BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009977
(521 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 576 bits (1484), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/461 (58%), Positives = 354/461 (76%)
Query: 51 VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
V+ +++FISH +A+SL+K E++PQ L+IFN S+QKGFNHNNATY+ +LD L R+KK
Sbjct: 45 VETNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKK 104
Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
F AVDA+L QM YETC+F E +FLNLM+HFS LH++V+EMF+ I I R KPSL AIS
Sbjct: 105 FLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIS 164
Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
TCLNLLI+S +V+L++ L Y+ +L L+PNTCIFNIL+KHHCK G + AF V++EMK+
Sbjct: 165 TCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKR 224
Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
S +SYPN ITYSTL+D L + R +EA+ELFE+M+SK+ I PD +T+NV+I+GFCR G+V
Sbjct: 225 SGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEV 284
Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
+RAKKI++FMK NGCNPNV+NY+ LMNGFCK GK+QEAK+ FDE+K LK DT+GYTTL
Sbjct: 285 ERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344
Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
+NCFCR G DEA++LL EMK C+AD +T+N+IL GL EG+ EEAL ML++ +G+
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGV 404
Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
+LNK SYRI+LN C GELEKA++ L +M RG PH+AT NEL+VRLC++G E
Sbjct: 405 HLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVR 464
Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
L G + +G P SW +VE IC+ RKL+ FELLD LV
Sbjct: 465 VLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 233/446 (52%), Gaps = 13/446 (2%)
Query: 55 KRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ--KGFNHNNATYATILDKLARYKKFE 112
K S+ I+ I L++ EK+ + ++ +F++ + + G+ H+ +++ ++ +L KF+
Sbjct: 9 KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68
Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
A + ++ +M E C E I L++ + + L +FHK+ + PS KA T
Sbjct: 69 AAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCD-PSQKAYVTV 127
Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR-GTLESAFEVLKEMKKS 231
L +L+E NQ++LA F K + + + L P N+LIK C+ GT+++ ++ EM K
Sbjct: 128 LAILVEENQLNLAFKFYK-NMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVD 291
P+ TY TLI GLC+ GR EA +LF EMV KD P +TY LI+G C VD
Sbjct: 187 GCD-PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVD 244
Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
A + +E MK+ G PNVF Y++LM+G CK+G+ +A E+F+ M +P+ + YTTLI
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
C+ ++ EA+ELL M +G K D + ++ G C K EA L+++ GI
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 412 LNKASYRIVLNFSCQ------KGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
N+ ++ I + S + +A L M RG T L+ LCK G
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424
Query: 466 EDAAIALFGLVEMGFKPESDSWALLV 491
+ A + +V G P +W LL+
Sbjct: 425 QKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 139/286 (48%), Gaps = 6/286 (2%)
Query: 232 QMSYPNLITYSTLIDGLCKN-GRFR---EAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
+M N + ++ +C+ GR +++ +F +M D P Y ++
Sbjct: 76 RMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFD-CDPSQKAYVTVLAILVEE 134
Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK-EGKLQEAKEVFDEMKNFLLKPDTIG 346
+++ A K + M+ G P V + L+ C+ +G + ++F EM PD+
Sbjct: 135 NQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYT 194
Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
Y TLI+ CR GR+DEA +L EM E+ C +VT+ ++ GLC ++EA+ LE++
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
GI N +Y +++ C+ G +A+EL +M+ RG P+ T L+ LCK +
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
+A L + G KP++ + ++ C K A LDE+++
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 113/242 (46%), Gaps = 1/242 (0%)
Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
D ++ ++ K A+ ++ MK C + ++ G+ + + ++ VF
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR- 391
+MK+F P Y T++ +++ A + K M+E G + + N+++ LCR
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
+G ++ L + ++ G + +Y +++ C+ G +++A +L M+ + P T
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
L+ LC + ++A L + G +P +++ L++ +C+ + L A EL + ++
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 512 IK 513
+
Sbjct: 290 AR 291
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 293 AKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM-----KNFLLKPDTIGY 347
K+M F + P+ LM E ++++ VFD ++ + GY
Sbjct: 2 GSKVMMFKWSKNITPS--QVIKLMRA---EKDVEKSMAVFDSATAEYANGYVHDQSSFGY 56
Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE-GKIE---EALGMLE 403
L A + A +L+ MK C +V+ +I+L +CR G++ ++L +
Sbjct: 57 MVLR--LVSANKFKAAEDLIVRMKIENC---VVSEDILLS-ICRGYGRVHRPFDSLRVFH 110
Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
K+ ++ +Y VL ++ +L A + + M G P A+ N L+ LC+
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 464 MAEDAAIALFGLVEM---GFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
DA + +F +EM G P+S ++ L+ +CR ++ A +L E+V K+
Sbjct: 171 GTVDAGLKIF--LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 231/430 (53%), Gaps = 7/430 (1%)
Query: 66 ISLIKCEKEPQCALEIFNTVSE-QKGFNHNNATYATILDKLARYKKFEAVDAVLRQM--T 122
+S+I ++ AL+IF + GF HN TY +IL KL+R + F+ V++++ + +
Sbjct: 53 VSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS 112
Query: 123 YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
Y K E +F++L++++ +E + +F +I P K S+++++T LN+LI++ +
Sbjct: 113 YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRI-PDFGVKRSVRSLNTLLNVLIQNQRF 171
Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
DL K S + + PN N+L+K CK+ +ESA++VL E+ S PNL+TY+
Sbjct: 172 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI-PSMGLVPNLVTYT 230
Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
T++ G G A + EEM+ + PDA TY VL+DG+C+ G+ A +M+ M+
Sbjct: 231 TILGGYVARGDMESAKRVLEEMLDRGW-YPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
N PN Y ++ CKE K EA+ +FDEM PD+ +I+ C +VDE
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
A L ++M + C D + ++ LC+EG++ EA + ++ + G + +Y ++
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIA 408
Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
C+KGEL +A L M R P+ T N L+ L K G ++ L ++E+G P
Sbjct: 409 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468
Query: 483 ESDSWALLVE 492
++ +L E
Sbjct: 469 NKTTFLILFE 478
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 159/318 (50%), Gaps = 2/318 (0%)
Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
N + +K +F L++++ G ES+ + + + ++ + +TL++ L +N
Sbjct: 111 NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKR-SVRSLNTLLNVLIQNQ 169
Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
RF +F+ I P+ T N+L+ C+ ++ A K+++ + + G PN+ Y
Sbjct: 170 RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTY 229
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
TT++ G+ G ++ AK V +EM + PD YT L++ +C+ GR EA ++ +M++
Sbjct: 230 TTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
+ + VT+ +++ LC+E K EA M +++ + + V++ C+ ++++
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
A L R ML +P A + L+ LCK G +A LF E G P ++ L+
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR-KLFDEFEKGSIPSLLTYNTLIA 408
Query: 493 LICRGRKLLFAFELLDEL 510
+C +L A L D++
Sbjct: 409 GMCEKGELTEAGRLWDDM 426
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 48/390 (12%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL--NLMKHFSNCSLHE 147
G + + T+L+ L + ++F+ V A+ + + E+ IF L+K + E
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN-SKESFGITPNIFTCNLLVKALCKKNDIE 208
Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
++ +I P P+L +T L + ++ A+ L+ P+ + +
Sbjct: 209 SAYKVLDEI-PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR-GWYPDATTYTV 266
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS- 266
L+ +CK G A V+ +M+K+++ PN +TY +I LCK + EA +F+EM+
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIE-PNEVTYGVMIRALCKEKKSGEARNMFDEMLER 325
Query: 267 ---------------------------------KDQILPDALTYNVLIDGFCRGGKVDRA 293
K+ +PD + LI C+ G+V A
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 294 KKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
+K+ EF K G P++ Y TL+ G C++G+L EA ++D+M KP+ Y LI
Sbjct: 386 RKLFDEFEK--GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIE 443
Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
+ G V E + +L+EM E GC + TF I+ GL + GK E+A+ ++ +G +
Sbjct: 444 GLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KV 502
Query: 413 NKASYRIVL-NFSCQKGELEKAIELLRLML 441
+K S+ + L F+ GEL+K + L+ +L
Sbjct: 503 DKESWELFLKKFA---GELDKGVLPLKELL 529
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/553 (25%), Positives = 263/553 (47%), Gaps = 64/553 (11%)
Query: 6 FSLRKCCRFSSFSTS--------SSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRS 57
+ C +F FS S S SL P I +P + T +D+
Sbjct: 1 MAFSSCLKFYPFSISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDS---- 56
Query: 58 RFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAV 117
++ + + AL +FN S++ F+ A Y IL +L R F+ + +
Sbjct: 57 -----------LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKI 105
Query: 118 LRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLI 177
L M C+ FL L++ ++ L + +L + + KP + LNLL+
Sbjct: 106 LEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV 165
Query: 178 ESNQVDLAQNFLKYSNQHL-RLKPNTCIFNILIKHHCK---------------------- 214
+ N + L + + ++ + +KP+ FN+LIK C+
Sbjct: 166 DGNSLKLVE--ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 215 -------------RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
G L+ A + ++M + S+ N ++ + ++ G CK GR +A+
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN-VSVNVIVHGFCKEGRVEDALNFI 282
Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
+EM ++D PD T+N L++G C+ G V A +IM+ M G +P+V+ Y ++++G CK
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
G+++EA EV D+M P+T+ Y TLI+ C+ +V+EA EL + + +G D+ T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
FN ++ GLC A+ + E++ G ++ +Y ++++ C KG+L++A+ +L+ M
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKL 500
G T N L+ CKA +A +F +E+ G S ++ L++ +C+ R++
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAE-EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 501 LFAFELLDELVIK 513
A +L+D+++++
Sbjct: 522 EDAAQLMDQMIME 534
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 183/333 (54%), Gaps = 2/333 (0%)
Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
+V+ A NF++ + P+ FN L+ CK G ++ A E++ M + P++ T
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD-PDVYT 332
Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
Y+++I GLCK G +EA+E+ ++M+++D P+ +TYN LI C+ +V+ A ++ +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRD-CSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
+ G P+V + +L+ G C + A E+F+EM++ +PD Y LI+ C G++
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
DEAL +LK+M+ GC ++T+N ++ G C+ K EA + +++ G+ N +Y +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
++ C+ +E A +L+ M+ G P T N LL C+ G + AA + + G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIK 513
+P+ ++ L+ +C+ ++ A +LL + +K
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 213/424 (50%), Gaps = 20/424 (4%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARY----KKFEAVDAVLRQMTYETCKFHEGIF 133
AL +S Q GF + T+ T+++ L + E +D +L++ + +
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 134 LNLMKHFSNCSLHE--RVLEMFHKIHPITRE-KPSLKAISTCLNLLIESNQVDLAQNFLK 190
L C L E +E+ ++ ITR+ P+ +T ++ L + NQV+ A +
Sbjct: 338 SGL------CKLGEVKEAVEVLDQM--ITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 191 YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
L P+ C FN LI+ C A E+ +EM+ S+ P+ TY+ LID LC
Sbjct: 390 VLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMR-SKGCEPDEFTYNMLIDSLCS 447
Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
G+ EA+ + ++M +TYN LIDGFC+ K A++I + M+ +G + N
Sbjct: 448 KGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
Y TL++G CK ++++A ++ D+M KPD Y +L+ FCR G + +A ++++ M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
GC+ DIVT+ ++ GLC+ G++E A +L + GI L +Y V+ +K +
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVR-LCKAGMA-EDAAIALFGLVEMGFKPESDSWA 488
+AI L R ML + P A S ++ R LC G +A L L+E GF PE S
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686
Query: 489 LLVE 492
+L E
Sbjct: 687 MLAE 690
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 207/425 (48%), Gaps = 9/425 (2%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G + T+ T++ + + QM C + + +N++ H C RV
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW-SNVSVNVIVH-GFCK-EGRV 275
Query: 150 LEMFHKIHPITREK---PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFN 206
+ + I ++ + P +T +N L ++ V A + Q P+ +N
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE-GYDPDVYTYN 334
Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
+I CK G ++ A EVL +M S PN +TY+TLI LCK + EA EL + S
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCS-PNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
K ILPD T+N LI G C A ++ E M++ GC P+ F Y L++ C +GKL
Sbjct: 394 KG-ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
EA + +M+ I Y TLI+ FC+A + EA E+ EM+ G + VT+N ++
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
GLC+ ++E+A +++++ +G +K +Y +L C+ G+++KA ++++ M G
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
P T L+ LCKAG E A+ L + G ++ +++ + R RK A L
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Query: 507 LDELV 511
E++
Sbjct: 633 FREML 637
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 142/281 (50%), Gaps = 3/281 (1%)
Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
P Y ++ L ++G F + ++ E+M S + + T+ +LI+ + + D
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTS-TFLILIESYAQFELQDEILS 139
Query: 296 IMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
++++M + G P+ Y ++N L+ + +M + +KPD + LI
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
CRA ++ A+ +L++M G D TF ++ G EG ++ AL + E++ G +
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 415 ASYRIVLNFSCQKGELEKAIELLRLMLCR-GFLPHYATSNELLVRLCKAGMAEDAAIALF 473
S ++++ C++G +E A+ ++ M + GF P T N L+ LCKAG + A +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
+++ G+ P+ ++ ++ +C+ ++ A E+LD+++ ++
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 222/388 (57%), Gaps = 5/388 (1%)
Query: 73 KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
++P+ AL +F+ E GF H+ +Y++++ KLA+ + F+AVD +LR + Y + E +
Sbjct: 60 EDPEEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
F+ L++H+ ++ +++FHKI + ++++++T +N+L+++ +++ A++F
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVR-TIQSLNTLINVLVDNGELEKAKSFFD-G 176
Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
+ +RL+PN+ FNILIK + E+A +V EM + ++ P+++TY++LI LC+N
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQ-PSVVTYNSLIGFLCRND 235
Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
+A L E+M+ K +I P+A+T+ +L+ G C G+ + AKK+M M+ GC P + NY
Sbjct: 236 DMGKAKSLLEDMIKK-RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
LM+ K G++ EAK + EMK +KPD + Y L+N C RV EA +L EM+
Sbjct: 295 GILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
+GCK + T+ +++ G CR + L +L + A++ ++ + G L+
Sbjct: 355 KGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDH 414
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLC 460
A +L +M + LL LC
Sbjct: 415 ACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 178/387 (45%), Gaps = 45/387 (11%)
Query: 147 ERVLEMFHKIHPIT--REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
E L +FH+ + + PS ++ L + VD ++Y N R +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCR----ESL 118
Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
F LI+H+ K G+++ A +V ++ S + + +TLI+ L NG +A F+
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKIT-SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG- 176
Query: 265 VSKD-QILPDALTYNVLIDGF-----------------------------------CRGG 288
+KD ++ P+++++N+LI GF CR
Sbjct: 177 -AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
+ +AK ++E M PN + LM G C +G+ EAK++ +M+ KP + Y
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
L++ + GR+DEA LL EMK+R K D+V +NI++ LC E ++ EA +L ++
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
G N A+YR++++ C+ + + + +L ML P AT ++ L K G + A
Sbjct: 356 GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Query: 469 AIALFGLVEMGFKPESDSWALLVELIC 495
L + + S +W L+ +C
Sbjct: 416 CFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 1/256 (0%)
Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
+ LI K G +AI++F ++ S D + + N LI+ G++++AK +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRT-IQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
K+ PN ++ L+ GF + + A +VFDEM ++P + Y +LI CR +
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
+A LL++M ++ + + VTF +++ GLC +G+ EA ++ + Y G +Y I+
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
++ ++G +++A LL M R P N L+ LC +A L + G
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 481 KPESDSWALLVELICR 496
KP + ++ ++++ CR
Sbjct: 358 KPNAATYRMMIDGFCR 373
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 5/294 (1%)
Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
S F +EM + YP +YS+LI L K+ F +A++ +V + +
Sbjct: 67 SLFHQYQEMG-FRHDYP---SYSSLIYKLAKSRNF-DAVDQILRLVRYRNVRCRESLFMG 121
Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
LI + + G VD+A + + + C + + TL+N G+L++AK FD K+
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
L+P+++ + LI F + A ++ EM E + +VT+N ++G LCR + +A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
+LE + I N ++ +++ C KGE +A +L+ M RG P L+ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
K G ++A + L + + KP+ + +LV +C ++ A+ +L E+ +K
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK--NNGCNPNVFNYT 313
EA+ LF + + D +Y+ LI + D +I+ ++ N C ++F
Sbjct: 64 EALSLFHQ-YQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF--M 120
Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
L+ + K G + +A +VF ++ +F TLIN G +++A K+
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
+ + V+FNI++ G + E A + +++ + + +Y ++ F C+ ++ KA
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV-E 492
LL M+ + P+ T L+ LC G +A +F + G KP ++ +L+ +
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 493 LICRGR 498
L RGR
Sbjct: 301 LGKRGR 306
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 102/280 (36%), Gaps = 43/280 (15%)
Query: 48 DTCVDARKRSRFISHGAAIS--LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKL 105
D D R R +S I L KC+ E C ++F+ + E + + TY +++ L
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAAC--KVFDEMLEME-VQPSVVTYNSLIGFL 231
Query: 106 ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPS 165
R ++L M + + + F LMK + ++ + KP
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME-YRGCKPG 290
Query: 166 LKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVL 225
L ++ L + ++D A+ L + R+KP+ I+NIL+ H C + A+ VL
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKR-RIKPDVVIYNILVNHLCTECRVPEAYRVL 349
Query: 226 KEMKKSQMSYPNLITYSTLIDGLC-----------------------------------K 250
EM+ PN TY +IDG C K
Sbjct: 350 TEMQMKGCK-PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIK 408
Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
G A + E M K+ N+L D + G V
Sbjct: 409 GGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGV 448
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 226/421 (53%), Gaps = 11/421 (2%)
Query: 97 TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
T+ ++ + ++ ++LR MT C + I+ L+ S C+ L++ ++
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHL--RLKPNTCIFNILIKHHCK 214
+ P + + + L + ++++ A K N+ L P+ + L+ CK
Sbjct: 279 F-LMGCVPDAETFNDVILGLCKFDRINEAA---KMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 215 RGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
G +++A ++ + K P ++ ++TLI G +GR +A + +MV+ I+PD
Sbjct: 335 IGRVDAAKDLFYRIPK-----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
TYN LI G+ + G V A +++ M+N GC PNV++YT L++GFCK GK+ EA V +E
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
M LKP+T+G+ LI+ FC+ R+ EA+E+ +EM +GCK D+ TFN ++ GLC +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
I+ AL +L + +G+ N +Y ++N ++GE+++A +L+ M+ +G T N
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
L+ LC+AG + A ++ G P + S +L+ +CR + A E E+V++
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 515 S 515
S
Sbjct: 630 S 630
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 231/470 (49%), Gaps = 35/470 (7%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
++E+F+ Q G+ H+ Y ++ KL +F+ +D +L QM E F E +F+++M
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
+ + + + ++ + +P+ K+ + L +L+ N +A N Y +
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF-YDMLSRK 212
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
+ P F +++K C ++SA +L++M K PN + Y TLI L K R EA
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTK-HGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
++L EEM + PDA T+N +I G C+ +++ A K++ M G P+ Y LMN
Sbjct: 272 LQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 318 GFCKEGKLQEAKEVF--------------------------------DEMKNFLLKPDTI 345
G CK G++ AK++F D + ++ + PD
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
Y +LI + + G V ALE+L +M+ +GCK ++ ++ I++ G C+ GKI+EA +L ++
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
DG+ N + +++ C++ + +A+E+ R M +G P T N L+ LC+
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKES 515
+ A L ++ G + ++ L+ R ++ A +L++E+V + S
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 197/359 (54%), Gaps = 7/359 (1%)
Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
++F++I KP + +T ++ + ++D A+ L + P+ C +N LI
Sbjct: 343 DLFYRI-----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
+ K G + A EVL +M+ ++ PN+ +Y+ L+DG CK G+ EA + EM S D +
Sbjct: 398 GYWKEGLVGLALEVLHDMR-NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM-SADGL 455
Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
P+ + +N LI FC+ ++ A +I M GC P+V+ + +L++G C+ +++ A
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
+ +M + + +T+ Y TLIN F R G + EA +L+ EM +G D +T+N ++ GLC
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
R G++++A + EK+ DG + S I++N C+ G +E+A+E + M+ RG P
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
T N L+ LC+AG ED L G P++ ++ L+ +C+G + A LLDE
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 202/410 (49%), Gaps = 15/410 (3%)
Query: 89 KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
+GF ++ TY +++ L + + +A + + Y K IF L+ F H R
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVT---HGR 368
Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLI---ESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
+ + + + + + T +L+ + V LA L + ++ KPN +
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL-HDMRNKGCKPNVYSY 427
Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
IL+ CK G ++ A+ VL EM + PN + ++ LI CK R EA+E+F EM
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLK-PNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
K PD T+N LI G C ++ A ++ M + G N Y TL+N F + G++
Sbjct: 487 RKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 326 QEAKEVFDEMKNFLLKP-DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
+EA+++ +EM F P D I Y +LI CRAG VD+A L ++M G ++ NI
Sbjct: 546 KEARKLVNEMV-FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
++ GLCR G +EEA+ +++ G + ++ ++N C+ G +E + + R + G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
P T N L+ LCK G DA + L +E GF P +W++L++ I
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
A+EIF + +KG + T+ +++ L + + +LR M E + + L+
Sbjct: 478 AVEIFREMP-RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLIESNQVDLAQNFLK--YSN 193
F + E ++ + + L I+ + + L + +VD A++ + +
Sbjct: 537 NAFLR---RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
H P+ NILI C+ G +E A E KEM + S P+++T+++LI+GLC+ GR
Sbjct: 594 GH---APSNISCNILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVTFNSLINGLCRAGR 649
Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
+ + +F ++ + I PD +T+N L+ C+GG V A +++ +G PN ++
Sbjct: 650 IEDGLTMFRKL-QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 314 TLMNGFCKEGKLQEAK 329
L+ + L +
Sbjct: 709 ILLQSIIPQETLDRRR 724
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 240/447 (53%), Gaps = 5/447 (1%)
Query: 65 AISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
+ L+K EK P+ A +F++ + G+ H+ Y IL +L+ + V ++ + +
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 125 TCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
CK E + L+++K + S+ ++ L++F ++ I +P++++ +T LN +E+ Q
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 185 AQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTL 244
++ Y + + PN +N+LIK CK+ E A L M K P++ +YST+
Sbjct: 133 VESLFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK-PDVFSYSTV 190
Query: 245 IDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME-FMKNN 303
I+ L K G+ +A+ELF+EM S+ + PD YN+LIDGF + A ++ + ++++
Sbjct: 191 INDLAKAGKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 304 GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
PNV + +++G K G++ + ++++ MK + D Y++LI+ C AG VD+A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
+ E+ ER D+VT+N +LGG CR GKI+E+L + + + +N SY I++
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKG 368
Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
+ G++++A + RLM +G+ T + LC G A + + G +
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428
Query: 484 SDSWALLVELICRGRKLLFAFELLDEL 510
++A +++ +C+ ++L A L+ E+
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEM 455
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 228/473 (48%), Gaps = 52/473 (10%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKK----FEAVDAVLRQMT-YETCKFHEGI 132
ALE+F+ +SE +G + Y ++D + K E D +L + Y K H
Sbjct: 203 ALELFDEMSE-RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTH--- 258
Query: 133 FLNLM-KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY 191
N+M S C + L+++ ++ REK L S+ ++ L ++ VD A++
Sbjct: 259 --NIMISGLSKCGRVDDCLKIWERMKQNEREK-DLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 192 SNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
++ + + +N ++ C+ G ++ + E+ + M+ + N+++Y+ LI GL +N
Sbjct: 316 LDER-KASIDVVTYNTMLGGFCRCGKIKESLELWRIME--HKNSVNIVSYNILIKGLLEN 372
Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
G+ EA ++ M +K D TY + I G C G V++A +M+ ++++G + +V+
Sbjct: 373 GKIDEATMIWRLMPAKGYA-ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYA 431
Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMK---------------------------NFLLK--- 341
Y ++++ CK+ +L+EA + EM +F L+
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 342 -----PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
P + Y LI C+AG+ EA +KEM E G K D+ T++I+L GLCR+ KI+
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
AL + + G+ + + I+++ C G+L+ A+ ++ M R + T N L+
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
K G + A + + +MG +P+ S+ +++ +C R + +A E D+
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDD 664
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 190/441 (43%), Gaps = 58/441 (13%)
Query: 61 SHGAAIS-LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
+H IS L KC + C L+I+ + +Q + TY++++ L + ++V
Sbjct: 257 THNIMISGLSKCGRVDDC-LKIWERM-KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS--TCLNLLI 177
++ + ++ F C + LE++ I K S+ +S + L+
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR----IMEHKNSVNIVSYNILIKGLL 370
Query: 178 ESNQVDLAQNFLKYSNQHLRLKP------NTCIFNILIKHHCKRGTLESAFEVLKEMKKS 231
E+ ++D A RL P + + I I C G + A V++E++ S
Sbjct: 371 ENGKIDEATMIW-------RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 232 QMSYPNLITYSTLIDGLCKNGRFREAIELFEEM--------------------------- 264
+ ++ Y+++ID LCK R EA L +EM
Sbjct: 424 G-GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 265 -------VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+ K+ P ++YN+LI G C+ GK A ++ M NG P++ Y+ L+
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
G C++ K+ A E++ + L+ D + + LI+ C G++D+A+ ++ M+ R C A
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
++VT+N ++ G + G A + ++ G+ + SY ++ C + A+E
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Query: 438 RLMLCRGFLPHYATSNELLVR 458
G P T N +LVR
Sbjct: 663 DDARNHGIFPTVYTWN-ILVR 682
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 225/419 (53%), Gaps = 5/419 (1%)
Query: 80 EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKH 139
++F + + F ++T +++++ A F++V+ +L ++ E E F+ + +
Sbjct: 62 KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRA 121
Query: 140 FSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKY---SNQHL 196
+ L ++ +++FH++ R K S+K+ ++ LN++I F Y SN ++
Sbjct: 122 YGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM 181
Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
+ PN FN++IK CK ++ A EV + M + + P+ TY TL+DGLCK R E
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK-CLPDGYTYCTLMDGLCKEERIDE 240
Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
A+ L +EM S + P + YNVLIDG C+ G + R K+++ M GC PN Y TL+
Sbjct: 241 AVLLLDEMQS-EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
+G C +GKL +A + + M + P+ + Y TLIN + R +A+ LL M+ERG
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
+ +++++ GL +EGK EEA+ + K+ G N Y ++++ C++G+ +A E+
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
L M+ G LP+ T + L+ K G+ E+A + + G +++L++ +C
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 219/456 (48%), Gaps = 37/456 (8%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
A+E+F + E+K + TY T++D L + ++ + +L +M E C I+ L+
Sbjct: 206 AIEVFRGMPERKCL-PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
RV ++ + + P+ +T ++ L ++D A + L+ +
Sbjct: 265 DGLCKKGDLTRVTKLVDNMF-LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS-K 322
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
PN + LI K+ A +L M++ + + N YS LI GL K G+ EA
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE-RGYHLNQHIYSVLISGLFKEGKAEEA 381
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+ L+ +M K P+ + Y+VL+DG CR GK + AK+I+ M +GC PN + Y++LM
Sbjct: 382 MSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
GF K G +EA +V+ EM + Y+ LI+ C GRV EA+ + +M G K
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGI-------YLNKASYRIVLNFSCQKGEL 430
D V ++ I+ GLC G ++ AL KL+++ + + +Y I+L+ C + ++
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAAL----KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 431 EKAIELLRLMLCRGFLPHYATSN---------------------ELLVRLCKAGMAEDAA 469
+A++LL ML RG P T N EL+VRL K A
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGAC 616
Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFE 505
+ ++ P++ +WA++V IC+ +K+ A +
Sbjct: 617 TIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 162/310 (52%), Gaps = 3/310 (0%)
Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
F ++ + + K + A ++ M ++ +++++++ + G + +E ++ +
Sbjct: 115 FIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV 174
Query: 265 VSKD---QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
V+ + I P+ L++N++I C+ VDRA ++ M C P+ + Y TLM+G CK
