 114

Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
               +  ++  F       +   ++H++       P +   ++ +N L ++  VD A+  
Sbjct: 115 DVVTYNTVIHGFFKEGKIGKACNLYHEMMQ-QGFVPDVVTHNSIINALCKARAVDNAELL 173

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
           L+    +  + PN   +  +I  +   G  E A ++ +EM    +  P+++++++ +D L
Sbjct: 174 LRQMVDN-GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGL-IPDIVSWNSFMDSL 231

Query: 249 CKNGRFREAIELFEEMVSK----------------------------------DQILPDA 274
           CK+GR +EA E+F  M +K                                  D I+ + 
Sbjct: 232 CKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANC 291

Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
           L + +LID + + G +D A  I+  M+  G +P+VF Y+TL++  C+ G+L +A + F++
Sbjct: 292 LVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQ 351

Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC-KADIVTFNIILGGLCREG 393
           M    ++P+T+ Y +LI  FC  G + +A EL+ EM   G  + +I  FN I+  +C+EG
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++ +A  + + +   G   +   +  +++  C  GE+ KA  +L  M+  G  P   T N
Sbjct: 412 RVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            L+    K+G  +D       + +   KP + ++ ++++ + R  + + A ++L E++
Sbjct: 472 TLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 134/264 (50%), Gaps = 4/264 (1%)

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
           +++ P + TY  +++G C+  R    +  F  ++ +  +  D    N ++   C   + D
Sbjct: 2   RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLL-RTGLKADKTAANTVLKCLCCTKRTD 60

Query: 292 RAKKI-MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM--KNFLLKPDTIGYT 348
            A K+ +  M   GC P+ F+Y  ++   C + + Q+A ++   M  +  +  PD + Y 
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           T+I+ F + G++ +A  L  EM ++G   D+VT N I+  LC+   ++ A  +L ++  +
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G+  NK +Y  +++     G  E+A ++ R M  RG +P   + N  +  LCK G +++A
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEA 240

Query: 469 AIALFGLVEMGFKPESDSWALLVE 492
           A   + +   G +P   ++ +L+ 
Sbjct: 241 AEIFYSMAAKGHRPNIVTYGILLH 264



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 174/390 (44%), Gaps = 46/390 (11%)

Query: 87  EQKGFNHNNATYATILDKLARYKKF-EAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSL 145
           + +G + +  TY+T++  L R  +  +AVD    QM     + +  ++ +L++ F     
Sbjct: 318 QGQGLSPDVFTYSTLISALCRMGRLADAVDK-FNQMIGTGVQPNTVVYHSLIQGFCTHGD 376

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
             +  E+ +++      +P++   ++ ++ + +  +V  A +      + +  + +  +F
Sbjct: 377 LVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLV-KDIGERSDIIMF 435

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N LI  +C  G +  AF VL  M  + +  P+  TY+TL++G  K+GR  + + LF EM 
Sbjct: 436 NTLIDGYCLVGEMGKAFSVLDAMISAGIG-PDTFTYNTLVNGYFKSGRIDDGLNLFREMS 494

Query: 266 SKD--------QILPDAL--------------------------TYNVLIDGFCRGGKVD 291
            K          I+ D L                          TYN+++ G CR    D
Sbjct: 495 DKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTD 554

Query: 292 RAKKIMEFMKNNGCNPNV-FNYTTL---MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            A  I+ F K   C  NV FN TTL   +N      + +EAK++F  + +  L P+   Y
Sbjct: 555 EA--IVMFQKL--CTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTY 610

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
             +I    + G V+EA  +   M++ GC       N  +  L  +G+I +A   + K+  
Sbjct: 611 GIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDG 670

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELL 437
             I L  ++  ++L+    KG   + I+LL
Sbjct: 671 KSISLEASTSSLLLSLFSGKGNYREQIQLL 700



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 3/245 (1%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA-KE 330
           P   TY V+++G CR  + +        +   G   +     T++   C   +  +A K 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERG-CKADIVTFNIILGG 388
           +   M      PD   Y  ++   C   R  +AL+LL+ M KE G C  D+VT+N ++ G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
             +EGKI +A  +  ++   G   +  ++  ++N  C+   ++ A  LLR M+  G  P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
             T   ++      G  E+A      +   G  P+  SW   ++ +C+  +   A E+  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 509 ELVIK 513
            +  K
Sbjct: 246 SMAAK 250


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 211/418 (50%), Gaps = 9/418 (2%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
           TY T++  +      +    ++++M    C+ +  I+  L+K F   S     + +  ++
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
                  P +   ++ +  L ++ ++D A++FL    ++  LKPN   +   I  + +  
Sbjct: 479 KE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPNAFTYGAFISGYIEAS 536

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
              SA + +KEM++  +  PN +  + LI+  CK G+  EA   +  MV +  IL DA T
Sbjct: 537 EFASADKYVKEMRECGV-LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG-ILGDAKT 594

Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           Y VL++G  +  KVD A++I   M+  G  P+VF+Y  L+NGF K G +Q+A  +FDEM 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              L P+ I Y  L+  FCR+G +++A ELL EM  +G   + VT+  I+ G C+ G + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           EA  + +++   G+  +   Y  +++  C+  ++E+AI +      +G     A  N L+
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALI 773

Query: 457 VRLCKAGMAEDAAIALFGLVEMGF----KPESDSWALLVELICRGRKLLFAFELLDEL 510
             + K G  E     L  L++  F    KP   ++ ++++ +C+   L  A EL  ++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 206/426 (48%), Gaps = 8/426 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +N TY+ ++D L + +  +A   ++ +M          ++   +   S   + E+ 
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHLRLKPNTCIFNIL 208
             +F  +   +   P  +A ++ +        V      L +   +++ + P T  +  +
Sbjct: 367 KALFDGMIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT--YGTV 423

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +K  C  G L+ A+ ++KEM  S    PN++ Y+TLI    +N RF +A+ + +EM  K+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCR-PNVVIYTTLIKTFLQNSRFGDAMRVLKEM--KE 480

Query: 269 Q-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
           Q I PD   YN LI G  +  ++D A+  +  M  NG  PN F Y   ++G+ +  +   
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A +   EM+   + P+ +  T LIN +C+ G+V EA    + M ++G   D  T+ +++ 
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL +  K+++A  +  ++   GI  +  SY +++N   + G ++KA  +   M+  G  P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           +    N LL   C++G  E A   L  +   G  P + ++  +++  C+   L  AF L 
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720

Query: 508 DELVIK 513
           DE+ +K
Sbjct: 721 DEMKLK 726



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 169/316 (53%), Gaps = 9/316 (2%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           + +L+    K   ++ A E+ +EM+   ++ P++ +Y  LI+G  K G  ++A  +F+EM
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIA-PDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           V ++ + P+ + YN+L+ GFCR G++++AK++++ M   G +PN   Y T+++G+CK G 
Sbjct: 654 V-EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           L EA  +FDEMK   L PD+  YTTL++  CR   V+ A+ +    K +GC +    FN 
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNA 771

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIY-----LNKASYRIVLNFSCQKGELEKAIELLRL 439
           ++  + + GK E    +L +L  DG +      N  +Y I++++ C++G LE A EL   
Sbjct: 772 LINWVFKFGKTELKTEVLNRLM-DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
           M     +P   T   LL    K G   +        +  G +P+   +++++    +   
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 500 LLFAFELLDELVIKES 515
              A  L+D++  K +
Sbjct: 891 TTKALVLVDQMFAKNA 906



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 152/307 (49%), Gaps = 47/307 (15%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN  I+N+L+   C+ G +E A E+L EM    + +PN +TY T+IDG CK+G   EA
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL-HPNAVTYCTIIDGYCKSGDLAEA 716

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC------------ 305
             LF+EM  K  ++PD+  Y  L+DG CR   V+RA  I    K  GC            
Sbjct: 717 FRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALIN 774

Query: 306 ---------------------------NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
                                       PN   Y  +++  CKEG L+ AKE+F +M+N 
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            L P  I YT+L+N + + GR  E   +  E    G + D + +++I+    +EG   +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 399 LGMLEKLWY-----DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           L ++++++      DG  L+ ++ R +L+   + GE+E A +++  M+   ++P  AT  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 454 ELLVRLC 460
           EL+   C
Sbjct: 955 ELINESC 961



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 173/385 (44%), Gaps = 55/385 (14%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
            +G   +  TY  +++ L +  K +  + + R+M  +      F  G+ +N    FS   
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN---GFSKLG 641

Query: 145 LHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
             ++   +F ++    +T   P++   +  L     S +++ A+  L   +    L PN 
Sbjct: 642 NMQKASSIFDEMVEEGLT---PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPNA 697

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF- 261
             +  +I  +CK G L  AF +  EMK   +  P+   Y+TL+DG C+      AI +F 
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL-VPDSFVYTTLVDGCCRLNDVERAITIFG 756

Query: 262 -------------EEMVS----------KDQIL-------------PDALTYNVLIDGFC 285
                          +++          K ++L             P+ +TYN++ID  C
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + G ++ AK++   M+N    P V  YT+L+NG+ K G+  E   VFDE     ++PD I
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876

Query: 346 GYTTLINCFCRAGRVDEALELLKEM-----KERGCKADIVTFNIILGGLCREGKIEEALG 400
            Y+ +IN F + G   +AL L+ +M      + GCK  I T   +L G  + G++E A  
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSC 425
           ++E +       + A+   ++N SC
Sbjct: 937 VMENMVRLQYIPDSATVIELINESC 961



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 160/363 (44%), Gaps = 52/363 (14%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P L      L+ L+  N++DL  +  K   +   +  +   +++LI  HC+ G ++   +
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVER-NVVFDVKTYHMLIIAHCRAGNVQLGKD 242

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VL + +K         T +  +DG         A++L E M+ K  ++P   TY+VLIDG
Sbjct: 243 VLFKTEKE------FRTATLNVDG---------ALKLKESMICKG-LVPLKYTYDVLIDG 286

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF------------------------ 319
            C+  +++ AK ++  M + G + +   Y+ L++G                         
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346

Query: 320 -----------CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
                       KEG +++AK +FD M    L P    Y +LI  +CR   V +  ELL 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           EMK+R       T+  ++ G+C  G ++ A  +++++   G   N   Y  ++    Q  
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
               A+ +L+ M  +G  P     N L++ L KA   ++A   L  +VE G KP + ++ 
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 489 LLV 491
             +
Sbjct: 527 AFI 529



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 145/327 (44%), Gaps = 36/327 (11%)

Query: 186 QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           ++ L  SN  + + P   +  +  K       L S F  +   K ++     L ++S L 
Sbjct: 48  RDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQ---KLDSFSFLA 104

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
             LC  G F +A+ + E M+ ++   P A  ++ ++          R  +  EF+   G 
Sbjct: 105 LDLCNFGSFEKALSVVERMIERNW--PVAEVWSSIV----------RCSQ--EFV---GK 147

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
           + +   +  L +G+  +  ++EA  VF       L P       L++   R  R+D   +
Sbjct: 148 SDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI-VLNFS 424
           + K M ER    D+ T+++++   CR G ++        L  D ++  +  +R   LN  
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ--------LGKDVLFKTEKEFRTATLN-- 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
                ++ A++L   M+C+G +P   T + L+  LCK    EDA   L  +  +G   ++
Sbjct: 258 -----VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN 312

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
            +++LL++ + +GR    A  L+ E+V
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMV 339


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 217/476 (45%), Gaps = 51/476 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E++ T+    G      T+ T+LD   +    E VD +  +M     +F E  +  L+
Sbjct: 258 AQEVYETMV-MHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILI 316

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHL 196
             FS     E     FH       ++          N LIE   +  L       +++ L
Sbjct: 317 NGFSKSGKMEEA-RRFHG----DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEML 371

Query: 197 R--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + P T  +NI I+  C+ G ++ A E+L     S M+ P++++Y+TL+ G  K  +F
Sbjct: 372 NAGIYPTTSTYNIYIRALCEFGRIDDARELL-----SSMAAPDVVSYNTLMHGYIKMRKF 426

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA  LF+++ + + I P  +TYN LIDG C  G ++ A+++ E M +    P+V  YTT
Sbjct: 427 VEASLLFDDLKAGN-INPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTT 485

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KER 373
           L+ GF K G L  A E++DEM    +KPD   YTT      R G  ++A  L +EM  E 
Sbjct: 486 LLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAED 545

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-------------YLNKA----- 415
               D+  +N+ + GLC+ G +E+A+    K++  G+             YL K      
Sbjct: 546 HHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMA 605

Query: 416 -----------------SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
                            +Y ++++   + G LE+A +    M  RG  P+  T N LL  
Sbjct: 606 RDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHG 665

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +CKAG  ++A   L  + E G  P   S+ +L+   C   K     +L  E++ KE
Sbjct: 666 MCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKE 721



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 38/309 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N LI   C+ G LE A + LKE   SQ+ YP++ITY+TL+ G  KNG    A
Sbjct: 441 INPSIVTYNTLIDGLCESGNLEGA-QRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMA 499

Query: 258 IELF-----------------------------------EEMVSKDQILPDALTYNVLID 282
            E++                                   EEMV++D   PD   YNV ID
Sbjct: 500 TEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRID 559

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ G +++A +    +   G  P+   YTT++ G+ ++G+ + A++++DEM +  L P
Sbjct: 560 GLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSP 619

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
             I Y  LI+   +AGR+++A +   EMK+RG + +++T N +L G+C+ G I+EA   L
Sbjct: 620 SVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYL 679

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK- 461
            K+  +GI  NK SY I+++  C   + E+ ++L + ML +   P   T   L   L K 
Sbjct: 680 CKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 739

Query: 462 -AGMAEDAA 469
              MA D++
Sbjct: 740 HESMALDSS 748



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 32/284 (11%)

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           FE+M+ K   LP     N+++        +++A+++ E M  +G  P V  + T+++   
Sbjct: 227 FEKMIRKG-FLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCF 285

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G L+   +++ EMK   ++   + Y  LIN F ++G+++EA     +M+  G      
Sbjct: 286 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPY 345

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           +FN ++ G C++G  +EA G+ +++   GIY   ++Y I +   C+ G ++ A ELL  M
Sbjct: 346 SFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM 405

Query: 441 ----------LCRGFL---------------------PHYATSNELLVRLCKAGMAEDAA 469
                     L  G++                     P   T N L+  LC++G  E A 
Sbjct: 406 AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQ 465

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                +      P+  ++  L++   +   L  A E+ DE++ K
Sbjct: 466 RLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRK 509


>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
 gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
          Length = 2052

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 163/287 (56%), Gaps = 7/287 (2%)

Query: 200  PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK--NGRFR-- 255
            P+   +NILI   CK G LE A + L EM +++    +++TY+TLI GLC+  NGRFR  
Sbjct: 1765 PDIYTYNILINALCKVGRLEDA-QGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVE 1823

Query: 256  EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
             A  LFEEMV K    P ++TY V+ID   R    ++A+K+++ M  NGC  ++  Y  L
Sbjct: 1824 RAFRLFEEMVDKGHT-PTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNML 1882

Query: 316  MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
            +N F K G + +A ++F EM      PD + Y ++++ FC+AG+V+EA +L  EMK RG 
Sbjct: 1883 INRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGI 1942

Query: 376  KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
              +  T+  I     + G++++A   L ++  +G+ ++  SY  +++  C+ G+ +   +
Sbjct: 1943 FPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGKGKLGFQ 2001

Query: 436  LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
            LLR ML +GF P+  T N +   L K    +DA I +  L +    P
Sbjct: 2002 LLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSP 2048



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 199/391 (50%), Gaps = 10/391 (2%)

Query: 127  KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
            K    I ++++ H  +     +  E  H  H  T    +  A +  L  L+   Q   A 
Sbjct: 1625 KLSTDIVVDVLNHARDVEPTIQFFEWCHGRHGYTH---TAFAFNRLLEFLVNKRQYKRAH 1681

Query: 187  NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
              L   ++    + N   ++ +++ +C+ G    A  +L+ MKK+++   N   Y+ ++ 
Sbjct: 1682 QMLIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVP-ANAKLYNIILT 1740

Query: 247  GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
             LCK+G+ +EA++L   M +     PD  TYN+LI+  C+ G+++ A+ ++E M+   C 
Sbjct: 1741 HLCKHGKEKEALDLLHSMATT-SCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECP 1799

Query: 307  PNVFNYTTLMNGFCKEG----KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
             ++  Y TL++G C++G    +++ A  +F+EM +    P ++ YT +I+   R    ++
Sbjct: 1800 TDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQ 1859

Query: 363  ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
            A ++L  M E GC  D+VT+N+++    + G +++A+ +  ++   G   +  +Y  +++
Sbjct: 1860 AQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVD 1919

Query: 423  FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
              C+ G++E+A +L   M  RG  P+  T   +     KAG  +DA   L  + + G   
Sbjct: 1920 GFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV- 1978

Query: 483  ESDSWALLVELICRGRKLLFAFELLDELVIK 513
            ++ S+  L+  IC+  K    F+LL E++ K
Sbjct: 1979 DAISYVALISTICKLGKGKLGFQLLREMLEK 2009



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 153/286 (53%), Gaps = 7/286 (2%)

Query: 201  NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
            N  ++NI++ H CK G  + A ++L  M  +  + P++ TY+ LI+ LCK GR  +A  L
Sbjct: 1731 NAKLYNIILTHLCKHGKEKEALDLLHSMATTSCA-PDIYTYNILINALCKVGRLEDAQGL 1789

Query: 261  FEEMVSKDQILPDALTYNVLIDGFCRGG----KVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
             E M ++ +   D +TYN LI G CR G    +V+RA ++ E M + G  P    YT ++
Sbjct: 1790 VEMMQAR-ECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVI 1848

Query: 317  NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            +   +    ++A++V D M       D + Y  LIN F +AG +D+A++L  EM  RGC 
Sbjct: 1849 DALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCI 1908

Query: 377  ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
             D+VT+N I+ G C+ GK+EEA  +  ++   GI+ N  +Y  + +   + G ++ A   
Sbjct: 1909 PDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAY 1968

Query: 437  LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
            L  M   G +   +    L+  +CK G  +     L  ++E GFKP
Sbjct: 1969 LVEMRKEGLVDAISYV-ALISTICKLGKGKLGFQLLREMLEKGFKP 2013



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 40/254 (15%)

Query: 89   KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
            KG    + TY  ++D L R K  E    VL  M    C F    +  L+  F+   + ++
Sbjct: 1835 KGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDK 1894

Query: 149  VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
             +++F        E P+   I                              P+   +N +
Sbjct: 1895 AMDLF-------VEMPTRGCI------------------------------PDVVTYNSI 1917

Query: 209  IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
            +   CK G +E A ++  EMK   + +PN  TY+++ D   K GR ++A     EM  + 
Sbjct: 1918 VDGFCKAGKVEEANKLFAEMKARGI-FPNGRTYTSITDACLKAGRMQDAHAYLVEM--RK 1974

Query: 269  QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + L DA++Y  LI   C+ GK     +++  M   G  PN+  +  +     KE    +A
Sbjct: 1975 EGLVDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDA 2034

Query: 329  KEVFDEMKNFLLKP 342
            K +  E++     P
Sbjct: 2035 KIMIQELRQQHSSP 2048


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 218/443 (49%), Gaps = 29/443 (6%)

Query: 75  PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
           P  AL +FN+ S Q+GF H + + + +L  L  + K     +++ Q+             
Sbjct: 18  PLQALSLFNS-SIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVP 76

Query: 135 NLMKHFSN--------CSLHERVLEMFHKIHPITRE--------------KPSLKAISTC 172
           +L+ H +           L+E ++    K   + +               +P++   ++ 
Sbjct: 77  SLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSL 134

Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           L  L+ SN  + A  +L ++    R+K +   F I+IK  C+ G L+ +F++L  ++   
Sbjct: 135 LGSLVRSNCFEKA--WLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG 192

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
           +S PN++ Y+TLIDG CKNG    A   F++M  +  ++ +  T+ VLI+G  + G    
Sbjct: 193 LS-PNVVIYTTLIDGCCKNGDIERARLFFDKM-GEMGLVANQYTFTVLINGLFKKGLKKD 250

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
              + E MK NG  PN++ Y  LMN +C EGK+  A ++FDEM+   ++ + + Y TLI 
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIG 310

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             CR  RV EA +L+ +MK+     +++T+N ++GG C  G +++A  +L++L  +G+  
Sbjct: 311 GMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSP 370

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  +Y I++    + G  +   +L R M  RG  P   T   L+    +    E A    
Sbjct: 371 SLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIY 430

Query: 473 FGLVEMGFKPESDSWALLVELIC 495
             + + G  P+   + +L+  +C
Sbjct: 431 SSMEKFGLVPDVYVYGVLIHGLC 453



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 162/287 (56%), Gaps = 2/287 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN   +N L+  +C  G +  AF++  EM++  +   N++TY+TLI G+C+  R  EA
Sbjct: 263 LFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVE-ANVVTYNTLIGGMCREERVWEA 321

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            +L ++M  K  + P+ +TYN LI GFC  G +D+A  +++ +K+NG +P++  Y  L+ 
Sbjct: 322 EKLVDQM-KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIE 380

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+ K G  +   ++  EM+   + P  +  T LI+ + R   +++A ++   M++ G   
Sbjct: 381 GYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVP 440

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+  + +++ GLC +G ++E+  +   +    +  +   Y  +++  C++    +A+ LL
Sbjct: 441 DVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLL 500

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           R M  +G +P+ A+ + ++  LCK G  E+A + L  ++E+  KP +
Sbjct: 501 REMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSA 547



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 3/222 (1%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+L   +T +    +   +D A + L     +  L P+   +NILI+ + K G  +   +
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSLLDQLKSN-GLSPSLVTYNILIEGYSKAGNWKGVAD 393

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           + +EM+   +S P+ +T + LID   +     +A +++  M  K  ++PD   Y VLI G
Sbjct: 394 LAREMEGRGIS-PSKVTCTVLIDAYVRLQEMEKAFQIYSSM-EKFGLVPDVYVYGVLIHG 451

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
            C  G +  + K+   M      P+   Y T+++G+CKE     A  +  EM+   L P+
Sbjct: 452 LCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPN 511

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
              Y+++I   C+ G+ +EA  LL +M E   K      N+I
Sbjct: 512 VASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 159/301 (52%), Gaps = 1/301 (0%)

Query: 196  LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
            L  KPN   F  LI   CK+G+++ AFE+L+EM ++    PN+ T++ LIDGLCK G   
Sbjct: 882  LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK-PNVYTHTALIDGLCKRGWTE 940

Query: 256  EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            +A  LF ++V  D   P+  TY  +I G+C+  K++RA+ +   MK  G  PNV  YTTL
Sbjct: 941  KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 1000

Query: 316  MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
            +NG CK G    A E+ + M +    P+   Y   I+  C+  R  EA ELL +    G 
Sbjct: 1001 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 1060

Query: 376  KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
            +AD VT+ I++   C++  I +AL    ++   G   +     I++   C++ +++++  
Sbjct: 1061 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 1120

Query: 436  LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            L +L++  G +P   T   ++   CK G  + A      +   G  P+S ++  L+  +C
Sbjct: 1121 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 1180

Query: 496  R 496
            +
Sbjct: 1181 K 1181



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 158/313 (50%), Gaps = 3/313 (0%)

Query: 199  KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            KPN      LI   CKRG  E AF +  ++ +S    PN+ TY+++I G CK  +   A 
Sbjct: 920  KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 979

Query: 259  ELFEEMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF  M  K+Q + P+  TY  LI+G C+ G   RA ++M  M + G  PN++ Y   ++
Sbjct: 980  MLFSRM--KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 1037

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              CK+ +  EA E+ ++  +  L+ D + YT LI   C+   +++AL     M + G +A
Sbjct: 1038 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 1097

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            D+   NI++   CR+ K++E+  + + +   G+   K +Y  +++  C++G+++ A++  
Sbjct: 1098 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 1157

Query: 438  RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
              M   G +P   T   L+  LCK  M ++A      +++ G  P   +   L    C+ 
Sbjct: 1158 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 1217

Query: 498  RKLLFAFELLDEL 510
                 A  LL+ L
Sbjct: 1218 NDSANAMILLEPL 1230



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 169/370 (45%), Gaps = 41/370 (11%)

Query: 164  PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAF 222
            PS   ++  L + +E   ++ A+N   +    +R + P++  + +++    + G ++ A 
Sbjct: 781  PSSITMNCVLEIAVELGLIEYAENV--FDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 838

Query: 223  EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
              L  M +     P+  T + ++  LC+NG    AI  F +M+      P+ + +  LID
Sbjct: 839  RWLTGMIQRGF-IPDNATCTLILTALCENGLVNRAIWYFRKMIDLG-FKPNLINFTSLID 896

Query: 283  GFCRGGKVDRAKKIMEFMKNNGCNPNVF-------------------------------- 310
            G C+ G + +A +++E M  NG  PNV+                                
Sbjct: 897  GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK 956

Query: 311  ----NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
                 YT+++ G+CKE KL  A+ +F  MK   L P+   YTTLIN  C+AG    A EL
Sbjct: 957  PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 1016

Query: 367  LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
            +  M + G   +I T+N  +  LC++ +  EA  +L K +  G+  +  +Y I++   C+
Sbjct: 1017 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 1076

Query: 427  KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            + ++ +A+     M   GF      +N L+   C+    +++      +V +G  P  ++
Sbjct: 1077 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 1136

Query: 487  WALLVELICR 496
            +  ++   C+
Sbjct: 1137 YTSMISCYCK 1146



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 13/272 (4%)

Query: 253 RFREAIELFEEMVSKDQILPDA------LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           +FR  + L+  +V+ D +L +            ++  F   G+++ A  ++  M+N G  
Sbjct: 723 KFRHFMRLY--LVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLT 780

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL-INCFCRAGRVDEALE 365
           P+      ++    + G ++ A+ VFDEM    + PD+  Y  + I CF R G++ EA  
Sbjct: 781 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADR 839

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
            L  M +RG   D  T  +IL  LC  G +  A+    K+   G   N  ++  +++  C
Sbjct: 840 WLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC 899

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPES 484
           +KG +++A E+L  M+  G+ P+  T   L+  LCK G  E A      LV    +KP  
Sbjct: 900 KKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNV 959

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIKESG 516
            ++  ++   C+  KL  A  L   +  KE G
Sbjct: 960 HTYTSMIGGYCKEDKLNRAEMLFSRM--KEQG 989



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 5/208 (2%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            L+ +   + ILI+  CK+  +  A      M K+     ++   + LI   C+  + +E+
Sbjct: 1060 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE-ADMRLNNILIAAFCRQKKMKES 1118

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
              LF+ +VS   ++P   TY  +I  +C+ G +D A K    MK +GC P+ F Y +L++
Sbjct: 1119 ERLFQLVVSLG-LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 1177

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            G CK+  + EA ++++ M +  L P  +   TL   +C+      A+ LL+ + +   K 
Sbjct: 1178 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK---KL 1234

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKL 405
             I T   ++  LC E K+  A    +KL
Sbjct: 1235 WIRTVRTLVRKLCSEKKVGVAALFFQKL 1262


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 191/356 (53%), Gaps = 10/356 (2%)

Query: 158 PITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
           P  R    L +  TC NLL      D +   L  +++    +     +N L+     RG 
Sbjct: 9   PDARFLSFLVSSCTCANLL------DASATLLSKASE-FGCRVEAYAYNKLMSSLIGRGR 61

Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           +     + +   + ++  P++ +++ +I G+C+ G+ ++A+EL E M ++    PD +T+
Sbjct: 62  VHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM-NEFGCSPDTVTH 120

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
           N+L+DG CR  +V R  +++  ++ +G C PNV  +T++++G+CK GKL++A  V+++M 
Sbjct: 121 NILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMV 180

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
              + P+T+ Y  LIN + + G +  A+E+ ++M    C  D+VTF+ ++ G CR G+++
Sbjct: 181 ASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLD 240

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLMLCRGFLPHYATSNEL 455
           +AL +   +    I  N  ++ I+++  C++   ++AI LL  L L     P     N +
Sbjct: 241 DALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPV 300

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           +  LCK G  ++A +   G+ E G +P+  ++ +L+   C   ++  A     E+V
Sbjct: 301 IDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMV 356



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 155/287 (54%), Gaps = 2/287 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   FN++IK  C+ G ++ A E+++ M +   S P+ +T++ L+DGLC+        
Sbjct: 79  SPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCS-PDTVTHNILVDGLCRTNEVSRGH 137

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+   +      +P+ +T+  +I G+C+ GK++ A  +   M  +G  PN   Y  L+NG
Sbjct: 138 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 197

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           + K G L  A EV+ +M      PD + +++LI+ +CR G++D+AL +  +M +   + +
Sbjct: 198 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 257

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + TF+II+  LC++ + +EA+G+L +L     I      Y  V++  C+ G++++A  + 
Sbjct: 258 VYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIR 317

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           + M  +G  P   T   L++  C      +A +    +VE G  P+S
Sbjct: 318 KGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 364



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 180/359 (50%), Gaps = 3/359 (0%)

Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
            +A   +L + +   C+     +  LM           V+ +F +        P + + +
Sbjct: 27  LDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFN 86

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
             +  +    QV  A   ++  N+     P+T   NIL+   C+   +    EVL+ +++
Sbjct: 87  VVIKGVCRVGQVQKALELVERMNE-FGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQR 145

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
             +  PN++T++++I G CK G+  +A+ ++ +MV+   I+P+ +TYNVLI+G+ + G +
Sbjct: 146 DGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASG-IMPNTVTYNVLINGYGKVGDL 204

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
             A ++ + M    C P+V  +++L++G+C+ G+L +A  ++ +M    ++P+   ++ +
Sbjct: 205 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 264

Query: 351 INCFCRAGRVDEALELLKEMKER-GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           I+  C+  R DEA+ LL E+  R         +N ++  LC+ GK++EA  + + +   G
Sbjct: 265 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 324

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
              +K +Y I++   C K  + +AI     M+  G  P   T N  +  L KAGM  + 
Sbjct: 325 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 383



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 11/297 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-TCKFHEGIFL 134
           Q ALE+   ++E  G + +  T+  ++D L R  +      VLR++  +  C  +   F 
Sbjct: 99  QKALELVERMNE-FGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFT 157

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYS 192
           +++  +      E  + +++ +         +   +   N+LI       DL      Y 
Sbjct: 158 SVISGYCKAGKLEDAMAVYNDM-----VASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 212

Query: 193 NQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
               LR  P+   F+ LI  +C+ G L+ A  +  +M + ++  PN+ T+S +I  LCK 
Sbjct: 213 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQ-PNVYTFSIIIHSLCKQ 271

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R  EAI L  E+  +  I P A  YN +ID  C+ GKVD A  I + M+  GC P+ + 
Sbjct: 272 NRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYT 331

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           YT L+ G+C + ++ EA   F EM      PD+I     I+C  +AG  +E   +++
Sbjct: 332 YTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 388



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 128/243 (52%), Gaps = 2/243 (0%)

Query: 273 DALTYNVLIDGFCRGGKVDRAKKIME-FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           +A  YN L+      G+V     + E ++++   +P+V+++  ++ G C+ G++Q+A E+
Sbjct: 45  EAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALEL 104

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG-CKADIVTFNIILGGLC 390
            + M  F   PDT+ +  L++  CR   V    E+L+ ++  G C  ++VTF  ++ G C
Sbjct: 105 VERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYC 164

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
           + GK+E+A+ +   +   GI  N  +Y +++N   + G+L  A+E+ + M      P   
Sbjct: 165 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 224

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           T + L+   C+ G  +DA      + +   +P   ++++++  +C+  +   A  LL+EL
Sbjct: 225 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL 284

Query: 511 VIK 513
            ++
Sbjct: 285 NLR 287


>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 363

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 5/311 (1%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF 140
           +F     ++ +  + A Y  ++D+LA  ++F  V+ +L +   E  +F +  F  L+K +
Sbjct: 57  VFRKACARRDYKPSEALYGLMIDRLAGARRFGDVEELLARARAERFRFSDDFFYRLIKMY 116

Query: 141 SNCSLH-ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
            N + H E+ +E  + +       PS K  +  L++L+   Q ++       S   L ++
Sbjct: 117 GNVANHPEKAMETLYAMSEYG-CWPSTKTFNYVLHMLVCRRQYEVVHEVYS-SAPRLGVE 174

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
            +TC FNILIK  C+ G    A  +L EM K Q   PN +TYSTL+  LC+N R  EA E
Sbjct: 175 LDTCCFNILIKGLCQFGRFNEALSLLDEMPK-QDCRPNAMTYSTLMHFLCRNCRVDEAFE 233

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LFE M  K++I  D + YN+L+ G CR G+V  A  + + M + GC+PN   Y  L++G 
Sbjct: 234 LFERM-RKEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGL 292

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
                  EAK++   M    L+P    Y  LI+ FC    +D+A  +LK+M ++G    +
Sbjct: 293 VASKNFVEAKDLVGMMSAESLRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRM 352

Query: 380 VTFNIILGGLC 390
            T+  +L  LC
Sbjct: 353 STWTKLLTSLC 363



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 35/295 (11%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+   Y  +ID L    RF +  EL     ++     D   Y ++          ++A +
Sbjct: 69  PSEALYGLMIDRLAGARRFGDVEELLARARAERFRFSDDFFYRLIKMYGNVANHPEKAME 128

Query: 296 IMEFMKNNGCNPNV--FNYT---------------------------------TLMNGFC 320
            +  M   GC P+   FNY                                   L+ G C
Sbjct: 129 TLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCFNILIKGLC 188

