Query 009978
Match_columns 521
No_of_seqs 648 out of 2885
Neff 10.8
Searched_HMMs 46136
Date Thu Mar 28 19:35:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009978.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009978hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 2.2E-42 4.8E-47 317.0 29.2 409 91-511 21-436 (448)
2 COG2814 AraJ Arabinose efflux 100.0 2.1E-40 4.5E-45 309.2 40.6 382 95-514 9-391 (394)
3 PRK03545 putative arabinose tr 100.0 3.5E-39 7.6E-44 317.1 43.0 383 96-518 6-389 (390)
4 PRK09556 uhpT sugar phosphate 100.0 6.4E-40 1.4E-44 329.3 35.1 402 94-509 24-449 (467)
5 TIGR00894 2A0114euk Na(+)-depe 100.0 1.7E-38 3.7E-43 319.6 41.4 418 93-516 13-457 (465)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.2E-38 2.5E-43 314.5 38.7 393 95-498 4-410 (412)
7 PRK11663 regulatory protein Uh 100.0 2.5E-38 5.4E-43 314.7 39.8 408 95-514 19-429 (434)
8 KOG2532 Permease of the major 100.0 3.3E-38 7.1E-43 308.0 38.4 386 127-518 66-456 (466)
9 PRK11551 putative 3-hydroxyphe 100.0 1.4E-36 3E-41 300.8 42.3 383 95-510 11-397 (406)
10 TIGR00893 2A0114 d-galactonate 100.0 6.8E-37 1.5E-41 302.4 39.5 394 108-507 3-397 (399)
11 TIGR01299 synapt_SV2 synaptic 100.0 1.4E-36 3E-41 311.6 42.5 406 94-513 162-738 (742)
12 PRK11273 glpT sn-glycerol-3-ph 100.0 2.6E-36 5.7E-41 301.8 41.3 411 93-514 23-440 (452)
13 TIGR00903 2A0129 major facilit 100.0 2E-36 4.3E-41 292.2 38.3 360 111-507 3-363 (368)
14 PRK10213 nepI ribonucleoside t 100.0 1.4E-35 2.9E-40 290.9 44.8 368 97-503 18-385 (394)
15 PLN00028 nitrate transmembrane 100.0 6E-36 1.3E-40 300.1 42.1 392 97-510 34-434 (476)
16 PRK09705 cynX putative cyanate 100.0 4.9E-36 1.1E-40 294.3 39.9 357 116-513 26-385 (393)
17 PRK03699 putative transporter; 100.0 1.9E-35 4.1E-40 290.8 41.2 377 96-510 4-381 (394)
18 PRK15034 nitrate/nitrite trans 100.0 4.5E-35 9.7E-40 283.9 42.2 383 93-513 28-458 (462)
19 COG2223 NarK Nitrate/nitrite t 100.0 3.9E-36 8.6E-41 276.7 32.1 386 94-512 9-404 (417)
20 PRK14995 methyl viologen resis 100.0 7.8E-35 1.7E-39 294.1 44.4 374 97-482 4-412 (495)
21 PRK10406 alpha-ketoglutarate t 100.0 7.8E-35 1.7E-39 289.7 42.6 378 96-509 19-424 (432)
22 PRK15402 multidrug efflux syst 100.0 1E-34 2.2E-39 287.2 42.5 365 94-490 8-377 (406)
23 TIGR00890 2A0111 Oxalate/Forma 100.0 1.5E-35 3.3E-40 290.7 35.8 365 104-502 8-375 (377)
24 PRK10091 MFS transport protein 100.0 7.2E-35 1.6E-39 285.4 40.0 373 101-513 5-380 (382)
25 PRK10642 proline/glycine betai 100.0 1.6E-34 3.6E-39 291.5 43.3 392 98-511 15-432 (490)
26 PRK12307 putative sialic acid 100.0 9.5E-35 2.1E-39 289.6 39.9 369 95-489 14-388 (426)
27 TIGR00891 2A0112 putative sial 100.0 7.9E-35 1.7E-39 288.5 38.1 388 93-493 6-400 (405)
28 TIGR00892 2A0113 monocarboxyla 100.0 4.1E-35 9E-40 292.6 32.7 397 95-504 15-416 (455)
29 PRK05122 major facilitator sup 100.0 1.1E-33 2.4E-38 279.2 41.2 373 99-516 15-396 (399)
30 TIGR00897 2A0118 polyol permea 100.0 2E-33 4.3E-38 277.0 41.3 377 103-509 17-401 (402)
31 PRK09952 shikimate transporter 100.0 5.5E-33 1.2E-37 276.4 43.6 385 95-510 18-434 (438)
32 TIGR00712 glpT glycerol-3-phos 100.0 5.6E-34 1.2E-38 284.0 35.8 403 97-512 25-436 (438)
33 TIGR00710 efflux_Bcr_CflA drug 100.0 2.6E-33 5.6E-38 275.7 39.6 353 100-483 6-361 (385)
34 TIGR00899 2A0120 sugar efflux 100.0 3.2E-33 6.8E-38 274.0 40.0 365 107-508 5-373 (375)
35 PRK10504 putative transporter; 100.0 6.8E-33 1.5E-37 279.6 43.0 373 100-485 11-417 (471)
36 TIGR00881 2A0104 phosphoglycer 100.0 1.2E-34 2.5E-39 284.6 28.9 372 107-490 3-378 (379)
37 PRK10133 L-fucose transporter; 100.0 9.9E-33 2.1E-37 273.4 42.4 370 97-500 24-424 (438)
38 PRK10489 enterobactin exporter 100.0 5.3E-34 1.2E-38 282.9 33.3 377 107-515 25-406 (417)
39 TIGR00900 2A0121 H+ Antiporter 100.0 5.2E-33 1.1E-37 271.4 39.7 353 105-485 5-365 (365)
40 PRK15075 citrate-proton sympor 100.0 1.4E-32 3E-37 273.7 42.0 356 97-485 13-396 (434)
41 PRK03633 putative MFS family t 100.0 1.8E-32 4E-37 268.4 41.9 361 101-506 8-369 (381)
42 TIGR00879 SP MFS transporter, 100.0 7.5E-34 1.6E-38 288.0 32.9 401 98-510 27-471 (481)
43 TIGR00711 efflux_EmrB drug res 100.0 4.3E-33 9.2E-38 282.7 37.3 372 100-483 3-410 (485)
44 PRK15403 multidrug efflux syst 100.0 2E-32 4.4E-37 270.0 40.8 369 101-498 18-386 (413)
45 TIGR00887 2A0109 phosphate:H+ 100.0 1.4E-32 3E-37 278.6 40.0 412 94-518 11-498 (502)
46 PRK03893 putative sialic acid 100.0 2.7E-32 5.9E-37 277.4 40.8 385 95-500 16-444 (496)
47 PRK11652 emrD multidrug resist 100.0 9.5E-32 2.1E-36 265.0 42.3 353 97-483 6-360 (394)
48 PRK09874 drug efflux system pr 100.0 7E-32 1.5E-36 267.5 40.3 372 103-510 18-399 (408)
49 PRK12382 putative transporter; 100.0 7.2E-32 1.6E-36 265.6 40.0 365 101-509 17-389 (392)
50 PRK10077 xylE D-xylose transpo 100.0 3.4E-32 7.5E-37 275.5 38.6 396 95-508 8-456 (479)
51 PRK11043 putative transporter; 100.0 2E-31 4.3E-36 263.3 42.7 350 101-485 8-359 (401)
52 PRK11102 bicyclomycin/multidru 100.0 7.4E-32 1.6E-36 264.4 39.2 365 113-509 5-372 (377)
53 PRK10473 multidrug efflux syst 100.0 1.9E-31 4.2E-36 262.6 41.5 354 104-498 8-363 (392)
54 TIGR00895 2A0115 benzoate tran 100.0 4.1E-32 8.8E-37 268.4 36.5 374 95-480 13-397 (398)
55 PRK11195 lysophospholipid tran 100.0 1.4E-31 3E-36 262.4 39.2 374 104-512 8-383 (393)
56 PF07690 MFS_1: Major Facilita 100.0 4.9E-33 1.1E-37 270.2 28.5 346 105-474 2-352 (352)
57 PRK11646 multidrug resistance 100.0 2.3E-31 4.9E-36 261.6 39.8 362 108-507 19-386 (400)
58 PRK15011 sugar efflux transpor 100.0 9.6E-31 2.1E-35 257.1 42.5 362 108-509 24-391 (393)
59 TIGR00902 2A0127 phenyl propri 100.0 4E-31 8.6E-36 258.8 39.5 361 104-504 9-374 (382)
60 PRK11010 ampG muropeptide tran 100.0 1.2E-30 2.7E-35 262.1 42.6 379 101-510 14-404 (491)
61 TIGR00898 2A0119 cation transp 100.0 6.1E-32 1.3E-36 275.2 33.5 377 120-518 110-504 (505)
62 cd06174 MFS The Major Facilita 100.0 5.9E-31 1.3E-35 255.4 37.4 346 104-507 4-350 (352)
63 TIGR00885 fucP L-fucose:H+ sym 100.0 1.4E-30 2.9E-35 255.9 39.8 365 101-499 5-402 (410)
64 TIGR00886 2A0108 nitrite extru 100.0 9.3E-32 2E-36 262.7 31.5 346 103-469 5-365 (366)
65 PRK10054 putative transporter; 100.0 5E-31 1.1E-35 258.7 36.0 376 105-520 13-393 (395)
66 KOG2504 Monocarboxylate transp 100.0 6.8E-32 1.5E-36 267.1 29.0 405 93-509 40-476 (509)
67 KOG1330 Sugar transporter/spin 100.0 6.5E-33 1.4E-37 257.2 19.0 380 94-488 28-417 (493)
68 PRK11128 putative 3-phenylprop 100.0 7.2E-30 1.6E-34 250.1 39.5 357 108-504 13-374 (382)
69 KOG2533 Permease of the major 100.0 4.8E-31 1E-35 258.1 29.9 293 92-388 38-337 (495)
70 TIGR00896 CynX cyanate transpo 100.0 1.4E-30 2.9E-35 253.0 32.8 333 116-488 17-353 (355)
71 PF05977 MFS_3: Transmembrane 100.0 8.2E-30 1.8E-34 253.6 38.6 379 101-509 12-394 (524)
72 PRK11902 ampG muropeptide tran 100.0 6.1E-29 1.3E-33 245.2 41.4 376 105-511 5-392 (402)
73 TIGR00883 2A0106 metabolite-pr 100.0 1.3E-29 2.8E-34 250.2 34.7 358 109-498 3-390 (394)
74 COG0738 FucP Fucose permease [ 100.0 1.4E-28 2.9E-33 225.3 35.8 376 99-509 13-409 (422)
75 PRK09528 lacY galactoside perm 100.0 3.2E-29 7E-34 248.8 34.7 377 106-511 17-405 (420)
76 TIGR00882 2A0105 oligosacchari 100.0 5.1E-28 1.1E-32 238.4 38.6 375 103-506 6-392 (396)
77 COG2807 CynX Cyanate permease 100.0 1E-27 2.2E-32 216.1 35.9 360 113-513 26-389 (395)
78 KOG3764 Vesicular amine transp 100.0 1.3E-29 2.8E-34 230.1 22.8 349 126-509 98-454 (464)
79 TIGR00889 2A0110 nucleoside tr 100.0 1E-27 2.3E-32 236.5 37.0 368 104-510 7-403 (418)
80 PRK06814 acylglycerophosphoeth 100.0 2.3E-28 5E-33 272.1 35.8 370 105-501 21-414 (1140)
81 TIGR00924 yjdL_sub1_fam amino 100.0 2.1E-26 4.5E-31 230.4 40.3 404 101-509 12-468 (475)
82 PRK08633 2-acyl-glycerophospho 100.0 3.8E-27 8.3E-32 263.4 37.6 356 117-498 28-399 (1146)
83 TIGR02718 sider_RhtX_FptX side 100.0 4.2E-26 9E-31 224.3 40.2 369 101-504 3-386 (390)
84 TIGR00805 oat sodium-independe 100.0 1.4E-28 2.9E-33 252.6 23.1 289 102-390 36-397 (633)
85 TIGR00901 2A0125 AmpG-related 100.0 2.9E-27 6.4E-32 229.8 31.1 320 116-467 5-355 (356)
86 PRK10207 dipeptide/tripeptide 100.0 1.2E-25 2.6E-30 224.8 40.7 399 100-507 15-474 (489)
87 TIGR00792 gph sugar (Glycoside 100.0 8.1E-27 1.8E-31 233.4 31.3 336 120-485 21-382 (437)
88 TIGR00806 rfc RFC reduced fola 100.0 4E-26 8.7E-31 216.7 33.9 380 113-503 40-442 (511)
89 KOG0253 Synaptic vesicle trans 100.0 2.2E-26 4.7E-31 206.3 28.7 401 93-510 72-520 (528)
90 KOG0569 Permease of the major 100.0 8.2E-26 1.8E-30 218.1 35.0 366 136-514 62-460 (485)
91 KOG2615 Permease of the major 100.0 1.7E-26 3.7E-31 208.5 24.1 358 125-501 59-432 (451)
92 KOG0254 Predicted transporter 100.0 1.4E-25 3E-30 227.4 33.2 403 100-517 46-492 (513)
93 PTZ00207 hypothetical protein; 99.9 6.1E-24 1.3E-28 212.1 39.6 409 94-507 23-550 (591)
94 PF03825 Nuc_H_symport: Nucleo 99.9 1.8E-23 3.9E-28 202.5 38.8 373 105-511 8-397 (400)
95 PF06609 TRI12: Fungal trichot 99.9 8.4E-24 1.8E-28 209.5 35.8 365 104-481 49-465 (599)
96 KOG0252 Inorganic phosphate tr 99.9 1.5E-26 3.3E-31 213.9 14.9 414 92-517 34-506 (538)
97 PF01306 LacY_symp: LacY proto 99.9 3E-23 6.5E-28 196.6 36.6 379 104-511 12-402 (412)
98 KOG4686 Predicted sugar transp 99.9 6.3E-26 1.4E-30 196.1 15.7 391 95-514 40-448 (459)
99 PRK09584 tppB putative tripept 99.9 5.4E-23 1.2E-27 207.0 37.7 394 103-505 25-475 (500)
100 KOG0255 Synaptic vesicle trans 99.9 1.3E-23 2.7E-28 214.5 31.5 367 126-513 110-497 (521)
101 TIGR01301 GPH_sucrose GPH fami 99.9 4.7E-22 1E-26 194.7 39.0 379 108-509 13-471 (477)
102 PF11700 ATG22: Vacuole efflux 99.9 2.3E-21 4.9E-26 191.4 42.9 360 134-514 70-473 (477)
103 PRK09669 putative symporter Ya 99.9 5.2E-22 1.1E-26 198.4 34.0 335 120-485 31-390 (444)
104 PRK15462 dipeptide/tripeptide 99.9 1.5E-20 3.2E-25 185.0 39.9 393 101-501 11-469 (493)
105 KOG2563 Permease of the major 99.9 5.8E-22 1.2E-26 184.1 26.2 392 91-509 37-450 (480)
106 TIGR00788 fbt folate/biopterin 99.9 5.5E-22 1.2E-26 198.0 26.1 367 99-485 26-415 (468)
107 TIGR01272 gluP glucose/galacto 99.9 6.9E-21 1.5E-25 179.5 30.7 277 187-496 8-302 (310)
108 PF00083 Sugar_tr: Sugar (and 99.9 2.9E-28 6.2E-33 244.8 -22.1 398 105-518 6-446 (451)
109 PRK09848 glucuronide transport 99.9 2.2E-20 4.7E-25 187.1 33.5 346 107-485 16-390 (448)
110 PRK10429 melibiose:sodium symp 99.9 2E-20 4.4E-25 188.1 32.9 354 106-485 13-395 (473)
111 PF13347 MFS_2: MFS/sugar tran 99.9 7.3E-21 1.6E-25 189.2 28.1 337 120-485 23-386 (428)
112 COG2270 Permeases of the major 99.9 1.9E-19 4.1E-24 166.7 29.1 355 133-511 57-431 (438)
113 PRK11462 putative transporter; 99.9 1.7E-18 3.7E-23 172.9 38.3 333 121-485 32-389 (460)
114 COG2211 MelB Na+/melibiose sym 99.9 4.2E-18 9.1E-23 163.2 33.5 354 106-485 19-398 (467)
115 PF03209 PUCC: PUCC protein; 99.8 9E-18 2E-22 156.3 33.4 357 125-510 6-399 (403)
116 COG3104 PTR2 Dipeptide/tripept 99.8 4.2E-18 9.1E-23 161.6 30.6 403 101-508 23-486 (498)
117 KOG3626 Organic anion transpor 99.8 2.3E-18 5E-23 171.9 22.8 292 99-390 97-459 (735)
118 KOG2325 Predicted transporter/ 99.8 3.3E-18 7.1E-23 164.2 21.8 393 95-509 30-475 (488)
119 PF03137 OATP: Organic Anion T 99.8 2.1E-20 4.5E-25 187.1 -0.2 380 103-485 7-516 (539)
120 KOG2816 Predicted transporter 99.7 6.2E-16 1.3E-20 151.0 25.7 364 98-484 21-393 (463)
121 PF05631 DUF791: Protein of un 99.7 5.9E-15 1.3E-19 135.5 26.0 263 95-386 34-304 (354)
122 PF03092 BT1: BT1 family; Int 99.7 3.6E-15 7.8E-20 147.0 20.1 375 118-513 9-417 (433)
123 TIGR00889 2A0110 nucleoside tr 99.6 1E-14 2.3E-19 144.1 18.3 161 119-279 228-405 (418)
124 TIGR00880 2_A_01_02 Multidrug 99.6 3.2E-15 6.9E-20 124.1 12.2 136 140-277 4-139 (141)
125 PRK05122 major facilitator sup 99.6 8.2E-14 1.8E-18 137.7 22.0 159 118-280 235-393 (399)
126 TIGR00890 2A0111 Oxalate/Forma 99.6 2.1E-14 4.7E-19 140.6 16.4 151 118-268 224-374 (377)
127 PRK09528 lacY galactoside perm 99.6 2.3E-14 5.1E-19 142.4 15.4 150 128-279 256-406 (420)
128 PRK11551 putative 3-hydroxyphe 99.6 1.7E-13 3.8E-18 135.7 19.5 157 117-275 238-395 (406)
129 PF01770 Folate_carrier: Reduc 99.6 3.5E-11 7.6E-16 114.1 33.6 343 119-472 24-391 (412)
130 PRK15011 sugar efflux transpor 99.6 3.2E-13 7E-18 132.9 20.6 155 118-275 235-390 (393)
131 TIGR00902 2A0127 phenyl propri 99.6 3.3E-13 7.1E-18 132.3 20.5 155 113-271 219-374 (382)
132 PRK12382 putative transporter; 99.6 4.1E-13 8.9E-18 132.3 20.4 154 118-275 235-388 (392)
133 PRK10642 proline/glycine betai 99.5 9.4E-13 2E-17 133.4 23.1 169 113-282 264-435 (490)
134 TIGR01299 synapt_SV2 synaptic 99.5 4.7E-13 1E-17 138.7 20.9 138 138-279 599-736 (742)
135 PRK09874 drug efflux system pr 99.5 1.5E-13 3.4E-18 136.2 16.4 158 117-276 237-398 (408)
136 PRK10489 enterobactin exporter 99.5 3.2E-13 6.9E-18 134.2 18.6 161 118-280 242-403 (417)
137 cd06174 MFS The Major Facilita 99.5 4.3E-13 9.2E-18 130.0 19.0 164 108-273 184-349 (352)
138 PRK09556 uhpT sugar phosphate 99.5 4.3E-13 9.3E-18 135.1 18.2 174 102-275 261-448 (467)
139 TIGR00899 2A0120 sugar efflux 99.5 8.5E-13 1.8E-17 129.3 19.5 151 121-274 221-372 (375)
140 PRK03633 putative MFS family t 99.5 1.4E-12 3.1E-17 127.8 21.0 150 120-274 221-370 (381)
141 PRK03545 putative arabinose tr 99.5 1.5E-12 3.3E-17 128.1 20.3 152 122-277 229-381 (390)
142 TIGR00892 2A0113 monocarboxyla 99.5 4.5E-13 9.8E-18 134.2 16.0 157 112-270 254-415 (455)
143 TIGR00893 2A0114 d-galactonate 99.5 1.3E-12 2.9E-17 128.8 19.1 166 105-273 221-396 (399)
144 PRK09705 cynX putative cyanate 99.5 3E-12 6.5E-17 125.9 21.4 166 113-281 219-386 (393)
145 PRK10054 putative transporter; 99.5 2.6E-12 5.6E-17 126.3 20.6 172 324-506 7-179 (395)
146 PRK03893 putative sialic acid 99.5 6.3E-13 1.4E-17 135.4 16.3 150 118-267 294-444 (496)
147 PRK03699 putative transporter; 99.5 1.7E-12 3.6E-17 128.0 18.3 163 109-274 215-378 (394)
148 TIGR00883 2A0106 metabolite-pr 99.5 7.3E-13 1.6E-17 130.6 14.4 161 106-266 226-391 (394)
149 PRK11663 regulatory protein Uh 99.5 4.7E-12 1E-16 126.3 20.0 171 108-278 252-426 (434)
150 TIGR00897 2A0118 polyol permea 99.5 4.4E-12 9.6E-17 125.2 19.4 165 109-275 232-400 (402)
151 PRK11128 putative 3-phenylprop 99.4 8.2E-12 1.8E-16 122.5 20.4 149 118-270 224-373 (382)
152 TIGR00879 SP MFS transporter, 99.4 3.1E-12 6.8E-17 129.6 17.9 181 99-279 284-473 (481)
153 PRK11273 glpT sn-glycerol-3-ph 99.4 3.8E-12 8.2E-17 127.7 18.0 164 112-275 266-434 (452)
154 PRK11010 ampG muropeptide tran 99.4 1.2E-10 2.6E-15 117.7 28.3 155 121-276 245-403 (491)
155 TIGR00769 AAA ADP/ATP carrier 99.4 5.9E-09 1.3E-13 102.2 38.9 275 99-390 7-333 (472)
156 KOG3762 Predicted transporter 99.4 1.9E-11 4E-16 116.8 20.6 183 316-509 363-547 (618)
157 TIGR00891 2A0112 putative sial 99.4 3.1E-12 6.7E-17 126.7 14.8 140 120-261 259-401 (405)
158 TIGR00924 yjdL_sub1_fam amino 99.4 1.7E-11 3.6E-16 123.2 19.9 175 325-509 11-192 (475)
159 COG2814 AraJ Arabinose efflux 99.4 2E-11 4.3E-16 115.2 19.0 165 109-276 222-386 (394)
160 PRK12307 putative sialic acid 99.4 9.6E-12 2.1E-16 124.1 17.8 143 118-260 250-392 (426)
161 COG2271 UhpC Sugar phosphate p 99.4 5.1E-12 1.1E-16 117.7 14.4 178 325-513 30-210 (448)
162 PRK11646 multidrug resistance 99.4 3.4E-11 7.4E-16 118.6 21.1 169 327-506 13-182 (400)
163 TIGR00900 2A0121 H+ Antiporter 99.4 2.8E-11 6E-16 118.0 19.3 170 328-508 3-178 (365)
164 PF05977 MFS_3: Transmembrane 99.4 2.2E-11 4.8E-16 122.1 18.7 155 117-273 236-391 (524)
165 TIGR00895 2A0115 benzoate tran 99.4 6.9E-12 1.5E-16 123.8 14.6 140 107-248 258-397 (398)
166 PRK15462 dipeptide/tripeptide 99.4 3.8E-11 8.3E-16 118.8 19.5 175 324-508 9-188 (493)
167 TIGR00882 2A0105 oligosacchari 99.4 1.8E-11 4E-16 120.7 17.3 142 130-273 250-392 (396)
168 PRK10077 xylE D-xylose transpo 99.4 4.4E-11 9.6E-16 121.3 20.5 164 117-280 289-461 (479)
169 TIGR02718 sider_RhtX_FptX side 99.4 3E-11 6.4E-16 119.0 18.1 150 121-270 230-385 (390)
170 PRK09952 shikimate transporter 99.4 5.2E-11 1.1E-15 118.8 19.9 156 120-275 271-432 (438)
171 PRK09584 tppB putative tripept 99.4 1.2E-10 2.7E-15 117.6 21.9 178 319-506 15-198 (500)
172 PRK10504 putative transporter; 99.3 9.9E-11 2.1E-15 118.4 21.3 174 324-508 10-184 (471)
173 PF11700 ATG22: Vacuole efflux 99.3 7E-11 1.5E-15 117.2 19.6 178 98-275 280-467 (477)
174 PF07690 MFS_1: Major Facilita 99.3 4.5E-11 9.7E-16 116.0 17.7 165 330-504 2-167 (352)
175 KOG2504 Monocarboxylate transp 99.3 1.5E-11 3.3E-16 122.6 14.2 175 99-275 298-475 (509)
176 TIGR00710 efflux_Bcr_CflA drug 99.3 8.4E-11 1.8E-15 115.6 19.3 167 331-508 12-179 (385)
177 PRK10091 MFS transport protein 99.3 1.2E-10 2.5E-15 114.3 20.0 172 324-506 3-175 (382)
178 PF06813 Nodulin-like: Nodulin 99.3 4.2E-10 9.1E-15 100.6 21.2 175 98-275 2-181 (250)
179 TIGR00712 glpT glycerol-3-phos 99.3 5.1E-11 1.1E-15 119.1 17.0 163 117-279 269-436 (438)
180 PRK10213 nepI ribonucleoside t 99.3 2E-10 4.4E-15 112.9 21.0 156 339-505 35-191 (394)
181 PF01306 LacY_symp: LacY proto 99.3 1.5E-10 3.3E-15 110.5 19.2 161 118-280 243-404 (412)
182 TIGR00887 2A0109 phosphate:H+ 99.3 2.8E-11 6E-16 123.1 15.2 163 117-280 306-492 (502)
183 TIGR00926 2A1704 Peptide:H+ sy 99.3 4.7E-09 1E-13 107.8 30.9 158 119-276 8-182 (654)
184 TIGR01272 gluP glucose/galacto 99.3 2.5E-10 5.4E-15 107.9 20.2 159 101-264 142-303 (310)
185 TIGR00792 gph sugar (Glycoside 99.3 4.7E-11 1E-15 119.6 16.0 133 121-255 244-384 (437)
186 PRK14995 methyl viologen resis 99.3 3.3E-10 7.2E-15 114.9 22.3 173 326-509 8-182 (495)
187 PRK10473 multidrug efflux syst 99.3 3.7E-10 8E-15 111.3 21.6 172 325-507 4-176 (392)
188 PF06963 FPN1: Ferroportin1 (F 99.3 3.8E-09 8.2E-14 102.4 27.6 371 101-476 4-411 (432)
189 PRK15075 citrate-proton sympor 99.3 1.8E-10 4E-15 114.9 19.3 145 111-255 250-398 (434)
190 TIGR00711 efflux_EmrB drug res 99.3 1.9E-10 4.1E-15 116.9 19.8 171 327-508 5-176 (485)
191 PRK15402 multidrug efflux syst 99.3 1.7E-10 3.7E-15 114.3 18.5 156 119-275 235-394 (406)
192 TIGR00903 2A0129 major facilit 99.3 2.7E-10 5.9E-15 110.4 19.5 159 338-508 5-164 (368)
193 PRK11043 putative transporter; 99.3 4E-10 8.6E-15 111.5 21.0 165 336-510 15-182 (401)
194 TIGR00881 2A0104 phosphoglycer 99.3 7.2E-11 1.6E-15 115.7 15.5 151 108-258 225-379 (379)
195 TIGR00886 2A0108 nitrite extru 99.3 3.4E-10 7.3E-15 110.5 19.9 148 325-482 2-151 (366)
196 TIGR02332 HpaX 4-hydroxyphenyl 99.3 5.5E-10 1.2E-14 110.5 20.9 169 328-507 12-187 (412)
197 PRK10207 dipeptide/tripeptide 99.3 4.9E-10 1.1E-14 112.7 19.9 175 324-508 14-193 (489)
198 PRK11902 ampG muropeptide tran 99.3 4E-10 8.7E-15 111.4 18.8 149 122-275 233-389 (402)
199 TIGR00898 2A0119 cation transp 99.2 9.4E-11 2E-15 119.7 14.6 149 125-279 349-497 (505)
200 PLN00028 nitrate transmembrane 99.2 1.3E-09 2.8E-14 109.9 22.3 161 337-510 49-220 (476)
201 PRK11102 bicyclomycin/multidru 99.2 4.3E-10 9.3E-15 110.3 18.4 158 339-507 6-164 (377)
202 PRK11195 lysophospholipid tran 99.2 6.1E-10 1.3E-14 109.5 19.3 172 323-509 2-174 (393)
203 PF03825 Nuc_H_symport: Nucleo 99.2 7.3E-10 1.6E-14 107.9 19.5 168 110-278 218-397 (400)
204 PRK10406 alpha-ketoglutarate t 99.2 8.5E-10 1.8E-14 110.1 19.8 157 117-274 261-422 (432)
205 COG2223 NarK Nitrate/nitrite t 99.2 3.1E-10 6.7E-15 106.1 14.7 174 101-275 220-400 (417)
206 PRK11652 emrD multidrug resist 99.2 1.3E-09 2.9E-14 107.5 20.3 166 328-504 12-178 (394)
207 KOG3098 Uncharacterized conser 99.2 2.6E-08 5.7E-13 96.4 28.3 316 140-480 56-411 (461)
208 TIGR00896 CynX cyanate transpo 99.2 6.4E-10 1.4E-14 108.0 17.6 135 116-253 214-350 (355)
209 PRK15403 multidrug efflux syst 99.2 1.9E-09 4.1E-14 106.7 20.8 157 339-506 31-188 (413)
210 PRK09848 glucuronide transport 99.2 7.1E-10 1.5E-14 111.2 17.4 138 117-254 246-391 (448)
211 KOG0569 Permease of the major 99.2 6.2E-10 1.3E-14 108.6 15.1 185 98-283 269-461 (485)
212 PF02487 CLN3: CLN3 protein; 99.2 5.8E-08 1.3E-12 92.4 27.8 324 137-480 62-394 (402)
213 KOG0637 Sucrose transporter an 99.2 8.4E-10 1.8E-14 103.8 14.9 278 104-391 37-363 (498)
214 KOG3574 Acetyl-CoA transporter 99.2 6.9E-09 1.5E-13 95.0 20.3 362 97-485 29-433 (510)
215 COG2270 Permeases of the major 99.2 7.2E-10 1.6E-14 103.7 14.2 148 122-271 276-424 (438)
216 PRK15034 nitrate/nitrite trans 99.2 3.9E-09 8.4E-14 103.5 19.9 176 324-510 34-233 (462)
217 KOG4332 Predicted sugar transp 99.1 1.3E-09 2.8E-14 94.8 13.8 352 117-504 55-426 (454)
218 TIGR00885 fucP L-fucose:H+ sym 99.1 1.3E-08 2.9E-13 100.4 21.8 170 326-505 5-203 (410)
219 PRK08633 2-acyl-glycerophospho 99.1 1.7E-09 3.6E-14 121.9 17.5 146 119-266 252-400 (1146)
220 PRK10133 L-fucose transporter; 99.1 5E-09 1.1E-13 104.3 18.8 141 126-271 287-428 (438)
221 TIGR00894 2A0114euk Na(+)-depe 99.1 1.7E-09 3.8E-14 109.1 14.9 173 101-275 263-449 (465)
222 TIGR00806 rfc RFC reduced fola 99.1 1.8E-08 3.9E-13 97.2 20.5 159 343-512 44-206 (511)
223 PRK10429 melibiose:sodium symp 99.1 6.2E-09 1.3E-13 105.0 17.8 142 113-254 245-396 (473)
224 KOG3810 Micronutrient transpor 99.1 5.4E-09 1.2E-13 94.5 15.0 351 147-515 55-427 (433)
225 PRK09669 putative symporter Ya 99.0 4.4E-09 9.5E-14 105.4 15.7 134 121-254 251-391 (444)
226 KOG4686 Predicted sugar transp 99.0 7.5E-09 1.6E-13 91.0 14.8 171 98-274 266-441 (459)
227 PF13347 MFS_2: MFS/sugar tran 99.0 4.6E-09 1E-13 104.7 15.7 151 105-255 231-388 (428)
228 TIGR00901 2A0125 AmpG-related 99.0 1.7E-09 3.6E-14 105.2 12.0 123 113-235 223-355 (356)
229 KOG3764 Vesicular amine transp 99.0 1.7E-09 3.6E-14 100.0 10.5 147 355-511 101-249 (464)
230 KOG0253 Synaptic vesicle trans 99.0 3.5E-09 7.5E-14 96.7 11.8 131 143-279 390-522 (528)
231 PRK06814 acylglycerophosphoeth 99.0 2.3E-08 4.9E-13 112.5 21.0 185 319-510 6-196 (1140)
232 TIGR00880 2_A_01_02 Multidrug 99.0 1.2E-08 2.7E-13 84.1 14.0 133 366-508 4-137 (141)
233 COG2807 CynX Cyanate permease 99.0 4.3E-08 9.2E-13 90.0 18.3 162 111-275 220-384 (395)
234 KOG1330 Sugar transporter/spin 99.0 4.5E-10 9.8E-15 106.0 5.2 177 326-512 35-212 (493)
235 PTZ00207 hypothetical protein; 98.9 1.3E-07 2.8E-12 95.6 21.1 157 339-508 42-204 (591)
236 COG0477 ProP Permeases of the 98.9 5.9E-08 1.3E-12 92.0 17.4 157 111-267 14-176 (338)
237 KOG2615 Permease of the major 98.9 1.4E-08 3.1E-13 93.4 12.0 125 357-491 65-193 (451)
238 PF03219 TLC: TLC ATP/ADP tran 98.9 2E-05 4.2E-10 78.2 34.9 281 96-390 21-349 (491)
239 COG3104 PTR2 Dipeptide/tripept 98.9 3.6E-08 7.7E-13 94.7 14.9 182 320-511 16-208 (498)
240 COG2211 MelB Na+/melibiose sym 98.9 1.7E-07 3.7E-12 90.8 19.1 148 107-254 244-399 (467)
241 TIGR01301 GPH_sucrose GPH fami 98.9 1.1E-07 2.3E-12 94.1 17.5 176 326-510 6-219 (477)
242 TIGR00805 oat sodium-independe 98.9 2.8E-08 6.2E-13 103.0 13.8 153 349-510 57-282 (633)
243 PRK11462 putative transporter; 98.9 1.7E-07 3.7E-12 94.0 18.8 134 121-254 250-390 (460)
244 TIGR00788 fbt folate/biopterin 98.8 7E-08 1.5E-12 96.9 14.6 136 127-262 281-429 (468)
245 KOG3762 Predicted transporter 98.8 3.4E-08 7.5E-13 94.9 11.0 152 122-275 394-546 (618)
246 COG0738 FucP Fucose permease [ 98.8 2.9E-07 6.2E-12 86.0 16.3 166 99-269 236-402 (422)
247 COG3202 ATP/ADP translocase [E 98.8 0.00019 4E-09 69.3 35.2 281 95-390 23-352 (509)
248 KOG2532 Permease of the major 98.7 2E-07 4.4E-12 92.1 13.4 175 99-275 258-446 (466)
249 PF13000 Acatn: Acetyl-coenzym 98.7 1.2E-05 2.5E-10 77.5 24.5 374 103-483 4-467 (544)
250 PF06609 TRI12: Fungal trichot 98.7 2.2E-06 4.8E-11 86.3 20.7 151 345-508 65-216 (599)
251 PF03209 PUCC: PUCC protein; 98.7 1.5E-06 3.3E-11 82.0 17.6 157 117-273 226-395 (403)
252 PF06779 DUF1228: Protein of u 98.6 2.7E-07 5.9E-12 66.5 7.3 79 112-192 5-83 (85)
253 PF05978 UNC-93: Ion channel r 98.6 5.8E-06 1.3E-10 68.3 16.0 108 138-248 41-148 (156)
254 KOG1237 H+/oligopeptide sympor 98.5 8.8E-05 1.9E-09 75.3 27.2 158 117-274 56-243 (571)
255 PF00083 Sugar_tr: Sugar (and 98.5 1.2E-09 2.5E-14 110.0 -8.5 163 116-281 270-441 (451)
256 KOG0252 Inorganic phosphate tr 98.5 1.4E-07 2.9E-12 89.2 5.8 182 98-280 303-501 (538)
257 PF12832 MFS_1_like: MFS_1 lik 98.4 1.4E-06 3E-11 62.6 8.0 71 104-174 5-75 (77)
258 KOG2533 Permease of the major 98.4 1.5E-06 3.3E-11 86.2 10.8 165 98-264 272-444 (495)
259 KOG0254 Predicted transporter 98.4 1.9E-05 4.2E-10 80.6 17.3 180 100-280 296-487 (513)
260 PF06813 Nodulin-like: Nodulin 98.3 2.8E-05 6.1E-10 69.8 15.6 158 339-509 17-182 (250)
261 PF05631 DUF791: Protein of un 98.3 0.00036 7.8E-09 65.2 22.1 148 350-508 60-215 (354)
262 PF00854 PTR2: POT family; In 98.3 1E-05 2.2E-10 79.0 12.3 111 165-275 2-122 (372)
263 KOG0255 Synaptic vesicle trans 98.2 1.4E-05 3.1E-10 81.9 13.3 141 355-508 113-254 (521)
264 KOG2816 Predicted transporter 98.1 0.00014 2.9E-09 72.0 15.6 125 123-250 266-391 (463)
265 PF12832 MFS_1_like: MFS_1 lik 98.0 4.6E-05 1E-09 54.7 8.1 62 328-390 4-65 (77)
266 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00057 1.2E-08 70.9 17.2 163 340-510 3-183 (654)
267 PF07672 MFS_Mycoplasma: Mycop 97.9 0.0005 1.1E-08 60.9 14.3 101 221-337 2-107 (267)
268 KOG1479 Nucleoside transporter 97.9 0.0017 3.6E-08 61.9 18.2 120 101-222 20-149 (406)
269 TIGR00939 2a57 Equilibrative N 97.7 0.014 3.1E-07 57.7 23.2 53 188-245 105-157 (437)
270 KOG3880 Predicted small molecu 97.7 0.00037 8.1E-09 62.7 10.1 139 136-281 64-204 (409)
271 PF02487 CLN3: CLN3 protein; 97.7 0.0013 2.7E-08 63.3 14.2 138 104-248 252-394 (402)
272 PRK03612 spermidine synthase; 97.6 0.0078 1.7E-07 61.0 20.1 173 330-508 20-197 (521)
273 KOG3097 Predicted membrane pro 97.6 0.028 6E-07 51.7 21.0 71 145-218 69-139 (390)
274 PF03092 BT1: BT1 family; Int 97.6 0.0013 2.8E-08 65.4 13.8 159 346-510 11-176 (433)
275 PRK03612 spermidine synthase; 97.6 0.0071 1.5E-07 61.3 18.9 140 128-269 44-190 (521)
276 PF05978 UNC-93: Ion channel r 97.2 0.056 1.2E-06 44.8 16.9 109 364-482 41-150 (156)
277 KOG2563 Permease of the major 97.2 0.00074 1.6E-08 64.6 6.4 177 102-278 269-452 (480)
278 PF06963 FPN1: Ferroportin1 (F 97.2 0.0049 1.1E-07 60.4 12.2 148 101-248 260-415 (432)
279 KOG2325 Predicted transporter/ 97.2 0.0044 9.6E-08 60.9 11.7 176 326-509 36-229 (488)
280 KOG4830 Predicted sugar transp 97.2 0.00015 3.3E-09 63.4 1.3 64 316-379 193-256 (412)
281 PF01770 Folate_carrier: Reduc 96.9 0.061 1.3E-06 52.0 16.5 160 342-511 21-184 (412)
282 TIGR00769 AAA ADP/ATP carrier 96.7 0.17 3.7E-06 50.4 18.5 146 325-482 8-190 (472)
283 KOG3626 Organic anion transpor 96.7 0.013 2.9E-07 60.3 11.0 182 324-514 96-348 (735)
284 KOG3098 Uncharacterized conser 96.7 0.1 2.2E-06 51.4 16.1 143 105-248 246-411 (461)
285 TIGR00939 2a57 Equilibrative N 96.5 0.065 1.4E-06 53.1 14.1 111 137-248 310-431 (437)
286 PF06779 DUF1228: Protein of u 96.5 0.021 4.5E-07 41.4 7.5 76 338-423 6-81 (85)
287 COG0477 ProP Permeases of the 96.5 0.31 6.7E-06 45.5 18.2 152 338-497 16-173 (338)
288 KOG2601 Iron transporter [Inor 96.1 0.11 2.3E-06 48.9 11.7 166 102-267 30-217 (503)
289 PF03137 OATP: Organic Anion T 95.5 0.0021 4.5E-08 65.4 -1.6 165 338-511 16-252 (539)
290 PF00854 PTR2: POT family; In 94.4 0.36 7.9E-06 47.1 10.7 81 428-510 40-124 (372)