Sbjct: 175 VNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234
Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
E ++ EA + DEM++ P + Y LI+ C+ G + +L+ M +GC + VT
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294
Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
+N ++ GLC +GK+++A+ +LE++ N +Y ++N ++ A+ LL M
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLL 501
RG+ + + L+ L K G AE+A + E G KP +++LV+ +CR K
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 502 FAFELLDELV 511
A E+L+ ++
Sbjct: 415 EAKEILNRMI 424
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 169/370 (45%), Gaps = 23/370 (6%)
Query: 39 KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
K D V + V ++ +++G I+ + ++ A+ + +++ E++G++ N Y
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM-EERGYHLNQHIY 365
Query: 99 ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
+ ++ L + K E ++ R+M + CK + ++ L+ E+ +++
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
+ P+ S+ + ++ + A K ++ + C +++LI C G +
Sbjct: 426 -SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC-YSVLIDGLCGVGRV 483
Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ--ILPDALT 276
+ A V +M + P+ + YS++I GLC G A++L+ EM+ +++ PD +T
Sbjct: 484 KEAMMVWSKMLTIGIK-PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
YN+L+DG C + RA ++ M + GC+P+V T +N L E D+ +
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN------TLSEKSNSCDKGR 596
Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
+FL L+ + RV A +++ M + T+ +I+ +C+ KI
Sbjct: 597 SFL--------EELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKIN 648
Query: 397 EALGMLEKLW 406
A ++K W
Sbjct: 649 AA---IDKCW 655
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 182/315 (57%), Gaps = 5/315 (1%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ +N++I +CK G + +A VL M S P+++TY+T++ LC +G+ ++A+E
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAME 225
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
+ + M+ +D PD +TY +LI+ CR V A K+++ M++ GC P+V Y L+NG
Sbjct: 226 VLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
CKEG+L EA + ++M + +P+ I + ++ C GR +A +LL +M +G +
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
VTFNI++ LCR+G + A+ +LEK+ G N SY +L+ C++ ++++AIE L
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
M+ RG P T N +L LCK G EDA L L G P ++ +++ + + K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 500 LLFAFELLDELVIKE 514
A +LLDE+ K+
Sbjct: 465 TGKAIKLLDEMRAKD 479
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 182/325 (56%), Gaps = 6/325 (1%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ +N+L+ CK G L+ A + L +M S PN+IT++ ++ +C GR+ +A +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVITHNIILRSMCSTGRWMDAEK 330
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
L +M+ K P +T+N+LI+ CR G + RA I+E M +GC PN +Y L++GF
Sbjct: 331 LLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
CKE K+ A E + M + PD + Y T++ C+ G+V++A+E+L ++ +GC +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
+T+N ++ GL + GK +A+ +L+++ + + +Y ++ ++G++++AI+
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
G P+ T N +++ LCK+ + A L ++ G KP S+ +L+E +
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Query: 500 LLFAFELLDEL----VIKESGTIQV 520
A ELL+EL ++K+S QV
Sbjct: 570 AKEALELLNELCNKGLMKKSSAEQV 594
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 147/296 (49%), Gaps = 33/296 (11%)
Query: 248 LCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNP 307
+ + G E + E MV + PD + LI GFCR GK +A KI+E ++ +G P
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 308 NVFNYTTLMNGFCK--------------------------------EGKLQEAKEVFDEM 335
+V Y +++G+CK GKL++A EV D M
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 336 KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
PD I YT LI CR V A++LL EM++RGC D+VT+N+++ G+C+EG++
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
+EA+ L + G N ++ I+L C G A +LL ML +GF P T N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ LC+ G+ A L + + G +P S S+ L+ C+ +K+ A E L+ +V
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
+ R G++EE LE + Y G + ++ C+ G+ KA ++L ++ G +P
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
T N ++ CKAG + AL L M P+ ++ ++ +C KL A E+LD
Sbjct: 172 VITYNVMISGYCKAGEINN---ALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 509 ELVIKE 514
++ ++
Sbjct: 229 RMLQRD 234
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
A+EI N +S KG + TY T++D LA+ K +L +M + K + +L+
Sbjct: 433 AVEILNQLS-SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
S + ++ FH+ + +P+ ++ + L +S Q D A +FL +
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGI-RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-G 549
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
KPN + ILI+ G + A E+L E+
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNEL 580
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 222/431 (51%), Gaps = 10/431 (2%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G+ N T +++L+ K+ A++ QM + T + N + H LH +
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQM-FVTGYQPNTVTFNTLIH--GLFLHNKA 202
Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
E I + + +P L +N L + DLA N L Q +L+P I+N
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNT 261
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
+I CK ++ A + KEM+ + PN++TYS+LI LC GR+ +A L +M+ +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIR-PNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
+I PD T++ LID F + GK+ A+K+ + M +P++ Y++L+NGFC +L E
Sbjct: 321 -KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
AK++F+ M + PD + Y TLI FC+ RV+E +E+ +EM +RG + VT+NI++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
GL + G + A + +++ DG+ N +Y +L+ C+ G+LEKA+ + + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
T N ++ +CKAG ED L G KP+ ++ ++ CR A L
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 508 DELVIKESGTI 518
E+ KE GT+
Sbjct: 560 KEM--KEDGTL 568
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 208/418 (49%), Gaps = 15/418 (3%)
Query: 39 KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
KA + D V + +++G ++ + + A + N + EQ Y
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIY 259
Query: 99 ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK---HFSNCSLHERVL-EMFH 154
TI+D L +YK + + ++M + + + + +L+ ++ S R+L +M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHC 213
+ + P + S ++ ++ ++ A+ Y R + P+ ++ LI C
Sbjct: 320 R-----KINPDVFTFSALIDAFVKEGKLVEAEKL--YDEMVKRSIDPSIVTYSSLINGFC 372
Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
L+ A ++ E S+ +P+++TY+TLI G CK R E +E+F EM S+ ++ +
Sbjct: 373 MHDRLDEAKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGN 430
Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
+TYN+LI G + G D A++I + M ++G PN+ Y TL++G CK GKL++A VF+
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
++ ++P Y +I C+AG+V++ +L + +G K D+V +N ++ G CR+G
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
EEA + +++ DG N Y ++ + G+ E + EL++ M GF +T
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 205/442 (46%), Gaps = 35/442 (7%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLH 146
G+ N T+ T++ L + K A++ +M + C+ G+ +N + + L
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 147 ERVLEMFH--KIHP-------ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--- 194
+L K+ P I K + LNL E + N + YS+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 195 ------------------HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP 236
++ P+ F+ LI K G L A ++ EM K + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID-P 359
Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
+++TYS+LI+G C + R EA ++FE MVSK PD +TYN LI GFC+ +V+ ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
M G N Y L+ G + G A+E+F EM + + P+ + Y TL++ C+
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
G++++A+ + + ++ + I T+NI++ G+C+ GK+E+ + L G+ + +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
Y +++ C+KG E+A L + M G LP+ N L+ + G E +A + +
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 477 EMGFKPESDSWALLVELICRGR 498
GF ++ + L+ ++ GR
Sbjct: 599 SCGFAGDASTIGLVTNMLHDGR 620
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 185/387 (47%), Gaps = 38/387 (9%)
Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
+R PS+ S L+ + + N+ D+ + L Q+L + N ++ILI C+R L
Sbjct: 75 SRPFPSIIEFSKLLSAIAKMNKFDVVIS-LGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSK----------- 267
A VL +M K + Y PN++T S+L++G C + R EA+ L ++M
Sbjct: 134 LALAVLGKMMK--LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 268 ------------------DQIL-----PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG 304
D+++ PD +TY V+++G C+ G D A ++ M+
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 305 CNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
P V Y T+++G CK + +A +F EM+ ++P+ + Y++LI+C C GR +A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
LL +M ER D+ TF+ ++ +EGK+ EA + +++ I + +Y ++N
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
C L++A ++ M+ + P T N L+ CK E+ + + G +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 485 DSWALLVELICRGRKLLFAFELLDELV 511
++ +L++ + + A E+ E+V
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMV 458
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 157/294 (53%), Gaps = 2/294 (0%)
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
L+ A + EM KS+ +P++I +S L+ + K +F I L E+M + I + TY
Sbjct: 62 LDDAVALFGEMVKSR-PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG-IPHNHYTY 119
Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
++LI+ FCR ++ A ++ M G PN+ ++L+NG+C ++ EA + D+M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
+P+T+ + TLI+ + EA+ L+ M +GC+ D+VT+ +++ GLC+ G +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
A +L K+ + Y +++ C+ ++ A+ L + M +G P+ T + L+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
LC G DA+ L ++E P+ +++ L++ + KL+ A +L DE+V
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
K+D A + M + P++ ++ L++ K K + ++M+N + + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
LINCFCR ++ AL +L +M + G + +IVT + +L G C +I EA+ ++++++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
G N ++ +++ + +A+ L+ M+ +G P T ++ LCK G D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG-DTDL 239
Query: 469 AIALFGLVEMG-FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
A L +E G +P + +++ +C+ + + A L E+ K
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 1/194 (0%)
Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
NG E KL +A +F EM P I ++ L++ + + D + L ++M+ G
Sbjct: 55 NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
+ T++I++ CR ++ AL +L K+ G N + +LN C + +A+ L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
+ M G+ P+ T N L+ L A +A + +V G +P+ ++ ++V +C+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 497 GRKLLFAFELLDEL 510
AF LL+++
Sbjct: 234 RGDTDLAFNLLNKM 247
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 174/295 (58%), Gaps = 2/295 (0%)
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
L+P FN LI +CK G L+ F + +M+KS+ + P++ TYS LI+ LCK + A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR-TRPDVFTYSALINALCKENKMDGA 329
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
LF+EM K ++P+ + + LI G R G++D K+ + M + G P++ Y TL+N
Sbjct: 330 HGLFDEMC-KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
GFCK G L A+ + D M L+PD I YTTLI+ FCR G V+ ALE+ KEM + G +
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
D V F+ ++ G+C+EG++ +A L ++ GI + +Y ++++ C+KG+ + +LL
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
+ M G +P T N LL LCK G ++A + L ++ +G P+ ++ L+E
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 164/295 (55%), Gaps = 5/295 (1%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNF-LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESA 221
+P++ + +T +N + +D + F LK+ + R +P+ ++ LI CK ++ A
Sbjct: 272 QPTVVSFNTLINGYCKVGNLD--EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 222 FEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLI 281
+ EM K + PN + ++TLI G +NG E +++M+SK + PD + YN L+
Sbjct: 330 HGLFDEMCKRGL-IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK-GLQPDIVLYNTLV 387
Query: 282 DGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
+GFC+ G + A+ I++ M G P+ YTTL++GFC+ G ++ A E+ EM ++
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
D +G++ L+ C+ GRV +A L+EM G K D VT+ +++ C++G + +
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL 507
Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
L+++ DG + +Y ++LN C+ G+++ A LL ML G +P T N LL
Sbjct: 508 LKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 232/508 (45%), Gaps = 62/508 (12%)
Query: 25 PWISPLEVIKANTPKADPPVETSD--TCVDARKRSRFISHGAAISLIKCE--KEPQCAL- 79
P + L V ++ K DPP+E S C RK +S + LI PQ ++
Sbjct: 44 PVLVKLSVAIRDSYK-DPPLEFSSFTDCPSIRKVLPSLSVHHVVDLINHNPLSLPQRSIF 102
Query: 80 EIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK-FHEGIFLNL-- 136
F +S Q GF TY + LA ++ F +++ + K +F++L
Sbjct: 103 AFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVE 162
Query: 137 --------------MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQV 182
M +++ ++ F ++R+ I C NLL
Sbjct: 163 MRVTPMCGFLVDALMITYTDLGFIPDAIQCFR----LSRKHRFDVPIRGCGNLL------ 212
Query: 183 DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYS 242
++ ++L P I+ ++ L++ F + N+ ++
Sbjct: 213 ----------DRMMKLNPTGTIWGFYME------ILDAGFPL------------NVYVFN 244
Query: 243 TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN 302
L++ CK G +A ++F+E ++K + P +++N LI+G+C+ G +D ++ M+
Sbjct: 245 ILMNKFCKEGNISDAQKVFDE-ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 303 NGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDE 362
+ P+VF Y+ L+N CKE K+ A +FDEM L P+ + +TTLI+ R G +D
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363
Query: 363 ALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
E ++M +G + DIV +N ++ G C+ G + A +++ + G+ +K +Y +++
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
Query: 423 FSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
C+ G++E A+E+ + M G + L+ +CK G DA AL ++ G KP
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483
Query: 483 ESDSWALLVELICRGRKLLFAFELLDEL 510
+ ++ ++++ C+ F+LL E+
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 48/379 (12%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
GF N + +++K + V ++T + + F L+ + +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
+ H++ +R +P + S +N L + N++D A + L PN IF LI
Sbjct: 295 FRLKHQMEK-SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLIPNDVIFTTLI 352
Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
H + G ++ E ++M + P+++ Y+TL++G CKNG A + + M+ +
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQ-PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR-G 410
Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC------------------------ 305
+ PD +TY LIDGFCRGG V+ A +I + M NG
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 306 -----------NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCF 354
P+ YT +M+ FCK+G Q ++ EM++ P + Y L+N
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 355 CRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
C+ G++ A LL M G D +T+N +L G R + ++ GI +
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADL 587
Query: 415 ASYRIVLNFSCQKGELEKA 433
ASY+ ++N EL++A
Sbjct: 588 ASYKSIVN------ELDRA 600
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 193/363 (53%), Gaps = 7/363 (1%)
Query: 135 NLMKHFSNCSLHERVLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
N++ HF C L R+ E H + + P + + ST +N ++D ++
Sbjct: 250 NIVIHFV-CQLG-RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
+ LKPN+ I+ +I C+ L A E EM + Q P+ + Y+TLIDG CK G
Sbjct: 308 KRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVYTTLIDGFCKRG 365
Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
R A + F EM S+D I PD LTY +I GFC+ G + A K+ M G P+ +
Sbjct: 366 DIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
T L+NG+CK G +++A V + M P+ + YTTLI+ C+ G +D A ELL EM +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
G + +I T+N I+ GLC+ G IEEA+ ++ + G+ + +Y +++ C+ GE++K
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
A E+L+ ML +G P T N L+ C GM ED L ++ G P + ++ LV+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 493 LIC 495
C
Sbjct: 605 QYC 607
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 174/311 (55%), Gaps = 2/311 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+T ++ LI CKRG + +A + EM ++ P+++TY+ +I G C+ G EA +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDMVEAGK 407
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
LF EM K + PD++T+ LI+G+C+ G + A ++ M GC+PNV YTTL++G
Sbjct: 408 LFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
CKEG L A E+ EM L+P+ Y +++N C++G ++EA++L+ E + G AD
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
VT+ ++ C+ G++++A +L+++ G+ ++ +++N C G LE +LL
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
ML +G P+ T N L+ + C + A + G P+ ++ LV+ C+ R
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 500 LLFAFELLDEL 510
+ A+ L E+
Sbjct: 647 MKEAWFLFQEM 657
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 216/427 (50%), Gaps = 10/427 (2%)
Query: 87 EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSN-CSL 145
E KG+ + +Y+T+++ R+ + + V ++ M + K + I+ +++ C L
Sbjct: 273 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 146 HERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTC 203
E E F ++ R+ P +T ++ + + A F Y + P+
Sbjct: 333 AE-AEEAFSEM---IRQGILPDTVVYTTLIDGFCKRGDIRAASKFF-YEMHSRDITPDVL 387
Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
+ +I C+ G + A ++ EM + P+ +T++ LI+G CK G ++A +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
M+ + P+ +TY LIDG C+ G +D A +++ M G PN+F Y +++NG CK G
Sbjct: 447 MI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
++EA ++ E + L DT+ YTTL++ +C++G +D+A E+LKEM +G + IVTFN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
+++ G C G +E+ +L + GI N ++ ++ C + L+ A + + M R
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
G P T L+ CKA ++A + GF ++++L++ + +K L A
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 504 FELLDEL 510
E+ D++
Sbjct: 686 REVFDQM 692
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 135/245 (55%), Gaps = 2/245 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
PN + LI CK G L+SA E+L EM K + PN+ TY+++++GLCK+G EA++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
L E + + D +TY L+D +C+ G++D+A++I++ M G P + + LMNGF
Sbjct: 513 LVGEFEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
C G L++ +++ + M + P+ + +L+ +C + A + K+M RG D
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
T+ ++ G C+ ++EA + +++ G ++ ++Y +++ ++ + +A E+
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 440 MLCRG 444
M G
Sbjct: 692 MRREG 696
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 215/455 (47%), Gaps = 32/455 (7%)
Query: 82 FNTVSEQKGFNHNNATYATILD-----KLARYKKFEAVDAVLRQMTYETCKFH-EGIFLN 135
F+T+++ + F + A++ D ++ K + + R + CKF + +
Sbjct: 34 FSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWV 93
Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
LMK C + VL+ F +R +L+++ ++L + S + +AQ+ + +
Sbjct: 94 LMK--IKCD-YRLVLDFFDWAR--SRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWER 148
Query: 196 LRLKPNTCI---FNILIKHHCKRGTLESAFEVLKE-------MKKSQMSYPNLITYSTLI 245
+L F++L+ + G+ F+V + +++++ + ++ Y ++
Sbjct: 149 PKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVL 208
Query: 246 D---------GLCKN-GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
L K+ + AI +F E + + + +YN++I C+ G++ A
Sbjct: 209 SVDSCNVYLTRLSKDCYKTATAIIVFREF-PEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267
Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
++ M+ G P+V +Y+T++NG+C+ G+L + ++ + MK LKP++ Y ++I C
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
R ++ EA E EM +G D V + ++ G C+ G I A ++ I +
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
+Y +++ CQ G++ +A +L M C+G P T EL+ CKAG +DA +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
++ G P ++ L++ +C+ L A ELL E+
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 138/251 (54%), Gaps = 3/251 (1%)
Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
P++ +T ++ L + +D A L + + L+PN +N ++ CK G +E A +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELL-HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
++ E + + ++ + +TY+TL+D CK+G +A E+ +EM+ K + P +T+NVL++G
Sbjct: 513 LVGEFEAAGLN-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNG 570
Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
FC G ++ +K++ +M G PN + +L+ +C L+ A ++ +M + + PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
Y L+ C+A + EA L +EMK +G + T+++++ G + K EA + +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 404 KLWYDGIYLNK 414
++ +G+ +K
Sbjct: 691 QMRREGLAADK 701
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 4/295 (1%)
Query: 89 KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
KG ++ T+ +++ + + V M C + + L+ +
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
E+ H++ I + P++ ++ +N L +S ++ A + + L +T + L
Sbjct: 475 ANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKLVG-EFEAAGLNADTVTYTTL 532
Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
+ +CK G ++ A E+LKEM + P ++T++ L++G C +G + +L M++K
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQ-PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
I P+A T+N L+ +C + A I + M + G P+ Y L+ G CK ++EA
Sbjct: 592 -IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
+F EMK Y+ LI F + + EA E+ +M+ G AD F+
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 4/285 (1%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
Q G + N TY T++D L + ++ + +L +M + + + +++ E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
+++ + ++ +T ++ +S ++D AQ LK L+P FN+
Sbjct: 509 EAVKLVGEFEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILK-EMLGKGLQPTIVTFNV 566
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
L+ C G LE ++L M ++ PN T+++L+ C + A ++++M S+
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIA-PNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
+ PD TY L+ G C+ + A + + MK G + +V Y+ L+ GF K K E
Sbjct: 626 G-VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
A+EVFD+M+ L D + + + R D ++ + E+ E
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 1/242 (0%)
Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE-GKLQEAKEV 331
D ++V G + A+++ E M N G +V + + K+ K A V
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
F E + + Y +I+ C+ GR+ EA LL M+ +G D+++++ ++ G CR
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
G++++ ++E + G+ N Y ++ C+ +L +A E M+ +G LP
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
L+ CK G A+ + + P+ ++ ++ C+ ++ A +L E+
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 512 IK 513
K
Sbjct: 414 CK 415
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 222/427 (51%), Gaps = 12/427 (2%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
+ G+ ++ T+ T++ L R+ + A++ +M + C+ GI +N + +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTC 203
L +L+ + + +P + +T ++ L V+ A N F + N+ +R PN
Sbjct: 239 LALSLLKKMEQ----GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR--PNVV 292
Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
+N LI+ C G A +L +M + +++ PN++T+S LID K G+ EA +L++E
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
M+ K I PD TY+ LI+GFC ++D AK + E M + C PNV Y TL+ GFCK
Sbjct: 352 MI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
++ E E+F EM L +T+ YTTLI+ F +A D A + K+M G DI+T++
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
I+L GLC GK+E AL + E L + + +Y I++ C+ G++E +L + +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
G P+ T ++ C+ G+ E+A + E G P+S ++ L+ R +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 504 FELLDEL 510
EL+ E+
Sbjct: 591 AELIREM 597
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 219/440 (49%), Gaps = 36/440 (8%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSN---- 142
G +HN TY+ +++ R + AVL +M YE LN H +
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 143 CSLHERVLEMFHK---------IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
SL +++EM ++ IH + R + +A++ ++++ Q DL
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT------- 223
Query: 194 QHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
+ I++ CKRG ++ A +LK+M++ ++ P ++ Y+T+ID LC
Sbjct: 224 -----------YGIVVNGLCKRGDIDLALSLLKKMEQGKIE-PGVVIYNTIIDALCNYKN 271
Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
+A+ LF EM +K I P+ +TYN LI C G+ A +++ M NPNV ++
Sbjct: 272 VNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
L++ F KEGKL EA++++DEM + PD Y++LIN FC R+DEA + + M +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
C ++VT+N ++ G C+ +++E + + ++ G+ N +Y +++ Q E + A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
+ + M+ G LP T + LL LC G E A + L +P+ ++ +++E
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 494 ICRGRKLLFAFELLDELVIK 513
+C+ K+ ++L L +K
Sbjct: 511 MCKAGKVEDGWDLFCSLSLK 530
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 152/315 (48%), Gaps = 2/315 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ F+ L+ K + + ++M+ +S+ NL TYS LI+ C+ + A+
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH-NLYTYSILINCFCRRSQLSLALA 137
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
+ +M+ K PD +T N L++GFC G ++ A ++ M G P+ F + TL++G
Sbjct: 138 VLAKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
+ + EA + D M +PD + Y ++N C+ G +D AL LLK+M++ + +
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
V +N I+ LC + +AL + ++ GI N +Y ++ C G A LL
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
M+ R P+ T + L+ K G +A +++ P+ +++ L+ C +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 500 LLFAFELLDELVIKE 514
L A + + ++ K+
Sbjct: 377 LDEAKHMFELMISKD 391
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
KL +A +F +M P + ++ L++ + + D + L ++M+ G ++ T++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
I++ CR ++ AL +L K+ G + + +LN C + A+ L+ M+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
G+ P T N L+ L + A +A + +V G +P+ ++ ++V +C+ + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 504 FELLDELVIKESGTIQ 519
LL ++ E G I+
Sbjct: 241 LSLLKKM---EQGKIE 253
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 242/485 (49%), Gaps = 25/485 (5%)
Query: 39 KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
KAD V+ + +R I S I K+ + L + + E KG H+ T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM-ESKGIAHSIYTL 126
Query: 99 ATILDKLARYKK----FEAVDAVLRQMTYETCKFHEGIFLNLM----KHFSNCSLHERVL 150
+ +++ R +K F + +++ + YE LN + + L +R++
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMK-LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIK 210
EM HK P+L ++T +N L + +V A + + +PN + ++
Sbjct: 186 EMGHK--------PTLITLNTLVNGLCLNGKVSDAVVLIDRMVET-GFQPNEVTYGPVLN 236
Query: 211 HHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQI 270
CK G A E+L++M++ + + + YS +IDGLCK+G A LF EM K
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GF 294
Query: 271 LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKE 330
D +TYN LI GFC G+ D K++ M +PNV ++ L++ F KEGKL+EA +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 331 VFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC 390
+ EM + P+TI Y +LI+ FC+ R++EA++++ M +GC DI+TFNI++ G C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYA 450
+ +I++ L + ++ G+ N +Y ++ CQ G+LE A +L + M+ R P
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 451 TSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESD--SWALLVELICRGRKLLFAFELLD 508
+ LL LC G E A+ +FG +E K E D + +++ +C K+ A++L
Sbjct: 475 SYKILLDGLCDNGELE-KALEIFGKIEKS-KMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 509 ELVIK 513
L +K
Sbjct: 533 SLPLK 537
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 214/426 (50%), Gaps = 8/426 (1%)
Query: 39 KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
K V D V+ + +++G ++++ + A+E+ + E++ + Y
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKY 266
Query: 99 ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
+ I+D L + + + +M + K + L+ F N + ++ +
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM-- 324
Query: 159 ITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGT 217
I R+ P++ S ++ ++ ++ A LK Q + PNT +N LI CK
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENR 383
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
LE A +++ ++ S+ P+++T++ LI+G CK R + +ELF EM S ++ + +TY
Sbjct: 384 LEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLRGVIANTVTY 441
Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
N L+ GFC+ GK++ AKK+ + M + P++ +Y L++G C G+L++A E+F +++
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
++ D Y +I+ C A +VD+A +L + +G K D +NI++ LCR+ + +
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
A + K+ +G ++ +Y I++ + A EL+ M GF P ++ ++++
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVI 620
Query: 458 RLCKAG 463
+ +G
Sbjct: 621 NMLSSG 626
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 111/227 (48%)
Query: 287 GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIG 346
G K D A + M + P V ++ L + K + + + +M++ +
Sbjct: 66 GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125
Query: 347 YTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLW 406
+ +INCFCR ++ A + ++ + G + D V FN +L GLC E ++ EAL +++++
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 407 YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAE 466
G + ++N C G++ A+ L+ M+ GF P+ T +L +CK+G
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 467 DAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
A L + E K ++ ++++++ +C+ L AF L +E+ IK
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 222/430 (51%), Gaps = 18/430 (4%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
+ G+ + T+ T++ L + K A++ +M C+ G+ +N + +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
L L + +K+ E ++A N +I+S VD A N K + ++P
Sbjct: 243 L---ALNLLNKM-----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRP 293
Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
N ++ LI C G A ++L +M + +++ PNL+T++ LID K G+F EA +L
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
+++M+ K I PD TYN L++GFC ++D+AK++ EFM + C P+V Y TL+ GFC
Sbjct: 353 YDDMI-KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
K ++++ E+F EM + L DT+ YTTLI G D A ++ K+M G DI+
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
T++I+L GLC GK+E+AL + + + I L+ Y ++ C+ G+++ +L +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
+G P+ T N ++ LC + ++A L + E G P S ++ L+ R
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 501 LFAFELLDEL 510
+ EL+ E+
Sbjct: 592 AASAELIREM 601
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 175/355 (49%), Gaps = 39/355 (10%)
Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
+PN + +++ CKRG + A +L +M+ +++ +++ ++T+ID LCK +A+
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHVDDAL 280
Query: 259 ELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNG 318
LF+EM +K I P+ +TY+ LI C G+ A +++ M NPN+ + L++
Sbjct: 281 NLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 319 FCKEGKLQEAKEVFDEM-----------KNFLLK------------------------PD 343
F KEGK EA++++D+M N L+ PD