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           + G+  EA  + DEM     +P+ + Y+TL++  CR  RVDEA EL + M++    AD V
Sbjct: 189 QFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTV 248

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +NI++ GLCREG++  A  + + +   G + N  +Y+++L+         +A +L+ +M
Sbjct: 249 VYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMM 308

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
                 P +++   L+   C     +DA   L  +V+ GF P   +W  L+  +C
Sbjct: 309 SAESLRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKLLTSLC 363



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 79/182 (43%)

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           ++A E    M  +   P T  +  +++      + +   E+       G + D   FNI+
Sbjct: 124 EKAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCFNIL 183

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           + GLC+ G+  EAL +L+++       N  +Y  +++F C+   +++A EL   M     
Sbjct: 184 IKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEI 243

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
                  N L+  LC+ G    A      +   G  P S ++ +L++ +   +  + A +
Sbjct: 244 DADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKD 303

Query: 506 LL 507
           L+
Sbjct: 304 LV 305


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 225/483 (46%), Gaps = 62/483 (12%)

Query: 82  FNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-----------TCKFHE 130
           F  V       H+  +  T++  LA++K+F+    +L ++                + H+
Sbjct: 62  FKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHD 121

Query: 131 G------IFLNLMKHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLIESNQV 182
                  I   L+  ++N  + +  +++F   ++H     KP L A +  LN L ++   
Sbjct: 122 DPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGF---KPHLHACTVLLNSLAKARLT 178

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK------------- 229
           ++     K     + + PN  IFN+LI   CK G +E A ++L EM+             
Sbjct: 179 NMVWKVYK-KMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNT 237

Query: 230 ------KSQMSY---------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
                 K  M Y               P+++TY++LI G C+ GR REA+ LF E+   +
Sbjct: 238 LISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI---N 294

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              P+ +TY  LIDG+CR   ++ A ++ E M+  G +P V  Y +++   C+EGK+++A
Sbjct: 295 GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDA 354

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             + +EM    ++PD +   TLIN +C+ G +  A+++ K+M E G K D  TF  ++ G
Sbjct: 355 NRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHG 414

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C+  +++ A   L ++   G   + ++Y  +++    +   E  I L   +  +G    
Sbjct: 415 FCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVD 474

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFELL 507
            +    L+ RLCK    E A   +F L++  G K +S  +  L     +  K + A ++L
Sbjct: 475 ISVYRALIRRLCKIDKIESAE-RIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDML 533

Query: 508 DEL 510
           DE+
Sbjct: 534 DEM 536



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 37/211 (17%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    +N +++  C+ G ++ A  +L EM + ++  P+ +T +TLI+  CK G    A
Sbjct: 331 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVE-PDNVTCNTLINAYCKIGDMGSA 389

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +++ ++M+    + PD  T+  LI GFC+  +VD AK+ +  M + G +P+   Y+ L++
Sbjct: 390 MKVKKKMLEAG-LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVD 448

Query: 318 GF-----------------------------------CKEGKLQEAKEVFDEMKNFLLKP 342
            +                                   CK  K++ A+ +F  M+   +K 
Sbjct: 449 SYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKG 508

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           D++ YT+L   + +AG+   A ++L EM +R
Sbjct: 509 DSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 539


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 234/489 (47%), Gaps = 37/489 (7%)

Query: 43  PVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSE------------QKG 90
           P   S  C+ A +     SHG A  +  C K     L +    +             Q G
Sbjct: 173 PDTCSTLCLSAFRE--MASHGVAPDVKDCNK----VLRVLRDAARWDDMSAVHAEMLQLG 226

Query: 91  FNHNNATYATILDKLARYKKFEAVDAVLRQMTY--ETCKFHEGIFLNLMKHFSNCSLHER 148
              +  TY T+LD  ++  + + +D +L++M     +C  ++  +  ++   +     E 
Sbjct: 227 IEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEE 286

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN------QHLRLKPNT 202
             E+  ++      + S KA S   N LI      LA+ F+K  +      ++  + P  
Sbjct: 287 AAELVEEM------RLSKKASSFTYNPLITGL---LARGFVKKVDDLQLEMENEGIMPTV 337

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +N +I    + G +E+A     EM+   +  P++ITY++L++G CK G  +EA+ LF 
Sbjct: 338 VTYNAMIHGLLQSGQIEAAQAKFVEMRAMGL-LPDVITYNSLLNGYCKAGNQKEALLLFG 396

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           ++  +  + P  LTYN+LIDG+CR G ++ A+++ E M   GC P+V+ YT LM G    
Sbjct: 397 DL-RRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNV 455

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
             L   +E FDEM +  L+PD   Y T I      G + ++ +L + +   G  +D VT+
Sbjct: 456 CSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTY 515

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           NI++ GLC+ G +++A  ++ ++  +G+  +  +Y  +++  C++G L +A +    M+ 
Sbjct: 516 NILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMIS 575

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G  P   T   ++   C+ G    A      ++E G +P   ++ +L+  +CR  +   
Sbjct: 576 DGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 635

Query: 503 AFELLDELV 511
           A+    E++
Sbjct: 636 AYRHFYEML 644



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 161/329 (48%), Gaps = 40/329 (12%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQ-NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           P++   +  ++ L++S Q++ AQ  F++   + + L P+   +N L+  +CK G  + A 
Sbjct: 335 PTVVTYNAMIHGLLQSGQIEAAQAKFVEM--RAMGLLPDVITYNSLLNGYCKAGNQKEAL 392

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            +  +++++ ++ P ++TY+ LIDG C+ G   EA  L EEMV +   LPD  TY +L+ 
Sbjct: 393 LLFGDLRRAGLA-PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG-CLPDVYTYTILMK 450

Query: 283 G-----------------FCRG------------------GKVDRAKKIMEFMKNNGCNP 307
           G                   +G                  G + ++ ++ E +   G + 
Sbjct: 451 GSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISS 510

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           +   Y  L++G CK G L++A+E+  +M +  L+PD I YT LI+  C  G + EA +  
Sbjct: 511 DTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFF 570

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            +M   G     VT+ +I+   CR G +  A G   K+  +G+  N+ +Y ++++  C+ 
Sbjct: 571 NDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 630

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELL 456
           G  + A      ML RG +P+  T   L+
Sbjct: 631 GRTQLAYRHFYEMLERGLVPNKYTYTLLI 659



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 2/191 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N  I      G +  +F+ L+E+   +    + +TY+ LIDGLCK G  ++A
Sbjct: 473 LRPDCFAYNTRICAEITLGDISKSFQ-LREVIMLEGISSDTVTYNILIDGLCKTGNLKDA 531

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL  +M+S + + PD +TY  LI   C  G +  A+K    M ++G  P+   YT +++
Sbjct: 532 EELMMQMIS-NGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIH 590

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            +C+ G L  A   F +M    ++P+ I Y  LI+  CR GR   A     EM ERG   
Sbjct: 591 AYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVP 650

Query: 378 DIVTFNIILGG 388
           +  T+ +++ G
Sbjct: 651 NKYTYTLLIDG 661



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 3/246 (1%)

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTTLMNGFCKEGKLQE 327
           I P  +TYN L+D F + G+ D+   +++ M+  G  C PN   Y  ++ G  ++G L+E
Sbjct: 227 IEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEE 286

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A E+ +EM+    K  +  Y  LI      G V +  +L  EM+  G    +VT+N ++ 
Sbjct: 287 AAELVEEMR-LSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIH 345

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GL + G+IE A     ++   G+  +  +Y  +LN  C+ G  ++A+ L   +   G  P
Sbjct: 346 GLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAP 405

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
              T N L+   C+ G  E+A      +VE G  P+  ++ +L++       L    E  
Sbjct: 406 TVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFF 465

Query: 508 DELVIK 513
           DE++ K
Sbjct: 466 DEMLSK 471


>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
 gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
          Length = 363

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 146/251 (58%), Gaps = 3/251 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N LI   CK G +     +  EMK ++   P++ITYS LI G CK  R   A  
Sbjct: 43  PDINTYNTLIDGLCKTGRVPEVNRLFGEMK-AKFCNPDVITYSCLIGGFCKLDRINMACT 101

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF++M+ K   LPD +T+  L++G+C  G VD A++++E +  + C+P+V+ YT+L++GF
Sbjct: 102 LFDDML-KQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGF 160

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK  ++ EA  V   M     +P+ + YT LI+ FC AG+   A +LL+EM   G + + 
Sbjct: 161 CKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNA 220

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWY-DGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           +T+  ++GG C  G +EEA  MLE+L   +    +  +YR++++  C+ G +  A+ELL 
Sbjct: 221 ITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLE 280

Query: 439 LMLCRGFLPHY 449
            +   G  P +
Sbjct: 281 AIKQSGTPPRH 291



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 150/284 (52%), Gaps = 6/284 (2%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN++TY++LI G C        + L EEM +    LPD  TYN LIDG C+ G+V    +
Sbjct: 8   PNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATG-CLPDINTYNTLIDGLCKTGRVPEVNR 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +   MK   CNP+V  Y+ L+ GFCK  ++  A  +FD+M      PD + + TL+  +C
Sbjct: 67  LFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYC 126

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
            AG VD+A  LL+E+    C  D+ T+  ++ G C+  ++ EA  +L+++       N  
Sbjct: 127 NAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVV 186

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
            Y  +++  C  G+   A +LL  M+  G  P+  T   L+   C  G  E+A   L  L
Sbjct: 187 IYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERL 246

Query: 476 VEMGFKPESDSWA--LLVELICRGRKLLFAFELLDELVIKESGT 517
            E     ++D +A  ++++ +CR  ++  A ELL+   IK+SGT
Sbjct: 247 -ERNENCKADMFAYRVMMDGLCRTGRMSAALELLE--AIKQSGT 287



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 120/241 (49%)

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
           I P+ +TYN LI GFC    VD    +ME M   GC P++  Y TL++G CK G++ E  
Sbjct: 6   IEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVN 65

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
            +F EMK     PD I Y+ LI  FC+  R++ A  L  +M ++    D+VTF  ++ G 
Sbjct: 66  RLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGY 125

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
           C  G +++A  +LE++       +  +Y  +++  C+   + +A  +L+ M      P+ 
Sbjct: 126 CNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNV 185

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
                L+   C AG    A   L  +V  G +P + ++  L+   C    L  A ++L+ 
Sbjct: 186 VIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLER 245

Query: 510 L 510
           L
Sbjct: 246 L 246



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 96/208 (46%)

Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
           G  PN+  Y +L++GFC    +     + +EM      PD   Y TLI+  C+ GRV E 
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
             L  EMK + C  D++T++ ++GG C+  +I  A  + + +       +  ++  ++  
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C  G ++ A  LL  ++     P   T   L+   CK     +A   L  + +   +P 
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPN 184

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
              +  L++  C   K   A++LL+E+V
Sbjct: 185 VVIYTALIDAFCSAGKPTVAYKLLEEMV 212



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 15/172 (8%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           +PN  I+  LI   C  G    A+++L+EM  + +  PN ITY +LI G C  G   EA 
Sbjct: 182 QPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQ-PNAITYRSLIGGFCGTGDLEEAH 240

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           ++ E +   +    D   Y V++DG CR G++  A +++E +K +G  P    Y  L+ G
Sbjct: 241 KMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 300

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
              E  L               +P+   Y  +I    R GR ++A  L  E+
Sbjct: 301 ---EMTLSRKG-----------RPNAKVYEAVIQELAREGRHEKANALSDEL 338



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 15/138 (10%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN   +  LI   C  G LE A ++L+ +++++    ++  Y  ++DGLC+ GR   A
Sbjct: 216 VQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAA 275

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +EL E  + +    P    Y  LI G              E   +    PN   Y  ++ 
Sbjct: 276 LELLEA-IKQSGTPPRHDIYVALIRG--------------EMTLSRKGRPNAKVYEAVIQ 320

Query: 318 GFCKEGKLQEAKEVFDEM 335
              +EG+ ++A  + DE+
Sbjct: 321 ELAREGRHEKANALSDEL 338



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/176 (19%), Positives = 70/176 (39%), Gaps = 35/176 (19%)

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK- 432
           G + ++VT+N ++ G C    ++  L ++E++   G   +  +Y  +++  C+ G + + 
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 433 ----------------------------------AIELLRLMLCRGFLPHYATSNELLVR 458
                                             A  L   ML +  LP   T   L+  
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
            C AG+ +DA   L  +V     P+  ++  LV+  C+ ++++ A  +L  +   E
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGE 180


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 198/369 (53%), Gaps = 6/369 (1%)

Query: 146 HERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH-LRLKPNTCI 204
           H   L++F ++   +   P     S        +  +D A   L  ++Q   R++P    
Sbjct: 127 HRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYA-- 184

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N L+     RG  + A  + +   +  +  P+  +++ +I G+C+ G F++A+EL E M
Sbjct: 185 YNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERM 244

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNGFCKEG 323
            ++    PD +T+N+L+DG CR  +V+R   ++  ++ +G C PNV  YT++++G+CK G
Sbjct: 245 -TEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAG 303

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           ++++A  V+++M     +P+T+ Y  LIN + +A  ++ A+ + +++  R C  D+VTF+
Sbjct: 304 RMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFS 363

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G CR G++++A+ + +++    I  N  ++ I+++  C++    +A+  LR +  R
Sbjct: 364 SLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMR 423

Query: 444 G-FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
               P     N ++  LCK G  E+A + +  + E G  P+  ++ +L+   C   ++  
Sbjct: 424 ADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPE 483

Query: 503 AFELLDELV 511
           A  L  ++V
Sbjct: 484 AITLFHKMV 492



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 200/409 (48%), Gaps = 5/409 (1%)

Query: 78  ALEIFNTV-SEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL 136
           AL IF+ + S       +  +Y+ ++  L R  +      +  QMT ++    + +F + 
Sbjct: 93  ALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSF 152

Query: 137 MK-HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
           +    +N  L +  + +  K     R +    A +  LNLLI   +   A    +   Q 
Sbjct: 153 VAGSCTNAGLLDAAVTLLTKASQFGR-RIEPYAYNNLLNLLIARGRAQDAVALFESWIQD 211

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
               P+   FN++IK  C+ G  + A E+++ M +   S P+ IT++ L+DGLC+  +  
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCS-PDTITHNILVDGLCRAKQVN 270

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
              +L   +      +P+ +TY  +I G+C+ G+++ A  +   M  +G  PN   Y  L
Sbjct: 271 RGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVL 330

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG+ K   ++ A  ++ ++      PD + +++LI+ +CR G++D+A+ + KEM +   
Sbjct: 331 INGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHI 390

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           + ++ TF+II+  LC++ +  EALG L +L     I      Y  V++  C+ G++E+A 
Sbjct: 391 QPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEAN 450

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            ++  M  +G  P   T   L++  C  G   +A      +VE G +P+
Sbjct: 451 LIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPD 499



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 159/332 (47%), Gaps = 38/332 (11%)

Query: 220 SAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
           SA  +   +    +S P +  +YS +I  LC++GR R+A++LF++M  +   LPDA+ ++
Sbjct: 92  SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS 151

Query: 279 VLIDGFCRGGKVDRA-----------KKIMEFMKNNGCN--------------------- 306
            +       G +D A           ++I  +  NN  N                     
Sbjct: 152 FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQD 211

Query: 307 ----PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
               P+ +++  ++ G C+ G  Q+A E+ + M  F   PDTI +  L++  CRA +V+ 
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNR 271

Query: 363 ALELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
             +LL+ ++  G C  ++VT+  ++ G C+ G++E+AL +   +   G   N  +Y +++
Sbjct: 272 GHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLI 331

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           N   +  ++E A+ + R ++ R   P   T + L+   C+ G  +DA      + +   +
Sbjct: 332 NGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQ 391

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P   ++++++  +C+  +   A   L EL ++
Sbjct: 392 PNVYTFSIIIHSLCKQNRSAEALGFLRELNMR 423



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 146/296 (49%), Gaps = 11/296 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-TCKFHEGIFL 134
           Q ALE+   ++E  G + +  T+  ++D L R K+      +LR++  +  C  +   + 
Sbjct: 235 QKALELVERMTE-FGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYT 293

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYS 192
           +++  +      E  L +++ +      +   +  +   N+LI      +D+      Y 
Sbjct: 294 SVISGYCKAGRMEDALSVYNDM-----LESGTRPNTVTYNVLINGYGKALDMESAVRMYR 348

Query: 193 NQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
              LR   P+   F+ LI  +C+ G L+ A  + KEM +  +  PN+ T+S +I  LCK 
Sbjct: 349 QLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQ-PNVYTFSIIIHSLCKQ 407

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R  EA+    E+  +  I P    YN +ID  C+GG+V+ A  I+  M+  GC+P+ + 
Sbjct: 408 NRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYT 467

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           YT L+ G C +G++ EA  +F +M     +PD I   + I+C  +AG  +E  +++
Sbjct: 468 YTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM 523



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 38/258 (14%)

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L  + QV+   + L+   +     PN   +  +I  +CK G +E A  V  +M +S  + 
Sbjct: 263 LCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESG-TR 321

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           PN +TY+ LI+G  K      A+ ++ +++ + +  PD +T++ LIDG+CR G++D A +
Sbjct: 322 PNTVTYNVLINGYGKALDMESAVRMYRQLILR-RCPPDVVTFSSLIDGYCRCGQLDDAMR 380

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKE--------------------------------- 322
           I + M  +   PNV+ ++ +++  CK+                                 
Sbjct: 381 IWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDIL 440

Query: 323 ---GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
              G+++EA  +  +M+     PD   YT LI   C  GR+ EA+ L  +M E GC+ D 
Sbjct: 441 CKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDK 500

Query: 380 VTFNIILGGLCREGKIEE 397
           +T N  +  + + G   E
Sbjct: 501 ITVNSFISCVLKAGMPNE 518


>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 179/343 (52%), Gaps = 6/343 (1%)

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           ++ +   +      N+V  A   L+ S +   L P    FN LI   CK        E++
Sbjct: 263 IETVGYLIQAFCNDNKVSRAYEILRQSLED-GLTPCNDAFNKLISGFCKEKNHHRVLELV 321

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-ILPDALTYNVLIDGF 284
             M     + P++ TY  +I+G CKN    +A E+F  +  KD+   PD + Y  LI GF
Sbjct: 322 HTMIVKNRN-PDIFTYQEIINGFCKNWMTLQAFEVFNAL--KDRGYAPDMVMYTTLIHGF 378

Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
           C+ G+++ A K+   M + G  PN ++Y TL+ GFCK G L EA +++ +M +   K  T
Sbjct: 379 CKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETT 438

Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
           +   TLI   C  GR DEA +  +EM  +    D++T+N ++ G CREGK+ ++  +L++
Sbjct: 439 LSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKE 498

Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
           L   G+  + +SY  ++   CQ G +++A E+   M  RG  P   T + ++  LC+ G 
Sbjct: 499 LQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGY 558

Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVE-LICRGRKLLFAFEL 506
             +    L  +++   KP+ +++  L++ LI  G++LL   ++
Sbjct: 559 VVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKELLLELKM 601



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 139/271 (51%), Gaps = 1/271 (0%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T   LI   C + +   A E+  + + +D + P    +N LI GFC+     R  +++  
Sbjct: 265 TVGYLIQAFCNDNKVSRAYEILRQSL-EDGLTPCNDAFNKLISGFCKEKNHHRVLELVHT 323

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M     NP++F Y  ++NGFCK     +A EVF+ +K+    PD + YTTLI+ FC+ G+
Sbjct: 324 MIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQ 383

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A +L  EM ++G   +  ++N ++ G C+ G ++EA+ + +K+   G      S   
Sbjct: 384 LEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNT 443

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C  G  ++A +  R M C+  +    T N L+   C+ G    +   L  L   G
Sbjct: 444 LILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKG 503

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +P + S+A L++ +C+   +  A E+ +++
Sbjct: 504 LQPSTSSYAHLIQKLCQLGSVQEAKEMWNDM 534



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 180/403 (44%), Gaps = 30/403 (7%)

Query: 123 YETCKFHEGIFLN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           Y +  FH+  F + L+K  +N  L    L  F  +       P   + +   + L+E+  
Sbjct: 118 YPSFNFHDPSFFSELLKQLNNVFLS---LRFFLWLSSQPEFLPHPVSCNKLFDALLEAKA 174

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA---FEVLKEMKKSQMSYPNL 238
              A++FL YS       P        I+  C+ G +E A   F++LKE        P +
Sbjct: 175 CVPAKSFL-YS---FEFSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYR----PYV 226

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEM----VSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            T++       K GR     +L+E M    V KD    D  T   LI  FC   KV RA 
Sbjct: 227 ETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKD---VDIETVGYLIQAFCNDNKVSRAY 283

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +I+     +G  P    +  L++GFCKE       E+   M      PD   Y  +IN F
Sbjct: 284 EILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGF 343

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GI 410
           C+     +A E+   +K+RG   D+V +  ++ G C+ G++E+A     KLW++    G 
Sbjct: 344 CKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDA----SKLWFEMIDKGF 399

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N+ SY  ++   C+ G L++A++L + ML  G+     + N L++ LC  G  ++A  
Sbjct: 400 LPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYD 459

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               +       +  ++  L++  CR  K+L + +LL EL  K
Sbjct: 460 FFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAK 502


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 250/547 (45%), Gaps = 69/547 (12%)

Query: 14  FSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEK 73
            SS  T S ++   +P ++  AN PK+          + A        HG  + L KC+ 
Sbjct: 24  LSSLFTHSPAVLSSNP-QISSANNPKS----------LHASPERISFQHGIPMFLHKCKT 72

Query: 74  EPQCALEI--FNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
                 +   F  +  +  F+ N      +L  LA+ + +  V ++ +QM +    + + 
Sbjct: 73  GSISVTQAHQFFDLMMRSIFSFNR-----LLAGLAKIEHYSQVFSLYKQM-HLAGLWPDL 126

Query: 132 IFLNLMKHFSNCSLH-ERVLEMFHKIHPITREK--PSLKAISTCL-NLLIESNQVDLAQN 187
           + LN++    NC  +  R+ E    +  I R    P +   +T +  L +E   ++  + 
Sbjct: 127 LTLNIL---INCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKL 183

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-----PNLITYS 242
           F++   Q L   PN   +  LIK  C  G +  A +  +EM      Y     PN+I+YS
Sbjct: 184 FMRM--QKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYS 241

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
            +IDGLCK G + EAI LF EMV +  + P+ +T++VLID  C+ G+V +AKK++E M  
Sbjct: 242 IIIDGLCKVGNWEEAICLFNEMVDQG-VQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300

Query: 303 NGCNPNVFNYTTLM-----------------------------------NGFCKEGKLQE 327
            G  PN+F YT+L+                                   NG+CK  K++E
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++F+EM +  + PD      L+     AG+VD+A EL + +K      D+    I L 
Sbjct: 361 AMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLD 420

Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           GLC+ G I EA+ +  +L    + L+  ++  +++  C+ G+LE A EL   +   G  P
Sbjct: 421 GLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQP 480

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                + ++   CK G  + A I    + E G  P+  ++++L+       KL    +LL
Sbjct: 481 DAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLL 540

Query: 508 DELVIKE 514
             ++ K+
Sbjct: 541 HRMIEKD 547



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 169/317 (53%), Gaps = 2/317 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++PN   F++LI   CK G +  A ++L+ M +  +  PNL TY++LI G C  G    A
Sbjct: 268 VQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGI-VPNLFTYTSLIKGFCLVGDLNSA 326

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF  M SK    PD ++YN+LI+G+C+  KV+ A K+   M + G  P+V     L+ 
Sbjct: 327 KELFVSMPSKGY-EPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLK 385

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
                GK+ +AKE+F  +K + +  D       ++  C+ G + EA++L  E++    K 
Sbjct: 386 ALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKL 445

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           DI TF  ++ GLC+ GK+E A  + EKL+ +GI  +  +Y  +++  C+KG+++KA  L 
Sbjct: 446 DIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILF 505

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
           + M   G  P   T + L+    ++   E     L  ++E    P+   +A++ +++C+ 
Sbjct: 506 QKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKD 565

Query: 498 RKLLFAFELLDELVIKE 514
            K     +LL    +++
Sbjct: 566 EKYKEWLDLLQRFFVQK 582



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 164/323 (50%), Gaps = 22/323 (6%)

Query: 211 HHCKRGTLE--SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           H CK G++    A +    M +S      + +++ L+ GL K   + +   L+++M    
Sbjct: 68  HKCKTGSISVTQAHQFFDLMMRS------IFSFNRLLAGLAKIEHYSQVFSLYKQM-HLA 120

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            + PD LT N+LI+  C   +++     M  +   G  P+V  +TTL+ G C E ++ EA
Sbjct: 121 GLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEA 180

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER------GCKADIVTF 382
            ++F  M+     P+ + Y TLI   C  G ++ AL+  +EM          C+ +++++
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISY 240

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           +II+ GLC+ G  EEA+ +  ++   G+  N  ++ ++++  C++G++ KA +LL +M+ 
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
            G +P+  T   L+   C  G    A      +   G++P+  S+ +L+   C+  K+  
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360

Query: 503 AFELLDELV-------IKESGTI 518
           A +L +E++       +K SG +
Sbjct: 361 AMKLFNEMLHVGMWPDVKTSGVL 383


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 213/476 (44%), Gaps = 51/476 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  ++ T+ E  G      T+ T+LD   +    E VD +  +M     +F E  +  L+
Sbjct: 259 ASAVYETMIEH-GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILI 317

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHL 196
             FS        +E   + H   R +          N LIE   +  L  +    +++ L
Sbjct: 318 NGFSKNG----KMEEARRFHGDMR-RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 372

Query: 197 R--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + P T  +NI I   C  G ++ A E+L     S M+ P++++Y+TL+ G  K G+F
Sbjct: 373 NAGIYPTTSTYNIYICALCDFGRIDDARELL-----SSMAAPDVVSYNTLMHGYIKMGKF 427

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA  LF+++ + D I P  +TYN LIDG C  G ++ A+++ E M      P+V  YTT
Sbjct: 428 VEASLLFDDLRAGD-IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 486

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+ GF K G L  A EV+DEM    +KPD   YTT      R G  D+A  L +EM    
Sbjct: 487 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 546

Query: 375 CKA-DIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-------------YLNKASYRIV 420
             A D+  +N+ + GLC+ G + +A+    K++  G+             YL    +++ 
Sbjct: 547 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 606

Query: 421 LNF----------------------SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
            N                         + G LE+A +    M  RG  P+  T N LL  
Sbjct: 607 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 666

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +CKAG  ++A   L  + E G  P   S+ +L+   C   K     +L  E++ KE
Sbjct: 667 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 722



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 38/309 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N LI   C+ G LE A + LKE   +Q+ +P++ITY+TL+ G  KNG    A
Sbjct: 442 IHPSIVTYNTLIDGLCESGNLEGA-QRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 500

Query: 258 IELF-----------------------------------EEMVSKDQILPDALTYNVLID 282
            E++                                   EEMV+ D   PD   YNV ID
Sbjct: 501 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 560

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ G + +A +    +   G  P+   YTT++ G+ + G+ + A+ ++DEM    L P
Sbjct: 561 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 620

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
             I Y  LI    +AGR+++A +   EMK+RG + +++T N +L G+C+ G I+EA   L
Sbjct: 621 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 680

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK- 461
            K+  +GI  NK SY ++++ +C   + E+ ++L + ML +   P   T   L   L K 
Sbjct: 681 CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 740

Query: 462 -AGMAEDAA 469
              MA D++
Sbjct: 741 HESMALDSS 749



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 7/284 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS++  +  L +L +S  ++ A    +   +H  + P    FN ++    K G LE   +
Sbjct: 238 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEH-GIMPTVITFNTMLDSCFKAGDLERVDK 296

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  EMK+  + +   +TY+ LI+G  KNG+  EA     +M  +        ++N LI+G
Sbjct: 297 IWLEMKRRNIEFSE-VTYNILINGFSKNGKMEEARRFHGDM-RRSGFAVTPYSFNPLIEG 354

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+ G  D A  + + M N G  P    Y   +   C  G++ +A+E+   M      PD
Sbjct: 355 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APD 410

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y TL++ + + G+  EA  L  +++       IVT+N ++ GLC  G +E A  + E
Sbjct: 411 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 470

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           ++    I+ +  +Y  ++    + G L  A E+   ML +G  P
Sbjct: 471 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 514



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 119/253 (47%), Gaps = 5/253 (1%)

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           FE+M+ K   LP     N+++        +++A  + E M  +G  P V  + T+++   
Sbjct: 228 FEKMIRKG-FLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 286

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G L+   +++ EMK   ++   + Y  LIN F + G+++EA     +M+  G      
Sbjct: 287 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 346

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           +FN ++ G C++G  ++A G+ +++   GIY   ++Y I +   C  G ++ A ELL  M
Sbjct: 347 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 406

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                 P   + N L+    K G   +A++    L      P   ++  L++ +C    L
Sbjct: 407 AA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 462

Query: 501 LFAFELLDELVIK 513
             A  L +E+  +
Sbjct: 463 EGAQRLKEEMTTQ 475



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 5/258 (1%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  ++E M+ +  I+P  +T+N ++D   + G ++R  KI   MK      +   Y  L
Sbjct: 258 KASAVYETMI-EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 316

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGF K GK++EA+    +M+          +  LI  +C+ G  D+A  +  EM   G 
Sbjct: 317 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 376

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
                T+NI +  LC  G+I++A  +L  +    +     SY  +++   + G+  +A  
Sbjct: 377 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDV----VSYNTLMHGYIKMGKFVEASL 432

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   +      P   T N L+  LC++G  E A      +      P+  ++  LV+   
Sbjct: 433 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 492

Query: 496 RGRKLLFAFELLDELVIK 513
           +   L  A E+ DE++ K
Sbjct: 493 KNGNLSMATEVYDEMLRK 510


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 225/483 (46%), Gaps = 62/483 (12%)

Query: 82  FNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-----------TCKFHE 130
           F  V       H+  +  T++  LA++K+F+    +L ++                + H+
Sbjct: 62  FKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHD 121

Query: 131 G------IFLNLMKHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLIESNQV 182
                  I   L+  ++N  + +  +++F   ++H     KP L A +  LN L ++   
Sbjct: 122 DPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGF---KPHLHACTVLLNSLAKARLT 178

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMK------------- 229
           ++     K     + + PN  IFN+LI   CK G +E A ++L EM+             
Sbjct: 179 NMVWKVYK-KMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNT 237

Query: 230 ------KSQMSY---------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
                 K  M Y               P+++TY++LI G C+ GR REA+ LF E+   +
Sbjct: 238 LISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI---N 294

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
              P+ +TY  LIDG+CR   ++ A ++ E M+  G +P V  Y +++   C+EGK+++A
Sbjct: 295 GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDA 354

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             + +EM    ++PD +   TLIN +C+ G +  A+++ K+M E G K D  TF  ++ G
Sbjct: 355 NRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHG 414

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
            C+  +++ A   L ++   G   + ++Y  +++    +   E  I L   +  +G    
Sbjct: 415 FCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVD 474

Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFELL 507
            +    L+ RLCK    E A   +F L++  G K +S  +  L     +  K + A ++L
Sbjct: 475 ISVYRALIRRLCKIDKIESAE-RIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDML 533

Query: 508 DEL 510
           DE+
Sbjct: 534 DEM 536



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 37/211 (17%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    +N +++  C+ G ++ A  +L EM + ++  P+ +T +TLI+  CK G    A
Sbjct: 331 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVE-PDNVTCNTLINAYCKIGDMGSA 389

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +++ ++M+    + PD  T+  LI GFC+  +VD AK+ +  M + G +P+   Y+ L++
Sbjct: 390 MKVKKKMLEAG-LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVD 448

Query: 318 GF-----------------------------------CKEGKLQEAKEVFDEMKNFLLKP 342
            +                                   CK  K++ A+ +F  M+   +K 
Sbjct: 449 SYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKG 508

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           D++ YT+L   + +AG+   A ++L EM +R
Sbjct: 509 DSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 539


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 197/364 (54%), Gaps = 4/364 (1%)

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           L++F ++       P  + +S  ++    +N +D +   L  +++    +     +N L+
Sbjct: 167 LQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE-FGCRVEAYAYNKLM 225

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
                RG +     + +   + ++  P++ +++ +I G+C+ G+ ++A+EL E M ++  
Sbjct: 226 SSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM-NEFG 284

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG-CNPNVFNYTTLMNGFCKEGKLQEA 328
             PD +T+N+++DG CR  +V R  +++  ++ +G C PNV  +T++++G+CK GKL++A
Sbjct: 285 CSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDA 344

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             V+++M    + P+T+ Y  LIN + + G +  A+E+ ++M    C  D+VTF+ ++ G
Sbjct: 345 MAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDG 404

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLMLCRGFLP 447
            CR G++++AL +   +    I  N  ++ I+++  C++   ++AI LL  L L     P
Sbjct: 405 YCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAP 464

Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
                N ++  LCK G  ++A +   G+ E G +P+  ++ +L+   C   ++  A    
Sbjct: 465 QAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFF 524

Query: 508 DELV 511
            E+V
Sbjct: 525 HEMV 528



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 195/391 (49%), Gaps = 3/391 (0%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL++F+ ++   G++ +    + ++         +A   +L + +   C+     +  LM
Sbjct: 166 ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLM 225

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                      V+ +F +        P + + +  +  +    QV  A   ++  N+   
Sbjct: 226 SSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNE-FG 284

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
             P+T   NI++   C+   +    EVL+ +++  +  PN++T++++I G CK G+  +A
Sbjct: 285 CSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDA 344