291 KOG1479 Nucleoside transporter 94.3 2.8 6.1E-05 40.5 15.7 180 326-509 20-204 (406)
292 KOG0637 Sucrose transporter an 94.0 0.12 2.7E-06 49.9 6.0 149 325-478 33-200 (498)
293 PF01733 Nucleoside_tran: Nucl 93.5 0.026 5.6E-07 53.4 0.6 110 138-247 186-306 (309)
294 KOG3880 Predicted small molecu 93.3 0.63 1.4E-05 42.7 8.8 112 133-248 287-401 (409)
295 PF01733 Nucleoside_tran: Nucl 93.0 0.03 6.6E-07 52.9 0.2 43 196-243 4-46 (309)
296 PF13000 Acatn: Acetyl-coenzym 91.7 2.1 4.5E-05 42.4 10.8 64 192-255 408-471 (544)
297 KOG4332 Predicted sugar transp 90.7 3.7 8E-05 37.1 10.4 135 136-270 284-425 (454)
298 COG4262 Predicted spermidine s 89.9 18 0.00039 34.2 20.1 152 121-274 29-189 (508)
299 KOG3574 Acetyl-CoA transporter 89.4 7.2 0.00016 37.4 11.7 67 324-394 31-102 (510)
300 KOG1237 H+/oligopeptide sympor 88.9 13 0.00028 38.5 14.4 171 329-508 42-244 (571)
301 KOG3810 Micronutrient transpor 84.8 12 0.00027 35.4 10.3 95 137-233 274-370 (433)
302 KOG2601 Iron transporter [Inor 84.2 17 0.00038 34.8 11.1 170 324-496 27-213 (503)
303 COG5336 Uncharacterized protei 80.3 6.7 0.00014 29.5 5.6 33 141-173 49-82 (116)
304 PF06912 DUF1275: Protein of u 79.7 42 0.00091 29.5 16.4 35 228-263 165-199 (209)
305 KOG2765 Predicted membrane pro 76.2 52 0.0011 31.4 11.4 31 138-170 190-220 (416)
306 COG4262 Predicted spermidine s 76.1 74 0.0016 30.4 15.9 44 342-385 25-68 (508)
307 PRK00293 dipZ thiol:disulfide 75.9 1E+02 0.0023 32.0 19.9 33 358-390 323-355 (571)
308 PRK10263 DNA translocase FtsK; 75.5 55 0.0012 37.1 13.1 34 468-502 142-175 (1355)
309 PF07672 MFS_Mycoplasma: Mycop 75.3 29 0.00063 31.5 9.3 66 138-203 145-218 (267)
310 PF02990 EMP70: Endomembrane p 73.2 1.2E+02 0.0025 31.3 15.2 68 318-387 252-320 (521)
311 PRK10263 DNA translocase FtsK; 72.8 52 0.0011 37.2 12.2 26 236-261 142-167 (1355)
312 COG5336 Uncharacterized protei 71.7 21 0.00045 27.0 6.2 33 453-485 38-70 (116)
313 TIGR00844 c_cpa1 na(+)/h(+) an 68.3 1.8E+02 0.0039 31.4 29.1 36 230-265 106-141 (810)
314 PF02694 UPF0060: Uncharacteri 61.0 18 0.00039 27.4 4.2 52 133-184 53-104 (107)
315 KOG3814 Signaling protein van 59.3 1.5E+02 0.0033 28.3 10.7 13 187-199 203-215 (531)
316 PF05255 UPF0220: Uncharacteri 59.0 84 0.0018 26.4 8.3 58 217-274 14-77 (166)
317 PF03547 Mem_trans: Membrane t 58.5 1.8E+02 0.004 28.3 20.5 19 318-336 239-257 (385)
318 COG2962 RarD Predicted permeas 58.5 1.5E+02 0.0033 27.3 11.4 93 316-426 61-154 (293)
319 PF03219 TLC: TLC ATP/ADP tran 58.5 2.2E+02 0.0047 29.0 27.5 55 447-502 307-363 (491)
320 PTZ00370 STEVOR; Provisional 58.1 12 0.00026 34.0 3.4 40 479-518 249-288 (296)
321 PF07857 DUF1632: CEO family ( 55.9 1.3E+02 0.0028 27.4 9.6 25 330-354 184-208 (254)
322 PRK13629 threonine/serine tran 55.7 2.2E+02 0.0049 28.4 17.2 41 220-265 19-59 (443)
323 PRK02237 hypothetical protein; 54.4 32 0.00069 26.2 4.6 51 134-184 56-106 (109)
324 PF02535 Zip: ZIP Zinc transpo 53.6 2E+02 0.0043 27.1 14.9 32 190-221 261-293 (317)
325 KOG2881 Predicted membrane pro 52.7 1.8E+02 0.0039 26.4 13.8 21 371-391 251-271 (294)
326 TIGR01478 STEVOR variant surfa 50.7 23 0.00051 32.1 4.0 36 484-519 258-293 (295)
327 PF11947 DUF3464: Protein of u 50.0 52 0.0011 27.1 5.6 51 187-240 95-145 (153)
328 PF07760 DUF1616: Protein of u 47.3 2E+02 0.0044 26.7 10.0 59 192-252 22-80 (287)
329 COG1230 CzcD Co/Zn/Cd efflux s 45.3 2.6E+02 0.0057 26.1 14.3 78 97-180 23-103 (296)
330 PF11947 DUF3464: Protein of u 41.8 1.6E+02 0.0035 24.3 7.2 32 133-164 95-126 (153)
331 COG1268 BioY Uncharacterized c 39.5 97 0.0021 26.5 5.9 23 141-163 89-111 (184)
332 PF00909 Ammonium_transp: Ammo 39.1 3.9E+02 0.0085 26.3 16.7 29 222-250 108-136 (399)
333 PF12805 FUSC-like: FUSC-like 37.6 1.8E+02 0.004 26.9 8.1 35 169-204 4-38 (284)
334 PF02632 BioY: BioY family; I 36.4 1.4E+02 0.0031 24.5 6.3 24 142-165 61-84 (148)
335 PF06638 Strabismus: Strabismu 35.2 1.7E+02 0.0037 29.3 7.5 12 187-198 179-190 (505)
336 PF03596 Cad: Cadmium resistan 34.4 2.5E+02 0.0053 24.3 7.6 29 242-270 43-71 (191)
337 TIGR01666 YCCS hypothetical me 33.7 2.9E+02 0.0062 29.7 9.5 49 155-204 44-96 (704)
338 PF11299 DUF3100: Protein of u 33.6 1E+02 0.0023 27.3 5.2 54 194-248 176-229 (241)
339 PF09527 ATPase_gene1: Putativ 32.1 1.5E+02 0.0032 19.3 5.7 34 142-175 8-42 (55)
340 COG1457 CodB Purine-cytosine p 31.9 5.3E+02 0.012 25.8 24.2 147 215-390 11-158 (442)
341 COG3619 Predicted membrane pro 31.2 3.8E+02 0.0083 23.9 19.6 26 228-253 171-196 (226)
342 PTZ00370 STEVOR; Provisional 31.2 2.2E+02 0.0047 26.3 6.9 39 240-278 243-281 (296)
343 PF11368 DUF3169: Protein of u 30.0 4.2E+02 0.0091 24.0 11.3 25 224-248 9-33 (248)
344 PF05297 Herpes_LMP1: Herpesvi 29.4 18 0.00039 32.6 0.0 33 450-482 128-160 (381)
345 PF05545 FixQ: Cbb3-type cytoc 28.3 78 0.0017 20.1 2.8 15 503-517 25-39 (49)
346 PRK10599 calcium/sodium:proton 27.6 5.8E+02 0.012 24.8 9.6 26 115-140 238-263 (366)
347 KOG1307 K+-dependent Ca2+/Na+ 27.6 1.5E+02 0.0032 29.4 5.5 40 123-164 448-487 (588)
348 PF06645 SPC12: Microsomal sig 27.2 1E+02 0.0022 21.9 3.5 30 471-503 21-50 (76)
349 PF11151 DUF2929: Protein of u 26.5 2E+02 0.0043 19.1 5.3 39 235-273 12-50 (57)
350 PF08566 Pam17: Mitochondrial 25.8 3.5E+02 0.0076 22.9 6.8 35 125-159 68-104 (173)
351 TIGR02230 ATPase_gene1 F0F1-AT 25.4 2.8E+02 0.006 21.1 5.6 27 148-174 56-83 (100)
352 COG1742 Uncharacterized conser 25.2 72 0.0016 24.1 2.4 53 132-184 53-105 (109)
353 PF03596 Cad: Cadmium resistan 25.1 1.8E+02 0.0039 25.1 5.3 46 117-165 112-166 (191)
354 PF11833 DUF3353: Protein of u 25.1 4.6E+02 0.0099 22.8 8.9 31 220-250 136-166 (194)
355 PRK10995 inner membrane protei 25.0 4.9E+02 0.011 23.1 9.9 66 443-508 28-93 (221)
356 TIGR01667 YCCS_YHJK integral m 24.9 5E+02 0.011 27.9 9.6 50 154-204 43-96 (701)
357 PF11299 DUF3100: Protein of u 24.7 2.2E+02 0.0048 25.3 5.7 34 352-385 131-164 (241)
358 PRK10692 hypothetical protein; 24.7 1.6E+02 0.0035 21.4 4.0 17 163-179 3-19 (92)
359 PF00909 Ammonium_transp: Ammo 24.7 6.8E+02 0.015 24.6 12.0 48 197-244 278-325 (399)
360 PRK00187 multidrug efflux prot 24.2 7.4E+02 0.016 24.9 32.7 11 154-164 70-80 (464)
361 COG0786 GltS Na+/glutamate sym 23.8 5.1E+02 0.011 25.3 8.3 107 136-253 281-389 (404)
362 COG1811 Uncharacterized membra 23.7 3.5E+02 0.0076 23.8 6.6 56 372-436 15-70 (228)
363 PRK11715 inner membrane protei 23.5 7.5E+02 0.016 24.7 10.1 15 213-227 375-389 (436)
364 PF04226 Transgly_assoc: Trans 23.0 2.1E+02 0.0046 18.2 5.2 31 240-270 6-40 (48)
365 PF04474 DUF554: Protein of un 22.5 3.8E+02 0.0081 23.9 6.8 57 371-436 13-69 (226)
366 KOG2262 Sexual differentiation 22.3 3.7E+02 0.0079 28.3 7.4 12 149-160 109-120 (761)
367 COG4769 Predicted membrane pro 22.0 1.7E+02 0.0037 24.4 4.2 51 143-201 82-132 (181)
368 KOG2887 Membrane protein invol 22.0 4.9E+02 0.011 22.0 10.5 63 155-225 100-163 (175)
369 PF10225 DUF2215: Uncharacteri 22.0 5.1E+02 0.011 23.5 7.8 51 187-241 32-82 (249)
370 PF13440 Polysacc_synt_3: Poly 22.0 5.5E+02 0.012 22.6 21.3 33 343-376 201-233 (251)
371 KOG3097 Predicted membrane pro 21.6 7.3E+02 0.016 23.9 10.9 60 324-390 29-88 (390)
372 PF10785 NADH-u_ox-rdase: NADH 21.5 2.6E+02 0.0056 20.5 4.8 39 146-184 30-75 (86)
373 TIGR00836 amt ammonium transpo 21.5 8E+02 0.017 24.3 11.7 48 198-245 284-331 (403)
374 PF12670 DUF3792: Protein of u 21.2 4E+02 0.0087 20.7 10.6 43 125-170 28-70 (116)
375 COG2076 EmrE Membrane transpor 20.9 3.9E+02 0.0085 20.5 7.2 58 154-212 20-77 (106)
376 PF06123 CreD: Inner membrane 20.8 8.5E+02 0.018 24.3 10.5 29 156-184 313-346 (430)
377 PF10183 ESSS: ESSS subunit of 20.7 1.4E+02 0.0031 22.8 3.5 30 250-279 55-84 (105)
378 cd01324 cbb3_Oxidase_CcoQ Cyto 20.1 1.5E+02 0.0033 18.8 2.9 16 503-518 26-41 (48)
379 PF12273 RCR: Chitin synthesis 20.1 53 0.0011 26.3 1.1 13 255-267 1-13 (130)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-42 Score=316.99 Aligned_cols=409 Identities=20% Similarity=0.251 Sum_probs=329.5
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHH
Q 009978 91 EFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (521)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~ 170 (521)
+.-+++|++++..+++++...++.+..++.+.|.+.++.++|.+|+|++.+++.+.+.++..+.|.++||.+.|+.+.++
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~g 100 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHH
Confidence 34466788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHH--HHh
Q 009978 171 VALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS--PIL 248 (521)
Q Consensus 171 ~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~--~~l 248 (521)
+++.++..++++++ ++.+.+.+..++.|..+|...|++...+..|+++++||+..++++.+-++|..+.|++. +++
T Consensus 101 Lilsai~nil~Gfs--~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 101 LILSAIVNILFGFS--PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999999999 889
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCC-CCCCCchHHHHHhcchHH
Q 009978 249 MSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK-PATVIPPFRRLLSKMPTW 327 (521)
Q Consensus 249 ~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 327 (521)
..+.+||..|++.++++++..++.++..+++|++..-.+-+|......+..+ ++++.+ -.....-.+.+++||.+|
T Consensus 179 ~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~---~~~~~~~ls~~~i~~~YVL~Nk~iW 255 (448)
T COG2271 179 AFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYE---EEKENEGLTAWQIFVKYVLKNKLIW 255 (448)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhh---hhccCCCccHHHHHHHHHHcChHHH
Confidence 8888999999999999999999888888999887654333332211100000 001101 011112356789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
.++++.++.+..-+++..|.|.|+.|..|++...+.+..+.+-.+++.|.+++||++||+.+.+ |.....+..+
T Consensus 256 ~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~ 329 (448)
T COG2271 256 LLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFML 329 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999986432 1233333334
Q ss_pred HHHHHHHHHhccchh-HHHHHHHHHHHHHHhhhhhhh-HHHHHhhhcc-chhhHHhHHHHHHHH-HHHHHHHHHHHHhhc
Q 009978 408 APGIALIGLTAAKSP-VMASAWLTLAIGMKSFSHSGF-LVNLQEIAPQ-YSGVLHGISNTAGTF-AAILGTVGAGFFVEL 483 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~ 483 (521)
+..+++..+...++. .......++..++...++... -....|+.|+ ..|++.|+...+.++ |...+....|++.|.
T Consensus 330 ~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 330 LITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 444444433333322 223333333333333333322 3445577775 889999999999998 999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccC
Q 009978 484 VGSFQGFLLLTSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (521)
.| |...|++..+.++++.++++...+.
T Consensus 410 ~g-W~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 410 WG-WDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred CC-CcchHHHHHHHHHHHHHHHHHHHhh
Confidence 87 9999998888888777766655443
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=309.20 Aligned_cols=382 Identities=21% Similarity=0.249 Sum_probs=316.8
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+..+..++.+.++.|............+|++.+|+|+|..+.|++.|.|.++..++.++...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 33466777888888988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
.++.++++++ +||+.++++|++.|+..|.+++...++..+..|+++|++++++...+.+++.++|.+++.++.+.+||
T Consensus 89 i~~n~l~alA--p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 89 IVSNLLSALA--PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHH
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 334 (521)
|+.|+..+.++++..+..+...| |++.+ +++.....+..+++|+|.++...+..+
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~~~-----------------------~~~~~~~~~~~~~l~~p~v~~~l~~t~ 221 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSEIS-----------------------GSLPGPLRTLLRLLRRPGVLLGLLATF 221 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CccCC-----------------------CCCCcchhHHHHHhcCchHHHHHHHHH
Confidence 99999999999998888888777 11111 111122233458899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHH
Q 009978 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (521)
+...+.+..++|+.+++++..|++....++....++++.++|+.++|++.|| +.+ ..+.....+....++
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~---------~~l~~~~~l~a~~~l 291 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR---------RALIAALLLLALALL 291 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch---------hHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 555 122233233333333
Q ss_pred HHhc-cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Q 009978 415 GLTA-AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLL 493 (521)
Q Consensus 415 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 493 (521)
.+.. .++.+......++.................+..|+.++.+.+++....++|..+|..++|.+.|+.| +....+.
T Consensus 292 ~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~ 370 (394)
T COG2814 292 ALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWV 370 (394)
T ss_pred HHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHH
Confidence 3333 3333333333333222222222233333444556999999999999999999999999999999977 9999999
Q ss_pred HHHHHHHHHHHHHHhccCccc
Q 009978 494 TSLLYFLSALFYIIFSTGERV 514 (521)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~ 514 (521)
.+++.+++.++.+...+.+++
T Consensus 371 ~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 371 GAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHHHHHHHHhcccc
Confidence 999888888877766554443
No 3
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=3.5e-39 Score=317.11 Aligned_cols=383 Identities=15% Similarity=0.145 Sum_probs=297.2
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHH
Q 009978 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (521)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~ 175 (521)
++|..+..+.+..+..........+.+|.+.+++|.|+.++|++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34554555555545444444455667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCch
Q 009978 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (521)
Q Consensus 176 ~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~ 255 (521)
++.++++++ +|++.+++.|+++|++.+...+...+++.|++|+++|+++++++..+.++|..+||++++.+.+.+|||
T Consensus 86 ~~~~~~~~~--~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 86 ASHVLSALA--WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 999999998 999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHH
Q 009978 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (521)
Q Consensus 256 ~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 335 (521)
+.|++.+++.++..+..+...|+.+++++ ...++.++.+|+|.++...+..++
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 216 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPSEHS---------------------------GSLKSLPLLFRRPALVSLYLLTVV 216 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCc---------------------------chHHHHHHHHhCcHHHHHHHHHHH
Confidence 99999998877766555554454332110 011245678899988877666666
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 009978 336 HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (521)
..........+.+.++++..|++..+++...+...++.++++++.+++.||+++|. ..........+. ...
T Consensus 217 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~--------~~~~~~~~~~~~-~~l 287 (390)
T PRK03545 217 VVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF--------LLIAIALLLVCL-LLL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH--------HHHHHHHHHHHH-HHH
Confidence 66666666778888888878999999999999999999999999999999988761 222222121221 122
Q ss_pred HhccchhHHHHHHH-HHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 009978 416 LTAAKSPVMASAWL-TLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLT 494 (521)
Q Consensus 416 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 494 (521)
....++.+...... +.+.+. ....+.......+..|+.++++.|+++...++|..+||.+.|.+.|..| +...|.+.
T Consensus 288 ~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~ 365 (390)
T PRK03545 288 LPAANSEWHLSVLSIFWGIAI-MCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVG 365 (390)
T ss_pred HHHhchHHHHHHHHHHHHHHH-hcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHH
Confidence 22233333333322 233332 2333344555667778899999999999999999999999999999998 89999999
Q ss_pred HHHHHHHHHHHHHhccCccccccc
Q 009978 495 SLLYFLSALFYIIFSTGERVNFDE 518 (521)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~ 518 (521)
+++.+++.+......++.....||
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~ 389 (390)
T PRK03545 366 AALALAALVWSILIFRRFPVTLEE 389 (390)
T ss_pred HHHHHHHHHHHHHHccccchhhcc
Confidence 988888888877776655555444
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=6.4e-40 Score=329.30 Aligned_cols=402 Identities=17% Similarity=0.128 Sum_probs=297.5
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH
Q 009978 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (521)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~ 173 (521)
.+..+..+.++++.+++.+.++..+++..|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|||+++.++.++
T Consensus 24 ~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~ 103 (467)
T PRK09556 24 FKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHH
Confidence 44466778888888999999999999999999999999999999999999999999999999999999999999888887
Q ss_pred HHHHHhhhhh-----ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 174 WSLATFLTPW-----AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 174 ~~~~~~l~~~-----~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
.+++.++.++ + ++++.+++.|+++|++.+...+...+++.||+|+++|++++|+...+.++|.++++++..++
T Consensus 104 ~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 104 SAICMLGFGASLGSGS--VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 7776655443 5 78999999999999999999999999999999999999999999999999999999998877
Q ss_pred hhcc---CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchH-HHHHhcc
Q 009978 249 MSQA---GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF-RRLLSKM 324 (521)
Q Consensus 249 ~~~~---gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 324 (521)
.+.. +||..|.+.+++.++..++.++..++.|++.+..++++. ..+..... ....+.++....+.+ +..+++|
T Consensus 182 ~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 258 (467)
T PRK09556 182 ANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEI--FGEPISEE-DKETESTDMTKWQIFVEYVLKNP 258 (467)
T ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhc--ccCccchh-hhccccccCcHHHHHHHHHHcCh
Confidence 6643 699999988888777766666666666654332222210 00000000 000000011111112 3378999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (521)
.+|...+..++......+...|.|.|+++.+|++..++++......++..++.++.|+++||+++|+. .....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~-------~~~~~ 331 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA-------LVACI 331 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch-------HHHHH
Confidence 99999999888888888889999999998899999999999999999999999999999999998732 22111
Q ss_pred HHHHHHHHHHHHhccchhHHH-HHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHH-HHHHHHHHHHHHh
Q 009978 405 GFIAPGIALIGLTAAKSPVMA-SAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTF-AAILGTVGAGFFV 481 (521)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~ 481 (521)
........++.+...++.... +..++++.+..+.. ........+..| +.+|++.|+.+...++ |.+++|.+.|++.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~ 410 (467)
T PRK09556 332 ALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQ-LLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIA 410 (467)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHH-HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHh
Confidence 111112112222222333322 22222222211111 112234446666 5899999999999997 7799999999999
Q ss_pred h------------cccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 482 E------------LVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 482 ~------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
| ..| |...|.+..++.+++.+..+.+.
T Consensus 411 ~~~~~g~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 411 DPTKNGTPIFGYTLTG-WAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred cccccccccccccccC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 455 89999888888888776666553
No 5
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.7e-38 Score=319.58 Aligned_cols=418 Identities=27% Similarity=0.492 Sum_probs=325.5
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhh----------------------hhcCCcchhhHHHHHHHHHHHHh
Q 009978 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSL----------------------AHGWSRSFSGIVQSSFLWGYLVS 150 (521)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~g~~~s~~~~~~~i~ 150 (521)
..+.+|.+..++++...+.+.++...+...+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 35567888888888899999999999999988877 78999999999999999999999
Q ss_pred hhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHH
Q 009978 151 PIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIA 230 (521)
Q Consensus 151 ~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 230 (521)
+++.|+++||+|||+++.++.++.+++.+++.++...+++.+++.|+++|++.+...+....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999988888765442256888999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHhhhcc-CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCC
Q 009978 231 MGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK 309 (521)
Q Consensus 231 ~~~~~~g~~~g~~l~~~l~~~~-gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (521)
..+..+|..+++++++.+.+.. |||+.|++.+++.++..++.+...+++|+.++..+++|.+...+..+ ++.+
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~------~~~~ 246 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQ------GQKG 246 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcc------cccC
Confidence 9999999999999999999884 99999999999888777777777777776544444444333322111 1111
Q ss_pred CCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHh
Q 009978 310 PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (521)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (521)
+.+...++++++++|.+|...+..++.....+.+..|+|.|+++.+|++..+.++..++..++..++.++.|++.||+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~ 326 (465)
T TIGR00894 247 STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKS 326 (465)
T ss_pred CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223468899999999999999999999999999999999999899999999999999999999999999999999987
Q ss_pred cCCCcchh-HHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHH
Q 009978 390 RGTSVTLT-RKILQSIGFIAPGIALIGLTA-AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGT 467 (521)
Q Consensus 390 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 467 (521)
|+...... ++....++..+.+...+.... ..+....+..+.++.+..+...+.......+..|+..|.+.|+.+..+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 406 (465)
T TIGR00894 327 SKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGF 406 (465)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHH
Confidence 65432211 122222222222222222222 2233333333344444333334444455667788899999999999999
Q ss_pred HHHHHHHHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 009978 468 FAAILGTVGAGFFVELV--GSFQGFLLLTSLLYFLSALFYIIFSTGERVNF 516 (521)
Q Consensus 468 ~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (521)
+++.++|.+.|.+.+.. +.|...|.+.+++.+++.++.....+.+++++
T Consensus 407 l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w 457 (465)
T TIGR00894 407 IGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAERQDW 457 (465)
T ss_pred HHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecceecCC
Confidence 99999999999988753 45888999988888888877777666665544
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.2e-38 Score=314.47 Aligned_cols=393 Identities=18% Similarity=0.203 Sum_probs=295.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+.+|..+..+++.++++++++...+...|.+.+|+|++..++|++.+++.+++.+++++.|++.||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 45678888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh----
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS---- 250 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 250 (521)
.++.++++++ +|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+..+|..+++++++++.+
T Consensus 84 ~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 84 GIASTATMFA--TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHh--cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999998 9999999999999999999999999999999999999999999999999999999999998864
Q ss_pred --ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhcccc---ccCCCCCCC---CCCchHHHHHh
Q 009978 251 --QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPL---LMGNKHKPA---TVIPPFRRLLS 322 (521)
Q Consensus 251 --~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~ 322 (521)
..|||+.|++.++..++..++.++..||+|++.+...+++.+...+..+... +..++...+ .....++.++
T Consensus 162 ~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (412)
T TIGR02332 162 MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF- 240 (412)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-
Confidence 3699999999988887776666677788876544333333322222111100 000000001 1112344444
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHH
Q 009978 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFV-YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKIL 401 (521)
Q Consensus 323 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~ 401 (521)
+|.+|...+..++.....+.+..|+|.++++. .|.+..+++.......++..++.++.|+++||+++|+ ...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~-------~~~ 313 (412)
T TIGR02332 241 TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK-------HHT 313 (412)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH-------HHH
Confidence 68888888888888888889999999999883 3677788898899999999999999999999998762 111
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhh-ccchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 009978 402 QSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGISNTAGTFAAILGTVGAGFF 480 (521)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 480 (521)
........+.+............+..+++.........+.......+.. +++++++.|+.+...++|++++|.+.|.+
T Consensus 314 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i 392 (412)
T TIGR02332 314 -ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGIL 392 (412)
T ss_pred -HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccc
Confidence 1111222222222212222222221111111111111122223334444 47999999999999999999999999999
Q ss_pred hhcccchHHHHHHHHHHH
Q 009978 481 VELVGSFQGFLLLTSLLY 498 (521)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~ 498 (521)
.|..|+|...+.+++++.