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
+ Y TLI FC++ RV++ EL +EM RG D VT+ ++ GL +G + A + +
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
++ DG+ + +Y I+L+ C G+LEKA+E+ M ++ +CKAG
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
+D L G KP ++ ++ +C R L A+ LL ++ KE G +
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPL 572
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 157/294 (53%), Gaps = 2/294 (0%)
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
L+ A + M KS+ P+++ ++ L+ + K +F I L E+M + +I+ TY
Sbjct: 66 LDDAIGLFGGMVKSR-PLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTY 123
Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
N+LI+ FCR ++ A ++ M G P++ ++L+NG+C ++ +A + D+M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
+PDTI +TTLI+ + EA+ L+ M +RGC+ ++VT+ +++ GLC+ G +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
AL +L K+ I + + +++ C+ ++ A+ L + M +G P+ T + L+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
LC G DA+ L ++E P ++ L++ + K + A +L D+++
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 40/369 (10%)
Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
+R PS+ + L+ + + + D+ + L Q L + +NILI C+R +
Sbjct: 79 SRPLPSIVEFNKLLSAIAKMKKFDVVIS-LGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
A +L +M K + Y P+++T S+L++G C R +A+ L ++MV PD +T+
Sbjct: 138 LALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFT 194
Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG----------KLQEA 328
LI G K A +++ M GC PN+ Y ++NG CK G K++ A
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 329 K-------------------------EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
K +F EM+ ++P+ + Y++LI+C C GR +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
+LL +M E+ ++VTFN ++ +EGK EA + + + I + +Y ++N
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
C L+KA ++ M+ + P T N L+ CK+ ED + G +
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 484 SDSWALLVE 492
+ ++ L++
Sbjct: 435 TVTYTTLIQ 443
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 156/318 (49%), Gaps = 2/318 (0%)
Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
R P+ FN L+ K + + ++M++ ++ + L TY+ LI+ C+ +
Sbjct: 80 RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-GLYTYNILINCFCRRSQISL 138
Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
A+ L +M+ K P +T + L++G+C G ++ A +++ M G P+ +TTL+
Sbjct: 139 ALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
+G K EA + D M +P+ + Y ++N C+ G D AL LL +M+ +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
AD+V FN I+ LC+ +++AL + +++ GI N +Y +++ C G A +L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
L M+ + P+ T N L+ K G +A +++ P+ ++ LV C
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 497 GRKLLFAFELLDELVIKE 514
+L A ++ + +V K+
Sbjct: 378 HDRLDKAKQMFEFMVSKD 395
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 131/263 (49%), Gaps = 3/263 (1%)
Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
+ +AI LF MV K + LP + +N L+ + K D + E M+ ++ Y
Sbjct: 65 KLDDAIGLFGGMV-KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTY 123
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
L+N FC+ ++ A + +M +P + ++L+N +C R+ +A+ L+ +M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
G + D +TF ++ GL K EA+ +++++ G N +Y +V+N C++G+ +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLV 491
A+ LL M N ++ LCK +D A+ LF +E G +P +++ L+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETKGIRPNVVTYSSLI 302
Query: 492 ELICRGRKLLFAFELLDELVIKE 514
+C + A +LL +++ K+
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKK 325
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%)
Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
+Y ++ + KL +A +F M P + + L++ + + D + L ++M
Sbjct: 52 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
+ + T+NI++ CR +I AL +L K+ G + + +LN C +
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
A+ L+ M+ G+ P T L+ L A +A + +V+ G +P ++ ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 491 VELICRGRKLLFAFELLDEL 510
V +C+ A LL+++
Sbjct: 232 VNGLCKRGDTDLALNLLNKM 251
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 237/483 (49%), Gaps = 44/483 (9%)
Query: 67 SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETC 126
++IKC+K+P ALE+FN++ ++ GF H +TY ++++KL Y KFEA++ VL M E
Sbjct: 12 AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENV 70
Query: 127 KFH--EGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL 184
H EG+++ MK++ + + +F ++ E P++ + + +++L++S D
Sbjct: 71 GNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCE-PTVFSYNAIMSVLVDSGYFDQ 129
Query: 185 AQN-FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYST 243
A +++ ++ + P+ F I +K CK +A +L M SQ N++ Y T
Sbjct: 130 AHKVYMRMRDRGI--TPDVYSFTIRMKSFCKTSRPHAALRLLNNMS-SQGCEMNVVAYCT 186
Query: 244 LIDG-----------------------------------LCKNGRFREAIELFEEMVSKD 268
++ G LCK G +E +L ++++ K
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI-KR 245
Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
+LP+ TYN+ I G C+ G++D A +++ + G P+V Y L+ G CK K QEA
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
+ +M N L+PD+ Y TLI +C+ G V A ++ + G D T+ ++ G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
LC EG+ AL + + GI N Y ++ +G + +A +L M +G +P
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
T N L+ LCK G DA + ++ G+ P+ ++ +L+ K+ A E+LD
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 509 ELV 511
++
Sbjct: 486 VML 488
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 180/311 (57%), Gaps = 2/311 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
PN +N+ I+ C+RG L+ A ++ + + Q P++ITY+ LI GLCKN +F+EA
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIE-QGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
+MV+ + + PD+ TYN LI G+C+GG V A++I+ NG P+ F Y +L++G
Sbjct: 308 YLGKMVN-EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
C EG+ A +F+E +KP+ I Y TLI G + EA +L EM E+G ++
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
TFNI++ GLC+ G + +A G+++ + G + + ++ I+++ + ++E A+E+L +
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
ML G P T N LL LCK ED +VE G P ++ +L+E +CR RK
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 500 LLFAFELLDEL 510
L A LL+E+
Sbjct: 547 LDEALGLLEEM 557
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 164/320 (51%), Gaps = 10/320 (3%)
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
L P FNIL+ CK G + A ++K M S+ +P++ T++ LI G + A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMI-SKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+E+ + M+ + + PD TYN L++G C+ K + + + M GC PN+F + L+
Sbjct: 481 LEILDVMLD-NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER-GCK 376
C+ KL EA + +EMKN + PD + + TLI+ FC+ G +D A L ++M+E
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
+ T+NII+ + + A + +++ + + +YR++++ C+ G + +
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKF 659
Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
L M+ GF+P T ++ LC +AA + +V+ G PE+ V IC
Sbjct: 660 LLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICD 713
Query: 497 -GRKLLFAFELLDELVIKES 515
+K + A +L+ E ++K+S
Sbjct: 714 VDKKEVAAPKLVLEDLLKKS 733
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
+E + T+ E KG N T+ +L+ L RY+K + +L +M ++ F L+
Sbjct: 515 VMETYKTMVE-KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
F + +F K+ + S + ++ E V +A+ +
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC- 632
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
L P+ + +++ CK G + ++ L EM ++ P+L T +I+ LC R EA
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF-IPSLTTLGRVINCLCVEDRVYEA 691
Query: 258 IELFEEMVSKDQILPDAL 275
+ MV K ++P+A+
Sbjct: 692 AGIIHRMVQKG-LVPEAV 708
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 255/554 (46%), Gaps = 82/554 (14%)
Query: 11 CCR--FSSFSTSSSSLPWISPLEVIKANTP--KADPPVETSDTCVDARKRSRFISHGAAI 66
CC FS+FS + +S E +++ KAD ++ + +R I
Sbjct: 41 CCERGFSAFSDRN-----LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLF 95
Query: 67 SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK----FEAVDAVLRQMT 122
S I K+ L + + E KG HN T + +++ R +K F A+ +++ +
Sbjct: 96 SAIAKTKQYDLVLALCKQM-ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LG 153
Query: 123 YETCKFHEGIFLNLM----KHFSNCSLHERVLEMFHKIHPITRE---------------- 162
YE +N + + L +R++EM HK IT
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 163 -----------KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKH 211
+P+ LN++ +S Q LA L+ + +K + ++I+I
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDG 272
Query: 212 HCKRGTLESAFEVLKEMKKSQMSY----------------------------------PN 237
CK G+L++AF + EM+ ++ PN
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
++T+S LID K G+ REA EL +EM+ + I PD +TY LIDGFC+ +D+A +++
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
+ M + GC+PN+ + L+NG+CK ++ + E+F +M + DT+ Y TLI FC
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
G+++ A EL +EM R +IVT+ I+L GLC G+ E+AL + EK+ + L+ Y
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
I+++ C +++ A +L + +G P T N ++ LCK G +A + + E
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Query: 478 MGFKPESDSWALLV 491
G P+ ++ +L+
Sbjct: 572 DGHAPDGWTYNILI 585
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 184/367 (50%), Gaps = 16/367 (4%)
Query: 151 EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKP---NTCIFNI 207
+M H +R P++ S + + ++ Q DL K + LK N +I
Sbjct: 78 DMIH-----SRPLPTVIDFSRLFSAIAKTKQYDLVLALCK----QMELKGIAHNLYTLSI 128
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
+I C+ L AF + ++ K + Y PN IT+STLI+GLC GR EA+EL + MV
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIK--LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
PD +T N L++G C GK A +++ M GC PN Y ++N CK G+
Sbjct: 187 MGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
A E+ +M+ +K D + Y+ +I+ C+ G +D A L EM+ +G +I+T+NI++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
GG C G+ ++ +L + I N ++ ++++ ++G+L +A EL + M+ RG
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
P T L+ CK + A + +V G P ++ +L+ C+ ++ EL
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 507 LDELVIK 513
++ ++
Sbjct: 426 FRKMSLR 432
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 213/437 (48%), Gaps = 28/437 (6%)
Query: 73 KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKF---- 128
KE + L I V + G N TY +L+ + + + +LR+M K
Sbjct: 208 KEAEAMLLIDKMV--EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 129 HEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCL---NLLI----ESNQ 181
+ I L KH S + +F+++ +K I+T + N+LI + +
Sbjct: 266 YSIIIDGLCKHGS----LDNAFNLFNEME--------MKGITTNIITYNILIGGFCNAGR 313
Query: 182 VDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
D L+ + ++ PN F++LI K G L A E+ KEM ++ P+ ITY
Sbjct: 314 WDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA-PDTITY 371
Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
++LIDG CK +A ++ + MVSK P+ T+N+LI+G+C+ ++D ++ M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
G + Y TL+ GFC+ GKL AKE+F EM + + P+ + Y L++ C G +
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
+ALE+ +++++ + DI +NII+ G+C K+++A + L G+ +Y I++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
C+KG L +A L R M G P T N L+ G A + + L GF
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 482 PESDSWALLVELICRGR 498
++ + ++++++ GR
Sbjct: 611 VDASTIKMVIDMLSDGR 627
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 175/317 (55%), Gaps = 4/317 (1%)
Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRF 254
L +PNT F+ LI C G + A E++ M +M + P+LIT +TL++GLC +G+
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRM--VEMGHKPDLITINTLVNGLCLSGKE 209
Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
EA+ L ++MV P+A+TY +++ C+ G+ A +++ M+ + Y+
Sbjct: 210 AEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
+++G CK G L A +F+EM+ + + I Y LI FC AGR D+ +LL++M +R
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
++VTF++++ +EGK+ EA + +++ + GI + +Y +++ C++ L+KA
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
+++ LM+ +G P+ T N L+ CKA +D + G ++ ++ L++
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 495 CRGRKLLFAFELLDELV 511
C KL A EL E+V
Sbjct: 449 CELGKLNVAKELFQEMV 465
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 96/187 (51%)
Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
K +A ++F +M + P I ++ L + + + D L L K+M+ +G ++ T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
I++ CR K+ A + K+ G N ++ ++N C +G + +A+EL+ M+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
G P T N L+ LC +G +A + + +VE G +P + ++ ++ ++C+ + A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 504 FELLDEL 510
ELL ++
Sbjct: 248 MELLRKM 254
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%)
Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
+ D+A++L ++M ++ F+ + + + + + L + +++ GI N +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
I++N C+ +L A + ++ G+ P+ T + L+ LC G +A + +VEM
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
G KP+ + LV +C K A L+D++V
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 216/424 (50%), Gaps = 12/424 (2%)
Query: 91 FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHE 147
+ N T+ T++ L + K A++ +M C+ F G +N + + L
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTCIFN 206
+L+ K + + + +T ++ L V+ A N F + N+ +R PN +N
Sbjct: 241 SLLKKMEK----GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR--PNVVTYN 294
Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
LI+ C G A +L +M + +++ PN++T+S LID K G+ EA +L++EM+
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMI- 352
Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
K I PD TY+ LI+GFC ++D AK + E M + C PNV Y TL+ GFCK +++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
E E+F EM L +T+ Y TLI +AG D A ++ K+M G DI+T++I+L
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
GLC+ GK+E+AL + E L + + +Y I++ C+ G++E +L + +G
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
P+ ++ C+ G+ E+A + E G P S ++ L+ R + EL
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 507 LDEL 510
+ E+
Sbjct: 593 IKEM 596
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 219/431 (50%), Gaps = 10/431 (2%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G+ + T +++L+ K+ A++ QM + + F N + H LH +
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF-NTLIH--GLFLHNKA 201
Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
E I + +P L T +N L + +DLA + LK + +++ + I+
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYTT 260
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
+I C + A + EM + PN++TY++LI LC GR+ +A L +M+ +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIR-PNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
+I P+ +T++ LID F + GK+ A+K+ + M +P++F Y++L+NGFC +L E
Sbjct: 320 -KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
AK +F+ M + P+ + Y TLI FC+A RV+E +EL +EM +RG + VT+N ++
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
GL + G + A + +K+ DG+ + +Y I+L+ C+ G+LEKA+ + + P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
T N ++ +CKAG ED L G KP + ++ CR A L
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 508 DELVIKESGTI 518
E+ KE GT+
Sbjct: 559 REM--KEDGTL 567
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 202/402 (50%), Gaps = 4/402 (0%)
Query: 97 TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKI 156
TY T+++ L + + ++L++M + I+ ++ N L +F ++
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 157 HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRG 216
+P++ ++ + L + A L + ++ PN F+ LI K G
Sbjct: 282 DN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEG 339
Query: 217 TLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALT 276
L A ++ EM K + P++ TYS+LI+G C + R EA +FE M+SKD P+ +T
Sbjct: 340 KLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVT 397
Query: 277 YNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMK 336
YN LI GFC+ +V+ ++ M G N Y TL+ G + G A+++F +M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 337 NFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIE 396
+ + PD I Y+ L++ C+ G++++AL + + +++ + DI T+NI++ G+C+ GK+E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 397 EALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELL 456
+ + L G+ N Y +++ C+KG E+A L R M G LP+ T N L+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 457 VRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
+ G +A + + GF ++ + ++++ ++ GR
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 40/369 (10%)
Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
+R PS+ + L+ + + N+ DL + L Q+LR+ + +NILI C+R L
Sbjct: 74 SRPLPSIVEFNKLLSAIAKMNKFDLVIS-LGERMQNLRISYDLYSYNILINCFCRRSQLP 132
Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
A VL +M K + Y P+++T S+L++G C R EA+ L ++M + P+ +T+N
Sbjct: 133 LALAVLGKMMK--LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM-EYQPNTVTFN 189
Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ------------ 326
LI G K A +++ M GC P++F Y T++NG CK G +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 327 -----------------------EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEA 363
+A +F EM N ++P+ + Y +LI C C GR +A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 364 LELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
LL +M ER ++VTF+ ++ +EGK+ EA + +++ I + +Y ++N
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPE 483
C L++A + LM+ + P+ T N L+ CKA E+ + + G
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 484 SDSWALLVE 492
+ ++ L++
Sbjct: 430 TVTYNTLIQ 438
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 190/364 (52%), Gaps = 13/364 (3%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
AL +F T + KG N TY +++ L Y ++ +L M + F L+
Sbjct: 274 ALNLF-TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 138 KHFSNCSLHERVLEMFHKIHP--ITRE-KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
F + E L K++ I R P + S+ +N +++D A++ +
Sbjct: 333 DAF----VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
PN +N LIK CK +E E+ +EM + + N +TY+TLI GL + G
Sbjct: 389 K-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAGDC 446
Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
A ++F++MVS D + PD +TY++L+DG C+ GK+++A + E+++ + P+++ Y
Sbjct: 447 DMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
++ G CK GK+++ ++F + +KP+ I YTT+I+ FCR G +EA L +EMKE G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA- 433
+ T+N ++ R+G + +++++ G + ++ +V+N G LEK+
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM-LHDGRLEKSY 624
Query: 434 IELL 437
+E+L
Sbjct: 625 LEML 628
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 155/294 (52%), Gaps = 2/294 (0%)
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
L+ A ++ EM +S+ P+++ ++ L+ + K +F I L E M + +I D +Y
Sbjct: 61 LDDAVDLFGEMVQSR-PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL-RISYDLYSY 118
Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
N+LI+ FCR ++ A ++ M G P++ ++L+NG+C ++ EA + D+M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
+P+T+ + TLI+ + EA+ L+ M RGC+ D+ T+ ++ GLC+ G I+
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
AL +L+K+ I + Y +++ C + A+ L M +G P+ T N L+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
LC G DA+ L ++E P +++ L++ + KL+ A +L DE++
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 75/155 (48%)
Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
++D+A++L EM + IV FN +L + + K + + + E++ I + SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
I++N C++ +L A+ +L M+ G+ P T + LL C +A + + M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
++P + ++ L+ + K A L+D +V +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 210/421 (49%), Gaps = 44/421 (10%)
Query: 98 YATILDKLARYKKFEAVDAVLRQMTYETCKF-HEGIFLNLMKH-FSNCSLHERVLEMFHK 155
++ +L K+A+ K ++ V ++ M E C H+ N++ + CS L + K
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHM--EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
+ E P + +S+ +N + N+V A + + + + +P+ I+N +I CK
Sbjct: 130 MMKFGYE-PDVVTVSSLINGFCQGNRVFDAIDLVS-KMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 216 GTLESAFEVLKEMKKS-----QMSY-----------------------------PNLITY 241
G + A E+ M++ ++Y PN+IT+
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 242 STLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK 301
+ +ID K G+F EA++L+EEM ++ + PD TYN LI+G C G+VD AK++++ M
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 302 NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVD 361
GC P+V Y TL+NGFCK ++ E ++F EM L DTI Y T+I + +AGR D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 362 EALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVL 421
A E+ M R +I T++I+L GLC ++E+AL + E + I L+ +Y IV+
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 422 NFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFK 481
+ C+ G +E A +L R + C+G P + ++ C+ + + + + E G
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 482 P 482
P
Sbjct: 484 P 484
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 164/334 (49%), Gaps = 36/334 (10%)
Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREA 257
+P+ + LI C+ + A +++ +M+ +M + P+++ Y+T+IDG CK G +A
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKME--EMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+ELF+ M +D + DA+TYN L+ G C G+ A ++M M PNV +T +++
Sbjct: 194 VELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
F KEGK EA ++++EM + PD Y +LIN C GRVDEA ++L M +GC
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
D+VT+N ++ G C+ +++E + ++ G+ + +Y ++ Q G + A E+
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 438 RLMLCRGFLPHYA--------------------------------TSNELLVRLCKAGMA 465
M R + Y+ T N ++ +CK G
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
EDA L G KP+ S+ ++ CR R+
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 142/256 (55%), Gaps = 1/256 (0%)
Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
+L +Y+ +I+ LC+ RF A+ + +M+ K PD +T + LI+GFC+G +V A +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMM-KFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
+ M+ G P+V Y T+++G CK G + +A E+FD M+ ++ D + Y +L+ C
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
+GR +A L+++M R +++TF ++ +EGK EA+ + E++ + + +
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
Y ++N C G +++A ++L LM+ +G LP T N L+ CK+ ++ +
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 477 EMGFKPESDSWALLVE 492
+ G ++ ++ +++
Sbjct: 342 QRGLVGDTITYNTIIQ 357
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 149/299 (49%), Gaps = 12/299 (4%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
A+E+F+ + E+ G + TY +++ L ++ ++R M + F ++
Sbjct: 193 AVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 138 KHFSNCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
F ++++ ++ TR P + ++ +N L +VD A+ L
Sbjct: 252 DVFVKEGKFSEAMKLYEEM---TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
L P+ +N LI CK ++ ++ +EM + + + ITY+T+I G + GR
Sbjct: 309 GCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL-VGDTITYNTIIQGYFQAGRPD 366
Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
A E+F M S+ P+ TY++L+ G C +V++A + E M+ + ++ Y +
Sbjct: 367 AAQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
++G CK G +++A ++F + LKPD + YTT+I+ FCR + D++ L ++M+E G
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 130/258 (50%), Gaps = 1/258 (0%)
Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
E I+LF +M+ + + LP + ++ ++ + D + M+ G ++++Y +
Sbjct: 52 EEIDLFCKMI-QSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
+N C+ + A V +M F +PD + ++LIN FC+ RV +A++L+ +M+E G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
+ D+V +N I+ G C+ G + +A+ + +++ DG+ + +Y ++ C G A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
L+R M+ R +P+ T ++ K G +A + P+ ++ L+ +C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 496 RGRKLLFAFELLDELVIK 513
++ A ++LD +V K
Sbjct: 291 MHGRVDEAKQMLDLMVTK 308
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
L+E ++F +M P + ++ +++ ++ D + L M+ G D+ ++NI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
++ LCR + AL ++ K+ G + + ++N CQ + AI+L+ M G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFA 503
F P N ++ CK G+ D A+ LF +E G + ++ ++ LV +C + A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVND-AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 504 FELLDELVIKE 514
L+ ++V+++
Sbjct: 229 ARLMRDMVMRD 239
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 236/462 (51%), Gaps = 10/462 (2%)
Query: 51 VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
V+A F ++ + I K+ A ++FN + KG N Y ++ L ++
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP-LKGCRRNEVAYTHLIHGLCVARR 303
Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
+ + +M + C + L+K L + ++ T KP++ +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE-TGIKPNIHTYT 362
Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
++ L + + A+ L Q L L PN +N LI +CKRG +E A +V++ M
Sbjct: 363 VLIDSLCSQCKFEKARELL---GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
+ ++S PN TY+ LI G CK+ +A+ + +M+ + ++LPD +TYN LIDG CR G
Sbjct: 420 ESRKLS-PNTRTYNELIKGYCKSN-VHKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRSG 476
Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
D A +++ M + G P+ + YT++++ CK +++EA ++FD ++ + P+ + YT
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
LI+ +C+AG+VDEA +L++M + C + +TFN ++ GLC +GK++EA + EK+
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
G+ ++ I+++ + G+ + A + ML G P T + C+ G DA
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
+ + E G P+ +++ L++ + FAF++L +
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 172/318 (54%), Gaps = 5/318 (1%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P + +LIK C A ++KEM+++ + PN+ TY+ LID LC +F +A E
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK-PNIHTYTVLIDSLCSQCKFEKARE 379
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
L +M+ K ++P+ +TYN LI+G+C+ G ++ A ++E M++ +PN Y L+ G+
Sbjct: 380 LLGQMLEKG-LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
CK + +A V ++M + PD + Y +LI+ CR+G D A LL M +RG D
Sbjct: 439 CK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
T+ ++ LC+ ++EEA + + L G+ N Y +++ C+ G++++A +L
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
ML + LP+ T N L+ LC G ++A + +V++G +P + +L+ + +
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 500 LLFAFELLDELVIKESGT 517
A+ +++ SGT
Sbjct: 618 FDHAYSRFQQML--SSGT 633
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 226/493 (45%), Gaps = 58/493 (11%)
Query: 60 ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
IS SL + +P+ AL + +S+ + H+ +YA++L L + V +R
Sbjct: 88 ISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLIN-NGYVGVVFKIR 146
Query: 120 QMTYETC-KFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
+ ++C + ++ VL++ K++ R + K I C N L+
Sbjct: 147 LLMIKSCDSVGDALY---------------VLDLCRKMNKDERFELKYKLIIGCYNTLLN 191
Query: 179 S----------NQV-------DLAQNFLKY---------------SNQHLR------LKP 200
S QV + N Y +NQ++ L P
Sbjct: 192 SLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP 251
Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
+ + LI +C+R L+SAF+V EM N + Y+ LI GLC R EA++L
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR-NEVAYTHLIHGLCVARRIDEAMDL 310
Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
F +M D+ P TY VLI C + A +++ M+ G PN+ YT L++ C
Sbjct: 311 FVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
+ K ++A+E+ +M L P+ I Y LIN +C+ G +++A+++++ M+ R +
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
T+N ++ G C+ + +A+G+L K+ + + +Y +++ C+ G + A LL LM
Sbjct: 430 TYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
RG +P T ++ LCK+ E+A L + G P + L++ C+ K+
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 501 LFAFELLDELVIK 513
A +L++++ K
Sbjct: 549 DEAHLMLEKMLSK 561
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 221/453 (48%), Gaps = 48/453 (10%)
Query: 74 EPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIF 133
+P+C + +VS + +T T+ + R ++F +V +LR + E
Sbjct: 6 QPRCNSGLTGSVSAFEVLKKKFSTDVTVPSPVTR-RQFCSVSPLLRNLPEEES------- 57
Query: 134 LNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDL------AQN 187
+ S+ R+L + K P + PSLK++ + ++ S+ L A N
Sbjct: 58 -------DSMSVPHRLLSILSK--PNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALN 108
Query: 188 FLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKS---------------- 231
F + +Q+ R K + + L+ G + F++ M KS
Sbjct: 109 FSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRK 168
Query: 232 -------QMSYPNLIT-YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
++ Y +I Y+TL++ L + G E +++ EM+ +D++ P+ TYN +++G
Sbjct: 169 MNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML-EDKVCPNIYTYNKMVNG 227
Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
+C+ G V+ A + + + G +P+ F YT+L+ G+C+ L A +VF+EM + +
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRN 287
Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
+ YT LI+ C A R+DEA++L +MK+ C + T+ +++ LC + EAL +++
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
++ GI N +Y ++++ C + + EKA ELL ML +G +P+ T N L+ CK G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
M EDA + + P + ++ L++ C+
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 200/444 (45%), Gaps = 27/444 (6%)
Query: 87 EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
E+ G N TY ++D L KFE +L QM + + + L+ + +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 147 ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK--PNTCI 204
E +++ + E L + N LI+ + N+ L K P+
Sbjct: 410 EDAVDVVELM-----ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVT 464
Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
+N LI C+ G +SA+ +L M + P+ TY+++ID LCK+ R EA +LF+ +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGL-VPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
K + P+ + Y LIDG+C+ GKVD A ++E M + C PN + L++G C +GK
Sbjct: 524 EQKG-VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
L+EA + ++M L+P T LI+ + G D A ++M G K D T+
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
+ CREG++ +A M+ K+ +G+ + +Y ++ G+ A ++L+ M G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 445 FLPHYATSNELLVRLCK----------------AGMAE-DAAIALF-GLVEMGFKPESDS 486
P T L+ L + + M E D + L +VE P + S
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 487 WALLVELICRGRKLLFAFELLDEL 510
+ L+ IC L A ++ D +
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHM 786
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 186/407 (45%), Gaps = 59/407 (14%)
Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
P ++ ++ L +S +V+ A + S + + PN ++ LI +CK G ++ A
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFD-SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
+L++M S+ PN +T++ LI GLC +G+ +EA L E+MV K + P T +LI
Sbjct: 554 MLEKML-SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV-KIGLQPTVSTDTILIHR 611
Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
+ G D A + M ++G P+ YTT + +C+EG+L +A+++ +M+ + PD
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLC--REGK------- 394
Y++LI + G+ + A ++LK M++ GC+ TF ++ L + GK
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 395 ---------IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELE-------------- 431