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + ++ +MV+   I+P+ +TYNVLI+G+ + G +  A ++ + M    C P+V  +++L++
Sbjct: 345 MAVYNDMVASG-IMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLID 403

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCK 376
           G+C+ G+L +A  ++ +M    ++P+   ++ +I+  C+  R DEA+ LL E+  R    
Sbjct: 404 GYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIA 463

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
                +N ++  LC+ GK++EA  + + +   G   +K +Y I++   C K  + +AI  
Sbjct: 464 PQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMF 523

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
              M+  G  P   T N  +  L KAGM  +
Sbjct: 524 FHEMVEAGCSPDSITVNCFISCLLKAGMPNE 554



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 154/287 (53%), Gaps = 2/287 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            P+   FN++IK  C+ G ++ A E+++ M +   S P+ +T++ ++DGLC+        
Sbjct: 251 SPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCS-PDTVTHNIIVDGLCRTNEVSRGH 309

Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
           E+   +      +P+ +T+  +I G+C+ GK++ A  +   M  +G  PN   Y  L+NG
Sbjct: 310 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 369

Query: 319 FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
           + K G L  A EV+ +M      PD + +++LI+ +CR G++D+AL +  +M +   + +
Sbjct: 370 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 429

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + TF+II+  LC++ + +EA+ +L +L     I      Y  V++  C+ G++++A  + 
Sbjct: 430 VYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIR 489

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           + M  +G  P   T   L++  C      +A +    +VE G  P+S
Sbjct: 490 KGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 536



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 145/295 (49%), Gaps = 3/295 (1%)

Query: 219 ESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
            SA  V   +  S +S  P+  +   +I  LC++GR  +A++LF++M +     PDA   
Sbjct: 127 SSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 186

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE-MK 336
           + L+        +D +  ++      GC    + Y  LM+     G++ +   +F+  ++
Sbjct: 187 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 246

Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           + +  PD   +  +I   CR G+V +ALEL++ M E GC  D VT NII+ GLCR  ++ 
Sbjct: 247 DRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVS 306

Query: 397 EALGMLEKLWYDGIYL-NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
               +L +L  DG+ + N  ++  V++  C+ G+LE A+ +   M+  G +P+  T N L
Sbjct: 307 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 366

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +    K G    A      +  +   P+  +++ L++  CR  +L  A  +  ++
Sbjct: 367 INGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDM 421



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 11/297 (3%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-TCKFHEGIFL 134
           Q ALE+   ++E  G + +  T+  I+D L R  +      VLR++  +  C  +   F 
Sbjct: 271 QKALELVERMNE-FGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFT 329

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES--NQVDLAQNFLKYS 192
           +++  +      E  + +++ +         +   +   N+LI       DL      Y 
Sbjct: 330 SVISGYCKAGKLEDAMAVYNDM-----VASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 384

Query: 193 NQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
               LR  P+   F+ LI  +C+ G L+ A  +  +M + ++  PN+ T+S +I  LCK 
Sbjct: 385 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQ-PNVYTFSIIIHSLCKQ 443

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
            R  EAI L  E+  +  I P A  YN +ID  C+ GKVD A  I + M+  GC P+ + 
Sbjct: 444 NRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYT 503

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           YT L+ G+C + ++ EA   F EM      PD+I     I+C  +AG  +E   +++
Sbjct: 504 YTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 560


>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 177/342 (51%), Gaps = 4/342 (1%)

Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
           ++ +   +      N+V  A   L+ S +   L P    FN LI   CK        E++
Sbjct: 227 IETVGYLIQAFCNDNKVSRAYEILRQSLED-GLTPCNDAFNKLISGFCKEKNHHRVLELV 285

Query: 226 KEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFC 285
             M     + P++ TY  +I+G CKN    +A E+F  +  +    PD + Y  LI GFC
Sbjct: 286 HTMIVKNRN-PDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYA-PDMVMYTTLIHGFC 343

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           + G+++ A K+   M + G  PN ++Y TL+ GFCK G L EA +++ +M +   K  T+
Sbjct: 344 KMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTL 403

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
              TLI   C  GR DEA +  +EM  +    D++T+N ++ G CREGK+ ++  +L++L
Sbjct: 404 SCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKEL 463

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
              G+  + +SY  ++   CQ G +++A E+   M  RG  P   T + ++  LC+ G  
Sbjct: 464 QAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYV 523

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVE-LICRGRKLLFAFEL 506
            +    L  +++   KP+ +++  L++ LI  G++LL   ++
Sbjct: 524 VEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKELLLELKM 565



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 139/271 (51%), Gaps = 1/271 (0%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T   LI   C + +   A E+  + + +D + P    +N LI GFC+     R  +++  
Sbjct: 229 TVGYLIQAFCNDNKVSRAYEILRQSL-EDGLTPCNDAFNKLISGFCKEKNHHRVLELVHT 287

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M     NP++F Y  ++NGFCK     +A EVF+ +K+    PD + YTTLI+ FC+ G+
Sbjct: 288 MIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQ 347

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           +++A +L  EM ++G   +  ++N ++ G C+ G ++EA+ + +K+   G      S   
Sbjct: 348 LEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNT 407

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++   C  G  ++A +  R M C+  +    T N L+   C+ G    +   L  L   G
Sbjct: 408 LILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKG 467

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDEL 510
            +P + S+A L++ +C+   +  A E+ +++
Sbjct: 468 LQPSTSSYAHLIQKLCQLGSVQEAKEMWNDM 498



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 180/403 (44%), Gaps = 30/403 (7%)

Query: 123 YETCKFHEGIFLN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
           Y +  FH+  F + L+K  +N  L    L  F  +       P   + +   + L+E+  
Sbjct: 82  YPSFNFHDPSFFSELLKQLNNVFLS---LRFFLWLSSQPEFLPHPVSCNKLFDALLEAKA 138

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA---FEVLKEMKKSQMSYPNL 238
              A++FL YS       P        I+  C+ G +E A   F++LKE        P +
Sbjct: 139 CVPAKSFL-YS---FEFSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYR----PYV 190

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEM----VSKDQILPDALTYNVLIDGFCRGGKVDRAK 294
            T++       K GR     +L+E M    V KD    D  T   LI  FC   KV RA 
Sbjct: 191 ETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKD---VDIETVGYLIQAFCNDNKVSRAY 247

Query: 295 KIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
           +I+     +G  P    +  L++GFCKE       E+   M      PD   Y  +IN F
Sbjct: 248 EILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGF 307

Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GI 410
           C+     +A E+   +K+RG   D+V +  ++ G C+ G++E+A     KLW++    G 
Sbjct: 308 CKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDA----SKLWFEMIDKGF 363

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N+ SY  ++   C+ G L++A++L + ML  G+     + N L++ LC  G  ++A  
Sbjct: 364 LPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYD 423

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               +       +  ++  L++  CR  K+L + +LL EL  K
Sbjct: 424 FFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAK 466


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 181/354 (51%), Gaps = 8/354 (2%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R  PS+   S  L  +          +  K  +    +  NT   NILI   C    L  
Sbjct: 5   RPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS-FGIPHNTYTLNILINSFCHLNRLGF 63

Query: 221 AFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           AF VL ++ K  + Y P+  T++TLI GLC  G+  EA++LF++M + +   PD LTY  
Sbjct: 64  AFSVLGDILK--LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM-TGEGFQPDVLTYGT 120

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
           LI+G C+  ++  A  +   M   G +PN F Y++L++G C  G  +EA  +F  M +  
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 340 LKPDTIGYTTLINCFCRAGRV---DEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
           + PD + + TL++  C+ G +   D+A+ L +EM ++G   D VT+N ++ GLC  G++ 
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
           +A+ +  ++   G   +  +YRI+ ++ C+   L +A+ LL+++      P     + ++
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 300

Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             +C+AG  E A      L   G  P+  ++ +++  +C+   L  A +L  E+
Sbjct: 301 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 181/346 (52%), Gaps = 13/346 (3%)

Query: 98  YATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIH 157
           ++ +L  + R K +  V ++ +QM       H    LN++ + S C L+ R+   F  + 
Sbjct: 13  FSKLLTSITRMKHYSTVLSLYKQMDSFGIP-HNTYTLNILIN-SFCHLN-RLGFAFSVLG 69

Query: 158 PITR--EKPSLKAISTCL-NLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
            I +   +PS    +T +  L +E    +  Q F K + +    +P+   +  LI   CK
Sbjct: 70  DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE--GFQPDVLTYGTLINGLCK 127

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
              L  A  +  +M    +S PN  TYS+LI GLC  G ++EAI LF  M+ + +I+PD 
Sbjct: 128 DRQLTEALSLFSDMLAKGIS-PNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR-KIMPDQ 185

Query: 275 LTYNVLIDGFCRGGKV---DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           LT+N L+D  C+ G +   D+A  + E M   G  P+   Y TL++G C  G+L++A  +
Sbjct: 186 LTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 245

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           F EM  +   PD + Y  L +  C+  R+ EA+ LLK ++      DI  ++I++ G+CR
Sbjct: 246 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 305

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            G++E A  +  KL   G++ +  +Y I++N  CQ+G L +A +L 
Sbjct: 306 AGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 351



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 7/320 (2%)

Query: 196 LRLKPNTCI--FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           LR++P   I  F+ L+    +     +   + K+M    + + N  T + LI+  C   R
Sbjct: 2   LRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPH-NTYTLNILINSFCHLNR 60

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
              A  +  +++ K    P   T+  LI G C  GK+  A ++ + M   G  P+V  Y 
Sbjct: 61  LGFAFSVLGDIL-KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           TL+NG CK+ +L EA  +F +M    + P+   Y++LI+  C  G   EA+ L   M  R
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179

Query: 374 GCKADIVTFNIILGGLCREGKIE---EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
               D +TFN ++  LC+EG I+   +A+G+ E++   G+  +  +Y  +++  C  G L
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
             AI L   M+  G +P   T   L   LCK     +A + L  +      P+   ++++
Sbjct: 240 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 299

Query: 491 VELICRGRKLLFAFELLDEL 510
           ++ +CR  +L  A +L  +L
Sbjct: 300 MDGMCRAGELEAARDLFSKL 319



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 5/187 (2%)

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRG---TLESAFEVLKEMKKSQMSYPNLITYSTLI 245
           L Y+  H ++ P+   FN L+   CK G    ++ A  + +EM + Q   P+ +TY+TLI
Sbjct: 172 LFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQ-QGLIPDTVTYNTLI 230

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
            GLC  GR R+AI LF EMV   QI PD +TY +L D  C+  ++  A  +++ ++    
Sbjct: 231 HGLCHVGRLRDAIALFHEMVVYGQI-PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 289

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
           +P++  Y+ +M+G C+ G+L+ A+++F ++ +  L PD   YT +IN  C+ G + EA +
Sbjct: 290 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 349

Query: 366 LLKEMKE 372
           L  EM E
Sbjct: 350 LFGEMDE 356



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 3/244 (1%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P  + ++ L+    R         + + M + G   N +    L+N FC   +L  A  V
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             ++     +P T  +TTLI   C  G++ EAL+L  +M   G + D++T+  ++ GLC+
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           + ++ EAL +   +   GI  N  +Y  +++  C  G  ++AI L   M+ R  +P   T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 452 SNELLVRLCKAGMAE--DAAIALF-GLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
            N L+  LCK GM +  D A+ LF  + + G  P++ ++  L+  +C   +L  A  L  
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 509 ELVI 512
           E+V+
Sbjct: 248 EMVV 251



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 2/104 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   + IL  + CK   L  A  +LK ++ + +  P++  YS ++DG+C+ G    A +
Sbjct: 256 PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLD-PDIHIYSIVMDGMCRAGELEAARD 314

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN 303
           LF ++ SK  + PD  TY ++I+G C+ G +  A K+   M  N
Sbjct: 315 LFSKLSSKG-LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN 357



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 86/178 (48%), Gaps = 6/178 (3%)

Query: 94  NNATYATILDKLARYKKFEAVD---AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVL 150
           +  T+ T++D L +    + +D    +  +M+ +        +  L+    +       +
Sbjct: 184 DQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 243

Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
            +FH++  +  + P L       + L +++++  A   LK   +   L P+  I++I++ 
Sbjct: 244 ALFHEM-VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI-EGTNLDPDIHIYSIVMD 301

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
             C+ G LE+A ++  ++    + +P++ TY+ +I+GLC+ G   EA +LF EM   D
Sbjct: 302 GMCRAGELEAARDLFSKLSSKGL-HPDVRTYTIMINGLCQQGLLAEASKLFGEMDEND 358



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%)

Query: 379 IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
           IV F+ +L  + R       L + +++   GI  N  +  I++N  C    L  A  +L 
Sbjct: 10  IVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLG 69

Query: 439 LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
            +L  G+ P  AT   L+  LC  G   +A      +   GF+P+  ++  L+  +C+ R
Sbjct: 70  DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDR 129

Query: 499 KLLFAFELLDELVIK 513
           +L  A  L  +++ K
Sbjct: 130 QLTEALSLFSDMLAK 144


>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 178/345 (51%), Gaps = 2/345 (0%)

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           T ++ L +  +V    N L+       + P+   +N+LI    K G  + A   L+E + 
Sbjct: 273 TVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEG 332

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
            +    + + YS ++   C NGR  EA E+  EM+SK    PD +TY+ ++DGFCR G++
Sbjct: 333 KRFRV-DQVGYSAIVHSFCLNGRMSEAKEIIGEMISKG-CRPDVVTYSAVVDGFCRIGEL 390

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D+A+K+M+ M  NGC PN   +T L+NG CK GK  EA E+ ++ +     P  I Y+ +
Sbjct: 391 DQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVI 450

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           ++ F R G++ E+ +++ +M ++G     V  N+++  LC+E K   A   +E+    G 
Sbjct: 451 MHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGC 510

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           ++N  ++  V++   ++G+LE A+ LL  M      P   T   ++  L + G  ++A  
Sbjct: 511 FINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATA 570

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
            +  ++  G  P   ++  ++   C    +     LLD+++ K+ 
Sbjct: 571 LVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQG 615



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 189/386 (48%), Gaps = 9/386 (2%)

Query: 79  LEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK 138
            E F     Q  + H    +  +L  L+R +  +    V+R M     +     F +LM 
Sbjct: 112 FEFFRWADRQWKYRHAPEVFDEMLALLSRTRLHDPARRVVRLMIRRGIRRGTRQFAHLML 171

Query: 139 HFSNCSLHE---RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
            +S         RVL++  K        P +   +  +N+L+ + +VD A  F +   + 
Sbjct: 172 SYSRAGKLRSAMRVLQLMQK----DGCAPDICICNVAVNVLVVAGRVDKALEFAERMRR- 226

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + + P+   +N LIK  C    +  A E++  M ++    P+ I+Y T++  LCK  R  
Sbjct: 227 VGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCP-PDKISYFTVMSFLCKEKRVA 285

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           E   L E M +   I PD +TYN+LI G  + G  D A   +   +      +   Y+ +
Sbjct: 286 EVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAI 345

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++ FC  G++ EAKE+  EM +   +PD + Y+ +++ FCR G +D+A +++K M + GC
Sbjct: 346 VHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGC 405

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           K + VT   +L GLC+ GK  EA  +L K   +    +  +Y ++++   ++G+L ++ +
Sbjct: 406 KPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCD 465

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCK 461
           ++  ML +GF P     N L+  LCK
Sbjct: 466 VVMQMLQKGFFPTAVEINLLIHALCK 491



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 198/452 (43%), Gaps = 56/452 (12%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           IS+   +S +  EK       +   +    G   +  TY  ++  LA++   +     LR
Sbjct: 269 ISYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLR 328

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLI 177
           +   +  +  +  +  ++  F    L+ R+ E    I  +  +  +P +   S  ++   
Sbjct: 329 ESEGKRFRVDQVGYSAIVHSFC---LNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFC 385

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
              ++D A+  +K+  ++   KPNT     L+   CK G    A+E+L + ++   + P+
Sbjct: 386 RIGELDQARKMMKHMYKN-GCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWT-PS 443

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            ITYS ++ G  + G+  E+ ++  +M+ K    P A+  N+LI   C+  K  RAK  M
Sbjct: 444 GITYSVIMHGFRREGKLVESCDVVMQMLQKG-FFPTAVEINLLIHALCKEQKPARAKDFM 502

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEG---------------------------------- 323
           E  ++ GC  NV N+TT+++GF ++G                                  
Sbjct: 503 EQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRK 562

Query: 324 -KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            K++EA  + ++M N  L P  + Y T+I+ +C  G V++ L LL +M  +  +     +
Sbjct: 563 GKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTK--QGFSSAY 620

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
           N ++  LC  GK+ EA  +L K+       +  +  I+++    +G   ++  +   M  
Sbjct: 621 NQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQ 680

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
           R  +P         ++LC+     D+ +AL G
Sbjct: 681 RNLIPD--------LKLCQ---KVDSQLALVG 701



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 15/190 (7%)

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           ++ K + A EVFDEM   L                R    D A  +++ M  RG +    
Sbjct: 120 RQWKYRHAPEVFDEMLALL---------------SRTRLHDPARRVVRLMIRRGIRRGTR 164

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            F  ++    R GK+  A+ +L+ +  DG   +     + +N     G ++KA+E    M
Sbjct: 165 QFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERM 224

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
              G  P   T N L+  LC A    +A   +  +++ G  P+  S+  ++  +C+ +++
Sbjct: 225 RRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRV 284

Query: 501 LFAFELLDEL 510
              + LL+ +
Sbjct: 285 AEVWNLLERM 294


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 209/447 (46%), Gaps = 29/447 (6%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G      T+  ++  L      +A   +  +M  + CK +E  F  L++ +    L ++ 
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
           LE+ + +       P+    +T ++      + D ++  ++   +   L P+   FN  I
Sbjct: 202 LELLNAMESFGV-LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE-GLVPDIVTFNSRI 259

Query: 210 KHHCKRGTLESAFEVLKEMKKSQ---MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
              CK G +  A  +  +M+  +   +  PN ITY+ ++ G CK G   +A  LFE +  
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            D  L    +YN+ + G  R GK   A+ +++ M + G  P++++Y  LM+G CK G L 
Sbjct: 320 NDD-LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS 378

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +AK +   MK   + PD + Y  L++ +C  G+VD A  LL+EM    C  +  T NI+L
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF- 445
             L + G+I EA  +L K+   G  L+  +  I+++  C  GEL+KAIE+++ M   G  
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498

Query: 446 ----------------------LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
                                 LP   T + LL  LCKAG   +A      ++    +P+
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558

Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
           S ++ + +   C+  K+  AF +L ++
Sbjct: 559 SVAYNIFIHHFCKQGKISSAFRVLKDM 585



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 172/335 (51%), Gaps = 26/335 (7%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +  L+  +C  G +++A  +L+EM ++    PN  T + L+  L K GR  EA E
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWKMGRISEAEE 452

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK------------------ 301
           L  +M  K   L D +T N+++DG C  G++D+A +I++ M+                  
Sbjct: 453 LLRKMNEKGYGL-DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511

Query: 302 -----NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
                 N C P++  Y+TL+NG CK G+  EAK +F EM    L+PD++ Y   I+ FC+
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK 571

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++  A  +LK+M+++GC   + T+N ++ GL  + +I E  G+++++   GI  N  +
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICT 631

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y   + + C+  ++E A  LL  M+ +   P+  +   L+   CK    + A       V
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            +  + E     +  EL+  G+ LL A ELL+ ++
Sbjct: 692 SICGQKEGLYSLMFNELLAAGQ-LLKATELLEAVL 725



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 224/464 (48%), Gaps = 22/464 (4%)

Query: 67  SLIKCEKEPQCALEIFNTV-----SEQKGFNHN-NATYATILDKLARYKKFEAVDAVLRQ 120
           +L+K    P+ A  IF  +      E  G + +   T A IL +   +++ + +  ++  
Sbjct: 8   ALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILS 67

Query: 121 MTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP-ITREKPSLKAISTCLNLLIES 179
            + +  K      L+++  F+  +  ++    F  +       KPS+       NLL+ES
Sbjct: 68  SSIQKTKLSS--LLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSV----YLYNLLLES 121

Query: 180 NQVDLAQNFLKYSNQHLRL---KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
              +    F+ +  + + L    P T  FN+LI+  C    +++A E+  EM +     P
Sbjct: 122 CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCK-P 180

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           N  T+  L+ G CK G   + +EL   M S   +LP+ + YN ++  FCR G+ D ++K+
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNAMESFG-VLPNKVIYNTIVSSFCREGRNDDSEKM 239

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN----FLLKPDTIGYTTLIN 352
           +E M+  G  P++  + + ++  CKEGK+ +A  +F +M+      L +P++I Y  ++ 
Sbjct: 240 VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FC+ G +++A  L + ++E    A + ++NI L GL R GK  EA  +L+++   GI  
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +  SY I+++  C+ G L  A  ++ LM   G  P   T   LL   C  G  + A   L
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
             ++     P + +  +L+  + +  ++  A ELL ++  K  G
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 177/373 (47%), Gaps = 60/373 (16%)

Query: 199 KPNTCIFNILIKHHCKRGTLESA---FE-------------------------------- 223
           +PN+  +N+++K  CK G LE A   FE                                
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           VLK+M    +  P++ +Y+ L+DGLCK G   +A  +   ++ ++ + PDA+TY  L+ G
Sbjct: 348 VLKQMTDKGIG-PSIYSYNILMDGLCKLGMLSDAKTIVG-LMKRNGVCPDAVTYGCLLHG 405

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C  GKVD AK +++ M  N C PN +    L++   K G++ EA+E+  +M       D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERG-----------------------CKADIV 380
           T+    +++  C +G +D+A+E++K M+  G                       C  D++
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           T++ +L GLC+ G+  EA  +  ++  + +  +  +Y I ++  C++G++  A  +L+ M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
             +G      T N L++ L       +    +  + E G  P   ++   ++ +C G K+
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645

Query: 501 LFAFELLDELVIK 513
             A  LLDE++ K
Sbjct: 646 EDATNLLDEMMQK 658



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 209/484 (43%), Gaps = 112/484 (23%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMT--------YETCKFHEGI-----------FLNLM 137
           +Y   L  L R+ KF   + VL+QMT        Y      +G+            + LM
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387

Query: 138 KHFSNCS---LHERVLEMFHKIHPITREKPSLKAI--STCL------NLLIES----NQV 182
           K    C     +  +L  +  +  +   K  L+ +  + CL      N+L+ S     ++
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447

Query: 183 DLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM-------- 233
             A+  L+  N+    L   TC  NI++   C  G L+ A E++K M+            
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTC--NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505

Query: 234 SY--------------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
           SY              P+LITYSTL++GLCK GRF EA  LF EM+  +++ PD++ YN+
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG-EKLQPDSVAYNI 564

Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
            I  FC+ GK+  A ++++ M+  GC+ ++  Y +L+ G   + ++ E   + DEMK   
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624

Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR-------- 391
           + P+   Y T I   C   +V++A  LL EM ++    ++ +F  ++   C+        
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684

Query: 392 --------------------------EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
                                      G++ +A  +LE +   G  L    Y+ ++   C
Sbjct: 685 EVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLC 744

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF-GLVEMGFKPES 484
           +K ELE A  +L  M+ RG+                 G    A + +  GL +MG K E+
Sbjct: 745 KKDELEVASGILHKMIDRGY-----------------GFDPAALMPVIDGLGKMGNKKEA 787

Query: 485 DSWA 488
           +S+A
Sbjct: 788 NSFA 791


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 175/337 (51%), Gaps = 11/337 (3%)

Query: 133 FLNLMKHFSNCSLHERVLEMFH-KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           F +++  +S   L ++  E +   +H      PS     TC +LL+  +     Q   + 
Sbjct: 479 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS-----TCSSLLMGLSINGRLQEATEL 533

Query: 192 SNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
             Q +   L  N   F +L+    KRG +  A  +  EM++  + +P+++ +S  IDGL 
Sbjct: 534 IGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI-FPDVVAFSAFIDGLS 592

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           K G   EA  +F EM+ K  ++P+   YN LI GFC+ GK++ A K+ + M++ G  P++
Sbjct: 593 KQGLVEEAYNVFLEMLRKG-LIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDI 651

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
           F    ++ G CK+G+++ A  VF +M    L PD I Y TLIN +C+A  +  A  L+  
Sbjct: 652 FTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNR 711

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M   G   D+ T+NI + G C   ++  A+ ML++L   GI  N  +Y  +LN  C    
Sbjct: 712 MYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD-I 770

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
           L++A+ L   +L   F+P+  T+N LL +  K GM E
Sbjct: 771 LDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPE 807



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 216/455 (47%), Gaps = 20/455 (4%)

Query: 41  DPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYAT 100
           +P V T +T ++A     F   G  +           A ++F+ + E  GF+ N   Y T
Sbjct: 333 NPTVVTFNTVINA-----FCKEGNVVE----------ARKLFDGLKEM-GFSPNAIMYNT 376

Query: 101 ILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPIT 160
           +++   + ++ +  + +  +M  +     +GI  N++         E   +   K   + 
Sbjct: 377 LMNGYVKMREIDQANMLYEEMRKKGIA-PDGITFNILVSGHYKYGREEDGDRLLKDISVL 435

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
              P        ++ L  + ++D A  FL    +   L P+   FN +I  + + G  + 
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEK-GLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           AFE  K M    ++ P+  T S+L+ GL  NGR +EA EL  +M+ K  +  + + + VL
Sbjct: 495 AFEAYKLMVHFGLT-PSPSTCSSLLMGLSINGRLQEATELIGQMIEKG-LSVNNMAFTVL 552

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           +D F + G V  A+ +   M+  G  P+V  ++  ++G  K+G ++EA  VF EM    L
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            P+   Y +LI  FC+ G+++EAL+L K M+ RG   DI T N+I+GGLC++G++  A+ 
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           +   +   G+  +  +Y  ++N  C+  ++  A  L+  M   G  P   T N  +   C
Sbjct: 673 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 732

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
            +     A + L  LV  G  P + ++  ++  +C
Sbjct: 733 SSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC 767



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 180/360 (50%), Gaps = 8/360 (2%)

Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
           +LM+ F N  +  + LE+  ++  +   +PS   ++    LL+   +V    N  K    
Sbjct: 201 SLMRAFVNAEMGFQALEILGRMREVG-VRPSASGVAILFKLLL---RVGDYGNVWKLFKD 256

Query: 195 HLRLKPNTC--IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
            +R  P  C   F+ +I   C++G +     +L  M K     PN   Y+ +I+  C  G
Sbjct: 257 VIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCE-PNAFAYNIVINACCIRG 315

Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
           R  +A+  F  M+ +    P  +T+N +I+ FC+ G V  A+K+ + +K  G +PN   Y
Sbjct: 316 RTSDALAWFNLMIERG-CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
            TLMNG+ K  ++ +A  +++EM+   + PD I +  L++   + GR ++   LLK++  
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
            G   D   F+I + GLC  G+++EA+  L  +   G+  +  ++  V+    Q G  +K
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           A E  +LM+  G  P  +T + LL+ L   G  ++A   +  ++E G    + ++ +L++
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 175/352 (49%), Gaps = 3/352 (0%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           P+    +T +N  ++  ++D A N L    +   + P+   FNIL+  H K G  E    
Sbjct: 369 PNAIMYNTLMNGYVKMREIDQA-NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDR 427

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +LK++    +  P+   +   + GLC  GR  EA+E   +M+ K  + P  + +N +I  
Sbjct: 428 LLKDISVLGL-LPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKG-LSPSIIAFNSVIAA 485

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           + + G  D+A +  + M + G  P+    ++L+ G    G+LQEA E+  +M    L  +
Sbjct: 486 YSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVN 545

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + +T L++ F + G V  A  L  EM+ RG   D+V F+  + GL ++G +EEA  +  
Sbjct: 546 NMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFL 605

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
           ++   G+  N  +Y  ++   C+ G+L +A++L ++M  RG LP   T+N ++  LCK G
Sbjct: 606 EMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQG 665

Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
               A      + + G  P+  ++  L+   C+   ++ A  L++ +    S
Sbjct: 666 RMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGS 717



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 4/317 (1%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           ++P+     IL K   + G   + +++ K++ + +   P   T+S +I G C+ G     
Sbjct: 227 VRPSASGVAILFKLLLRVGDYGNVWKLFKDVIR-RGPQPCKYTFSGIILGFCRKGCIHLG 285

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L   M  K    P+A  YN++I+  C  G+   A      M   GCNP V  + T++N
Sbjct: 286 ESLLHLM-PKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVIN 344

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            FCKEG + EA+++FD +K     P+ I Y TL+N + +   +D+A  L +EM+++G   
Sbjct: 345 AFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAP 404

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D +TFNI++ G  + G+ E+   +L+ +   G+  +++ + I ++  C  G L++A+E L
Sbjct: 405 DGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFL 464

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE-SDSWALLVELICR 496
             ML +G  P     N ++    +AG+ + A  A   +V  G  P  S   +LL+ L   
Sbjct: 465 MDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSIN 524

Query: 497 GRKLLFAFELLDELVIK 513
           GR L  A EL+ +++ K
Sbjct: 525 GR-LQEATELIGQMIEK 540



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 161/346 (46%), Gaps = 43/346 (12%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           Q A E+   + E KG + NN  +  +LDK      F+  D V  Q  +   +   GIF  
Sbjct: 528 QEATELIGQMIE-KGLSVNNMAFTVLLDKF-----FKRGDVVGAQSLWGEME-RRGIF-- 578

Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQ 194
                                       P + A S  ++ L +   V+ A N FL+   +
Sbjct: 579 ----------------------------PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK 610

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            L   PN   +N LI   CK G L  A ++ K M+   +  P++ T + +I GLCK GR 
Sbjct: 611 GL--IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL-LPDIFTTNMIIGGLCKQGRM 667

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
           R AI +F +M  +  + PD +TYN LI+G+C+   +  A  ++  M  +G NP++  Y  
Sbjct: 668 RSAINVFMDM-HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 726

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            ++GFC   ++  A  + DE+ +  + P+T+ Y +++N  C +  +D A+ L   + +  
Sbjct: 727 RIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC-SDILDRAMILTARLLKMA 785

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
              ++VT N++L    ++G  E  L    KL       ++ +Y+I+
Sbjct: 786 FVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIM 831


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 184/354 (51%), Gaps = 6/354 (1%)

Query: 163 KPSLKAISTCLNLLIE----SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
           K  LK      N+L++    + + D A N L +    L ++P+T  ++ ++K  C+    
Sbjct: 147 KTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRS 206

Query: 219 ESAFEVLKEM-KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
           + A ++L  M KKS    PN+++Y+T+I G  + G   +A  LF EM+ +  ++PD +TY
Sbjct: 207 QRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQG-VVPDVVTY 265

Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
           +  ID  C+   +D+A+ ++  M +NG  P+   Y  +++G+   G+ +E   +F EM  
Sbjct: 266 SSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR 325

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
             L PD     + ++  C+ G+  EA E    M  +G K D+VT++++L G   EG + +
Sbjct: 326 RGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVD 385

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
            L +   +  +GI  + + Y I+++   ++G +++A+ +   M  RG +P   T   ++ 
Sbjct: 386 MLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIA 445

Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              + G   DA      ++ MG KP++  +  L++  C    L+ A EL+ E++
Sbjct: 446 AFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMM 499



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 162/290 (55%), Gaps = 3/290 (1%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           + LKP+T ++N LI+  C  G L  A E++ EM    +  PN + ++++I+ LCK GR  
Sbjct: 466 MGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVV 525

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA ++F+ ++   +  PD +T+N LIDG+   GK+++A  +++ M + G  P+V  Y+ L
Sbjct: 526 EAQDIFDLVIHIGE-RPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSAL 584

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G+C+ G++ +   +F EM +  +KP TI Y  +++     GR   A ++  EM E G 
Sbjct: 585 LDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGT 644

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             DI T  IILGGLCR    +EA+ + +KL    +  N A    +++   +  + E+A E
Sbjct: 645 TMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANE 704

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPES 484
           L   +   G +P+ +T   ++  L K G  E+A   +F L+E  G  P S
Sbjct: 705 LFDSISATGLVPNASTYGVMITNLLKEGSVEEAD-NMFSLMEKSGCAPSS 753



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 207/440 (47%), Gaps = 10/440 (2%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S+   I     E E   A  +F+ + +Q G   +  TY++ +D L + +  +  + VLR
Sbjct: 228 VSYNTVIHGFFREGEVSKACNLFHEMMQQ-GVVPDVVTYSSYIDALCKARAMDKAELVLR 286

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLI 177
           QM     +  +  +  ++  +S     +    MF ++   TR    P +   ++ ++ L 
Sbjct: 287 QMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM---TRRGLMPDIFTCNSYMSSLC 343

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +  +   A  F   S      KP+   +++L+  +   G +     +   M+ + +   +
Sbjct: 344 KHGKSKEAAEFFD-SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADH 402

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            + Y+ LID   K G   EA+ +F +M  +  ++PDA TY  +I  F R G++  A    
Sbjct: 403 SV-YNILIDAYGKRGMMDEAMLIFTQMQERG-VMPDAWTYGTVIAAFSRMGRLADAMDKF 460

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCR 356
             M   G  P+   Y +L+ GFC  G L +AKE+  EM    + +P+T+ + ++IN  C+
Sbjct: 461 NQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCK 520

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            GRV EA ++   +   G + D++TFN ++ G    GK+E+A G+L+ +   GI  +  +
Sbjct: 521 EGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVT 580

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +L+  C+ G ++  + L R ML +G  P   T   +L  L   G    A      ++
Sbjct: 581 YSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMI 640