T Consensus 393 ~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 393 KDATGSFNSGLWFVAALL 410 (412)
T ss_pred cccCCCCchhHHHHHHHH
Confidence 999888888887776654
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.5e-38 Score=314.73 Aligned_cols=408 Identities=18% Similarity=0.165 Sum_probs=298.6
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+.++.......+.++..+++...++..+|.+.+++|+|..+.|++.+.+.++..+++++.|+++||+|||+++.++.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 34556666677788888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
+++.++++++ ++++.+++.|++.|++.|...+...+++.+++|+++|++++++++.+.++|..+++++++++.+.+||
T Consensus 99 ~~~~~~~~~~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw 176 (434)
T PRK11663 99 GIINILFGFS--SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW 176 (434)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence 9999999888 89999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHH-HHHhcchHHHHHHHH
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFR-RLLSKMPTWSIIVAN 333 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 333 (521)
|+.|++.+++.++..+...+..+|+|++.......+.+...++..+ +.+.++.+..+.++ ..+++|.+|.+.+..
T Consensus 177 ~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (434)
T PRK11663 177 RYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQ----QQEGAGLSRKEILTKYVLLNPYIWLLSFSY 252 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccch----hccccCCChhhhHHHHHhcChHHHHHHHHH
Confidence 9999998887766555555555665543211100000000000000 00000011111122 366788999888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHH
Q 009978 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (521)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
++.......+..|+|.|+.+.+|++..+++...+...+++.+++++.|++.||+.+++... .......+.......+
T Consensus 253 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~---~~~~~~~~~~~~~~~~ 329 (434)
T PRK11663 253 VLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGP---MNLIFAAGILLSVGSL 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccH---HHHHHHHHHHHHHHHH
Confidence 7777778888899999998778999999999999999999999999999999994332100 0011112222222222
Q ss_pred HHHhccchhHHHHHHHHHHHHHHhhhh-hhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Q 009978 414 IGLTAAKSPVMASAWLTLAIGMKSFSH-SGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFL 491 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 491 (521)
..+.. .+..... ...+..++..... ........+..| +.+|++.|+.++..++|.+++|.+.|++.|..| +...|
T Consensus 330 ~~~~~-~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f 406 (434)
T PRK11663 330 WLMPF-ASYVMQA-ACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFF 406 (434)
T ss_pred HHccc-ccHHHHH-HHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHH
Confidence 22222 2222211 1222222222211 122334456565 699999999999999999999999999999988 99999
Q ss_pred HHHHHHHHHHHHHHHHhccCccc
Q 009978 492 LLTSLLYFLSALFYIIFSTGERV 514 (521)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~ 514 (521)
+..+++.+++.+..+...+++++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 407 VVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhch
Confidence 99988887777666555444443
No 8
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-38 Score=308.00 Aligned_cols=386 Identities=32% Similarity=0.630 Sum_probs=343.6
Q ss_pred hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcch
Q 009978 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVA 206 (521)
Q Consensus 127 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~ 206 (521)
.++++|..+.+++.+.+..|+.+++++.|+++||+|.|+++..+.++.++++++..++...+++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46889999999999999999999999999999999999999999999999999998886667778899999999999999
Q ss_pred hhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc-cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 009978 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ 285 (521)
Q Consensus 207 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~ 285 (521)
+|+...+..+|.|++||++..++...+..+|.+++.+++|++.+. +||+..|++.++++++..++++.+..|+|.+++.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 999999999999999999999999999999999999999999998 9999999999999999999999999999999888
Q ss_pred CchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhH
Q 009978 286 ISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWF 365 (521)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 365 (521)
..++|.+.+.+...+. ..++....+++++++++.+|.+.+..++...+.+.+..|.|.|+++++|++..+.|++
T Consensus 226 is~~El~~I~~~k~~~------~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~ 299 (466)
T KOG2532|consen 226 ISEKELKYIEKGKSEA------HVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFL 299 (466)
T ss_pred CCHHHHHHHHhccccc------ccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHH
Confidence 8888888877654322 1111156799999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHHHHHhhhhhhh
Q 009978 366 SAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK--SPVMASAWLTLAIGMKSFSHSGF 443 (521)
Q Consensus 366 ~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 443 (521)
.++..+...+..+++|.++||+.+|....+..|+..-.++..+.++.++.+...+ +.+..++.+.+..+..+...++.
T Consensus 300 salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf 379 (466)
T KOG2532|consen 300 SALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGF 379 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhh
Confidence 9999999999999999999999887666677788888899999988888887766 33445556666677777777777
Q ss_pred HHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHHHHhccCccccccc
Q 009978 444 LVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE--LVGSFQGFLLLTSLLYFLSALFYIIFSTGERVNFDE 518 (521)
Q Consensus 444 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (521)
+....+..|++.+.++|+.+.+..+.++++|.+.|.+.. ....|+.+|++.+++.+++.+++.++.+.+++++++
T Consensus 380 ~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~ 456 (466)
T KOG2532|consen 380 YKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTK 456 (466)
T ss_pred HhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccC
Confidence 777777789999999999999999999999999999994 233699999999999999998888887777766643
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.4e-36 Score=300.79 Aligned_cols=383 Identities=21% Similarity=0.186 Sum_probs=291.1
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+++|..+.+.++..+.++++....+...|.+.+++|.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 46788888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
.++.+++.+. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+|
T Consensus 91 ~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 91 GLFSLATAQA--WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHh--ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 9988888888 89999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHh---cchHHHHHH
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLS---KMPTWSIIV 331 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l 331 (521)
|+.|++.+++.++..++.....||+++..+...+++ ++ ....+..++ .+..+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~---~~~~~~~~~~~~~~~~~~~~~ 227 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK------------------QR---APVLRALFGEGRATATLLLWI 227 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch------------------hh---hhhHHHHhhhhhhhHHHHHHH
Confidence 999999887766665555555566543211100000 00 001112222 223334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH
Q 009978 332 ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (521)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (521)
..++.....+....|.|.++++ .|+++.+.+...+...++.++++++.|++.||+++++ ..........+
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~ 297 (406)
T PRK11551 228 SYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR---------VVLLIYAGILA 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH---------HHHHHHHHHHH
Confidence 4455555666777889999988 7999999999999999999999999999999999872 22223333333
Q ss_pred HHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHH
Q 009978 412 ALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGF 490 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 490 (521)
.++.+...++.+......++.........+.......+..| ++|+++.|+.+....+|..++|.+.|.+.++.+++...
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~ 377 (406)
T PRK11551 298 SLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGV 377 (406)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHH
Confidence 33333333333333222222222222333444555566655 68999999999999999999999999999987767777
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 009978 491 LLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~ 510 (521)
+.....+.+++.++.+...+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 378 IGASIPVILVAALAALLLVS 397 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 77776666666655554433
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=6.8e-37 Score=302.37 Aligned_cols=394 Identities=25% Similarity=0.416 Sum_probs=303.7
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhcccc
Q 009978 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT 187 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~ 187 (521)
+++.+++...++...|.+.+++|.++.+.|++.+++.++..++.++.|+++||+|||+++.++.++.+++.++++++ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA--G 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH--c
Confidence 45567777889999999999999999999999999999999999999999999999999999999999999999998 8
Q ss_pred chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 009978 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (521)
Q Consensus 188 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i 267 (521)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+...++|..+++.+++.+.+..+||+.|++.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888777
Q ss_pred HHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 009978 268 WVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWM 347 (521)
Q Consensus 268 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 347 (521)
..+..++..++++++++..++++++...+....+ .+.+++++......++.+++|.++...+..++.......+..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAE--QQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWF 238 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccc--cccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 7666666666655443332222222111111100 01112223344567788999999999999999988999999999
Q ss_pred HHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Q 009978 348 PIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASA 427 (521)
Q Consensus 348 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (521)
|.|+++.+|.+..+.++..+...++..++.++.+++.||+++|+...... ......+..............+..+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (399)
T TIGR00893 239 PTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA-RKTAIIAGLVLSLLMFATNYVNIPYAALA 317 (399)
T ss_pred HHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH-HHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 99999888999999999999999999999999999999999985221111 01111111111122222222223333333
Q ss_pred HHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Q 009978 428 WLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYI 506 (521)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 506 (521)
...++.+..+ ..+....+..+..| ++|+++.|+.+...++|..++|.+.|.+.|..|++...+.+.+++.+++.+..+
T Consensus 318 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 318 LVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 3333333333 45556666666666 689999999999999999999999999999887788888888887777666554
Q ss_pred H
Q 009978 507 I 507 (521)
Q Consensus 507 ~ 507 (521)
.
T Consensus 397 ~ 397 (399)
T TIGR00893 397 L 397 (399)
T ss_pred H
Confidence 3
No 11
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.4e-36 Score=311.57 Aligned_cols=406 Identities=16% Similarity=0.158 Sum_probs=296.8
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH
Q 009978 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (521)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~ 173 (521)
.+++|.++++++++.+...++...++..+|.+.++++++..+.+++.+++.++.+++++++|+++||+|||++++++.++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45678888888888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-
Q 009978 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA- 252 (521)
Q Consensus 174 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~- 252 (521)
.+++.++++++ ++++.++++|++.|++.++..+...+++.|++|+++|++.++++..++.+|.++++.++..+...+
T Consensus 242 ~~i~~ll~afa--~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 242 NGFFAFFSSFV--QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999988 899999999999999999999999999999999999999999999999999999999887776433
Q ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CchhHHHHHHHhhccccc----------------
Q 009978 253 ------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEYILREKQKPLL---------------- 303 (521)
Q Consensus 253 ------------gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------------- 303 (521)
+||+.+++.++..++.+ +..++.||+|+.... .+.++.....++......
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 58888888777665544 445567888764211 111222211111110000
Q ss_pred ---cCC-----CCCCCC---------------CCchHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 009978 304 ---MGN-----KHKPAT---------------VIPPFRRLLSKM---PTWSIIVANAMHSWGFFVILSWMPIYFNFV--- 354 (521)
Q Consensus 304 ---~~~-----~~~~~~---------------~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--- 354 (521)
... +.+... .+.+++.+++.+ ..+.+++.+++..++++++..|+|.++++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000000 011344555443 356677778888889999999999886541
Q ss_pred -h-----------------CCCcc--------------------------------------------------------
Q 009978 355 -Y-----------------HIDLR-------------------------------------------------------- 360 (521)
Q Consensus 355 -~-----------------g~~~~-------------------------------------------------------- 360 (521)
+ +++..
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 0 00000
Q ss_pred -------------------------------------cchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHH
Q 009978 361 -------------------------------------QASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (521)
Q Consensus 361 -------------------------------------~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (521)
.......+..++.+++.++.+++.||+||| .++.
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr---------~~l~ 629 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL---------RMLA 629 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHH
Confidence 012234456678899999999999999998 3344
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh
Q 009978 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 482 (521)
++.++.+++.+.+....+....++..++..++.....+....+..+..| +.|++++|+.++...+|.+++|.++|.+.+
T Consensus 630 ~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 630 GSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555544444444433333334344444556667788888888 589999999999999999999999999887
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhccCcc
Q 009978 483 LVGSFQGFLLLTSLLYFLSALFYIIFSTGER 513 (521)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (521)
. + ...+|++++++.++++++.+++++.++
T Consensus 710 ~-~-~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 710 I-T-KAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred h-h-hHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 5 3 567788887777777776666654433
No 12
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.6e-36 Score=301.83 Aligned_cols=411 Identities=18% Similarity=0.243 Sum_probs=286.2
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHH
Q 009978 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (521)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~ 172 (521)
.++++|..+...++.....+.++..++...|.+.++ |+++.+.|++.+.+.++..+++++.|+++||+|||+++.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~ 101 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLI 101 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHH
Confidence 344556666666667777777777788889998888 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcc--ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhH-HHHHHHHHhh
Q 009978 173 LWSLATFLTPWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA-IGLVLSPILM 249 (521)
Q Consensus 173 ~~~~~~~l~~~~~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~l~~~l~ 249 (521)
+.+++.+++++.. ..+++.+++.|++.|++.+...+.....+.+++|+++|++++++++.+.++|.. .+|+++..+.
T Consensus 102 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 102 LAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred HHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 9999888877651 136888899999999999988888888999999999999999999999998864 4555544443
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchH-HHHHhcchHHH
Q 009978 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF-RRLLSKMPTWS 328 (521)
Q Consensus 250 ~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 328 (521)
...|||+.|++.+++.++..++.++..+|+|++....++++.+. +..+.. ..+++++.+..+.+ +.++++|.+|.
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKN---DYPDDY-NEKHEQELTAKQIFMQYVLPNKLLWY 257 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhh---cccccc-ccccCCCccHHHHHHHHHHcChHHHH
Confidence 44599999999988877766666666676655432211111110 000000 00000111111112 34678899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHH
Q 009978 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (521)
Q Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (521)
..+..++.....+....|+|.|+++..|++..+++....+..++.+++.++.|+++||+++++... ..+....+..
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~----~~~~~~~l~~ 333 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA----TGVFFMTLVT 333 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcch----HHHHHHHHHH
Confidence 888888888888888899999999988999889998888888999999999999999995432110 0111111111
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhhh-hhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHH-HHHHHHHHhhccc
Q 009978 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFS-HSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAIL-GTVGAGFFVELVG 485 (521)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~g 485 (521)
.+...+.+....+.+..... ++..+..... .........+..| +.+|+++|+.+...++|+.+ +|.+.|.+.|..|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 334 IATIVYWLNPAGNPTVDMAC-MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred HHHHHHHHhcccChHHHHHH-HHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc
Confidence 12222222222222222221 1112221111 1122233445555 68999999999999988765 7999999999998
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhccCccc
Q 009978 486 SFQGFLLLTSLLYFLSALFYIIFSTGERV 514 (521)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (521)
|...|.+++++.+++++....+.+.+++
T Consensus 413 -~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 440 (452)
T PRK11273 413 -WDGGFMVMIGGSILAVILLIVVMIGEKR 440 (452)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 8999988888777777666655444443
No 13
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2e-36 Score=292.23 Aligned_cols=360 Identities=12% Similarity=0.082 Sum_probs=267.3
Q ss_pred HhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchH
Q 009978 111 CNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (521)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (521)
+......+++.+|.+.+|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+..... ++++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP--FNYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh--ccHH
Confidence 44556688999999999999999999999999999999999999999999999988766655555544333343 6899
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHH
Q 009978 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (521)
Q Consensus 191 ~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i 270 (521)
.+++.|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.++++++++++.+.+|||+.|++.+++.++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999986 5566667799999999999999999999999999999999999999999999998888887777
Q ss_pred HHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 271 VWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIY 350 (521)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (521)
+.++..||+|+++++..+. ++..+++++++++|.+|.+.+..++....++.+..|+|.|
T Consensus 160 ~~~~~lp~~p~~~~~~~~~---------------------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~ 218 (368)
T TIGR00903 160 LVLAALPALPFQAAEGFGF---------------------KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAA 218 (368)
T ss_pred HHHHHcCCCCCCCCCCcch---------------------HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777778776543210000 0001246789999999999999999999999999999999
Q ss_pred HHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Q 009978 351 FNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLT 430 (521)
Q Consensus 351 ~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (521)
+++ .|++.. .+....+..+.+.++ .+++.||..|++.+ ...........++....+....+....+....
T Consensus 219 L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r-----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 288 (368)
T TIGR00903 219 LRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLR-----SIYIRAAALLIAAFFLALAFELNRLALFAFIG 288 (368)
T ss_pred HHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhH-----HHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 987 688764 555555555544444 57888887665321 11111122222233333333333333333333
Q ss_pred HHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHH
Q 009978 431 LAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYII 507 (521)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (521)
+...+.....+....+..|..| +.||++.|+.+..+++++.++|.+.+.+.. | ....|.+.++..+++.+..++
T Consensus 289 l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i~~~~~~~ 363 (368)
T TIGR00903 289 IAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEAYFTFLAILITIAFAIALL 363 (368)
T ss_pred HHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHHHHHh
Confidence 3333333344456677778887 599999999999999999999999998874 4 667777777777777666543
No 14
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.4e-35 Score=290.85 Aligned_cols=368 Identities=15% Similarity=0.142 Sum_probs=278.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHH
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~ 176 (521)
.|..+..+.+..+............+|++.+++|.++++.|+..+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 56655555555555555555666778999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchh
Q 009978 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (521)
Q Consensus 177 ~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~ 256 (521)
+.+++.++ ++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+.++|..+||++++.+.+.+|||+
T Consensus 98 ~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 98 SCLLVSFA--NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHH--ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 99999888 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHH
Q 009978 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (521)
Q Consensus 257 ~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 336 (521)
.|++.+++.++..+......||.+++++ +..++.++.+++|.++...+..++.
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~~~---------------------------~~~~~~~~~l~~~~~~~~~~~~~~~ 228 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGEPS---------------------------HQKQNTFRLLQRPGVMAGMIAIFMS 228 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcccc---------------------------cchhHHHHHhcCHHHHHHHHHHHHH
Confidence 9999887766655444444444321110 0112345778899988877766666
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHH
Q 009978 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
.........+.++++.+.+|+++.+.+......+++..++.++.+++.||.+++ .+...........++..
T Consensus 229 ~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~---------~l~~~~~~~~~~~~~l~ 299 (394)
T PRK10213 229 FAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL---------ALAGAPLVLAVSALVLT 299 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh---------HHHHHHHHHHHHHHHHH
Confidence 666666666764444445799999999999999999999999999999985433 22222222222222222
Q ss_pred hccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 009978 417 TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSL 496 (521)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 496 (521)
...++.+......++.+...+...+.......+..|++++++.++.....++|..+|+.+.|.+.|..| +...+...++
T Consensus 300 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~ 378 (394)
T PRK10213 300 LWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGT 378 (394)
T ss_pred HHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHH
Confidence 223333333333333333334455555555666667777888888888889999999999999999887 7777777766
Q ss_pred HHHHHHH
Q 009978 497 LYFLSAL 503 (521)
Q Consensus 497 ~~~~~~~ 503 (521)
+.++..+
T Consensus 379 ~~~~~~~ 385 (394)
T PRK10213 379 LMLLTAL 385 (394)
T ss_pred HHHHHHH
Confidence 5544433
No 15
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=6e-36 Score=300.13 Aligned_cols=392 Identities=17% Similarity=0.140 Sum_probs=284.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHH
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~ 176 (521)
+++.+.......+........+.+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34555555666667777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh------
Q 009978 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS------ 250 (521)
Q Consensus 177 ~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~------ 250 (521)
+.++++++ ++++.+++.|++.|++.+.. .....++.+++|+++|++++++.....++|..+++.+.+.+..
T Consensus 114 ~~~~~~~~--~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 114 AVFCMSLV--SSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHh--cCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99888888 89999999999999998764 4456789999999999999999988877888777766655432
Q ss_pred ---ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHH
Q 009978 251 ---QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (521)
Q Consensus 251 ---~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (521)
..|||+.|++.+++.++..++.+++.++.|+... ++.+ + +.+.++.+....+++.++++++|
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~----~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~ 255 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNY----RELK---K--------SGTMPKDSFSKVLRYGVTNYRTW 255 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCch----hhHH---h--------cCccccccHHHHHHHHHcCchhH
Confidence 2489999999999888776666665544443210 0000 0 00001111123456778899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
.+.+..++.......+..+.|.|+.+.+|++..+++.+.++..++..+++++.|+++||+++|.... .|+........
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~--~r~~~~~~~~~ 333 (476)
T PLN00028 256 ILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR--GRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc--hhHHHHHHHHH
Confidence 8888777666666777888999998878999999999999999999999999999999999863211 12223333333
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009978 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSF 487 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 487 (521)
+.++..+.+...++.......+++.........+....+..+..|+++|++.|+.+....+|.+++|.+.+ .+..++|
T Consensus 334 l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y 411 (476)
T PLN00028 334 LGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYST 411 (476)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH--hcCCccH
Confidence 33333333333333333332222222222223334445556677889999999998877777777776654 2223458
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Q 009978 488 QGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
...|.+.+++.+++.++.++.+.
T Consensus 412 ~~~f~~~~~~~~i~~~~~~~~~~ 434 (476)
T PLN00028 412 ETGISLMGVMIIACTLPVAFIHF 434 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHheec
Confidence 89999998888888877776653
No 16
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4.9e-36 Score=294.25 Aligned_cols=357 Identities=13% Similarity=0.171 Sum_probs=273.8
Q ss_pred hhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHH
Q 009978 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (521)
Q Consensus 116 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 195 (521)
...++.+|.+.+|+|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.++++++ ++++.+++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a--~~~~~ll~~ 103 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY--PQSALLLSS 103 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC--cchHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-CchhHHHHHHHHHHHHHHHHHH
Q 009978 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVLVWLS 274 (521)
Q Consensus 196 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gw~~~f~~~~~~~~i~~i~~~~ 274 (521)
|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||+.+.+.++..++..+..+.
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 182 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWW 182 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 78999999999999999999999999998875 8999887776665544333333
Q ss_pred hcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 275 ATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFV 354 (521)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 354 (521)
..++.|++++ ++ +. ..++.+++|+.|...+..++....+.....|.|.|+++
T Consensus 183 ~~~~~~~~~~--------------------~~---~~----~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~- 234 (393)
T PRK09705 183 QSAREVASSH--------------------KT---TT----TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE- 234 (393)
T ss_pred HhcCCCcccc--------------------CC---Cc----CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 3222221110 00 00 11244567788877777777777888889999999988
Q ss_pred hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHH
Q 009978 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT-AAKSPVMASAWLTLAI 433 (521)
Q Consensus 355 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 433 (521)
+|++..+++...++..++.++++++.+++.||+++|+ ... .+..+..+....+. ...+... ....+.+.
T Consensus 235 ~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~-------~~~--~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~ 304 (393)
T PRK09705 235 IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK-------LLM--LALVLQLVGFCGFIWLPLQLPV-LWAMVCGL 304 (393)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH-------HHH--HHHHHHHHHHHHHHHccchHHH-HHHHHHHH
Confidence 7999999999999999999999999999999998872 222 22222222222221 1222221 11222333
Q ss_pred HHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhccCc
Q 009978 434 GMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (521)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (521)
+.....+...........| +++|+.+|+.+...+++..++|.+.|++.|..|++...|.+.+++.+...++.+.++.++
T Consensus 305 g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 305 GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3333333222233344444 588999999999999999999999999999998889999988888777776665555444
Q ss_pred c
Q 009978 513 R 513 (521)
Q Consensus 513 ~ 513 (521)
+
T Consensus 385 ~ 385 (393)
T PRK09705 385 F 385 (393)
T ss_pred c
Confidence 3
No 17
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.9e-35 Score=290.76 Aligned_cols=377 Identities=15% Similarity=0.134 Sum_probs=285.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHH
Q 009978 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (521)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~ 175 (521)
+|++....+++.+++........++..|++.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35666777778888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh-ccCc
Q 009978 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGI 254 (521)
Q Consensus 176 ~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gw 254 (521)
++.++++++ ++++.+++.|+++|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+.. ..||
T Consensus 84 i~~~l~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 84 LAVAGLMFS--HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHc--chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 999999988 8999999999999999998888899999999999999999999999999999999999888764 5799
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHH
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 334 (521)
|+.|++.+++.++..++.++. +.|+.+++.++ + +++..+ . ..++.++...+..+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~----------------~---~~~~~~----~-~~~~~~~~~~~~~~ 215 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFS--EFPALGKHAPK----------------A---DKPVAK----E-KWGIGVLFLAIAAL 215 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCccccccCcc----------------c---cCcccc----c-cCChHHHHHHHHHH
Confidence 999999888776655444332 22221110000 0 000000 0 12456677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHH
Q 009978 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (521)
+.....+.+..|.|.|+++.+|+++.+.+.+.+...++..+++++.+++.||+++|+. .. ....+..+.+.
T Consensus 216 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-------l~--~~~~~~~~~~~ 286 (394)
T PRK03699 216 LYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRI-------LT--VLAGLALVLMY 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH-------HH--HHHHHHHHHHH
Confidence 7777778889999999988889999999999999999999999999999999998831 22 22222222233
Q ss_pred HHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 009978 415 GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLT 494 (521)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 494 (521)
.+...++........+..+...+...+.......+..|+.+++..|......++|..++|.+.|++.|..| +...++..
T Consensus 287 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~ 365 (394)
T PRK03699 287 LFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTA 365 (394)
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhh
Confidence 33333333322222222222223333444455566667777888899999999999999999999999988 77887777
Q ss_pred HHHHHHHHHHHHHhcc
Q 009978 495 SLLYFLSALFYIIFST 510 (521)
Q Consensus 495 ~~~~~~~~~~~~~~~~ 510 (521)
+++.+++.++.....+
T Consensus 366 ~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 366 NGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777666555444433
No 18
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=4.5e-35 Score=283.88 Aligned_cols=383 Identities=12% Similarity=0.103 Sum_probs=287.4
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhh-hhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHH
Q 009978 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (521)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~ 171 (521)
.++-.++.+.+..+..++.+..+.++++..+.+.+ ++|+|++|.+++.+++.+++.++.++.|++.||+|.|+++.++.
T Consensus 28 ~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ 107 (462)
T PRK15034 28 GKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFST 107 (462)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 33445667888888888999999999999999876 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcc---ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 172 ALWSLATFLTPWAA---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 172 ~~~~~~~~l~~~~~---~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
++.++.+++.+++. .++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999998887641 26899999999999998 668899999999999999999999999877778877776666543
Q ss_pred h-----h-------------ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCC
Q 009978 249 M-----S-------------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKP 310 (521)
Q Consensus 249 ~-----~-------------~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (521)
. . ..+||.++++.+++.++..++.++..++.++.+
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~--------------------------- 239 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSR--------------------------- 239 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc---------------------------
Confidence 3 2 234777777887777776666666544433211
Q ss_pred CCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhc
Q 009978 311 ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (521)
...++.++.+|+|+.|.+.+.+++.+..+.++..++|.|.++.+ +.........+..+...+.++++|+++||+|++
T Consensus 240 -~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~ 316 (462)
T PRK15034 240 -ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV 316 (462)
T ss_pred -cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch
Confidence 12245668999999999999999999999999999999998854 333333334445677888899999999999988
Q ss_pred CCCcchhHHHHHHHHHHHHHH-HHHHHhcc---chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc-------------
Q 009978 391 GTSVTLTRKILQSIGFIAPGI-ALIGLTAA---KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ------------- 453 (521)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 453 (521)
+ ............. ..+..... .+.+.....++......+......+-.+....|+
T Consensus 317 ~-------vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~ 389 (462)
T PRK15034 317 R-------VTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSD 389 (462)
T ss_pred H-------HHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccch
Confidence 2 2222221111111 11111111 1233333333333344455555555555555552
Q ss_pred ---------chhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhccCcc
Q 009978 454 ---------YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTGER 513 (521)
Q Consensus 454 ---------~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (521)
+.|.+.|+....+.+|+++.|.+.|...+..|++...|+...+..++++++.+....++.
T Consensus 390 ~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 390 EQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 678899999999999999999999999999999999999999888888877666544433
No 19
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-36 Score=276.70 Aligned_cols=386 Identities=18% Similarity=0.227 Sum_probs=322.1
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH
Q 009978 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (521)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~ 173 (521)
++.+++.+.+..+....++..+.+++++.+.+.+++++|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 44456777778888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcc-ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc
Q 009978 174 WSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (521)
Q Consensus 174 ~~~~~~l~~~~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 252 (521)
..+-.+..+++. .++++.+++.+++.|++ |.........++.|+|++++|.++|+.. ..++|..+...++..++...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 999988887773 24567999999999999 5558889999999999999999999999 99999999999999999988
Q ss_pred C---chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCC-chHHHHHhcchHHH
Q 009978 253 G---IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI-PPFRRLLSKMPTWS 328 (521)
Q Consensus 253 g---w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 328 (521)
+ |+.+..+..+..++..++.++...+.|+.+... ++.. .+++.++++++.|.
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~------------------------~~~~~~~~~~v~~~~~~W~ 222 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV------------------------KPQLPAQLKAVFSNKDTWL 222 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc------------------------cccchhHHHHHhcCcchHH
Confidence 9 999999999988888888888877776642211 1111 56778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHH
Q 009978 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (521)
Q Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (521)
+.+.++....++.++..++|.|+++++|.++.+++.......+.+.+.++++|+++||+|.++ ..........
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r-------v~~~~f~~~~ 295 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR-------VTLAVFVGMA 295 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchh-------HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999883 2332222222
Q ss_pred HHHHHHHHhcc-----chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhc
Q 009978 409 PGIALIGLTAA-----KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (521)
Q Consensus 409 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 483 (521)
.+...+.+... .+.......++....+.+......+-.+....|++.|.+.|+...++.+|++.-|...|...+.
T Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~ 375 (417)
T COG2223 296 LAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDL 375 (417)
T ss_pred HHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHh
Confidence 22222222221 2334444444555556677777778888889999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCc
Q 009978 484 VGSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (521)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (521)
+|++...|++...+.+++.+..+....++
T Consensus 376 tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 376 TGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999988888887665554433
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=7.8e-35 Score=294.06 Aligned_cols=374 Identities=17% Similarity=0.146 Sum_probs=287.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHH
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~ 176 (521)
+|..+..+++..++...+.+.++..+|.+.+++|.+..+.+|+.+.+.++..++.+++|+++||+|||++++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcC-CchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCch
Q 009978 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (521)
Q Consensus 177 ~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~ 255 (521)
+.++++++ +|++.++++|+++|+|.+...+.....+.+++ |+++|++++|++.....+|..+||.+++++.+++|||
T Consensus 84 ~~~~~~~a--~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr 161 (495)
T PRK14995 84 ASLAAAFS--PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161 (495)
T ss_pred HHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence 99999999 99999999999999999998888888887776 6789999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CchhHHHH----------HHHhhcccc-cc------------------C
Q 009978 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEY----------ILREKQKPL-LM------------------G 305 (521)
Q Consensus 256 ~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~-~~------------------~ 305 (521)
+.|++...+.++..++..+..|++++++.+ .+..+... ..+...... .. .
T Consensus 162 ~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~ 241 (495)
T PRK14995 162 SVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIR 241 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999998888777766666666665433221 11111000 000000000 00 0
Q ss_pred CCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHH
Q 009978 306 NKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (521)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (521)
.+.+.+.+..+ .+++|+|.++...+..++......+...+.|.|+++.+|+++.+++.......++..++.++.|++.|
T Consensus 242 ~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~ 320 (495)
T PRK14995 242 TQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVS 320 (495)
T ss_pred HHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111222223 36889999988888888888888888889999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHHHHHHHHHHHHH---hccchhHHHH-HHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhH
Q 009978 386 MLIQRGTSVTLTRKILQSIGFIAPGIALIGL---TAAKSPVMAS-AWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGI 461 (521)
Q Consensus 386 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 461 (521)
|+++| .....+.....+....+ ....+.+... ..++.+.+.+....+.........++++++.+.++
T Consensus 321 r~g~~---------~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~ 391 (495)
T PRK14995 321 RLGLR---------LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAI 391 (495)
T ss_pred HcCch---------HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHH
Confidence 99987 22233333333322222 1222333222 23333444443333444445555566799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 009978 462 SNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 462 ~~~~~~~g~~~~~~~~g~l~~ 482 (521)
.++..++|+.+|+.+.|.+.+
T Consensus 392 ~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 392 ETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998865
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=7.8e-35 Score=289.66 Aligned_cols=378 Identities=16% Similarity=0.120 Sum_probs=266.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhc---CCcchhhHHH---HHHHHHHHHhhhhhHHHHhHhcchHHHHH
Q 009978 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHG---WSRSFSGIVQ---SSFLWGYLVSPIAGGTLVDYYGGKIIMAW 169 (521)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~g~~~---s~~~~~~~i~~~~~G~l~dr~Grr~~~~~ 169 (521)
+++..+...+++.++++++...++...|.+.++++ .+..+.+... +...++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45566777778899999999999999999999984 4555444444 44455555999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccccchH--------HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHH
Q 009978 170 GVALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (521)
Q Consensus 170 ~~~~~~~~~~l~~~~~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 241 (521)
+.+++++++++++++ +++. .+++.|+++|++.|...+...+++.|++|+++|+++.++...+...|.+++
T Consensus 99 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 99 SVCMMCFGSLVIACL--PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999988 6653 588999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHhh--------hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCC
Q 009978 242 LVLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATV 313 (521)
Q Consensus 242 ~~l~~~l~--------~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (521)
+.+...+. +.+|||++|++.+++.++... .....||+++. +.+ .. ..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~-------~~~------------~~-----~~ 231 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ-------ETR------------AL-----KE 231 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH-------HHh------------hh-----cc
Confidence 87765543 257999999987776655432 22223333211 000 00 01
Q ss_pred CchHHHHHhcchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 009978 314 IPPFRRLLSKMPTWSIIVANAMH-SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT 392 (521)
Q Consensus 314 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~ 392 (521)
..++++++++|+.+...+...+. ...++.+..|+|.|+++.+|++..+.+...++..+...++.++.|++.||++||+
T Consensus 232 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~- 310 (432)
T PRK10406 232 AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRT- 310 (432)
T ss_pred cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-
Confidence 12567888888887766655443 5667788899999998878999888888888888888888999999999999882
Q ss_pred CcchhHHHHHHHHHHH--HHHHHHH-HhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHH
Q 009978 393 SVTLTRKILQSIGFIA--PGIALIG-LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTF 468 (521)
Q Consensus 393 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 468 (521)
... ...... ....... ....++....+....+..+..+...+....+..|..| +.|+++.|+.+...++
T Consensus 311 ------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 311 ------SML-CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred ------HHH-HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 121 111111 1111111 1112222222222222222333333445566778887 5899999999988774
Q ss_pred -HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 469 -AAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 469 -g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
.+...|.+.+.+ +..|.+...+++.++..+++.+..+++.
T Consensus 384 ~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l~ 424 (432)
T PRK10406 384 LFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLH 424 (432)
T ss_pred HHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 345577777754 5566676677776666666666555543
No 22
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1e-34 Score=287.21 Aligned_cols=365 Identities=13% Similarity=0.057 Sum_probs=279.4
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH
Q 009978 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (521)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~ 173 (521)
+++.+.....+.+..+...+....+.+.+|.+.+++|.++.+.++..+.+.+++.+++++.|+++||+|||+++.++.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 34556666777777888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 174 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
.+++.+++.++ ++++.+++.|+++|++.+...+...+.+.|++|+++|.+++++......+|..+||.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLA--QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHH--ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999988888 8999999999999999998888999999999999999999999998888999999999999999899
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHH
Q 009978 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (521)
Q Consensus 254 w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 333 (521)
||+.|++.+++.++..+..++..||++++.++. .+.++..++++.++++|.++...+..