+ + +LEK+ + N SY ++ C+ G L
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 432 ----------------------KAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
+A +++ M+C G LP + L+ L K G E
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
L++ G+ + +W ++++ + + + +EL + V++++G
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN--VMEKNG 896
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
++ E+L++M + ++ PN +Y LI G+C+ G R A ++F+ M + I P L +
Sbjct: 741 FDTVVELLEKMVEHSVT-PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
N L+ C+ K + A K+++ M G P + + L+ G K+G+ + VF +
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
D + + +I+ + G V+ EL M++ GCK T+++++ G
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 221/430 (51%), Gaps = 18/430 (4%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
+ G+ + T+ T++ L + K A++ +M C+ G+ +N + +
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQNFLKYSNQHLRLKP 200
L + +K+ E ++A N +I+S VD A N K + ++P
Sbjct: 168 L---AFNLLNKM-----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRP 218
Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
N ++ LI C G A ++L +M + +++ PNL+T++ LID K G+F EA +L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
++M+ K I PD TYN LI+GFC ++D+AK++ EFM + C P++ Y TL+ GFC
Sbjct: 278 HDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
K ++++ E+F EM + L DT+ YTTLI G D A ++ K+M G DI+
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
T++I+L GLC GK+E+AL + + + I L+ Y ++ C+ G+++ +L +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
+G P+ T N ++ LC + ++A L + E G P+S ++ L+ R
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 501 LFAFELLDEL 510
+ EL+ E+
Sbjct: 517 AASAELIREM 526
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 219/474 (46%), Gaps = 55/474 (11%)
Query: 87 EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNC 143
++ G +HN TY +++ R + A+L +M YE LN H
Sbjct: 37 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 144 S----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
S L ++++EM ++ IT +T ++ L N+ A + Q +
Sbjct: 97 SDAVALVDQMVEMGYRPDTIT--------FTTLIHGLFLHNKASEAVALVDRMVQR-GCQ 147
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
PN + +++ CKRG ++ AF +L +M+ +++ +++ ++T+ID LCK +A+
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHVDDALN 206
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
LF+EM +K I P+ +TY+ LI C G+ A +++ M NPN+ + L++ F
Sbjct: 207 LFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN--------------------------- 352
KEGK EA+++ D+M + PD Y +LIN
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 353 --------CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
FC++ RV++ EL +EM RG D VT+ ++ GL +G + A + ++
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
+ DG+ + +Y I+L+ C G+LEKA+E+ M ++ +CKAG
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
+D L G KP ++ ++ +C R L A+ LL ++ KE G +
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPL 497
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 147/276 (53%), Gaps = 1/276 (0%)
Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
P++ ++ L+ + K +F I L E+M + I + TYN+LI+ FCR ++ A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
++ M G P++ ++L+NG+C ++ +A + D+M +PDTI +TTLI+
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
+ EA+ L+ M +RGC+ ++VT+ +++ GLC+ G I+ A +L K+ I +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
+ +++ C+ ++ A+ L + M +G P+ T + L+ LC G DA+ L +
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+E P ++ L++ + K + A +L D+++
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 156/315 (49%), Gaps = 2/315 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ FN L+ K + + ++M++ +S+ NL TY+ LI+ C+ + A+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLALA 66
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
L +M+ K P +T + L++G+C G ++ A +++ M G P+ +TTL++G
Sbjct: 67 LLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
K EA + D M +P+ + Y ++N C+ G +D A LL +M+ +AD+
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
V FN I+ LC+ +++AL + +++ GI N +Y +++ C G A +LL
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
M+ + P+ T N L+ K G +A +++ P+ ++ L+ C +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 500 LLFAFELLDELVIKE 514
L A ++ + +V K+
Sbjct: 306 LDKAKQMFEFMVSKD 320
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
K + LP +N L+ + K D + E M+ G + N++ Y L+N FC+ ++
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
A + +M +P + ++L+N +C R+ +A+ L+ +M E G + D +TF ++
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
GL K EA+ +++++ G N +Y +V+N C++G+++ A LL M
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLVELICRGRKLLFAFE 505
N ++ LCK +D A+ LF +E G +P +++ L+ +C + A +
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 506 LLDELVIKE 514
LL +++ K+
Sbjct: 242 LLSDMIEKK 250
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 218/418 (52%), Gaps = 5/418 (1%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
A+++F+ + + + F + + +L + + KK++ V ++ ++M + F ++
Sbjct: 69 AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
F C L + K+ + E P I + +N N+V A + + +
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVD-KMVEIG 185
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
KP+ +N +I CK + AF+ KE+++ + PN++TY+ L++GLC + R+ +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR-PNVVTYTALVNGLCNSSRWSDA 244
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
L +M+ K +I P+ +TY+ L+D F + GKV AK++ E M +P++ Y++L+N
Sbjct: 245 ARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
G C ++ EA ++FD M + D + Y TLIN FC+A RV++ ++L +EM +RG +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
+ VT+N ++ G + G +++A ++ + GI + +Y I+L C GELEKA+ +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
M R T ++ +CK G E+A L G KP+ ++ ++ +C
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 172/302 (56%), Gaps = 3/302 (0%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
KP + A + ++ L ++ +V+ A +F K + ++PN + L+ C A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
+L +M K +++ PN+ITYS L+D KNG+ EA ELFEEMV + I PD +TY+ LI+
Sbjct: 246 RLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVTYSSLIN 303
Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
G C ++D A ++ + M + GC +V +Y TL+NGFCK ++++ ++F EM L
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
+T+ Y TLI F +AG VD+A E +M G DI T+NI+LGGLC G++E+AL +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
E + + L+ +Y V+ C+ G++E+A L + +G P T ++ LC
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 463 GM 464
G+
Sbjct: 484 GL 485
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 175/336 (52%), Gaps = 9/336 (2%)
Query: 181 QVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
QV LA + L + L+L +P+ L+ C+R + A ++ +M ++ Y P+
Sbjct: 135 QVSLALSIL---GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM--VEIGYKPD 189
Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
++ Y+ +ID LCK R +A + F+E + + I P+ +TY L++G C + A +++
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
M PNV Y+ L++ F K GK+ EAKE+F+EM + PD + Y++LIN C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
R+DEA ++ M +GC AD+V++N ++ G C+ ++E+ + + ++ G+ N +Y
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
++ Q G+++KA E M G P T N LL LC G E A + + +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
+ ++ ++ +C+ K+ A+ L L +K
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 171/329 (51%), Gaps = 13/329 (3%)
Query: 147 ERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
+RV + F I R+ +P++ + +N L S++ A L + ++ PN
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVIT 262
Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
++ L+ K G + A E+ +EM + + P+++TYS+LI+GLC + R EA ++F+ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
VSK L D ++YN LI+GFC+ +V+ K+ M G N Y TL+ GF + G
Sbjct: 322 VSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
+ +A+E F +M F + PD Y L+ C G +++AL + ++M++R DIVT+
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
++ G+C+ GK+EEA + L G+ + +Y +++ C KG L + L M G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 445 FLPHYAT--------SNELLVRLCKAGMA 465
+ + T S EL+ ++ G A
Sbjct: 501 LMKNDCTLSDGDITLSAELIKKMLSCGYA 529
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
+ +AI+LF +MV K + P + +N L+ + K D + + M+ G +++ +
Sbjct: 65 KLNDAIDLFSDMV-KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
++N FC ++ A + +M +PD + +L+N FCR RV +A+ L+ +M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
G K DIV +N I+ LC+ ++ +A +++ GI N +Y ++N C
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
A LL M+ + P+ T + LL K G +A +V M P+ +++ L+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 493 LICRGRKLLFAFELLDELVIK 513
+C ++ A ++ D +V K
Sbjct: 304 GLCLHDRIDEANQMFDLMVSK 324
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%)
Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
++ KL +A ++F +M P + + L++ + + D + L K+M+ G + D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
TFNI++ C ++ AL +L K+ G ++ + ++N C++ + A+ L+ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
+ G+ P N ++ LCK DA + G +P ++ LV +C +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 501 LFAFELLDELVIKE 514
A LL +++ K+
Sbjct: 242 SDAARLLSDMIKKK 255
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 222/428 (51%), Gaps = 14/428 (3%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
+ G+ + T+ T++ L ++ K A++ +M + C+ + ++ +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 148 RVLEMFHKIHPITREKPSLKA----ISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNT 202
L + +K+ EK ++A ST ++ L + VD A N F + N+ +R P+
Sbjct: 223 LALNLLNKM-----EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR--PDV 275
Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
++ LI C G A +L +M + +++ PN++T+++LID K G+ EA +LF+
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKIN-PNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
EM+ + I P+ +TYN LI+GFC ++D A++I M + C P+V Y TL+NGFCK
Sbjct: 335 EMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
K+ + E+F +M L +T+ YTTLI+ F +A D A + K+M G +I+T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
N +L GLC+ GK+E+A+ + E L + + +Y I+ C+ G++E +L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
+G P N ++ CK G+ E+A + E G P+S ++ L+ R
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 503 AFELLDEL 510
+ EL+ E+
Sbjct: 574 SAELIKEM 581
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 17/481 (3%)
Query: 39 KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
K D V+ V +R + +S I K+ + F E G +HN TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTY 103
Query: 99 ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH-ERVLEMFHKIH 157
+++ L R + A+L +M K G + + N H R+ E +
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMM----KLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 158 PITR--EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHH 212
+ +P +T ++ L + N+ A + + + +K P+ + +I
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV----ERMVVKGCQPDLVTYGAVINGL 215
Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
CKRG + A +L +M+K ++ +++ YST+ID LCK +A+ LF EM +K I P
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIE-ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRP 273
Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
D TY+ LI C G+ A +++ M NPNV + +L++ F KEGKL EA+++F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
DEM + P+ + Y +LIN FC R+DEA ++ M + C D+VT+N ++ G C+
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATS 452
K+ + + + + G+ N +Y +++ Q + + A + + M+ G P+ T
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 453 NELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVI 512
N LL LCK G E A + L + +P+ ++ ++ E +C+ K+ ++L L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 513 K 513
K
Sbjct: 514 K 514
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 212/440 (48%), Gaps = 40/440 (9%)
Query: 59 FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
+++GA I+ + EP AL + N + + K + Y+T++D L +Y+ + DA
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVD--DA-- 259
Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
LNL N I P SL IS N
Sbjct: 260 ---------------LNLFTEMDN-----------KGIRPDVFTYSSL--ISCLCNYGRW 291
Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
S+ L + L+ ++ PN FN LI K G L A ++ EM + + PN+
Sbjct: 292 SDASRLLSDMLER-----KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID-PNI 345
Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
+TY++LI+G C + R EA ++F MVSKD LPD +TYN LI+GFC+ KV ++
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKD-CLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
M G N YTTL++GF + A+ VF +M + + P+ + Y TL++ C+ G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
++++A+ + + +++ + DI T+NI+ G+C+ GK+E+ + L G+ + +Y
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
+++ C+KG E+A L M G LP T N L+ + G +A + +
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Query: 479 GFKPESDSWALLVELICRGR 498
F ++ ++ L+ +++ GR
Sbjct: 585 RFAGDASTYGLVTDMLHDGR 604
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 1/278 (0%)
Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
NL TY+ +I+ LC+ + A+ + +M+ K P +T N L++GFC G ++ A +
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMM-KLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
++ M G P+ +TTL++G + K EA + + M +PD + Y +IN C+
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
G D AL LL +M++ +AD+V ++ ++ LC+ +++AL + ++ GI + +
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
Y +++ C G A LL ML R P+ T N L+ K G +A ++
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
+ P ++ L+ C +L A ++ +V K+
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 209/409 (51%), Gaps = 8/409 (1%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G+ + T +++L+ K+ A++ QM + F L+ LH +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKA 206
Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
E + + + +P+L +N L + +DLA N L + +++ N I++
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN-KMEAAKIEANVVIYST 265
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
+I CK + A + EM+ + PN+ITYS+LI LC R+ +A L +M+ +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVR-PNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
+I P+ +T+N LID F + GK+ A+K+ + M +P++F Y++L+NGFC +L E
Sbjct: 325 -KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
AK +F+ M + P+ + Y TLIN FC+A R+DE +EL +EM +RG + VT+ ++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
G + + A + +++ DG++ N +Y +L+ C+ G+LEKA+ + + P
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
T N ++ +CKAG ED L G KP+ + ++ CR
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 206/403 (51%), Gaps = 12/403 (2%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCS 144
+ G+ + T+ T++ L + K A++ +M C+ G+ +N + +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN-FLKYSNQHLRLKPNTC 203
L + +K+ E ++ ST ++ L + D A N F + N+ +R PN
Sbjct: 243 L---AFNLLNKMEAAKIE-ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR--PNVI 296
Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
++ LI C A +L +M + +++ PN++T++ LID K G+ EA +L++E
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
M+ K I PD TY+ LI+GFC ++D AK + E M + C PNV Y TL+NGFCK
Sbjct: 356 MI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
++ E E+F EM L +T+ YTTLI+ F +A D A + K+M G +I+T+N
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
+L GLC+ GK+E+A+ + E L + +Y I++ C+ G++E +L + +
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDS 486
G P N ++ C+ G+ E+A + E G P+S +
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 218/434 (50%), Gaps = 18/434 (4%)
Query: 87 EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGIFLNLMKHFSNC 143
++ G +HN TY +++ R + A+L +M YE LN H
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 144 S----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK 199
S L ++++EM ++ IT +T ++ L N+ A + Q +
Sbjct: 172 SDAVALVDQMVEMGYRPDTIT--------FTTLIHGLFLHNKASEAVALVDRMVQR-GCQ 222
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
PN + +++ CKRG ++ AF +L +M+ +++ N++ YST+ID LCK +A+
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE-ANVVIYSTVIDSLCKYRHEDDALN 281
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
LF EM +K + P+ +TY+ LI C + A +++ M NPNV + L++ F
Sbjct: 282 LFTEMENKG-VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
KEGKL EA++++DEM + PD Y++LIN FC R+DEA + + M + C ++
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
VT+N ++ G C+ +I+E + + ++ G+ N +Y +++ Q + + A + +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
M+ G P+ T N LL LCK G E A + L +P ++ +++E +C+ K
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 500 LLFAFELLDELVIK 513
+ ++L L +K
Sbjct: 521 VEDGWDLFCSLSLK 534
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 191/413 (46%), Gaps = 40/413 (9%)
Query: 39 KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
KA V D V + +++G ++ + + A + N + K N Y
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEANVVIY 263
Query: 99 ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
+T++D L +Y+ HE LNL N +
Sbjct: 264 STVIDSLCKYR-------------------HEDDALNLFTEMENKGV------------- 291
Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
+P++ S+ ++ L + A L + ++ PN FN LI K G L
Sbjct: 292 ----RPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKL 346
Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
A ++ EM K + P++ TYS+LI+G C + R EA +FE M+SKD P+ +TYN
Sbjct: 347 VEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYN 404
Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
LI+GFC+ ++D ++ M G N YTTL++GF + A+ VF +M +
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
+ P+ + Y TL++ C+ G++++A+ + + ++ + I T+NI++ G+C+ GK+E+
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
+ L G+ + Y +++ C+KG E+A L R M G LP T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 3/260 (1%)
Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
+ +AI LF MV K + LP +N L+ + K D + E M+ G + N++ Y
Sbjct: 65 KLDDAIGLFGGMV-KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY 123
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
L+N FC+ ++ A + +M +P + ++L+N +C R+ +A+ L+ +M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
G + D +TF ++ GL K EA+ +++++ G N +Y +V+N C++G+++
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLV 491
A LL M + + ++ LCK ED A+ LF +E G +P +++ L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKY-RHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 492 ELICRGRKLLFAFELLDELV 511
+C + A LL +++
Sbjct: 303 SCLCNYERWSDASRLLSDMI 322
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 153/318 (48%), Gaps = 2/318 (0%)
Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFRE 256
R P+ FN L+ K + + ++M++ +S+ NL TY+ LI+ C+ +
Sbjct: 80 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISL 138
Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLM 316
A+ L +M+ K P +T + L++G+C G ++ A +++ M G P+ +TTL+
Sbjct: 139 ALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 317 NGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
+G K EA + D M +P+ + Y ++N C+ G +D A LL +M+ +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
A++V ++ ++ LC+ ++AL + ++ G+ N +Y +++ C A L
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
L M+ R P+ T N L+ K G +A +++ P+ +++ L+ C
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 497 GRKLLFAFELLDELVIKE 514
+L A + + ++ K+
Sbjct: 378 HDRLDEAKHMFELMISKD 395
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%)
Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
+Y ++ KL +A +F M P + L++ + + D + L ++M
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
+ G ++ T+NI++ CR +I AL +L K+ G + + +LN C +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
A+ L+ M+ G+ P T L+ L A +A + +V+ G +P ++ ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 491 VELICRGRKLLFAFELLDEL 510
V +C+ + AF LL+++
Sbjct: 232 VNGLCKRGDIDLAFNLLNKM 251
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 256/561 (45%), Gaps = 75/561 (13%)
Query: 2 NSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTP--KADPPVETSDTCVDARKRSRF 59
++R +L C FS+ S +S E +++ K D V+ +R R R
Sbjct: 13 GTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRL 72
Query: 60 ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK----FEAVD 115
I S++ K+ L++ + E KG HN T + +++ R +K F A+
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 116 AVLRQMTYETCKFHEGIFLNLM----KHFSNCSLHERVLEMFHKIHPITRE--------- 162
+++ + YE +N + + L +R++EM HK IT
Sbjct: 132 KIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 163 ------------------KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
+P+ L ++ +S Q LA L+ + ++K +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER-KIKLDAVK 249
Query: 205 FNILIKHHCKRGTLESAFEVLKEM-----KKSQMSY------------------------ 235
++I+I CK G+L++AF + EM K + Y
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 236 -----PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
P+++ +S LID K G+ REA EL +EM+ + I PD +TY LIDGFC+ ++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQL 368
Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
D+A +++ M + GC PN+ + L+NG+CK + + E+F +M + DT+ Y TL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
I FC G+++ A EL +EM R + DIV++ I+L GLC G+ E+AL + EK+ +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
L+ Y I+++ C +++ A +L + +G P T N ++ LCK G +A +
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 471 ALFGLVEMGFKPESDSWALLV 491
+ E G P ++ +L+
Sbjct: 549 LFRKMEEDGHSPNGCTYNILI 569
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 237/500 (47%), Gaps = 17/500 (3%)
Query: 11 CCRFSSFSTSSSSLPWISPL----EVIKANT--------PKADPPVETSDTCVDARKRSR 58
CCR S + S++ I L + + +T + +E D V+ +
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 59 FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
I+ A ++ + + A+ + + + E GF N TY +L + + + +L
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
R+M K + ++ + +F+++ I K + +T +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIIIYTTLIRGFCY 294
Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
+ + D L+ + ++ P+ F+ LI K G L A E+ KEM + +S P+
Sbjct: 295 AGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS-PDT 352
Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
+TY++LIDG CK + +A + + MVSK P+ T+N+LI+G+C+ +D ++
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
M G + Y TL+ GFC+ GKL+ AKE+F EM + ++PD + Y L++ C G
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
++ALE+ +++++ + DI +NII+ G+C K+++A + L G+ + +Y
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
I++ C+KG L +A L R M G P+ T N L+ G A +A + +
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 479 GFKPESDSWALLVELICRGR 498
GF ++ + ++V+++ GR
Sbjct: 592 GFSVDASTVKMVVDMLSDGR 611
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 225/438 (51%), Gaps = 12/438 (2%)
Query: 76 QCALEIFNTVSEQKG-FNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFL 134
C +F++VS+ KG ++ + I+D K+ +AVD + ++MT + F
Sbjct: 22 SCYGRVFSSVSDGKGKVSYRERLRSGIVD----IKEDDAVD-LFQEMTRSRPRPRLIDFS 76
Query: 135 NLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ 194
L + ++ VL++ ++ + +L +S +N ++ LA + + +
Sbjct: 77 RLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK 135
Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGR 253
L +P+T F+ LI C G + A E++ M +M + P LIT + L++GLC NG+
Sbjct: 136 -LGYEPDTVTFSTLINGLCLEGRVSEALELVDRM--VEMGHKPTLITLNALVNGLCLNGK 192
Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
+A+ L + MV + P+ +TY ++ C+ G+ A +++ M+ + Y+
Sbjct: 193 VSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
+++G CK+G L A +F+EM+ K D I YTTLI FC AGR D+ +LL++M +R
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
D+V F+ ++ +EGK+ EA + +++ GI + +Y +++ C++ +L+KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
+L LM+ +G P+ T N L+ CKA + +D + G ++ ++ L++
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 494 ICRGRKLLFAFELLDELV 511
C KL A EL E+V
Sbjct: 432 FCELGKLEVAKELFQEMV 449
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 7/339 (2%)
Query: 178 ESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
E + VDL Q + R +P F+ L + + ++ K+M+ +++ N
Sbjct: 53 EDDAVDLFQEMTRS-----RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-N 106
Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
L T S +I+ C+ + A +++ K PD +T++ LI+G C G+V A +++
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKII-KLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
+ M G P + L+NG C GK+ +A + D M +P+ + Y ++ C++
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
G+ A+ELL++M+ER K D V ++II+ GLC++G ++ A + ++ G + Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
++ C G + +LLR M+ R P + L+ K G +A +++
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
G P++ ++ L++ C+ +L A +LD +V K G
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 206/393 (52%), Gaps = 4/393 (1%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G HN T +L+ R + + L +M + F +L+ F
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
L MF ++ + KP++ +T ++ L +S QVD A + L + + P+ +N LI
Sbjct: 171 LYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLI 228
Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
C G A ++ M K ++ YP++ T++ LID K GR EA E +EEM+ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-S 286
Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
+ PD +TY++LI G C ++D A+++ FM + GC P+V Y+ L+NG+CK K++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
++F EM + +T+ YT LI +CRAG+++ A E+ + M G +I+T+N++L GL
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
C GKIE+AL +L + +G+ + +Y I++ C+ GE+ A ++ + C+G +P
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKP 482
T +++ L K G+ +A + E G P
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 204/395 (51%), Gaps = 10/395 (2%)
Query: 96 ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
A ++ +L +++ KK++ V + QM + L+ F CS L K
Sbjct: 82 ADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141
Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHC 213
+ + E PS+ + LN ++V + L +Q + + KPN I+N +I C
Sbjct: 142 MIKLGHE-PSIVTFGSLLNGFCRGDRV---YDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 214 KRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPD 273
K +++A ++L M+K + P+++TY++LI GLC +GR+ +A + M +K +I PD
Sbjct: 198 KSKQVDNALDLLNRMEKDGIG-PDVVTYNSLISGLCSSGRWSDATRMVSCM-TKREIYPD 255
Query: 274 ALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFD 333
T+N LID + G+V A++ E M +P++ Y+ L+ G C +L EA+E+F
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 334 EMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREG 393
M + PD + Y+ LIN +C++ +V+ ++L EM +RG + VT+ I++ G CR G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
K+ A + ++ + G++ N +Y ++L+ C G++EKA+ +L M G T N
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
++ +CKAG DA L G P D W
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMP--DIWT 468
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 181/337 (53%), Gaps = 9/337 (2%)
Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
LN +Q+ LA +FL + ++L +P+ F L+ C+ + A + +M
Sbjct: 123 LNCFCRCSQLSLALSFL---GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM-- 177
Query: 231 SQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGK 289
M Y PN++ Y+T+IDGLCK+ + A++L M KD I PD +TYN LI G C G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSGR 236
Query: 290 VDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTT 349
A +++ M P+VF + L++ KEG++ EA+E ++EM L PD + Y+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 350 LINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDG 409
LI C R+DEA E+ M +GC D+VT++I++ G C+ K+E + + ++ G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
+ N +Y I++ C+ G+L A E+ R M+ G P+ T N LL LC G E A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
+ L + + G + ++ +++ +C+ ++ A+++
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 141/251 (56%), Gaps = 2/251 (0%)
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
+ P+ FN LI K G + A E +EM + + P+++TYS LI GLC R EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD-PDIVTYSLLIYGLCMYSRLDEA 310
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
E+F MVSK PD +TY++LI+G+C+ KV+ K+ M G N YT L+
Sbjct: 311 EEMFGFMVSKG-CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
G+C+ GKL A+E+F M + P+ I Y L++ C G++++AL +L +M++ G A
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
DIVT+NII+ G+C+ G++ +A + L G+ + +Y ++ +KG +A L
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 438 RLMLCRGFLPH 448
R M G LP+
Sbjct: 490 RKMKEDGILPN 500
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 175/343 (51%), Gaps = 17/343 (4%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
AL +F+ + G+ N Y TI+D L + K+ + +L +M +GI +++
Sbjct: 170 ALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME------KDGIGPDVV 222
Query: 138 KH---FSNCSLHERVLEMFHKIHPITREK--PSLKAISTCLNLLIESNQVDLAQNFLKYS 192
+ S R + + +T+ + P + + ++ ++ +V A+ F Y
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF--YE 280
Query: 193 NQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
R L P+ +++LI C L+ A E+ M S+ +P+++TYS LI+G CK+
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV-SKGCFPDVVTYSILINGYCKS 339
Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
+ ++LF EM S+ ++ + +TY +LI G+CR GK++ A++I M G +PN+
Sbjct: 340 KKVEHGMKLFCEM-SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
Y L++G C GK+++A + +M+ + D + Y +I C+AG V +A ++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNK 414
+G DI T+ ++ GL ++G EA + K+ DGI N+
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 136/275 (49%), Gaps = 1/275 (0%)
Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
NL T + L++ C+ + A+ +M+ P +T+ L++GFCRG +V A +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
+ M G PNV Y T+++G CK ++ A ++ + M+ + PD + Y +LI+ C
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
+GR +A ++ M +R D+ TFN ++ +EG++ EA E++ + + +
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
Y +++ C L++A E+ M+ +G P T + L+ CK+ E +
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ G + ++ +L++ CR KL A E+ +V
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 1/283 (0%)
Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
S+ +Y N Y ++ + + ++++LF MV + + LP ++ L+ + K
Sbjct: 39 SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMV-QCRPLPSIADFSRLLSAISKMKKY 97
Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
D + E M+ G N+ L+N FC+ +L A +M +P + + +L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
+N FCR RV +AL + +M G K ++V +N I+ GLC+ +++ AL +L ++ DGI
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 411 YLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAI 470
+ +Y +++ C G A ++ M R P T N L+ K G +A
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 471 ALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
++ P+ +++LL+ +C +L A E+ +V K
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 225/459 (49%), Gaps = 21/459 (4%)
Query: 68 LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM------ 121
L++ +++P+ A + F + GF H+ +Y + L + + ++VL++M
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD 174