Query: 477 EMGFKPESDSWALLVELICR 496
           E G   +  +  +++  +CR
Sbjct: 641 ESGTTMDISTCGIILGGLCR 660



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 213/454 (46%), Gaps = 14/454 (3%)

Query: 68  LIKC---EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
           L+KC    K    A+ +      + G   +  +Y+T+L  L    + +    +L  M  +
Sbjct: 160 LLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKK 219

Query: 125 T--CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
           +  C  +   +  ++  F       +   +FH++       P +   S+ ++ L ++  +
Sbjct: 220 SGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQ-QGVVPDVVTYSSYIDALCKARAM 278

Query: 183 DLAQNFLK--YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           D A+  L+   SN     +P+   +N +I  +   G  +    + +EM +  +  P++ T
Sbjct: 279 DKAELVLRQMISNG---FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL-MPDIFT 334

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
            ++ +  LCK+G+ +EA E F+ M +K    PD +TY+VL+ G+   G V     +   M
Sbjct: 335 CNSYMSSLCKHGKSKEAAEFFDSMAAKGH-KPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           + NG   +   Y  L++ + K G + EA  +F +M+   + PD   Y T+I  F R GR+
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRL 453

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-YLNKASYRI 419
            +A++   +M   G K D + +N ++ G C  G + +A  ++ ++   GI   N   +  
Sbjct: 454 ADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNS 513

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
           ++N  C++G + +A ++  L++  G  P   T N L+      G  E A   L  ++ +G
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            +P+  +++ L++  CR  ++     L  E++ K
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK 607



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 12/360 (3%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+ IF T  +++G   +  TY T++   +R  +         QM     K    ++ +L+
Sbjct: 421 AMLIF-TQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLI 479

Query: 138 K----HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
           +    H +     E + EM  +  P    +P+    ++ +N L +  +V  AQ+      
Sbjct: 480 QGFCMHGNLVKAKELISEMMSRGIP----RPNTVFFNSIINSLCKEGRVVEAQDIFDLV- 534

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
            H+  +P+   FN LI  +   G +E AF VL  M    +  P+++TYS L+DG C+NGR
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIE-PDVVTYSALLDGYCRNGR 593

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             + + LF EM+SK  + P  +TY +++ G    G+   AKK+   M  +G   ++    
Sbjct: 594 IDDGLILFREMLSKG-VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCG 652

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            ++ G C+     EA  +F ++    +K +     T+I+   +  + +EA EL   +   
Sbjct: 653 IILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISAT 712

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   +  T+ +++  L +EG +EEA  M   +   G   +      ++    +KGE+ KA
Sbjct: 713 GLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKA 772



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 8/272 (2%)

Query: 249 CKNGRFREAIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           C++G    A+ LF  +  ++      LP   TYN+L+D  CR  +      +       G
Sbjct: 91  CRDGP-SLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTG 149

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
              +V     L+   C   +  +A  V    M    ++PDTI Y+T++   C   R   A
Sbjct: 150 LKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRA 209

Query: 364 LELLKEM--KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
           L+LL  M  K  GC  ++V++N ++ G  REG++ +A  +  ++   G+  +  +Y   +
Sbjct: 210 LDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYI 269

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+   ++KA  +LR M+  GF P   T N ++      G  ++ A     +   G  
Sbjct: 270 DALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLM 329

Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
           P+  +    +  +C+  K   A E  D +  K
Sbjct: 330 PDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAK 361



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 2/209 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           +KP T  + I++      G    A ++  EM +S  +  ++ T   ++ GLC+N    EA
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM-DISTCGIILGGLCRNNCDDEA 667

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           I LF+++ + +     A+  N +ID   +  K + A ++ + +   G  PN   Y  ++ 
Sbjct: 668 IALFKKLGAMNVKFNIAII-NTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMIT 726

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              KEG ++EA  +F  M+     P +     +I      G + +A   L ++  +    
Sbjct: 727 NLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISL 786

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLW 406
           +  T +++L    R+GK  E +  L  ++
Sbjct: 787 EASTASLMLSLFSRKGKYREQIKSLPAMY 815



 Score = 38.5 bits (88), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA-IALFG 474
           +Y I+++  C+         L    L  G       +N LL  LC A  ++DA  + L  
Sbjct: 121 TYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHR 180

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           + E+G +P++ S++ +++ +C   +   A +LL  +V K  G
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGG 222


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 203/424 (47%), Gaps = 4/424 (0%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   N  TY   +  L R  K +    ++++M  + C      +  L+         
Sbjct: 256 ESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKL 315

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           +  + +F K+   +  KP      T L+   +   +D  +       +     P+   F 
Sbjct: 316 DDAMCLFTKMKS-SSHKPDKVTYVTLLDKFSDCGHLDKVEKIWT-EMEADGYAPDVVTFT 373

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           IL+   CK G +  AF++L  M+K Q   PNL TY+TLI GL +  R  +A++LF  M S
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRK-QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
              + P A TY +LID   + G   +A +  E MK  G  PN+      +    + G+L 
Sbjct: 433 LG-VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLG 491

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           EAK +F+E+K+  L PD++ Y  ++ C+ + G+VDEA++LL EM +  C+ D++  N ++
Sbjct: 492 EAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLI 551

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
             L + G++EEA  M  ++    +     +Y I+L    ++G+++KA++L   M   G  
Sbjct: 552 DTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCS 611

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+  T N LL  LCK    + A    + +  M  +P+  ++  ++    +  ++  A  L
Sbjct: 612 PNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWL 671

Query: 507 LDEL 510
             ++
Sbjct: 672 FHQM 675



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 177/320 (55%), Gaps = 4/320 (1%)

Query: 173  LNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
            + +L +  +  +A+N F+K++ + L +KP   ++N+LI    +   +E A+ + +EMK +
Sbjct: 761  IKVLCKHKKTSVARNVFVKFTKE-LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 232  QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
              + P+  TY++LID   K+G+  E  +L++EM+++    P+ +TYN++I    +  ++D
Sbjct: 820  GCA-PDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG-CKPNTITYNMVISNLVKSNRLD 877

Query: 292  RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
            +A  +   + +   +P    +  L++G  K G+L +A E+FD M ++  +P++  Y  L+
Sbjct: 878  KAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILV 937

Query: 352  NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
            N + + G VD A E  K M + G + D+ ++ I++  LC  G++++AL   EKL   G+ 
Sbjct: 938  NGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997

Query: 412  LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
             +  +Y +++N   +    E+A+ L   M  RG +P   T N L++ L   GM E+A   
Sbjct: 998  PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057

Query: 472  LFGLVEMGFKPESDSWALLV 491
               L  +G KP   ++  L+
Sbjct: 1058 YEELQFIGLKPNVFTYNALI 1077



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 165/313 (52%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP+   F+ L+    KR  +++   +L+EM+   +  PN+ TY+  I  L ++G+  EA
Sbjct: 225 LKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLR-PNIYTYTICIRVLGRDGKIDEA 283

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             + + M   D   PD +TY VLID  C   K+D A  +   MK++   P+   Y TL++
Sbjct: 284 YRIMKRM-DDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLD 342

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            F   G L + ++++ EM+     PD + +T L+N  C+AGR++EA +LL  M+++G   
Sbjct: 343 KFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLP 402

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           ++ T+N ++ GL R  ++++AL +   +   G+     +Y +++++  + G   KA+E  
Sbjct: 403 NLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETF 462

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  RG  P+    N  L  L + G   +A      L   G  P+S ++ ++++   + 
Sbjct: 463 EKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKV 522

Query: 498 RKLLFAFELLDEL 510
            ++  A +LL E+
Sbjct: 523 GQVDEAIKLLSEM 535



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 2/257 (0%)

Query: 199  KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
            KPNT  +N++I +  K   L+ A ++   +     S P   T+  LIDGL K+GR  +A 
Sbjct: 857  KPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFS-PTPCTFGPLIDGLLKSGRLDDAH 915

Query: 259  ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
            E+F+ MV      P++  YN+L++G+ + G VD A +  + M   G  P++ +YT L++ 
Sbjct: 916  EMFDGMVHYG-CRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDI 974

Query: 319  FCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
             C  G++ +A   F+++K   L PD + Y  +IN   R+ R +EAL L  EM+ RG   D
Sbjct: 975  LCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPD 1034

Query: 379  IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
            + T+N ++  L   G IEEA  + E+L + G+  N  +Y  ++      G  E A  + +
Sbjct: 1035 LYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYK 1094

Query: 439  LMLCRGFLPHYATSNEL 455
             M+  G  P+  T  +L
Sbjct: 1095 KMMVGGCDPNTGTFAQL 1111



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 210/445 (47%), Gaps = 16/445 (3%)

Query: 72   EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
            E + Q A+++F +++   G + N  T+ T+LD L +  + +    +  +MT   C+    
Sbjct: 592  EGQIQKAVQLFESMNGH-GCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVL 650

Query: 132  IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVD----LAQN 187
             F  ++  F   +  +  + +FH++  + R  P    + T L  +I+S Q++    + ++
Sbjct: 651  TFNTIIHGFIKQNQIKNAIWLFHQMKKLLR--PDHVTLCTLLPGVIKSGQIEDAFRITED 708

Query: 188  FLKYSNQHL-RLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-KKSQMSYPNLITYSTLI 245
            F      ++ R      +  IL +   ++  L     V + + K   +  P       +I
Sbjct: 709  FFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIP-------II 761

Query: 246  DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
              LCK+ +   A  +F +   +  + P    YN+LIDGF     V+ A  + E MK+ GC
Sbjct: 762  KVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGC 821

Query: 306  NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
             P+ F Y +L++   K GK+ E  +++DEM     KP+TI Y  +I+   ++ R+D+A++
Sbjct: 822  APDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD 881

Query: 366  LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
            L   +          TF  ++ GL + G++++A  M + + + G   N A Y I++N   
Sbjct: 882  LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYG 941

Query: 426  QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
            + G ++ A E  + M+  G  P   +   L+  LC AG  +DA      L + G  P+  
Sbjct: 942  KLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLV 1001

Query: 486  SWALLVELICRGRKLLFAFELLDEL 510
            ++ L++  + R ++   A  L  E+
Sbjct: 1002 AYNLMINGLGRSQRTEEALSLFHEM 1026



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 167/363 (46%), Gaps = 9/363 (2%)

Query: 66   ISLIKC---EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT 122
            I +IK     K+   A  +F   +++ G       Y  ++D        E    +  +M 
Sbjct: 758  IPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMK 817

Query: 123  YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQ 181
               C      + +L+           + +++ ++  +TR  KP+    +  ++ L++SN+
Sbjct: 818  SAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEM--LTRGCKPNTITYNMVISNLVKSNR 875

Query: 182  VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
            +D A + L Y+       P  C F  LI    K G L+ A E+   M       PN   Y
Sbjct: 876  LDKAMD-LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR-PNSAIY 933

Query: 242  STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
            + L++G  K G    A E F+ MV K+ I PD  +Y +L+D  C  G+VD A    E +K
Sbjct: 934  NILVNGYGKLGHVDTACEFFKRMV-KEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK 992

Query: 302  NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
              G +P++  Y  ++NG  +  + +EA  +F EM+N  + PD   Y +LI      G ++
Sbjct: 993  QAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIE 1052

Query: 362  EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            EA ++ +E++  G K ++ T+N ++ G    G  E A G+ +K+   G   N  ++  + 
Sbjct: 1053 EAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLP 1112

Query: 422  NFS 424
            N S
Sbjct: 1113 NQS 1115



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 36/301 (11%)

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
           ++ + Q+   N+ TY  +   L   G  R+A    E+M     +L +A +YN LI    +
Sbjct: 148 DLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVL-NAYSYNGLIHFLLQ 206

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
            G    A ++   M + G  P++  ++ LM    K   ++    + +EM++  L+P+   
Sbjct: 207 SGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYT 266

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA-------- 398
           YT  I    R G++DEA  ++K M + GC  D+VT+ +++  LC   K+++A        
Sbjct: 267 YTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMK 326

Query: 399 -----------------------LGMLEKLWY----DGIYLNKASYRIVLNFSCQKGELE 431
                                  L  +EK+W     DG   +  ++ I++N  C+ G + 
Sbjct: 327 SSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRIN 386

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
           +A +LL  M  +G LP+  T N L+  L +A   +DA      +  +G +P + ++ LL+
Sbjct: 387 EAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLI 446

Query: 492 E 492
           +
Sbjct: 447 D 447



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/508 (21%), Positives = 216/508 (42%), Gaps = 82/508 (16%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A ++ +T+ +Q G   N  TY T++  L R  + +    +   M     +     ++ L+
Sbjct: 388 AFDLLDTMRKQ-GVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLI 446

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ---NFLKYSNQ 194
            +        + LE F K+       P++ A +  L  L E  ++  A+   N LK S  
Sbjct: 447 DYHGKSGHPGKALETFEKMKA-RGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG- 504

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS-------------------- 234
              L P++  +N+++K + K G ++ A ++L EM K Q                      
Sbjct: 505 ---LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVE 561

Query: 235 --------------YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
                          P ++TY+ L+ GL K G+ ++A++LFE M +     P+ +T+N L
Sbjct: 562 EAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM-NGHGCSPNTITFNTL 620

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           +D  C+  +VD A K+   M    C P+V  + T+++GF K+ +++ A  +F +MK  LL
Sbjct: 621 LDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKK-LL 679

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEM-KERGCKADIVTFNIILGGLCREGKIEEAL 399
           +PD +   TL+    ++G++++A  + ++   + G   D   +  ++GG+  E   E+A+
Sbjct: 680 RPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI 739

Query: 400 GMLEKLWYDGIYLNKAS------------------------------------YRIVLNF 423
              E+L    I  + +                                     Y ++++ 
Sbjct: 740 LFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDG 799

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
             +   +E A  L   M   G  P   T N L+    K+G   +       ++  G KP 
Sbjct: 800 FLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPN 859

Query: 484 SDSWALLVELICRGRKLLFAFELLDELV 511
           + ++ +++  + +  +L  A +L   LV
Sbjct: 860 TITYNMVISNLVKSNRLDKAMDLYYNLV 887



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 91/204 (44%)

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           +V+    + + M+      NV  Y  +       G L++A    ++M+      +   Y 
Sbjct: 139 RVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LI+   ++G   EALE+ + M   G K  + TF+ ++    +   I+  +G+LE++   
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM 258

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G+  N  +Y I +    + G++++A  +++ M   G  P   T   L+  LC A   +DA
Sbjct: 259 GLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDA 318

Query: 469 AIALFGLVEMGFKPESDSWALLVE 492
                 +     KP+  ++  L++
Sbjct: 319 MCLFTKMKSSSHKPDKVTYVTLLD 342



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 73/152 (48%)

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
           RV++   +   M+ +  + ++ T+ II   L   G + +A   LEK+   G  LN  SY 
Sbjct: 139 RVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198

Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
            +++F  Q G  ++A+E+ R M+  G  P   T + L+V   K    +     L  +  M
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM 258

Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           G +P   ++ + + ++ R  K+  A+ ++  +
Sbjct: 259 GLRPNIYTYTICIRVLGRDGKIDEAYRIMKRM 290


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 157/297 (52%), Gaps = 2/297 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L +KPN  I+ I I+  C+   +E A E + E+ K     PNL TYS +IDG CK G  R
Sbjct: 262 LGVKPNVYIYTIYIRDLCRENKMEEA-EKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLR 320

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  L++E++   ++LP+ + +  L+DGFC+  ++  A+ +   M   G +PN++ Y  L
Sbjct: 321 QAYGLYKEILVA-ELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCL 379

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           ++G CK G + EA  +  EM++  L PD   YT LIN  C   R+ EA  L + MK    
Sbjct: 380 IHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERI 439

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
               VT+N ++ G C+E  IE+AL +  ++   G+  N  ++  +++  C+   ++ A+ 
Sbjct: 440 FPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMG 499

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           L   M  +G +P   T   L+    K    ++A      ++E G  P   ++A LV+
Sbjct: 500 LYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 556



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 164/306 (53%), Gaps = 3/306 (0%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           KP++   +  +  L   N+++ A+   +    H  + PN   ++ +I  +CK G L  A+
Sbjct: 265 KPNVYIYTIYIRDLCRENKMEEAEKMFELMKIH-GVVPNLYTYSAMIDGYCKTGNLRQAY 323

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
            + KE+  +++  PN++ + TL+DG CK      A  LF  MV K  + P+   YN LI 
Sbjct: 324 GLYKEILVAEL-LPNVVVFGTLVDGFCKARELVAARSLFVHMV-KFGVDPNLYVYNCLIH 381

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ G +  A  ++  M++   +P+VF YT L+NG C E +L EA  +F  MKN  + P
Sbjct: 382 GQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFP 441

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
            ++ Y +LI+ FC+   +++AL+L  EM   G + +I+TF+ ++ G C+   I+ A+G+ 
Sbjct: 442 SSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLY 501

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   GI  +  +Y  +++   ++  +++A+ L   ML  G  P+  T   L+    K 
Sbjct: 502 FEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 561

Query: 463 GMAEDA 468
           G   DA
Sbjct: 562 GRLSDA 567



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 200/402 (49%), Gaps = 23/402 (5%)

Query: 100 TILDKLARYKK--------FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLE 151
           +++++L RY +        F A++ +      ++ KF  G+F  L+  F    L E  L 
Sbjct: 134 SLIERLRRYSEPTNISHRLFNALEDI------QSPKFSIGVFSLLIMEFLEMGLFEDALW 187

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIK 210
           +  ++    R  P  KA    LN L+   + D    ++ Y     R L P+  I+++L +
Sbjct: 188 VSREM----RCSPDSKACLAILNGLVRRRRFDSV--WVDYQLMISRGLVPDVHIYSVLFQ 241

Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
              K+G      ++L EM    +  PN+  Y+  I  LC+  +  EA ++FE M     +
Sbjct: 242 CCFKQGFPSKKEKLLDEMTSLGVK-PNVYIYTIYIRDLCRENKMEEAEKMFELM-KIHGV 299

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
           +P+  TY+ +IDG+C+ G + +A  + + +      PNV  + TL++GFCK  +L  A+ 
Sbjct: 300 VPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARS 359

Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
           +F  M  F + P+   Y  LI+  C++G + EA+ LL EM+      D+ T+ I++ GLC
Sbjct: 360 LFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLC 419

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
            E ++ EA  + +++  + I+ +  +Y  +++  C++  +EKA++L   M   G  P+  
Sbjct: 420 TEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNII 479

Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           T + L+   CK    + A    F +   G  P+  ++  L++
Sbjct: 480 TFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLID 521



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 131/239 (54%), Gaps = 2/239 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L PN  +F  L+   CK   L +A  +   M K  +  PNL  Y+ LI G CK+G   EA
Sbjct: 334 LLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVD-PNLYVYNCLIHGQCKSGNMLEA 392

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           + L  EM S + + PD  TY +LI+G C   ++  A ++ + MKN    P+   Y +L++
Sbjct: 393 MGLLSEMESLN-LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIH 451

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFCKE  +++A ++  EM +  ++P+ I ++TLI+ +C+   +  A+ L  EM  +G   
Sbjct: 452 GFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVP 511

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
           D+VT+  ++    +E  ++EAL +   +   GI+ N  ++  +++   ++G L  AI+ 
Sbjct: 512 DVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDF 570



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 179/362 (49%), Gaps = 6/362 (1%)

Query: 152 MFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
           +F+ +  I   K S+   S    L++E  ++ L ++ L + ++ +R  P++     ++  
Sbjct: 152 LFNALEDIQSPKFSIGVFSL---LIMEFLEMGLFEDAL-WVSREMRCSPDSKACLAILNG 207

Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
             +R   +S + V  ++  S+   P++  YS L     K G   +  +L +EM S   + 
Sbjct: 208 LVRRRRFDSVW-VDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLG-VK 265

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P+   Y + I   CR  K++ A+K+ E MK +G  PN++ Y+ +++G+CK G L++A  +
Sbjct: 266 PNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL 325

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
           + E+    L P+ + + TL++ FC+A  +  A  L   M + G   ++  +N ++ G C+
Sbjct: 326 YKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCK 385

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G + EA+G+L ++    +  +  +Y I++N  C +  L +A  L + M      P   T
Sbjct: 386 SGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVT 445

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+   CK    E A      +   G +P   +++ L++  C+ R +  A  L  E+ 
Sbjct: 446 YNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMT 505

Query: 512 IK 513
           IK
Sbjct: 506 IK 507



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 13/272 (4%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + L L P+   + ILI   C    L  A  + + MK  ++ +P+ +TY++LI G CK   
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERI-FPSSVTYNSLIHGFCKEYN 458

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A++L  EM S   + P+ +T++ LIDG+C+   +  A  +   M   G  P+V  YT
Sbjct: 459 IEKALDLCSEMTSSG-VEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYT 517

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL------ 367
           TL++   KE  ++EA  ++ +M    + P+   +  L++ F + GR+ +A++        
Sbjct: 518 TLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQA 577

Query: 368 ---KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
              K + +R C    V F  ++ GLC+ G I  A      +   G+  +  SY  +L   
Sbjct: 578 ATGKSIVQRSC-WKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAH 636

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
            ++  +   + L   M+  G LP+    N+LL
Sbjct: 637 LREKRITDTMMLHCDMIKTGILPNLMV-NQLL 667


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/544 (25%), Positives = 243/544 (44%), Gaps = 82/544 (15%)

Query: 37  TPKADPPVETSDTCVDARKRS---RFISHGAAISL---IKCEKEPQCALEIFNTVSEQKG 90
           +P A  P+          K S   RFI    +  +      + EP  A   F  + E  G
Sbjct: 33  SPAAQYPIAEEQAVYTYSKDSVGDRFIDLNTSRVVEIFYNLKNEPNLAWSFFTQLKES-G 91

Query: 91  FNHNNATYATILDKLARYK----------------------KFEAVDAVLRQMTYETCKF 128
           F HN  TYA ++  L R++                         A+  VLR+   E    
Sbjct: 92  FQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEGE 151

Query: 129 HEGIFL----NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC---LNLLIESNQ 181
           H  + +     L+K +    + +  ++   +    T+ +  +  I +C   +N LIE  +
Sbjct: 152 HSSVLILVLDMLVKAYVRVGMFDEAIDALFQ----TKRRGFVPHIMSCNFLMNRLIEHGK 207

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
           +D+A    ++  + L L PN   + I IK  C++G  E A +V +EM+++ ++ PN +T 
Sbjct: 208 IDMAVAIYRHL-KRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVN-PNAVTC 265

Query: 242 STLIDGLCKNGR-----------------------------------FREAIELFEEMVS 266
           ST I+GLC + R                                    +EA ++F +MV+
Sbjct: 266 STYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVN 325

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
            + I PD   Y  LI  +C+ G + +A  +   M +NG   N    ++++   C+ G   
Sbjct: 326 -EGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMAS 384

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           E  + F E ++  +  D + Y  +++  C+ G+V+EA+ELL EMK R    D+V +  ++
Sbjct: 385 EVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLI 444

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            G C +GK+ +A  M E++   GI  +  +Y I++    + G  ++A+ELL  +  +G  
Sbjct: 445 AGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLK 504

Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
           P+ AT N ++  LC AG  ++A   L  L +       ++++ +V+  C+      A+EL
Sbjct: 505 PNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL----ENYSAMVDGYCKANFTRKAYEL 560

Query: 507 LDEL 510
              L
Sbjct: 561 FSRL 564



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 212/467 (45%), Gaps = 55/467 (11%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQM-------TYETCK-FHEGIFLNLMKHFS 141
           G N N+ TY   +  L R   FE    V R+M          TC  + EG    L  H  
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEG----LCSHKR 277

Query: 142 NCSLHERVLEMFHKIHPITREKPSLKAISTCLNL-LIESNQVDLAQNFLKYSNQHLRLKP 200
           +   +E +  +     PI     +      C  + L E+  V     F+   N+ +   P
Sbjct: 278 SDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDV-----FIDMVNEGI--AP 330

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +  I+  LI  +CK G L  A  +  +M  + +   N +  S+++  LC+ G   E ++ 
Sbjct: 331 DGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIK-TNCVIVSSILQCLCEMGMASEVVDQ 389

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           F+E      I  D + YN+++D  C+ GKV+ A +++  MK    + +V +YTTL+ G+C
Sbjct: 390 FKEF-RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYC 448

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
            +GKL +AK +F+EMK   ++PD + Y  L+  F R G   EALELL  +  +G K +  
Sbjct: 449 LQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSA 508

Query: 381 TFNIILGGLCREGKIEEALGML-------------------------------EKLWYDG 409
           T N I+ GLC  GK++EA   L                                +L   G
Sbjct: 509 THNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQG 568

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I + K S   +L+  C +GE +KA+ LL  ML     P+     +L+   C+ G  + A 
Sbjct: 569 ILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQ 628

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
           +    LVE G  P+  ++ +++   CR   L  A ++ +++  KE G
Sbjct: 629 LVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDM--KERG 673



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 155/324 (47%), Gaps = 29/324 (8%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKPN+   N +I+  C  G ++ A   L  ++   +       YS ++DG CK    R+A
Sbjct: 503 LKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE-----NYSAMVDGYCKANFTRKA 557

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF  + SK  IL    +   L+   C  G+ D+A  ++E M      PN   Y  L+ 
Sbjct: 558 YELFSRL-SKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIG 616

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            FC++G ++ A+ VFD +    + PD I YT +IN +CR   + EA ++  +MKERG K 
Sbjct: 617 AFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKP 676

Query: 378 DIVTFNIILGGLCR------------EGKIEEALGMLEKLWYD----GIYLNKASYRIVL 421
           D++T+ ++L G  +            +G  EE +      W +    GI  +   Y +++
Sbjct: 677 DVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDA-SPFWSEMKEMGIKPDVVCYTVLI 735

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +  C+   L+ AI L   M+ RG  P   T   LL   C  G   D AI L    EM FK
Sbjct: 736 DSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRG-DMDRAITLVN--EMSFK 792

Query: 482 ---PESDSWALLVELICRGRKLLF 502
              P+S + ++L   I + RK+ F
Sbjct: 793 GIEPDSRAMSVLHRGILKARKVQF 816



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 170/360 (47%), Gaps = 56/360 (15%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           ++NI++   CK G +E A E+L EMK  +MS  +++ Y+TLI G C  G+  +A  +FEE
Sbjct: 404 LYNIVVDALCKLGKVEEAVELLNEMKGRRMSL-DVVHYTTLIAGYCLQGKLVDAKNMFEE 462

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M  +  I PD +TYN+L+ GF R G    A ++++ +   G  PN   +  ++ G C  G
Sbjct: 463 MKERG-IEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAG 521

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K++EA+   + +++  L+     Y+ +++ +C+A    +A EL   + ++G      +  
Sbjct: 522 KVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCF 577

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            +L  LC EG+ ++AL +LE++    +  N+  Y  ++   C+ G++++A  +  +++ R
Sbjct: 578 KLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVER 637

Query: 444 GFLPHYATSNELLVRLCKA----------------GMAEDA---AIALFG---------- 474
           G  P   T   ++   C+                 G+  D     + L G          
Sbjct: 638 GITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMAR 697

Query: 475 ---------------------LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
                                + EMG KP+   + +L++  C+   L  A  L DE++ +
Sbjct: 698 SLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIAR 757



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 78/162 (48%)

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           L+  + R G  DEA++ L + K RG    I++ N ++  L   GKI+ A+ +   L   G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           +  N  +Y I +   C+KG  E+A+++ R M   G  P+  T +  +  LC    ++   
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            AL  L    +  ++ ++  ++   C   KL  A ++  ++V
Sbjct: 283 EALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMV 324



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 2/97 (2%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           + + +KP+   + +LI  HCK   L+ A  +  EM    +  P+++TY+ L+   C  G 
Sbjct: 720 KEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQ-PDIVTYTALLSSCCSRGD 778

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
              AI L  EM  K  I PD+   +VL  G  +  KV
Sbjct: 779 MDRAITLVNEMSFKG-IEPDSRAMSVLHRGILKARKV 814


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 211/432 (48%), Gaps = 22/432 (5%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNAT-----YATILDKLARYKKFEA 113
           FIS+ +  +      +   A+ +FN +  Q      N T     +  IL  L + K +  
Sbjct: 51  FISYSSTSTTFHSNNDVDDAVSLFNRLLRQ------NPTPPAFEFNKILGSLVKSKHYHT 104

Query: 114 VDAVLRQMTYETCK---FHEGIFLNLMKHFS--NCSLHERVLEMFHKIHPITREKPSLKA 168
           V ++ ++M +   K   F+  I +          C +H+  L  FH             +
Sbjct: 105 VLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFL--FHDKLVALGFHLDQVS 162

Query: 169 ISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
             T ++ L +  +   A + L+  +  L ++ N  ++N +I   CK   +  AF++  EM
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVDGKL-VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEM 221

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
               +S PN++TYS LI G    G+ ++AI+LF +++ ++ I PD  T+N+L+DGFC+  
Sbjct: 222 VSKGIS-PNVVTYSALISGFFVVGKLKDAIDLFNKIILEN-IKPDGYTFNILVDGFCKDR 279

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
           K+   K +   M   G  P+V  Y +LM+G+C   ++  AK +F+ M    + PD   Y 
Sbjct: 280 KMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYN 339

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
            LIN FC+  +VD+A+ L  EM  +    ++VT+N ++ GL + G+I  AL +++++   
Sbjct: 340 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 399

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           G+  N  +Y  +++   +  +++KAI L+     +G  P   T   L+  LCK     D 
Sbjct: 400 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE-GYDI 458

Query: 469 AIALFGLVEMGF 480
            +  + ++  GF
Sbjct: 459 TVNTYNVMIHGF 470



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 154/292 (52%), Gaps = 2/292 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +  LI   CK G   +A ++L+ +   ++   N + Y+T+I G+CK+    +A +L+ EM
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVD-GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEM 221

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           VSK  I P+ +TY+ LI GF   GK+  A  +   +      P+ + +  L++GFCK+ K
Sbjct: 222 VSKG-ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 280

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++E K VF  M    + PD + Y +L++ +C    V+ A  +   M + G   DI ++NI
Sbjct: 281 MKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 340

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+  K+++A+ +  ++    I  N  +Y  +++   + G +  A++L+  M  RG
Sbjct: 341 LINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 400

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             P+  T N ++  L K    + A   +    + G +P   ++ +L++ +C+
Sbjct: 401 VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 167/323 (51%), Gaps = 8/323 (2%)

Query: 198 LKPNTCIFNILIKHHCKRG----TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           +KPN    NILI   C+ G     +  AF +  +   +   + + ++Y TLI GLCK G 
Sbjct: 117 IKPNLFNCNILIYCFCQLGLIPCQIHQAF-LFHDKLVALGFHLDQVSYGTLIHGLCKVGE 175

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
            R A++L + +  K  +  +A+ YN +I G C+   V+ A  +   M + G +PNV  Y+
Sbjct: 176 TRAALDLLQRVDGK-LVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 234

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
            L++GF   GKL++A ++F+++    +KPD   +  L++ FC+  ++ E   +   M ++
Sbjct: 235 ALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ 294

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G   D+VT+N ++ G C   ++  A  +   +   G+  +  SY I++N  C+  +++KA
Sbjct: 295 GIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 354

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
           + L   M C+  +P+  T N L+  L K+G    A   +  + + G  P   ++  +++ 
Sbjct: 355 MNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 414

Query: 494 ICRGRKLLFAFELLDELVIKESG 516
           + +  ++  A  L+ +   K+ G
Sbjct: 415 LFKTHQVDKAIALITKF--KDQG 435



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 129/252 (51%), Gaps = 17/252 (6%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+   +N L+  +C    + +A  +   M +  ++ P++ +Y+ LI+G CK  +  +A+ 
Sbjct: 298 PDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVN-PDIRSYNILINGFCKIKKVDKAMN 356

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           LF EM  K+ I+P+ +TYN LIDG  + G++  A ++++ M + G  PN+  Y ++++  
Sbjct: 357 LFNEMHCKN-IIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 415

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K  ++ +A  +  + K+  ++P    YT LI+  C+                 G    +
Sbjct: 416 FKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV---------------EGYDITV 460

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
            T+N+++ G C++G  +EAL +L K+       N  +Y I +       E +KA +L R 
Sbjct: 461 NTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFRE 520

Query: 440 MLCRGFLPHYAT 451
           M+ RG L   A+
Sbjct: 521 MITRGLLNRSAS 532



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 141/283 (49%), Gaps = 5/283 (1%)

Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG--- 288
           Q   P    ++ ++  L K+  +   + L ++M  +  I P+    N+LI  FC+ G   
Sbjct: 80  QNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRG-IKPNLFNCNILIYCFCQLGLIP 138

Query: 289 -KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
            ++ +A    + +   G + +  +Y TL++G CK G+ + A ++   +   L++ + + Y
Sbjct: 139 CQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMY 198

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
            T+I   C+   V++A +L  EM  +G   ++VT++ ++ G    GK+++A+ +  K+  
Sbjct: 199 NTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIIL 258

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
           + I  +  ++ I+++  C+  ++++   +  +M+ +G +P   T N L+   C       
Sbjct: 259 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNT 318

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           A      + + G  P+  S+ +L+   C+ +K+  A  L +E+
Sbjct: 319 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 361



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 6/181 (3%)

Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
            L K + I Y++    F     VD+A+ L   +  +        FN ILG L +      
Sbjct: 45  LLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHT 104

Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKG----ELEKAIELLRLMLCRGFLPHYATSN 453
            L + +K+ + GI  N  +  I++   CQ G    ++ +A      ++  GF     +  
Sbjct: 105 VLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYG 164