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEK---------------------LSLKELGRDYKLVLKNRRFVAGALAL 224 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc---------------------ccHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 999999988887776665555555543221100 00011223566888999999888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHH--H
Q 009978 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPG--I 411 (521)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~ 411 (521)
++.......+..+.|.++.+.+|+++.+.+.......++..++.++.+++.||+++|+ ....+.+... .
T Consensus 225 ~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~---------~~~~~~~~~~~g~ 295 (406)
T PRK15402 225 GLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRS---------LIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHH
Confidence 7776666667777899988888999998888877777888899999999999998872 2222222222 2
Q ss_pred HHHHHh---ccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009978 412 ALIGLT---AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (521)
Q Consensus 412 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 488 (521)
..+... ...+.+......++.....+...+..........++++|++.+.++....++..+|+.+.+.+.+..+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 375 (406)
T PRK15402 296 LLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGL 375 (406)
T ss_pred HHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Confidence 222221 11222222222222222222333333334444556899999999999999999999999999999877444
Q ss_pred HH
Q 009978 489 GF 490 (521)
Q Consensus 489 ~~ 490 (521)
..
T Consensus 376 ~~ 377 (406)
T PRK15402 376 FN 377 (406)
T ss_pred HH
Confidence 33
No 23
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.5e-35 Score=290.67 Aligned_cols=365 Identities=18% Similarity=0.181 Sum_probs=277.2
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~ 183 (521)
..+...+.......+++..|.+.+++|+|+.+.|++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~ 87 (377)
T TIGR00890 8 GTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI 87 (377)
T ss_pred HHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH
Confidence 33344444444667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
+ ++++.+++.|++.|++.+...+.....+.+++| ++|+++.++...+.++|..+++++.+.+.+..|||+.|++.++
T Consensus 88 ~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~ 164 (377)
T TIGR00890 88 A--DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGI 164 (377)
T ss_pred H--HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHH
Confidence 8 999999999999999999888888889999996 6899999999999999998888788788788899999999998
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (521)
+.++..+..++..+++++++... +.+.+....+.++.+++|.++...+..++........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (377)
T TIGR00890 165 IFLLVIVLGAFLIGYPPGQLIKT--------------------NIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLL 224 (377)
T ss_pred HHHHHHHHHHHheecCchhcccc--------------------CcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHH
Confidence 88877666665555433221100 0000111124567888999888877777766666666
Q ss_pred HHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccch--
Q 009978 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS-- 421 (521)
Q Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 421 (521)
..+.+.|.++ +|.+..+.+...+...++..+++++.+++.||+++|+ ....+.....+..+.+...+.
T Consensus 225 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T TIGR00890 225 IGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK---------TMSIVFGISAVGMAAMLFIPMLN 294 (377)
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---------hhhHHHHHHHHHHHHHHHcccch
Confidence 6777777766 7888888899999999999999999999999999883 222233333333332322221
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 009978 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFL 500 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 500 (521)
....+...++.....+...+.......+..| ++++++.|+.+....+|..++|.+.|.+.|..| +...|.+.+++.++
T Consensus 295 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 295 DVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALT 373 (377)
T ss_pred hHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHH
Confidence 2222122222222222333344455556655 689999999999999999999999999999987 88898888877666
Q ss_pred HH
Q 009978 501 SA 502 (521)
Q Consensus 501 ~~ 502 (521)
+.
T Consensus 374 ~~ 375 (377)
T TIGR00890 374 SL 375 (377)
T ss_pred hc
Confidence 54
No 24
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=7.2e-35 Score=285.40 Aligned_cols=373 Identities=17% Similarity=0.169 Sum_probs=279.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l 180 (521)
+..+.+..+..........+.+|.+.+++|.+..+.|++.+++.++..++++++|+++||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 44455666777777778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHH
Q 009978 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (521)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~ 260 (521)
++++ ++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++++++++.+..|||+.|++
T Consensus 85 ~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLS--SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHh--CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 9999 99999999999999999988888899999999999999999999999999999999999999998999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHH
Q 009978 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (521)
Q Consensus 261 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 340 (521)
.+++.++..+..++..||.+++.+. +..+. .+.++++..|......++.....
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~~--------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 215 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAKG--------------------------GLREQ-FHFLRSPAPWLIFAATMFGNAGV 215 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccc--------------------------CHHHH-HHHhcChHHHHHHHHHHHHHHHH
Confidence 9888776665555555554321100 00011 24567777777666555555555
Q ss_pred HHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh-cc
Q 009978 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT-AA 419 (521)
Q Consensus 341 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 419 (521)
.....+.+.++.+.+|+++.+.+++.+...++..+++++.+++.||+++++ ....+..+.++..+.+. ..
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~---------~~~~~~~~~~i~~~~~~~~~ 286 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR---------IAAVTDFIIVLALLMLFFFG 286 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh---------HHHHHHHHHHHHHHHHHHHH
Confidence 556677788888778999999999999999999999999999999998872 22222233333322221 12
Q ss_pred chhHHHHH-HHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 009978 420 KSPVMASA-WLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL 497 (521)
Q Consensus 420 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (521)
+..+.... ..+.+.+..+...+.......+..+ +.++.+ ..+....+|..+||.+.|.+.|..++|...+.+.+++
T Consensus 287 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~ 364 (382)
T PRK10091 287 GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALL 364 (382)
T ss_pred hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHH
Confidence 22222222 2222333333333333333334333 344443 3467788999999999999999766699999988877
Q ss_pred HHHHHHHHHHhccCcc
Q 009978 498 YFLSALFYIIFSTGER 513 (521)
Q Consensus 498 ~~~~~~~~~~~~~~~~ 513 (521)
.++.+.....+.++|+
T Consensus 365 ~~~~~~~~~~~~~~~~ 380 (382)
T PRK10091 365 SFAAMSSLLLYGRYKR 380 (382)
T ss_pred HHHHHHHHHHHhhhhc
Confidence 7777666655554444
No 25
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.6e-34 Score=291.55 Aligned_cols=392 Identities=16% Similarity=0.111 Sum_probs=266.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcch-hhH-----HHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHH
Q 009978 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSF-SGI-----VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~-----~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~ 171 (521)
++.+....++.++++++...++...|.+.++++.+.++ .++ +.++..++..++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34566777899999999999999999999998644322 122 247788999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccccchHH--------HHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHH
Q 009978 172 ALWSLATFLTPWAADTSLLA--------LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLV 243 (521)
Q Consensus 172 ~~~~~~~~l~~~~~~~~~~~--------l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 243 (521)
++++++.++++++ ++++. ++++|+++|++.|...+...+++.|++|+++|+++.++...+..+|..+|+.
T Consensus 95 ~l~~i~~~~~a~~--~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 95 VIMSISTFCIGLI--PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 88764 8899999999999999999999999999999999999999888888888887
Q ss_pred HHHHhh--------hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCc
Q 009978 244 LSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIP 315 (521)
Q Consensus 244 l~~~l~--------~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (521)
+...+. ..+|||+.|++.+++.++.. +.....||+|+.... .+...+. . . +...+....
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp~~~~~-----~~~~~~~-~-----~-~~~~~~~~~ 239 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETPAFQQH-----VDKLEQG-D-----R-EGLQDGPKV 239 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCChhHHHH-----HHhhhhh-c-----c-ccccccccC
Confidence 665543 25799999999776555433 333445555432110 0000000 0 0 000011223
Q ss_pred hHHHHHhc-chHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 316 PFRRLLSK-MPTWS-IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (521)
Q Consensus 316 ~~~~~~~~-~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (521)
++++++++ ++.+. .....++....++.+..|+|.|+++.+|++..+.++......++..++.++.|++.||+|||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-- 317 (490)
T PRK10642 240 SFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRP-- 317 (490)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH--
Confidence 45566653 22222 223334455677788889999998878998887777777778888999999999999999982
Q ss_pred cchhHHHHHHHH-HHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHH
Q 009978 394 VTLTRKILQSIG-FIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAI 471 (521)
Q Consensus 394 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~ 471 (521)
....... ..+.....+.....++........++.....+........+..+..| +.|+++.|+.+....+++.
T Consensus 318 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~ 392 (490)
T PRK10642 318 -----FVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAG 392 (490)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHH
Confidence 1211111 11111111222222222222222222222222333344455556666 6899999987777778889
Q ss_pred HHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhccC
Q 009978 472 LGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 472 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (521)
++|.+.|++.+..+++...+.+..+..+++.+..++.++.
T Consensus 393 ~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes 432 (490)
T PRK10642 393 LTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKET 432 (490)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999876655555555555555555555555443
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=9.5e-35 Score=289.58 Aligned_cols=369 Identities=14% Similarity=0.142 Sum_probs=268.9
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+.+++.+..+.+.++.+.++.....+..|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45566677888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
+++.++++++ ++++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.+.+.+.+.++|
T Consensus 94 ~~~~~~~~~~--~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 94 SVGTGLSGLA--SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 9999999998 99999999999999999999999999999999999999999999999999999999999999898999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHH
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 334 (521)
|+.|++..+..++. +......||+++. ++ +...++ . ...+...+.....+++++++|.++...+...
T Consensus 172 ~~~f~i~~~~~~~~-~~~~~~~p~~~~~------~~-~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (426)
T PRK12307 172 RAAFFVGLLPVLLV-IYIRARAPESKEW------EE-AKLSGK-G----KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFI 238 (426)
T ss_pred HHHHHHHHHHHHHH-HHHHHHCCCChHH------HH-hhhhcc-c----cccccchhhhhHHHHHHHhhchHHHHHHHHH
Confidence 99998755433222 1111112222110 00 000000 0 0000111112235678888888765443322
Q ss_pred H---HHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH
Q 009978 335 M---HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (521)
Q Consensus 335 ~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (521)
. .......+..++|.|+++ .|.++.+.+...+...++..+++++.+++.||+++|+ ....+.....+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~---------~~~~~~~~~~~ 308 (426)
T PRK12307 239 VLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK---------TFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH---------HHHHHHHHHHH
Confidence 2 223334467789999988 6999989998889999999999999999999999872 22223222222
Q ss_pred HHHHHh-ccchhHHHHHHHHHHHHHHh-hhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009978 412 ALIGLT-AAKSPVMASAWLTLAIGMKS-FSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (521)
Q Consensus 412 ~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 488 (521)
..+.+. ........+...+++.+... ...+.......+..| +.+|++.|+......+++.++|.+.|++.+..| +.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~ 387 (426)
T PRK12307 309 FIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LG 387 (426)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HH
Confidence 222221 11222222222222222221 112233344556666 689999999999999999999999999999887 54
Q ss_pred H
Q 009978 489 G 489 (521)
Q Consensus 489 ~ 489 (521)
.
T Consensus 388 ~ 388 (426)
T PRK12307 388 A 388 (426)
T ss_pred H
Confidence 4
No 27
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=7.9e-35 Score=288.49 Aligned_cols=388 Identities=14% Similarity=0.121 Sum_probs=275.5
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHH
Q 009978 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (521)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~ 172 (521)
.++++|+.+..+.+.++.+.++....++..|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 34567888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc
Q 009978 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (521)
Q Consensus 173 ~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 252 (521)
+.+++.+++++. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..
T Consensus 86 ~~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 86 LFSAGTLACGFA--PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHh--ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999888 899999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C--chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCch-hHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcc--hHH
Q 009978 253 G--IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISK-YELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKM--PTW 327 (521)
Q Consensus 253 g--w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 327 (521)
+ ||+.|++.++..++..+ .....||+++..+..++ ++.....++..+... ..+...+......++..+++ .+.
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMVDILYGGEH-RIANIVMTLAAAMVQSAGKRWPTFV 241 (405)
T ss_pred CccHHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHHHHHhccch-hhhhhhhhhhHHhhhhhhhhhHHHH
Confidence 6 99999886665554433 33334444321111000 000000000000000 00000000011111111111 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
...+...+..........+.|.|+.+.+|++..+.+.+.+...++.++++++.+++.||+++|+. ...+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~---------~~~~~~ 312 (405)
T TIGR00891 242 YLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKA---------YVCSLL 312 (405)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhh---------hHHHHH
Confidence 23333333344455667788999988889999999999999999999999999999999998832 122222
Q ss_pred HH-HHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 408 AP-GIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 408 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
.. ......+...++.+.......+.........+.......+..| +++|++.|+.+...+++..++|.+.|.+.|..|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 313 AGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22 1111122222333332222222222223333444455566666 689999999999999999999999999999988
Q ss_pred chHHHHHH
Q 009978 486 SFQGFLLL 493 (521)
Q Consensus 486 ~~~~~~~~ 493 (521)
+|...+..
T Consensus 393 ~~~~~~~~ 400 (405)
T TIGR00891 393 EYGTALAS 400 (405)
T ss_pred ccchhHHh
Confidence 77665544
No 28
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=4.1e-35 Score=292.60 Aligned_cols=397 Identities=16% Similarity=0.135 Sum_probs=286.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
.++|.++..+.+...........++...|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 44577777777777666666677888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHH-HHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 175 SLATFLTPWAADTSLLALLA-MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~-~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
+++.++++++ ++++.+++ .|++.|++.+...+...+++.++++ ++|+++.++.+.+..+|..++|++++.+.+.+|
T Consensus 95 ~~~~~~~~~~--~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 95 SLGMILASFS--SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHHHh--hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 9999998888 88888765 5799999998777777888999995 789999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCC-C--CCCCCCCchHHHHHhcchHHHHH
Q 009978 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGN-K--HKPATVIPPFRRLLSKMPTWSII 330 (521)
Q Consensus 254 w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~ 330 (521)
||+.|++.+++.++..+..++..++.+..+....+++ +. .+......... . .++.....++ +++++|.++...
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 247 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK-EG--LPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYL 247 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc-cc--CCCCCccccccccchhhhhhhhcch-HHhcCchHHHHH
Confidence 9999999998877665554444433221110000000 00 00000000000 0 0000011112 577899999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHH
Q 009978 331 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPG 410 (521)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 410 (521)
+..++...+......++|.|+++ .|++..+++++.++.+++.++++++.+++.||...++. +...+..+....+
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~ 321 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNG 321 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHH
Confidence 88887777777888899999987 79999999999999999999999999999997321100 1222233333333
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhh-ccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009978 411 IALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQG 489 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 489 (521)
+..+.....++.+..+...++.+...+...+.......+.. +++++++.|+++...++|.++||.+.|.+.|..|+|..
T Consensus 322 l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 401 (455)
T TIGR00892 322 LTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKY 401 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcch
Confidence 33333333344443333333322233333444445555554 46899999999999999999999999999998877888
Q ss_pred HHHHHHHHHHHHHHH
Q 009978 490 FLLLTSLLYFLSALF 504 (521)
Q Consensus 490 ~~~~~~~~~~~~~~~ 504 (521)
.|.+.+++.+++.+.
T Consensus 402 ~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 402 IFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHhhHHHHHHHHH
Confidence 888888776666553
No 29
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=279.23 Aligned_cols=373 Identities=20% Similarity=0.182 Sum_probs=265.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhh-hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 177 (521)
+.+..+.+..++..+...+..+.+|. +.+++|.|+.+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 34555666777777778888888887 56789999999999999999999999999999999999999999999988877
Q ss_pred Hhhhhhcc------ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc
Q 009978 178 TFLTPWAA------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (521)
Q Consensus 178 ~~l~~~~~------~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 251 (521)
.+.+.++. ..+++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|.++|+.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 66554431 025678899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHH
Q 009978 252 AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIV 331 (521)
Q Consensus 252 ~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 331 (521)
+||+..+++.++..++..+.. . +.|+.++.. + ...++++.++ .++....
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~--~-----------------------~~~~~~~~~~--~~~~~~~ 223 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLA-R---PRPAVPPVK--G-----------------------ERLPFRRVLG--RVWPYGM 223 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHH-h---cCCCCCCCC--c-----------------------cchhHHHHHH--HHHHHHH
Confidence 999998887666544332222 1 112111100 0 0012223332 2222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH
Q 009978 332 ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (521)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (521)
...+....+.....+.+.|+.+ .|+ .+.+.......++.++++++.+++.||+++|+ ....+....++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~---------~~~~~~~~~~~ 291 (399)
T PRK05122 224 GLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLR---------VAIVSLLVEIL 291 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHH---------HHHHHHHHHHH
Confidence 3333445556667788888876 465 34566667788888999999999999998772 22233333333
Q ss_pred HHHHHhccchhHHHHHHHH-HHHHHHhhhhhhhHHH-HHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009978 412 ALIGLTAAKSPVMASAWLT-LAIGMKSFSHSGFLVN-LQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQG 489 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 489 (521)
....+...++.+..+...+ .+.+.. ...+..... ....+++++|++.|+++....+|..+++.+.|.+.+..| ++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~ 369 (399)
T PRK05122 292 GLLLLWLAPSPWMALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPS 369 (399)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHH
Confidence 3333333344433333222 333332 333333333 344445799999999999999999999999999999887 899
Q ss_pred HHHHHHHHHHHHHHHHHHhccCccccc
Q 009978 490 FLLLTSLLYFLSALFYIIFSTGERVNF 516 (521)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (521)
.+++.+++.+++.++...++++++++.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T PRK05122 370 IFLAAALAALLGLALTWLLYRRAPRAV 396 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccC
Confidence 999988888888777766665555443
No 30
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=2e-33 Score=276.99 Aligned_cols=377 Identities=14% Similarity=0.099 Sum_probs=271.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhh
Q 009978 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (521)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~ 182 (521)
...++.+............++.+.+++|.++.+.|++.+.+.++..+++++.|+++||+||||++..+.++.+++.+++.
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~ 96 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFI 96 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444566777789999999999999999999999999999999999999999999999888876542
Q ss_pred h-cc-ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhh-HHHHHHHHHhhhccCchhHHH
Q 009978 183 W-AA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGN-AIGLVLSPILMSQAGIFGPFV 259 (521)
Q Consensus 183 ~-~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~gw~~~f~ 259 (521)
. .. .++++.+++.|++.|++.+...+...+.+.+++|+++|++++|+.+.+.++|. .++|++++++.+.+||+..++
T Consensus 97 ~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~ 176 (402)
T TIGR00897 97 VFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLW 176 (402)
T ss_pred HHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 1 11 15788889999999999888888888889999999999999999999999997 689999999988889776666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHH
Q 009978 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (521)
Q Consensus 260 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 339 (521)
......++..++..+..++.++++... + +++..+..+.++.++++|.++...+..++....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (402)
T TIGR00897 177 SALAFVLTGGVIALFSNKDIFTPQHMQ-T------------------REKFSELGKAATILFTNPNVLLGGMVRIINTIG 237 (402)
T ss_pred HHHHHHHHHHHHHHhccCCCCCccccc-C------------------CcchhhHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 554443333333344444332211100 0 000111123466788999999888888888788
Q ss_pred HHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHH--HHHHHHHHHHHHHHh
Q 009978 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQ--SIGFIAPGIALIGLT 417 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 417 (521)
.+.+..+.|.|+++ +|++..+.+.......+++.+++++.|++.||+++|+. ... .+...+....+....
T Consensus 238 ~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-------~~~~~~l~~~~~~~~l~~~~ 309 (402)
T TIGR00897 238 LFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT-------VRWFGGVGCGIFTLALYYIP 309 (402)
T ss_pred HHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-------HHHHHHHHHHHHHHHHHHHH
Confidence 88889999999977 89999999988888899999999999999999997732 111 111111111111111
Q ss_pred --ccchhHHH-HHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 009978 418 --AAKSPVMA-SAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLT 494 (521)
Q Consensus 418 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 494 (521)
..++.+.. ...++.+.+... ..+ ......+..|+++|++.|+.+....++..++|.+.|.+.|..| +...+++.
T Consensus 310 ~~~~~~~~~~~~~~~~~G~~~~~-~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~ 386 (402)
T TIGR00897 310 QHFGHSFAVALIIAIALGIFLAG-YVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIF 386 (402)
T ss_pred HccCCcHHHHHHHHHHHHHHHHH-HHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHH
Confidence 11223222 222333333332 222 3344567778899999999999999999999999999999988 78888888
Q ss_pred HHHHHHHHHHHHHhc
Q 009978 495 SLLYFLSALFYIIFS 509 (521)
Q Consensus 495 ~~~~~~~~~~~~~~~ 509 (521)
+++.+++.++..+.|
T Consensus 387 a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 387 AALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHHHHHHHHHhc
Confidence 887777766665543
No 31
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=5.5e-33 Score=276.36 Aligned_cols=385 Identities=13% Similarity=0.068 Sum_probs=267.5
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhh-hhhhh--cCCcchhhHHH-----HHHHHHHHHhhhhhHHHHhHhcchHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVP-LSLAH--GWSRSFSGIVQ-----SSFLWGYLVSPIAGGTLVDYYGGKII 166 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~g~~~-----s~~~~~~~i~~~~~G~l~dr~Grr~~ 166 (521)
.++++.+....+..++++++...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 444567777888999999999999988775 45555 66666 45553 34556678899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhccccchH--------HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhh
Q 009978 167 MAWGVALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGN 238 (521)
Q Consensus 167 ~~~~~~~~~~~~~l~~~~~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 238 (521)
+.++.+++++++++++++ ++++ .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.
T Consensus 97 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 97 LMLTVWMMGIATALIGLL--PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred HHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999 8876 588899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh--------ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCC
Q 009978 239 AIGLVLSPILMS--------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKP 310 (521)
Q Consensus 239 ~~g~~l~~~l~~--------~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (521)
+++..+...+.. .+|||+.|++.++..++.. ......||+|+.. +.+ ++ .++ .
T Consensus 175 ~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l~~~~~es~~~~------~~~---~~-------~~~--~ 235 (438)
T PRK09952 175 LLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WVRNGMEESAEFE------QQQ---HE-------QAA--A 235 (438)
T ss_pred HHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH-HHHHhCCCChhHH------HHH---hh-------ccc--c
Confidence 998887776653 5799999998877654422 2222233332210 000 00 000 0
Q ss_pred CCCCchHHHHHhcchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHh
Q 009978 311 ATVIPPFRRLLSKMPTWSIIV-ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (521)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (521)
+......+.++++|+.+...+ ..++.....+....|.|.|+++.+|++...........++...++.++.|+++||++|
T Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~gr 315 (438)
T PRK09952 236 KKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGR 315 (438)
T ss_pred cccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 001122334667777666544 4455556677788899999988888887765555556667778888999999999998
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHH--HHH-h-ccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHH
Q 009978 390 RGTSVTLTRKILQSIGFIAPGIAL--IGL-T-AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNT 464 (521)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~ 464 (521)
|+ ... .+.+...+.. +.. . ..+..+..+...++.....+...+....+..|..| +.|+++.|+.+.
T Consensus 316 r~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~ 386 (438)
T PRK09952 316 RR-------VYI--TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQ 386 (438)
T ss_pred hH-------HHH--HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHH
Confidence 82 122 2222211111 111 1 11222222222333233333444556677778777 588999998766
Q ss_pred HHH-HHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 465 AGT-FAAILGTVGAGFFVELV-GSFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 465 ~~~-~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
... +++.++|.+.|++.|.. |+|...+.+.+++.+++.+..+..++
T Consensus 387 ~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 387 VASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 654 89999999999999865 35777788787777777777665543
No 32
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=5.6e-34 Score=284.04 Aligned_cols=403 Identities=18% Similarity=0.247 Sum_probs=283.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHH
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~ 176 (521)
++..+....+.+...+..+..+....|.+.+ +|.++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4566666667777777777777778887776 599999999999999999999999999999999999999999999988
Q ss_pred HHhhhhhcc--ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh-ccC
Q 009978 177 ATFLTPWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAG 253 (521)
Q Consensus 177 ~~~l~~~~~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~g 253 (521)
+.+++++.. .++++.+++.|++.|++.+...+.....+.|++|+++|++++++.+.+.++|..+++.+.+...+ ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 888766541 14677788999999999998889899999999999999999999999999999999888776544 568
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCch-HHHHHhcchHHHHHHH
Q 009978 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-FRRLLSKMPTWSIIVA 332 (521)
Q Consensus 254 w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 332 (521)
||+.|++.+++.++..+..++..+|+|++.+..+.++.+. +..++. .++.+++.+..+. .+..++++.+|...+.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN--DYPDDY--NEKAEQELTAKEIFMQYVLPNKLLWYIAIA 259 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc--cccccc--ccccccccchHHHHHHHHccCchHHHHHHH
Confidence 9999999998887766666666666554321111100000 000000 0000001111111 2346789999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHH--HH
Q 009978 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA--PG 410 (521)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~--~~ 410 (521)
.++.....+++..+.|.|+++..|+++.++++...+..+++++++++.|++.||+++++.. ......... .+
T Consensus 260 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~------~~~~~~~~~~~~~ 333 (438)
T TIGR00712 260 NVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG------ATGVFFMTLVTIA 333 (438)
T ss_pred HHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc------HHHHHHHHHHHHH
Confidence 7777777788889999999998899999999999999999999999999999999654211 111111111 11
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHHHhhhhhh-hHHHHHhhhc-cchhhHHhHHHHHHHHHH-HHHHHHHHHHhhcccch
Q 009978 411 IALIGLTAAKSPVMASAWLTLAIGMKSFSHSG-FLVNLQEIAP-QYSGVLHGISNTAGTFAA-ILGTVGAGFFVELVGSF 487 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~~g~-~~~~~~~g~l~~~~g~~ 487 (521)
...+......+.+.... ..+..+........ ......+..| +.+|++.|+.+...++++ +++|.+.|.+.|..| +
T Consensus 334 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~ 411 (438)
T TIGR00712 334 VIVYWMNPAGNPLVDMI-CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-W 411 (438)
T ss_pred HHHHHhcCCCchHHHHH-HHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-c
Confidence 11111111122222211 11222221111111 1223445555 689999999999988875 689999999999987 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCc
Q 009978 488 QGFLLLTSLLYFLSALFYIIFSTGE 512 (521)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (521)
...+.+..++.+++.+..+.+.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 412 DGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8888888777777776666555443
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=2.6e-33 Score=275.66 Aligned_cols=353 Identities=17% Similarity=0.176 Sum_probs=268.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh
Q 009978 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (521)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 179 (521)
.+..+.+..+........+.+..|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 85 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSL 85 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHH
Confidence 33444444555667777888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHH
Q 009978 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (521)
Q Consensus 180 l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~ 259 (521)
++.+. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|+
T Consensus 86 ~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 163 (385)
T TIGR00710 86 GLALS--NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFA 163 (385)
T ss_pred HHHHH--ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 99888 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHH
Q 009978 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (521)
Q Consensus 260 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 339 (521)
+.++..++..+..++..||.++++++.+ .+...+.+++.+++|.++...+...+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETLPYEARIQ----------------------ISTYFETFLLLLKSKMFWGYALIYGASFGG 221 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcccCC----------------------HHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 9888877766665555555433221100 011123456788899998888777777777
Q ss_pred HHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc-
Q 009978 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA- 418 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 418 (521)
......+.|.++++.+|.++.+.+.+.....++..++.++.+++.||+++|+ ..............++....
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 294 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS-------LLRMGLILFAVSAVLLEITAI 294 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 7778888899998889999999999999999999999999999999998872 22222211121111111111
Q ss_pred -c-chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhc
Q 009978 419 -A-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (521)
Q Consensus 419 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 483 (521)
. ...........+.....+...+.......+..|++++++.++.+.....++.+.+.+.+.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 295 LGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1 1122222222222222333344445555666678899999999999887666666667755443
No 34
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.2e-33 Score=274.02 Aligned_cols=365 Identities=16% Similarity=0.112 Sum_probs=273.1
Q ss_pred HHHHHhhhhhhhhhhhhh-hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHH-HHHHHHHHHhhhhhc
Q 009978 107 ALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW-GVALWSLATFLTPWA 184 (521)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~-~~~~~~~~~~l~~~~ 184 (521)
.+++..+......+.+|. +.+++|.|+.++|++.+++.+...+.+++.|+++||+||||.+++ +.++..++.++++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 455666666777787776 567899999999999999999999999999999999999887654 556666677778888
Q ss_pred cccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHH--HHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHH
Q 009978 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARA--VAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (521)
Q Consensus 185 ~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~ 262 (521)
++++.+++.|++.|.+.+...|...+++.|+.|+++|++. .+....+.++|..+||++++.+.+.+|||+.|++.+
T Consensus 85 --~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 85 --RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred --chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 8999999999999988888888888999999887777654 688888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHH
Q 009978 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (521)
Q Consensus 263 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 342 (521)
++.++..+..++..||.|+++++. + ...+.++.+++|.++...+..++.......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGA--------------------L-----TRLEVRGLLASRDTRLLFVACTLMWGCNIL 217 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCcccc--------------------c-----CcchhhhhhcCcchHHHHHHHHHHHHHHHH
Confidence 887777666666566654322100 0 011233466777777666666665555566
Q ss_pred HHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchh
Q 009978 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (521)
Q Consensus 343 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (521)
...+.|.|+++.+|.++.+.+.......+...++.++.+++.||+++|+ ....+.....+....+...++.
T Consensus 218 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~---------~~~~~~~~~~~~~~~~~~~~~~ 288 (375)
T TIGR00899 218 YIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR---------LMLLAALAGVAFYTGLAADNSL 288 (375)
T ss_pred HHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899988888999999998887777777888899999999999883 2222222222222222223333
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 009978 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA 502 (521)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (521)
+......++.....+...+....+..+..|++++++.++++...++|..++|.+.|.+.|..| +...|.+.+++.+++.
T Consensus 289 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~ 367 (375)
T TIGR00899 289 WALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVAL 367 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHH
Confidence 333333333233333444555666778888888899999999999999999999999999887 8899988888887777
Q ss_pred HHHHHh
Q 009978 503 LFYIIF 508 (521)
Q Consensus 503 ~~~~~~ 508 (521)
++....
T Consensus 368 ~~~~~~ 373 (375)
T TIGR00899 368 FCLLLI 373 (375)
T ss_pred HHHhee
Confidence 766544
No 35
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=6.8e-33 Score=279.65 Aligned_cols=373 Identities=13% Similarity=0.091 Sum_probs=276.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh
Q 009978 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (521)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 179 (521)
.+..+++..++..++...+.+..|.+.+++|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 35566677788888888889999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHH
Q 009978 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (521)
Q Consensus 180 l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~ 259 (521)
++.++ ++++.+++.|+++|++.+...+...+++.|++|+++|++++++.....++|..+||.+++.+.+..|||+.|+
T Consensus 91 ~~~~~--~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALS--GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHh--CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 88888 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHH----------HHhhcc-ccc------------------cCCCCCC
Q 009978 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYI----------LREKQK-PLL------------------MGNKHKP 310 (521)
Q Consensus 260 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~------------------~~~~~~~ 310 (521)
+......+..+......|+.+.+..+.+....... .++.+. ... ..++...
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98877776666655555554433222221110000 000000 000 0000111
Q ss_pred CCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhc
Q 009978 311 ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (521)
.+...+. ++++||.++...+..++..........+.|.|++..+|.++.+.++......++..++.++.+++.||+++|
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 1222233 578999999888888888888777778899999887899999999998888888888889999999999988
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhc---cchhHHHHH-HHHHHHHHHhhhhhhhHHHHH-hhhccchhhHHhHHHHH
Q 009978 391 GTSVTLTRKILQSIGFIAPGIALIGLTA---AKSPVMASA-WLTLAIGMKSFSHSGFLVNLQ-EIAPQYSGVLHGISNTA 465 (521)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~ 465 (521)
+ .+..+..+.++....+.. .+..+.... .++.+.+. +...+....... ..+++.+|.++|+.++.
T Consensus 328 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 397 (471)
T PRK10504 328 R---------VLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVN-STRFSSMNTLTLKDLPDNLASSGNSLLSMI 397 (471)
T ss_pred H---------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCHHhccchHHHHHHH
Confidence 2 222233322222222221 122222221 22222222 233333334443 44457999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 009978 466 GTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 466 ~~~g~~~~~~~~g~l~~~~g 485 (521)
..+|..+|+.+.|.+.+..|
T Consensus 398 ~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 398 MQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998776
No 36
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.2e-34 Score=284.57 Aligned_cols=372 Identities=19% Similarity=0.212 Sum_probs=276.7
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccc
Q 009978 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (521)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~ 186 (521)
.++..+.++..++...|.+.+++|.++.+.|++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-- 80 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-- 80 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh--
Confidence 456777888899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHH-HHHHHhhhccCchhHHHHHHHHH
Q 009978 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL-VLSPILMSQAGIFGPFVIFGLSG 265 (521)
Q Consensus 187 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~l~~~l~~~~gw~~~f~~~~~~~ 265 (521)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+||+.|++.+++.
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999 57777777889999999988887
Q ss_pred HHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 009978 266 FLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILS 345 (521)
Q Consensus 266 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 345 (521)
++..++.++..++++++++..+.++.+. ++.+.. ..+.+++.+......+.++++|.++...+..++.......+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPN--EEPDGD-AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILD 237 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcc--cccccc-cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 7766666666666554322111110000 000000 0001111112223456788999999998888888888888999
Q ss_pred HHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc--cchhH
Q 009978 346 WMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA--AKSPV 423 (521)
Q Consensus 346 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 423 (521)
+.|.|+++.+|+++.+.+...+...++..+++++.+++.||..+++. .................... ..+..
T Consensus 238 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (379)
T TIGR00881 238 WSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR------GPLAVFFMALIIVSLLVYWLNPAANPL 311 (379)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc------hHHHHHHHHHHHHHHHHHhcCcchhHH
Confidence 99999998889999999999999999999999999999998754421 11111111112222222211 22222
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHH
Q 009978 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGF 490 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 490 (521)
......++.................+..| ++||++.|+.+....+|..++|.+.|.+.|..| |...