Query: 122 ---------TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
T C G+F L + + E ++ F K+ R P ++ +
Sbjct: 175 CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRF-RVFPKTRSCNGL 233
Query: 173 LNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQ 232
L+ + + D + F K +P +NI+I CK G +E+A + +EMK
Sbjct: 234 LHRFAKLGKTDDVKRFFK-DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 233 MSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL-PDALTYNVLIDGFCRGGKVD 291
+ P+ +TY+++IDG K GR + + FEEM KD PD +TYN LI+ FC+ GK+
Sbjct: 293 L-VPDTVTYNSMIDGFGKVGRLDDTVCFFEEM--KDMCCEPDVITYNALINCFCKFGKLP 349
Query: 292 RAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI 351
+ MK NG PNV +Y+TL++ FCKEG +Q+A + + +M+ L P+ YT+LI
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 352 NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIY 411
+ C+ G + +A L EM + G + ++VT+ ++ GLC +++EA + K+ G+
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
Query: 412 LNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIA 471
N ASY +++ + +++A+ELL + RG P + LC E A +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 472 LFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
+ + E G K S + L++ + LLDE+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 224/462 (48%), Gaps = 6/462 (1%)
Query: 51 VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK 110
+ A R ++ I + E + + A +F + + +G + TY +++D + +
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 111 FEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAIS 170
+ +M C+ + L+ F LE + ++ KP++ + S
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG-NGLKPNVVSYS 371
Query: 171 TCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKK 230
T ++ + + A F + + L PN + LI +CK G L AF + EM +
Sbjct: 372 TLVDAFCKEGMMQQAIKFY-VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 231 SQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKV 290
+ + N++TY+ LIDGLC R +EA ELF +M + ++P+ +YN LI GF + +
Sbjct: 431 VGVEW-NVVTYTALIDGLCDAERMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNM 488
Query: 291 DRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTL 350
DRA +++ +K G P++ Y T + G C K++ AK V +EMK +K +++ YTTL
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD-G 409
++ + ++G E L LL EMKE + +VTF +++ GLC+ + +A+ ++ D G
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 410 IYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA 469
+ N A + +++ C+ ++E A L M+ +G +P L+ K G +A
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 470 IALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ E+G K + ++ LV + +L A L+E++
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 710
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 170/348 (48%), Gaps = 5/348 (1%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G N TY +++D + + +M +++ + L+ + +
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
E+F K+ P+L + + ++ +++ +D A L + +KP+ ++ I
Sbjct: 457 EELFGKMDT-AGVIPNLASYNALIHGFVKAKNMDRALELLN-ELKGRGIKPDLLLYGTFI 514
Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
C +E+A V+ EMK+ + +LI Y+TL+D K+G E + L +EM D
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLI-YTTLMDAYFKSGNPTEGLHLLDEMKELD- 572
Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEA 328
I +T+ VLIDG C+ V +A + N+ G N +T +++G CK+ +++ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
+F++M L PD YT+L++ + G V EAL L +M E G K D++ + ++ G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
L ++++A LE++ +GI+ ++ VL + G +++A+EL
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 144/312 (46%), Gaps = 3/312 (0%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
Q G N TY ++D L ++ + + + +M + + L+ F +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
R LE+ +++ KP L T + L +++ A+ + + +K N+ I+
Sbjct: 490 RALELLNELKG-RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN-EMKECGIKANSLIYTT 547
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
L+ + K G +L EMK+ + ++T+ LIDGLCKN +A++ F + +
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEV-TVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
+ +A + +IDG C+ +V+ A + E M G P+ YT+LM+G K+G + E
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
A + D+M +K D + YT+L+ ++ +A L+EM G D V +L
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
Query: 388 GLCREGKIEEAL 399
G I+EA+
Sbjct: 727 KHYELGCIDEAV 738
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 217/428 (50%), Gaps = 14/428 (3%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
+ G+ + T+ T++ L + K A++ QM C+ + ++ +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIES----NQVDLAQN-FLKYSNQHLRLKPNT 202
L + K+ EK ++A N +I+ +D A N F + N+ +R P+
Sbjct: 241 LALSLLKKM-----EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR--PDV 293
Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
++ LI C G A +L +M + +++ PN++T+S LID K G+ EA +L++
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
EM+ K I PD TY+ LI+GFC ++D AK + E M + C PNV Y+TL+ GFCK
Sbjct: 353 EMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
+++E E+F EM L +T+ YTTLI+ F +A D A + K+M G +I+T+
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
NI+L GLC+ GK+ +A+ + E L + + +Y I++ C+ G++E EL +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
+G P+ N ++ C+ G E+A L + E G P S ++ L+ R
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 503 AFELLDEL 510
+ EL+ E+
Sbjct: 592 SAELIKEM 599
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 222/445 (49%), Gaps = 21/445 (4%)
Query: 79 LEIFNTVSEQK---GFNHNNATYATILDKLARYKKFEAVDAVLRQMT---YETCKFHEGI 132
E+ ++ EQ G +H+ TY+ ++ R + AVL +M YE
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 133 FLNLMKHFSNCS----LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
LN H S L ++++EM +K P +T ++ L N+ A
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYK--------PDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
+ Q +P+ + ++ CKRG ++ A +LK+M+K ++ +++ Y+T+IDGL
Sbjct: 211 VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYNTIIDGL 268
Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPN 308
CK +A+ LF EM +K I PD TY+ LI C G+ A +++ M NPN
Sbjct: 269 CKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 309 VFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLK 368
V ++ L++ F KEGKL EA++++DEM + PD Y++LIN FC R+DEA + +
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 369 EMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKG 428
M + C ++VT++ ++ G C+ ++EE + + ++ G+ N +Y +++ Q
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 429 ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWA 488
+ + A + + M+ G P+ T N LL LCK G A + L +P+ ++
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 489 LLVELICRGRKLLFAFELLDELVIK 513
+++E +C+ K+ +EL L +K
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLK 532
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 205/411 (49%), Gaps = 4/411 (0%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
Q+G + TY T+++ L + + ++L++M + I+ ++ +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
L +F ++ +P + S+ ++ L + A L + ++ PN F+
Sbjct: 276 DALNLFTEMDN-KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSA 333
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
LI K G L A ++ EM K + P++ TYS+LI+G C + R EA +FE M+SK
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
D P+ +TY+ LI GFC+ +V+ ++ M G N YTTL++GF +
Sbjct: 393 D-CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
A+ VF +M + + P+ + Y L++ C+ G++ +A+ + + ++ + DI T+NI++
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
G+C+ GK+E+ + L G+ N +Y +++ C+KG E+A LL+ M G LP
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
+ T N L+ + G E +A + + GF ++ + L+ ++ GR
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 159/294 (54%), Gaps = 2/294 (0%)
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
++ A ++ +M KS+ +P+++ ++ L+ + K +F I L E+M + I D TY
Sbjct: 64 VDDAVDLFGDMVKSR-PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL-GISHDLYTY 121
Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
++ I+ FCR ++ A ++ M G P++ ++L+NG+C ++ +A + D+M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
KPDT +TTLI+ + EA+ L+ +M +RGC+ D+VT+ ++ GLC+ G I+
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
AL +L+K+ I + Y +++ C+ ++ A+ L M +G P T + L+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
LC G DA+ L ++E P +++ L++ + KL+ A +L DE++
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 167/335 (49%), Gaps = 7/335 (2%)
Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
+ VDL + +K R P+ FN L+ K E + ++M+ +S+ +L
Sbjct: 66 DAVDLFGDMVKS-----RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLY 119
Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
TYS I+ C+ + A+ + +M+ K PD +T + L++G+C ++ A +++
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
M G P+ F +TTL++G K EA + D+M +PD + Y T++N C+ G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
+D AL LLK+M++ +AD+V +N I+ GLC+ +++AL + ++ GI + +Y
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
+++ C G A LL M+ R P+ T + L+ K G +A +++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
P+ +++ L+ C +L A + + ++ K+
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 193/399 (48%), Gaps = 43/399 (10%)
Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
RV+E+ K +P + A + +N + N++D A L P+T +NI
Sbjct: 145 RVMEILEKFG-----QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNI 198
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
+I C RG L+ A +VL ++ S P +ITY+ LI+ G EA++L +EM+S+
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRA---------------------------------- 293
+ PD TYN +I G C+ G VDRA
Sbjct: 258 G-LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 294 -KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLIN 352
+K+M M + C+PNV Y+ L+ C++GK++EA + MK L PD Y LI
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 353 CFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYL 412
FCR GR+D A+E L+ M GC DIV +N +L LC+ GK ++AL + KL G
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 413 NKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIAL 472
N +SY + + G+ +A+ ++ M+ G P T N ++ LC+ GM ++A L
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 473 FGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ F P ++ +++ C+ ++ A +L+ +V
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 176/316 (55%), Gaps = 6/316 (1%)
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLK--EMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
LKP+ +N +I+ CK G ++ AFE+++ E+K + P++I+Y+ L+ L G++
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE---PDVISYNILLRALLNQGKWE 315
Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
E +L +M S ++ P+ +TY++LI CR GK++ A +++ MK G P+ ++Y L
Sbjct: 316 EGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
+ FC+EG+L A E + M + PD + Y T++ C+ G+ D+ALE+ ++ E GC
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
+ ++N + L G AL M+ ++ +GI ++ +Y +++ C++G +++A E
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
LL M F P T N +L+ CKA EDA L +V G +P ++ +L+E I
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 496 RGRKLLFAFELLDELV 511
A EL ++LV
Sbjct: 555 FAGYRAEAMELANDLV 570
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 174/348 (50%), Gaps = 40/348 (11%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ + LIK + A V++ ++K P++ Y+ LI+G CK R +A
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEK--FGQPDVFAYNALINGFCKMNRIDDATR 179
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
+ + M SKD PD +TYN++I C GK+D A K++ + ++ C P V YT L+
Sbjct: 180 VLDRMRSKD-FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
EG + EA ++ DEM + LKPD Y T+I C+ G VD A E+++ ++ +GC+ D+
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 380 VTFNIILGG-----------------------------------LCREGKIEEALGMLEK 404
+++NI+L LCR+GKIEEA+ +L+
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
+ G+ + SY ++ C++G L+ AIE L M+ G LP N +L LCK G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 465 AEDAAIALFG-LVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
A D A+ +FG L E+G P S S+ + + + A ++ E++
Sbjct: 419 A-DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 3/304 (0%)
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
+ C+ G + +L+ M + + P++I + LI G +A+ + E +
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYN-PDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
Q PD YN LI+GFC+ ++D A ++++ M++ +P+ Y ++ C GKL
Sbjct: 154 GQ--PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
A +V +++ + +P I YT LI G VDEAL+L+ EM RG K D+ T+N I+
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
G+C+EG ++ A M+ L G + SY I+L +G+ E+ +L+ M P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 448 HYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELL 507
+ T + L+ LC+ G E+A L + E G P++ S+ L+ CR +L A E L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 508 DELV 511
+ ++
Sbjct: 392 ETMI 395
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
C+ G E+ + + M PD I T LI F + +A+ ++ E+ E+ + D+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
+N ++ G C+ +I++A +L+++ + +Y I++ C +G+L+ A+++L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
+L P T L+ G ++A + ++ G KP+ ++ ++ +C+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 500 LLFAFELLDELVIK 513
+ AFE++ L +K
Sbjct: 279 VDRAFEMVRNLELK 292
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ +NI++ CK +E A VL+ M + PN TY+ LI+G+ G EA+E
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR-PNETTYTVLIEGIGFAGYRAEAME 564
Query: 260 LFEEMVSKDQI 270
L ++V D I
Sbjct: 565 LANDLVRIDAI 575
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 200/366 (54%), Gaps = 5/366 (1%)
Query: 68 LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCK 127
LI + +P A EIF+ S+Q F H+ +++ ++ KL R + F +D VL +
Sbjct: 57 LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116
Query: 128 FHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQN 187
IF L+K ++ L E+VL F+K+ P K ++ L++L+ S++ L +
Sbjct: 117 LTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNF-TPQPKHLNRILDVLV-SHRGYLQKA 174
Query: 188 FLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLID 246
F + + L + PNT +N+L++ C L A+++ +M + + P++ +Y LI
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV-VPDVDSYKILIQ 233
Query: 247 GLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN 306
G C+ G+ A+EL ++M++K +PD L+Y L++ CR ++ A K++ MK GCN
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKG-FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALEL 366
P++ +Y T++ GFC+E + +A++V D+M + P+++ Y TLI C G DE +
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 367 LKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQ 426
L+EM +G N ++ G C GK+EEA ++E + +G L+ ++ +V+ C
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412
Query: 427 KGELEK 432
+ E EK
Sbjct: 413 EDESEK 418
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 35/243 (14%)
Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
G + +A ++ + + +G PN +Y LM FC L A ++F +M + PD Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 348 TTLINCFCRAGRVDEALELLKE-----------------------------------MKE 372
LI FCR G+V+ A+ELL + MK
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
+GC D+V +N ++ G CRE + +A +L+ + +G N SYR ++ C +G ++
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
+ L M+ +GF PH++ SN L+ C G E+A + +++ G SD+W +++
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408
Query: 493 LIC 495
LIC
Sbjct: 409 LIC 411
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTCIFNILIKHHCKRGTLES 220
P + +T LN L Q+ A L ++LK P+ +N +I C+
Sbjct: 258 PDRLSYTTLLNSLCRKTQLREAYKLL----CRMKLKGCNPDLVHYNTMILGFCREDRAMD 313
Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
A +VL +M + S PN ++Y TLI GLC G F E + EEM+SK P N L
Sbjct: 314 ARKVLDDMLSNGCS-PNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG-FSPHFSVSNCL 371
Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
+ GFC GKV+ A ++E + NG + + ++ C E + ++ K ++ +
Sbjct: 372 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDA----V 427
Query: 341 KPDTIGYTTLIN 352
K + G T +++
Sbjct: 428 KEEITGDTRIVD 439
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 187/355 (52%), Gaps = 4/355 (1%)
Query: 133 FLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYS 192
F +L+ + + + E + +F +I + KP++ +T + L ++ ++ A
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 193 NQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNG 252
+ +PN +N L+ C+ G A +L++M K ++ PN+IT++ LID K G
Sbjct: 215 GTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE-PNVITFTALIDAFVKVG 272
Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
+ EA EL+ M+ + PD TY LI+G C G +D A+++ M+ NGC PN Y
Sbjct: 273 KLMEAKELYNVMIQM-SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
TTL++GFCK ++++ ++F EM + +TI YT LI +C GR D A E+ +M
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
R DI T+N++L GLC GK+E+AL + E + + +N +Y I++ C+ G++E
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSW 487
A +L + +G P+ T ++ C+ G+ +A + E GF P +
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 179/336 (53%), Gaps = 7/336 (2%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRL--KPNTCIFNILIKHHCKRGTLES 220
+P L ++ LN N+++ A + +Q L + KPN + LI+ CK L
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDA---IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
A E+ +M + S PN++TY+ L+ GLC+ GR+ +A L +M+ K +I P+ +T+ L
Sbjct: 207 AVELFNQMGTNG-SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM-KRRIEPNVITFTAL 264
Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
ID F + GK+ AK++ M P+VF Y +L+NG C G L EA+++F M+
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
P+ + YTTLI+ FC++ RV++ +++ EM ++G A+ +T+ +++ G C G+ + A
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
+ ++ + +Y ++L+ C G++EKA+ + M R + T ++ +C
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
K G EDA L G KP ++ ++ CR
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 143/258 (55%), Gaps = 3/258 (1%)
Query: 161 REKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLES 220
R +P++ + ++ ++ ++ A+ Q + + P+ + LI C G L+
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ-MSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
A ++ M+++ YPN + Y+TLI G CK+ R + +++F EM S+ ++ + +TY VL
Sbjct: 312 ARQMFYLMERNG-CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM-SQKGVVANTITYTVL 369
Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
I G+C G+ D A+++ M + P++ Y L++G C GK+++A +F+ M+ +
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
+ + YT +I C+ G+V++A +L + +G K +++T+ ++ G CR G I EA
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 401 MLEKLWYDGIYLNKASYR 418
+ +K+ DG N++ Y+
Sbjct: 490 LFKKMKEDGFLPNESVYK 507
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 184/404 (45%), Gaps = 49/404 (12%)
Query: 150 LEMFHK-IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
L++F + +H +R PS+ + L+++ + N+ D+ + + Q L + P C NI+
Sbjct: 68 LDLFTRMVH--SRPLPSIIDFTRLLSVIAKMNRYDVVISLFE-QMQILGIPPLLCTCNIV 124
Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
+ C A L +M K P+L+T+++L++G C R +AI LF++++
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFE-PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC-------- 320
P+ +TY LI C+ ++ A ++ M NG PNV Y L+ G C
Sbjct: 184 -FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 321 ---------------------------KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
K GKL EAKE+++ M + PD Y +LIN
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
C G +DEA ++ M+ GC + V + ++ G C+ ++E+ + + ++ G+ N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
+Y +++ C G + A E+ M R P T N LL LC G E A +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM--- 419
Query: 474 GLVEMGFKPESD----SWALLVELICRGRKLLFAFELLDELVIK 513
+ E K E D ++ ++++ +C+ K+ AF+L L K
Sbjct: 420 -IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 35/223 (15%)
Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG--------- 374
+ +A ++F M + P I +T L++ + R D + L ++M+ G
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 375 ------------CKA--------------DIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
C+A D+VTF +L G C +IE+A+ + +++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
G N +Y ++ C+ L A+EL M G P+ T N L+ LC+ G DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
A L +++ +P ++ L++ + KL+ A EL + ++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 228/433 (52%), Gaps = 16/433 (3%)
Query: 96 ATYATILDKLA-RYKKFEAVDAVLRQMTY--ETCKFHEGIFLNLMKHFSNCSLHERVLEM 152
T +T+++ L + + EA+ + R + Y + + G LN + N +L L++
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL---ALDL 232
Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKH 211
F K+ K S+ S ++ L + D A + ++ ++ +K + ++ LI
Sbjct: 233 FRKMEE-RNIKASVVQYSIVIDSLCKDGSFDDALSL--FNEMEMKGIKADVVTYSSLIGG 289
Query: 212 HCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQIL 271
C G + ++L+EM + P+++T+S LID K G+ EA EL+ EM+++ I
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIA 347
Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
PD +TYN LIDGFC+ + A ++ + M + GC P++ Y+ L+N +CK ++ + +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
F E+ + L P+TI Y TL+ FC++G+++ A EL +EM RG +VT+ I+L GLC
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
G++ +AL + EK+ + L Y I+++ C +++ A L + +G P T
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
N ++ LCK G +A + + E G P+ ++ +L+ G L+ + EL++E+
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 512 I----KESGTIQV 520
+ +S TI++
Sbjct: 588 VCGFSADSSTIKM 600
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 175/333 (52%), Gaps = 5/333 (1%)
Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY-PN 237
+ Q DL F K + ++ + I+I +C++ L AF VL K + Y P+
Sbjct: 83 TKQYDLVLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK--LGYEPD 139
Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
IT+STL++G C GR EA+ L + MV Q PD +T + LI+G C G+V A ++
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRA 357
+ M G P+ Y ++N CK G A ++F +M+ +K + Y+ +I+ C+
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 358 GRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASY 417
G D+AL L EM+ +G KAD+VT++ ++GGLC +GK ++ ML ++ I + ++
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 418 RIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE 477
+++ ++G+L +A EL M+ RG P T N L+ CK +A +V
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
G +P+ ++++L+ C+ +++ L E+
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 2/316 (0%)
Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
L +P+T F+ L+ C G + A ++ M + + P+L+T STLI+GLC GR
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR-PDLVTVSTLINGLCLKGRVS 192
Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
EA+ L + MV PD +TY +++ C+ G A + M+ +V Y+ +
Sbjct: 193 EALVLIDRMVEY-GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
++ CK+G +A +F+EM+ +K D + Y++LI C G+ D+ ++L+EM R
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
D+VTF+ ++ +EGK+ EA + ++ GI + +Y +++ C++ L +A +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
+ LM+ +G P T + L+ CKA +D + G P + ++ LV C
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 496 RGRKLLFAFELLDELV 511
+ KL A EL E+V
Sbjct: 432 QSGKLNAAKELFQEMV 447
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 179/352 (50%), Gaps = 17/352 (4%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
AL +FN + E KG + TY++++ L K++ +LR+M F L+
Sbjct: 264 ALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
F E+++++ ITR + + N LI+ +N L +NQ
Sbjct: 323 DVFVKEGKLLEAKELYNEM--ITR---GIAPDTITYNSLIDGF---CKENCLHEANQMFD 374
Query: 198 L------KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKN 251
L +P+ ++ILI +CK ++ + +E+ S+ PN ITY+TL+ G C++
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS-SKGLIPNTITYNTLVLGFCQS 433
Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
G+ A ELF+EMVS+ + P +TY +L+DG C G++++A +I E M+ + +
Sbjct: 434 GKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMK 371
Y +++G C K+ +A +F + + +KPD + Y +I C+ G + EA L ++MK
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 372 ERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
E GC D T+NI++ + ++ ++E++ G + ++ ++V++
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 132/242 (54%)
Query: 272 PDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEV 331
PD +T++ L++GFC G+V A +++ M P++ +TL+NG C +G++ EA +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 332 FDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCR 391
D M + +PD + Y ++N C++G AL+L ++M+ER KA +V ++I++ LC+
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
+G ++AL + ++ GI + +Y ++ C G+ + ++LR M+ R +P T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ L+ K G +A ++ G P++ ++ L++ C+ L A ++ D +V
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 512 IK 513
K
Sbjct: 378 SK 379
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)
Query: 253 RFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNY 312
+ +AI+LFE M+ + + LP + +N L R + D + M+ NG +++
Sbjct: 50 KVNDAIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
T ++N +C++ KL A V +PDTI ++TL+N FC GRV EA+ L+ M E
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
+ D+VT + ++ GLC +G++ EAL +++++ G ++ +Y VLN C+ G
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM-GFKPESDSWALLV 491
A++L R M R + ++ LCK G +D A++LF +EM G K + +++ L+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD-ALSLFNEMEMKGIKADVVTYSSLI 287
Query: 492 ELICRGRKLLFAFELLDELV 511
+C K ++L E++
Sbjct: 288 GGLCNDGKWDDGAKMLREMI 307
>sp|Q9MAG8|PPR79_ARATH Putative pentatricopeptide repeat-containing protein At1g53330
OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1
Length = 471
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 235/459 (51%), Gaps = 12/459 (2%)
Query: 67 SLIKCEKEPQCALEIFN-----TVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM 121
SL++ E +P A+++F + + ++ F ++ Y I+ KL K F+ +D VL +
Sbjct: 14 SLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHL 73
Query: 122 TYET-CKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESN 180
+T E IF N++ F L R L MF ++ P R + ++K++++ L+ L++
Sbjct: 74 KTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEM-PQYRCQRTVKSLNSLLSALLKCG 132
Query: 181 QVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLIT 240
+++ + L ++ KP+ C +NILI + G + A ++ EM K ++ P +T
Sbjct: 133 ELEKMKERLSSIDEFG--KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVK-PTGVT 189
Query: 241 YSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM 300
+ TLI GLCK+ R +EA+++ +M+ + P Y LI C+ G++ A K+ +
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 301 KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRV 360
+ Y+TL++ K G+ E + +EM KPDT+ Y LIN FC
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIV 420
+ A +L EM E+G K D++++N+ILG R K EEA + E + G + SYRIV
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 421 LNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
+ C+ + E+A +L ML +G+ P L +LC++G E + + L G
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGI 428
Query: 481 KPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQ 519
++D W++++ +C+ + + +LL V KE G +
Sbjct: 429 AGDADVWSVMIPTMCKEPVISDSIDLLLNTV-KEDGPLS 466
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 167/288 (57%), Gaps = 2/288 (0%)
Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
+N LIK +CK G A + EM + ++ P++ITY++LI +CK G A+E ++M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
+ + P+ TY L+DGF + G ++ A +++ M +NG +P+V Y L+NG C GK
Sbjct: 372 RVRG-LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
+++A V ++MK L PD + Y+T+++ FCR+ VDEAL + +EM E+G K D +T++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
++ G C + + +EA + E++ G+ ++ +Y ++N C +G+LEKA++L M+ +G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
LP T + L+ L K +A L L P ++ L+E
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 217/428 (50%), Gaps = 34/428 (7%)
Query: 89 KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
KG N +Y +++ L R + + V VL +M E + L+K + +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 149 VLEMFHKI--HPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK---PNTC 203
L M ++ H +T PS+ ++ ++ + ++ ++ A FL +R++ PN
Sbjct: 329 ALVMHAEMLRHGLT---PSVITYTSLIHSMCKAGNMNRAMEFL----DQMRVRGLCPNER 381
Query: 204 IFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEE 263
+ L+ ++G + A+ VL+EM + S P+++TY+ LI+G C G+ +AI + E+
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFS-PSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 264 MVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEG 323
M K + PD ++Y+ ++ GFCR VD A ++ M G P+ Y++L+ GFC++
Sbjct: 441 MKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFN 383
+ +EA ++++EM L PD YT LIN +C G +++AL+L EM E+G D+VT++
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 384 IILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCR 443
+++ GL ++ + EA +L KL+Y+ + +Y ++ +C E + + L++
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE-NCSNIEFKSVVSLIK----- 613
Query: 444 GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFA 503
GF C GM +A ++ KP+ ++ +++ CR + A
Sbjct: 614 GF--------------CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 504 FELLDELV 511
+ L E+V
Sbjct: 660 YTLYKEMV 667
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 211/431 (48%), Gaps = 42/431 (9%)
Query: 120 QMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFH--KIHPITREKPSLKAISTCLNLLI 177
Q TY+ C +F ++K +S SL ++ L + H + H P + + + L+ I
Sbjct: 124 QETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFM---PGVLSYNAVLDATI 180
Query: 178 ESNQ-VDLAQNFLK-----------------------YSNQHLRLK-----------PNT 202
S + + A+N K N + L PN
Sbjct: 181 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240
Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
+N LI +CK ++ F++L+ M + PNLI+Y+ +I+GLC+ GR +E +
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE-PNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
EM + L D +TYN LI G+C+ G +A + M +G P+V YT+L++ CK
Sbjct: 300 EMNRRGYSL-DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
G + A E D+M+ L P+ YTTL++ F + G ++EA +L+EM + G +VT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
N ++ G C GK+E+A+ +LE + G+ + SY VL+ C+ ++++A+ + R M+
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLF 502
+G P T + L+ C+ ++A ++ +G P+ ++ L+ C L
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 503 AFELLDELVIK 513
A +L +E+V K
Sbjct: 539 ALQLHNEMVEK 549
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 171/318 (53%), Gaps = 2/318 (0%)
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
L+PN +N++I C+ G ++ VL EM + S +TY+TLI G CK G F +A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE-VTYNTLIKGYCKEGNFHQA 329
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+ + EM+ + + P +TY LI C+ G ++RA + ++ M+ G PN YTTL++
Sbjct: 330 LVMHAEML-RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
GF ++G + EA V EM + P + Y LIN C G++++A+ +L++MKE+G
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
D+V+++ +L G CR ++EAL + ++ GI + +Y ++ C++ ++A +L
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
ML G P T L+ C G E A +VE G P+ ++++L+ + +
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 498 RKLLFAFELLDELVIKES 515