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGF-KPESDSWALLVELICRGRKLLFAFELLDELVI 512
            L+  LCK G    AA+ L   V+    +  +  +  ++  +C+ + +  AF+L  E+V 
Sbjct: 165 TLIHGLCKVGETR-AALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVS 223

Query: 513 K 513
           K
Sbjct: 224 K 224


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 159/301 (52%), Gaps = 1/301 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L  KPN   F  LI   CK+G+++ AFE+L+EM ++    PN+ T++ LIDGLCK G   
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK-PNVYTHTALIDGLCKRGWTE 339

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  LF ++V  D   P+  TY  +I G+C+  K++RA+ +   MK  G  PNV  YTTL
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK G    A E+ + M +    P+   Y   I+  C+  R  EA ELL +    G 
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
           +AD VT+ I++   C++  I +AL    ++   G   +     I++   C++ +++++  
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L +L++  G +P   T   ++   CK G  + A      +   G  P+S ++  L+  +C
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579

Query: 496 R 496
           +
Sbjct: 580 K 580



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 158/313 (50%), Gaps = 3/313 (0%)

Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
           KPN      LI   CKRG  E AF +  ++ +S    PN+ TY+++I G CK  +   A 
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378

Query: 259 ELFEEMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            LF  M  K+Q + P+  TY  LI+G C+ G   RA ++M  M + G  PN++ Y   ++
Sbjct: 379 MLFSRM--KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             CK+ +  EA E+ ++  +  L+ D + YT LI   C+   +++AL     M + G +A
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+   NI++   CR+ K++E+  + + +   G+   K +Y  +++  C++G+++ A++  
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G +P   T   L+  LCK  M ++A      +++ G  P   +   L    C+ 
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616

Query: 498 RKLLFAFELLDEL 510
                A  LL+ L
Sbjct: 617 NDSANAMILLEPL 629



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 169/370 (45%), Gaps = 41/370 (11%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAF 222
           PS   ++  L + +E   ++ A+N   +    +R + P++  + +++    + G ++ A 
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENV--FDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 237

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
             L  M +     P+  T + ++  LC+NG    AI  F +M+      P+ + +  LID
Sbjct: 238 RWLTGMIQRGF-IPDNATCTLILTALCENGLVNRAIWYFRKMIDLG-FKPNLINFTSLID 295

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVF-------------------------------- 310
           G C+ G + +A +++E M  NG  PNV+                                
Sbjct: 296 GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK 355

Query: 311 ----NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
                YT+++ G+CKE KL  A+ +F  MK   L P+   YTTLIN  C+AG    A EL
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           +  M + G   +I T+N  +  LC++ +  EA  +L K +  G+  +  +Y I++   C+
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           + ++ +A+     M   GF      +N L+   C+    +++      +V +G  P  ++
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535

Query: 487 WALLVELICR 496
           +  ++   C+
Sbjct: 536 YTSMISCYCK 545



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 13/272 (4%)

Query: 253 RFREAIELFEEMVSKDQILPDA------LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           +FR  + L+  +V+ D +L +            ++  F   G+++ A  ++  M+N G  
Sbjct: 122 KFRHFMRLY--LVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLT 179

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL-INCFCRAGRVDEALE 365
           P+      ++    + G ++ A+ VFDEM    + PD+  Y  + I CF R G++ EA  
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADR 238

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
            L  M +RG   D  T  +IL  LC  G +  A+    K+   G   N  ++  +++  C
Sbjct: 239 WLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC 298

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FKPES 484
           +KG +++A E+L  M+  G+ P+  T   L+  LCK G  E A      LV    +KP  
Sbjct: 299 KKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNV 358

Query: 485 DSWALLVELICRGRKLLFAFELLDELVIKESG 516
            ++  ++   C+  KL  A  L   +  KE G
Sbjct: 359 HTYTSMIGGYCKEDKLNRAEMLFSRM--KEQG 388



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 5/208 (2%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+ +   + ILI+  CK+  +  A      M K+     ++   + LI   C+  + +E+
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE-ADMRLNNILIAAFCRQKKMKES 517

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+ +VS   ++P   TY  +I  +C+ G +D A K    MK +GC P+ F Y +L++
Sbjct: 518 ERLFQLVVSLG-LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK+  + EA ++++ M +  L P  +   TL   +C+      A+ LL+ + +   K 
Sbjct: 577 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK---KL 633

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKL 405
            I T   ++  LC E K+  A    +KL
Sbjct: 634 WIRTVRTLVRKLCSEKKVGVAALFFQKL 661


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 188/362 (51%), Gaps = 25/362 (6%)

Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
            H++V+    K++ ++          T +N L +  Q   A  FL+  +  L ++P+  +
Sbjct: 104 FHDKVVAQGFKLNQVSY--------GTLINGLCKVGQTRAALEFLRRIDGKL-VQPDVVM 154

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N +I   CK   +  AF +  EM   ++  P+++TY+TLI GLC   + ++AI L  +M
Sbjct: 155 YNTIIDGLCKDKLVNDAFNLYFEMVAKRIC-PSVVTYNTLICGLCIMAQLKDAIGLLHKM 213

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG-----F 319
           + +D I P   T+++LID FC+ GK+  AK +   M      PN+  Y +LM+G      
Sbjct: 214 ILED-INPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNV 272

Query: 320 CKEGK---------LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            K+ K         + EA  +F+EM    + PD + Y +LI+  C++GR   AL+ + EM
Sbjct: 273 VKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEM 332

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
             RG   DI T+N +L  LC+   +++A+ +L KL   GI  +  +Y I++N  C+ G L
Sbjct: 333 HYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRL 392

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           + A ++   +L +G+     T N ++   CK G+ ++    +  + + G  P++ +  ++
Sbjct: 393 KDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEII 452

Query: 491 VE 492
           + 
Sbjct: 453 IR 454



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 18/333 (5%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            K N   +  LI   CK G   +A E L+ +   ++  P+++ Y+T+IDGLCK+    +A
Sbjct: 113 FKLNQVSYGTLINGLCKVGQTRAALEFLRRID-GKLVQPDVVMYNTIIDGLCKDKLVNDA 171

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             L+ EMV+K +I P  +TYN LI G C   ++  A  ++  M     NP V+ ++ L++
Sbjct: 172 FNLYFEMVAK-RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILID 230

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL------INCFCRAGR--------VDEA 363
            FCKEGK++EAK VF  M    +KP+ + Y +L      +N   +A          VDEA
Sbjct: 231 AFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEA 290

Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
           + L +EM  +    D+V +N ++ GLC+ G+   AL  + ++ Y G   +  +Y  +L+ 
Sbjct: 291 MNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDA 350

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
            C+   ++KAIELL  +  +G  P   T N L+  LCK+G  +DA      L+  G+  +
Sbjct: 351 LCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTD 410

Query: 484 SDSWALLVELICRGRKLLFAFELLDELVIKESG 516
             ++  +++  C  +K LF   L     +K+SG
Sbjct: 411 VYTYNAMIKGFC--KKGLFDETLAMVSKMKDSG 441



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 187/385 (48%), Gaps = 20/385 (5%)

Query: 74  EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
           E   AL   + V  Q GF  N  +Y T+++ L +  +  A    LR++  +  +    ++
Sbjct: 97  EIHKALHFHDKVVAQ-GFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMY 155

Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
             ++       L      ++ ++    R  PS+   +T +  L    Q+  A   L +  
Sbjct: 156 NTIIDGLCKDKLVNDAFNLYFEM-VAKRICPSVVTYNTLICGLCIMAQLKDAIGLL-HKM 213

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG-----L 248
               + P    F+ILI   CK G ++ A  V   M K  +  PN++TY++L+DG     +
Sbjct: 214 ILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVK-PNIVTYNSLMDGHHLVNV 272

Query: 249 CKNGR---------FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
            K  +           EA+ LFEEM  K QI PD + YN LIDG C+ G+   A K +  
Sbjct: 273 VKKAKSIFNTMIKMVDEAMNLFEEMHFK-QIYPDMVIYNSLIDGLCKSGRTPYALKFIGE 331

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M   G  P++F Y +L++  CK   + +A E+  ++K+  ++P    Y  LIN  C++GR
Sbjct: 332 MHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGR 391

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           + +A ++ +++  +G   D+ T+N ++ G C++G  +E L M+ K+   G   +  +  I
Sbjct: 392 LKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEI 451

Query: 420 VLNFSCQKGELEKAIELLRLMLCRG 444
           ++     KGE +KA +  R M+ RG
Sbjct: 452 IIRSLFDKGENDKAGK-FREMIVRG 475



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 170/352 (48%), Gaps = 20/352 (5%)

Query: 184 LAQNFLKYSNQHLRLK----PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
           L QN L +S     LK     +   F  LIK  C +G +  A     +   +Q    N +
Sbjct: 60  LGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALH-FHDKVVAQGFKLNQV 118

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           +Y TLI+GLCK G+ R A+E    +  K  + PD + YN +IDG C+   V+ A  +   
Sbjct: 119 SYGTLINGLCKVGQTRAALEFLRRIDGK-LVQPDVVMYNTIIDGLCKDKLVNDAFNLYFE 177

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M      P+V  Y TL+ G C   +L++A  +  +M    + P    ++ LI+ FC+ G+
Sbjct: 178 MVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGK 237

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGG-----LCREGK---------IEEALGMLEKL 405
           + EA  +   M +   K +IVT+N ++ G     + ++ K         ++EA+ + E++
Sbjct: 238 MKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEM 297

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
            +  IY +   Y  +++  C+ G    A++ +  M  RG  P   T N LL  LCK    
Sbjct: 298 HFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHV 357

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGT 517
           + A   L  L + G +P   ++ +L+  +C+  +L  A ++ ++L++K   T
Sbjct: 358 DKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNT 409



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 148/290 (51%), Gaps = 19/290 (6%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
           NL+T S LI+   + G+   +  +F  ++ K     DA+T+  LI G C  G++ +A   
Sbjct: 46  NLVTLSILINCYSQLGQNALSFSVFANILKKGY-GSDAITFTTLIKGLCLKGEIHKALHF 104

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
            + +   G   N  +Y TL+NG CK G+ + A E    +   L++PD + Y T+I+  C+
Sbjct: 105 HDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCK 164

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
              V++A  L  EM  +     +VT+N ++ GLC   ++++A+G+L K+  + I     +
Sbjct: 165 DKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYT 224

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL-----LVRLCKAGMA------ 465
           + I+++  C++G++++A  +  +M+     P+  T N L     LV + K   +      
Sbjct: 225 FSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMI 284

Query: 466 --EDAAIALFGLVEMGFK---PESDSWALLVELICRGRKLLFAFELLDEL 510
              D A+ LF   EM FK   P+   +  L++ +C+  +  +A + + E+
Sbjct: 285 KMVDEAMNLFE--EMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEM 332



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 101/208 (48%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++F +  ++    K         +  +M+   L  + +  + LINC+ + G+   +  +
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              + ++G  +D +TF  ++ GLC +G+I +AL   +K+   G  LN+ SY  ++N  C+
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G+   A+E LR +  +   P     N ++  LCK  +  DA    F +V     P   +
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 487 WALLVELICRGRKLLFAFELLDELVIKE 514
           +  L+  +C   +L  A  LL ++++++
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILED 217



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           MEF   NG   N+   + L+N + + G+   +  VF  +       D I +TTLI   C 
Sbjct: 38  MEF---NGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCL 94

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G + +AL    ++  +G K + V++  ++ GLC+ G+   AL  L ++    +  +   
Sbjct: 95  KGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVM 154

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           Y  +++  C+   +  A  L   M+ +   P   T N L+  LC     +DA   L  ++
Sbjct: 155 YNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMI 214

Query: 477 EMGFKPESDSWALLVELICRGRKL 500
                P   ++++L++  C+  K+
Sbjct: 215 LEDINPTVYTFSILIDAFCKEGKM 238



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 55/260 (21%)

Query: 97  TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK--HFSNC----------- 143
           T++ ++D   +  K +    V   M  E  K +   + +LM   H  N            
Sbjct: 224 TFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTM 283

Query: 144 -SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP-N 201
             + +  + +F ++H   +  P +   ++ ++ L +S +   A  F+     H R +P +
Sbjct: 284 IKMVDEAMNLFEEMH-FKQIYPDMVIYNSLIDGLCKSGRTPYALKFI--GEMHYRGQPPD 340

Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
              +N L+   CK   ++ A E+L ++K  Q   P++ TY+ LI+GLCK+GR ++A ++F
Sbjct: 341 IFTYNSLLDALCKNYHVDKAIELLTKLK-DQGIQPSVCTYNILINGLCKSGRLKDAEKVF 399

Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGG--------------------------------- 288
           E+++ K     D  TYN +I GFC+ G                                 
Sbjct: 400 EDLLVKGYN-TDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFD 458

Query: 289 --KVDRAKKIMEFMKNNGCN 306
             + D+A K  E +    C+
Sbjct: 459 KGENDKAGKFREMIVRGKCH 478


>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 217/449 (48%), Gaps = 26/449 (5%)

Query: 82  FNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-----------TCKFHE 130
           F  V       H+  +  T++  LA++K+F+    +L ++                + H+
Sbjct: 87  FKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHD 146

Query: 131 G------IFLNLMKHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLIESNQV 182
                  I   L+  ++N  + +  +++F   ++H     KP L A +  LN L ++   
Sbjct: 147 DPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGF---KPHLHACTVLLNSLAKARLT 203

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
           ++     K     + + PN  IFN+LI   CK G +E A ++L EM+ S+  +P+L TY+
Sbjct: 204 NMVWKVYK-KMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME-SRFIFPDLFTYN 261

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG-GKVDRAKKIMEFMK 301
           TLI   CK G   EA+ + + M  +  + PD +TYN LI GFCR    ++ A ++ E M+
Sbjct: 262 TLISLYCKKGMHYEALGIQDRM-ERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVME 320

Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
             G +P V  Y +++   C+EGK+++A  + +EM    ++PD +   TLIN +C+ G + 
Sbjct: 321 VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMG 380

Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
            A+++ K+M E G K D  TF  ++ G C+  +++ A   L ++   G   + ++Y  ++
Sbjct: 381 SAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 440

Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
           +    +   E  I L   +  +G     +    L+ RLCK    E A      +   G K
Sbjct: 441 DSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMK 500

Query: 482 PESDSWALLVELICRGRKLLFAFELLDEL 510
            +S  +  L     +  K + A ++LDE+
Sbjct: 501 GDSVVYTSLAYAYFKAGKAIAASDMLDEM 529



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 37/211 (17%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P    +N +++  C+ G ++ A  +L EM + ++  P+ +T +TLI+  CK G    A
Sbjct: 324 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVE-PDNVTCNTLINAYCKIGDMGSA 382

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
           +++ ++M+    + PD  T+  LI GFC+  +VD AK+ +  M + G +P+   Y+ L++
Sbjct: 383 MKVKKKMLEAG-LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVD 441

Query: 318 GF-----------------------------------CKEGKLQEAKEVFDEMKNFLLKP 342
            +                                   CK  K++ A+ +F  M+   +K 
Sbjct: 442 SYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKG 501

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           D++ YT+L   + +AG+   A ++L EM +R
Sbjct: 502 DSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 532


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 178/343 (51%), Gaps = 2/343 (0%)

Query: 170 STCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM- 228
           S  L  L  + + D   N L +    L ++P+T  +N ++K  C+    + A ++L  M 
Sbjct: 158 SILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMV 217

Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
           KKS    PN++TY+T+I GL + G   +A  LF EM+ +  ++PD +TY  +ID  C+  
Sbjct: 218 KKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQG-VVPDVVTYTSIIDALCKAR 276

Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
            +D+A+ ++  M +NG  PN   Y  +++G+   G+ +E   +F EM +  L P+ +   
Sbjct: 277 AMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCN 336

Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
           + ++  C+ G+  EA E    M  +G K ++VT++++L G   EG   + L +   +  +
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGN 396

Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           GI  ++  + IV++   ++G +++ + +   M  +G +P   T   ++    + G   DA
Sbjct: 397 GIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADA 456

Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
                 ++ MG KPE   +  L++  C    L+ A EL+ E++
Sbjct: 457 MDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMM 499



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 211/420 (50%), Gaps = 9/420 (2%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           SL K  K  + A E F++++  KG   N  TY+ +L   A    F  +  +   M     
Sbjct: 341 SLCKHGKSKEAA-EFFDSMA-AKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
              + +F  ++  +    + +  + +F ++     +     A +  + +   S    LA 
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQ---EQGVIPDACTYGIVIAAFSRMGRLAD 455

Query: 187 NFLKYSNQ-HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
              K++    + LKP   +++ LI+  C  G L  A E++ EM    +  PN++ ++++I
Sbjct: 456 AMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSII 515

Query: 246 DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
           + LCK GR  EA ++F+ ++   +  PD +T+N LIDG+   GK+++A  +++ M + G 
Sbjct: 516 NSLCKEGRVVEAHDIFDFVIHIGE-RPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGI 574

Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
            P+V +Y TL++G+C+ G++ +   +F EM +  +KP TI Y  +++     GR   A +
Sbjct: 575 EPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKK 634

Query: 366 LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           +  EM E G   DI T  IILGGLCR    +EA+ M +KL    +  N A    +++   
Sbjct: 635 MCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMY 694

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPES 484
           +  + E+A EL   +   G +P+ +T   ++  L K G  E+A   +F L+E  G  P S
Sbjct: 695 KVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEAD-NMFSLMEKSGCAPSS 753



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 206/447 (46%), Gaps = 43/447 (9%)

Query: 72  EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
           E E   A  +F+ + +Q G   +  TY +I+D L + +  +  + VLRQM         G
Sbjct: 240 EGEVSKACNLFHEMMQQ-GVVPDVVTYTSIIDALCKARAMDKAELVLRQM------ISNG 292

Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
              N + +  NC +H                              I     + A  F + 
Sbjct: 293 FQPNKVTY--NCMIH---------------------------GYSISGQWKETAGMFREM 323

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
           ++Q   L PN    N  +   CK G  + A E    M  ++   PNL+TYS L+ G    
Sbjct: 324 TSQG--LMPNIVTCNSYMSSLCKHGKSKEAAEFFDSM-AAKGHKPNLVTYSVLLHGYATE 380

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           G F + + LF  M   + I+ D   +N++ID + + G +D    I   M+  G  P+   
Sbjct: 381 GCFVDMLNLFNSM-EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACT 439

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  ++  F + G+L +A + F++M    LKP+ I Y +LI  FC  G + +A EL+ EM 
Sbjct: 440 YGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMM 499

Query: 372 ERGC-KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
            RG  + +IV FN I+  LC+EG++ EA  + + + + G   +  ++  +++     G++
Sbjct: 500 SRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKI 559

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           EKA  +L  M+  G  P   + N L+   C+ G  +D  I    ++  G KP + ++ ++
Sbjct: 560 EKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGII 619

Query: 491 VELICRGRKLLFAFELLDELVIKESGT 517
           +  +    + + A ++  E++  ESGT
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMI--ESGT 644



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 153/299 (51%), Gaps = 1/299 (0%)

Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
           Q   + P+ C + I+I    + G L  A +   +M    +  P  I Y +LI G C +G 
Sbjct: 429 QEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLK-PEGIVYHSLIQGFCMHGN 487

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
             +A EL  EM+S+    P+ + +N +I+  C+ G+V  A  I +F+ + G  P+V  + 
Sbjct: 488 LVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFN 547

Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
           +L++G+   GK+++A  V D M +  ++PD + Y TLI+ +CR GR+D+ L L  EM  +
Sbjct: 548 SLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSK 607

Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
           G K   +T+ IIL GL  +G+   A  M  ++   G  ++ ++  I+L   C+    ++A
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEA 667

Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
           I + + +       + A  N ++  + K    E+A      +   G  P + ++ ++++
Sbjct: 668 IAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIK 726



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 179/370 (48%), Gaps = 5/370 (1%)

Query: 144 SLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
           S  +R L++ H +   +    P++   +T ++ L    +V  A N      Q   + P+ 
Sbjct: 204 SRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQ-GVVPDV 262

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             +  +I   CK   ++ A  VL++M  +    PN +TY+ +I G   +G+++E   +F 
Sbjct: 263 VTYTSIIDALCKARAMDKAELVLRQMISNGFQ-PNKVTYNCMIHGYSISGQWKETAGMFR 321

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
           EM S+  ++P+ +T N  +   C+ GK   A +  + M   G  PN+  Y+ L++G+  E
Sbjct: 322 EMTSQG-LMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATE 380

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G   +   +F+ M+   +  D   +  +I+ + + G +DE + +  +M+E+G   D  T+
Sbjct: 381 GCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTY 440

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
            I++    R G++ +A+    ++   G+      Y  ++   C  G L KA EL+  M+ 
Sbjct: 441 GIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMS 500

Query: 443 RGF-LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
           RG   P+    N ++  LCK G   +A      ++ +G +P+  ++  L++      K+ 
Sbjct: 501 RGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIE 560

Query: 502 FAFELLDELV 511
            AF +LD ++
Sbjct: 561 KAFGVLDAMI 570



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 3/259 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P  C +NIL+   C+       F +     K+ +   ++I  S L+  L    R  + + 
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKM-DVIVASILLKCLYHAKRSDDVVN 175

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM--KNNGCNPNVFNYTTLMN 317
           L    + +  + PD ++YN ++   C   +  RA  ++  M  K+ GC+PNV  Y T+++
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  +EG++ +A  +F EM    + PD + YT++I+  C+A  +D+A  +L++M   G + 
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + VT+N ++ G    G+ +E  GM  ++   G+  N  +    ++  C+ G+ ++A E  
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 438 RLMLCRGFLPHYATSNELL 456
             M  +G  P+  T + LL
Sbjct: 356 DSMAAKGHKPNLVTYSVLL 374



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 174/396 (43%), Gaps = 47/396 (11%)

Query: 81  IFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-- 138
           IF  + EQ G   +  TY  ++   +R  +         QM     K    ++ +L++  
Sbjct: 424 IFTQMQEQ-GVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGF 482

Query: 139 --HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
             H +     E V EM  +  P    +P++   ++ +N L +  +V  A +   +   H+
Sbjct: 483 CMHGNLVKAKELVSEMMSRGIP----RPNIVFFNSIINSLCKEGRVVEAHDIFDFV-IHI 537

Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
             +P+   FN LI  +   G +E AF VL  M  + +  P++++Y+TLIDG C+NGR  +
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIE-PDVVSYNTLIDGYCRNGRIDD 596

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
            + LF EM+SK  + P  +TY +++ G    G+   AKK+   M  +G   ++     ++
Sbjct: 597 GLILFGEMLSKG-VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIIL 655

Query: 317 NGFCKEG-----------------------------------KLQEAKEVFDEMKNFLLK 341
            G C+                                     K +EAKE+FD +    L 
Sbjct: 656 GGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLV 715

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+   Y  +I    + G V+EA  +   M++ GC       N I+  L  +G+I +A   
Sbjct: 716 PNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNY 775

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + K+    I L  ++  +++    ++G+  + ++LL
Sbjct: 776 MFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 22/279 (7%)

Query: 249 CKNGRFREAIELFEEMVSKDQ----ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
           C++G    A+ LF  +  ++      LP   TYN+L+D  CR  +      +       G
Sbjct: 91  CRDGP-SLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTG 149

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL--------KPDTIGYTTLINCFCR 356
              +V   + L+   C    L  AK   D++ N LL        +PDTI Y T++   C 
Sbjct: 150 LKMDVIVASILLK--C----LYHAKRS-DDVVNLLLHRMPELGVEPDTISYNTVVKTLCE 202

Query: 357 AGRVDEALELLKEM--KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
             R   AL+LL  M  K  GC  ++VT+N ++ GL REG++ +A  +  ++   G+  + 
Sbjct: 203 DSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDV 262

Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG 474
            +Y  +++  C+   ++KA  +LR M+  GF P+  T N ++     +G  ++ A     
Sbjct: 263 VTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFRE 322

Query: 475 LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
           +   G  P   +    +  +C+  K   A E  D +  K
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAK 361


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 155/272 (56%), Gaps = 3/272 (1%)

Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
            ++ LAQ+    S     L+P+   FN L+  + K G L+  F +   M+ S +  P++ 
Sbjct: 150 GEIRLAQSVFD-SITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQ-PDVY 207

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           T+S LI+GLCK  +  +A ELF+EM+  + ++P+ +T+  LIDG C+ G+VD A +I   
Sbjct: 208 THSVLINGLCKESKMDDANELFDEMLB-NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQ 266

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           M +    P++  Y TL+ G CK+G L++  ++ DEM    LKPD I YTTLI+  C+ G 
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGD 326

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           ++ A E  K M +   + D   +  ++ GLC+EG+  +A  ML ++   G+     +Y +
Sbjct: 327 LETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
           ++N  C+KG++    +LL+ M   G+ P+  T
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 162/278 (58%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK G  R A  +F+  ++K  + P  +++N L++G+ + G +D 
Sbjct: 131 GYPASLYFFNILMHNFCKEGEIRLAQSVFDS-ITKWGLRPSVVSFNTLMNGYIKIGDLDE 189

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M+ +G  P+V+ ++ L+NG CKE K+ +A E+FDEM B  L P+ + +TTLI+
Sbjct: 190 GFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLID 249

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ ++M  +    D++T+N ++ GLC++G +++   +++++   G+  
Sbjct: 250 GHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKP 309

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++ +C++G+LE A E  + M+             L+  LC+ G + DA   L
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKML 369

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KPE  ++ +++   C+   +    +LL E+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 2/278 (0%)

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           FNIL+ + CK G +  A  V   + K  +  P++++++TL++G  K G   E   L + +
Sbjct: 139 FNILMHNFCKEGEIRLAQSVFDSITKWGLR-PSVVSFNTLMNGYIKIGDLDEGFRL-KSV 196

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           +    + PD  T++VLI+G C+  K+D A ++ + M BNG  PN   +TTL++G CK G+
Sbjct: 197 MQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGR 256

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           +  A E++ +M +  L PD I Y TLI   C+ G + +  +L+ EM  +G K D +T+  
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTT 316

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           ++ G C+EG +E A    +++  + I L+  +Y  +++  CQ+G    A ++LR ML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
             P   T   ++   CK G     +  L  +   G+ P
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXP 414



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
           H  L     +  I++    K G+  + F  + E K +Q S  ++  +S LI    ++G  
Sbjct: 26  HQMLPEAKTLIQIVVSRKGK-GSASAVFAAILETKGTQRS--DIYVFSGLITAYLESGFL 82

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRG-----GKVDRAKKIMEFMKNN---GCN 306
           R+AIE +         L     + V  D  CR       K+   K +  F + +   G  
Sbjct: 83  RDAIECYR--------LTKEHKFRVPFDT-CRKVIEHLMKLKYFKLVWGFYEESLECGYP 133

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            +++ +  LM+ FCKEG+++ A+ VFD +  + L+P  + + TL+N + + G +DE   L
Sbjct: 134 ASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL 193

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
              M+  G + D+ T ++++ GLC+E K+++A  + +++  +G+  N  ++  +++  C+
Sbjct: 194 KSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCK 253

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
            G ++ A+E+ R ML +  LP   T N L+  LCK G  +     +  +   G KP+  +
Sbjct: 254 NGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKIT 313

Query: 487 WALLVELICRGRKLLFAFE 505
           +  L++  C+   L  AFE
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332


>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hederifolia]
          Length = 431

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 150/259 (57%), Gaps = 2/259 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L+P+   +N L+  + + G L   F +   M  S +  P++ TYS LI+GLCK  +  +A
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQ-PDVYTYSVLINGLCKESKMDDA 231

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ELF+EM+ K  ++P+ +T+  LIDG C+ G+VD A +I + M +    P++  Y TL+ 
Sbjct: 232 NELFDEMLVKG-LIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIY 290

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G  K+G L++A ++ DEM    LKPD   Y TLI+  C+ G +D A E  K M +   + 
Sbjct: 291 GLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D V +  ++ GLC+EG+  +A  ML ++   G+  +  +Y +++N  C+KG++ K  +LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLL 410

Query: 438 RLMLCRGFLPHYATSNELL 456
           + M   G +P   T N L+
Sbjct: 411 KEMQRDGHVPSVVTYNVLM 429



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 160/278 (57%), Gaps = 2/278 (0%)

Query: 234 SYP-NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            YP +L  ++ L+   CK+G  R A  +F+  ++K  + P  ++YN L++G+ R G ++ 
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDA-ITKWGLRPSVVSYNTLMNGYIRLGDLNE 195

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
             ++   M  +G  P+V+ Y+ L+NG CKE K+ +A E+FDEM    L P+ + +TTLI+
Sbjct: 196 GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 255

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
             C+ GRVD A+E+ K+M  +    D++T+N ++ GL ++G +++A  +++++   G+  
Sbjct: 256 GHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKP 315

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +K +Y  +++  C++G+L+ A E  + M+             L+  LC+ G + DA   L
Sbjct: 316 DKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 375

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             ++ +G KP+  ++ +++   C+   +    +LL E+
Sbjct: 376 REMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEM 413



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 150/261 (57%), Gaps = 5/261 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
           +PS+ + +T +N  I     DL + F LK +     ++P+   +++LI   CK   ++ A
Sbjct: 174 RPSVVSYNTLMNGYIRLG--DLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
            E+  EM    +  PN +T++TLIDG CKNGR   A+E++++M+S+  +LPD +TYN LI
Sbjct: 232 NELFDEMLVKGL-IPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-CLLPDLITYNTLI 289

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G  + G + +A  +++ M   G  P+ F Y TL++G CKEG L  A E    M    ++
Sbjct: 290 YGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIR 349

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
            D + YT LI+  C+ GR  +A ++L+EM   G K D  T+ +I+   C++G + +   +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKL 409

Query: 402 LEKLWYDGIYLNKASYRIVLN 422
           L+++  DG   +  +Y +++N
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMN 430



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCKRGTLES 220
           +P +   S  +N L + +++D A       ++ L   L PN   F  LI  HCK G ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELF---DEMLVKGLIPNGVTFTTLIDGHCKNGRVDL 265

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
           A E+ K+M  SQ   P+LITY+TLI GL K G  ++A +L +EM S   + PD  TY  L
Sbjct: 266 AMEIYKQML-SQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEM-SMKGLKPDKFTYXTL 323

Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
           IDG C+ G +D A +  + M       +   YT L++G C+EG+  +A+++  EM +  L
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
           KPD   YT +IN FC+ G V +  +LLKEM+  G    +VT+N+++ G
Sbjct: 384 KPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 52/321 (16%)

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSK----------------------DQILPDA 274
            L +Y T+I  LC +    EA  L + +VS+                      D  +   
Sbjct: 18  TLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVLSG 77

Query: 275 LTYNVLIDGFCRGG--------------KVDRAKKIME-FMKNN---------------G 304
           L    L  GF R                  D  +K++E  MK                 G
Sbjct: 78  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137

Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
              +++ +  LM+ FCK+G ++ A+ VFD +  + L+P  + Y TL+N + R G ++E  
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGF 197

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L   M   G + D+ T+++++ GLC+E K+++A  + +++   G+  N  ++  +++  
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGH 257

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+ G ++ A+E+ + ML +  LP   T N L+  L K G  + A   +  +   G KP+ 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDK 317

Query: 485 DSWALLVELICRGRKLLFAFE 505
            ++  L++  C+   L  AFE
Sbjct: 318 FTYXTLIDGCCKEGDLDTAFE 338



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 60/310 (19%)

Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP-- 272
           +G+  + F  + E K +Q S  ++   S LI    ++G  R+AIE +         +P  
Sbjct: 51  KGSASAVFATILETKGTQRS--DIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFD 108

Query: 273 ---------DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
                      L Y  L+ GF         ++I+E     G   +++ +  LM+ FCK+G
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGF--------YEEILE----CGYPASLYFFNILMHRFCKDG 156

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            ++ A+ VFD +  + L+P  + Y TL+N + R G ++E   L   M   G + D+ T++
Sbjct: 157 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYS 216

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++ GLC+E K+++A  + +++   G+  N  ++  +++  C+ G ++ A+E+ + ML +
Sbjct: 217 VLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
             LP   T N L+  L K G                                    L  A
Sbjct: 277 CLLPDLITYNTLIYGLXKKG-----------------------------------DLKQA 301

Query: 504 FELLDELVIK 513
            +L+DE+ +K
Sbjct: 302 HDLIDEMSMK 311


>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 538

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 210/450 (46%), Gaps = 27/450 (6%)

Query: 68  LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ-MTYETC 126
           L+K +K+   + E FN    +   +H+  T+A +L  L + +KF++ +++LR  +     
Sbjct: 88  LLKIQKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
                +F  L+  +  C    RV +   K               T  +L    N  D   
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFK---------------TFAHLKKFRNATDTFM 192

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
               Y        P     N  +     +G ++ A    +EM++ ++S PN  T + ++ 
Sbjct: 193 QMKDYG-----FLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS-PNTYTLNMVMS 246

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           G C++G+  + IEL ++M  +       ++YN LI G C  G +  A K+   M  NG  
Sbjct: 247 GYCRSGKLDKGIELLQDM-ERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQ 305

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           PNV  + TL++GFC+  KLQEA +VF EMK   L P+T+ Y TLIN + + G  + A   
Sbjct: 306 PNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRF 365

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
            ++M   G + DI+T+N ++ GLC++ K  +A   +++L  + +  N +++  ++   C 
Sbjct: 366 YEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425

Query: 427 KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           +   ++  EL + M+  G  P+  T N L+   CK    + AA  L  +V      +S +
Sbjct: 426 RRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRT 485

Query: 487 WALLVELICRGRKLLFAFELLDELVIKESG 516
               V  +C G       +L+ EL+ +  G
Sbjct: 486 ----VHQVCNGLNHQGKDQLVKELLQEMEG 511