T Consensus 312 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~ 378 (379)
T TIGR00881 312 MDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAGA 378 (379)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-cccc
Confidence 22222222111122222233344555555 699999999999999999999999999999887 6543
No 37
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=9.9e-33 Score=273.42 Aligned_cols=370 Identities=15% Similarity=0.109 Sum_probs=271.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHH
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~ 176 (521)
....+..+.+.++...+......+..|.+++++|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++.++.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 45556667777788888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhh---hhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh-c-
Q 009978 177 ATFLT---PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-Q- 251 (521)
Q Consensus 177 ~~~l~---~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~- 251 (521)
+.+++ .++ ++++.++++|+++|+|.+...+..+.++.|+.|+++|.+.+++.+..+.+|..+|+.+++.+.. .
T Consensus 104 ~~~l~~~~~~a--~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 104 GAALFWPAAEI--MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99875 345 8999999999999999999999999999998877777778999999999999999999876541 0
Q ss_pred ------------------------cCchhHHHHHHHHHH-HHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCC
Q 009978 252 ------------------------AGIFGPFVIFGLSGF-LWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGN 306 (521)
Q Consensus 252 ------------------------~gw~~~f~~~~~~~~-i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (521)
.+||++|+....+.. +..++.....|+.+++++ .
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~---------------------~ 240 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH---------------------S 240 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc---------------------c
Confidence 246666654443332 222222222222111100 0
Q ss_pred CCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHH
Q 009978 307 KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYF-NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (521)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (521)
+++..+..+..++++++|.++...+..++..........|.+.|+ ++.+|+++.++++......++..+++++.+++.|
T Consensus 241 ~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~ 320 (438)
T PRK10133 241 DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLIS 320 (438)
T ss_pred cccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001112234566889999988887777777778887888889885 5568999999999999999999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHH
Q 009978 386 MLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTA 465 (521)
Q Consensus 386 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 465 (521)
|+++|+ .. ..+..+....++.....+.... +..+.+.+.+.+...|..+....+..|++.+++.++.. +
T Consensus 321 r~g~~~-------~l--~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~ 389 (438)
T PRK10133 321 RFAPHK-------VL--AAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-M 389 (438)
T ss_pred HcCHHH-------HH--HHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-H
Confidence 999882 22 2222222222222222222222 22333444445556667777777777777788888886 4
Q ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 009978 466 GTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFL 500 (521)
Q Consensus 466 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 500 (521)
..+|+.++|.+.|.+.|..|+.+..|++..++.+.
T Consensus 390 ~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 390 TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 55789999999999999876456666655444433
No 38
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=5.3e-34 Score=282.93 Aligned_cols=377 Identities=16% Similarity=0.125 Sum_probs=272.5
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh---
Q 009978 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW--- 183 (521)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~--- 183 (521)
..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 34455556667788899999999999999999999999999999999999999999999998888877776654432
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
...++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 11267889999999999998888889999999999999999999999999999999999999999998899999998877
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (521)
..++..++.+. .|+.++++.+. ++..++..+.++..+++|.++...+..++... ...+
T Consensus 185 ~~~~~~~~~~~-l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 242 (417)
T PRK10489 185 GTFITLLPLLR-LPALPPPPQPR--------------------EHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAV 242 (417)
T ss_pred HHHHHHHHHHh-CCCCCCCCccc--------------------ccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhH
Confidence 76665544433 34332211100 00001112345567788887766655544333 4567
Q ss_pred HHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhH
Q 009978 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (521)
Q Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
..+.|.|+++.+|.++.+.+++.+...++.+++.++.+++.||.+++ ..+..+..+.++....+...++.+
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~ 313 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG---------LLMLLSTLGSFLAVGLFGLMPMWI 313 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc---------hHHHHHHHHHHHHHHHHHccchHH
Confidence 78899999998899999999999999999999999999999875443 122233333333344444444443
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH-HHHH
Q 009978 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL-YFLS 501 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~-~~~~ 501 (521)
...+..++.+...+...+....+..+..| +.||+++|+++...++|..+||.+.|.+.|..| +...+...+++ .+++
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~ 392 (417)
T PRK10489 314 LAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIG 392 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHH
Confidence 33333333223333334444566666666 589999999999999999999999999999988 55555555544 4445
Q ss_pred HHHHHHhccCcccc
Q 009978 502 ALFYIIFSTGERVN 515 (521)
Q Consensus 502 ~~~~~~~~~~~~~~ 515 (521)
++.....++.++++
T Consensus 393 ~~~~~~~~~~~~~~ 406 (417)
T PRK10489 393 VLLLLVLGELRRFR 406 (417)
T ss_pred HHHHHhcccccccc
Confidence 55555544444433
No 39
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=5.2e-33 Score=271.41 Aligned_cols=353 Identities=14% Similarity=0.098 Sum_probs=272.7
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhc
Q 009978 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~ 184 (521)
....++..+......+.+|.+..+++.++.++|++.+++.++..++++++|+++||+|||+++..+.++..++.++..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 45566667777788888999999999999999999999999999999999999999999999999999988888877776
Q ss_pred ccc-----chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHH
Q 009978 185 ADT-----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (521)
Q Consensus 185 ~~~-----~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~ 259 (521)
+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|.++||.+++.+.+..|||+.|+
T Consensus 85 --~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~ 162 (365)
T TIGR00900 85 --ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIW 162 (365)
T ss_pred --HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 5 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHH
Q 009978 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (521)
Q Consensus 260 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 339 (521)
+.++..++..+..+...++++++++..+.++ + ..++..+.++.++++|.++...+..++....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (365)
T TIGR00900 163 VDAVGFAISALLIVSVRIPELAASEIQALSN-A----------------VLRDTREGIKFVLKNPLLRTLLLLALLFNLV 225 (365)
T ss_pred HHHHHHHHHHHHHHhcccccCCCccccccch-h----------------HHHHHHhHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9887766655444433222221111100000 0 0001123456788899998888887777777
Q ss_pred HHHHH-HHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc
Q 009978 340 FFVIL-SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (521)
Q Consensus 340 ~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
..... .+.|.|.++.+|.+..+.+.......++..++.++.+++.||.+++ .....+....++....+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 296 (365)
T TIGR00900 226 FAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVGL 296 (365)
T ss_pred HHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHHh
Confidence 76666 8889999887899999999999999999999999999999999877 2333333333333333333
Q ss_pred cch-hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 419 AKS-PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 419 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
.+. .+...+..++.....+...+....+..+..| ++|+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 297 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 297 TPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 332 3333333333333334444555555666555 699999999999999999999999999998754
No 40
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.4e-32 Score=273.73 Aligned_cols=356 Identities=15% Similarity=0.114 Sum_probs=246.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHH-HHH-----HHHHHHhhhhhHHHHhHhcchHHHHHH
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQ-SSF-----LWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~-s~~-----~~~~~i~~~~~G~l~dr~Grr~~~~~~ 170 (521)
|++....++++.+++++++..+++..|.+.++++.++.+.+.+. +.. .++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 45567788889999999999999999999999999888765443 322 222346889999999999999999999
Q ss_pred HHHHHHHHhhhhhccccchH--------HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHH
Q 009978 171 VALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (521)
Q Consensus 171 ~~~~~~~~~l~~~~~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 242 (521)
.+++.++.++++++ ++++ .++++|+++|++.+...+....++.|++|+++|++++++...+.++|..+++
T Consensus 93 ~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 93 LSIMASGTLLIAFV--PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 7876 4688999999999999999999999999999999999999999888888888
Q ss_pred HHHHHhh--------hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCC
Q 009978 243 VLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI 314 (521)
Q Consensus 243 ~l~~~l~--------~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (521)
.+++.+. +.+|||+.|++..+...+. +......|+. + +... + ++ +.+..
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~----~~~~~~~~e~-~---~~~~----~--------~~---~~~~~ 227 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI----FLIRRSLEET-E---EFLA----R--------KH---RPSMR 227 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH----HHHHHhcCCC-H---HHHH----h--------hh---ccccc
Confidence 8877763 4679999998754432211 1111111111 0 0000 0 00 00112
Q ss_pred chHHHHHhcchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 315 PPFRRLLSKMPTWSI-IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (521)
Q Consensus 315 ~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (521)
+.++...+++..+.. .+..++.....+.+..|.|.|+++.+|++..+.++...+..++..++.++.|++.||+++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~-- 305 (434)
T PRK15075 228 EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRP-- 305 (434)
T ss_pred cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--
Confidence 234445555555443 33334445567778899999999888999988888888888999999999999999999882
Q ss_pred cchhHHHHHHHHHHHHHHHH--H-HHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHH-H
Q 009978 394 VTLTRKILQSIGFIAPGIAL--I-GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGT-F 468 (521)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~-~ 468 (521)
.... .......... . .....+..........+.....+...+....+..|..| +.|+++.|+.+.+.. +
T Consensus 306 -----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~ 379 (434)
T PRK15075 306 -----VLIA-FTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAI 379 (434)
T ss_pred -----HHHH-HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHH
Confidence 1221 1111111111 1 11122222222221222222223333444455566666 689999999766555 4
Q ss_pred HHHHHHHHHHHHhhccc
Q 009978 469 AAILGTVGAGFFVELVG 485 (521)
Q Consensus 469 g~~~~~~~~g~l~~~~g 485 (521)
++.++|.+.|.+.|..|
T Consensus 380 ~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 380 FGGFTPAISTWLIHVTG 396 (434)
T ss_pred HhhhHHHHHHHHHHhcC
Confidence 58889999999999887
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=268.44 Aligned_cols=361 Identities=14% Similarity=0.098 Sum_probs=265.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l 180 (521)
+..+.+..++.........+.+|.+.+++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556777778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHH
Q 009978 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (521)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~ 260 (521)
++++ ++++.+++.|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+|+.+++.+.+...|...+.
T Consensus 88 ~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~- 164 (381)
T PRK03633 88 LGLM--VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV- 164 (381)
T ss_pred HHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-
Confidence 8888 8999999999999999998888888888899999999999999999999999999999999877544433332
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHH
Q 009978 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (521)
Q Consensus 261 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 340 (521)
.+....... ..++. +.+++..+ + + ...+.++.+++|.++......+......
T Consensus 165 ~~~~~~~~~-~~~~~-~~~~~~~~--------------------~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (381)
T PRK03633 165 TGLVLAAIL-PLLFT-RILNQQAE--------------------N---H---DSTSIWPMLKLRQARLGVNGCIISGIVL 216 (381)
T ss_pred HHHHHHHHH-HHHHh-cccCCCCC--------------------C---C---CCCCHHHHHHhcchHHHHHHHHHHHHHH
Confidence 222222111 11121 11111100 0 0 1123456788888776655455555556
Q ss_pred HHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccc
Q 009978 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (521)
Q Consensus 341 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (521)
.....++|.|+++ .|.++.+.+...+...++.+++++..+++.||+++|+ ....+.....+....+. .
T Consensus 217 ~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~---------~l~~~~~~~~~~~~~~~--~ 284 (381)
T PRK03633 217 GSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL---------VLRVQVFVVILGSIAML--S 284 (381)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH---------HHHHHHHHHHHHHHHHh--h
Confidence 6677889999987 6999999999888989999999999999999999882 22222222222222222 1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 009978 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYF 499 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 499 (521)
.........+++.+.. ...+.......+..| ++++...+..+...++|..+||.+.|++.|+.| +...|.+.+.+.+
T Consensus 285 ~~~~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l 362 (381)
T PRK03633 285 QAAMAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSF 362 (381)
T ss_pred hHHHHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHH
Confidence 1111222222232222 333445454455444 577778888888889999999999999999987 8888888777776
Q ss_pred HHHHHHH
Q 009978 500 LSALFYI 506 (521)
Q Consensus 500 ~~~~~~~ 506 (521)
+..+..+
T Consensus 363 ~~~~~~~ 369 (381)
T PRK03633 363 IYLLMLL 369 (381)
T ss_pred HHHHHHH
Confidence 5544443
No 42
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=7.5e-34 Score=288.03 Aligned_cols=401 Identities=19% Similarity=0.142 Sum_probs=272.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCC--------cchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHH
Q 009978 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWS--------RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW 169 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~ 169 (521)
+....++.+..+...++...+....+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 27 ALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 33444455566667778888888999998888777 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcc-ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHH---
Q 009978 170 GVALWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS--- 245 (521)
Q Consensus 170 ~~~~~~~~~~l~~~~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~--- 245 (521)
+.++..++.+++.+.. ..+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988875541 145668999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCchhHHHHHHHhhccccccC-------------CCCCCC
Q 009978 246 PILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELEYILREKQKPLLMG-------------NKHKPA 311 (521)
Q Consensus 246 ~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 311 (521)
....+..+||+.|++.++..++..+ ..++.+|+|.... ..+.++.+...++........ ...+.+
T Consensus 187 ~~~~~~~~w~~~f~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (481)
T TIGR00879 187 VSLNNTLGWRIPLGLQLIPAGLLFL-GLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKR 265 (481)
T ss_pred hcCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 6666778999999996665555443 3344566543110 001111111100000000000 000000
Q ss_pred CCCchHHHHHh------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHH
Q 009978 312 TVIPPFRRLLS------KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (521)
Q Consensus 312 ~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (521)
.....++..++ .+.++...+..+...........+.|.+.++ .|++..+.+.......++.+++.++.+++.|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 344 (481)
T TIGR00879 266 SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVD 344 (481)
T ss_pred hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011223332 2223333333333333344456677777766 7999888888888889999999999999999
Q ss_pred HHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh-----ccc------hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-c
Q 009978 386 MLIQRGTSVTLTRKILQSIGFIAPGIALIGLT-----AAK------SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-Q 453 (521)
Q Consensus 386 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 453 (521)
|+++|+ ....+..+.++..+.+. ... .........++..+......+....+..+..| +
T Consensus 345 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 415 (481)
T TIGR00879 345 RFGRRP---------LLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLS 415 (481)
T ss_pred HhcchH---------HHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChH
Confidence 999882 22222222222222221 111 12222222223333333333455566677776 5
Q ss_pred chhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 454 YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 454 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
.|+++.|+.+...++|.+++|.+.+.+.+..| +...|++.+++.+++.++.+.+.+
T Consensus 416 ~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 416 LRPKGISIAVAANWLANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHheecc
Confidence 89999999999999999999999999999887 888888888777777666554433
No 43
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=4.3e-33 Score=282.70 Aligned_cols=372 Identities=18% Similarity=0.160 Sum_probs=285.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh
Q 009978 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (521)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 179 (521)
.+..+.+..++..++.....+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++.++.++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45566778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHH
Q 009978 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (521)
Q Consensus 180 l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~ 259 (521)
+++++ ++++.+++.|+++|++.+...+...+++.|++|+++|+++++++.....+|..+||.+++++.++++||+.|+
T Consensus 83 ~~~~~--~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVA--PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCc--CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 99998 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCC-CchhHHH----------HHHHhhcc-ccccC-------------------CCC
Q 009978 260 IFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELE----------YILREKQK-PLLMG-------------------NKH 308 (521)
Q Consensus 260 ~~~~~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~-~~~~~-------------------~~~ 308 (521)
+.+.+.++..++..+..|++++...+ .+..... ....+..+ ..... .+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 98888777666665555554332211 1111000 00000000 00000 000
Q ss_pred CCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHH
Q 009978 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (521)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (521)
+++++..+ .+++++|.++...+..++.....+....++|.|+++.+|+++.++++......++..++.++.|++.||++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~ 319 (485)
T TIGR00711 241 TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKID 319 (485)
T ss_pred cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 01111122 36788999998888888888888888899999999989999999999999999999999999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHHHHHHHHh--c--cchhHHHHH-HHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHH
Q 009978 389 QRGTSVTLTRKILQSIGFIAPGIALIGLT--A--AKSPVMASA-WLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISN 463 (521)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 463 (521)
+| .....+....++....+. . ..+.+.... .++.+.+......+.........+++++|++.|+.+
T Consensus 320 ~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 390 (485)
T TIGR00711 320 PR---------KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSN 390 (485)
T ss_pred cH---------HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHH
Confidence 88 233334444443333332 1 122222222 233333333333344444455566689999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 009978 464 TAGTFAAILGTVGAGFFVEL 483 (521)
Q Consensus 464 ~~~~~g~~~~~~~~g~l~~~ 483 (521)
....+|+.+|+.+.|.+.++
T Consensus 391 ~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 391 FTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999875
No 44
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=2e-32 Score=269.95 Aligned_cols=369 Identities=13% Similarity=0.031 Sum_probs=266.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l 180 (521)
...+.+..+...+....+.+.+|.+.++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++.+++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 33345555667778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHH
Q 009978 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (521)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~ 260 (521)
+.++ ++++.++++|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+.+..|||+.|++
T Consensus 98 ~~~a--~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 98 TLFT--TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred HHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9998 99999999999999998876777788999999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHH
Q 009978 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (521)
Q Consensus 261 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 340 (521)
.++..++..+..++..||+++++++. .+.....++++++++||.+|...+..++.....
T Consensus 176 ~~~~~~i~~~~~~~~lp~~~~~~~~~---------------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~ 234 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPETVKRGAVP---------------------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPM 234 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCccccCCC---------------------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 99887776665555556543221100 000112345678899999999888888888888
Q ss_pred HHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccc
Q 009978 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (521)
Q Consensus 341 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (521)
..+..+.|.++++.+|+++.+.++.......+..++..+.+++.++..+++... ....+..++......... ...+
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~--~~~~~~~ig~~l~~~~~~--~~~~ 310 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIW--RAVPIQLVGLALLIVGNL--LWPH 310 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHH--HHHHHHHHHHHHHHHHHH--Hccc
Confidence 888888999999988999999999887777777777777766654433221100 000011111111111111 1122
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 009978 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (521)
..+......++.....+...+........-.+..+|++.++.+.....+..+++...|++.+.. -...|...+++.
T Consensus 311 ~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~ 386 (413)
T PRK15403 311 VWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG--GRLPFHLLAVVA 386 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHH
Confidence 2221222222222222223333332221222235899999999999999999999999998873 344444444333
No 45
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.4e-32 Score=278.60 Aligned_cols=412 Identities=15% Similarity=0.125 Sum_probs=275.7
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-----cCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHH
Q 009978 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAH-----GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA 168 (521)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~ 168 (521)
.++++..+.++.++.+.++++....+...|.+.+++ +.+..+.+++.+.+.++..++++++|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 456777888888999999999999999998887643 345667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccccc------hHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHH
Q 009978 169 WGVALWSLATFLTPWAADTS------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (521)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~~~------~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 242 (521)
++.++..++.++++++ ++ ++.++++|+++|++.|...+....++.|++|+++|+++.++.+....+|.++++
T Consensus 91 ~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 91 MELIIMIIATVASGLS--PGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHc--cCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888877 44 788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-----------------------ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCC---CCCchhHHHHHHH
Q 009978 243 VLSPILMS-----------------------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRH---PQISKYELEYILR 296 (521)
Q Consensus 243 ~l~~~l~~-----------------------~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~ 296 (521)
.++..+.. ..+||+.|.+.++.+++..+ ..+..||+|+.. .+.+++..+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 88876542 23799999887777665444 345668888742 1111111211111
Q ss_pred hhccccc--cCC----CCCCCCCCchHHHHHhc---chHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch
Q 009978 297 EKQKPLL--MGN----KHKPATVIPPFRRLLSK---MPTWS----IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQAS 363 (521)
Q Consensus 297 ~~~~~~~--~~~----~~~~~~~~~~~~~~~~~---~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 363 (521)
....+.. .++ +++++....++++++++ ++.+. .....+.....+++...+.|.++++ .|++....+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~ 326 (502)
T TIGR00887 248 VLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAAT 326 (502)
T ss_pred HhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccc
Confidence 1110000 000 00011112356666653 22211 1222333344555667778888876 688765332
Q ss_pred h------------HhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh--ccc-hhHHHHHH
Q 009978 364 W------------FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT--AAK-SPVMASAW 428 (521)
Q Consensus 364 ~------------~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~ 428 (521)
. ...+..++.+++.++.+++.||+|||+ +...+..+.++....+. ... ........
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~---------~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 397 (502)
T TIGR00887 327 NNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKP---------IQLMGFFILTVLFFVLGFAYNHLSTHGFLAI 397 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh---------HHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 1 123334456668889999999999983 22222222222222221 110 11111111
Q ss_pred HHHHHHH-HhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc---------chHHHHHHHHHH
Q 009978 429 LTLAIGM-KSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG---------SFQGFLLLTSLL 497 (521)
Q Consensus 429 ~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g---------~~~~~~~~~~~~ 497 (521)
..+...+ .....+..+.+..|..| +.|+++.|+.+.+.+++++++|.+.+++.+..+ ++...|.+.+++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~ 477 (502)
T TIGR00887 398 YVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALF 477 (502)
T ss_pred HHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHH
Confidence 1122222 22233445666788888 589999999999999999999999999988431 145567777777
Q ss_pred HHHHHHHHHHhccCccccccc
Q 009978 498 YFLSALFYIIFSTGERVNFDE 518 (521)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~ 518 (521)
.+++.+..+++++.++++.+|
T Consensus 478 ~~~~~i~~~~lpEt~~~~lee 498 (502)
T TIGR00887 478 MFLGILFTLLIPETKGKSLEE 498 (502)
T ss_pred HHHHHHHheEeccCCCCCHHh
Confidence 766666555556555554443
No 46
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.7e-32 Score=277.38 Aligned_cols=385 Identities=14% Similarity=0.133 Sum_probs=265.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+++|+.+..+++..+++.++.....+..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
+++.+++.+. ++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.++|
T Consensus 96 ~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 96 SVGTLACGFA--PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9999999988 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-chhHHHHHHHhhccccccCCCCCCCCCCch---------HHHHHh--
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQKPLLMGNKHKPATVIPP---------FRRLLS-- 322 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-- 322 (521)
|+.|++.++..++. +......|+.++...+. ++.+.+...+... . .++..... ....+.
T Consensus 174 ~~~f~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (496)
T PRK03893 174 RALFFIGILPIIFA-LWLRKNLPEAEDWKEKHAGKAPVRTMVDILY-------R-GEHRIINILLTLAAAAALWFCFAGN 244 (496)
T ss_pred HHHHHHHHHHHHHH-HHHHHhCCCchhhhhhccccccchhHHHHHh-------c-chhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99998754433332 22222233332111000 0000000000000 0 00000000 000000
Q ss_pred ----------------------------c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHH
Q 009978 323 ----------------------------K-MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (521)
Q Consensus 323 ----------------------------~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 373 (521)
+ +......+..+...........++|.|+++.+|++..+++.+.+...++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~ 324 (496)
T PRK03893 245 LQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGA 324 (496)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 0 00000011111111111234578899998778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh-c-cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhh
Q 009978 374 AFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT-A-AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA 451 (521)
Q Consensus 374 ~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (521)
+++.++.|++.||+++|+ ....+..+..+..+.+. . ....+......++..+......+....+..+..
T Consensus 325 ~~g~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (496)
T PRK03893 325 AVGCCVGGFLGDWLGTRK---------AYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYF 395 (496)
T ss_pred HHHHHHHHHHHHHhcchH---------HHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhC
Confidence 999999999999999882 22222222222222111 1 122222222222211222222334445555665
Q ss_pred c-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 009978 452 P-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFL 500 (521)
Q Consensus 452 ~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 500 (521)
| +++|+++|+.+....+|..+||.+.|.+.|..| +...+...++...+
T Consensus 396 ~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~~~ 444 (496)
T PRK03893 396 DTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSFSLTF 444 (496)
T ss_pred CHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHHHHH
Confidence 5 689999999999999999999999999999988 77666555444333
No 47
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=9.5e-32 Score=264.95 Aligned_cols=353 Identities=16% Similarity=0.140 Sum_probs=270.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHH
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~ 176 (521)
.++.+.+..+...+..+....+.+.+|.+.+++|.|+.+.+++.+++.++..++++++|+++||+|||+++.++.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 45555556666666677777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchh
Q 009978 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (521)
Q Consensus 177 ~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~ 256 (521)
+.+++.+. ++++.+++.|++.|++.+...+....+..|.++++++++++++...+..+|..++|.+++.+.+..|||+
T Consensus 86 ~~~~~~~~--~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFA--HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHH--ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 99988888 8999999999999999988888888999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHH
Q 009978 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (521)
Q Consensus 257 ~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 336 (521)
.|++.++..++..+...+..||+++.+++ +.+..+++++.+++|.++...+..+..
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADAR------------------------RTRVLASYRTLLSNRRFNCYLLMLIGT 219 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccc------------------------hhHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 99998887766555555555554322110 001224566788888888777666666
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHH
Q 009978 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
......+..+.+.++++.+|+++.+.++......++..++.++.+++.||.+++ ............+.....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~ 291 (394)
T PRK11652 220 LAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL--------MWQSVICCLLAGLLMWIP 291 (394)
T ss_pred HHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH
Confidence 666666677788899888899999999888888888888888889998888743 111111211121221111
Q ss_pred h--ccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhc
Q 009978 417 T--AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (521)
Q Consensus 417 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 483 (521)
. ...+.+......++.....+...+.......+..|+++|++.++.+....+|..+++.+.|.+.+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 292 GWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 1 112233333333333333344556666666677788999999999999999999999999988765
No 48
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=7e-32 Score=267.55 Aligned_cols=372 Identities=17% Similarity=0.134 Sum_probs=268.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcch-----hhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHH
Q 009978 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSF-----SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (521)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 177 (521)
.+.+..++.........+.+|.+.+++|.+..+ .|++.+++.++..++++++|+++||+|||+++..+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 344556666777778888999999999998665 488999999999999999999999999999999999999999
Q ss_pred HhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhH
Q 009978 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (521)
Q Consensus 178 ~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~ 257 (521)
.+++.+. ++++.+++.|++.|++.+ ..+....++.+++|+++|++++++......+|..++|.+++.+.+..+||+.
T Consensus 98 ~~~~~~~--~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 174 (408)
T PRK09874 98 MVLMGLA--QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPV 174 (408)
T ss_pred HHHHHHH--hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 8888887 899999999999999865 4677888999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHH-HHHHHH
Q 009978 258 FVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII-VANAMH 336 (521)
Q Consensus 258 f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~ 336 (521)
|++.+++.++..+..++..++++++.++.++. ..++..+.+++|+++... ...+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (408)
T PRK09874 175 FFITASVLFLCFLVTLFCIRENFQPVSKKEML-----------------------HMREVVTSLKNPKLVLSLFVTTLII 231 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccccchhhh-----------------------HHHHHHHhCcCCchHHHHHHHHHHH
Confidence 99998887776666655555543221100000 001223445666655433 333334
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcc---cchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHH
Q 009978 337 SWGFFVILSWMPIYFNFVYHIDLR---QASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
......+..+.+.|..+..+.... ..+.+..+.+++..++.+..|++.||+++|+ ....+.....+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~ 302 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK---------ILITALIFSVLLL 302 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch---------hHHHHHHHHHHHH
Confidence 444555667788888874332221 2345556667778888899999999999883 2222333333333
Q ss_pred HHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhh-ccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 009978 414 IGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLL 492 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 492 (521)
+.+...++.+...+..++.+...+...+.......+.. ++++|+.+++.+....+|..+||.+.|.+.+..| +...|+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~ 381 (408)
T PRK09874 303 IPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFL 381 (408)
T ss_pred HHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHH
Confidence 33333334443333333323333333444444444444 4689999999999999999999999999999887 999999
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 009978 493 LTSLLYFLSALFYIIFST 510 (521)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~ 510 (521)
+.+++.+++.++.+...+
T Consensus 382 ~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 382 VTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 998888887776655433
No 49
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=7.2e-32 Score=265.63 Aligned_cols=365 Identities=17% Similarity=0.150 Sum_probs=252.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhh-hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh
Q 009978 101 VSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 179 (521)
+..+.+..++......+..+.+|. +.+++|.|..++|++.+++.++..++++++|+++||+||||+++.+.+...++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333444556666666777788886 5688999999999999999999999999999999999999999998887766544
Q ss_pred hh---hhc---cccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 180 LT---PWA---ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 180 l~---~~~---~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
.+ ... ..++++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..+||++++++.+.+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 32 211 115788999999999999998889999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHH
Q 009978 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (521)
Q Consensus 254 w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 333 (521)
|++.+.+..+..++.... ....|+.+++++ ++ .+.++.++ .++...+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------------------~~----~~~~~~~~--~~~~~~~~~ 225 (392)
T PRK12382 177 FAALALTTMVLPLLAWAF-NGTVRKVPAHAG------------------------ER----PSLWSVVG--LIWKPGLGL 225 (392)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhccCCCCCcc------------------------cC----chHHHHHH--HHHHhHHHH
Confidence 998777655443332221 111121111000 00 01112221 122222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHH
Q 009978 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (521)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
++..........+.+.|+++ .|++. .+.......++.++++++.|++.||+++|+. .. .+....++..
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-------~~--~~~~~~~~~~ 293 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV-------AI--VSLLVETVGL 293 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-------hH--HHHHHHHHHH
Confidence 33344555667788888877 56653 4556666777788899999999999998732 22 2222222333
Q ss_pred HHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHH-HhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 009978 414 IGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNL-QEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLL 492 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 492 (521)
..+...++.+......++.....+...+...... ...++++||++.|+.+....+|..++|.+.|.+.|+.| |...|.
T Consensus 294 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~ 372 (392)
T PRK12382 294 LLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFL 372 (392)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHH
Confidence 3333334443333333332222233334444443 44455799999999999999999999999999999988 999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 009978 493 LTSLLYFLSALFYIIFS 509 (521)
Q Consensus 493 ~~~~~~~~~~~~~~~~~ 509 (521)
+.+++.+++.++.+...
T Consensus 373 ~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 373 AGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99888887777666543
No 50
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3.4e-32 Score=275.46 Aligned_cols=396 Identities=17% Similarity=0.155 Sum_probs=264.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh--------cCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAH--------GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII 166 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~ 166 (521)
+..++...+..++.+..+++...+++..|.+.+++ +.++.+.+++.+++.++..++++++|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 44566677777888899999999999999888877 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcc----------ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhh
Q 009978 167 MAWGVALWSLATFLTPWAA----------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS 236 (521)
Q Consensus 167 ~~~~~~~~~~~~~l~~~~~----------~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 236 (521)
++++.+++.++.+++++.. .+.++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 9999999988887766520 123567889999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhh--------hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CchhHHHHHHHhhccccccCCC
Q 009978 237 GNAIGLVLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEYILREKQKPLLMGNK 307 (521)
Q Consensus 237 g~~~g~~l~~~l~--------~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (521)
|.++++.++..+. +.+|||+.|++.+++.++..+. .+..||+|+.... .+.++.+...++.....
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~----- 241 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNT----- 241 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCCh-----
Confidence 9999988776553 3568999999988877766544 4456776643111 11111111111111000
Q ss_pred CCCCCCCchHHHHHh-----cchHH-----HHH----HHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHH
Q 009978 308 HKPATVIPPFRRLLS-----KMPTW-----SII----VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (521)
Q Consensus 308 ~~~~~~~~~~~~~~~-----~~~~~-----~~~----l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 373 (521)
+.+....+.++.++ .+..+ ... ...+......+....+.|.+.++ .|.+.....+.....++..
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~ 319 (479)
T PRK10077 242 -LATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVIN 319 (479)
T ss_pred -hHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHH
Confidence 00000001111111 01110 001 11111112233445566777766 7888777777777788889
Q ss_pred HHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh---ccchhH-HHH-HHHHHHHHHHhhhhhhhHHHHH
Q 009978 374 AFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT---AAKSPV-MAS-AWLTLAIGMKSFSHSGFLVNLQ 448 (521)
Q Consensus 374 ~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 448 (521)
+++.++.+++.||+++| .+...+..+.++..+.+. ..+... ... ...+.+.+......+....+..
T Consensus 320 ~i~~~~~g~l~dr~g~r---------~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (479)
T PRK10077 320 LTFTVLAIMTVDKFGRK---------PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLS 390 (479)
T ss_pred HHHHHHHHHHHHHhcCh---------HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhH
Confidence 99999999999999988 233333333333332221 111111 111 1222222222223355667777
Q ss_pred hhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHh------hcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 449 EIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV------ELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 449 ~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
|..| ++|+++.|+.+...+++.++++.+.+.+. |..| +...|++.+++.+++.++.+.+
T Consensus 391 e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 391 EIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHHHHHHHHHhc
Confidence 7777 68999999999999999999977776544 4555 5667777676666665554443
No 51
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=2e-31 Score=263.29 Aligned_cols=350 Identities=18% Similarity=0.117 Sum_probs=263.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l 180 (521)
+....+...+..+....+.+..|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++..++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 87 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLG 87 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHH
Confidence 33444445556667778888899999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHH
Q 009978 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (521)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~ 260 (521)
+.+. ++++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++++.+.+|||+.|++
T Consensus 88 ~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~ 165 (401)
T PRK11043 88 MLWV--ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFAT 165 (401)
T ss_pred HHHh--cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Confidence 8888 89999999999999998888888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHH
Q 009978 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (521)
Q Consensus 261 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 340 (521)
.+++.++..+..+...++.+++++ ++...++++++++|.++...+...+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (401)
T PRK11043 166 LFAITLLLILPTLRLKPSKKARKQ--------------------------SQDALTFKQLLKSKTYLGNVLIFAACSAAF 219 (401)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccc--------------------------chHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 888877766555444332221100 011235678888888877666666666666
Q ss_pred HHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHH--Hhc
Q 009978 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG--LTA 418 (521)
Q Consensus 341 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 418 (521)
..+..+.|.++++ +|+++.+.++......++..++.++.+++.||+++++.. ........+....+.. ...