+ A LL +L +ES
Sbjct: 569 SRTREAKRLLLKLFYEES 586
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 169/316 (53%), Gaps = 5/316 (1%)
Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR-FREAIEL 260
+ +F++++K + + ++ A ++ + ++ P +++Y+ ++D ++ R A +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
F+EM+ + Q+ P+ TYN+LI GFC G +D A + + M+ GC PNV Y TL++G+C
Sbjct: 193 FKEML-ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
K K+ + ++ M L+P+ I Y +IN CR GR+ E +L EM RG D V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 381 TFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLM 440
T+N ++ G C+EG +AL M ++ G+ + +Y +++ C+ G + +A+E L M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 441 LCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKL 500
RG P+ T L+ + G +A L + + GF P ++ L+ C K+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 501 LFAFELLDELVIKESG 516
A +L+++ KE G
Sbjct: 432 EDAIAVLEDM--KEKG 445
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 218/456 (47%), Gaps = 42/456 (9%)
Query: 60 ISHGAAISLIK----CEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVD 115
++H ++LIK CEKE + F+ + E GF N Y+++L LA+
Sbjct: 121 VAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDL----- 175
Query: 116 AVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNL 175
L +TY + +G + ++ + T +N
Sbjct: 176 GFLAYVTYRRME-ADGFVVGMIDY------------------------------RTIVNA 204
Query: 176 LIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSY 235
L ++ + A+ F+ + ++ I L+ C+ L A +V M K
Sbjct: 205 LCKNGYTEAAEMFMS-KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCA 263
Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
PN ++YS LI GLC+ GR EA L ++M K P TY VLI C G +D+A
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
+ + M GC PNV YT L++G C++GK++EA V +M + P I Y LIN +C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 356 RAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKA 415
+ GRV A ELL M++R CK ++ TFN ++ GLCR GK +A+ +L+++ +G+ +
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 416 SYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
SY ++++ C++G + A +LL M C P T ++ CK G A+ A+ L +
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 476 VEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ G + + L++ +C+ K A +L+ LV
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 219/434 (50%), Gaps = 4/434 (0%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
AL++F+ +S++ N+ +Y+ ++ L + E + QM + C+ + L+
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
K + L ++ +F ++ P KP++ + ++ L +++ A + + R
Sbjct: 309 KALCDRGLIDKAFNLFDEMIP-RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD-R 366
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
+ P+ +N LI +CK G + AFE+L M+K + PN+ T++ L++GLC+ G+ +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEK-RACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+ L + M+ + + PD ++YNVLIDG CR G ++ A K++ M P+ +T ++N
Sbjct: 426 VHLLKRMLD-NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
FCK+GK A M + D + TTLI+ C+ G+ +AL +L+ + +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
+ N+IL L + K++E L ML K+ G+ + +Y +++ + G++ + +L
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
LM G LP+ ++ LC+ G E+A L + + G P ++ ++V+
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 498 RKLLFAFELLDELV 511
KL A E + +V
Sbjct: 665 GKLDRALETVRAMV 678
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 214/516 (41%), Gaps = 138/516 (26%)
Query: 82 FNTVSEQ--KGFNHNNATYATILDKLARYKKFEAVDAVLRQM----------TY------ 123
FN E +G N TY ++D L R K E + V R+M TY
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 124 -------------------ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITRE-- 162
CK + F LM+ RV + + +H + R
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC------RVGKPYKAVHLLKRMLD 434
Query: 163 ---KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
P + + + ++ L ++ A L N ++P+ F +I CK+G +
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN-CFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV-------------- 265
A L M + +S +T +TLIDG+CK G+ R+A+ + E +V
Sbjct: 494 VASAFLGLMLRKGISLDE-VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 266 --------------------SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGC 305
+K ++P +TY L+DG R G + + +I+E MK +GC
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 306 NPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALE 365
PNV+ YT ++NG C+ G+++EA+++ M++ + P+ + YT ++ + G++D ALE
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 366 LLKEMKERG-----------------------------------------CKADIVTFNI 384
++ M ERG C ++++
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 385 ILGG------------LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
LGG LC+EG+ +E+ +++ + G++L KA I++ C K + K
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKA-MDIIMESYCSKKKHTK 791
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
+EL+ L+L GF+P + + ++ L K G AE A
Sbjct: 792 CMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 175/315 (55%), Gaps = 2/315 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
PN I+ LI CK+G +E A ++ EM K + N TY+ LI+GL KNG ++ E
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL-VANERTYTVLINGLFKNGVKKQGFE 254
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
++E+M +D + P+ TYN +++ C+ G+ A ++ + M+ G + N+ Y TL+ G
Sbjct: 255 MYEKM-QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
C+E KL EA +V D+MK+ + P+ I Y TLI+ FC G++ +AL L +++K RG +
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
VT+NI++ G CR+G A M++++ GI +K +Y I+++ + +EKAI+L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
M G +P T + L+ C G +A+ +VE +P + ++ C+
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 500 LLFAFELLDELVIKE 514
A +LL E+ KE
Sbjct: 494 SYRALKLLKEMEEKE 508
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 197/348 (56%), Gaps = 3/348 (0%)
Query: 164 PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFE 223
P++ +T ++ + +++ A++ + L L N + +LI K G + FE
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLF-FEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
+ ++M++ + +PNL TY+ +++ LCK+GR ++A ++F+EM + + + +TYN LI G
Sbjct: 255 MYEKMQEDGV-FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG-VSCNIVTYNTLIGG 312
Query: 284 FCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPD 343
CR K++ A K+++ MK++G NPN+ Y TL++GFC GKL +A + ++K+ L P
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 344 TIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLE 403
+ Y L++ FCR G A +++KEM+ERG K VT+ I++ R +E+A+ +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 404 KLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAG 463
+ G+ + +Y ++++ C KG++ +A L + M+ + P+ N +++ CK G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 464 MAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ A L + E P S+ ++E++C+ RK A L+++++
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 169/291 (58%), Gaps = 2/291 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
PN +N ++ CK G + AF+V EM++ +S N++TY+TLI GLC+ + EA +
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS-CNIVTYNTLIGGLCREMKLNEANK 324
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
+ ++M S D I P+ +TYN LIDGFC GK+ +A + +K+ G +P++ Y L++GF
Sbjct: 325 VVDQMKS-DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
C++G A ++ EM+ +KP + YT LI+ F R+ +++A++L M+E G D+
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
T+++++ G C +G++ EA + + + N+ Y ++ C++G +A++LL+
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
M + P+ A+ ++ LCK +++A + +++ G P + +L+
Sbjct: 504 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 179/374 (47%), Gaps = 40/374 (10%)
Query: 180 NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
+Q + + L Y + K ++ ++I + + +L + EM + P
Sbjct: 72 SQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGF-VPGSN 130
Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
++ L+ + + F + F E +K +++ D ++ +LI G C G+++++ ++
Sbjct: 131 CFNYLLTFVVGSSSFNQWWSFFNE--NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIE 188
Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC------ 353
+ G +PNV YTTL++G CK+G++++AK++F EM L + YT LIN
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 354 -----------------------------FCRAGRVDEALELLKEMKERGCKADIVTFNI 384
C+ GR +A ++ EM+ERG +IVT+N
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
++GGLCRE K+ EA +++++ DGI N +Y +++ C G+L KA+ L R + RG
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 445 FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF 504
P T N L+ C+ G AA + + E G KP ++ +L++ R + A
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 505 ELLDELVIKESGTI 518
+L L ++E G +
Sbjct: 429 QL--RLSMEELGLV 440
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 210/421 (49%), Gaps = 4/421 (0%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G+ + T+ T++ L K ++ +M C+ + +++
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
L++ K+ K + ST ++ L +D A + K +K + +N L+
Sbjct: 213 LDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLV 270
Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
+ CK G +LK+M ++ PN+IT++ L+D K G+ +EA EL++EM+++
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITR-G 328
Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
I P+ +TYN L+DG+C ++ A +++ M N C+P++ +T+L+ G+C ++ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
+VF + L + + Y+ L+ FC++G++ A EL +EM G D++T+ I+L GL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
C GK+E+AL + E L + L Y ++ C+ G++E A L + C+G P+
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDE 509
T ++ LCK G +A I L + E G P ++ L+ R L + +L++E
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 510 L 510
+
Sbjct: 569 M 569
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 165/298 (55%), Gaps = 2/298 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
PN FN+L+ K G L+ A E+ KEM +S PN+ITY+TL+DG C R EA
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANN 354
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
+ + MV +++ PD +T+ LI G+C +VD K+ + G N Y+ L+ GF
Sbjct: 355 MLDLMV-RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
C+ GK++ A+E+F EM + + PD + Y L++ C G++++ALE+ +++++ I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
V + I+ G+C+ GK+E+A + L G+ N +Y ++++ C+KG L +A LLR
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
M G P+ T N L+ + G +A + + GF ++ S ++++++ G
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 179/353 (50%), Gaps = 5/353 (1%)
Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
+R PSL S + + + Q +L +F K + + N NI+I C+
Sbjct: 82 SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTC 140
Query: 220 SAFEVLKEMKKSQMSY-PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYN 278
A+ VL ++ K + Y P+ T++TLI GL G+ EA+ L + MV ++ PD +TYN
Sbjct: 141 FAYSVLGKVMK--LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV-ENGCQPDVVTYN 197
Query: 279 VLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNF 338
+++G CR G A ++ M+ +VF Y+T+++ C++G + A +F EM+
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 339 LLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA 398
+K + Y +L+ C+AG+ ++ LLK+M R +++TFN++L +EGK++EA
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 399 LGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR 458
+ +++ GI N +Y +++ C + L +A +L LM+ P T L+
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 459 LCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
C +D + + G + ++++LV+ C+ K+ A EL E+V
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 1/258 (0%)
Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
+AI LF+EM+ + + LP + ++ R + + + ++ NG N++ +
Sbjct: 71 DAIALFQEMI-RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
+N FC+ K A V ++ +PDT + TLI G+V EA+ L+ M E GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
+ D+VT+N I+ G+CR G AL +L K+ + + +Y +++ C+ G ++ AI
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
L + M +G T N L+ LCKAG D A+ L +V P ++ +L+++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 496 RGRKLLFAFELLDELVIK 513
+ KL A EL E++ +
Sbjct: 310 KEGKLQEANELYKEMITR 327
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/556 (24%), Positives = 247/556 (44%), Gaps = 139/556 (25%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
AL F +++ F H T+ ++ KLA + ++V +L+QM + E +F++++
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 138 KHFSNCSLHERVLEMFHKI----------------------------HPITRE------K 163
+ L ER +EMF++I + + R+ +
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 164 PSLKAISTCLNLLIESNQVDLAQNFL-KYSNQHL-------------------------- 196
P++ + L L ++N+VD A+ L + SN+
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 197 --RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
R +P ++N LI CK + AFE+++EM + +S PN+I+YSTLI+ LC +G+
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS-PNVISYSTLINVLCNSGQI 297
Query: 255 R-----------------------------------EAIELFEEMVSKDQILPDALTYNV 279
+A++L+ +M+ + P+ + YN
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
L+ GFC G + +A + M+ GC+PN+ Y +L+NGF K G L A ++++M
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 340 LKPDTIGYTTLINCFCR-----------------------------------AGRVDEAL 364
P+ + YT ++ CR AGR+D A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 365 ELLKEMKERG-CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNF 423
++ ++M+++ C +IVT+N +L GL + +IEEA G+ +++ G+ + ++Y +L+
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 424 SCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG---F 480
SC G A++L+ M+ G P T N +++ CK G AE AA + LV G +
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA-QMLDLVSCGRRKW 596
Query: 481 KPESDSWALLVELICR 496
+P+ S+ ++ +CR
Sbjct: 597 RPDVISYTNVIWGLCR 612
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 211/472 (44%), Gaps = 69/472 (14%)
Query: 87 EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
++ GF N TY +L L + K + +L +M+ + C + ++ L
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 147 ERVLEMFHKIHPIT-----------------------RE------KPSLKAISTCLNLLI 177
+ E+ + P+ RE P++ + ST +N+L
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 178 ESNQVDLAQNFLK-----------YS---------------------NQHLR---LKPNT 202
S Q++LA +FL Y+ NQ +R L+PN
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV 352
Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
+N L++ C G + A V M++ S PN+ TY +LI+G K G A+ ++
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS-PNIRTYGSLINGFAKRGSLDGAVYIWN 411
Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
+M++ P+ + Y +++ CR K A+ ++E M C P+V + + G C
Sbjct: 412 KMLTSG-CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 323 GKLQEAKEVFDEM-KNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
G+L A++VF +M + P+ + Y L++ +A R++EA L +E+ RG + T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
+N +L G C G AL ++ K+ DG ++ + +++ C++G+ E+A ++L L+
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 442 C--RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLV 491
C R + P + ++ LC++ ED I L ++ G P +W++L+
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 178/392 (45%), Gaps = 48/392 (12%)
Query: 72 EKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131
E + + A E+ + E KG + N +Y+T+++ L + E + L QM C H
Sbjct: 259 EHDYKGAFELMREMVE-KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC--HPN 315
Query: 132 IFLNLMKHFSNCSLHERVLEMFHKIHPITRE---KPSLKAISTCLNLLIESNQVDLAQNF 188
I+ L C L + + + R +P++ A +T + + A +
Sbjct: 316 IY-TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374
Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGL 248
+ + + PN + LI KRG+L+ A + +M S PN++ Y+ +++ L
Sbjct: 375 FSHM-EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC-PNVVVYTNMVEAL 432
Query: 249 CKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFM-KNNGCNP 307
C++ +F+EA L E M SK+ P T+N I G C G++D A+K+ M + + C P
Sbjct: 433 CRHSKFKEAESLIEIM-SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Query: 308 NVFNYTTLMNGFCKEGKLQEA----KEVF-------DEMKNFLL---------------- 340
N+ Y L++G K +++EA +E+F N LL
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Query: 341 --------KPDTIGYTTLINCFCRAGRVDEALELLKEMK--ERGCKADIVTFNIILGGLC 390
PD I +I +C+ G+ + A ++L + R + D++++ ++ GLC
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611
Query: 391 REGKIEEALGMLEKLWYDGIYLNKASYRIVLN 422
R E+ + +LE++ GI + A++ +++N
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 147/317 (46%), Gaps = 25/317 (7%)
Query: 42 PPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATI 101
P V +T V F SHG + A+ +F+ + E+ G + N TY ++
Sbjct: 350 PNVVAYNTLVQG-----FCSHGNIVK----------AVSVFSHM-EEIGCSPNIRTYGSL 393
Query: 102 LDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR 161
++ A+ + + +M C + ++ N+++ H + E I +++
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR---HSKFKEAESLIEIMSK 450
Query: 162 EK--PSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
E PS+ + + L ++ ++D A+ + Q R PN +N L+ K +E
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIE 510
Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
A+ + +E+ + + + TY+TL+ G C G A++L +M+ D PD +T N+
Sbjct: 511 EAYGLTREIFMRGVEWSS-STYNTLLHGSCNAGLPGIALQLVGKMMV-DGKSPDEITMNM 568
Query: 280 LIDGFCRGGKVDRAKKIMEFMK--NNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
+I +C+ GK +RA ++++ + P+V +YT ++ G C+ ++ + + M +
Sbjct: 569 IILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMIS 628
Query: 338 FLLKPDTIGYTTLINCF 354
+ P ++ LINCF
Sbjct: 629 AGIVPSIATWSVLINCF 645
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 125/257 (48%), Gaps = 9/257 (3%)
Query: 257 AIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNG--CNPNVFNYTT 314
A+ F+ + + + LT+ V+I G+VD + +++ MK G C+ ++F +
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLF--IS 116
Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
+++ + + G + A E+F +K F P Y +++ R+ + ++MK G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
+ ++ T+N++L LC+ K++ A +L ++ G + SY V++ C+ G +++
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELI 494
E L F P + N L+ LCK + A + +VE G P S++ L+ ++
Sbjct: 237 E-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 495 CRGRKLLFAFELLDELV 511
C ++ AF L +++
Sbjct: 292 CNSGQIELAFSFLTQML 308
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 183/337 (54%), Gaps = 6/337 (1%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
KP + +T ++ L ++ V+ A + ++ ++P+ ++ L+ C G A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFD-QMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
+L+ M K ++ P++IT++ LID K G+F +A EL+ EM+ + I P+ TY LI+
Sbjct: 233 SLLRGMTKRKIK-PDVITFNALIDAFVKEGKFLDAEELYNEMI-RMSIAPNIFTYTSLIN 290
Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
GFC G VD A+++ M+ GC P+V YT+L+NGFCK K+ +A ++F EM L
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
+TI YTTLI F + G+ + A E+ M RG +I T+N++L LC GK+++AL +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 403 EKLW---YDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
E + DG+ N +Y ++L+ C G+LEKA+ + M R T ++ +
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 460 CKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
CKAG ++A L G KP ++ ++ + R
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 207/401 (51%), Gaps = 14/401 (3%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNL- 136
AL++F + E + + + +L+ +A+ KKF+ V + + H+ NL
Sbjct: 56 ALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVS-HDLYTCNLL 113
Query: 137 MKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ-- 194
M F S K+ + E P + ++ +N N+++ A + + NQ
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFE-PDIVTFTSLINGFCLGNRMEEAMSMV---NQMV 169
Query: 195 HLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRF 254
+ +KP+ ++ +I CK G + A + +M+ + P+++ Y++L++GLC +GR+
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR-PDVVMYTSLVNGLCNSGRW 228
Query: 255 REAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTT 314
R+A L M +K +I PD +T+N LID F + GK A+++ M PN+F YT+
Sbjct: 229 RDADSLLRGM-TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
L+NGFC EG + EA+++F M+ PD + YT+LIN FC+ +VD+A+++ EM ++G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
+ +T+ ++ G + GK A + + G+ N +Y ++L+ C G+++KA+
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 435 ELLRLMLCR---GFLPHYATSNELLVRLCKAGMAEDAAIAL 472
+ M R G P+ T N LL LC G E A +
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 196/393 (49%), Gaps = 7/393 (1%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
GF + T+ ++++ + E +++ QM K ++ ++
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
L +F ++ +P + ++ +N L S + A + L+ + ++KP+ FN LI
Sbjct: 197 LSLFDQMENYGI-RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALI 254
Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
K G A E+ EM + ++ PN+ TY++LI+G C G EA ++F M +K
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIA-PNIFTYTSLINGFCMEGCVDEARQMFYLMETKG- 312
Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
PD + Y LI+GFC+ KVD A KI M G N YTTL+ GF + GK A+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER---GCKADIVTFNIIL 386
EVF M + + P+ Y L++C C G+V +AL + ++M++R G +I T+N++L
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
GLC GK+E+AL + E + + + +Y I++ C+ G+++ A+ L + +G
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
P+ T ++ L + G+ +A + + E G
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 187/393 (47%), Gaps = 41/393 (10%)
Query: 160 TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLE 219
+R PS+ + LN++ + + D+ N + Q + + + N+L+ C+
Sbjct: 66 SRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL-QIMGVSHDLYTCNLLMNCFCQSSQPY 124
Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
A L +M K P+++T+++LI+G C R EA+ + +MV I PD + Y
Sbjct: 125 LASSFLGKMMKLGFE-PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG-IKPDVVMYTT 182
Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC------------------- 320
+ID C+ G V+ A + + M+N G P+V YT+L+NG C
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 321 ----------------KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEAL 364
KEGK +A+E+++EM + P+ YT+LIN FC G VDEA
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 365 ELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFS 424
++ M+ +GC D+V + ++ G C+ K+++A+ + ++ G+ N +Y ++
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV--EM-GFK 481
Q G+ A E+ M+ RG P+ T N LL LC G + A + + EM G
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIKE 514
P ++ +L+ +C KL A + +++ +E
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 169/336 (50%), Gaps = 8/336 (2%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
AL +F+ + E G + Y ++++ L ++ D++LR MT K F L+
Sbjct: 196 ALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
F E+++++ ++ P++ ++ +N VD A+ Y +
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIA-PNIFTYTSLINGFCMEGCVDEARQMF-YLMETKG 312
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
P+ + LI CK ++ A ++ EM + ++ N ITY+TLI G + G+ A
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT-GNTITYTTLIQGFGQVGKPNVA 371
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKN---NGCNPNVFNYTT 314
E+F MVS+ + P+ TYNVL+ C GKV +A I E M+ +G PN++ Y
Sbjct: 372 QEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
L++G C GKL++A VF++M+ + I YT +I C+AG+V A+ L + +G
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
K ++VT+ ++ GL REG EA + K+ DG+
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLI------------------- 351
NY ++ + EA ++F M P I +T L+
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 352 ----------------NCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKI 395
NCFC++ + A L +M + G + DIVTF ++ G C ++
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 396 EEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNEL 455
EEA+ M+ ++ GI + Y +++ C+ G + A+ L M G P L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 456 LVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ LC +G DA L G+ + KP+ ++ L++ + K L A EL +E++
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 222/465 (47%), Gaps = 46/465 (9%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G+ + T +++L+ K+ A++ QM K F L+ LH +
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF---LHNKA 204
Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
E + + + +P L T +N L + +DLA N L + R+K N IFN
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN-KMEAARIKANVVIFNT 263
Query: 208 LIKHHCKRGTLESAFEVLKEM-----KKSQMSY--------------------------- 235
+I CK +E A ++ EM + + ++Y
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 236 --PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRA 293
PN++T++ LID K G+ EA +L EEM+ + I PD +TYN+LI+GFC ++D A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEA 382
Query: 294 KKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
K++ +FM + C PN+ Y TL+NGFCK ++++ E+F EM L +T+ YTT+I
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
F +AG D A + K+M DI+T++I+L GLC GK++ AL + + L + LN
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
Y ++ C+ G++ +A +L + + P T N ++ LC + ++A
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTI 518
+ E G P S ++ L+ R + EL+ E+ + SG +
Sbjct: 560 KMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM--RSSGFV 602
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 159/294 (54%), Gaps = 2/294 (0%)
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
++ A ++ +M KS+ +P+++ ++ L+ + K +F I L E+M + I D TY
Sbjct: 64 VDDAVDLFGDMVKSR-PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG-ISHDLYTY 121
Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
++ I+ FCR ++ A ++ M G P++ ++L+NG+C ++ +A + D+M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
KPDT +TTLI+ + EA+ L+ +M +RGC+ D+VT+ ++ GLC+ G I+
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
AL +L K+ I N + +++ C+ +E A++L M +G P+ T N L+
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
LC G DA+ L ++E P ++ L++ + KL+ A +L +E++
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 200/419 (47%), Gaps = 20/419 (4%)
Query: 39 KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
KA V D V + +++G ++ + + AL + N + E N +
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIF 261
Query: 99 ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI-----FLNLMKHFSNCSLHERVLE-M 152
TI+D L +Y+ E + +M ET + +N + ++ S R+L M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEM--ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHH 212
K + P++ + ++ + ++ A+ + Q + P+T +N+LI
Sbjct: 320 LEK-----KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGF 373
Query: 213 CKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
C L+ A ++ K M S+ PN+ TY+TLI+G CK R + +ELF EM S+ ++
Sbjct: 374 CMHNRLDEAKQMFKFMV-SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVG 431
Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
+ +TY +I GF + G D A+ + + M +N ++ Y+ L++G C GKL A +F
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCRE 392
++ ++ + Y T+I C+AG+V EA +L + K D+VT+N ++ GLC +
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSK 548
Query: 393 GKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
++EA + K+ DG N +Y ++ + + + + EL++ M GF+ +T
Sbjct: 549 RLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 2/315 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ FN L+ K E + ++M+ +S+ +L TYS I+ C+ + A+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYSIFINCFCRRSQLSLALA 139
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
+ +M+ K PD +T + L++G+C ++ A +++ M G P+ F +TTL++G
Sbjct: 140 VLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
K EA + D+M +PD + Y T++N C+ G +D AL LL +M+ KA++
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
V FN I+ LC+ +E A+ + ++ GI N +Y ++N C G A LL
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
ML + P+ T N L+ K G +A +++ P++ ++ LL+ C +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 500 LLFAFELLDELVIKE 514
L A ++ +V K+
Sbjct: 379 LDEAKQMFKFMVSKD 393
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 188/385 (48%), Gaps = 17/385 (4%)
Query: 53 ARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFE 112
AR ++ + I + + + A+++F T E KG N TY ++++ L Y ++
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLF-TEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 113 AVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTC 172
+L M + + F L+ F E L K+H ++ S+ +
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAF----FKEGKLVEAEKLHEEMIQR-SIDPDTIT 365
Query: 173 LNLLIES----NQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
NLLI N++D A+ K+ L PN +N LI CK +E E+ +EM
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 229 KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGG 288
+ + N +TY+T+I G + G A +F++MVS +++ D +TY++L+ G C G
Sbjct: 425 SQRGL-VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCSYG 482
Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
K+D A I ++++ + N+F Y T++ G CK GK+ EA ++F + +KPD + Y
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYN 539
Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
T+I+ C + EA +L ++MKE G + T+N ++ R+ + +++++
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 409 GIYLNKASYRIVLNFSCQKGELEKA 433
G + ++ +V N G L+K+
Sbjct: 600 GFVGDASTISLVTNM-LHDGRLDKS 623
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
KVD A + M + P++ + L++ K K + + ++M+ + D Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
INCFCR ++ AL +L +M + G + DIVT + +L G C +I +A+ +++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
G + ++ +++ + +A+ L+ M+ RG P T ++ LCK G D
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI-DL 241
Query: 469 AIALFGLVEMG-FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
A+ L +E K + +++ +C+ R + A +L E+ K
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 185/349 (53%), Gaps = 4/349 (1%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
+P L +N L + + DLA N L + +++ + I+N +I CK ++ AF
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
++ +M+ + P++ TY+ LI LC GR+ +A L +M+ K+ I PD + +N LID
Sbjct: 271 DLFNKMETKGIK-PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN-INPDLVFFNALID 328
Query: 283 GFCRGGKVDRAKKIM-EFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLK 341
F + GK+ A+K+ E +K+ C P+V Y TL+ GFCK +++E EVF EM L
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 342 PDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGM 401
+T+ YTTLI+ F +A D A + K+M G DI+T+NI+L GLC G +E AL +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 402 LEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCK 461
E + + L+ +Y ++ C+ G++E +L + +G P+ T ++ C+
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 462 AGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
G+ E+A + E G P S ++ L+ R + EL+ E+
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 189/393 (48%), Gaps = 39/393 (9%)
Query: 59 FISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVL 118
+++GA I+ + EP AL + N + + K + Y TI+D L +YK + +
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 119 RQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
+M ET +F +P+ IS N
Sbjct: 274 NKM--ETKGIKPDVF---------------------TYNPL---------ISCLCNYGRW 301