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 164/305 (53%), Gaps = 3/305 (0%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            + P    +N +I    + G +E+A     EM+   +  P++ITY++L++G CK G  +EA
Sbjct: 1221 IMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGL-LPDVITYNSLLNGYCKAGNLKEA 1279

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            + LF ++  +  + P  LTYN+LIDG+CR G ++ A+ + E M   GC PNV  YT LM 
Sbjct: 1280 LLLFGDL-RRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 1338

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            G      L  A+E FDEM +  L+PD   Y T I      G +  A EL + +   G  +
Sbjct: 1339 GSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISS 1398

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            D VT+NI++ GLC+ G +++A  +  K+  +G+  +  +Y  +++  C++G L +A ++ 
Sbjct: 1399 DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIF 1458

Query: 438  RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR- 496
              M+  G LP   T   ++   C+ G    A      ++E G +P   ++ +L+  +CR 
Sbjct: 1459 NNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 1518

Query: 497  GRKLL 501
            GR  L
Sbjct: 1519 GRTQL 1523



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 189/398 (47%), Gaps = 47/398 (11%)

Query: 143  CSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK-YSNQHLRLKPN 201
            C++HE +LE+          +PS+   +T L+  ++  + D     LK    +     PN
Sbjct: 1104 CAVHEEMLEL--------GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPN 1155

Query: 202  TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
               +N++I    ++G LE A E+++ M+ S+ +  +  TY+ LI GL   G  ++  +L 
Sbjct: 1156 DVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA--SSFTYNPLITGLLARGCVKKVYDLQ 1213

Query: 262  EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
             EM   + I+P  +TYN +I G  + G V+ A+     M+  G  P+V  Y +L+NG+CK
Sbjct: 1214 LEM-ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCK 1272

Query: 322  EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
             G L+EA  +F +++   L P  + Y  LI+ +CR G ++EA  L +EM E+GC  ++ T
Sbjct: 1273 AGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCT 1332

Query: 382  FNIILGG--------------------------------LCRE---GKIEEALGMLEKLW 406
            + I++ G                                +C E   G I  A  + E L 
Sbjct: 1333 YTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLM 1392

Query: 407  YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
             +GI  +  +Y I+++  C+ G L+ A EL   M+  G  P   T   L+   C+ G+  
Sbjct: 1393 LEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLR 1452

Query: 467  DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +A      ++  G  P + ++ +++   CR   L  A+
Sbjct: 1453 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAY 1490



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 142/286 (49%), Gaps = 2/286 (0%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            L P    +NILI  +C+ G LE A  +LKE    Q   PN+ TY+ L+ G         A
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             E F+EM+SK  + PD   YN  I      G + RA ++ E +   G + +   Y  L++
Sbjct: 1350 REFFDEMLSKG-LQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIH 1408

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
            G CK G L++AKE+  +M +  L+PD I YT LI+  C  G + EA ++   M   G   
Sbjct: 1409 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 1468

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              VTF +I+   CR G +  A G   K+  +G+  N+ +Y ++++  C+ G  + A    
Sbjct: 1469 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 1528

Query: 438  RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
              ML RG + +  T   L+   CK G  EDA    F + + G  P+
Sbjct: 1529 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPD 1574



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 4/208 (1%)

Query: 198  LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +  +T  +NILI   CK G L+ A E+  +M  + +  P+ ITY+ LI   C+ G  REA
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQ-PDCITYTCLIHAHCERGLLREA 1454

Query: 258  IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             ++F  M+S D +LP A+T+ V+I  +CR G +  A      M   G  PN   Y  L++
Sbjct: 1455 RKIFNNMIS-DGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 1513

Query: 318  GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
              C+ G+ Q A   F EM    L  +   YT LI+  C+ G  ++A+    EM + G   
Sbjct: 1514 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 1573

Query: 378  DIVTFNIILGGLCREGKIEEALGMLEKL 405
            D +T   +L G   +G +   +  L+ +
Sbjct: 1574 DYLTHKALLKGF--DGHVHHTIEYLDNV 1599



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 129/264 (48%), Gaps = 4/264 (1%)

Query: 252  GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM--KNNGCNPNV 309
             R+ +   + EEM+    I P  +TYN L+D F + G+ D+   +++ M  + +GC PN 
Sbjct: 1098 ARWDDICAVHEEMLELG-IEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPND 1156

Query: 310  FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
              Y  ++ G  ++G L+EA E+ + M+    K  +  Y  LI      G V +  +L  E
Sbjct: 1157 VTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLE 1215

Query: 370  MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
            M+  G    +VT+N ++ GL + G +E A     ++   G+  +  +Y  +LN  C+ G 
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 1275

Query: 430  LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
            L++A+ L   +   G  P   T N L+   C+ G  E+A I    + E G  P   ++ +
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335

Query: 490  LVELICRGRKLLFAFELLDELVIK 513
            L++     R L  A E  DE++ K
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSK 1359



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 11/217 (5%)

Query: 300  MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
            M ++G  P+V +   ++       +  +   V +EM    ++P  + Y TL++ F + GR
Sbjct: 1075 MASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGR 1134

Query: 360  VDEALELLKEMKER--GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-- 415
             D+   LLKEM+ R  GC  + VT+N+++ GL R+G +EEA  ++E     G+ L+K   
Sbjct: 1135 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVE-----GMRLSKKAS 1189

Query: 416  --SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
              +Y  ++     +G ++K  +L   M   G +P   T N ++  L ++G+ E A +   
Sbjct: 1190 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 474  GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             +  MG  P+  ++  L+   C+   L  A  L  +L
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDL 1286



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 4/238 (1%)

Query: 261  FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
            F EM S   + PD    N ++       + D    + E M   G  P++  Y TL++ F 
Sbjct: 1072 FREMASHG-VAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFL 1130

Query: 321  KEGKLQEAKEVFDEM--KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
            KEG+  +   +  EM  +     P+ + Y  +I    R G ++EA EL++ M+    KA 
Sbjct: 1131 KEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKAS 1189

Query: 379  IVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
              T+N ++ GL   G +++   +  ++  +GI     +Y  +++   Q G +E A     
Sbjct: 1190 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 439  LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
             M   G LP   T N LL   CKAG  ++A +    L   G  P   ++ +L++  CR
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 214/429 (49%), Gaps = 6/429 (1%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G + +  TY+T+++   + ++F+    VL +M    C  +   +  L+         E  
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171

Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
              F K        P        +N L +S + + A+  L        LKPN  ++  LI
Sbjct: 172 FG-FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD-EMSCAELKPNVVVYANLI 229

Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
               + G  + AF+++KEM  + +  PN ITY  L+ GLCK G+   A  L ++MV +D 
Sbjct: 230 DGFMREGNADEAFKMIKEMVAAGVQ-PNKITYDNLVRGLCKMGQMDRASLLLKQMV-RDS 287

Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
             PD +TYN++I+G  R      A +++  M+N G +PNV+ Y+ +++G C+ G+ ++A 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
           ++ +EM    LKP+   Y  LI+ +CR G V  A E+  +M +     D+  +N ++ GL
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407

Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
            + G++EE+     ++   G+  N+ +Y  +++   + G+LE A +L++ ML  G  P+ 
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 467

Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
               +LL    K+   E  +     +++ G   ++  + +L+  +     +  AF +L E
Sbjct: 468 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSE 527

Query: 510 LVIKESGTI 518
             I+++G++
Sbjct: 528 --IEKNGSV 534



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 211/429 (49%), Gaps = 8/429 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E  G   +  TY  +++ L + ++     A+L +M+    K +  ++ NL+  F      
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 238

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCI 204
           +   +M  ++      +P+       +  L +  Q+D A   LK   Q +R   +P+T  
Sbjct: 239 DEAFKMIKEM-VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK---QMVRDSHRPDTIT 294

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           +N++I+ H +    + AF +L EM+ + +S PN+ TYS +I GLC++G   +A +L EEM
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGIS-PNVYTYSIMIHGLCQSGEPEKASDLLEEM 353

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
            +K  + P+A  Y  LI G+CR G V  A +I + M      P+++ Y +L+ G  K G+
Sbjct: 354 TTKG-LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412

Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
           ++E+ + F +M+   L P+   Y+ LI+ + + G ++ A +L++ M + G K + V +  
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472

Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
           +L    +   IE+     + +   G+ L+   Y I+++     G +E A  +L  +   G
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532

Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
            +P     + L+  LCK    E A   L  + + G  P    +  L++ +C+   + +A 
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592

Query: 505 ELLDELVIK 513
            + + ++ K
Sbjct: 593 NVFNSILAK 601



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 166/313 (53%), Gaps = 2/313 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           L P+    N L+K   +   +   ++V + M  + +S P++ TYSTLI+  CK   F  A
Sbjct: 78  LAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGIS-PDVYTYSTLIEAYCKVREFDTA 136

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++  EM  +   L + +TYNVLI G CR G V+ A    + M++ G  P+ F Y  L+N
Sbjct: 137 KKVLVEMRERGCGL-NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALIN 195

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G CK  +  EAK + DEM    LKP+ + Y  LI+ F R G  DEA +++KEM   G + 
Sbjct: 196 GLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQP 255

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           + +T++ ++ GLC+ G+++ A  +L+++  D    +  +Y +++    +    + A  LL
Sbjct: 256 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLL 315

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M   G  P+  T + ++  LC++G  E A+  L  +   G KP +  +A L+   CR 
Sbjct: 316 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 375

Query: 498 RKLLFAFELLDEL 510
             +  A E+ D++
Sbjct: 376 GNVSLACEIFDKM 388



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 214/448 (47%), Gaps = 14/448 (3%)

Query: 78  ALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
           A E F  + E    G   N  TY  ++  L +  + +    +L+QM  ++ +  + I  N
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHR-PDTITYN 296

Query: 136 LM--KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKY 191
           L+   HF     H    + F  +  +      P++   S  ++ L +S + + A + L+ 
Sbjct: 297 LIIEGHFR----HHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
                 LKPN  ++  LI  +C+ G +  A E+  +M K  +  P+L  Y++LI GL K 
Sbjct: 353 MTTK-GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV-LPDLYCYNSLIFGLSKV 410

Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
           GR  E+ + F +M  +  +LP+  TY+ LI G+ + G ++ A+++++ M + G  PN   
Sbjct: 411 GRVEESTKYFAQMQERG-LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 469

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y  L+  + K   +++    F  M +  +  D   Y  LI+    +G ++ A  +L E++
Sbjct: 470 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529

Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE 431
           + G   D+  ++ ++ GLC+    E+A G+L+++   G+  N   Y  +++  C+ G++ 
Sbjct: 530 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 589

Query: 432 KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
            A  +   +L +G +P+  T   L+   CK G   +A      ++  G  P++  +++L 
Sbjct: 590 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 649

Query: 492 ELICRGRKLLFAFELLDELVIKESGTIQ 519
                   L  A  L++E+ ++   +I 
Sbjct: 650 TGCSSAGDLEQAMFLIEEMFLRGHASIS 677



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 166/326 (50%), Gaps = 23/326 (7%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           I+ ILI +    G +E+AF VL E++K+  S P++  YS+LI GLCK     +A  + +E
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLSEIEKNG-SVPDVHVYSSLISGLCKTADREKAFGILDE 562

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M SK  + P+ + YN LIDG C+ G +  A+ +   +   G  PN   YT+L++G CK G
Sbjct: 563 M-SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 621

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            +  A  +++EM    + PD   Y+ L      AG +++A+ L++EM  RG  A I +FN
Sbjct: 622 DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFN 680

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA----IELLRL 439
            ++ G C+ GK++E L +L  +   G+  N  +   +++   + G+L +     +EL + 
Sbjct: 681 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740

Query: 440 ---------------MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
                          M+ +G +P     ++++   CK G  + A +    +V        
Sbjct: 741 TSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGC 799

Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
            S+  +V+ +CR  KL  A  LL E+
Sbjct: 800 SSYLAIVDNLCRKGKLSEALNLLKEM 825



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 196/417 (47%), Gaps = 50/417 (11%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF---SNC 143
           E  G + N  TY+ ++  L +  + E    +L +MT +  K +  ++  L+  +    N 
Sbjct: 319 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIES-NQVDLAQNFLKY--SNQHLRLKP 200
           SL   + +   K++ +    P L     C N LI   ++V   +   KY    Q   L P
Sbjct: 379 SLACEIFDKMTKVNVL----PDL----YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 430

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEM-----KKSQMSYPNLI---------------- 239
           N   ++ LI  + K G LESA ++++ M     K + + Y +L+                
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490

Query: 240 -------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
                         Y  LI  L  +G    A  +  E + K+  +PD   Y+ LI G C+
Sbjct: 491 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSE-IEKNGSVPDVHVYSSLISGLCK 549

Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
               ++A  I++ M   G +PN+  Y  L++G CK G +  A+ VF+ +    L P+ + 
Sbjct: 550 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 609

Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
           YT+LI+  C+ G +  A  L  EM   G   D   ++++  G    G +E+A+ ++E+++
Sbjct: 610 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 669

Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
             G + + +S+  +++  C++G++++ ++LL +++ RG +P+  T   ++  L +AG
Sbjct: 670 LRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAG 725



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 160/311 (51%), Gaps = 2/311 (0%)

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
            + ++L+  + K G ++ A EV+  M+   ++ P++   + L+  L +        ++ E
Sbjct: 48  AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLA-PSIRCCNALLKDLLRADAMALLWKVRE 106

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            MV    I PD  TY+ LI+ +C+  + D AKK++  M+  GC  N   Y  L+ G C+ 
Sbjct: 107 FMVGAG-ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 165

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G ++EA     +M+++ L PD   Y  LIN  C++ R +EA  LL EM     K ++V +
Sbjct: 166 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 225

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
             ++ G  REG  +EA  M++++   G+  NK +Y  ++   C+ G++++A  LL+ M+ 
Sbjct: 226 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 285

Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
               P   T N ++    +    +DA   L  +   G  P   ++++++  +C+  +   
Sbjct: 286 DSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEK 345

Query: 503 AFELLDELVIK 513
           A +LL+E+  K
Sbjct: 346 ASDLLEEMTTK 356



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 188/416 (45%), Gaps = 64/416 (15%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +++G   N  TY+ ++    +    E+ + ++++M     K ++ I+++L++ +      
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483

Query: 147 ERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
           E+V   F  +    +  +    +     ++ L  S  ++ A   L    ++  + P+  +
Sbjct: 484 EKVSSTFKSMLDQGVMLDN---RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSV-PDVHV 539

Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
           ++ LI   CK    E AF +L EM K  +  PN++ Y+ LIDGLCK+G    A  +F  +
Sbjct: 540 YSSLISGLCKTADREKAFGILDEMSKKGVD-PNIVCYNALIDGLCKSGDISYARNVFNSI 598

Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
           ++K  ++P+ +TY  LIDG C+ G +  A  +   M   G  P+ F Y+ L  G    G 
Sbjct: 599 LAKG-LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 657

Query: 325 LQEAKEVFDEMKNFLLKPDTIG-YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           L++A  + +EM  FL    +I  +  L++ FC+ G++ E L+LL  +  RG   + +T  
Sbjct: 658 LEQAMFLIEEM--FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 715

Query: 384 IILGGL-----------------------------------------------------C 390
            I+ GL                                                     C
Sbjct: 716 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHC 775

Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
           +EG +++AL + + +      +  +SY  +++  C+KG+L +A+ LL+ M  RG L
Sbjct: 776 KEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNL 831



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           + + +I+ HCK G L+ A  +L+++  ++ +     +Y  ++D LC+ G+  EA+ L +E
Sbjct: 766 VVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 824

Query: 264 MVSKDQILP 272
           M  +  + P
Sbjct: 825 MDKRGNLQP 833


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 218/458 (47%), Gaps = 68/458 (14%)

Query: 110 KFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAI 169
           K+E   +V+R+M  +        +  ++ +  N S  E    +F ++     ++  L A 
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEM-----KRGGLVAD 517

Query: 170 STCLNLLIESN-QVDLAQNFLKYSNQ--HLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
                ++++S  +  L +   K+ N+   +   PN   +  LI  + K   +  A E+ +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI---------------- 270
            M  S+   PN++TYS LIDG CK G+  +A ++FE M     +                
Sbjct: 578 TML-SEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSE 636

Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
            P+ + Y  L+DGFC+  +V+ A+K+++ M   GC PN   Y  L++G CK GKL EA+E
Sbjct: 637 RPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 696

Query: 331 VFDEM-----------------KNFLLK------------------PDTIGYTTLINCFC 355
           V  EM                 + F +K                  P+ + YT +I+  C
Sbjct: 697 VKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 756

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           + G+ DEA +L++ M+E+GC+ ++VT+  ++ G  R GKIE  L +LE++   G+  N  
Sbjct: 757 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYV 816

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +YR++++  C+ G L+ A  LL  M    +  H A   +++      G  ++   +L  L
Sbjct: 817 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVI-----EGFNKEFIESLGLL 871

Query: 476 VEMG---FKPESDSWALLVELICRGRKLLFAFELLDEL 510
            E+G     P    + LLV+ + + ++L  A  LL+E+
Sbjct: 872 DEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEV 909



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 216/451 (47%), Gaps = 28/451 (6%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A + FN + E  G   N  TY  ++    + KK    + +   M  E C  +   +  L+
Sbjct: 537 ARKWFNEMREV-GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595

Query: 138 KHFSN-------CSLHERV--------LEMFHKIHPI-TREKPSLKAISTCLNLLIESNQ 181
                       C + ER+        ++M+ K +     E+P++      L+   + ++
Sbjct: 596 DGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHR 655

Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLIT 240
           V+ A+  L   +     +PN  +++ LI   CK G L+ A EV  EM  S+  +P  L T
Sbjct: 656 VEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKAEM--SEHGFPATLYT 712

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           YS+LID   K  R   A ++  +M+ ++   P+ + Y  +IDG C+ GK D A K+M+ M
Sbjct: 713 YSSLIDRYFKVKRQDLASKVLSKML-ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 771

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
           +  GC PNV  YT +++GF + GK++   E+ + M +  + P+ + Y  LI+  C+ G +
Sbjct: 772 EEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 831

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           D A  LL+EMK+         +  ++ G  +E    E+LG+L+++  D      + YR++
Sbjct: 832 DVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSLYRLL 889

Query: 421 LNFSCQKGELEKAIELLR--LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVE 477
           ++   +   LE A+ LL          + + +T N L+  LC A    D A  LF  + +
Sbjct: 890 VDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV-DKAFRLFSEMSK 948

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLD 508
            G  PE  ++  L++ + R  K+  A  LLD
Sbjct: 949 KGVIPEMQTFCSLIKGLFRNSKISEALLLLD 979



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 206/458 (44%), Gaps = 41/458 (8%)

Query: 84  TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM------ 137
           T+ E + F  +   Y  ++  L     FE     L +M   +C  +   +  L+      
Sbjct: 291 TLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--H 195
           K    C   +RVL M      +    PS K  ++ ++    S     A   LK   +  H
Sbjct: 351 KQLGRC---KRVLNMMM----MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 196 LRLKPNTCIFNILIKHHC-KRGTLESAFEVLKEMKKSQMSYP----NLITYSTLIDGLCK 250
               P   ++NILI   C  + +L      L E   S+M       N I  S+    LC 
Sbjct: 404 ---TPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCS 460

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G++ +A  +  EM+ +   +PD  TY+ ++   C   K++ A  + E MK  G   +V+
Sbjct: 461 AGKYEKAFSVIREMIGQG-FIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVY 519

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            YT +++ FCK G +++A++ F+EM+     P+ + YT LI+ + +A +V  A EL + M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKL--------------WYD---GIYLN 413
              GC  +IVT++ ++ G C+ G++E+A  + E++               YD       N
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPN 639

Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
              Y  +L+  C+   +E+A +LL  M   G  P+    + L+  LCK G  ++A     
Sbjct: 640 VVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKA 699

Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + E GF     +++ L++   + ++   A ++L +++
Sbjct: 700 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 737



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/445 (23%), Positives = 187/445 (42%), Gaps = 50/445 (11%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    I +++  + P   +  F     Q G+ H +  Y  ++D + R    +  + +L+
Sbjct: 130 LSESLVIEVLRLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQ 189

Query: 120 QMTYETCKFHEGIFLN-LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
           Q+  +  +   G FLN L++ +         LE   ++                      
Sbjct: 190 QIRDDDKEVF-GEFLNVLVRKYCRSGSFSIALEELGRL---------------------- 226

Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
                          +  R +P+   +N LI+   K   L+SA  V +EM  + +     
Sbjct: 227 ---------------KDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGF 271

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
            T       LCK G++REA+ L E     +  +PD + Y  LI G C     + A   + 
Sbjct: 272 -TLRCYAYSLCKVGKWREALTLME----TENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M+   C PNV  Y+TL+ G   + +L   K V + M      P    + +L++ +C +G
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGK------IEEALGMLEKLWYDGIYL 412
               A +LLK+M + G     V +NI++G +C +        +E A     ++   G+ L
Sbjct: 387 DHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVL 446

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           NK +        C  G+ EKA  ++R M+ +GF+P  +T +++L  LC A   E A +  
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLF 506

Query: 473 FGLVEMGFKPESDSWALLVELICRG 497
             +   G   +  ++ ++V+  C+ 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKA 531



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 137/304 (45%), Gaps = 17/304 (5%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+   +SE  GF     TY++++D+  + K+ +    VL +M   +C  +  I+  ++
Sbjct: 694 AQEVKAEMSEH-GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 752

Query: 138 KHFSNCSLHERVLEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
                    +      +K+  +  EK   P++   +  ++      +++     L+    
Sbjct: 753 DGLCKVGKTDEA----YKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGS 808

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGR 253
              + PN   + +LI H CK G L+ A  +L+EMK  Q  +P +   Y  +I+G   N  
Sbjct: 809 K-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK--QTHWPTHAAGYRKVIEGF--NKE 863

Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN-- 311
           F E++ L +E + +D   P    Y +L+D   +  +++ A +++E +         ++  
Sbjct: 864 FIESLGLLDE-IGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSST 922

Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
           Y +L+   C   K+ +A  +F EM    + P+   + +LI    R  ++ EAL LL  + 
Sbjct: 923 YNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFIS 982

Query: 372 ERGC 375
              C
Sbjct: 983 HMVC 986


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 208/416 (50%), Gaps = 21/416 (5%)

Query: 61  SHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQ 120
           +H   + LI  +K    AL+ F   S+   F H+ +TY  ++ KL  +++F  V  +L +
Sbjct: 14  THERIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDE 73

Query: 121 MTYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR--EKPSLKAISTCLNLLI 177
           M         E IFL +++      +   V+++   +  +TR  + PSLK  ++ L++L+
Sbjct: 74  MPKSIGLPPDESIFLTIIRGLGRARMIRDVIKV---LDLVTRYGKNPSLKIFNSILDVLV 130

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           + + +DLA+ F +       ++ +   + IL+K  C    +   F++L+ +K   +  PN
Sbjct: 131 KED-IDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLK-PN 188

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           ++ Y+TL+  LC NG+   A  L  E+       P+ +T+NVLI G+C+     +A  ++
Sbjct: 189 VVIYNTLLHALCNNGKVGRARSLMNEIKE-----PNDVTFNVLICGYCKEDNFVQALVLL 243

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           E   + G  P+V   T ++   C  G++ EA E+ + +++     D + + TLI  FC+ 
Sbjct: 244 EKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKF 303

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
           G+V     LLKEM+ +GC  +  T+N ++ G C  G +E AL M   +  DGI  N  ++
Sbjct: 304 GKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTF 363

Query: 418 RIVLNFSCQKGELEKAIELLRLM-----LCRGFLPHYATSNELLVRLCKAGMAEDA 468
             ++     +G  E   ++L LM     +C G +  Y   N +L  L +  M  +A
Sbjct: 364 DTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPY---NSVLYGLYRKNMLNEA 416



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 198/404 (49%), Gaps = 44/404 (10%)

Query: 145 LHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
           L  R+ E F  +  I     KP++   +T L+ L  + +V  A++ +    +     PN 
Sbjct: 166 LTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE-----PND 220

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
             FN+LI  +CK      A  VL E   S    P+++T + +++ LC  GR  EA+E+ E
Sbjct: 221 VTFNVLICGYCKEDNFVQAL-VLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILE 279

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            + SK  ++ D + +N LI GFC+ GKV     +++ M+  GC PN   Y  L++GFC+ 
Sbjct: 280 RVESKGGVV-DVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCES 338

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE-RG-CKADIV 380
           G L+ A ++F++MK   +  + + + TLI      GR ++  ++L+ M+E RG C   I 
Sbjct: 339 GMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSIS 398

Query: 381 TFNIILGGL---------------------------------CREGKIEEALGMLEKLWY 407
            +N +L GL                                 C EG I+EA  + +++  
Sbjct: 399 PYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNN 458

Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
           +G   +   Y  +++  CQ+G + +A+EL+  M+  G+ P  +T N L+   C+ G    
Sbjct: 459 EGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGS 518

Query: 468 AAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           A   L  +V  G  P++ S++ L++ +CR +    A  LL ++V
Sbjct: 519 ALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMV 562



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 133/259 (51%), Gaps = 6/259 (2%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +N LI   C+ G LESA ++  +MK   ++  N +T+ TLI GL   GR  +  +
Sbjct: 323 PNADTYNALISGFCESGMLESALDMFNDMKTDGINC-NFVTFDTLIKGLFSRGRTEDGFK 381

Query: 260 LFEEMVSKDQILPDALT-YNVLIDGFCRGGKVDRAKKIMEF-MKNNGCNPNVFNYTTLMN 317
           + E M     +   +++ YN ++ G  R   ++ A   +EF MK     P   + +  + 
Sbjct: 382 ILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEA---LEFLMKMENLFPRAVDRSLRIL 438

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           GFC+EG +QEAK V+D+M N    P  + Y  LI+ FC+ G V EALEL+ EM   G   
Sbjct: 439 GFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFP 498

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
              TFN ++ G CR GK   AL +LE +   G   +  SY  +++  C+K   +KA  LL
Sbjct: 499 VASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLL 558

Query: 438 RLMLCRGFLPHYATSNELL 456
             M+  G  P Y   N L 
Sbjct: 559 LQMVENGITPDYLIWNSLF 577



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 148/284 (52%), Gaps = 6/284 (2%)

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
           N LIK  CK G ++    +LKEM++ +   PN  TY+ LI G C++G    A+++F +M 
Sbjct: 294 NTLIKGFCKFGKVKLGHGLLKEMER-KGCLPNADTYNALISGFCESGMLESALDMFNDM- 351

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTTLMNGFCKEG 323
             D I  + +T++ LI G    G+ +   KI+E M+     C  ++  Y +++ G  ++ 
Sbjct: 352 KTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKN 411

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
            L EA E   +M+N  L P  +  +  I  FC  G + EA  +  +M   G     + ++
Sbjct: 412 MLNEALEFLMKMEN--LFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYD 469

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
            ++ G C+EG + EAL ++ ++ + G +   +++  +++  C+ G+   A++LL  M+ R
Sbjct: 470 CLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGR 529

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
           G +P   + + L+  LC+    + AA  L  +VE G  P+   W
Sbjct: 530 GCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIW 573



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 163/355 (45%), Gaps = 11/355 (3%)

Query: 160 TREKPSLKAIST---CLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
           T   PSL A+ T    ++L+++      A    +++++      +   +  LI       
Sbjct: 4   TTPTPSL-AVPTHERIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFR 62

Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
              +   +L EM KS    P+   + T+I GL +    R+ I++ + +V++    P    
Sbjct: 63  RFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLD-LVTRYGKNPSLKI 121

Query: 277 YNVLIDGFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM 335
           +N ++D   +   +D A+K   + M   G   + + Y  LM G C   ++ E  ++   +
Sbjct: 122 FNSILDVLVKE-DIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVI 180

Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
           K+  LKP+ + Y TL++  C  G+V  A  L+ E+KE     + VTFN+++ G C+E   
Sbjct: 181 KSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNVLICGYCKEDNF 236

Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
            +AL +LEK +  G   +  +   V+   C  G + +A+E+L  +  +G +      N L
Sbjct: 237 VQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTL 296

Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           +   CK G  +     L  +   G  P +D++  L+   C    L  A ++ +++
Sbjct: 297 IKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDM 351



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 7/307 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A+EI   V E KG   +   + T++    ++ K +    +L++M  + C  +   +  L+
Sbjct: 274 AVEILERV-ESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALI 332

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
             F    + E  L+MF+ +        +     T +  L    + +     L+   +   
Sbjct: 333 SGFCESGMLESALDMFNDMK-TDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRG 391

Query: 198 L-KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
           +   +   +N ++    ++  L  A E L +M+     +P  +  S  I G C+ G  +E
Sbjct: 392 VCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENL---FPRAVDRSLRILGFCEEGAIQE 448

Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
           A  ++++M ++  I P AL Y+ LI GFC+ G V  A ++M  M   G  P    +  L+
Sbjct: 449 AKRVYDQMNNEGGI-PSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALI 507

Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
           +GFC+ GK   A ++ ++M      PDT  Y+ LI+  CR     +A  LL +M E G  
Sbjct: 508 SGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGIT 567

Query: 377 ADIVTFN 383
            D + +N
Sbjct: 568 PDYLIWN 574



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 40/281 (14%)

Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
           TY  LI  L    RF     L +EM     + PD   +  +I G  R   +    K+++ 
Sbjct: 50  TYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDL 109

Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
           +   G NP++  + ++++   KE      K    +M    ++ D   Y  L+   C   R
Sbjct: 110 VTRYGKNPSLKIFNSILDVLVKEDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNR 169

Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
           + E  +LL+ +K RG K ++V +N +L  LC  GK+  A  ++ ++              
Sbjct: 170 IGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE------------ 217

Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
                                      P+  T N L+   CK      A + L     +G
Sbjct: 218 ---------------------------PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLG 250

Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQV 520
           F P+  +   +VE++C   ++  A E+L E V  + G + V
Sbjct: 251 FVPDVVTVTKVVEILCNVGRVTEAVEIL-ERVESKGGVVDV 290


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 167/301 (55%), Gaps = 5/301 (1%)

Query: 194 QHLR---LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
           Q LR   +  +  +++ +I   CK   +  A+ +  EM    + +PN+ T+S L+D LCK
Sbjct: 136 QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGI-FPNVYTFSILVDALCK 194

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
           + + ++A+ L   M+ K  + P+ +TY  ++DG+C   +V++A  I   M   G  PNV+
Sbjct: 195 DRKGKQAMNLLAMMMKKG-VKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVW 253

Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
            Y  ++NG CK+ ++ EA  +F EM    + PD + Y  LI+  C+ G++  +LEL+ EM
Sbjct: 254 CYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEM 313

Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
           +  G   DI+T+N +L  LC+   +++A+ +++++   GI  N  +Y  +++  C+ G L
Sbjct: 314 RSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRL 373

Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
           E A  + + +L  G+     T N ++  LCK G+ ++A   L  + +    P++ S+  +
Sbjct: 374 EDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETI 433

Query: 491 V 491
           +
Sbjct: 434 I 434



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 182/357 (50%), Gaps = 9/357 (2%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYET-CKFHEGIFLNLMKHFSNCSLHER 148
           GF  +  +YA +++ L +  +  A   +LR+         +  I  +L K       +  
Sbjct: 110 GFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRL 169

Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
             EM  K        P++   S  ++ L +  +   A N L    +   +KPN   +  +
Sbjct: 170 YSEMIAK-----GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK-GVKPNVVTYGAI 223

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           +  +C    +  A  +   M +  +  PN+  Y+ +I+GLCK  R  EA+ LF+EM  K 
Sbjct: 224 MDGYCLVNQVNKALNIFNVMVQEGVE-PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWK- 281

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
           +I PD +TYN+LIDG C+ GK+  + ++++ M++ G   ++  Y +L++  CK   L +A
Sbjct: 282 KINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQA 341

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
             +  E+K+  ++P+   YTTLI+  C+ GR+++A  + +E+   G    + T+N+++ G
Sbjct: 342 ITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMING 401

Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           LC++G  +EAL +L ++  +    +  SY  ++    +KGE  K  +LL  M+ RG 
Sbjct: 402 LCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 173/346 (50%), Gaps = 34/346 (9%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFRE 256
           +KP+     IL+  +C  G +   F +L ++ K  M Y PN IT++TLI G+C NG+  E
Sbjct: 41  IKPSIVTLTILMNCYCHTGGITFLFSILTKILK--MGYEPNSITFTTLIKGMCLNGQAYE 98

Query: 257 AIELFE-------------------------------EMVSKDQILPDALTYNVLIDGFC 285
           A+   +                               +M+ K  +  D + Y+ +ID  C
Sbjct: 99  ALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLC 158

Query: 286 RGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
           +G  V  A ++   M   G  PNV+ ++ L++  CK+ K ++A  +   M    +KP+ +
Sbjct: 159 KGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVV 218

Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
            Y  +++ +C   +V++AL +   M + G + ++  +NII+ GLC++ +++EA+ + +++
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278

Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
            +  I  +  +Y I+++  C+ G++  ++EL+  M   G      T N LL  LCK    
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338

Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
           + A   +  + + G +P   ++  L++ +C+  +L  A+ +  E++
Sbjct: 339 DQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEIL 384



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 144/310 (46%), Gaps = 39/310 (12%)

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P ++ ++ ++  L K   +  AI LF ++   + I P  +T  +L++ +C  G +     
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQL-EFNGIKPSIVTLTILMNCYCHTGGITFLFS 66