T Consensus 220 ~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 292 (401)
T PRK11043 220 FAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL------PWLLVLFAVSVIAIWLASLLS 292 (401)
T ss_pred HHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH------HHHHHHHHHHHHHHHHHHHhc
Confidence 6777888988877 799999999888777888889999999999999877210 1111111111111111 111
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 419 AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
.+..+..+....+.....+...+.......+..|+++|++.|+.++....++..++.+.|.+.+...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 359 (401)
T PRK11043 293 HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPL 359 (401)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCCh
Confidence 2233322222222233333444444444455567899999999999999999999999999988543
No 52
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=7.4e-32 Score=264.38 Aligned_cols=365 Identities=16% Similarity=0.183 Sum_probs=265.6
Q ss_pred hhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHH
Q 009978 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (521)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 192 (521)
+...++.+.+|.+.+++|+++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.+. ++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~--~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--QTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHH
Confidence 344567789999999999999999999999999999999999999999999999999999999999999888 899999
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHH
Q 009978 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVW 272 (521)
Q Consensus 193 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~ 272 (521)
++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+..
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998999999999888877766665
Q ss_pred HHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 273 LSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFN 352 (521)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 352 (521)
.+..||+++++++. +.+.++..+++++.+++|.++...+..++.......+..+.|.++.
T Consensus 163 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (377)
T PRK11102 163 FFFIPETLPKERRQ--------------------PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYI 222 (377)
T ss_pred HHhCCccCcccccC--------------------CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 55555543221100 0000111235567888998888777777776677777778888888
Q ss_pred HHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHH-HHHHHHHHHHhccc-hhHHHHHHHH
Q 009978 353 FVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF-IAPGIALIGLTAAK-SPVMASAWLT 430 (521)
Q Consensus 353 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~ 430 (521)
+.+|+++.+.+.......++..++.++.+++.||+++|+ ........ ...++........+ ..+.......
T Consensus 223 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (377)
T PRK11102 223 ELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALN-------MLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVA 295 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 878999999999999999999999999999999999882 12211111 11222222221111 2222222222
Q ss_pred HHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHH-HHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 431 LAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGT-FAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
+..+..............+..|+.+|++.++.+.... ++..+++.+.+. .+. ++...+...+++.+++.+..++..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 372 (377)
T PRK11102 296 AFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLA-PFT--SAWPMVWSMAFCSILSILFYLYAS 372 (377)
T ss_pred HHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHhc-cCC--ChHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222222333333445566678899999999877654 566666655432 222 234444444555445544444443
No 53
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.9e-31 Score=262.58 Aligned_cols=354 Identities=16% Similarity=0.134 Sum_probs=255.6
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~ 183 (521)
.....+........+.+.+|.+.+++|.++.+.++..+.+.++..+++++.|+++||+|||+.+..+.++..++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 34444555555566778899999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
. ++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.++
T Consensus 88 ~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~ 165 (392)
T PRK10473 88 A--ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAA 165 (392)
T ss_pred h--CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHH
Confidence 8 89999999999999999988999999999999999999999999999999999999999998888899999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (521)
+.++..++.....+|+++++++ ++....+..++.+++|.++...+...+.......+
T Consensus 166 ~~~i~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (392)
T PRK10473 166 MGILVLLLSLFILKETRPARAP-----------------------AASSKPRENSESLLNRFFLSRLVITTLSVTVILTF 222 (392)
T ss_pred HHHHHHHHHHHHcCCCCCcccC-----------------------CccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 8777666655555554322110 00011223456778888776666555555555566
Q ss_pred HHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhH
Q 009978 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (521)
Q Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
..+.|.++++.+|+++.+.+.......++.+++.++.+++.||+++|+ ....+.....+....+.......
T Consensus 223 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 293 (392)
T PRK10473 223 VNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT---------LMLTSQVLFLAAGITLALSPSHA 293 (392)
T ss_pred HHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788888878999999999989999999999999999999999882 22233333333232222222222
Q ss_pred HHHHH-HHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 009978 424 MASAW-LTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (521)
Q Consensus 424 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (521)
..... .++..+.. ...+ .....+..| ++++ |.......++..+++.+.+++.+..| +.......+.+.
T Consensus 294 ~~~~~~~l~~~g~~-~~~~--~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g-~~~~~~~~~~~~ 363 (392)
T PRK10473 294 VSLFGITLICAGFS-VGFG--VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG-ISAWNMLIGILI 363 (392)
T ss_pred HHHHHHHHHHHHHH-HHhH--HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHH
Confidence 21111 12222221 1111 122333444 2332 44445556777788888888888777 544444444433
No 54
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=4.1e-32 Score=268.40 Aligned_cols=374 Identities=21% Similarity=0.245 Sum_probs=270.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+++++.+....+..+...++.....+..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 44566666677777778888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
+++.+++.+. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..||
T Consensus 93 ~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALA--TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHc--cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 9999888888 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhh----cccccc--CCCCCCCCCCch-HHHHHhc---c
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREK----QKPLLM--GNKHKPATVIPP-FRRLLSK---M 324 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~-~~~~~~~---~ 324 (521)
++.|++.+++.++..++.+...|++++.....++++.....++. ..+... .+++.+.+..+. .+.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 99999987666666555555666654322111111111111110 000000 000011111112 2223332 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (521)
..+.+.+..++..........+.|.+.++ +|.++.+.+.......++..++.++.+++.||+++| .....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~ 320 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR---------VTALL 320 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH---------HHHHH
Confidence 34444455555566667777888855554 899999999999999999999999999999999877 11111
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 009978 405 GFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFF 480 (521)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l 480 (521)
................+........++.....+...+....+..+..| ++|+++.|+.+....+|..++|.+.|++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 321 LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 111111122222212333333333333333344445556666667666 6999999999999999999999999876
No 55
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=1.4e-31 Score=262.41 Aligned_cols=374 Identities=15% Similarity=0.110 Sum_probs=266.6
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~ 183 (521)
+.++.++..+.........+.+.++++.++.+.+++.+.+.+++.++++++|+++||+|||++++++.++.+++.+++.+
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH
Confidence 45556666665555666667778999999999999999999999999999999999999999999999999988887777
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
. .+. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+.+.+.
T Consensus 88 ~--~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 88 G--IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred H--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 6 553 77899999999999999999999999999999999999999999999999999999885 47777776665
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (521)
..++..+ ..+..||.+++++..+.++... .+ +..+.++.++++|.+.......++.+......
T Consensus 162 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 224 (393)
T PRK11195 162 IYLLAAL-FNLFIPRLGARRPGQSWNPIAL-LR---------------DFFHACRVLWRDKLGRFSLAGTTLFWGAGATL 224 (393)
T ss_pred HHHHHHH-HHhcCCCCcccccccCCCHHHH-HH---------------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHHH
Confidence 5444333 3344555443221111100000 00 00123456788888776655555555555666
Q ss_pred HHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhH
Q 009978 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (521)
Q Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
....|.|+++.+|.++.+.|+..+...++.++++++.+++.||.++++ ....+. ..+...+.+...++.+
T Consensus 225 ~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~---------~~~~g~-~~~~~~~~~~~~~~~~ 294 (393)
T PRK11195 225 RFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR---------VLPAGI-LMGLVVLLMALQHSLL 294 (393)
T ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc---------hHHHHH-HHHHHHHHHHHHhHHH
Confidence 677788888889999999999999999999999999999988766552 122222 2222222233333344
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHhhhccc--hhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 009978 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAPQY--SGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (521)
......++.+...+...+......++..|++ +|++.++.+...+++..++..+.+.+ +..| ....+++.++..+.+
T Consensus 295 ~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 295 PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVA 372 (393)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHH
Confidence 3333332222233333344455556666653 69999999999999999999999865 5566 677777766666666
Q ss_pred HHHHHHhccCc
Q 009978 502 ALFYIIFSTGE 512 (521)
Q Consensus 502 ~~~~~~~~~~~ 512 (521)
..+.+.++.++
T Consensus 373 ~~~~~~~~~~~ 383 (393)
T PRK11195 373 LAMALLWRWHR 383 (393)
T ss_pred HHHHHHHHHHH
Confidence 66665555433
No 56
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=4.9e-33 Score=270.24 Aligned_cols=346 Identities=26% Similarity=0.390 Sum_probs=262.4
Q ss_pred HHHHHHHhhhhhhhhhhhh-hhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh
Q 009978 105 ALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~ 183 (521)
++..++..+......+..| .+.+++|.++.+++++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4566777777888889999 899999999999999999999999999999999999999999999999999999666667
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
+ ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+...++|.+++|.+++.+.+.++||+.|++.++
T Consensus 82 ~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 A--SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred h--hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 6 77789999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCc-hHHHHHhcchHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIP-PFRRLLSKMPTWSIIVANAMHSWGFFV 342 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 342 (521)
+.++..++.....++++++++..++++.+ ++.+.... .++.++++|.+|...+..++.......
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE---------------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSG 224 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT-----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc---------------cccccccccccccccccchhhhhhhhhhHHHHHHHH
Confidence 98887765445544444333221111100 00111122 366788888887666666666667778
Q ss_pred HHHHHHHHHHHHhCCC-cccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH-HHHHHHHHHhccc
Q 009978 343 ILSWMPIYFNFVYHID-LRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI-APGIALIGLTAAK 420 (521)
Q Consensus 343 ~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 420 (521)
...+.|.|+.+.+|++ ..+.+....+..+...++.++.+++.||++++ +......... .....+......+
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-------RRLLIAILLLILGALGLLLLPFSS 297 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHCCSHHHC
T ss_pred hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8999999977879999 78899999999999999999999999998876 2222222222 2222222222222
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHH
Q 009978 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGT 474 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~ 474 (521)
+....+...++.....+...+.......+..| +++|++.|+.+...+++..+||
T Consensus 298 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 298 SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 23333333333333445556666666666665 7999999999999999999987
No 57
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=2.3e-31 Score=261.55 Aligned_cols=362 Identities=14% Similarity=0.095 Sum_probs=259.1
Q ss_pred HHHHhhhhhhhhhhhh-hhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccc
Q 009978 108 LALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~ 186 (521)
.++.........+.++ .+.+++|+|+.++|++.+...++..+.+++.|+++||+|||+++..+.++.+++.+++.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-- 96 (400)
T PRK11646 19 NMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA-- 96 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--
Confidence 3333333344444444 4678899999999999999999999999999999999999999999999999999999888
Q ss_pred cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 009978 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (521)
Q Consensus 187 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~ 266 (521)
++++.+++.|+++|++.+...+...+++.|++|+++|++++++.....++|..+||.+++++. .+|||+.|++.++..+
T Consensus 97 ~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~ 175 (400)
T PRK11646 97 HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFV 175 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 899999999999999998888999999999999999999999999999999999999999998 6799999999888776
Q ss_pred HHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Q 009978 267 LWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSW 346 (521)
Q Consensus 267 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 346 (521)
+..++..+..|+.++++ .+++..+++++.+++|.++...+..+...........+
T Consensus 176 ~~~i~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (400)
T PRK11646 176 LAAAFNAWLLPAYKLST-------------------------VRTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLM 230 (400)
T ss_pred HHHHHHHHhCCcccccc-------------------------cchhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHh
Confidence 66555444444321110 00012235667888998877666555544444445678
Q ss_pred HHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHH-HHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHH
Q 009978 347 MPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMA 425 (521)
Q Consensus 347 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
.|.|+++. +.++.+.++..+...+....+....+++.|| .+.+ + ....+....++..+.+...++.+..
T Consensus 231 ~p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-------~--~~~~~~~~~~~~~~~l~~~~~~~~~ 300 (400)
T PRK11646 231 LPIMVNDI-AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-------H--RLMAGLLIMSLSMFPIGMVSNLQQL 300 (400)
T ss_pred hhhhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-------H--HHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 89999885 4467778888777776666555555555554 4333 1 1223333333444444334444333
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccc---hHHHHHHHHHHHHHH
Q 009978 426 SAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGS---FQGFLLLTSLLYFLS 501 (521)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~---~~~~~~~~~~~~~~~ 501 (521)
.....+.....+...+.......+..| +++|+++|+.+....+|..+||.+.|.+.|..++ ....+...+++.+++
T Consensus 301 ~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (400)
T PRK11646 301 FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLIT 380 (400)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHH
Confidence 322222222223344455555556555 7999999999999999999999999999998642 345666656666555
Q ss_pred HHHHHH
Q 009978 502 ALFYII 507 (521)
Q Consensus 502 ~~~~~~ 507 (521)
.+....
T Consensus 381 ~~~~~~ 386 (400)
T PRK11646 381 LLALYW 386 (400)
T ss_pred HHHHHH
Confidence 554443
No 58
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=9.6e-31 Score=257.14 Aligned_cols=362 Identities=14% Similarity=0.102 Sum_probs=248.1
Q ss_pred HHHHhhhhhhhhhhhhh-hhhhhcCCcchhhHHHHHHHH-HHHHhhhhhHHHHhHhcchHHH-HHHHHHHHHHHhhhhhc
Q 009978 108 LALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIM-AWGVALWSLATFLTPWA 184 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~G~l~dr~Grr~~~-~~~~~~~~~~~~l~~~~ 184 (521)
.++.........+.+|. +.+++|.|++++|++.+...+ +..++++++|+ .||+||||.+ ..+.++.+++..+.+++
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 102 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN 102 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 45555555556666655 577899999999999876655 55555555555 9999999875 45556666777777777
Q ss_pred cccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhh--HHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHH
Q 009978 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTER--ARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (521)
Q Consensus 185 ~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~ 262 (521)
++++.+++.+.+.|...+...+...+++.++.++++| +...++.+.+.++|.++||++++++.+++|||..|++.+
T Consensus 103 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~ 180 (393)
T PRK15011 103 --RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA 180 (393)
T ss_pred --hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHH
Confidence 8888876665555544456788888888988866555 345578889999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhc-chHHHHHHHHHHHHHHHH
Q 009978 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK-MPTWSIIVANAMHSWGFF 341 (521)
Q Consensus 263 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 341 (521)
+..++..+..+...||.+++++... + +. +. ..++ +..+......+.......
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------~~----~~---~~~~~~~~~~~~~~~~~~~~~~~ 233 (393)
T PRK15011 181 VAFIVCGVMVWLFLPSMRKELPLAT-G-------------------TL----EA---PRRNRRDTLLLFVICTLMWGTNS 233 (393)
T ss_pred HHHHHHHHHHHhhcCccCCCCcccc-c-------------------cc----cc---cccccccHHHHHHHHHHHHHHHH
Confidence 8877776666666666543221100 0 00 00 0011 222333333344444555
Q ss_pred HHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccch
Q 009978 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (521)
Q Consensus 342 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
.+..+.|.|+++.+|+++.+.+.+.+...++.+++.++.|++.||+++|+ .. ..+.......+......++
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~-------~~--~~~~~~~~~~~~~~~~~~~ 304 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF-------LM--RVAAVAGVCFYAGMLMAHS 304 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-------HH--HHHHHHHHHHHHHHHHHhh
Confidence 56678999998888999999998888777788889999999999999882 12 2222222222222222333
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 009978 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (521)
.+..+...++.....+...+....+..+..|+++|++.++++...++|..++|.+.|.+.|..| +...+.+.+++.+++
T Consensus 305 ~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~ 383 (393)
T PRK15011 305 PAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIAT 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHH
Confidence 3333333333322333333344556678888889999999999999999999999999999887 888888888887777
Q ss_pred HHHHHHhc
Q 009978 502 ALFYIIFS 509 (521)
Q Consensus 502 ~~~~~~~~ 509 (521)
.+..+..+
T Consensus 384 ~~~~~~~~ 391 (393)
T PRK15011 384 LFCLLRIK 391 (393)
T ss_pred HHHHHhhc
Confidence 77666553
No 59
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=4e-31 Score=258.82 Aligned_cols=361 Identities=14% Similarity=0.053 Sum_probs=274.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHH----HHHHHHHHHHHh
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM----AWGVALWSLATF 179 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~----~~~~~~~~~~~~ 179 (521)
+.+.++..+.......+.+|.+.+++|.|..++|++.+++.+...++++++|+++||+||++.. .++..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 4455666667777888999999999999999999999999999999999999999999985433 222222222 2
Q ss_pred hhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHH
Q 009978 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (521)
Q Consensus 180 l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~ 259 (521)
.+..+ ++++.+++.|+++|.+.+...|...++..++ +++|++++|......++|.+++|++++.+.+.+|||..|+
T Consensus 87 ~~~~~--~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGA--HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILA 162 (382)
T ss_pred HHHhh--hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 33355 8899999999999999888889988887765 4788999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHH
Q 009978 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (521)
Q Consensus 260 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 339 (521)
+.++..++. +......|+.+++++. + +++....+++++++|+|++|...+..++....
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~~~~~~~-------------------~--~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~ 220 (382)
T TIGR00902 163 ILTAGLAFM-LIGFLIKPTIPPKDAI-------------------P--EDESQGDSAFIALLKNPMNLRFLAAVCLIQGA 220 (382)
T ss_pred HHHHHHHHH-HHHHHcCCCCCCCccc-------------------c--ccccccchhHHHHHcChHHHHHHHHHHHHHHH
Confidence 876553332 2223333321111110 0 00111233567899999999999988988888
Q ss_pred HHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 009978 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (521)
...+..+.|.|+++ .|.++.+.+....+..++.+++..+.+++.||++.| ..+.++.+...+....+...
T Consensus 221 ~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 221 HAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR---------DLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH---------HHHHHHHHHHHHHHHHHHhH
Confidence 88999999999988 899999999999988888899999999999999888 34456666666666666666
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHH-HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 009978 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNT-AGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (521)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (521)
++.+..+...++.....+...+....+.++.+++++++.+++++. ...+|..++|.++|++.|+.| + ..|...+++.
T Consensus 291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~ 368 (382)
T TIGR00902 291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIA 368 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHH
Confidence 666655555555555555666666666677755688999999874 567999999999999999987 5 6677777766
Q ss_pred HHHHHH
Q 009978 499 FLSALF 504 (521)
Q Consensus 499 ~~~~~~ 504 (521)
+++.++
T Consensus 369 ~~~~~~ 374 (382)
T TIGR00902 369 AAAFFL 374 (382)
T ss_pred HHHHHH
Confidence 665444
No 60
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=1.2e-30 Score=262.08 Aligned_cols=379 Identities=15% Similarity=0.145 Sum_probs=275.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-----cchHH-HHHHHHHH
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKII-MAWGVALW 174 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-----Grr~~-~~~~~~~~ 174 (521)
...+.+..+..+.........+|.+.++.|.+..++|.+ +.....+ ++++++|+++||+ ||||. +.++.+..
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 334455556666667788889999999999999999997 4444444 5899999999999 99885 66777777
Q ss_pred HHHHhhhhhcc-ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh-cc
Q 009978 175 SLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QA 252 (521)
Q Consensus 175 ~~~~~l~~~~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~ 252 (521)
+++..++++.. .++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.+ ..
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 77776666642 25788899999999999999999999999999999999999999999999999999999999988 57
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHH
Q 009978 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVA 332 (521)
Q Consensus 253 gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 332 (521)
|||..|++.+++.++..+..++ .||+++..+. ++ ..++....++++.++++..|...+.
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~-~~-------------------~~~~~~~~~l~~~~~~~~~~~~ll~ 230 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATLL-APEPTDTIPV-PK-------------------TLEQAVVAPLRDFFGRNNAWLILLL 230 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh-cCCCcccccc-cc-------------------chhhhHHHHHHHHHcCcCHHHHHHH
Confidence 9999999998877766554443 4554321110 00 0000112356778888888877766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHH-HHHH
Q 009978 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSA-VPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF-IAPG 410 (521)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~-~~~~ 410 (521)
.++..........+.+.|+.+.+|++..+.+.... ...++.+++.+++|++.||+++|+ ........ .+..
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~-------~l~i~~~l~~l~~ 303 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR-------ALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHHH
Confidence 66666666677778888887778999999999874 556788999999999999999872 12211111 1111
Q ss_pred HHHHHHhcc-chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009978 411 IALIGLTAA-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (521)
Q Consensus 411 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 488 (521)
.....+... ++.+......++.....+...+.......+..+ +..++.+|+.+....+|..+++.+.|.+.|..| |.
T Consensus 304 l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~ 382 (491)
T PRK11010 304 AGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WP 382 (491)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hH
Confidence 111112222 232222222233222233333445566666666 488999999999999999999999999999987 99
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 009978 489 GFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
..|.+.+++.+.+.++....++
T Consensus 383 ~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 383 TFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988888777766654
No 61
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=6.1e-32 Score=275.22 Aligned_cols=377 Identities=16% Similarity=0.103 Sum_probs=265.3
Q ss_pred hhhhhhhhhhcCC---cchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009978 120 VAIVPLSLAHGWS---RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (521)
Q Consensus 120 ~~~~~~~~~~~~s---~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 196 (521)
+..|.+.+|++++ +.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++.+++ ++++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS--PNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc--ccHHHHHHHH
Confidence 5678899999999 9999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~ 276 (521)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. +..
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999998877643 9999999998877766555 556
Q ss_pred CCCCCCCC-CCchhHHHHHHHhhcc----ccc-----c--CCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHH
Q 009978 277 SSTPDRHP-QISKYELEYILREKQK----PLL-----M--GNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (521)
Q Consensus 277 ~~~~~~~~-~~~~~~~~~~~~~~~~----~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 344 (521)
||+|+... +.+.++.....++..+ ... . +++..++....++++++++|.++...+...+.++......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 77664321 1111221111111000 000 0 0000011123467889999988877766655544443333
Q ss_pred HHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccch--h
Q 009978 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS--P 422 (521)
Q Consensus 345 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 422 (521)
...+.+..+ .+.+. .......++..+++.++.+++.||+||| .....+.++.++..+.+...+. .
T Consensus 344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~~~~~ 410 (505)
T TIGR00898 344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVPVDLY 410 (505)
T ss_pred HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcCCCch
Confidence 333333333 44442 2333455677788899999999999988 2333333333333333332222 2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 009978 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (521)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (521)
+......+++.+......+....+..|..| +.|+++.|+.++...+|++++|.+.+ +.+ .+ ....+.+.+++.+++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 411 FLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KW-LFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHH
Confidence 333333334444444455566677778887 58999999999999999999999998 443 34 556677777777777
Q ss_pred HHHHHHhccCccccccc
Q 009978 502 ALFYIIFSTGERVNFDE 518 (521)
Q Consensus 502 ~~~~~~~~~~~~~~~~~ 518 (521)
.++.+++++.++++.+|
T Consensus 488 ~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 488 GILTLFLPETKGVPLPE 504 (505)
T ss_pred HHHHHcCcCCCCCCCCC
Confidence 66666666655555443
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=5.9e-31 Score=255.43 Aligned_cols=346 Identities=30% Similarity=0.470 Sum_probs=292.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~ 183 (521)
+.+..+..........+..|.+.+++|.++.+.+++.+...++..+++++.|+++||+|||+.+.++.++..++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 45566777778888899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
. ++++.+++.|++.|++.+...+...+++.|++|+|+|++.+++.....++|..+++.+++.+.+..+||+.+++.++
T Consensus 84 ~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 84 A--SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred h--ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 8 89999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (521)
..++..+...+.. |.++...+..++........
T Consensus 162 ~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~ 194 (352)
T cd06174 162 LGLLLALLLLFLL-----------------------------------------------RLLLLLALAFFLLSFGYYGL 194 (352)
T ss_pred HHHHHHHHHHHHH-----------------------------------------------HHHHHHHHHHHHHHhHHHHH
Confidence 8777665554431 45667777788888888899
Q ss_pred HHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhH
Q 009978 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (521)
Q Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
..+.|.+.++.+|.+..+.+.......++..++.++.+++.||+++|+ . ....+.....+........++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~~~~~~~~~~~ 266 (352)
T cd06174 195 LTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR-------L-LLLIGLLLAALGLLLLALAPSLA 266 (352)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------H-HHHHHHHHHHHHHHHHHHhccHH
Confidence 999999999977999999999999999999999999999999999882 0 33444444444444444444444
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 009978 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA 502 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (521)
......++.....+...+.......+..| ++|++..|+.+....++..+++.+.|.+.|..| +...+.+.+++.+++.
T Consensus 267 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~ 345 (352)
T cd06174 267 LLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLAA 345 (352)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHH
Confidence 44444444444455556666677777776 799999999999999999999999999999877 8889998888887777
Q ss_pred HHHHH
Q 009978 503 LFYII 507 (521)
Q Consensus 503 ~~~~~ 507 (521)
+..+.
T Consensus 346 i~~~~ 350 (352)
T cd06174 346 LLLLL 350 (352)
T ss_pred HHhee
Confidence 66543
No 63
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=1.4e-30 Score=255.89 Aligned_cols=365 Identities=15% Similarity=0.117 Sum_probs=266.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l 180 (521)
+.+++...+..++.....++.+|.+++++|.++.+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45566677777788888899999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhhcc-ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc--------
Q 009978 181 TPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-------- 251 (521)
Q Consensus 181 ~~~~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------- 251 (521)
+..+. .++++.+++.|++.|+|.|...+..+.++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 54331 268999999999999999999999999999999999999999999999999999999999887532
Q ss_pred ------------------cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCC
Q 009978 252 ------------------AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATV 313 (521)
Q Consensus 252 ------------------~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (521)
.+||++|++.+++.++..++..+. +. |+.+++ ++ ++.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~-p~~~~~-------------------~~--~~~~~ 221 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KM-PALNHS-------------------DA--KQISF 221 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-CCCCcc-------------------cc--ccccc
Confidence 369999999988776654443322 21 211100 00 00111
Q ss_pred CchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 009978 314 IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY-HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT 392 (521)
Q Consensus 314 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~ 392 (521)
.++.++++|+|.++...+..+++........++++.|.++.. +.+....+...+....+..+|+++++++.||+++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~- 300 (410)
T TIGR00885 222 SASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK- 300 (410)
T ss_pred hhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-
Confidence 224557889999999888888888888888899999997632 333344455566667788999999999999998872
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHH
Q 009978 393 SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAIL 472 (521)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 472 (521)
++.+...+..+..+.....+.....+...+++. +.+..+|..+....+..+++..++.+...+. .+|+.+
T Consensus 301 --------~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~gl-f~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~ 370 (410)
T TIGR00885 301 --------VLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSA-FMSLMFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGI 370 (410)
T ss_pred --------HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-Hhccch
Confidence 233333333333333333333333333344444 4444446666666666665554433333332 399999
Q ss_pred HHHHHHHHhhcc-----cchHHHHHHHHHHHH
Q 009978 473 GTVGAGFFVELV-----GSFQGFLLLTSLLYF 499 (521)
Q Consensus 473 ~~~~~g~l~~~~-----g~~~~~~~~~~~~~~ 499 (521)
+|++.|.+.|.. |+++..|++...+.+
T Consensus 371 ~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 371 VPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 999999999954 347777776554443
No 64
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=9.3e-32 Score=262.67 Aligned_cols=346 Identities=17% Similarity=0.197 Sum_probs=257.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhh-hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhh
Q 009978 103 MLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (521)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~ 181 (521)
..++..+........+.+..|. +.+++|+|+.+.+++.+++.++..+++++.|+++||+|||+++.++.++..++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4556666777777889999995 889999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccc-chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh----------
Q 009978 182 PWAADT-SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS---------- 250 (521)
Q Consensus 182 ~~~~~~-~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---------- 250 (521)
+++ + +++.+++.|+++|++.+. .+...+++.|++|+++|++++++.....++|..+++.+++.+..
T Consensus 85 ~~~--~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 85 GLA--VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHH--hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 888 8 999999999999999654 56678999999999999999999998888888888888776654
Q ss_pred ccCchhHH-HHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHH
Q 009978 251 QAGIFGPF-VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSI 329 (521)
Q Consensus 251 ~~gw~~~f-~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (521)
..+||+.| +..+++.++..++.+...++.|+++++.++.+ ... .....++...+..++.+++|.++..
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLS-------FKG----ARWSVGTGALGDQLKVFRDRHTWIL 230 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcc-------ccc----ccccccchhHHHHHHHHhccchhhH
Confidence 24899999 44455555444444444455443221100000 000 0000011111255678889999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHH
Q 009978 330 IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAP 409 (521)
Q Consensus 330 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 409 (521)
.+..++.......+..+.|.|+++.+|+++.+++.+..+..+..++++++.|++.||+++|+ ...........
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-------~~~~~~~~~~~ 303 (366)
T TIGR00886 231 ALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR-------KLLMSFLGVAM 303 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch-------hHHHHHHHHHH
Confidence 88888777777888899999999988999999999888999999999999999999999872 23333333333
Q ss_pred HHHHHHHhccc--hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHH
Q 009978 410 GIALIGLTAAK--SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFA 469 (521)
Q Consensus 410 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 469 (521)
+..++.+.... +....+....+.....+...........+..|+++|+++|+.+...++|
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 304 GAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 33333333332 3333333334444444555566667777888899999999999887765
No 65
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=5e-31 Score=258.66 Aligned_cols=376 Identities=14% Similarity=0.094 Sum_probs=264.7
Q ss_pred HHHHHHHhhhhhhhhhhhh-hhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh
Q 009978 105 ALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~ 183 (521)
....++.........+.+| ++.+++|++..++|++.+.+.++..+++++.|+++||+|||+++.++.++.+++.++..+
T Consensus 13 ~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 13 LASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 3445555555556666655 456789999999999999999999999999999999999999999999999999888888
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
. ++++.++++|++.|.+.+...+...++..|.+|+++|++++++.....++|..+||++++++.+ .+|+..|++.++
T Consensus 93 ~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~ 169 (395)
T PRK10054 93 V--NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAI 169 (395)
T ss_pred H--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHH
Confidence 8 8899888899999888787788899999999999999999999999999999999999999875 699999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (521)
+.++..++..+..++.++++++ ++ + ...+.++.+++|.++...+..++.......+
T Consensus 170 ~~~i~~i~~~~~~~~~~~~~~~---~~----------------~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 225 (395)
T PRK10054 170 CSAFPLVFIQIWVQRSEKAIAT---ET----------------G-----SVWSPSVLLQDKALLWFTCSGFLASFVSGAF 225 (395)
T ss_pred HHHHHHHHHHHHHhcccccccc---ch----------------h-----hhhhhhhhccCceehHHHHHHHHHHHHHHHh
Confidence 7776655544444333221110 00 0 0012256788999988888777777766666
Q ss_pred HHHHHHHHHHH--hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc-cc
Q 009978 344 LSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA-AK 420 (521)
Q Consensus 344 ~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 420 (521)
..+.+.|..+. .+.+....+.+.....+.........+++.||.++| .....+.....+.+..+.. .+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~ 296 (395)
T PRK10054 226 ASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFIFSGN 296 (395)
T ss_pred hhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHHHcch
Confidence 66777777543 344555566666666666666677888888988777 2223333333333333322 23
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 009978 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYF 499 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 499 (521)
+.+...+...+.........+.......+..| +.++++++..+ ...+|..+||.++|.+.|+.| +...|++.+.+..
T Consensus 297 ~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~ 374 (395)
T PRK10054 297 SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIV 374 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHH
Confidence 33322222222222223334455556666666 58899988755 677999999999999999997 7777766555444
Q ss_pred HHHHHHHHhccCccccccccc
Q 009978 500 LSALFYIIFSTGERVNFDEAA 520 (521)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~ 520 (521)
++.++. +++.+.++|.+.+
T Consensus 375 ~~~~~~--~~~~~~~~~~~~~ 393 (395)
T PRK10054 375 AAWLLM--LKGMRARPWGQPA 393 (395)
T ss_pred HHHHHH--HhccccCcccCCc
Confidence 333332 3455555665544
No 66
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-32 Score=267.10 Aligned_cols=405 Identities=20% Similarity=0.185 Sum_probs=325.1
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHH
Q 009978 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (521)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~ 172 (521)
...+.|.+++..++...........++.+.+.++++++.+.++++|+.++......+.+++.+.+.||+|.|++.+.|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 44567888888888888888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHH-HHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc
Q 009978 173 LWSLATFLTPWAADTSLLALLAM-RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (521)
Q Consensus 173 ~~~~~~~l~~~~~~~~~~~l~~~-r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 251 (521)
+..++.++..++ +++|.+++. -++.|+|.|+.+.....++..+| +++|+.+.|+...+.++|..+-|.+..++.+.
T Consensus 120 v~~~g~~lssF~--~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 120 VAALGLLLSSFA--TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHH--hhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 999999999999 999887654 78999999999999999999999 58999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHH---H--------hh-ccc---c---------ccCCC
Q 009978 252 AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL---R--------EK-QKP---L---------LMGNK 307 (521)
Q Consensus 252 ~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~-~~~---~---------~~~~~ 307 (521)
+|||+.+++.+.+.+-..+......|..++..+. ..++.+... + +. .+. . ..+.+
T Consensus 197 ~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (509)
T KOG2504|consen 197 YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGP 275 (509)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCC
Confidence 9999999999998877777777776644433222 000000000 0 00 000 0 00000
Q ss_pred CCCC--CCCchH----HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHH
Q 009978 308 HKPA--TVIPPF----RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGG 381 (521)
Q Consensus 308 ~~~~--~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g 381 (521)
.+.. ...... .+++++|.++.+.+...+...++.....++|.|..+ .|++..+++.+.++.++..++++++.|
T Consensus 276 ~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G 354 (509)
T KOG2504|consen 276 DKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILG 354 (509)
T ss_pred ccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhh
Confidence 0000 111122 478999999999999999999999999999999997 899999999999999999999999999
Q ss_pred HHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHh
Q 009978 382 LLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (521)
Q Consensus 382 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g 460 (521)
++.|+...+ +..+..++++..++..+..+...+.+.+....++.+...+...........+..+ ++...++|
T Consensus 355 ~laD~~~~~-------~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~G 427 (509)
T KOG2504|consen 355 LLADKPGIR-------ALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYG 427 (509)
T ss_pred hhcCccccc-------hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHH
Confidence 999998754 3356667777777777777776666555555444444444444455455556655 78899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 461 ISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 461 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
+...+..++..+||++.|.+.|..|+|...|++++++.+++..++++.+
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999999999999988777665
No 67
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-33 Score=257.18 Aligned_cols=380 Identities=16% Similarity=0.181 Sum_probs=291.2
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH
Q 009978 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (521)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~ 173 (521)
.+..+..+.++++...++.++++.+....+.+.+.+|++++..|++.+.+.+.+.+.+|++|+++|||+||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34456788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 174 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
+.++.++++++ ..+|+++++|.+.|+|.+...+..+++++|.+|.++|++.+++++....+|..+|.+.+..+....+
T Consensus 108 W~~Av~~~~fs--~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 108 WTLAVFASGFS--NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred -chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHH
Q 009978 254 -IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVA 332 (521)
Q Consensus 254 -w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 332 (521)
|||.|++.+++.++..++.+++.+|+++...+..+.+ .+.........++++.+.+++.+....+.