Query: 179 SNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNL 238
S+ L + L+ + + P+ FN LI K G L A ++ EM KS+ +P++
Sbjct: 302 SDASRLLSDMLEKN-----INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 239 ITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIME 298
+ Y+TLI G CK R E +E+F EM S+ ++ + +TY LI GF + D A+ + +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
M ++G +P++ Y L++G C G ++ A VF+ M+ +K D + YTT+I C+AG
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
+V++ +L + +G K ++VT+ ++ G CR+G EEA + ++ DG N +Y
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
++ + G+ + EL++ M GF +T
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 199/416 (47%), Gaps = 13/416 (3%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHE 147
+ G+ + T+ T++ L ++ K A++ +M + C+ + ++ +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 148 RVLEMFHKIHPITREKPSLKAISTCLNLLIES-----NQVDLAQNFLKYSNQHLRLKPNT 202
L + +K+ EK ++A N +I+ + D F K + + KP+
Sbjct: 233 LALNLLNKM-----EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI--KPDV 285
Query: 203 CIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFE 262
+N LI C G A +L +M + ++ P+L+ ++ LID K G+ EA +L++
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNIN-PDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 263 EMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKE 322
EMV PD + YN LI GFC+ +V+ ++ M G N YTTL++GF +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 323 GKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTF 382
A+ VF +M + + PD + Y L++ C G V+ AL + + M++R K DIVT+
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 383 NIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLC 442
++ LC+ GK+E+ + L G+ N +Y +++ C+KG E+A L M
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 443 RGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGR 498
G LP+ T N L+ + G +A + + GF ++ ++ L+ ++ GR
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGR 580
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 200/422 (47%), Gaps = 15/422 (3%)
Query: 98 YATILDKLARYKKFEAVDAVLRQMTYETCK---FHEGIFLNLMKHFSNCSLHERVLEMFH 154
++ +L +A+ KF+ V ++ QM + IF+N S SL +L
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 155 KIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK 214
K+ PS+ +++ LN N++ A + + + +P+T F L+ +
Sbjct: 138 KLG----YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQ 192
Query: 215 RGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP 272
A +++ M K Q P+L+TY +I+GLCK G A+ L +M K +I
Sbjct: 193 HNKASEAVALVERMVVKGCQ---PDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEA 248
Query: 273 DALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVF 332
D + YN +IDG C+ +D A + M+ G P+VF Y L++ C G+ +A +
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 333 DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM-KERGCKADIVTFNIILGGLCR 391
+M + PD + + LI+ F + G++ EA +L EM K + C D+V +N ++ G C+
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 392 EGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYAT 451
++EE + + ++ G+ N +Y +++ Q + + A + + M+ G P T
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 452 SNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
N LL LC G E A + + + K + ++ ++E +C+ K+ ++L L
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 512 IK 513
+K
Sbjct: 489 LK 490
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTY 277
L+ A + +M KS+ +P+++ +S L+ + K +F I L E+M + I + TY
Sbjct: 56 LDDAIGLFGDMVKSR-PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTY 113
Query: 278 NVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337
++ I+ FCR ++ A I+ M G P++ +L+NGFC ++ EA + D+M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 338 FLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEE 397
+PDT+ +TTL++ + + EA+ L++ M +GC+ D+VT+ ++ GLC+ G+ +
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 398 ALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
AL +L K+ I + Y +++ C+ ++ A +L M +G P T N L+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 458 RLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
LC G DA+ L ++E P+ + L++ + KL+ A +L DE+V
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
K+D A + M + P++ ++ L++ K K + ++M+N + + Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
IN FCR ++ AL +L +M + G IVT N +L G C +I EA+ +++++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
G + ++ +++ Q + +A+ L+ M+ +G P T ++ LCK G D
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG-EPDL 233
Query: 469 AIALFGLVEMGFKPESDS--WALLVELICRGRKLLFAFELLDELVIK 513
A+ L +E G K E+D + +++ +C+ + + AF+L +++ K
Sbjct: 234 ALNLLNKMEKG-KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 173/304 (56%), Gaps = 7/304 (2%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCK---RGTLE 219
+P++ + +N L ++ +++ A++ ++ + PN +N LI +CK G +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVME-DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 220 SAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNV 279
A VLKEM ++ +S PNL T++ LIDG K+ ++++F+EM+ +D + P+ ++YN
Sbjct: 279 KADAVLKEMVENDVS-PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD-VKPNVISYNS 336
Query: 280 LIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFL 339
LI+G C GGK+ A + + M + G PN+ Y L+NGFCK L+EA ++F +K
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 340 LKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEAL 399
P T Y LI+ +C+ G++D+ L +EM+ G D+ T+N ++ GLCR G IE A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 400 GMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRL 459
+ ++L G+ + ++ I++ C+KGE KA LL+ M G P + T N ++
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 460 CKAG 463
CK G
Sbjct: 516 CKEG 519
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 174/303 (57%), Gaps = 6/303 (1%)
Query: 197 RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK---NGR 253
+++PN FN++I CK G + A +V+++MK S PN+++Y+TLIDG CK NG+
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCS-PNVVSYNTLIDGYCKLGGNGK 276
Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
+A + +EMV D + P+ T+N+LIDGF + + + K+ + M + PNV +Y
Sbjct: 277 MYKADAVLKEMVEND-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335
Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
+L+NG C GK+ EA + D+M + ++P+ I Y LIN FC+ + EAL++ +K +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
G +N+++ C+ GKI++ + E++ +GI + +Y ++ C+ G +E A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEL 493
+L + +G LP T + L+ C+ G + AA+ L + +MG KP ++ ++++
Sbjct: 456 KKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 494 ICR 496
C+
Sbjct: 515 YCK 517
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 154/279 (55%), Gaps = 4/279 (1%)
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
+KPN +N LI C G + A + +M + + PNLITY+ LI+G CKN +EA
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ-PNLITYNALINGFCKNDMLKEA 385
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+++F + + + P YN+LID +C+ GK+D + E M+ G P+V Y L+
Sbjct: 386 LDMFGSVKGQGAV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
G C+ G ++ AK++FD++ + L PD + + L+ +CR G +A LLKEM + G K
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDG-IYLNKASYRIVLNFSCQKGELEKAIEL 436
+T+NI++ G C+EG ++ A M ++ + + +N ASY ++L QKG+LE A L
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563
Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGL 475
L ML +G +P+ T + + G D LF +
Sbjct: 564 LNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNV 602
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 169/317 (53%), Gaps = 7/317 (2%)
Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYP-NLITYSTLIDGLCKNGRFREAIE 259
N+ I ++L+ + E FE K + Y + ++ L+ L K R +
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFK--RSGYYGYKLSALSCKPLMIALLKENRSADVEY 209
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
+++EM+ + +I P+ T+NV+I+ C+ GK+++A+ +ME MK GC+PNV +Y TL++G+
Sbjct: 210 VYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 320 CK---EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCK 376
CK GK+ +A V EM + P+ + LI+ F + + ++++ KEM ++ K
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 377 ADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIEL 436
+++++N ++ GLC GKI EA+ M +K+ G+ N +Y ++N C+ L++A+++
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 437 LRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 496
+ +G +P N L+ CK G +D + G P+ ++ L+ +CR
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 497 GRKLLFAFELLDELVIK 513
+ A +L D+L K
Sbjct: 449 NGNIEAAKKLFDQLTSK 465
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 158/290 (54%), Gaps = 6/290 (2%)
Query: 224 VLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDG 283
V KEM + ++ PN+ T++ +I+ LCK G+ +A ++ E+M P+ ++YN LIDG
Sbjct: 210 VYKEMIRRKIQ-PNVFTFNVVINALCKTGKMNKARDVMEDMKVYG-CSPNVVSYNTLIDG 267
Query: 284 FCR---GGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
+C+ GK+ +A +++ M N +PN+ + L++GF K+ L + +VF EM + +
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
KP+ I Y +LIN C G++ EA+ + +M G + +++T+N ++ G C+ ++EAL
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLC 460
M + G Y ++++ C+ G+++ L M G +P T N L+ LC
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 461 KAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
+ G E AA LF + P+ ++ +L+E CR + A LL E+
Sbjct: 448 RNGNIE-AAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 169/365 (46%), Gaps = 50/365 (13%)
Query: 198 LKPNTCI--FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
L P+ C+ ++ L+K+ +LE F++L + ++ Y + ++ +DG +NG
Sbjct: 79 LDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAK-RYSKIRSF---LDGFVRNGSDH 134
Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
+ +F + D + +++ ++L+ + + + + + G + + L
Sbjct: 135 QVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194
Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
M KE + + + V+ EM ++P+ + +IN C+ G++++A +++++MK GC
Sbjct: 195 MIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 376 KADIVTFNIILGGLCR---EGKIEEALGMLEKL-------------------WYD----- 408
++V++N ++ G C+ GK+ +A +L+++ W D
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 409 -----------GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLV 457
+ N SY ++N C G++ +AI + M+ G P+ T N L+
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 458 RLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVELICRGRKLLFAFELLDEL----VI 512
CK M ++ A+ +FG V+ G P + + +L++ C+ K+ F L +E+ ++
Sbjct: 375 GFCKNDMLKE-ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 513 KESGT 517
+ GT
Sbjct: 434 PDVGT 438
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 5/245 (2%)
Query: 36 NTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNN 95
N K + D V A + I++ A I+ + AL++F +V Q G
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ-GAVPTT 401
Query: 96 ATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHK 155
Y ++D + K + A+ +M E G + L+ E ++F +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 156 IHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKR 215
+ ++ P L + + A LK ++ + LKP +NI++K +CK
Sbjct: 462 L--TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSK-MGLKPRHLTYNIVMKGYCKE 518
Query: 216 GTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDAL 275
G L++A + +M+K + N+ +Y+ L+ G + G+ +A L EM+ K ++P+ +
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG-LVPNRI 577
Query: 276 TYNVL 280
TY ++
Sbjct: 578 TYEIV 582
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 226/465 (48%), Gaps = 49/465 (10%)
Query: 88 QKGFNHNNATYATILDKL-ARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH 146
+KGF + + +L L A + +A+D VLR+MT C + + L+K + +
Sbjct: 115 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRS 174
Query: 147 ERVLEMFHKIHPI--TREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLK----P 200
+ LE+ H + P + + +T +N + D A YS H L P
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA-----YSTYHEMLDRGILP 229
Query: 201 NTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIEL 260
+ +N +I CK ++ A EVL M K+ + P+ +TY++++ G C +G+ +EAI
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV-MPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 261 FEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFC 320
++M S D + PD +TY++L+D C+ G+ A+KI + M G P + Y TL+ G+
Sbjct: 289 LKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA 347
Query: 321 KEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIV 380
+G L E + D M + PD ++ LI + + G+VD+A+ + +M+++G + V
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Query: 381 TFNIILGGLCREGKIEEALGMLEKL------------------------WY--------- 407
T+ ++G LC+ G++E+A+ E++ W
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467
Query: 408 --DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMA 465
GI LN + +++ C++G + ++ +L LM+ G P+ T N L+ C AG
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 466 EDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
++A L G+V +G KP + +++ L+ C+ ++ A L E+
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 173/314 (55%), Gaps = 3/314 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEM--KKSQMSYPNLITYSTLIDGLCKNGRFREA 257
PN +NIL+K C + A E+L M + S P++++Y+T+I+G K G +A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+ EM+ + ILPD +TYN +I C+ +D+A +++ M NG P+ Y ++++
Sbjct: 216 YSTYHEMLDRG-ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
G+C G+ +EA +M++ ++PD + Y+ L++ C+ GR EA ++ M +RG K
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
+I T+ +L G +G + E G+L+ + +GI+ + + I++ ++G++++A+ +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
M +G P+ T ++ LCK+G EDA + +++ G P + + L+ +C
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 498 RKLLFAFELLDELV 511
K A EL+ E++
Sbjct: 455 NKWERAEELILEML 468
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 206/426 (48%), Gaps = 14/426 (3%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G + TY+ ++D L + + + MT K + L++ ++ +
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT---KGAL 352
Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-LKPNTCIFN 206
+EM + + R P S + + +VD Q L +S + L PN +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD--QAMLVFSKMRQQGLNPNAVTYG 410
Query: 207 ILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVS 266
+I CK G +E A ++M +S P I Y++LI GLC ++ A EL EM+
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNSLIHGLCTCNKWERAEELILEMLD 469
Query: 267 KDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQ 326
+ I + + +N +ID C+ G+V ++K+ E M G PNV Y TL+NG+C GK+
Sbjct: 470 RG-ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 327 EAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIIL 386
EA ++ M + LKP+T+ Y+TLIN +C+ R+++AL L KEM+ G DI+T+NIIL
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 387 GGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFL 446
GL + + A + ++ G + ++Y I+L+ C+ + A+++ + +
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 447 PHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFEL 506
T N ++ L K G ++A G P ++ L+ E I G+ LL E
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII-GQGLL---EE 704
Query: 507 LDELVI 512
LD+L +
Sbjct: 705 LDQLFL 710
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 161/301 (53%), Gaps = 12/301 (3%)
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
+ P+ C + ILI C+ G L+ F L + K + I ++ L+ GLC + R +A
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 141
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNN---GCNPNVFNYTT 314
+++ +++ +P+ +YN+L+ G C + A +++ M ++ G P+V +YTT
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 315 LMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
++NGF KEG +A + EM + + PD + Y ++I C+A +D+A+E+L M + G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 375 CKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAI 434
D +T+N IL G C G+ +EA+G L+K+ DG+ + +Y +++++ C+ G +A
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 435 ELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM----GFKPESDSWALL 490
++ M RG P T LL G A + + GL+++ G P+ +++L
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKG----ALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 491 V 491
+
Sbjct: 378 I 378
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 191/428 (44%), Gaps = 54/428 (12%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
A+ +F+ + Q+G N N TY ++ L + + E QM E ++ +L+
Sbjct: 390 AMLVFSKM-RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 138 KHFSNCSLHER----VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSN 193
C+ ER +LEM + CLN
Sbjct: 449 HGLCTCNKWERAEELILEMLDR--------------GICLN------------------- 475
Query: 194 QHLRLKPNTCIFNILIKHHCKRGTL---ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCK 250
T FN +I HCK G + E FE++ + PN+ITY+TLI+G C
Sbjct: 476 --------TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK----PNVITYNTLINGYCL 523
Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
G+ EA++L MVS + P+ +TY+ LI+G+C+ +++ A + + M+++G +P++
Sbjct: 524 AGKMDEAMKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582
Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
Y ++ G + + AKE++ + + + Y +++ C+ D+AL++ + +
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
K + TFNI++ L + G+ +EA + +G+ N +YR++ +G L
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702
Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
E+ +L M G N ++ L + G A L + E F E+ + +L
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLF 762
Query: 491 VELICRGR 498
++L+ G+
Sbjct: 763 IDLLSGGK 770
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 129/283 (45%), Gaps = 39/283 (13%)
Query: 268 DQILPDALTYNVLIDGFCRGGKVD--------------------------------RAKK 295
D++ PD TY +LI CR G++D R
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 296 IMEF----MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEM---KNFLLKPDTIGYT 348
M+ M GC PNVF+Y L+ G C E + QEA E+ M + PD + YT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 349 TLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD 408
T+IN F + G D+A EM +RG D+VT+N I+ LC+ +++A+ +L + +
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 409 GIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
G+ + +Y +L+ C G+ ++AI L+ M G P T + L+ LCK G +A
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
+ + G KPE ++ L++ L+ LLD +V
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 3/159 (1%)
Query: 361 DEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEA--LGMLEKLWYDGIYLNKASYR 418
++A + E+ RG A I N L + R+ + + D + + +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAA-IALFGLVE 477
I++ C+ G L+ L ++ +GF LL LC DA I L + E
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 478 MGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESG 516
+G P S+ +L++ +C + A ELL + G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGG 190
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 171/316 (54%), Gaps = 2/316 (0%)
Query: 196 LRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
LR P+ + L++ KRG +E A ++K + +S PNL Y+ LID LCK +F
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS-PNLFVYNALIDSLCKGRKFH 384
Query: 256 EAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTL 315
EA LF+ M K + P+ +TY++LID FCR GK+D A + M + G +V+ Y +L
Sbjct: 385 EAELLFDRM-GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 316 MNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGC 375
+NG CK G + A+ EM N L+P + YT+L+ +C G++++AL L EM +G
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 376 KADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIE 435
I TF +L GL R G I +A+ + ++ + N+ +Y +++ C++G++ KA E
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 436 LLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELIC 495
L+ M +G +P + L+ LC G A +A + + GL + + + L+ C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 496 RGRKLLFAFELLDELV 511
R KL A + E+V
Sbjct: 624 REGKLEEALSVCQEMV 639
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 227/501 (45%), Gaps = 61/501 (12%)
Query: 68 LIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT----- 122
LI +P+ L FN + +GF+H+ A++ ++ L + F ++L+ +
Sbjct: 77 LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALK 136
Query: 123 -----------YETCKFHEGIFLNLM-KHFSNCSLHERVLE---MFHKIHPITREKPSLK 167
YE CK +L+ +H+ RVL+ +F + P ++
Sbjct: 137 PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVR---SRRVLDGVLVFKMMITKVSLLPEVR 193
Query: 168 AISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
+S L+ L++ LA + ++P+ I+ +I+ C+ L A E++
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFN-DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR- 286
M+ + N++ Y+ LIDGLCK + EA+ + +++ KD + PD +TY L+ G C+
Sbjct: 253 MEATGCDV-NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD-LKPDVVTYCTLVYGLCKV 310
Query: 287 ----------------------------------GGKVDRAKKIMEFMKNNGCNPNVFNY 312
GK++ A +++ + + G +PN+F Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 313 TTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
L++ CK K EA+ +FD M L+P+ + Y+ LI+ FCR G++D AL L EM +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
G K + +N ++ G C+ G I A G + ++ + +Y ++ C KG++ K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 433 AIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE 492
A+ L M +G P T LL L +AG+ DA + E KP ++ +++E
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 493 LICRGRKLLFAFELLDELVIK 513
C + AFE L E+ K
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEK 571
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 208/408 (50%), Gaps = 4/408 (0%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G + N Y ++D L + +KF + + +M + ++ + L+ F +
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILI 209
L ++ T K S+ ++ +N + + A+ F+ + +L+P + L+
Sbjct: 422 LSFLGEMVD-TGLKLSVYPYNSLINGHCKFGDISAAEGFMA-EMINKKLEPTVVTYTSLM 479
Query: 210 KHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
+C +G + A + EM ++ P++ T++TL+ GL + G R+A++LF EM ++
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIA-PSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWN 537
Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
+ P+ +TYNV+I+G+C G + +A + ++ M G P+ ++Y L++G C G+ EAK
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
D + + + I YT L++ FCR G+++EAL + +EM +RG D+V + +++ G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHY 449
+ + G+L+++ G+ + Y +++ + G+ ++A + LM+ G +P+
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 450 ATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
T ++ LCKAG +A + + + P ++ ++++ +G
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 209/465 (44%), Gaps = 51/465 (10%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK---HFSNCSLH 146
G N+ TY+ ++D R K + + L +M K + +L+ F + S
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 147 ERVL-EMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
E + EM +K + +P++ ++ + +++ A L + + P+ F
Sbjct: 457 EGFMAEMINK-----KLEPTVVTYTSLMGGYCSKGKINKALR-LYHEMTGKGIAPSIYTF 510
Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
L+ + G + A ++ EM + + PN +TY+ +I+G C+ G +A E +EM
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVK-PNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKL 325
K I+PD +Y LI G C G+ AK ++ + C N YT L++GFC+EGKL
Sbjct: 570 EKG-IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 326 QEAKEV-----------------------------------FDEMKNFLLKPDTIGYTTL 350
+EA V EM + LKPD + YT++
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 351 INCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGI 410
I+ + G EA + M GC + VT+ ++ GLC+ G + EA + K+
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 411 YLNKASYRIVLNFSCQKGE--LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDA 468
N+ +Y L+ KGE ++KA+EL +L +G L + AT N L+ C+ G E+A
Sbjct: 749 VPNQVTYGCFLDI-LTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEA 806
Query: 469 AIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
+ + ++ G P+ ++ ++ +CR + A EL + + K
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 54/287 (18%)
Query: 139 HFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLA------QNFLKYS 192
H NC L+E +H RE +A+S C ++ +DL LK+
Sbjct: 604 HKGNCELNEICYTGL--LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 193 NQHL-----------RLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITY 241
++ L LKP+ I+ +I K G + AF + ++ ++ PN +TY
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW-DLMINEGCVPNEVTY 720
Query: 242 STLIDGLCKNGRFREAIEL------------------FEEMVSKDQI------------- 270
+ +I+GLCK G EA L F ++++K ++
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 271 ---LPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
L + TYN+LI GFCR G+++ A +++ M +G +P+ YTT++N C+ +++
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERG 374
A E+++ M ++PD + Y TLI+ C AG + +A EL EM +G
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 193/376 (51%), Gaps = 8/376 (2%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G+ + T ++L+ + A++ QM K F L+ LH +
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF---LHNKA 199
Query: 150 LEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNI 207
E I + + +P L +N L + DLA N L + +++ N I++
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN-KMEAAKIEANVVIYST 258
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
+I CK + A + EM+ + PN+ITYS+LI LC GR+ +A L +M+ +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVR-PNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
+I P+ +T++ LID F + GK+ +A+K+ E M +PN+F Y++L+NGFC +L E
Sbjct: 318 -KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
AK++ + M P+ + Y TLIN FC+A RVD+ +EL +EM +RG + VT+ ++
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
G + + A + +++ G++ N +Y I+L+ C+ G+L KA+ + + P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 448 HYATSNELLVRLCKAG 463
T N ++ +CKAG
Sbjct: 497 DIYTYNIMIEGMCKAG 512
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 178/337 (52%), Gaps = 3/337 (0%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
KP +T ++ L N+ A + Q +P+ + ++ CKRG + A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-GCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLID 282
+L +M+ +++ N++ YST+ID LCK +A+ LF EM +K + P+ +TY+ LI
Sbjct: 239 NLLNKMEAAKIE-ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG-VRPNVITYSSLIS 296
Query: 283 GFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
C G+ A +++ M NPN+ ++ L++ F K+GKL +A+++++EM + P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
+ Y++LIN FC R+ EA ++L+ M + C ++VT+N ++ G C+ ++++ + +
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKA 462
++ G+ N +Y +++ Q + + A + + M+ G P+ T N LL LCK
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 463 GMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
G A + L +P+ ++ +++E +C+ K
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 207/433 (47%), Gaps = 8/433 (1%)
Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLM 137
A+ +F +++ + F + ++ +L +A+ KF+ V + +M + + L+
Sbjct: 62 AIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 138 KHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR 197
F CS L + K+ + E P + +++ LN N++ A + + +
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYE-PDIVTLNSLLNGFCHGNRISDAVALVDQMVE-MG 178
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
KP+T F LI A ++ M + P+L+TY +++GLCK G A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ-PDLVTYGAVVNGLCKRGDTDLA 237
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+ L +M + +I + + Y+ +ID C+ D A + M+N G PNV Y++L++
Sbjct: 238 LNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
C G+ +A + +M + P+ + ++ LI+ F + G++ +A +L +EM +R
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
+I T++ ++ G C ++ EA MLE + N +Y ++N C+ ++K +EL
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
R M RG + + T L+ +A ++A + +V +G P ++ +L++ +C+
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 498 RKL---LFAFELL 507
KL + FE L
Sbjct: 477 GKLAKAMVVFEYL 489
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 155/297 (52%), Gaps = 8/297 (2%)
Query: 218 LESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILP---DA 274
L+ A + M +S+ +P++I +S L+ + K +F I E+M +IL +
Sbjct: 59 LDDAIGLFGVMAQSR-PFPSIIEFSKLLSAIAKMNKFDLVISFGEKM----EILGISHNL 113
Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
TYN+LI+ FCR ++ A ++ M G P++ +L+NGFC ++ +A + D+
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
M KPDT+ +TTLI+ + EA+ L+ M +RGC+ D+VT+ ++ GLC+ G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 395 IEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
+ AL +L K+ I N Y V++ C+ + A+ L M +G P+ T +
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 455 LLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
L+ LC G DA+ L ++E P +++ L++ + KL+ A +L +E++
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 1/278 (0%)
Query: 237 NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKI 296
NL TY+ LI+ C+ R A+ L +M+ K PD +T N L++GFC G ++ A +
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMM-KLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170
Query: 297 MEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCR 356
++ M G P+ +TTL++G K EA + D M +PD + Y ++N C+
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230
Query: 357 AGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKAS 416
G D AL LL +M+ +A++V ++ ++ LC+ ++AL + ++ G+ N +
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 417 YRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLV 476
Y +++ C G A LL M+ R P+ T + L+ K G A ++
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 477 EMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKE 514
+ P +++ L+ C +L A ++L+ ++ K+
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 110/259 (42%), Gaps = 37/259 (14%)
Query: 289 KVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYT 348
++D A + M + P++ ++ L++ K K ++M+ + + Y
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 349 TLINCFCR-----------------------------------AGRVDEALELLKEMKER 373
LINCFCR R+ +A+ L+ +M E
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKA 433
G K D VTF ++ GL K EA+ +++++ G + +Y V+N C++G+ + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 434 IELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVE-MGFKPESDSWALLVE 492
+ LL M + + ++ LCK ED A+ LF +E G +P +++ L+
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKY-RHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 493 LICRGRKLLFAFELLDELV 511
+C + A LL +++
Sbjct: 297 CLCNYGRWSDASRLLSDMI 315
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 39 KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATY 98
K +P + T +DA F+ G L+K EK + + ++ + N TY
Sbjct: 318 KINPNLVTFSALIDA-----FVKKG---KLVKAEKLYEEMI--------KRSIDPNIFTY 361
Query: 99 ATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHP 158
+++++ + +L M + C + + L+ F ++ +E+F ++
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 159 ITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTL 218
++ +T ++ ++ D AQ K + + PN +NIL+ CK G L
Sbjct: 422 RGLVGNTV-TYTTLIHGFFQARDCDNAQMVFK-QMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 219 ESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFR 255
A V + +++S M P++ TY+ +I+G+CK G+++