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEG-------------------------------- 323
           I+  +   G  PN   +TTL+ G C  G                                
Sbjct: 67  ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           K+ E +     ++   +  D + Y+T+I+  C+   V +A  L  EM  +G   ++ TF+
Sbjct: 127 KMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           I++  LC++ K ++A+ +L  +   G+  N  +Y  +++  C   ++ KA+ +  +M+  
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246

Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK---PESDSWALLVELICRGRKL 500
           G  P+    N ++  LCK     D A+ LF   EM +K   P+  ++ +L++ +C+  K+
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRV-DEAMNLFK--EMHWKKINPDVVTYNILIDGLCKLGKI 303

Query: 501 LFAFELLDEL 510
             + EL+DE+
Sbjct: 304 STSLELVDEM 313



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 111/240 (46%), Gaps = 3/240 (1%)

Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           P  L +N ++    +      A  +   ++ NG  P++   T LMN +C  G +     +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             ++     +P++I +TTLI   C  G+  EAL     +   G K D V++ I++ GLC+
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G+   A+ ML K W +    +   Y  +++  C+   +  A  L   M+ +G  P+  T
Sbjct: 128 MGETRAAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            + L+  LCK    + A   L  +++ G KP   ++  +++  C   ++  A  + + +V
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 171/309 (55%), Gaps = 6/309 (1%)

Query: 205 FNILIKHHCKRGT-LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
           +N ++   C++G  L++A  +L+ M  +  + P  ++Y+TL+  LC   R  +A+ L  +
Sbjct: 81  YNTVLAALCRQGGCLDAALFLLRVM--AHETRPTAVSYTTLMRALCAERRTGQAVGLLRD 138

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M     + PD +TY  LI G C    VD+A +++  M  +G  PNV  Y+ L+ G+CK G
Sbjct: 139 M-QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAG 197

Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
           + +   +VF+EM    ++PD + YT LI+  CR G+V +A +++ +M ERG + ++VT+N
Sbjct: 198 RWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYN 257

Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
           +++  +C+EG ++EA+ +   +   G+ L+  +Y  ++       E+++A+ LL  M+  
Sbjct: 258 VLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHG 317

Query: 444 GFL--PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             +  P+  T N ++  LCK G    A      + E G      ++ LL+  + R  K+ 
Sbjct: 318 ETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVK 377

Query: 502 FAFELLDEL 510
            A EL+DE+
Sbjct: 378 KAMELMDEM 386



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 178/350 (50%), Gaps = 5/350 (1%)

Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
           +P+  + +T +  L    +   A   L+   Q   ++P+   +  LI+  C    ++ A 
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLR-DMQASGVRPDVVTYGTLIRGLCDAADVDKAV 168

Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
           E+L+EM +S +  PN++ YS L+ G CK GR+    ++FEEM S   I PD + Y  LID
Sbjct: 169 ELLREMCESGIE-PNVVVYSCLLQGYCKAGRWECVSKVFEEM-SGRGIEPDVVMYTGLID 226

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
             CR GKV +A ++M+ M   G  PNV  Y  L+N  CKEG ++EA  + + M    +  
Sbjct: 227 SLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVAL 286

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEM--KERGCKADIVTFNIILGGLCREGKIEEALG 400
           D + Y TLI        +DEA+ LL+EM   E   + ++VTFN ++ GLC+ G++ +A  
Sbjct: 287 DAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQ 346

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           + + +  +G   N  ++ +++    +  +++KA+EL+  M   G  P   T + L+   C
Sbjct: 347 VRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFC 406

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           K    + A   L  +   G +PE   +  L+  +C    +  A    DE+
Sbjct: 407 KMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM 456



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 201/398 (50%), Gaps = 5/398 (1%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           +  G   +  TY T++  L      +    +LR+M     + +  ++  L++ +      
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
           E V ++F ++     E P +   +  ++ L    +V  A   +    +   L+PN   +N
Sbjct: 200 ECVSKVFEEMSGRGIE-PDVVMYTGLIDSLCREGKVKKATQVMDKMMER-GLEPNVVTYN 257

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +LI   CK G+++ A  +   M +  ++  + +TY+TLI GL       EA+ L EEM+ 
Sbjct: 258 VLINSMCKEGSVKEAMSLRNNMLEKGVAL-DAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 267 KDQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            + ++ P+ +T+N +I G C+ G++ +A ++ + M  NGC  N+  +  L+ G  +  K+
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 326 QEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNII 385
           ++A E+ DEM +  L+PD+  Y+ LIN FC+  +VD A  LL +M+  G + ++V +  +
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436

Query: 386 LGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
           L  LC +G +E+A    +++ +    L+  +Y  +++ +C+  + + A E L+ ML  G 
Sbjct: 437 LAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495

Query: 446 LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
           +P   T + L+     +G    A   L  +   GF P+
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPD 533



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 191/377 (50%), Gaps = 22/377 (5%)

Query: 76  QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGI 132
           +C  ++F  +S  +G   +   Y  ++D L R  K +    V+ +M     E       +
Sbjct: 200 ECVSKVFEEMS-GRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258

Query: 133 FLNLM-KHFS---NCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
            +N M K  S     SL   +LE    +  +T        + T L+ ++E   +D A   
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVT-----YNTLITGLSGVLE---MDEAMGL 310

Query: 189 LK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
           L+   +    ++PN   FN +I   CK G +  AF+V ++M        NL+T++ LI G
Sbjct: 311 LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQV-RDMMAENGCACNLVTFNLLIGG 369

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           L +  + ++A+EL +EM S   + PD+ TY++LI+GFC+  +VDRA+ ++  M+ +G  P
Sbjct: 370 LLRVHKVKKAMELMDEMASSG-LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEP 428

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
            + +Y  L+   C++G +++A+  FDEM KN   K D + Y+T+I+  CR      A E 
Sbjct: 429 ELVHYIPLLAALCEQGMMEQARNFFDEMHKN--CKLDVVAYSTMIHGACRLRDRKSAEEF 486

Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
           LK M + G   D VT+++++      G +  A  +L+++   G   + A +  ++     
Sbjct: 487 LKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGA 546

Query: 427 KGELEKAIELLRLMLCR 443
           KG+ EK +EL+R M  +
Sbjct: 547 KGDTEKVLELIREMTAK 563



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 135/244 (55%), Gaps = 2/244 (0%)

Query: 273 DALTYNVLIDGFCR-GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
           DA++YN ++   CR GG +D A  ++  M +    P   +YTTLM   C E +  +A  +
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
             +M+   ++PD + Y TLI   C A  VD+A+ELL+EM E G + ++V ++ +L G C+
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
            G+ E    + E++   GI  +   Y  +++  C++G+++KA +++  M+ RG  P+  T
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            N L+  +CK G  ++A      ++E G   ++ ++  L+  +    ++  A  LL+E++
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 512 IKES 515
             E+
Sbjct: 316 HGET 319



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 94/174 (54%), Gaps = 4/174 (2%)

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           QVD A++ L    +   ++P    +  L+   C++G +E A     EM K+     +++ 
Sbjct: 410 QVDRAESLLSKMRRD-GIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN--CKLDVVA 466

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           YST+I G C+  R R++ E F + +  + ++PD++TY++LI+ F   G +  A+++++ M
Sbjct: 467 YSTMIHGACRL-RDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQM 525

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
             +G  P+V  + +L+ G+  +G  ++  E+  EM    +  D+   +T+  C 
Sbjct: 526 TASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCL 579


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 178/345 (51%), Gaps = 3/345 (0%)

Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
           T ++ L +  +V   QN L+  +    + P+   +N+LI    K G  + A   L+E + 
Sbjct: 271 TVMSFLCKEKRVADVQNLLERMSD-AGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEG 329

Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
            +      + YS  +   C NGR  EA E+  EM+SK    PD +TY+ ++DGFCR G++
Sbjct: 330 KRFRVDE-VGYSATVHSFCLNGRMAEAKEIIGEMISKG-CRPDVVTYSAVVDGFCRIGEL 387

Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
           D+A+K+M+ M  NGC PN   +T L+NG CK GK  EA E+ ++ +     P  I Y+ +
Sbjct: 388 DQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVV 447

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           ++ F R G++ E+ +++ +M ++G     V  N+++  LC E K  +A   +E+    G 
Sbjct: 448 MHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGC 507

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
           ++N  ++  V++   ++G+LE A+ LL  M      P   T   ++  L + G  ++A  
Sbjct: 508 FINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATS 567

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
            +  ++  G  P   ++  ++   C    +     LLD+++ KE 
Sbjct: 568 LVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEG 612



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 190/394 (48%), Gaps = 10/394 (2%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E F     Q  + H    +  +L  L+R +  +    V+R M           F +LM
Sbjct: 109 AFEFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLM 168

Query: 138 KHFSNCSLHE---RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
             +S         RVL++  K        P +   +  +N+L+ + ++D A  F +   +
Sbjct: 169 LSYSRAGKLRSAMRVLQLMQK----DGCAPDICICNMAVNVLVVAGRIDKALEFAERM-R 223

Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
            + + P+   +N LIK  C    +  A E++  M ++    P+ I+Y T++  LCK  R 
Sbjct: 224 RVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNG-CLPDKISYFTVMSFLCKEKRV 282

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            +   L E M S   I PD +TYN+LI G  + G  D A   +   +      +   Y+ 
Sbjct: 283 ADVQNLLERM-SDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSA 341

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
            ++ FC  G++ EAKE+  EM +   +PD + Y+ +++ FCR G +D+A +++K M + G
Sbjct: 342 TVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNG 401

Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
           CK + VT   +L GLC+ GK  EA  +L K   +    +  +Y +V++   ++G+L+++ 
Sbjct: 402 CKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESC 461

Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
           +++  ML +GF P     N L+  LC      DA
Sbjct: 462 DVVMQMLQKGFFPTTVEINLLIHALCNERKPADA 495



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 165/310 (53%), Gaps = 2/310 (0%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           P+ CI N+ +      G ++ A E  + M++  +  P+++TY+ LI GLC   R  +A+E
Sbjct: 194 PDICICNMAVNVLVVAGRIDKALEFAERMRRVGVD-PDVVTYNCLIKGLCGARRIVDALE 252

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           +   M+ ++  LPD ++Y  ++   C+  +V   + ++E M + G  P+   Y  L++G 
Sbjct: 253 MISSML-QNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGL 311

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
            K G   EA     E +    + D +GY+  ++ FC  GR+ EA E++ EM  +GC+ D+
Sbjct: 312 AKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDV 371

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           VT++ ++ G CR G++++A  M++ ++ +G   N  ++  +LN  C+ G+  +A ELL  
Sbjct: 372 VTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNK 431

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
                + P   T + ++    + G  +++   +  +++ GF P +    LL+  +C  RK
Sbjct: 432 SEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERK 491

Query: 500 LLFAFELLDE 509
              A + +++
Sbjct: 492 PADAKDFMEQ 501



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 200/459 (43%), Gaps = 50/459 (10%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           IS+   +S +  EK       +   +S+  G   +  TY  ++  LA++   +   + LR
Sbjct: 267 ISYFTVMSFLCKEKRVADVQNLLERMSD-AGIFPDQVTYNMLIHGLAKHGHADEALSFLR 325

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLI 177
           +   +  +  E  +   +  F    L+ R+ E    I  +  +  +P +   S  ++   
Sbjct: 326 ESEGKRFRVDEVGYSATVHSFC---LNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFC 382

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
              ++D A+  +K+  ++   KPNT     L+   CK G    A+E+L + ++   + P+
Sbjct: 383 RIGELDQARKMMKHMYKN-GCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWT-PS 440

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
            ITYS ++ G  + G+ +E+ ++  +M+ K    P  +  N+LI   C   K   AK  M
Sbjct: 441 AITYSVVMHGFRREGKLKESCDVVMQMLQKG-FFPTTVEINLLIHALCNERKPADAKDFM 499

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEG---------------------------------- 323
           E  ++ GC  NV N+TT+++GF ++G                                  
Sbjct: 500 EQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRK 559

Query: 324 -KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM--KERGCKADIV 380
            K++EA  + ++M N  L P  + Y T+I+ +C  G V++ L LL +M  KE    A   
Sbjct: 560 GKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSSA--- 616

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
            +N ++  LC  GK+ EA  +L K+       +  +  I+++    +G   ++  +   M
Sbjct: 617 -YNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRM 675

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
             R  +P      ++  +L  AG  + A   +   VE G
Sbjct: 676 FQRNLIPDLKLCQKVDSQLALAGEKQAAGKLIIKFVERG 714



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 16/264 (6%)

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           +  ++R A E+F+EM+             VL+    R    D A+++M  M   G     
Sbjct: 118 RQWKYRHAPEVFDEML-------------VLLS---RTRLHDPARRVMRLMIRRGMPRGT 161

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             +  LM  + + GKL+ A  V   M+     PD       +N    AGR+D+ALE  + 
Sbjct: 162 RQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAER 221

Query: 370 MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGE 429
           M+  G   D+VT+N ++ GLC   +I +AL M+  +  +G   +K SY  V++F C++  
Sbjct: 222 MRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKR 281

Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
           +     LL  M   G  P   T N L+  L K G A++A   L       F+ +   ++ 
Sbjct: 282 VADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSA 341

Query: 490 LVELICRGRKLLFAFELLDELVIK 513
            V   C   ++  A E++ E++ K
Sbjct: 342 TVHSFCLNGRMAEAKEIIGEMISK 365


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
            +P+   +  LI   CK G   +A  +L  M +     PN+  Y+T+ID LCK+ +  EA
Sbjct: 129 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ-PNVFAYNTIIDSLCKDRQVTEA 187

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF EMV+K  I PD  TYN LI   C   +      ++  M ++   P+V ++ T+++
Sbjct: 188 FNLFSEMVTKG-ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 246

Query: 318 GFCKEGKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
             CKEGK+ EA +V D+M +     P+ I Y TLIN +C+  R+D+A+ L  EM  +   
Sbjct: 247 ALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI 306

Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
            D VT++ ++ GLC   ++++A+ +  ++       N  +YRI+L++ C+   L +A+ L
Sbjct: 307 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 366

Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
           L+ +      P    +N  +  +C+AG  E A      L   G +P+  ++++++  +CR
Sbjct: 367 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 426

Query: 497 GRKLLFAFELLDEL 510
              L  A +L  E+
Sbjct: 427 RGLLDEASKLFREM 440



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 163/321 (50%), Gaps = 9/321 (2%)

Query: 193 NQHLRLKP--NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC- 249
           N+ LR++P  +T  FN L+    K     +   +  +M    +  PN+ T   LI+  C 
Sbjct: 50  NRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIP-PNIYTLHILINSFCH 108

Query: 250 -KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
              G+  EA+ LF++M+  +   PD +TY  LI+G C+ G    A +++  M    C PN
Sbjct: 109 LNRGKIGEALHLFDKMIG-EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPN 167

Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
           VF Y T+++  CK+ ++ EA  +F EM    + PD   Y +LI+  C          LL 
Sbjct: 168 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 227

Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL-NKASYRIVLNFSCQK 427
           EM +     D+V+FN ++  LC+EGK+ EA  +++K+   G  + N  SY  ++N  C+ 
Sbjct: 228 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 428 GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFG-LVEMGFKPESDS 486
             ++KA+ L   M  +  +P   T + L+  LC     +D AIALF  +V     P   +
Sbjct: 288 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD-AIALFHEMVACSQIPNLVT 346

Query: 487 WALLVELICRGRKLLFAFELL 507
           + +L++ +C+ R L  A  LL
Sbjct: 347 YRILLDYLCKNRYLAEAMALL 367



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 187/404 (46%), Gaps = 34/404 (8%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK----FHEGIF 133
           AL +F+ +  + GF  +  TY T+++ L +     A   +L  M  + C+     +  I 
Sbjct: 117 ALHLFDKMIGE-GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 175

Query: 134 LNLMKHFSNCSLHERVLEMFHK-IHPITREKPSL----------KAISTCLNLLIESNQV 182
            +L K            EM  K I P      SL          K ++T LN +++S   
Sbjct: 176 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS--- 232

Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
                         ++ P+   FN ++   CK G +  A +V+ +M +     PN+I+Y+
Sbjct: 233 --------------KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYN 278

Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
           TLI+G CK  R  +A+ LF EM  + +++PD +TY+ LI G C   ++  A  +   M  
Sbjct: 279 TLINGYCKIQRIDKAMYLFGEMC-RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 337

Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
               PN+  Y  L++  CK   L EA  +   ++   L PD       I+  CRAG ++ 
Sbjct: 338 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 397

Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
           A +L   +  +G + D+ T++I++ GLCR G ++EA  +  ++  +G  LN   Y  +  
Sbjct: 398 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 457

Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
              +  E  +AI+LL+ M+ RGF    +T    +  L   G+ +
Sbjct: 458 GFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQ 501



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 160/328 (48%), Gaps = 5/328 (1%)

Query: 189 LKYSNQHLRLKPNTCIFNILIKHHC--KRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
           L +      + PN    +ILI   C   RG +  A  +  +M       P+++TY TLI+
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFR-PDVVTYGTLIN 141

Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
           GLCK G    AI L   MV K+   P+   YN +ID  C+  +V  A  +   M   G +
Sbjct: 142 GLCKVGNTSAAIRLLGSMVQKN-CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 200

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
           P++F Y +L++  C   + +    + +EM +  + PD + + T+++  C+ G+V EA ++
Sbjct: 201 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 260

Query: 367 LKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
           + +M +RG C  +++++N ++ G C+  +I++A+ +  ++    +  +  +Y  +++  C
Sbjct: 261 VDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 320

Query: 426 QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
               L+ AI L   M+    +P+  T   LL  LCK     +A   L  +      P+  
Sbjct: 321 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 380

Query: 486 SWALLVELICRGRKLLFAFELLDELVIK 513
              + ++ +CR  +L  A +L   L  K
Sbjct: 381 VNNIAIDGMCRAGELEAARDLFSNLSSK 408



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 189/383 (49%), Gaps = 4/383 (1%)

Query: 56  RSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
           R   +++G  I+ +        A+ +  ++  QK    N   Y TI+D L + ++     
Sbjct: 130 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMV-QKNCQPNVFAYNTIIDSLCKDRQVTEAF 188

Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
            +  +M  +        + +L+    N    + V  + +++   ++  P + + +T ++ 
Sbjct: 189 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD-SKIMPDVVSFNTVVDA 247

Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
           L +  +V  A + +    Q     PN   +N LI  +CK   ++ A  +  EM + ++  
Sbjct: 248 LCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL-I 306

Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
           P+ +TYSTLI GLC   R ++AI LF EMV+  QI P+ +TY +L+D  C+   +  A  
Sbjct: 307 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI-PNLVTYRILLDYLCKNRYLAEAMA 365

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           +++ ++ +  +P++      ++G C+ G+L+ A+++F  + +  L+PD   Y+ +IN  C
Sbjct: 366 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 425

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
           R G +DEA +L +EM E GC  +   +N I  G  R  +   A+ +L+++   G   + +
Sbjct: 426 RRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAS 485

Query: 416 SYRIVLNFSCQKGELEKAIELLR 438
           +  + +      G  +   ++LR
Sbjct: 486 TMTLFVKMLSDDGLDQSLKQILR 508



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 2/207 (0%)

Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA--GRVDEAL 364
           P+  ++  L+    K         +  +M +F + P+      LIN FC    G++ EAL
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
            L  +M   G + D+VT+  ++ GLC+ G    A+ +L  +       N  +Y  +++  
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
           C+  ++ +A  L   M+ +G  P   T N L+  LC     +  A  L  +V+    P+ 
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
            S+  +V+ +C+  K+  A +++D+++
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMI 265


>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
 gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
          Length = 388

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 172/347 (49%), Gaps = 42/347 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + PN  IFN ++    + G L+ A   L+ M+K+  + P+ +TY+TLID   K  RF  A
Sbjct: 7   VAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCN-PDEVTYNTLIDVFHKLERFDSA 65

Query: 258 IELFEEMVSKDQILPDAL--TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
            EL E+M     I P  +  TYN +I  FC    V +AK I+E M ++GC P+V  Y TL
Sbjct: 66  RELLEQMWDS-GIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTL 124

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM----- 370
           ++G CK   L+ A +    M+     P+TI Y T+IN   R+ +  EA  LL EM     
Sbjct: 125 ISGLCK---LRRADDALQLMREMEPAPNTITYNTVINGLWRSRKDTEAQALLDEMISVGC 181

Query: 371 ------------------------------KERGCKADIVTFNIILGGLCREGKIEEALG 400
                                         +++ C+AD VTF  ++ G  R+ ++E+A G
Sbjct: 182 PFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLEDAGG 241

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
            L+ +   GI  +  SY  +LN  C +G  +KA E+  LM+ RG+ P   + N LL  LC
Sbjct: 242 TLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLC 301

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
           KA   E A +    + E   +P+  S+  +++ +C  R++  A +L 
Sbjct: 302 KALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLF 348



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 184/382 (48%), Gaps = 46/382 (12%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           + G N +  TY T++D   + ++F++   +L QM      +  GI   +M    N     
Sbjct: 39  KAGCNPDEVTYNTLIDVFHKLERFDSARELLEQM------WDSGIRPGVMAETYN----- 87

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
            V+  F ++  + + K         L L+I+S                   KP+   +N 
Sbjct: 88  NVIASFCEVCNVRKAK-------GILELMIDSG-----------------CKPDVVTYNT 123

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI   CK    + A ++++EM+ +    PN ITY+T+I+GL ++ +  EA  L +EM+S 
Sbjct: 124 LISGLCKLRRADDALQLMREMEPA----PNTITYNTVINGLWRSRKDTEAQALLDEMISV 179

Query: 268 DQILPDAL-TYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
               P ++ TYN +I   CR  ++++A  +  +M+   C  +   + TL++GF ++ +L+
Sbjct: 180 G--CPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLE 237

Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
           +A    D M    +  D   YT L+N  C  G   +A E+   M +RG    +V++N++L
Sbjct: 238 DAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLL 297

Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
            GLC+  ++E AL +  ++    I  +  SY  V+   C    +++AI+L R      FL
Sbjct: 298 KGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFR---DPSFL 354

Query: 447 -PHYATSNELLVRLCKAGMAED 467
            P+  T   L + L K+G  ED
Sbjct: 355 EPNDITHETLRIGLEKSGRLED 376



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 126/247 (51%), Gaps = 5/247 (2%)

Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
           M+    + P+ + +N +++GF R G +D A   +  M+  GCNP+   Y TL++ F K  
Sbjct: 1   MILGGAVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFHKLE 60

Query: 324 KLQEAKEVFDEMKNFLLKPDTIG--YTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
           +   A+E+ ++M +  ++P  +   Y  +I  FC    V +A  +L+ M + GCK D+VT
Sbjct: 61  RFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVT 120

Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
           +N ++ GLC+  + ++AL ++ ++       N  +Y  V+N   +  +  +A  LL  M+
Sbjct: 121 YNTLISGLCKLRRADDALQLMREM---EPAPNTITYNTVINGLWRSRKDTEAQALLDEMI 177

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G     +T N ++  LC++   E A      + +   + +  ++A LV+   R ++L 
Sbjct: 178 SVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLE 237

Query: 502 FAFELLD 508
            A   LD
Sbjct: 238 DAGGTLD 244



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 6/238 (2%)

Query: 94  NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMF 153
           N  TY T+++ L R +K     A+L +M    C F    +  ++ +       E+ +++F
Sbjct: 149 NTITYNTVINGLWRSRKDTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVF 208

Query: 154 HKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
             +     E   +   +T ++  +   +++ A   L +  +   +  +   +  L+   C
Sbjct: 209 LYMRKKKCEADEV-TFATLVDGFLRDKRLEDAGGTLDWMARA-GIPSDVKSYTKLLNALC 266

Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
            RG+ + A E+   M     + P L++Y+ L+ GLCK  R   A+ LF EM  + +I PD
Sbjct: 267 DRGSAQKACEIFNLMVDRGYA-PTLVSYNVLLKGLCKALRVEHALVLFREMQER-EIQPD 324

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
            ++Y  +I G C   ++D A  +  F   +   PN   + TL  G  K G+L++   V
Sbjct: 325 VVSYTTVIKGLCAARRIDEAIDL--FRDPSFLEPNDITHETLRIGLEKSGRLEDYSSV 380


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 201/427 (47%), Gaps = 12/427 (2%)

Query: 59  FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
           F+S     S+I+    PQ     F   S  K F    +    I D L      E     L
Sbjct: 56  FLSPKIVTSIIQNPPNPQLGFRFFIWASNFKRFRAWESC-DLITDLLINQNGLELYCQTL 114

Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
             +     K H   F  L+K +    L ++ +E F  +       P +   +  L++LI+
Sbjct: 115 EALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDC-TPDVYTYNMILDVLIQ 173

Query: 179 SNQVDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
            N + LA   L    + ++L   PN   F+ILI   CK G ++ A  +  EM +  +  P
Sbjct: 174 KNFLLLA---LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGI-LP 229

Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ-ILPDALTYNVLIDGFCRGGKVDRAKK 295
           +  TY  +I GLC++ R  +A  LF++M  KD  + PD +T N L++GFC   +VD A  
Sbjct: 230 DAFTYCVVISGLCRSKRVDDAYRLFDKM--KDSGVGPDFVTCNALLNGFCMLDRVDEAFS 287

Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
           ++   + +G   +V  Y+ L+ G  +  + ++ + ++ +M    +KPD   YT ++    
Sbjct: 288 LLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLA 347

Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
            AG+V +ALELL EM E G   D V +N+++ G C  G + EA  +  ++     + N  
Sbjct: 348 EAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVK 407

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           +Y I+++  C+ G    A E+   M   G  P   T N L+  LCK G  E A + LF  
Sbjct: 408 TYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHL-LFYK 466

Query: 476 VEMGFKP 482
           +E+G  P
Sbjct: 467 MEIGRNP 473



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 209/453 (46%), Gaps = 65/453 (14%)

Query: 87  EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
           E+ G+  +   Y+ ++  L R K++E V  + R+M  +  K    ++  +MK  +     
Sbjct: 293 EKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKV 352

Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              LE+                    LN + ES  V                 P+T  +N
Sbjct: 353 RDALEL--------------------LNEMTESGVV-----------------PDTVCYN 375

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
           +LIK  C  G L  A  +  E+ +    +PN+ TYS LI G+C+NG  R+A E+F EM  
Sbjct: 376 VLIKGFCDMGLLSEARSLQLEISRHD-CFPNVKTYSILISGMCRNGLTRDAQEIFNEM-E 433

Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF--------------NY 312
           K    P A+T+N LIDG C+ G++++A  ++ +    G NP++F              + 
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAH-LLFYKMEIGRNPSLFLRLSQGPSHVLDSASL 492

Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
             ++   C  G + +A  +  ++ +    P    Y  L+N FC+ G  + A +L +EM+ 
Sbjct: 493 QKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQF 552

Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
           +G   D VT+  ++ GL R  + E+A  + +++  +G   + A YR ++ + C++ EL +
Sbjct: 553 KGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPR 612

Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGM-AEDAAIALFGLVEMGFKPES---DSWA 488
           A  L        +L +  +  +  ++  +     ++   A+ GL+EM FK        +A
Sbjct: 613 AFSLW-----LKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYA 667

Query: 489 LLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
           + +  +C+ R++  A ++   L+++E   +  P
Sbjct: 668 IWLIGLCQTRRVGEALKIF--LILEEYKVVITP 698



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 167/338 (49%), Gaps = 5/338 (1%)

Query: 174 NLLIESNQVDL-AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
           +LLI  N ++L  Q      N  +++  +   F +LIK + K G  + A E    M+   
Sbjct: 99  DLLINQNGLELYCQTLEALKNGGIKVHNDA--FFVLIKVYLKMGLTDKAMETFGSMRDFD 156

Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
            + P++ TY+ ++D L +      A+ ++  M+ K   LP+  T+++LIDG C+ G V  
Sbjct: 157 CT-PDVYTYNMILDVLIQKNFLLLALTVYTRMM-KLNCLPNVATFSILIDGLCKSGNVKD 214

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A  + + M   G  P+ F Y  +++G C+  ++ +A  +FD+MK+  + PD +    L+N
Sbjct: 215 ALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLN 274

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
            FC   RVDEA  LL+  ++ G   D+  ++ ++ GL R  + E+   +  K+  D +  
Sbjct: 275 GFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKP 334

Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
           +   Y I++    + G++  A+ELL  M   G +P     N L+   C  G+  +A    
Sbjct: 335 DVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQ 394

Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             +      P   ++++L+  +CR      A E+ +E+
Sbjct: 395 LEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEM 432


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 165/316 (52%), Gaps = 2/316 (0%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
           L   P     + L++   ++G +  AF+++  +KK   + P+L  Y+ LI+ LCK+G+F 
Sbjct: 325 LGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG-AMPSLFVYNALINSLCKDGKFD 383

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA  LF+EM  K     D +TY++LID FCR GK+D A   +  M   G    V+ Y +L
Sbjct: 384 EAELLFKEMGEKGLCAND-VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NG CK G L  A   FDEM +  LKP  + YT+LI+ +C  G++ EA  L  EM  +G 
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGI 502

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
             +  TF  ++  L R  ++ +A  + +++    +  N+ +Y +++   C++G   KA E
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFE 562

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           LL  M+ +G +P   T   L+  LC  G   +A   +  L    FK     ++ L+   C
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC 622

Query: 496 RGRKLLFAFELLDELV 511
           +  +L  A  +  E+V
Sbjct: 623 KEGRLRDALGVCREMV 638



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 22/451 (4%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           AL  FN +   K FNH+  ++  ++  L     F    ++L+ +          +F  L+
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 138 KHFSNCS----------LHERVLE--MFHK--IHPITRE---KPSLKAISTCLNLLIESN 180
             F  C           +   V E  MF    I  + R+    P ++ +   LN L +  
Sbjct: 148 DCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIR 207

Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
           +VD+    L      + ++P+  I+  +I+  C+      A E+++ M+ S +   N++ 
Sbjct: 208 RVDMVL-VLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL---NVVV 263

Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
           Y+ LI GLCKN R  EA+E+   ++ K  +    +TY  L+ G C+  + +    +M+ M
Sbjct: 264 YNVLIHGLCKNKRVWEAVEIKNGLIQKG-LTASEVTYCTLVLGLCKVQEFEVGAGVMDEM 322

Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
              G  P     ++L+ G  ++GK+ +A ++ + +K     P    Y  LIN  C+ G+ 
Sbjct: 323 IELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKF 382

Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
           DEA  L KEM E+G  A+ VT++I++   CR GK++ A+  L K+   GI +    Y  +
Sbjct: 383 DEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442

Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
           +N  C+ G L  A+     M+ +G  P   +   L+   C  G   +A      +   G 
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGI 502

Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELV 511
            P + ++  L+  + R  ++  AF L DE++
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEML 533



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 168/314 (53%), Gaps = 2/314 (0%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           LKP    +  LI  +C +G L  AF +  EM    ++ PN  T++TLI  L +  R  +A
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIA-PNTYTFTTLISALFRANRMTDA 525

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
             LF+EM+ ++ ++P+ +TYNV+I+G C+ G   +A +++  M   G  P+ + Y  L++
Sbjct: 526 FRLFDEMLEQN-MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLIS 584

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C  G++ EAK+  D++     K + + Y+ L++ +C+ GR+ +AL + +EM +RG   
Sbjct: 585 SLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDM 644

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
           D+V + +++ G  +E       G+L+ +    +  +K  Y  +++   + G ++KA  + 
Sbjct: 645 DLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIW 704

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
            +M+  G  P+  T   L+  LCKAG+ + A +    ++     P   ++   ++ + R 
Sbjct: 705 DIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLARE 764

Query: 498 RKLLFAFELLDELV 511
             +  A +L ++++
Sbjct: 765 GSMEKAVQLHNDML 778



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 213/463 (46%), Gaps = 44/463 (9%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           +KG   N+ TY+ ++D   R  K +     L +M     K     + +L+          
Sbjct: 394 EKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLS 453

Query: 148 RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIF 205
             +  F ++  I +  KP++ + ++ ++     N+  L + F  Y     + + PNT  F
Sbjct: 454 AAVSFFDEM--IDKGLKPTVVSYTSLISGY--CNKGKLHEAFRLYHEMTGKGIAPNTYTF 509

Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
             LI    +   +  AF +  EM +  M  PN +TY+ +I+G CK G   +A EL  +MV
Sbjct: 510 TTLISALFRANRMTDAFRLFDEMLEQNM-MPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568

Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
            K  ++PD  TY  LI   C  G+V  AKK ++ +       N   Y+ L++G+CKEG+L
Sbjct: 569 QKG-LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRL 627

Query: 326 --------------------------------QEAKEVFDEMKNF---LLKPDTIGYTTL 350
                                           Q+   VF  +KN     L+PD + YT++
Sbjct: 628 RDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSM 687

Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
           I+ + +AG V +A  +   M + GC  +IVT+  ++  LC+ G +++A  + +++     
Sbjct: 688 IDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNS 747

Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
             N  +Y   L+   ++G +EKA++L   ML +G L +  + N L+   CK G  E+A  
Sbjct: 748 TPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATK 806

Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            L  +++    P+  +++ ++   CR   L  A E  D ++ K
Sbjct: 807 LLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNK 849



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 187/403 (46%), Gaps = 74/403 (18%)

Query: 151 EMFHKIHPITRE--KPSLKAISTCLNLLIESNQV-DLAQNFLKYSNQHLRLKPNTCIFNI 207
           E F   H +T +   P+    +T ++ L  +N++ D  + F +   Q++   PN   +N+
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMM--PNEVTYNV 546

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQM-----SYPNLIT---------------------- 240
           +I+ HCK G    AFE+L +M +  +     +Y  LI+                      
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606

Query: 241 -------YSTLIDGLCKNGRFREAIELFEEMVSK-------------------------- 267
                  YS L+ G CK GR R+A+ +  EMV +                          
Sbjct: 607 FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVF 666