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~-------------~~~~~~~ts~~kDl~~l~~~~v~v~~sl~ 252 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGE-------------NKMVKPFTSVWKDLKVLAKIKVFVLSSLG 252 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCcccccccccccC-------------CcCCCCccchHHHHHHHHccCceeeehHH
Confidence 9999999999999998888888777654322111100 01112334456777788888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCc--chhHHHHHHHHHH
Q 009978 333 NAMHSWGFFVILSWMPIYFNFV---YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSV--TLTRKILQSIGFI 407 (521)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~--~~~~~~~~~~~~~ 407 (521)
+....+....+..|.|.+.... .|.+.....++..+...++.+|.+++|.++||+.+..... ..........+..
T Consensus 253 ~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~ 332 (493)
T KOG1330|consen 253 IIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAP 332 (493)
T ss_pred HHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhh
Confidence 7777777777777777665432 3556666777778888899999999999999987642221 1111123333333
Q ss_pred HHHHHHHHHhccc--hhHHHHHHHHHHHHHHhhhhhhhHHHHH-hhhccchhhHHhHHHHHHHH-HHHHHHHHHHHHhhc
Q 009978 408 APGIALIGLTAAK--SPVMASAWLTLAIGMKSFSHSGFLVNLQ-EIAPQYSGVLHGISNTAGTF-AAILGTVGAGFFVEL 483 (521)
Q Consensus 408 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~ 483 (521)
.....+..+.... +.+..+++++++.......+....-+.. -++|++|.+++++...+..+ |.+-+|.+.|.+.|.
T Consensus 333 ~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 333 LSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 4444444333332 2333444444555555555554444434 44568999999998888774 555555599999987
Q ss_pred ccchH
Q 009978 484 VGSFQ 488 (521)
Q Consensus 484 ~g~~~ 488 (521)
.-++.
T Consensus 413 l~g~~ 417 (493)
T KOG1330|consen 413 LRGYK 417 (493)
T ss_pred hhCCC
Confidence 54344
No 68
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=7.2e-30 Score=250.06 Aligned_cols=357 Identities=12% Similarity=0.046 Sum_probs=260.1
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcch----HHHHHHHHHHHHHHhhhhh
Q 009978 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK----IIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr----~~~~~~~~~~~~~~~l~~~ 183 (521)
++..+.....+.+.+|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.+...+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 444445556888899999999999999999999999999999999999999999984 3333222222 2222333
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
. +++|.+++.|++.|++.+...+...+++.++ +++|+++++......++|..+||++++++.+++|||..|++.++
T Consensus 91 ~--~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 91 A--HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred c--ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 4 7899999999999999888899888888877 45788889999999999999999999999999999999988876
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (521)
..++..+. ....|+.+++.+ + +++.++...++++++|+|.+|...+..++........
T Consensus 167 ~~~~~~~~-~~~~~~~~~~~~----~-----------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 224 (382)
T PRK11128 167 GVASMLLG-QLLRPTIMPQGE----S-----------------RQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAY 224 (382)
T ss_pred HHHHHHHH-HHccCCCCCccc----c-----------------ccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhH
Confidence 55444333 223333211100 0 0001112346789999999999888888777777778
Q ss_pred HHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhH
Q 009978 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (521)
Q Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
..+.|.|+++ .|.+..+.+...+...++.++..++.+++.||++++ ..+..+....++..+.+...++.+
T Consensus 225 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T PRK11128 225 YGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGSTTALP 294 (382)
T ss_pred HHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHhhhhHH
Confidence 8888999977 799999999998888888888889999999999888 233344444444444455555555
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHH-HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 009978 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTA-GTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA 502 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (521)
..+...++.....+...+....+..+..++++++..+..+.. ..+|..+||.+.|.+.|..| . ..++..+++.+.+.
T Consensus 295 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 295 WLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHH
Confidence 554444444443444455555666666666778889988744 56777999999999999987 4 45666665555544
Q ss_pred HH
Q 009978 503 LF 504 (521)
Q Consensus 503 ~~ 504 (521)
++
T Consensus 373 ~~ 374 (382)
T PRK11128 373 FI 374 (382)
T ss_pred HH
Confidence 33
No 69
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-31 Score=258.06 Aligned_cols=293 Identities=19% Similarity=0.242 Sum_probs=249.3
Q ss_pred cccchhHHHHHHHHHHHHHHhhhhhhhhh-hhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHH
Q 009978 92 FITSERVKVVSMLALALALCNADRVVMSV-AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (521)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~ 170 (521)
..++-.+.++..++..++....+...++- .+..+.+|.+....+.+.+.+++.++++++.+++|.+.||++..+.+...
T Consensus 38 l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~ 117 (495)
T KOG2533|consen 38 LLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVS 117 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHH
Confidence 34445566666677777777777665443 35557789999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhh-
Q 009978 171 VALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM- 249 (521)
Q Consensus 171 ~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~- 249 (521)
.+++++..++.... +|++.+++.|++.|+..+..+|....+++.|+.+++|+..++++.+..++|.++|.+++..+.
T Consensus 118 ~~~w~~~~~~~~~~--~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533|consen 118 GILWGLFGFLTAAV--HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred HHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh
Confidence 88888888777777 999999999999999999999999999999999999999999999999999999999998863
Q ss_pred -----hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcc
Q 009978 250 -----SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKM 324 (521)
Q Consensus 250 -----~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (521)
...||||.|++.++++++..++.++..|+.|++..-.+++|++...++.++.. .....++.....+++.+++|
T Consensus 196 ~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~dp 273 (495)
T KOG2533|consen 196 LNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESP--SGGIENKFKWKGFKEALKDP 273 (495)
T ss_pred hcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhcc--CCCcccccCHHHHHHHHhch
Confidence 35689999999999999999999999999998776666666554433333221 11111225677889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (521)
.+|...++.++.....+++.+|+|.|+++..|++..++..+.....++++++.+++|+++||++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999966799999999999999999999999999999953
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=1.4e-30 Score=252.97 Aligned_cols=333 Identities=16% Similarity=0.185 Sum_probs=247.6
Q ss_pred hhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHH
Q 009978 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (521)
Q Consensus 116 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 195 (521)
..+++.+|.+.+++|.|.++.|++.+++.++..+++++.|+++||+|||+++.++.++..++.+.+ .. ++++.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~--~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA--PGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh--ccHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999998888887776 66 788999999
Q ss_pred HHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc--CchhHHHHHHHHHHHHHHHHH
Q 009978 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWL 273 (521)
Q Consensus 196 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--gw~~~f~~~~~~~~i~~i~~~ 273 (521)
|++.|++.+...+....++.|++| ++|++++++++....+|..+++.+++.+.+.. +||+.|.+.+++.++.....
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~- 171 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAW- 171 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-
Confidence 999999999888888889999986 68999999999999999999999999887765 39999887776544432221
Q ss_pred HhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 274 SATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNF 353 (521)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 353 (521)
.++.+++++. + ++......++.+|+|.++...+..++....+.....++|.|+++
T Consensus 172 --~~~~~~~~~~-------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~ 226 (355)
T TIGR00896 172 --IPQVRRRVAA-------------------N----QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS 226 (355)
T ss_pred --hhhhccccCC-------------------C----CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222111100 0 00011223467788888887777777777788888999999988
Q ss_pred HhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 009978 354 VYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAI 433 (521)
Q Consensus 354 ~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (521)
.|++..+.+...+...++.++++++.|++.||+++|+ .....+....++..+.+....+........+.+.
T Consensus 227 -~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 297 (355)
T TIGR00896 227 -HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR--------GIVAVLAVLQLVGLCGLLFAPMHGLWAWALVLGL 297 (355)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch--------HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 6999999999999999999999999999999996542 1222222222222222222222222222233333
Q ss_pred HHHhhhhhhhHHHH-Hhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009978 434 GMKSFSHSGFLVNL-QEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (521)
Q Consensus 434 ~~~~~~~~~~~~~~-~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 488 (521)
+. +...+...... .+..+ ++++...++.+...+++..++|.+.|.+.|+.|+|.
T Consensus 298 ~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 298 GQ-GGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred hh-hhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 33 23333333333 33333 577899999999999999999999999999988654
No 71
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=8.2e-30 Score=253.60 Aligned_cols=379 Identities=20% Similarity=0.174 Sum_probs=292.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l 180 (521)
+..++.+.+++.+...+.....+.+..+..-|+..++++.++..+...+.++++|.++||++|||+++.+.++.++..++
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 33455667777777778888888888888999999999999999999999999999999999999999998877665443
Q ss_pred hhh---ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhH
Q 009978 181 TPW---AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (521)
Q Consensus 181 ~~~---~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~ 257 (521)
.++ ....+.+.+++.-++.|++.+...|+.++++.+..|+++...++++.+...++..++||.++|.+...+|-.+.
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~ 171 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAA 171 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 322 22257888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHH
Q 009978 258 FVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (521)
Q Consensus 258 f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 337 (521)
|.+.++..++.++......++.+++.. .+ +...+..+..++.+.++|.+...++..++..
T Consensus 172 f~inalsfl~~i~~l~~~~~~~~~~~~--~~------------------e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKPPPPPSSL--PR------------------ERFFSALREGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred HHHHHHHHHHHHHHHHHcccccccccc--ch------------------hhhhhhHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 999887766654444433322211110 00 0011223345666777887777766666666
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 009978 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
+....+...+|.+.++.+|.++...|++.+..+++.++|.++.+++.+|++++ .++..+.+..++.++.+.
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~---------~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR---------RLVLLASLLFALALLLLA 302 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc---------hhhHHHHHHHHHHHHHHh
Confidence 66666777899999999999999999999999999999999999988887665 233445556666666677
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 009978 418 AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSL 496 (521)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 496 (521)
..++.+.....+++.+...........+..++..| +.+|++++++.++...+..+|..+.|.+.+..| ....+.+.++
T Consensus 303 l~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~ 381 (524)
T PF05977_consen 303 LSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGA 381 (524)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 76776665555555444444444455555555555 699999999999999999999999999999998 7777887777
Q ss_pred HHHHHHHHHHHhc
Q 009978 497 LYFLSALFYIIFS 509 (521)
Q Consensus 497 ~~~~~~~~~~~~~ 509 (521)
..+++.++....+
T Consensus 382 ~lll~~~~~~~~~ 394 (524)
T PF05977_consen 382 ALLLSALIALRFP 394 (524)
T ss_pred HHHHHHHHHHHhc
Confidence 7666666655543
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=6.1e-29 Score=245.25 Aligned_cols=376 Identities=11% Similarity=0.091 Sum_probs=263.3
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-----cchH-HHHHHHHHHHHHH
Q 009978 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKI-IMAWGVALWSLAT 178 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-----Grr~-~~~~~~~~~~~~~ 178 (521)
...++..+.........+|.+.++.|+|.+++|++..+... .+.++++|+++||+ |||| .+.++.++.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 44566777777788889999999999999999999776665 58899999999999 8876 7888888887777
Q ss_pred hhhhhcc-ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc-cCchh
Q 009978 179 FLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFG 256 (521)
Q Consensus 179 ~l~~~~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gw~~ 256 (521)
.++++.. ..+++.+++..++.++..+...++..+++.|++|+++|+++.++...+.++|.++++.+++.+.+. .|||.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 7766652 235777888888888888889999999999999999999999999999999999999999999885 59999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHH
Q 009978 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (521)
Q Consensus 257 ~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 336 (521)
.|++.++..++..+.. +..||+++.+++. + + .+++..+++++++|+|.++..++..++.
T Consensus 163 ~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~-~-~------------------~~~~~~~~~~~l~~~~~~~~~l~~~~l~ 221 (402)
T PRK11902 163 TYLLMAGLMLAGALTT-LWAPEPEVPARPP-R-S------------------LGEAVVGPLRDFFSRRGAWALLLLIVLY 221 (402)
T ss_pred HHHHHHHHHHHHHHHH-HhcCCCccccccc-c-h------------------hHHHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 9999888776654433 3444443221100 0 0 0001224577889999998877776666
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHH-HHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHH-HHHHHHHH
Q 009978 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPW-SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF-IAPGIALI 414 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 414 (521)
.........+.+.++.+.+|+++.+.+++....+ ++.+++.++++++.||+++|+ ........ ......+.
T Consensus 222 ~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~-------~l~~~~~~~~l~~l~~~ 294 (402)
T PRK11902 222 KLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR-------SLMLFGVLQAVSNLGYW 294 (402)
T ss_pred HhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHHH
Confidence 6554444445566676768999999998876654 457889999999999999872 22211111 11112222
Q ss_pred HHhcc-chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 009978 415 GLTAA-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLL 492 (521)
Q Consensus 415 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 492 (521)
.+... ++.+.......+.....+............... +..++..+..+....++..+++.+.|.+.|..| +...|.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~ 373 (402)
T PRK11902 295 VLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYG-WPGFYL 373 (402)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHH
Confidence 22222 333333333222222333333333333333333 244556677777778888878889999999998 899999
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 009978 493 LTSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~ 511 (521)
..+++.++++++.+..+++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 374 MTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9888887776666554443
No 73
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.98 E-value=1.3e-29 Score=250.18 Aligned_cols=358 Identities=17% Similarity=0.128 Sum_probs=254.2
Q ss_pred HHHhhhhhhhhhhhhhhhhhhc--CCcchhhHHHHH-----HHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhh
Q 009978 109 ALCNADRVVMSVAIVPLSLAHG--WSRSFSGIVQSS-----FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (521)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~--~s~~~~g~~~s~-----~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~ 181 (521)
+.++++++.++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888877753 556666665543 233345688999999999999999999999999999999
Q ss_pred hhccccchH--------HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhh----
Q 009978 182 PWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM---- 249 (521)
Q Consensus 182 ~~~~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~---- 249 (521)
+++ ++++ .+++.|+++|++.+...+...+++.|++|+++|++..++.+.+..+|.++++.++..+.
T Consensus 83 ~~~--~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 83 GLL--PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred hhC--CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888 6764 47889999999999999999999999999999999999999999999999998887654
Q ss_pred ----hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcch
Q 009978 250 ----SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP 325 (521)
Q Consensus 250 ----~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (521)
+.++||+.|++.+++.++..+.. ...+|+++.++ +. ++++....++++.+++++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~----------------~~~~~~~~~~~~~~~~~~ 218 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYLR-RNLEETPVFEK-----AQ----------------EKHKKKRGPIRETLTKHR 218 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHH-----HH----------------hccccccCCHHHHHHhch
Confidence 35689999988776655543332 22333321110 00 001112234566777765
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHH
Q 009978 326 --TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (521)
Q Consensus 326 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (521)
++...+..++..........+.|.|+++.+|.+..+.+.......++..++.++.+++.||+++|+ ....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~--------~~~~ 290 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP--------VLII 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH--------HHHH
Confidence 777777777777777788899999998878999999999999999999999999999999999882 1221
Q ss_pred HHHHHHHHH--HH-HHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHH-HHHHHHHHHHHHHHHH
Q 009978 404 IGFIAPGIA--LI-GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGIS-NTAGTFAAILGTVGAG 478 (521)
Q Consensus 404 ~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~-~~~~~~g~~~~~~~~g 478 (521)
......... .+ .+...++.+......++.....+...+.......+..| +.|+++.++. +....+|..++|.+.|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 291 FTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 221111111 11 12222333333333333333344445556666777776 5899999985 4455688889999999
Q ss_pred HHhhcccchHHHHHHHHHHH
Q 009978 479 FFVELVGSFQGFLLLTSLLY 498 (521)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~ 498 (521)
.+.|+.|.+...++...++.
T Consensus 371 ~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 371 ALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHcCcchhHHHHHHHHH
Confidence 99998875655555554443
No 74
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.4e-28 Score=225.29 Aligned_cols=376 Identities=16% Similarity=0.146 Sum_probs=285.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 178 (521)
..+..+....++.++......+.+|.+.+.++++..|.+++..+++.++.+.+++.|++.+|+|+|+.+++++.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34555666677778888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhc-cccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc------
Q 009978 179 FLTPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ------ 251 (521)
Q Consensus 179 ~l~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~------ 251 (521)
.++.-+ ...++..++++-++.|.|.+...++.+.++....++++..+.+++.+...++|.++||++++.+...
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 887422 1268888999999999999999999999999999998889999999999999999999999988762
Q ss_pred -------------cCchhHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchH
Q 009978 252 -------------AGIFGPFVIFGLSGFLWVLVWLSAT-SSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF 317 (521)
Q Consensus 252 -------------~gw~~~f~~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (521)
-.|+++|...+...++..+.....+ |+.++..+ +..+......
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~-----------------------~~~~~~~~~~ 229 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAP-----------------------SLGASGSAGL 229 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccc-----------------------cccccccchH
Confidence 1377888888777666555444332 22211111 0011111156
Q ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchh
Q 009978 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLT 397 (521)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~ 397 (521)
.+++++|+++...++.+++.........|++.|+.+..|.+..+++...+..+.+.++|++++.++.+|+...
T Consensus 230 ~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~------- 302 (422)
T COG0738 230 SSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE------- 302 (422)
T ss_pred HHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-------
Confidence 6899999999999999999999999999999999998899999999999999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHH
Q 009978 398 RKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGA 477 (521)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 477 (521)
..+.....+....++.....++.+...... +.+.+.+..+|...+...+..|++... .|....+..+|+++.|.+.
T Consensus 303 --k~Laf~a~~~ill~~~~~l~~g~v~~~~l~-~ig~F~simfPTIfslal~~l~~~ts~-~s~~l~maivGGAiiP~l~ 378 (422)
T COG0738 303 --KYLAFYALIAILLLLAVALIGGVVALYALF-LIGLFNSIMFPTIFSLALKNLGEHTSV-GSGLLVMAIVGGAIIPPLQ 378 (422)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcChHHHHHHH-HHHHHhHHHHHHHHHHHHhccCccccc-cceeeeeheecchHHHHHH
Confidence 222333333333333333444444444333 444455566677776666666654443 3444566778999999999
Q ss_pred HHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 478 GFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 478 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
|++.|..| ....+.....++.+-++.+.+..
T Consensus 379 G~i~d~~g-~~~~~~~~pllc~lyV~~~~~~~ 409 (422)
T COG0738 379 GVIADMFG-IQLTFLIVPLLCYLYVLFFALIG 409 (422)
T ss_pred HHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998 44554444444444443333333
No 75
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=3.2e-29 Score=248.82 Aligned_cols=377 Identities=15% Similarity=0.076 Sum_probs=242.8
Q ss_pred HHHHHHhhhhhhhhhhhhhh-hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh-
Q 009978 106 LALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW- 183 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~- 183 (521)
+..++..+......+.+|.+ .+++|+|+.++|++.+++.++..++++++|+++||+|||++++++..+.+++......
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444555565554 5559999999999999999999999999999999999999998876665544332111
Q ss_pred cccc-----chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHH
Q 009978 184 AADT-----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (521)
Q Consensus 184 ~~~~-----~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f 258 (521)
...+ .+...++++++.|.+.....+....+..+. .+++++.++......++|..++|++++.+.+ .+|+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f 173 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINF 173 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhH
Confidence 1001 111123334444444333334444443322 3456778889999999999999999999876 4899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHH
Q 009978 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (521)
Q Consensus 259 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 338 (521)
++.+++.++..++.+...++++++... ++++ .+++++...++.++.+|+|.++.+.+..+....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------------~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~ 237 (420)
T PRK09528 174 WLGSGSALILLVLLFFAKPDAPSTAKV-ANAL---------------GANASAVSLKDALALLKLPKFWFLVLYVIGVAC 237 (420)
T ss_pred HHHHHHHHHHHHHHhcccccccchhhh-ccch---------------hcccccccHHHHHHHccCCCeEeehHHHHHHHH
Confidence 998887776665555544443322110 0000 000111223456678889988776666655555
Q ss_pred HHHHHHHHHHHHHHHHh---CCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 009978 339 GFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (521)
.+.....+.|.|+.+.+ +.+..+.+.+.++..++..++.++.|++.||+++|+ ....+..+.++....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~l~~~~~~l 308 (420)
T PRK09528 238 FYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN---------ALLLAGTIMAVRIIG 308 (420)
T ss_pred HHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch---------hhHHHHHHHHHHHHH
Confidence 55556667788777643 455567788888888888999999999999999983 223333333334344
Q ss_pred HhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhH-HHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Q 009978 416 LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGI-SNTAGTFAAILGTVGAGFFVELVGSFQGFLLL 493 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 493 (521)
....++.+..+...++..............+..+..| +.+++..+. +++...+|.+++|.+.|++.|..| |...|..
T Consensus 309 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~ 387 (420)
T PRK09528 309 SGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLI 387 (420)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHH
Confidence 4444555544333333322222333333444455444 677777665 677788999999999999999988 9999998
Q ss_pred HHHHHHHHHHHHHHhccC
Q 009978 494 TSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~ 511 (521)
.+++.++..++.+...++
T Consensus 388 ~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 388 LGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 888777666555544433
No 76
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.97 E-value=5.1e-28 Score=238.38 Aligned_cols=375 Identities=15% Similarity=0.082 Sum_probs=255.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhh-hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhh
Q 009978 103 MLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (521)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~ 181 (521)
.+....++.+.....+.+.+|.+ .+++|.++.+.|++.+++.++..++++++|+++||+|||+.++.+....+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34445555666666777777765 45689999999999999999999999999999999999999988776665543322
Q ss_pred ---hhcc---ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCch
Q 009978 182 ---PWAA---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (521)
Q Consensus 182 ---~~~~---~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~ 255 (521)
.+.. .+.+..+++.+++.|++.+...+....+..+.. ++++..++......++|.++||++++.+.+ .+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~ 162 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQ 162 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCch
Confidence 1110 012334567788999998888888888877754 334567788888889999999999998865 5999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHH
Q 009978 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (521)
Q Consensus 256 ~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 335 (521)
..|++.+++.++..++.+...++++++++. ++ . .+.++++...+++++++|+|.++.+.+..++
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~-------~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 226 (396)
T TIGR00882 163 IVFWLGSGFALILMLLLMFAKPKAPSSATV---AN------A-------LGANASAFSLKLALELFRQRKFWMFVLYVVG 226 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhhh---hc------c-------cccccCCCCHHHHHHHHcCCcHHHHHHHHHH
Confidence 999999888777665555444443221100 00 0 0001112233467889999998887777766
Q ss_pred HHHHHHHHHHHHHHHHHHHh---CCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHH
Q 009978 336 HSWGFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIA 412 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (521)
....+.....+.+.|+++.+ +.+....+...++..+...++.+..+++.||+++|+ ...++..+.++.
T Consensus 227 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~---------~l~~~~~l~~l~ 297 (396)
T TIGR00882 227 VACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN---------ALLIAGTIMSVR 297 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHHH
Confidence 66666667677888888754 445556788888888888889999999999999883 223333333333
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhH-HHHHHHHHHHHHHHHHHHHhhcccchHHH
Q 009978 413 LIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGI-SNTAGTFAAILGTVGAGFFVELVGSFQGF 490 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 490 (521)
.......++.+......++..............+..+..+ +.+++..+. .+....+|+++++.+.|++.|..| +...
T Consensus 298 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~ 376 (396)
T TIGR00882 298 IIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGA 376 (396)
T ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHH
Confidence 3333334444443333322222222222222233344333 466666665 678889999999999999999988 8999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009978 491 LLLTSLLYFLSALFYI 506 (521)
Q Consensus 491 ~~~~~~~~~~~~~~~~ 506 (521)
|.+.+++.++..++..
T Consensus 377 f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 377 YLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998888777665543
No 77
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1e-27 Score=216.09 Aligned_cols=360 Identities=17% Similarity=0.246 Sum_probs=284.2
Q ss_pred hhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHH
Q 009978 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (521)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 192 (521)
-....+++.++.+.+++|+|.+..|++.++..++..+.+++..++..|+|.++.+..++++.+++.++-.. .+.+.+
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~---~~~~~L 102 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL---GGLPLL 102 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc---ccHHHH
Confidence 45567889999999999999999999999999999999999999999999999999999999999998766 467888
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-CchhHHHHHHHHHHHHHHH
Q 009978 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVLV 271 (521)
Q Consensus 193 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gw~~~f~~~~~~~~i~~i~ 271 (521)
+.+-.+.|.|.+...+...+++-+.|| ++-+..+|+|....++|..+++.+...+.++. |||....+-+.++++.++.
T Consensus 103 ~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 103 FLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999996 67899999999999999999999999988877 7999999999998888777
Q ss_pred HHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 272 WLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYF 351 (521)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 351 (521)
++.-. .+++ .. ..+....+-..++|+|..|.+.+.+.+.+..++....|+|.++
T Consensus 182 WlPq~-~r~~-~~------------------------~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~il 235 (395)
T COG2807 182 WLPQA-LREQ-AA------------------------SIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAIL 235 (395)
T ss_pred Hhhhc-cccc-cc------------------------ccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 66542 1110 00 0011111223688999999999999999999999999999999
Q ss_pred HHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHH--HhccchhHHHHHHH
Q 009978 352 NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG--LTAAKSPVMASAWL 429 (521)
Q Consensus 352 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 429 (521)
.| .|+|..++|.+.+...+..+...+....+.+|...++ ...........+.++. +...+.++.. .+
T Consensus 236 i~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r--------~~~~~~~~~~l~G~~G~~~~P~~~~~lw--~~ 304 (395)
T COG2807 236 ID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR--------PLVVLALLLMLVGLVGLLLAPGQLPILW--AL 304 (395)
T ss_pred HH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc--------hHHHHHHHHHHHHHHHHHHhhhhHHHHH--HH
Confidence 99 7999999999999999999999999999999865552 2222222222222222 2222333322 34
Q ss_pred HHHHHHHhhhhhhhHHH-HHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 430 TLAIGMKSFSHSGFLVN-LQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 430 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
+++.+.++.+......+ .....|+..+.-.|+.+.++++-..+||.+.|++.|..|+|...+.....+.+...+.-+..
T Consensus 305 llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 305 LLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 45554444443333322 33334568899999999999999999999999999999999999888887777766666655
Q ss_pred ccCcc
Q 009978 509 STGER 513 (521)
Q Consensus 509 ~~~~~ 513 (521)
.|++.
T Consensus 385 ~r~~~ 389 (395)
T COG2807 385 GRNRY 389 (395)
T ss_pred chhHH
Confidence 54443
No 78
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.3e-29 Score=230.06 Aligned_cols=349 Identities=20% Similarity=0.176 Sum_probs=275.1
Q ss_pred hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcc
Q 009978 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (521)
Q Consensus 126 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~ 205 (521)
.++.+-+++++|++.+.+.+.+.+.+++.|.++||+|+|..+++|++++..+++++++. ++++.++++|.+||+|.+.
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg--~sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG--NSYPMLFVARSLQGVGSAF 175 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc--chhHHHHHHHHHhhhhHHH
Confidence 44567788999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhHHHHHHHhcCCchh-hHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 009978 206 ALPAMNNMVARWFPQTE-RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP 284 (521)
Q Consensus 206 ~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~ 284 (521)
..++..++++|.+|+++ |++++|+...+.++|.++||++||.+.+..|.+.+|++.++++++-..+.++..+..+..+
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~- 254 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP- 254 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc-
Confidence 99999999999998764 7999999999999999999999999999999999999999999988877777654432221
Q ss_pred CCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh
Q 009978 285 QISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW 364 (521)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 364 (521)
+......++++++++|.++.........+.........++.+..|.+..+..+.|+
T Consensus 255 ------------------------~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~ 310 (464)
T KOG3764|consen 255 ------------------------DSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGL 310 (464)
T ss_pred ------------------------cccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceee
Confidence 11223346789999999998888877777778888888899888888855668999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH-HHHHHHHhhhhhhh
Q 009978 365 FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWL-TLAIGMKSFSHSGF 443 (521)
Q Consensus 365 ~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 443 (521)
.+....+...++..+.|.+.||++.. |......+.+..+..+......++...+++-. .++.+.........
T Consensus 311 ~fLp~~~~y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~ 383 (464)
T KOG3764|consen 311 AFLPASLSYAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLI 383 (464)
T ss_pred eecccccchhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHh
Confidence 98899999999999999999999954 22455566666665555555554443322221 11222111111111
Q ss_pred HHHHHhhhc---c---chhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 444 LVNLQEIAP---Q---YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 444 ~~~~~~~~~---~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
......+.+ + ..|.++++......+|.++||.++|.+.+..| +.+...+.++..++-.-++.+++
T Consensus 384 P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 384 PTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred hhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 2 57899999999999999999999999999999 88877777777666555544443
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=1e-27 Score=236.50 Aligned_cols=368 Identities=13% Similarity=0.027 Sum_probs=248.1
Q ss_pred HHHHHHHHhhhhhhh-hhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcc-hHHHHHHHHHHHHHHhhh
Q 009978 104 LALALALCNADRVVM-SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATFLT 181 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Gr-r~~~~~~~~~~~~~~~l~ 181 (521)
+++.+++.+.....+ ++..+.+.+++|++..++|++.+++.++..++++++|+++||+|+ |+++.++.++..++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 345556666666666 445556667799999999999999999999999999999999965 778888888888888888
Q ss_pred hhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhc--------CCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARW--------FPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
.+. ++++.+++.|++.|++.+...+...++..++ .....|.+.+| .+|.++||.+++.+....+
T Consensus 87 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~ 158 (418)
T TIGR00889 87 AQV--TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS 158 (418)
T ss_pred HHh--cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch
Confidence 887 8899999999999998877777666654322 22223444444 4788999999988843333
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHH
Q 009978 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (521)
Q Consensus 254 w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 333 (521)
|+ +|++.++..++..++ .+..||.|+.+++.+.. .++....+.++++|+|.++.+.+..
T Consensus 159 ~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~-------------------~~~~~~~~~~~~~k~~~~~~~~~~~ 217 (418)
T TIGR00889 159 NI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMS-------------------IKVMLGLDAFILFKNKRMAIFFFFS 217 (418)
T ss_pred hH-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccC-------------------HHHHhhhhHHHHhcCCCeeeHHHHH
Confidence 54 455666655554443 33455544321110000 0000111345678999988888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCc--------ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHH
Q 009978 334 AMHSWGFFVILSWMPIYFNFVYHIDL--------RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (521)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (521)
++..........+.+.|+++ .|.++ ...+...++..+..+++.++.+++.||+++| .++..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~ 287 (418)
T TIGR00889 218 MLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLS 287 (418)
T ss_pred HHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHH
Confidence 77766666677788888877 56554 4568888888899999999999999999988 333444
Q ss_pred HHHHHHHHHHHhccc-h---hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHH-HHHHHHHHHHHHHHHH
Q 009978 406 FIAPGIALIGLTAAK-S---PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISN-TAGTFAAILGTVGAGF 479 (521)
Q Consensus 406 ~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~-~~~~~g~~~~~~~~g~ 479 (521)
.++.++....+.... . .+..+...++.....+...+....+..+..| +.|++++|+.+ ....+|.++||.+.|.
T Consensus 288 ~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~ 367 (418)
T TIGR00889 288 LVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGV 367 (418)
T ss_pred HHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 444444333333221 1 1222222222222233334444555566666 69999999997 5678999999999999
Q ss_pred Hhhcccc-----hHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 480 FVELVGS-----FQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 480 l~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
+.|+.|+ |+..|.+.+++.+++.++.+++.+
T Consensus 368 l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 368 MVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9998653 788888887777666665554433
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=2.3e-28 Score=272.07 Aligned_cols=370 Identities=14% Similarity=0.053 Sum_probs=251.0
Q ss_pred HHHHHHHhhhhhhhhhhhh-hhhhhhcCCc-chhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHH---HHHHHHHHHh
Q 009978 105 ALALALCNADRVVMSVAIV-PLSLAHGWSR-SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW---GVALWSLATF 179 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~-~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~---~~~~~~~~~~ 179 (521)
++..+.+++....+..... .+..+.+.+. ...++..+++.+++.++++++|+++||+|||+++.. ..++..+..+
T Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~ 100 (1140)
T PRK06814 21 FFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI 100 (1140)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444433333322 3334443333 457888899999999999999999999999997643 2222222223
Q ss_pred hhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHH
Q 009978 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (521)
Q Consensus 180 l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~ 259 (521)
..... ++++.++++|+++|++.+...|+..+++.+++++++|++++|+.+++.++|.++||++++++....+|++.|+
T Consensus 101 ~~~~~--~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~ 178 (1140)
T PRK06814 101 YGFHL--NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVA 178 (1140)
T ss_pred HHHHH--hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 33344 7899999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHH
Q 009978 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (521)
Q Consensus 260 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 339 (521)
..++..++.+++. +..++.+......+... .........++.+.++|.++...+..++.++.