Sbjct: 480 AKAMVVFEYLQRSTME-PDIYTYNIMIEGMCKAGKWK 515
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 310 FNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE 369
++Y ++ + +L +A +F M P I ++ L++ + + D + ++
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 370 MKERGCKADIVTFNIILGGLCR---EGKIEEALGMLEKLWY--DGIYLNKASYRIVLNFS 424
M+ G ++ T+NI++ CR LG + KL Y D + LN +LN
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNS-----LLNGF 158
Query: 425 CQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPES 484
C + A+ L+ M+ G+ P T L+ L A +A + +V+ G +P+
Sbjct: 159 CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218
Query: 485 DSWALLVELICRGRKLLFAFELLDEL 510
++ +V +C+ A LL+++
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKM 244
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 206/437 (47%), Gaps = 52/437 (11%)
Query: 75 PQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMT------------ 122
P+ LEIFN S+Q+ F + Y ++ L+R + ++ + L ++
Sbjct: 84 PEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGE 143
Query: 123 ----YETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITR----------------- 161
++ F +F ++K ++ L + L +F + R
Sbjct: 144 LVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRK 203
Query: 162 -----------------EKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
P + S +N S VD A F K + L L+ N
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
+N LI + G +E VL+ M + +S N++TY++LI G CK G EA +FE +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVS-RNVVTYTSLIKGYCKKGLMEEAEHVFE-L 321
Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
+ + +++ D Y VL+DG+CR G++ A ++ + M G N +L+NG+CK G+
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 325 LQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNI 384
L EA+++F M ++ LKPD Y TL++ +CRAG VDEAL+L +M ++ ++T+NI
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 385 ILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRG 444
+L G R G + L + + + G+ ++ S +L + G+ +A++L +L RG
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 445 FLPHYATSNELLVRLCK 461
L T N ++ LCK
Sbjct: 502 LLTDTITLNVMISGLCK 518
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 20/399 (5%)
Query: 90 GFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHERV 149
G N TY ++++ A E + VLR M+ + + +L+K + L E
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 150 LEMFHKIHPITREKPSLKAISTCLNLLIES--------NQVDLAQNFLKYSNQHLRLKPN 201
+F + +EK L A +L++ + V + N ++ + ++ N
Sbjct: 316 EHVFE----LLKEK-KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE-----IGVRTN 365
Query: 202 TCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELF 261
T I N LI +CK G L A ++ M + P+ TY+TL+DG C+ G EA++L
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLK-PDHHTYNTLVDGYCRAGYVDEALKLC 424
Query: 262 EEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCK 321
++M K +++P +TYN+L+ G+ R G + + M G N + + +TL+ K
Sbjct: 425 DQMCQK-EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Query: 322 EGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
G EA ++++ + L DTI +I+ C+ +V+EA E+L + CK + T
Sbjct: 484 LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT 543
Query: 382 FNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLML 441
+ + G + G ++EA + E + GI+ Y +++ + + L K +L+ +
Sbjct: 544 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 603
Query: 442 CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGF 480
RG P AT L+ C GM + A F ++E G
Sbjct: 604 ARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 178/392 (45%), Gaps = 46/392 (11%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQ--HLRLKPNTCIFNILIKHHCKRGTLES 220
KP +T ++ + VD A LK +Q + P +NIL+K + + G
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEA---LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 221 AFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVL 280
+ K M K ++ + I+ STL++ L K G F EA++L+E ++++ +L D +T NV+
Sbjct: 455 VLSLWKMMLKRGVN-ADEISCSTLLEALFKLGDFNEAMKLWENVLARG-LLTDTITLNVM 512
Query: 281 IDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLL 340
I G C+ KV+ AK+I++ + C P V Y L +G+ K G L+EA V + M+ +
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 341 KPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALG 400
P Y TLI+ + +++ +L+ E++ RG + T+ ++ G C G I++A
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 401 MLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL-----MLCRGF---------- 445
++ GI LN + N + ++++A LL+ +L G+
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEAS 692
Query: 446 -----------------------LPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG-FK 481
+P+ N + LCKAG EDA L+ F
Sbjct: 693 ATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI 752
Query: 482 PESDSWALLVELICRGRKLLFAFELLDELVIK 513
P+ ++ +L+ + AF L DE+ +K
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALK 784
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%)
Query: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKK 295
PN I Y+ I GLCK G+ +A +LF +++S D+ +PD TY +LI G G +++A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFC 355
+ + M G PN+ Y L+ G CK G + A+ + ++ + P+ I Y TLI+
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 356 RAGRVDEALELLKEMKERG 374
++G V EA+ L ++M E+G
Sbjct: 837 KSGNVAEAMRLKEKMIEKG 855
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 8/254 (3%)
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
L P + LI C G ++ A+ EM + ++ N+ S + + L + + EA
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL-NVNICSKIANSLFRLDKIDEA 665
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCN----PNVFNYT 313
L +++V D +LP + ++ + +KI E ++N+ PN Y
Sbjct: 666 CLLLQKIVDFDLLLPGYQSLKEFLEA--SATTCLKTQKIAESVENSTPKKLLVPNNIVYN 723
Query: 314 TLMNGFCKEGKLQEAKEVF-DEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKE 372
+ G CK GKL++A+++F D + + PD YT LI+ AG +++A L EM
Sbjct: 724 VAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMAL 783
Query: 373 RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEK 432
+G +IVT+N ++ GLC+ G ++ A +L KL GI N +Y +++ + G + +
Sbjct: 784 KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 843
Query: 433 AIELLRLMLCRGFL 446
A+ L M+ +G +
Sbjct: 844 AMRLKEKMIEKGLV 857
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 134/264 (50%), Gaps = 2/264 (0%)
Query: 252 GRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFN 311
G + A+ +F+ M + +I P L+ N L+ R G+ A + + M + +P+VF
Sbjct: 169 GLVKNALHVFDNMGNYGRI-PSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFT 227
Query: 312 YTTLMNGFCKEGKLQEAKEVFDEMKNFL-LKPDTIGYTTLINCFCRAGRVDEALELLKEM 370
+ ++N +C+ G + +A E ++ L L+ + + Y +LIN + G V+ +L+ M
Sbjct: 228 CSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLM 287
Query: 371 KERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGEL 430
ERG ++VT+ ++ G C++G +EEA + E L + ++ Y ++++ C+ G++
Sbjct: 288 SERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQI 347
Query: 431 EKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALL 490
A+ + M+ G + N L+ CK+G +A + + KP+ ++ L
Sbjct: 348 RDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407
Query: 491 VELICRGRKLLFAFELLDELVIKE 514
V+ CR + A +L D++ KE
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKE 431
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 228/458 (49%), Gaps = 22/458 (4%)
Query: 65 AISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE 124
A+S E +P AL+IF + K N T T+L L RY ++ + R++ +
Sbjct: 137 ALSAYLHEGKPHVALQIFQKMIRLK-LKPNLLTCNTLLIGLVRYPSSFSISSA-REVFDD 194
Query: 125 TCKFHEGIFLN------LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIE 178
K G+ LN L+ + E L M ++ + P +T L + +
Sbjct: 195 MVKI--GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 179 SNQV-DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPN 237
++ DL + L L PN +N L+ +CK G+L+ AF++++ MK++ + P+
Sbjct: 253 KGRLSDLKELLLDMKKNGLV--PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV-LPD 309
Query: 238 LITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIM 297
L TY+ LI+GLC G RE +EL + M S ++ PD +TYN LIDG G A+K+M
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSL-KLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 298 EFMKNNGCNPNVFNYTTLMNGFCKEGK----LQEAKEVFDEMKNFLLKPDTIGYTTLINC 353
E M+N+G N + + CKE K ++ KE+ D M F PD + Y TLI
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD-MHGF--SPDIVTYHTLIKA 425
Query: 354 FCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLN 413
+ + G + ALE+++EM ++G K + +T N IL LC+E K++EA +L G ++
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 414 KASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALF 473
+ +Y ++ ++ ++EKA+E+ M P +T N L+ LC G E A
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 474 GLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELV 511
L E G P+ ++ ++ C+ ++ AFE +E +
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 167/346 (48%), Gaps = 37/346 (10%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ C +NILI C G++ E++ MK ++ P+++TY+TLIDG + G EA +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQ-PDVVTYNTLIDGCFELGLSLEARK 366
Query: 260 LFEEM----VSKDQIL-------------------------------PDALTYNVLIDGF 284
L E+M V +Q+ PD +TY+ LI +
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 285 CRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDT 344
+ G + A ++M M G N T+++ CKE KL EA + + D
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 345 IGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEK 404
+ Y TLI F R +V++ALE+ EMK+ + TFN ++GGLC GK E A+ ++
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 405 LWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGM 464
L G+ + +++ ++ C++G +EKA E + F P T N LL LCK GM
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 465 AEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDEL 510
E A L+E + ++ ++ ++ C+ +KL A++LL E+
Sbjct: 607 TEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 173/360 (48%), Gaps = 38/360 (10%)
Query: 187 NFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMS------------ 234
N L + N HL P+ +F+I + + G A ++ ++M + ++
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175
Query: 235 ---YP----------------------NLITYSTLIDGLCKNGRFREAIELFEEMVSKDQ 269
YP N+ T++ L++G C G+ +A+ + E MVS+ +
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235
Query: 270 ILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAK 329
+ PD +TYN ++ + G++ K+++ MK NG PN Y L+ G+CK G L+EA
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 330 EVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGL 389
++ + MK + PD Y LIN C AG + E LEL+ MK + D+VT+N ++ G
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 390 CREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLR-LMLCRGFLPH 448
G EA ++E++ DG+ N+ ++ I L + C++ + E ++ L+ GF P
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
T + L+ K G A + + + G K + + +++ +C+ RKL A LL+
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 169/323 (52%), Gaps = 14/323 (4%)
Query: 87 EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI--FLNLMKHFSNCS 144
E G N T+ L L + +K EAV ++++ + F I + L+K +
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV-DMHGFSPDIVTYHTLIKAYLKVG 430
Query: 145 LHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCI 204
LEM ++ + ++ ++T L+ L + ++D A N L +++ +
Sbjct: 431 DLSGALEMMREMGQKGIKMNTI-TLNTILDALCKERKLDEAHNLLNSAHKR-GFIVDEVT 488
Query: 205 FNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEM 264
+ LI + +E A E+ EMKK +++ P + T+++LI GLC +G+ A+E F+E+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKIT-PTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 265 VSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGK 324
++ +LPD T+N +I G+C+ G+V++A + + P+ + L+NG CKEG
Sbjct: 548 -AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 325 LQEAKEVFDEMKNFLLKP---DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVT 381
++A F N L++ DT+ Y T+I+ FC+ ++ EA +LL EM+E+G + D T
Sbjct: 607 TEKALNFF----NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Query: 382 FNIILGGLCREGKIEEALGMLEK 404
+N + L +GK+ E +L+K
Sbjct: 663 YNSFISLLMEDGKLSETDELLKK 685
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 36/273 (13%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ ++ LIK + K G L A E+++EM + + N IT +T++D LCK + EA
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM-NTITLNTILDALCKERKLDEAHN 472
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
L K + D +TY LI GF R KV++A ++ + MK P V + +L+ G
Sbjct: 473 LLNS-AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKE---------- 369
C GK + A E FDE+ L PD + ++I +C+ GRV++A E E
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 370 --------------MKERGC----------KADIVTFNIILGGLCREGKIEEALGMLEKL 405
M E+ + D VT+N ++ C++ K++EA +L ++
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Query: 406 WYDGIYLNKASYRIVLNFSCQKGELEKAIELLR 438
G+ ++ +Y ++ + G+L + ELL+
Sbjct: 652 EEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 163 KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAF 222
KP + LN L + + A NF + + +T +N +I CK L+ A+
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAY 645
Query: 223 EVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV----------------- 265
++L EM++ + P+ TY++ I L ++G+ E EL ++
Sbjct: 646 DLLSEMEEKGLE-PDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKN 704
Query: 266 -----SKDQILPDALTYNVLIDGFCRGGKV 290
SK+++ +A+ Y+ +ID C G++
Sbjct: 705 PATSESKEELNTEAIAYSDVIDELCSRGRL 734
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 217/446 (48%), Gaps = 46/446 (10%)
Query: 73 KEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGI 132
++P A F +QK + HN Y +++D LA K + + R ++ E KF +
Sbjct: 130 EKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI----RFVSSEIKKFEFPM 185
Query: 133 FLN----LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNF 188
++ L+K F + E +L ++ K+ E P+L + +N L+ + VD A+
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIE-PTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 189 LKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM-----KKSQMSYPNLI---- 239
+ R+KP+ +N +IK +CK G + A E L++M + +++Y +I
Sbjct: 245 FEVMESG-RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 240 -------------------------TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDA 274
+S +I GLCK G+ E +FE M+ K P+
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNV 362
Query: 275 LTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDE 334
Y VLIDG+ + G V+ A +++ M + G P+V Y+ ++NG CK G+++EA + F
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 335 MKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGK 394
+ L +++ Y++LI+ +AGRVDEA L +EM E+GC D +N ++ + K
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 395 IEEALGMLEKL-WYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSN 453
++EA+ + +++ +G +Y I+L+ ++ E+A++L +M+ +G P A
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFR 542
Query: 454 ELLVRLCKAGMAEDAAIALFGLVEMG 479
L LC +G A L L MG
Sbjct: 543 ALSTGLCLSGKVARACKILDELAPMG 568
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 8/301 (2%)
Query: 173 LNLLIESNQV----DLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLKEM 228
++ +++S+++ D+A +F +S + + N + L+ ++ V E+
Sbjct: 119 VSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEI 178
Query: 229 KKSQMSYPNLITYS-TLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
KK +P ++ + LI K G E + ++ +M ++ I P TYN L++G
Sbjct: 179 KK--FEFPMTVSAANALIKSFGKLGMVEELLWVWRKM-KENGIEPTLYTYNFLMNGLVSA 235
Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
VD A+++ E M++ P++ Y T++ G+CK G+ Q+A E +M+ + D I Y
Sbjct: 236 MFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITY 295
Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
T+I + L +EM E+G + F++++GGLC+EGK+ E + E +
Sbjct: 296 MTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIR 355
Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAED 467
G N A Y ++++ + G +E AI LL M+ GF P T + ++ LCK G E+
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 468 A 468
A
Sbjct: 416 A 416
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 199 KPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAI 258
KPN I+ +LI + K G++E A +L M P+++TYS +++GLCKNGR EA+
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK-PDVVTYSVVVNGLCKNGRVEEAL 417
Query: 259 E-----------------------------------LFEEMVSKDQILPDALTYNVLIDG 283
+ LFEEM S+ D+ YN LID
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDA 476
Query: 284 FCRGGKVDRAKKIMEFMKNN-GCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKP 342
F + KVD A + + M+ GC+ V+ YT L++G KE + +EA +++D M + + P
Sbjct: 477 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Query: 343 DTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGML 402
+ L C +G+V A ++L E+ G D ++I LC+ G+I+EA +
Sbjct: 537 TAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLA 595
Query: 403 EKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGF 445
+ + G + +++N + G+ + A++L+ + G+
Sbjct: 596 DGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGY 638
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 218/449 (48%), Gaps = 17/449 (3%)
Query: 76 QCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLN 135
+ A ++ +S + G N T +++ L + K E V L Q+ + +
Sbjct: 217 ELAWGVYQEIS-RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275
Query: 136 LMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQH 195
L+ +S+ L E E+ + + P P + +T +N L + + + A+ +
Sbjct: 276 LISAYSSKGLMEEAFELMNAM-PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA---EM 331
Query: 196 LR--LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGR 253
LR L P++ + L+ CK+G + +V +M+ S+ P+L+ +S+++ ++G
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR-SRDVVPDLVCFSSMMSLFTRSGN 390
Query: 254 FREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYT 313
+A+ F V + ++PD + Y +LI G+CR G + A + M GC +V Y
Sbjct: 391 LDKALMYFNS-VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 314 TLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKER 373
T+++G CK L EA ++F+EM L PD+ T LI+ C+ G + A+EL ++MKE+
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 374 GCKADIVTFNIILGGLCREGKIEEALGMLEKLWYD----GIYLNKASYRIVLNFSCQKGE 429
+ D+VT+N +L G + G I+ A +++W D I SY I++N C KG
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTA----KEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 430 LEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWAL 489
L +A + M+ + P N ++ C++G A D L ++ GF P+ S+
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 490 LVELICRGRKLLFAFELLDELVIKESGTI 518
L+ R + AF L+ ++ ++ G +
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 211/474 (44%), Gaps = 105/474 (22%)
Query: 60 ISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLR 119
+++ IS + + A E+ N + KGF+ TY T+++ L ++ K+E V
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMP-GKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 120 QM----------TY-----ETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKP 164
+M TY E CK +G + K FS+ + V P
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACK--KGDVVETEKVFSDMRSRDVV--------------P 373
Query: 165 SLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEV 224
L S+ ++L S +D A + S + L P+ I+ ILI+ +C++G + A +
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFN-SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 225 LKEMKK------------------------------SQMS----YPNLITYSTLIDGLCK 250
EM + ++M+ +P+ T + LIDG CK
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 251 NGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVF 310
G + A+ELF++M K +I D +TYN L+DGF + G +D AK+I M + P
Sbjct: 493 LGNLQNAMELFQKMKEK-RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 311 NYTTLMNGFCKEGKLQEAKEVFDEM----------------------------KNFLLK- 341
+Y+ L+N C +G L EA V+DEM ++FL K
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 342 ------PDTIGYTTLINCFCRAGRVDEALELLKEMKER--GCKADIVTFNIILGGLCREG 393
PD I Y TLI F R + +A L+K+M+E G D+ T+N IL G CR+
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 394 KIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
+++EA +L K+ G+ ++++Y ++N + L +A + ML RGF P
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKD-QILPDALTYNVLIDGFCRGGKVDRAKKIME 298
+ LI + + REA E F + SK + DA N LI R G V+ A + +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC--NALIGSLVRIGWVELAWGVYQ 224
Query: 299 FMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAG 358
+ +G NV+ ++N CK+GK+++ +++ + PD + Y TLI+ + G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 359 RVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYR 418
++EA EL+ M +G + T+N ++ GLC+ GK E A + ++ G+ + +YR
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 419 IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEM 478
+L +C+KG++ + ++ M R +P + ++ ++G + A + + E
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 479 GFKPESDSWALLVELICRGRKLLFAFELLDELV 511
G P++ + +L++ CR + A L +E++
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 10/295 (3%)
Query: 88 QKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLH- 146
Q+G + TY TIL L + K D + +MT E F + L ++ +C L
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT-ERALFPDSYTLTILID-GHCKLGN 495
Query: 147 -ERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIF 205
+ +E+F K+ R + + +T L+ + +D A+ + P +
Sbjct: 496 LQNAMELFQKMKE-KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA-DMVSKEILPTPISY 553
Query: 206 NILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMV 265
+IL+ C +G L AF V EM + P ++ +++I G C++G + E+M+
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIK-PTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 266 SKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMK--NNGCNPNVFNYTTLMNGFCKEG 323
S + +PD ++YN LI GF R + +A +++ M+ G P+VF Y ++++GFC++
Sbjct: 613 S-EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 324 KLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKAD 378
+++EA+ V +M + PD YT +IN F + EA + EM +RG D
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 205/394 (52%), Gaps = 8/394 (2%)
Query: 122 TYETCKFHEGIFLNLMKHFSNCSLHERVLEMFHKIHPITREKPSLKAISTCLNLLIESNQ 181
TY C + ++ L++ + + + LE+F ++ + PS+ + L +++S +
Sbjct: 115 TYRLCNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGE 173
Query: 182 VDLAQNFLKYSNQHLRLK--PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLI 239
+FLK + L+ K P+ FNILI C G+ E + ++++M+KS + P ++
Sbjct: 174 DVSVWSFLK---EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA-PTIV 229
Query: 240 TYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEF 299
TY+T++ CK GRF+ AIEL + M SK + D TYN+LI CR ++ + ++
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288
Query: 300 MKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGR 359
M+ +PN Y TL+NGF EGK+ A ++ +EM +F L P+ + + LI+ G
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 360 VDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRI 419
EAL++ M+ +G V++ ++L GLC+ + + A G ++ +G+ + + +Y
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 420 VLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMG 479
+++ C+ G L++A+ LL M G P T + L+ CK G + A + + +G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 480 FKPESDSWALLVELICRGRKLLFAFELLDELVIK 513
P ++ L+ CR L A + + ++++
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 203/434 (46%), Gaps = 22/434 (5%)
Query: 87 EQKGFNHNNATYATILDKLARYKKFEAVDAVLRQM-----TYETCKFHEGIFLNLMKHFS 141
E+ G+ TY T+L + +F+A +L M + C + N++ H
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY------NMLIH-- 271
Query: 142 NCSLHERVLEMFHKIHPITRE--KPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLR-- 197
+ R+ + + + + + P+ +T +N +V +A L N+ L
Sbjct: 272 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL---NEMLSFG 328
Query: 198 LKPNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREA 257
L PN FN LI H G + A ++ M+ ++ P+ ++Y L+DGLCKN F A
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT-PSEVSYGVLLDGLCKNAEFDLA 387
Query: 258 IELFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMN 317
+ M ++ + +TY +IDG C+ G +D A ++ M +G +P++ Y+ L+N
Sbjct: 388 RGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Query: 318 GFCKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKA 377
GFCK G+ + AKE+ + L P+ I Y+TLI CR G + EA+ + + M G
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 378 DIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELL 437
D TFN+++ LC+ GK+ EA + + DGI N S+ ++N GE KA +
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 438 RLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRG 497
M G P + T LL LCK G +A L L + ++ + L+ +C+
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 498 RKLLFAFELLDELV 511
L A L E+V
Sbjct: 627 GNLAKAVSLFGEMV 640
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 179/376 (47%), Gaps = 16/376 (4%)
Query: 94 NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMK-HFSNCSLHERVLEM 152
N TY T+++ + K +L +M + F L+ H S + E L+M
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE-ALKM 355
Query: 153 FHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPN-TCIFNI---- 207
F+ + PS + L+ L ++ + DLA+ F ++R+K N C+ I
Sbjct: 356 FYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGF------YMRMKRNGVCVGRITYTG 408
Query: 208 LIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSK 267
+I CK G L+ A +L EM K + P+++TYS LI+G CK GRF+ A E+ + +
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGID-PDIVTYSALINGFCKVGRFKTAKEIVCR-IYR 466
Query: 268 DQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQE 327
+ P+ + Y+ LI CR G + A +I E M G + F + L+ CK GK+ E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 328 AKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILG 387
A+E M + + P+T+ + LIN + +G +A + EM + G T+ +L
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 388 GLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLP 447
GLC+ G + EA L+ L ++ Y +L C+ G L KA+ L M+ R LP
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Query: 448 HYATSNELLVRLCKAG 463
T L+ LC+ G
Sbjct: 647 DSYTYTSLISGLCRKG 662
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 198/423 (46%), Gaps = 3/423 (0%)
Query: 89 KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148
+G ++ T+ ++ L + K + +R MT + + F L+ + N +
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 149 VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208
+F ++ + P+ + L L + + A+ FLK S + +T ++N L
Sbjct: 562 AFSVFDEMTKVGHH-PTFFTYGSLLKGLCKGGHLREAEKFLK-SLHAVPAAVDTVMYNTL 619
Query: 209 IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268
+ CK G L A + EM + + P+ TY++LI GLC+ G+ AI +E ++
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSI-LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 269 QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328
+LP+ + Y +DG + G+ E M N G P++ +++G+ + GK+++
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 329 KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388
++ EM N P+ Y L++ + + V + L + + G D +T + ++ G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 389 LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448
+C +E L +L+ G+ +++ ++ ++++ C GE+ A +L+++M G
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 449 YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508
T + ++ L + +++ + L + + G PES + L+ +CR + AF + +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918
Query: 509 ELV 511
E++
Sbjct: 919 EMI 921
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 11/290 (3%)
Query: 171 TCLNLLI---ESNQVDLAQNFLK-YSNQHLRLKPNTCIFNILIKHHCKRGTLESAFEVLK 226
TC +L++ ESN +++ LK + + + + T FN+LI C G + AF+++K
Sbjct: 791 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT--FNMLISKCCANGEINWAFDLVK 848
Query: 227 EMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCR 286
M +S T ++ L +N RF+E+ + EM SK I P++ Y LI+G CR
Sbjct: 849 VMTSLGISLDK-DTCDAMVSVLNRNHRFQESRMVLHEM-SKQGISPESRKYIGLINGLCR 906
Query: 287 GGKVDRAKKIMEFM-KNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTI 345
G + A + E M + C PNV + ++ K GK EA + M L P
Sbjct: 907 VGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965
Query: 346 GYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKL 405
+TTL++ C+ G V EALEL M G K D+V++N+++ GLC +G + A + E++
Sbjct: 966 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Query: 406 WYDGIYLNKASYR-IVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNE 454
DG N +Y+ ++ ++ A +L+ +L RGF+ + S +
Sbjct: 1026 KGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQD 1075
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 2/311 (0%)
Query: 200 PNTCIFNILIKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIE 259
P+ N +I + + G +E ++L EM +Q PNL TY+ L+ G K +
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMG-NQNGGPNLTTYNILLHGYSKRKDVSTSFL 775
Query: 260 LFEEMVSKDQILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGF 319
L+ ++ + ILPD LT + L+ G C ++ KI++ G + + + L++
Sbjct: 776 LYRSII-LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834
Query: 320 CKEGKLQEAKEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADI 379
C G++ A ++ M + + D +++ R R E+ +L EM ++G +
Sbjct: 835 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894
Query: 380 VTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRL 439
+ ++ GLCR G I+ A + E++ I + ++ + G+ ++A LLR
Sbjct: 895 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954
Query: 440 MLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRK 499
ML +P A+ L+ CK G +A + G K + S+ +L+ +C
Sbjct: 955 MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014
Query: 500 LLFAFELLDEL 510
+ AFEL +E+
Sbjct: 1015 MALAFELYEEM 1025
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 8/315 (2%)
Query: 171 TCLNLLIE--SNQVDLAQNFLKYSNQHLR-LKPNTCIFNILIKHHCKRGTLESAFEVLKE 227
T N+L+ S + D++ +FL Y + L + P+ + L+ C+ LE ++LK
Sbjct: 755 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 814
Query: 228 MKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCRG 287
+ T++ LI C NG A +L + M S I D T + ++ R
Sbjct: 815 FICRGVEVDRY-TFNMLISKCCANGEINWAFDLVKVMTSLG-ISLDKDTCDAMVSVLNRN 872
Query: 288 GKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFLLKPDTIGY 347
+ ++ ++ M G +P Y L+NG C+ G ++ A V +EM + P +
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 348 TTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGGLCREGKIEEALGMLEKLWY 407
+ ++ + G+ DEA LL+ M + I +F ++ C+ G + EAL + +
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 408 DGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVR--LCKAGMA 465
G+ L+ SY +++ C KG++ A EL M GFL + AT+ + L+R L +
Sbjct: 993 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN-ATTYKALIRGLLARETAF 1051
Query: 466 EDAAIALFGLVEMGF 480
A I L L+ GF
Sbjct: 1052 SGADIILKDLLARGF 1066
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,743,878
Number of Sequences: 539616
Number of extensions: 7680572
Number of successful extensions: 30561
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 19738
Number of HSP's gapped (non-prelim): 2929
length of query: 521
length of database: 191,569,459
effective HSP length: 122
effective length of query: 399
effective length of database: 125,736,307
effective search space: 50168786493
effective search space used: 50168786493
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)