Query: 268 -------DQIL-PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
                  DQ L PD + Y  +IDG+ + G V +A  I + M + GC PN+  YTTL+N  
Sbjct: 667 GLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINEL 726

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           CK G + +A+ ++ EM      P+ + Y   ++   R G +++A++L  +M  +G  A+ 
Sbjct: 727 CKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANT 785

Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
           V++NI++ G C+ G++EEA  +L+++  + I+ +  +Y  ++   C++G L+ AIE    
Sbjct: 786 VSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDT 845

Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
           ML +G  P     N L+   C AG    A      ++  G KP
Sbjct: 846 MLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKP 888



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 138/251 (54%), Gaps = 6/251 (2%)

Query: 171 TCLNLLIESN--QVDLAQNFLKYSNQH-LRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
            C  +LI+    + D +  F    N H  RL+P+  I+  +I  + K G+++ AF +   
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706

Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
           M     + PN++TY+TLI+ LCK G   +A  L++EM+  +   P+ +TY   +D   R 
Sbjct: 707 MIDEGCT-PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNST-PNHVTYCCFLDHLARE 764

Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
           G +++A ++   M   G   N  +Y  L+ GFCK G+++EA ++ DEM +  + PD I Y
Sbjct: 765 GSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITY 823

Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
           +T+I   CR G +D A+E    M  +G K D + +N ++ G C  G++ +A  + + +  
Sbjct: 824 STIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIR 883

Query: 408 DGIYLNKASYR 418
            G+  N+A+++
Sbjct: 884 RGVKPNQATHK 894



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 3/196 (1%)

Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
           PN   +  LI   CK G ++ A  + KEM  S  S PN +TY   +D L + G   +A++
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSN-STPNHVTYCCFLDHLAREGSMEKAVQ 772

Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
           L  +M+    +L + ++YN+L+ GFC+ G+V+ A K+++ M +N   P+   Y+T++   
Sbjct: 773 LHNDMLKG--LLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQC 830

Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
           C+ G L  A E +D M N  LKPDT+ Y  LI   C AG + +A EL  +M  RG K + 
Sbjct: 831 CRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQ 890

Query: 380 VTFNIILGGLCREGKI 395
            T   +  G  R+  I
Sbjct: 891 ATHKSLSHGASRKFSI 906



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 114/243 (46%), Gaps = 7/243 (2%)

Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
           +L +++LI  + +  ++  +  I   M+     P V     ++NG  K  ++     +F 
Sbjct: 158 SLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFG 217

Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
           E+ +  ++PD   Y  +I  FC      +A E+++ M+      ++V +N+++ GLC+  
Sbjct: 218 EILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESS--DLNVVVYNVLIHGLCKNK 275

Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
           ++ EA+ +   L   G+  ++ +Y  ++   C+  E E    ++  M+  GF+P  A  +
Sbjct: 276 RVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALS 335

Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
            L+  L + G   DA   +  + ++G  P    +  L+  +C+  K   A     EL+ K
Sbjct: 336 SLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEA-----ELLFK 390

Query: 514 ESG 516
           E G
Sbjct: 391 EMG 393


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 214/453 (47%), Gaps = 47/453 (10%)

Query: 96  ATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFSNCSLHERVL 150
           +++  +L  LA+ K +  V  +  QM     + + C  +  I LN +     C+++ RV 
Sbjct: 97  SSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLN--ILLNCL-----CNVN-RVG 148

Query: 151 EMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
           E    +  I R    P +   +T +  L   +++  A   L    Q L   PN   +  L
Sbjct: 149 EGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA-LLFTRMQKLGCTPNAITYGTL 207

Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSY-----PNLITYSTLIDGLCKNGRFREAIELFEE 263
           +K  C+ G +  A ++ +EM      Y     P +I+YS +ID LCK+ R  EA +LFEE
Sbjct: 208 MKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEE 267

Query: 264 M--------------------------VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           M                          +    + P+ +T+NVLID  C+ GKV  AK ++
Sbjct: 268 MKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL 327

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
           E M   G  PN+  Y +L+ GFC  G L  A+E+F  M +   +PD I YT LIN +C+ 
Sbjct: 328 EVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKT 387

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
            +V+EA++L   M + G + D+ T+  +L GL + GK+ +A  +   +   GI  +   Y
Sbjct: 388 SKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 447

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I LN  C+ G L +A+EL   +            N L+  LCKAG  E A      L +
Sbjct: 448 GIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 507

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
              +P+  ++ +++   CRG +++ A  L  ++
Sbjct: 508 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKM 540



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 172/345 (49%), Gaps = 27/345 (7%)

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQM-----SY--------------- 235
           +  KP    ++I+I   CK    + A ++ +EMK   M     SY               
Sbjct: 236 INFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEM 295

Query: 236 ------PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
                 PN++T++ LID LCK G+  EA +L E M+ +  I+P+ LTYN LI+GFC  G 
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG-IVPNLLTYNSLIEGFCLVGD 354

Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
           ++ A+++   M + GC P+V  YT L+NG+CK  K++EA ++++ M     +PD   Y  
Sbjct: 355 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 414

Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           L+    + G+V +A +L   MK  G   D+  + I L GLC+ G + EA+ +  KL    
Sbjct: 415 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 474

Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
           I L+   +  +++  C+ G+LE A EL   +      P   T N ++   C+ G    A 
Sbjct: 475 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 534

Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           I    + + G  P+  ++A L+      +KL    ELL  +V ++
Sbjct: 535 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRD 579



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 159/336 (47%), Gaps = 37/336 (11%)

Query: 211 HHCKRGTLES--AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
           H+CK G + +  AF+    M  S  + P L +++ L+ GL K   + +   L+ +M    
Sbjct: 68  HNCKTGNITAIQAFQFFHLMMYSNPT-PPLSSFTHLLSGLAKIKHYSQVFYLYNQM-RLS 125

Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
            I PD  T N+L++  C   +V     +M  +   G  P++  YTTL+ G C E ++ +A
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185

Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC------KADIVTF 382
             +F  M+     P+ I Y TL+   CR G +  AL+L +EM           K  ++++
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245

Query: 383 NIILGGLCREGKIEEALGMLEK----------------LWYD-----------GIYLNKA 415
           +II+  LC++ + +EA  + E+                +W +           G+  N  
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVV 305

Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
           ++ ++++  C++G++ +A +LL +M+ RG +P+  T N L+   C  G    A      +
Sbjct: 306 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365

Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
              G +P+   + +L+   C+  K+  A +L + ++
Sbjct: 366 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 401



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 21/310 (6%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  +FN +  Q G   N  T+  ++D L +  K      +L  M         GI  NL+
Sbjct: 288 AKRLFNEMVNQ-GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM------IQRGIVPNLL 340

Query: 138 KH------FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
            +      F          E+F  + P    +P +   +  +N   ++++V+ A   +K 
Sbjct: 341 TYNSLIEGFCLVGDLNSARELFVSM-PSKGCEPDVICYTVLINGYCKTSKVEEA---MKL 396

Query: 192 SNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLC 249
            N  L++  +P+   +  L+    + G +  A ++   MK   +   +L  Y   ++GLC
Sbjct: 397 YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIP-GDLYIYGIFLNGLC 455

Query: 250 KNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNV 309
           KNG   EA+ELF ++ S + I  D   +N LIDG C+ GK++ A ++ E +      P+V
Sbjct: 456 KNGCLFEAMELFNKLKSYN-IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDV 514

Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
             Y  +++ FC+ G++ +A  +F +M+     PD I Y TLI  F  + ++++ +ELL  
Sbjct: 515 VTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHM 574

Query: 370 MKERGCKADI 379
           M +R    D+
Sbjct: 575 MVQRDVSLDV 584



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 31/231 (13%)

Query: 285 CRGGKVD--RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           C+ G +   +A +    M  +   P + ++T L++G  K     +   ++++M+   + P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
           D      L+NC C   RV E L ++  +  RG   DIVT+  ++ GLC E +I +A  + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
            ++   G   N  +Y  ++   C+ G +  A++L + ML                     
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEML--------------------- 228

Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
               D+  +L+G+    FKP   S++++++ +C+ R+   A +L +E+ ++
Sbjct: 229 ---NDS--SLYGI---NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ 271


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 212/476 (44%), Gaps = 51/476 (10%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A  ++ T+ E  G      T+ T+LD   +    E VD +  +M     +F E  +  L+
Sbjct: 222 ASAVYETMIEH-GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILI 280

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN-QVDLAQNFLKYSNQHL 196
             FS     E       + H   R +          N LIE   +  L  +    +++ L
Sbjct: 281 NGFSKNGKMEEA----RRFHGDMR-RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335

Query: 197 R--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
              + P T  +NI I   C  G ++ A E+L     S M+ P++++Y+TL+ G  K G+F
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELL-----SSMAAPDVVSYNTLMHGYIKMGKF 390

Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
            EA  LF+++ + D I P  +TYN LIDG C  G ++ A+++ E M      P+V  YTT
Sbjct: 391 VEASLLFDDLRAGD-IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449

Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
           L+ GF K G L  A EV+DEM    +KPD   YTT      R G  D+A  L +EM    
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509

Query: 375 CKA-DIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-------------YLNKASYRIV 420
             A D+  +N+ + GLC+ G + +A+    K++  G+             YL    +++ 
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569

Query: 421 LNF----------------------SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
            N                         + G LE+A +    M  RG  P+  T N LL  
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629

Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
           +CKAG  ++A   L  + E G  P   S+ +L+   C   K     +L  E++ KE
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 151/299 (50%), Gaps = 36/299 (12%)

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
           + P+   +N LI   C+ G LE A + LKE   +Q+ +P++ITY+TL+ G  KNG    A
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGA-QRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463

Query: 258 IELF-----------------------------------EEMVSKDQILPDALTYNVLID 282
            E++                                   EEMV+ D   PD   YNV ID
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523

Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
           G C+ G + +A +    +   G  P+   YTT++ G+ + G+ + A+ ++DEM    L P
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583

Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
             I Y  LI    +AGR+++A +   EMK+RG + +++T N +L G+C+ G I+EA   L
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643

Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
            K+  +GI  NK SY ++++ +C   + E+ ++L + ML +   P   T   L   L K
Sbjct: 644 CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 7/284 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
           PS++  +  L +L +S  ++ A    +   +H  + P    FN ++    K G LE   +
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEH-GIMPTVITFNTMLDSCFKAGDLERVDK 259

Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
           +  EMK+  + +   +TY+ LI+G  KNG+  EA     +M  +        ++N LI+G
Sbjct: 260 IWLEMKRRNIEFSE-VTYNILINGFSKNGKMEEARRFHGDM-RRSGFAVTPYSFNPLIEG 317

Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
           +C+ G  D A  + + M N G  P    Y   +   C  G++ +A+E+   M      PD
Sbjct: 318 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APD 373

Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
            + Y TL++ + + G+  EA  L  +++       IVT+N ++ GLC  G +E A  + E
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433

Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
           ++    I+ +  +Y  ++    + G L  A E+   ML +G  P
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 139/281 (49%), Gaps = 8/281 (2%)

Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESA 221
           P +   +T +   +++  + +A       ++ LR  +KP+   +        + G  + A
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVY---DEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498

Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
           F + +EM  +    P+L  Y+  IDGLCK G   +AIE F+  + +  ++PD +TY  +I
Sbjct: 499 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE-FQRKIFRVGLVPDHVTYTTVI 557

Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
            G+   G+   A+ + + M      P+V  Y  L+ G  K G+L++A +   EMK   ++
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617

Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
           P+ + +  L+   C+AG +DEA   L +M+E G   +  ++ +++   C   K EE + +
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677

Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL-RLML 441
            +++    I  +  ++R +     +K    + +E L RL+L
Sbjct: 678 YKEMLDKEIEPDGYTHRALFK-HLEKDHESREVEFLERLLL 717



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 119/253 (47%), Gaps = 5/253 (1%)

Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
           FE+M+ K   LP     N+++        +++A  + E M  +G  P V  + T+++   
Sbjct: 191 FEKMIRKG-FLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249

Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
           K G L+   +++ EMK   ++   + Y  LIN F + G+++EA     +M+  G      
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309

Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
           +FN ++ G C++G  ++A G+ +++   GIY   ++Y I +   C  G ++ A ELL  M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369

Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
                 P   + N L+    K G   +A++    L      P   ++  L++ +C    L
Sbjct: 370 AA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425

Query: 501 LFAFELLDELVIK 513
             A  L +E+  +
Sbjct: 426 EGAQRLKEEMTTQ 438



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 5/258 (1%)

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           +A  ++E M+ +  I+P  +T+N ++D   + G ++R  KI   MK      +   Y  L
Sbjct: 221 KASAVYETMI-EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279

Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
           +NGF K GK++EA+    +M+          +  LI  +C+ G  D+A  +  EM   G 
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339

Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
                T+NI +  LC  G+I++A  +L  +    +     SY  +++   + G+  +A  
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDV----VSYNTLMHGYIKMGKFVEASL 395

Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
           L   +      P   T N L+  LC++G  E A      +      P+  ++  LV+   
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455

Query: 496 RGRKLLFAFELLDELVIK 513
           +   L  A E+ DE++ K
Sbjct: 456 KNGNLSMATEVYDEMLRK 473


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 170/304 (55%), Gaps = 6/304 (1%)

Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDG 247
            LK  NQ   + PN   FN+LI  +CK   + +A +V +EM++  +   N++TY++L+ G
Sbjct: 248 LLKEMNQA-GISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIP-ANMVTYTSLVSG 305

Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
           LC+ G+  ++++L EEM  ++  L    T N +++GFC+ G +  A+  ++ M   G  P
Sbjct: 306 LCREGKVEDSMKLVEEM--EELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKP 363

Query: 308 NVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELL 367
           NV  Y TL++G+ + GK++EA      M    + PD   Y  LI  F  +        LL
Sbjct: 364 NVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLL 423

Query: 368 KEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQK 427
            EMKE G KAD+VT+N+++G LC +G++ +A+ +L+++   G+     +Y  ++N  C+K
Sbjct: 424 DEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEK 483

Query: 428 GELEKAIEL-LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
           G+ + A ++ +R+  C+    +  T N  L   CK G  ++A + L  ++E G  P   +
Sbjct: 484 GDAKGAHDIRIRMEKCKK-RANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRIT 542

Query: 487 WALL 490
           + ++
Sbjct: 543 YEII 546



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 186/345 (53%), Gaps = 40/345 (11%)

Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
           R +PS  +++  L  L+ +++VDLA+   + +    R+ P+   FNI+I   CK G L  
Sbjct: 148 RYRPSAFSVNALLAALVRADRVDLAERAFR-AALRRRVSPDKFTFNIVISGLCKTGQLRK 206

Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA--IELFEEMVSKDQILPDALTYN 278
           A +V K+M+   +  P+++TY+TLIDG  K GR  +   +++  + +++  I P+ +T+N
Sbjct: 207 AGDVAKDMRGWGL-MPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFN 265

Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
           VLI+G+C+   +  A K+ E M+ +G   N+  YT+L++G C+EGK++++ ++ +EM+  
Sbjct: 266 VLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEEL 325

Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
            L        +++N FC+ G + EA   +  M ++G K ++VT+N ++ G  R GK++EA
Sbjct: 326 GLATLPT-LNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEA 384

Query: 399 L-----------------------------------GMLEKLWYDGIYLNKASYRIVLNF 423
                                               G+L+++   G+  +  +Y +++  
Sbjct: 385 TAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGA 444

Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
            C KGE+ KA++LL  M+  G  P + T N ++   C+ G A+ A
Sbjct: 445 LCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGA 489



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 189/374 (50%), Gaps = 10/374 (2%)

Query: 145 LHERVLEMFHKIHPITREKPS----LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP 200
           LH       H    I R  P+    L A    L L   S  +     FL     + R +P
Sbjct: 92  LHALAAGRLHSPASILRALPASSRPLVADMLVLALARASQPLAAYGAFLLAGADYPRYRP 151

Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
           +    N L+    +   ++ A    +   + ++S P+  T++ +I GLCK G+ R+A ++
Sbjct: 152 SAFSVNALLAALVRADRVDLAERAFRAALRRRVS-PDKFTFNIVISGLCKTGQLRKAGDV 210

Query: 261 FEEMVSKDQILPDALTYNVLIDGF---CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            ++M     ++P  +TYN LIDG+    R GK+     +++ M   G +PNV  +  L+N
Sbjct: 211 AKDMRGWG-LMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLIN 269

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
           G+CKE  +  A +VF+EM+   +  + + YT+L++  CR G+V+++++L++EM+E G  A
Sbjct: 270 GYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGL-A 328

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
            + T N +L G C++G + EA G ++ +   G+  N  +Y  +++   + G++++A    
Sbjct: 329 TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAK 388

Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
             M  +G  P   T N L+     +      +  L  + E G K +  ++ +L+  +C  
Sbjct: 389 GAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCK 448

Query: 498 RKLLFAFELLDELV 511
            ++  A +LLDE+V
Sbjct: 449 GEVRKAVKLLDEMV 462



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 164/346 (47%), Gaps = 16/346 (4%)

Query: 90  GFNHNNATYATILD---KLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHF---SNC 143
           G   +  TY T++D   K  R  K   VD +L++M       +   F  L+  +   SN 
Sbjct: 218 GLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNI 277

Query: 144 SLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-HLRLKPNT 202
           +   +V E   + H I     ++   ++ ++ L    +V+ +   ++   +  L   P  
Sbjct: 278 TAAIKVFEEMRQ-HGI---PANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPT- 332

Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
              N ++   CK+G +  A   +  M +  M  PN++TY+TLIDG  + G+ +EA     
Sbjct: 333 --LNSVLNGFCKKGMMVEAEGWVDGMAQKGMK-PNVVTYNTLIDGYQRLGKMKEATAAKG 389

Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            M  K  I PD  TYN LI GF           +++ MK  G   ++  Y  L+   C +
Sbjct: 390 AMAGKG-ISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCK 448

Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
           G++++A ++ DEM    L+P    Y  +IN FC  G    A ++   M++   +A++VT 
Sbjct: 449 GEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTC 508

Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
           N+ L   C+ GK++EA  +L ++   G+  N+ +Y I+ +   +KG
Sbjct: 509 NVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKG 554



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 145/313 (46%), Gaps = 5/313 (1%)

Query: 88  QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
           Q G + N  T+  +++   +     A   V  +M       +   + +L+         E
Sbjct: 254 QAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVE 313

Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
             +++  ++  +     +L  +++ LN   +   +  A+ ++    Q   +KPN   +N 
Sbjct: 314 DSMKLVEEMEELGLA--TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQK-GMKPNVVTYNT 370

Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
           LI  + + G ++ A      M    +S P++ TY+ LI G   +  +R    L +EM  +
Sbjct: 371 LIDGYQRLGKMKEATAAKGAMAGKGIS-PDVKTYNCLITGFTTSTDWRSVSGLLDEM-KE 428

Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
             +  D +TYNVLI   C  G+V +A K+++ M   G  P    Y  ++NGFC++G  + 
Sbjct: 429 TGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKG 488

Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
           A ++   M+    + + +     +  FC+ G++DEA  +L EM E+G   + +T+ II  
Sbjct: 489 AHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINS 548

Query: 388 GLCREGKIEEALG 400
           G+  +G + +  G
Sbjct: 549 GMIEKGYVPDIRG 561



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 104/259 (40%), Gaps = 39/259 (15%)

Query: 71  CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE 130
           C+K      E +     QKG   N  TY T++D   R  K +   A    M  +      
Sbjct: 341 CKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDV 400

Query: 131 GIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLK 190
             +  L+  F+  +                      +++S  L+ + E+           
Sbjct: 401 KTYNCLITGFTTST--------------------DWRSVSGLLDEMKETG---------- 430

Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
                  +K +   +N+LI   C +G +  A ++L EM +  +  P   TY+ +I+G C+
Sbjct: 431 -------VKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLE-PKHRTYNAIINGFCE 482

Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
            G  + A ++   M  K +   + +T NV +  FC+ GK+D A  ++  M   G  PN  
Sbjct: 483 KGDAKGAHDIRIRM-EKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRI 541

Query: 311 NYTTLMNGFCKEGKLQEAK 329
            Y  + +G  ++G + + +
Sbjct: 542 TYEIINSGMIEKGYVPDIR 560



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 7/185 (3%)

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
           +P       L+    RA RVD A    +    R    D  TFNI++ GLC+ G++ +A  
Sbjct: 150 RPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGD 209

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE---LLRLMLCRGFLPHYATSNELLV 457
           + + +   G+  +  +Y  +++   + G   K      LL+ M   G  P+  T N L+ 
Sbjct: 210 VAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLIN 269

Query: 458 RLCKAGMAEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
             CK      AAI +F  + + G      ++  LV  +CR  K+  + +L++E+  +E G
Sbjct: 270 GYCKESNIT-AAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEM--EELG 326

Query: 517 TIQVP 521
              +P
Sbjct: 327 LATLP 331


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 218/454 (48%), Gaps = 8/454 (1%)

Query: 60  ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
           +S    + ++K   +P  AL  F ++SE     H   T   +L+ L  + K E + AV  
Sbjct: 87  VSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFE 146

Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLI 177
            M  +  +     +L + K  S   +   + +M   ++ + +    L A S    ++LLI
Sbjct: 147 FMQKKIIRRDLDTYLTIFKALS---IRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
           +S     A    +       LKP+   ++ L+    K+   E    +LKEM+   +  PN
Sbjct: 204 QSGFCGEALEVYRRMVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLR-PN 261

Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
           + T++  I  L + G+  EA E+F  M   +   PD +TY VLID  C  G+++ AK++ 
Sbjct: 262 VYTFTICIRVLGRAGKIDEAYEIFRRM-DDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
             MK NG  P+   Y TL++ F   G L   KE + +M+     PD + +T L++  C+A
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
              DEA      M+++G   ++ T+N ++ GL R G+IE+AL +L  +   G+     +Y
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440

Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
            I +++  + GE  KA+E    M  +G +P+    N  L  L + G   +A     GL E
Sbjct: 441 NIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
            G  P+S ++ ++++   +  ++  A  LL E++
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 146  HERVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNT 202
            H+R L  +      T++    P+L + +  +  L+E +  + A +  K   +++   P+ 
Sbjct: 765  HKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK-DMKNVGCAPDA 823

Query: 203  CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
              FN+L+  H K G +   FE+ KEM  S+   P+ ITY+ +I  L K+    +A++ F 
Sbjct: 824  FTFNMLLAVHGKSGKITELFELYKEMI-SRRCKPDAITYNIVISSLAKSNNLDKALDFFY 882

Query: 263  EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
            ++VS D   P   TY  LIDG  + G+++ A ++ E M + GC PN   +  L+NG+ K 
Sbjct: 883  DLVSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 323  GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
            G  + A ++F  M N  ++PD   YT L++C C AGRVDEAL    E+K  G   D + +
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 383  NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR-IVLNFSCQKGELEKAIELLRLML 441
            N I+ GL +  ++EEAL +  ++   GI  +  +Y  ++LN     G +E+A  +   + 
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA-GMVEQAKRMYEELQ 1060

Query: 442  CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
              G  P   T N L+     +   E A      ++  G  P   ++A L
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 220/470 (46%), Gaps = 44/470 (9%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           ALE++  +  + G   +  TY+ ++  L + +  E V  +L++M     + +   F   +
Sbjct: 211 ALEVYRRMVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICI 269

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKY-SNQH 195
           +        +   E+F ++       P L   +  ++ L  + Q++ A+  F+K  +N H
Sbjct: 270 RVLGRAGKIDEAYEIFRRMDD-EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328

Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
              KP+  I+  L+      G L++  E   +M+ +    P+++T++ L+D LCK   F 
Sbjct: 329 ---KPDQVIYITLLDKFNDFGDLDTFKEFWSQME-ADGYMPDVVTFTILVDVLCKARDFD 384

Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
           EA   F+ M  K  ILP+  TYN LI G  R G+++ A K++  M++ G  P  + Y   
Sbjct: 385 EAFATFDVM-RKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443

Query: 316 MNGFCKE-----------------------------------GKLQEAKEVFDEMKNFLL 340
           ++ F K                                    G+L+EAK +F+ ++   L
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503

Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
            PD++ Y  ++ C+ + G+VDEA+ LL EM   GC+ D++  N ++  L + G+++EA  
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563

Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
           M +++    +     +Y  +L+   ++G ++KAIEL   M+ +   P+  + N LL   C
Sbjct: 564 MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFC 623

Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
           K    E A      +  M  KP+  ++  ++  + +  K+  AF    +L
Sbjct: 624 KNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 160/306 (52%), Gaps = 3/306 (0%)

Query: 186  QNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLI 245
            Q F K++ + L + P    +N LI    +    E A+++ K+MK    + P+  T++ L+
Sbjct: 773  QIFDKFTKK-LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA-PDAFTFNMLL 830

Query: 246  DGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
                K+G+  E  EL++EM+S+ +  PDA+TYN++I    +   +D+A      + ++  
Sbjct: 831  AVHGKSGKITELFELYKEMISR-RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889

Query: 306  NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
             P    Y  L++G  K G+L+EA  +F+EM ++  KP+   +  LIN + + G  + A +
Sbjct: 890  RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949

Query: 366  LLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSC 425
            L K M   G + D+ ++ I++  LC  G+++EAL    +L   G+  +  +Y  ++N   
Sbjct: 950  LFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLG 1009

Query: 426  QKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD 485
            +   +E+A+ L   M  RG +P   T N L++ L  AGM E A      L   G +P+  
Sbjct: 1010 KSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVF 1069

Query: 486  SWALLV 491
            ++  L+
Sbjct: 1070 TYNALI 1075



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 202/462 (43%), Gaps = 45/462 (9%)

Query: 90  GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
           G   +   Y T+LDK   +   +       QM  +        F  L+         +  
Sbjct: 327 GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386

Query: 150 LEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
              F     + R++   P+L   +T +  L+ + +++ A   L  + + + ++P    +N
Sbjct: 387 FATFD----VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLG-TMESVGVQPTAYTYN 441

Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMS-------------------------------- 234
           I I +  K G    A E  ++MK   +                                 
Sbjct: 442 IFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 235 --YPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDR 292
              P+ +TY+ ++    K G+  EA+ L  EM+ ++   PD +  N LID   + G+VD 
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI-RNGCEPDVIVVNSLIDSLYKAGRVDE 560

Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
           A ++ + MK+   +P V  Y TL++G  KEG++Q+A E+F+ M      P+TI + TL++
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620

Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
           CFC+   V+ AL++  +M    CK D++T+N ++ GL +E K+  A     +L    ++ 
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHP 679

Query: 413 NKASYRIVLNFSCQKGELEKAIELLR-LMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
           +  +   +L    + G++  AI + R  M    F  + +   +L+         + A I 
Sbjct: 680 DHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIF 739

Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
              LV  G   E      LV ++C+ ++ L+A+++ D+   K
Sbjct: 740 AEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/477 (22%), Positives = 213/477 (44%), Gaps = 14/477 (2%)

Query: 39   KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
            + D   +  D   D +     +++   +S +  E   Q A+E+F ++ E+K  + N  ++
Sbjct: 557  RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKC-SPNTISF 615

Query: 99   ATILDKLARYKKFEAVDAVLRQMTYETCK----FHEGIFLNLMKHFSNCSLHERVLEMFH 154
             T+LD   +  + E    +  +MT   CK     +  +   L+K         +V   F 
Sbjct: 616  NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE-------NKVNHAFW 668

Query: 155  KIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHC 213
              H + +   P    I T L  L++  Q+  A +  +     +R + N   +  L+    
Sbjct: 669  FFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728

Query: 214  KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
                ++ A    +E+  + +   +      L+  LCK+ R   A ++F++   K  I P 
Sbjct: 729  VEAEMDKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKRELYAYQIFDKFTKKLGISPT 787

Query: 274  ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
              +YN LI         ++A  + + MKN GC P+ F +  L+    K GK+ E  E++ 
Sbjct: 788  LASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYK 847

Query: 334  EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
            EM +   KPD I Y  +I+   ++  +D+AL+   ++     +    T+  ++ GL + G
Sbjct: 848  EMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVG 907

Query: 394  KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
            ++EEA+ + E++   G   N A + I++N   + G+ E A +L + M+  G  P   +  
Sbjct: 908  RLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYT 967

Query: 454  ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
             L+  LC AG  ++A      L   G  P+  ++  ++  + + +++  A  L +E+
Sbjct: 968  ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 163/348 (46%), Gaps = 6/348 (1%)

Query: 78   ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
            A +IF+  +++ G +   A+Y  ++ +L      E    + + M    C      F  L+
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 138  KHFSNCSLHERVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL 196
                       + E++ ++  I+R  KP     +  ++ L +SN +D A +F  Y     
Sbjct: 831  AVHGKSGKITELFELYKEM--ISRRCKPDAITYNIVISSLAKSNNLDKALDFF-YDLVSS 887

Query: 197  RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
              +P    +  LI    K G LE A  + +EM       PN   ++ LI+G  K G    
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK-PNCAIFNILINGYGKIGDTET 946

Query: 257  AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
            A +LF+ MV+ + I PD  +Y +L+D  C  G+VD A      +K+ G +P+   Y  ++
Sbjct: 947  ACQLFKRMVN-EGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005

Query: 317  NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
            NG  K  +++EA  +++EM+N  + PD   Y +L+     AG V++A  + +E++  G +
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 377  ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
             D+ T+N ++ G       E A  + + +  DG   N  +Y  + N S
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 181/370 (48%), Gaps = 45/370 (12%)

Query: 181 QVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
           QVD A N L   ++ +R   +P+  + N LI    K G ++ A+++   MK  ++S P +
Sbjct: 522 QVDEAVNLL---SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLS-PTV 577

Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
           +TY+TL+ GL K GR ++AIELFE M+ K +  P+ +++N L+D FC+  +V+ A K+  
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIEK-KCSPNTISFNTLLDCFCKNDEVELALKMFS 636

Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
            M    C P+V  Y T++ G  KE K+  A   F ++K  +  PD +   TL+    + G
Sbjct: 637 KMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSM-HPDHVTICTLLPGLVKCG 695

Query: 359 RVDEALELLKE-MKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA-- 415
           ++ +A+ + ++ M +   + +   +  ++GG   E ++++A+   E+L  +GI    +  
Sbjct: 696 QIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFL 755

Query: 416 ---------------SYRI-------------VLNFSCQKGEL------EKAIELLRLML 441
                          +Y+I             + +++C  GEL      EKA +L + M 
Sbjct: 756 IPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK 815

Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
             G  P   T N LL    K+G   +       ++    KP++ ++ +++  + +   L 
Sbjct: 816 NVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLD 875

Query: 502 FAFELLDELV 511
            A +   +LV
Sbjct: 876 KALDFFYDLV 885


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/518 (23%), Positives = 230/518 (44%), Gaps = 76/518 (14%)

Query: 67  SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
           ++++ + + + AL+ F     Q  + H+   Y ++L+ L++ K  +    VL  M     
Sbjct: 179 AVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGI 238

Query: 127 KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQ 186
                 F  +M  +S        L++   +     E P+L   +T +++ + +N+++ A 
Sbjct: 239 YRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVE-PNLLICNTTIDVFVRANRLEKAL 297

Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL--------------------- 225
            FL+   Q + + PN   +N +I+ +C    +E A E+L                     
Sbjct: 298 RFLE-RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356

Query: 226 --------------KEMKKSQMSYPNLITYSTLID------------------------- 246
                         K+M K     P+ +TY+TLI                          
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416

Query: 247 ----------GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
                      LCK GR  EA +L  EM       PD +TY  +++GFCR G+VD+AKK+
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEM----DCPPDVVTYTAVVNGFCRLGEVDKAKKL 472

Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
           ++ M  +G  PN  +YT L+NG C+ GK  EA+E+ +  +     P++I Y+ +++   R
Sbjct: 473 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 532

Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
            G++ EA ++++EM  +G     V  N++L  LCR+G+  EA   +E+    G  +N  +
Sbjct: 533 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 592

Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
           +  V++  CQ  EL+ A+ +L  M          T   L+  L K G   +A   +  ++
Sbjct: 593 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 652

Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
             G  P   ++  ++   C+  K+     +L++++ ++
Sbjct: 653 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 690



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 141/332 (42%), Gaps = 42/332 (12%)

Query: 78  ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
           A E+ N +SE+  ++ N+ TY+ I+  L R  K      V+R+M  +   F   + +NL+
Sbjct: 504 AREMMN-MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF-FPGPVEINLL 561

Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
                             +    R   + K +  CLN     N V+              
Sbjct: 562 ---------------LQSLCRDGRTHEARKFMEECLNKGCAINVVN-------------- 592

Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
                  F  +I   C+   L++A  VL +M      + ++ TY+TL+D L K GR  EA
Sbjct: 593 -------FTTVIHGFCQNDELDAALSVLDDMYLIN-KHADVFTYTTLVDTLGKKGRIAEA 644

Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
            EL ++M+ K  I P  +TY  +I  +C+ GKVD    I+E M +      ++N   ++ 
Sbjct: 645 TELMKKMLHKG-IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYN--QVIE 701

Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
             C  GKL+EA  +  ++     + D      L+  + + G    A ++   M  R    
Sbjct: 702 KLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 761

Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
           D+     +   L  +GK++EA  ++ +L   G
Sbjct: 762 DVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 793


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.138    0.411 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,686,400,266
Number of Sequences: 23463169
Number of extensions: 307631069
Number of successful extensions: 985554
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8567
Number of HSP's successfully gapped in prelim test: 4737
Number of HSP's that attempted gapping in prelim test: 751838
Number of HSP's gapped (non-prelim): 74879
length of query: 521
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 374
effective length of database: 8,910,109,524
effective search space: 3332380961976
effective search space used: 3332380961976
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)