T Consensus 179 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (1140)
T PRK06814 179 LLMGIAVLGWLAS-LFIPKTGNAAPDLKIDR-----------------NIIRSTITLLKYAKADKRIWLAILGISWFWLV 240 (1140)
T ss_pred HHHHHHHHHHHHH-hhCCCCCCCCCCCeecc-----------------chHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 5544444444333 33444332211100000 00001123567888999999998888888888
Q ss_pred HHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHH---
Q 009978 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL--- 416 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 416 (521)
...+..++|.|+++.+|.++...+++.+...++.+++.++.+++.++..+++.. .............+.+
T Consensus 241 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~ 313 (1140)
T PRK06814 241 GAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYV-------PIGALLMGLFGLDLAFASS 313 (1140)
T ss_pred HHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeee-------hHHHHHHHHHHHHHHhccc
Confidence 888889999999998999999999999999999999999999998876555211 1111111111111111
Q ss_pred ---------------hccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 009978 417 ---------------TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFF 480 (521)
Q Consensus 417 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l 480 (521)
....+.+...+..++.+.+.+...+...+..++..| +.+|+++|+.+++..++..+++.+.|.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 314 SVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred ccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 011233333333333333333444445555555555 6999999999999999999999999999
Q ss_pred hhcccchHHHHHHHHHHHHHH
Q 009978 481 VELVGSFQGFLLLTSLLYFLS 501 (521)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~ 501 (521)
.+...++...+++.+++.++.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~ 414 (1140)
T PRK06814 394 QALGFSIPWIILFIALANLIV 414 (1140)
T ss_pred HHhccCHHHHHHHHHHHHHHH
Confidence 865444666666555543333
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=2.1e-26 Score=230.35 Aligned_cols=404 Identities=13% Similarity=0.096 Sum_probs=268.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhh-hh--hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH-hcchHHHHHHHHHHHH
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLS-LA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSL 176 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr-~Grr~~~~~~~~~~~~ 176 (521)
+..+.+..+...+..+...+.+|.+. ++ +|++..+.|++.+.+.++..++++++|+++|| +|||+++.++.++.++
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 34444556666666666666666664 44 89999999999999999999999999999999 8999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchh---hHHHHHHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE---RARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 177 ~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
+.++++++ ++++.++++|++.|+|.|...+...++++|++|+++ |+++++++..+.++|.++||++++++.+.+|
T Consensus 92 g~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 92 GHFMLAMS--IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHhc--ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99998888 788889999999999999999999999999998754 8889999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCCchhHHHHHHHhh----------ccccccCCCCC-----------
Q 009978 254 IFGPFVIFGLSGFLWVLVWLSATSS---TPDRHPQISKYELEYILREK----------QKPLLMGNKHK----------- 309 (521)
Q Consensus 254 w~~~f~~~~~~~~i~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----------- 309 (521)
|++.|.+.++..++..+......+. .+++++..++++.+...... .......+...
T Consensus 170 ~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (475)
T TIGR00924 170 YHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLA 249 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 9999999886555544333332221 11111111111111000000 00000000000
Q ss_pred --------CCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc----chhHhHHHHHHHHHHH
Q 009978 310 --------PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFSAVPWSVMAFTG 377 (521)
Q Consensus 310 --------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~i~~ 377 (521)
..++.....+..|...+..+.+...+.+..+....+.++.+.++..+.+... .+++.++..+..++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~ 329 (475)
T TIGR00924 250 VIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGS 329 (475)
T ss_pred HHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHH
Confidence 0000000011112223455556666666777777777888877754443222 5677788888888887
Q ss_pred HHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc---------cchhHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 009978 378 YLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA---------AKSPVMASAWLTLAIGMKSFSHSGFLVNLQ 448 (521)
Q Consensus 378 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (521)
++..++..|+.+|+.......+. .++.++.+++...+.. ..+.++.+...++.........+.......
T Consensus 330 p~~~~~~~~l~~~~~~~~~~~k~--~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~ 407 (475)
T TIGR00924 330 PVLAMIWTRLGRKGKDPTTPLKF--TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWT 407 (475)
T ss_pred HHHHHHHHHHHhCCCCCCcHHHH--HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 77777777777753322222222 3344444333333321 234444444544444455556666666666
Q ss_pred hhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 449 EIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 449 ~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
+..| +.||+.+|++.....+|..+++.+.+...+..| +...|...++..++..++.++..
T Consensus 408 ~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 408 KIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 6666 589999999999999999999999888777655 77777777776666655554443
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=3.8e-27 Score=263.42 Aligned_cols=356 Identities=18% Similarity=0.135 Sum_probs=247.1
Q ss_pred hhhhhhhhhhhhhcCCc--chhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhh---hhccccchHH
Q 009978 117 VMSVAIVPLSLAHGWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLA 191 (521)
Q Consensus 117 ~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~---~~~~~~~~~~ 191 (521)
....+.+.+..+++.+. ...+++.+++.++..++++++|+++||+|||++++++.++.+++.++. ... ++++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~~ 105 (1146)
T PRK08633 28 HKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL--GWFWL 105 (1146)
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH--ccHHH
Confidence 44455556666666654 447899999999999999999999999999999999887666555443 334 67999
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc--------c-CchhHHHHHH
Q 009978 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--------A-GIFGPFVIFG 262 (521)
Q Consensus 192 l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~-gw~~~f~~~~ 262 (521)
+++.|+++|++.+...++..+++.|++|+++|++++++.+.+.++|.++|+++++++.+. + +|++.+.+..
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 185 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVL 185 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876 2 3444444444
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHH
Q 009978 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (521)
Q Consensus 263 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 342 (521)
+...+..++..+..|+.++......+. ............++.++++|.++...+..++.......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (1146)
T PRK08633 186 LAVAVLGLIFAYRLPKVPAAAPEVFDK---------------KKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQL 250 (1146)
T ss_pred HHHHHHHHHHHhcCcCCCCCCcccccc---------------cccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 333333333333445544332211000 00000011223566788889888888877777777777
Q ss_pred HHHHHHHHHHHHhCCCcc-cchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccch
Q 009978 343 ILSWMPIYFNFVYHIDLR-QASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (521)
Q Consensus 343 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
+..++|.|+.+.+|++.. ..+++.+...++.+++.++.+++.||+++++. +.++.++.++.++.+....+
T Consensus 251 ~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 321 (1146)
T PRK08633 251 AQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL---------VPLGALGLALSLFLLPTAPS 321 (1146)
T ss_pred HHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc---------hhHHHHHHHHHHHHHHHhhh
Confidence 888999999998999998 89999999999999999999999999887632 22233333333333333334
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 009978 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (521)
.+..++..++.+...+...+....+..+..| +.+|+++|+.+++..++.++++.+.+.+.....++...+++.+.+.
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 399 (1146)
T PRK08633 322 LASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVT 399 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4433333333333333444445555555555 6899999999999999998888777766542112344454444433
No 83
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=4.2e-26 Score=224.34 Aligned_cols=369 Identities=13% Similarity=0.065 Sum_probs=260.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHH--HHHHHHHHHHhhhhhH-HHHhHhcchHHHHHHHHHH-HH
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIV--QSSFLWGYLVSPIAGG-TLVDYYGGKIIMAWGVALW-SL 176 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~~~~~i~~~~~G-~l~dr~Grr~~~~~~~~~~-~~ 176 (521)
+..+...++..+.......+.+|.+.++.|.|.+++|++ .++..+...+.+++++ +..||+||||..++...+. .+
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455667788888888899999999999999999999997 3566788878888884 4789999999865554332 21
Q ss_pred HHhhhh-hccccc-hHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 177 ATFLTP-WAADTS-LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 177 ~~~l~~-~~~~~~-~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
.....+ +....+ ..+++...++.++..+...+...++..|..++++++...+....+..+|.++|+.+.+++.+.+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 122222 211122 334445556666777788889999999999888889999999999899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHH
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 334 (521)
|..|++.+++.++..+..++..|+++++++. ++....++++.+|+|.++...+..+
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA------------------------PLARRASLFRFFRRPLAWSLLALAL 218 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc------------------------chhhHHHHHHHHcCcCHHHHHHHHH
Confidence 9999999988877666555544433211100 0011235678899999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHH-HHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHH-HHH
Q 009978 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAP-GIA 412 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~ 412 (521)
+..........+.+.|++| .|+++++.+......++ ...++.++.|++.||+++++ .... +.... ...
T Consensus 219 l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~-------~l~~--~~~~~~~~~ 288 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR-------TFIL--GVGLAGSLA 288 (390)
T ss_pred HHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH-------HHHH--HHHHHHHHH
Confidence 8888788888899999998 79999999998887764 55677899999999999882 2222 22211 111
Q ss_pred HHHH--hc---cchhHHHHHHHHHHHHHHhhhhhhhHHH-HHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 413 LIGL--TA---AKSPVMASAWLTLAIGMKSFSHSGFLVN-LQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 413 ~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
+..+ .. ............+.....+...+..... .....+ +.+|+.+++.+...++|..++|.+.|.+.|..|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G 368 (390)
T TIGR02718 289 LLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG 368 (390)
T ss_pred HHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1111 11 1122222222222222334444444444 344455 688999999999999999999999999999987
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 009978 486 SFQGFLLLTSLLYFLSALF 504 (521)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~ 504 (521)
+...|...+++.+++.++
T Consensus 369 -~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 369 -YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred -cHHHHHHHHHHHHHHHHH
Confidence 888888887776665543
No 84
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=1.4e-28 Score=252.59 Aligned_cols=289 Identities=17% Similarity=0.189 Sum_probs=225.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhh
Q 009978 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (521)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~ 181 (521)
+.+++..+............++.+.++|+++..+.|++.+.+.++++++.++.|++.||+||||++.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44445666677777888999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhcc-------------------------------------------------ccchHHHHHHHHHHhhhhcchhhHHHH
Q 009978 182 PWAA-------------------------------------------------DTSLLALLAMRAVVGLAEGVALPAMNN 212 (521)
Q Consensus 182 ~~~~-------------------------------------------------~~~~~~l~~~r~l~G~g~~~~~~~~~~ 212 (521)
++.. ...+..++++|+++|+|.+...+...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 7651 002456789999999999999999999
Q ss_pred HHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc----------------------CchhHHHHHHHHHHHHHH
Q 009978 213 MVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA----------------------GIFGPFVIFGLSGFLWVL 270 (521)
Q Consensus 213 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~----------------------gw~~~f~~~~~~~~i~~i 270 (521)
++.|++|+++|+++++++..+..+|.++|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987643 277778888888777666
Q ss_pred HHHHhcCCCCCCCCCCchhHHH-HHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 271 VWLSATSSTPDRHPQISKYELE-YILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPI 349 (521)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (521)
..+++.++.|+...+.+.++.+ ...++..+..........++....++.+++||.++...+..++.....+++..|+|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555444444322111100000 000000000000000001112345678999999999999999999999999999999
Q ss_pred HHHHHhCCCcccchhHhHHHHH-HHHHHHHHHHHHHHHHHhc
Q 009978 350 YFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 350 ~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~ 390 (521)
|+++.+|+++.+++++.....+ +.+++.+++|++.||++.+
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999999999999999887776 5678999999999999855
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=2.9e-27 Score=229.76 Aligned_cols=320 Identities=13% Similarity=0.092 Sum_probs=230.2
Q ss_pred hhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-----cchHH-HHHHHHHHHHHHhhhhhcc-ccc
Q 009978 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKII-MAWGVALWSLATFLTPWAA-DTS 188 (521)
Q Consensus 116 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-----Grr~~-~~~~~~~~~~~~~l~~~~~-~~~ 188 (521)
...++..|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++.. ..+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999765 555555 99999999998 89886 5667777777766665552 135
Q ss_pred hHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC--------chhHHHH
Q 009978 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--------IFGPFVI 260 (521)
Q Consensus 189 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g--------w~~~f~~ 260 (521)
++.+....++.+++.+...++..+++.|++|+|+|+++.++...+.++|.++++.+++.+.+..+ ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 66677778888888888899999999999999999999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcch---HHHHHHHHHHHH
Q 009978 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP---TWSIIVANAMHS 337 (521)
Q Consensus 261 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~ 337 (521)
.++..++..+..++..||+++.++. ++++. ++..+.+++++++|. ++...+..++..
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~-~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASV-PKPLT-------------------QAVLKPIREFFQRKNMIQALLLLLLIVLYK 222 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCccccc-chhHH-------------------HHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 9987777555555445553322111 00000 001234567777775 777777777777
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchhHhHHHH-HHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHH
Q 009978 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPW-SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
........+.|.|+++ +|+++.+.+.+....+ ++.+++.++++++.||+++|+ ... .+.++.++....+
T Consensus 223 ~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~-------~l~--~~~~~~~~~~~~~ 292 (356)
T TIGR00901 223 LGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY-------ALL--LFGIVQALTNAGF 292 (356)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH-------HHH--HHHHHHHHHHHHH
Confidence 8888888999999998 8999999988877666 567889999999999999872 222 2222222222211
Q ss_pred hc---c--------chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHH
Q 009978 417 TA---A--------KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGT 467 (521)
Q Consensus 417 ~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ 467 (521)
.. . +..+......++.....+...+....+..+..| +++|+.+|+.++..+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 293 VWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 11 1 222333333334344445556666666666665 699999999887654
No 86
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=1.2e-25 Score=224.76 Aligned_cols=399 Identities=13% Similarity=0.116 Sum_probs=250.3
Q ss_pred HHHHHHHHHHHHhhhhhhhh-hhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH-hcchHHHHHHHHHHHHH
Q 009978 100 VVSMLALALALCNADRVVMS-VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLA 177 (521)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr-~Grr~~~~~~~~~~~~~ 177 (521)
.+..+++..+...+..+... ....++.+++|.+..+.+++.+.+.....+..+++|+++|| +||||+++++.+++.++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g 94 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIG 94 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHH
Confidence 34444555555555555444 44556678899999999999999998888999999999999 99999999999999999
Q ss_pred HhhhhhccccchHH-HHHHHHHHhhhhcchhhHHHHHHHhcCCch--hhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 178 TFLTPWAADTSLLA-LLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 178 ~~l~~~~~~~~~~~-l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
.++++++ .+... ++++|+++|+|.|...+...+++.|.+|++ +|+++++++..+.++|..+||.+++++.+++||
T Consensus 95 ~~~~~~~--~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 95 YFMTGMS--LLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred HHHHHHh--ccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 9999887 55444 558999999999999999999999999876 457899999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCC---CCCCchhHH-HHH------------HHhhccc-cccC------------
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSSTPDR---HPQISKYEL-EYI------------LREKQKP-LLMG------------ 305 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~---~~~~~~~~~-~~~------------~~~~~~~-~~~~------------ 305 (521)
|+.|++.++..++..+..... ++..++ ++..++.+. ... ....... ....
T Consensus 173 ~~~F~i~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (489)
T PRK10207 173 SVTYNLCGAGLIIALLVYFAC-RGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTI 251 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-chhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 999999765433333332222 211111 010000000 000 0000000 0000
Q ss_pred ---CCCCCCCCCchHHHHHhcchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcc----cchhHhHHHHHHHHHH
Q 009978 306 ---NKHKPATVIPPFRRLLSKMPTWSIIVA--NAMHSWGFFVILSWMPIYFNFVYHIDLR----QASWFSAVPWSVMAFT 376 (521)
Q Consensus 306 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~i~ 376 (521)
.++.+. .+.+|+|.+....+. ..+.+..+......++.+.++..+.+.. ....+.+...+..++.
T Consensus 252 ~f~~~~~~~------~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~ 325 (489)
T PRK10207 252 IFFREAFKL------DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVA 325 (489)
T ss_pred HHHHHHhcC------CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHH
Confidence 000000 145556654443322 4444455555557777777753332111 1233444455666677
Q ss_pred HHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHH-----HHhcc---chhH-HHHHHHHHHHHHHhhhhhhhHHHH
Q 009978 377 GYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI-----GLTAA---KSPV-MASAWLTLAIGMKSFSHSGFLVNL 447 (521)
Q Consensus 377 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 447 (521)
.++.+++.||+++|+.......+......+...+...+ ..... .+.+ .....++.+.+.....++......
T Consensus 326 ~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~ 405 (489)
T PRK10207 326 SPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIA 405 (489)
T ss_pred HHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 88889999999998654444434333222222222111 11111 1233 333334445555444445555555
Q ss_pred HhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhh---------cccchHHHHHHHHHHHHHHHHHHHH
Q 009978 448 QEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE---------LVGSFQGFLLLTSLLYFLSALFYII 507 (521)
Q Consensus 448 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (521)
...+++.+|.++|+.+....+|+.++..+.+.... ..+.+...|...++..+++.++++.
T Consensus 406 ~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 406 ALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 66666799999999999999999999888865531 1112566777766666655555444
No 87
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=8.1e-27 Score=233.39 Aligned_cols=336 Identities=16% Similarity=0.123 Sum_probs=238.2
Q ss_pred hhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH----hcchH-HHHHHHHHHHHHHhhhhhcccc----chH
Q 009978 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKI-IMAWGVALWSLATFLTPWAADT----SLL 190 (521)
Q Consensus 120 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr----~Grr~-~~~~~~~~~~~~~~l~~~~~~~----~~~ 190 (521)
...+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++++....+++.+++...+.. ...
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34566777899999999999999999999999999999998 67744 6777888888887777665211 145
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhcC-CchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh-------ccCchhHHHHHH
Q 009978 191 ALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIFG 262 (521)
Q Consensus 191 ~l~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gw~~~f~~~~ 262 (521)
.+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 6777888889988887888888999987 56899999999999999988887776655542 458999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHH
Q 009978 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (521)
Q Consensus 263 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 342 (521)
++.++..++.++..+|++++.+ .+++++.+..+.++.++++|.++...+..++.......
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSEIP--------------------KNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNI 240 (437)
T ss_pred HHHHHHHHHHHcCCEecCCCCC--------------------cccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 8887776666665555442211 00011122345677888999999888888887777776
Q ss_pred HHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhcc-ch
Q 009978 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA-KS 421 (521)
Q Consensus 343 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 421 (521)
...+.+.|.++..+ ++...+.+.....++.+++.++.+++.||+++|+ ....+..+..+....+... ++
T Consensus 241 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~---------~~~~~~~~~~~~~~~~~~~~~~ 310 (437)
T TIGR00792 241 KNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI---------LFAGGILLMVLGYLIFFFAGSN 310 (437)
T ss_pred HcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH---------HHHHHHHHHHHHHHHHHHcchh
Confidence 66666666665455 4556667777778889999999999999999872 2223333333322222222 23
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHHhhh--------ccchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIA--------PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
.+...+..++.....+...+...+...+.. ++.+|.++|+.+....+|..+++.+.|.+.+..|
T Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 311 LPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333333333333333333444555555543 2467999999999999999999999999998766
No 88
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=4e-26 Score=216.69 Aligned_cols=380 Identities=11% Similarity=0.066 Sum_probs=264.6
Q ss_pred hhhhhhhhhhhhhhhhhcCCcch-hhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHH
Q 009978 113 ADRVVMSVAIVPLSLAHGWSRSF-SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLA 191 (521)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~ 191 (521)
-.+...+.+.|.+.+++|+|+.+ .|.+.+++..+++++.++.|+++||+|.|+++.++.+.+++..++.+++ +++..
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa--~Sl~~ 117 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG--TSVWH 117 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHHHH
Confidence 34678888999999999999999 9999999999999999999999999999999999999999999999998 99999
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH--HHHHHH
Q 009978 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL--SGFLWV 269 (521)
Q Consensus 192 l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~--~~~i~~ 269 (521)
+.+.|++.|++.|... +...++..|+|+++|+++.++...+..+|.+++++++++ +..+|||+.+.+.-+ .+.+..
T Consensus 118 L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 118 MQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHH
Confidence 9999999999999988 999999999999999999999999999999999999999 556899986544322 222233
Q ss_pred HHHHHhcCCCCCCCCCCchhHHH-HHHHhhccccccCC--CC--CC-------CCCCchHHHHHhcchHHHHHHHHHHHH
Q 009978 270 LVWLSATSSTPDRHPQISKYELE-YILREKQKPLLMGN--KH--KP-------ATVIPPFRRLLSKMPTWSIIVANAMHS 337 (521)
Q Consensus 270 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~--~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 337 (521)
+++.++.|..++..-..++++.+ ....+.+....... .. .+ ......++...+||.++...+-..+..
T Consensus 196 ~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~ 275 (511)
T TIGR00806 196 VFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNS 275 (511)
T ss_pred HHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHh
Confidence 33334445333211000000000 00000000000000 00 00 011234556678899988888888888
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 009978 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
.+++.+.+|......+..+-++..-|..-++..+.++++.+..|++-.++.+. ..+.+.+..++.+..++.+.
T Consensus 276 ~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~ 348 (511)
T TIGR00806 276 AGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMS 348 (511)
T ss_pred hHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhh
Confidence 89998988888888775342233567777777788888888888885554333 22455566666666777778
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhHHH-HHhhhccchhhHHhHHHHHHHHHHHHHHHHH----HH---HhhcccchHH
Q 009978 418 AAKSPVMASAWLTLAIGMKSFSHSGFLVN-LQEIAPQYSGVLHGISNTAGTFAAILGTVGA----GF---FVELVGSFQG 489 (521)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~----g~---l~~~~g~~~~ 489 (521)
..++.|...+..++......+..+....- ...+..+..|-++|+.+++.-+-..+-..+. |. +.+.+--|..
T Consensus 349 ~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~ 428 (511)
T TIGR00806 349 QSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSV 428 (511)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhh
Confidence 88888888777777666665555544333 3344445679999998877766655544432 22 1111113555
Q ss_pred HHHHHHHHHHHHHH
Q 009978 490 FLLLTSLLYFLSAL 503 (521)
Q Consensus 490 ~~~~~~~~~~~~~~ 503 (521)
.|...+++.++..+
T Consensus 429 yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 429 YFLVLSIICFFGAG 442 (511)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666655555544
No 89
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.2e-26 Score=206.32 Aligned_cols=401 Identities=15% Similarity=0.104 Sum_probs=283.4
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHH
Q 009978 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (521)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~ 172 (521)
..+.+|..............+.....+.+.|...+.+|.+..+..++......+..+++..+|..+|++|||+.+.+..+
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 35667888888888888888877788888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc
Q 009978 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (521)
Q Consensus 173 ~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 252 (521)
..++...+.+.+ +|+..+++.|.+.|+|.|+ .|...++-.|..|..+|..-+-.. ..+.+|.+....++-.+..++
T Consensus 152 ~t~v~~~is~~s--pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 152 VTGVFGVISGAS--PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHHhhcCC--CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 9999999999999999999 899999999999999988776666 899999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCchhHHH----HHHHhhccc----------c----------ccCCC
Q 009978 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELE----YILREKQKP----------L----------LMGNK 307 (521)
Q Consensus 253 gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~----------~----------~~~~~ 307 (521)
||||.....+....+.+. ..+..+|+|+-.- ..++++.- ++.+....+ . +..+.
T Consensus 228 gwr~~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~ 306 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAAR-FLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS 306 (528)
T ss_pred hHHHHHHHHHhHHHHHHH-HHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh
Confidence 999988888865555444 4445677775321 11222111 111111100 0 00000
Q ss_pred CCCCCCCchHHHHHh---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--C-----------------CCcccchhH
Q 009978 308 HKPATVIPPFRRLLS---KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY--H-----------------IDLRQASWF 365 (521)
Q Consensus 308 ~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--g-----------------~~~~~~~~~ 365 (521)
...++.......++. ++..+.++...|...+.+++........++... + .+...--.=
T Consensus 307 ~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd 386 (528)
T KOG0253|consen 307 SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD 386 (528)
T ss_pred ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH
Confidence 111222333334332 123344445555555566655444444443311 0 010111112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHH
Q 009978 366 SAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLV 445 (521)
Q Consensus 366 ~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (521)
..+..+....|.++.++++||+||| ..++..+++.+++++.+...........+.+.+-.+........+.
T Consensus 387 llitslaefPGlLIt~~iverlGRK---------kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYv 457 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRK---------KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYV 457 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcch---------hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEE
Confidence 3345667788999999999999999 3456666777777776666655555566666667777777888899
Q ss_pred HHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 446 NLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 446 ~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
+..|++| +.|+++.|.+..+..+|+++.|.+. ...+.. ...+..+.+.+++++.+...+++.
T Consensus 458 YtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s--~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 458 YTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELS--TSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred ecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccc--eeehHHHHHHHHHHHHHHheeeee
Confidence 9999999 5999999999999999999999998 444432 334444445555555555555543
No 90
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=8.2e-26 Score=218.11 Aligned_cols=366 Identities=16% Similarity=0.117 Sum_probs=256.9
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhcc-ccchHHHHHHHHHHhhhhcchhhHHHHHH
Q 009978 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMV 214 (521)
Q Consensus 136 ~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i 214 (521)
.+.+.+++.+|.++|++..|+++||+|||..+.++.++..++.++..++. .++++.++++|++.|+..|.......-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46788899999999999999999999999999999888888777655542 27899999999999999999999999999
Q ss_pred HhcCCchhhHHHHHHHHhhhhhhhHHHHHHHH--HhhhccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC--CCchhH
Q 009978 215 ARWFPQTERARAVAIAMGGFTSGNAIGLVLSP--ILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP--QISKYE 290 (521)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~--~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~--~~~~~~ 290 (521)
.|..|++.||....+.+.+..+|.++|..++. .+.+...|++.+....+++++..+.. ...||+|+..- +.+++|
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALL-PFLPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHH-hcCCCCcchHHHHcCCHHH
Confidence 99999999999999999999999999977663 33345569999988888877765544 45688886531 222333
Q ss_pred HHHHHHhhcccc-----------ccCCCCCCCCCCchHHHHHhcchHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Q 009978 291 LEYILREKQKPL-----------LMGNKHKPATVIPPFRRLLSKMPTWSIIV-----ANAMHSWGFFVILSWMPIYFNFV 354 (521)
Q Consensus 291 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~ 354 (521)
+++..+.-+... +.++++..+....++++++++|....-.. .......+.+....|...++++
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~- 299 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT- 299 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-
Confidence 332222111110 00111122235567888998876554322 2222333556677777788877
Q ss_pred hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc----cc-h-hHH---H
Q 009978 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA----AK-S-PVM---A 425 (521)
Q Consensus 355 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~-~~~---~ 425 (521)
.|++..++.+.....++...+.++++.++.||.|||. ++..+..++.+..+.+.. .+ . .|. .
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRp---------Lll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~ 370 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRP---------LLLISLSLMAVALLLMSIALFLSNSFGSWLSYLC 370 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcH---------HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 7999999999999999999999999999999999993 333333333332222211 11 1 122 2
Q ss_pred HHHHHHHHHHHhhh-hhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH-
Q 009978 426 SAWLTLAIGMKSFS-HSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA- 502 (521)
Q Consensus 426 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~- 502 (521)
++..++.......+ .|..+.+..|+.| +.|+.+.++...+.++..++-......+.+..|. ..|+.+.+.+++..
T Consensus 371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i 448 (485)
T KOG0569|consen 371 IAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLI 448 (485)
T ss_pred HHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHH
Confidence 23333333333444 4455677788887 5999999999999999999999999999999984 45555555544444
Q ss_pred HHHHHhccCccc
Q 009978 503 LFYIIFSTGERV 514 (521)
Q Consensus 503 ~~~~~~~~~~~~ 514 (521)
.++..++++|.+
T Consensus 449 ~~~~~lPETkgr 460 (485)
T KOG0569|consen 449 YLYRYLPETKGR 460 (485)
T ss_pred HHHHhCcccCCC
Confidence 444455555544
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=1.7e-26 Score=208.54 Aligned_cols=358 Identities=15% Similarity=0.086 Sum_probs=236.5
Q ss_pred hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhc
Q 009978 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (521)
Q Consensus 125 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~ 204 (521)
..+..+.+..-.|.+.+.+.+...+.++.+|.++||+|||++++++.+..+++..+.+++ .|+..+++.|++.|+..|
T Consensus 59 ~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S--~~F~afv~aR~l~Gi~kg 136 (451)
T KOG2615|consen 59 IGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS--RNFAAFVLARFLGGIFKG 136 (451)
T ss_pred hCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhhhhccC
Confidence 333344456677999999999999999999999999999999999999999999999999 999777777999999987
Q ss_pred chhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh---ccCchhHHHH----HHHHHHHHHHHHHHhcC
Q 009978 205 VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS---QAGIFGPFVI----FGLSGFLWVLVWLSATS 277 (521)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~gw~~~f~~----~~~~~~i~~i~~~~~~~ 277 (521)
. .....++++|.+++|+|+++++.+...+++|.++||.+|+++.. ..| +++|.. ..+....-.....++.|
T Consensus 137 n-l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lp 214 (451)
T KOG2615|consen 137 N-LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLP 214 (451)
T ss_pred c-hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6 66789999999999999999999999999999999999999987 222 222222 22222221222333445
Q ss_pred CCCCCCCCCc-hhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHH-------HHHHHHHHHHHHHHHHHHHHHH
Q 009978 278 STPDRHPQIS-KYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW-------SIIVANAMHSWGFFVILSWMPI 349 (521)
Q Consensus 278 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~ 349 (521)
|+-+.+++.+ ..+..+..+...+ ..+.....--..+||+... .+.+..+++...+..+..+.+.
T Consensus 215 ETL~~rk~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~ 286 (451)
T KOG2615|consen 215 ETLPLRKRNDEHSTLQEAADDRLA--------LLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLF 286 (451)
T ss_pred ccccchhhcccccchhhhhhhhhh--------hcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 5432222110 0001110000000 0000000011233443322 2333444444444445555555
Q ss_pred HHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Q 009978 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWL 429 (521)
Q Consensus 350 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (521)
+..+.+|+++.+.|-+.+..++.+.+.+.......+|.+.. .+..+......+.-.++.+.....+.......
T Consensus 287 l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s 359 (451)
T KOG2615|consen 287 LTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGS 359 (451)
T ss_pred hhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHH
Confidence 54566899999999999888888877776666666654411 11233344444444455555555555555555
Q ss_pred HHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 009978 430 TLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (521)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (521)
.+-.+......+.....+....| ++||+++|+..+.+.++.++||.+.|.+..+.-.-+..+...+.+.+..
T Consensus 360 ~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 360 TLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 55556666666777777777777 5999999999999999999999999999887543445555555555444
No 92
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.4e-25 Score=227.42 Aligned_cols=403 Identities=17% Similarity=0.115 Sum_probs=263.7
Q ss_pred HHHHHHHHHHHHhhh--hhhhhhhhhhhhhhh-----cCCc--chhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHH
Q 009978 100 VVSMLALALALCNAD--RVVMSVAIVPLSLAH-----GWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (521)
Q Consensus 100 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~s~--~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~ 170 (521)
......+..+..+.+ ....+.....+.++. ..+. .+.+++.+...++..+++++.|+++|++|||+.++++
T Consensus 46 ~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~ 125 (513)
T KOG0254|consen 46 LALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLA 125 (513)
T ss_pred HHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 333444444444443 345555566655532 1222 3458999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh
Q 009978 171 VALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (521)
Q Consensus 171 ~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 250 (521)
.+++.++.++++++ +|+++++++|+++|+|.|........+++|..|++.||...+..+....+|..++..++....+
T Consensus 126 ~~~~~iG~ii~~~a--~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 126 VVLFLIGAIIIALA--PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred HHHHHHHHHHHHHh--hhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999 9999999999999999999999999999999999999999999999999999999665555533
Q ss_pred c-cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CchhHHHHHHHhhcc--ccccC-----------CCCCCCCCCc
Q 009978 251 Q-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEYILREKQK--PLLMG-----------NKHKPATVIP 315 (521)
Q Consensus 251 ~-~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~-----------~~~~~~~~~~ 315 (521)
. ++||..+.+..+.+++..+. .+..||+|+..-+ .+.++.+........ ..+.. .+........
T Consensus 204 ~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (513)
T KOG0254|consen 204 VYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKA 282 (513)
T ss_pred CCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccc
Confidence 2 48999999999988888777 7777888764322 222222222222111 00000 0000000111
Q ss_pred hHHHHHh----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009978 316 PFRRLLS----KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRG 391 (521)
Q Consensus 316 ~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~ 391 (521)
.++++++ ++.++...+..+....+.+.+..|.+.+++. .|.+... .....+.++...++..+..++.||+|||
T Consensus 283 ~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr- 359 (513)
T KOG0254|consen 283 SWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR- 359 (513)
T ss_pred cHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-
Confidence 2233332 2334455566666666677778888888877 5766443 4555666777788888889999999998
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhcc------------chhHHHHHHHHHHHHH-HhhhhhhhHHHHHhhhc-cchhh
Q 009978 392 TSVTLTRKILQSIGFIAPGIALIGLTAA------------KSPVMASAWLTLAIGM-KSFSHSGFLVNLQEIAP-QYSGV 457 (521)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~ 457 (521)
.++..+...+.++...+... ...+..+...++.... .....+..+.+..|..| +.|+.
T Consensus 360 --------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~ 431 (513)
T KOG0254|consen 360 --------KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSK 431 (513)
T ss_pred --------HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhh
Confidence 33334443333333322211 1122233333333333 23333445567788888 69999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHH-HHHHHHHHHHH-HHHHHhccCcccccc
Q 009978 458 LHGISNTAGTFAAILGTVGAGFFVELVGSFQGFL-LLTSLLYFLSA-LFYIIFSTGERVNFD 517 (521)
Q Consensus 458 ~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 517 (521)
+.++...+.++...+-....-.+.+..+ ....| .+.+++.+... ..+...++.+.+..+
T Consensus 432 ~~s~~~~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sle 492 (513)
T KOG0254|consen 432 GASLAVAVNWLWNFLISFFFPFITEALG-IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLE 492 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHHHHHHheEEcccCCCCcHH
Confidence 9999999999888877777666666543 23333 33344333333 344455555554443
No 93
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=6.1e-24 Score=212.05 Aligned_cols=409 Identities=12% Similarity=0.018 Sum_probs=280.7
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH
Q 009978 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (521)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~ 173 (521)
..++|..+.......... ...+.++...+.+.+++|+|..+++++.++. .....++++.|++.||+|+|+++.++.++
T Consensus 23 e~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 345566555544444433 3445777888999999999999999998874 34456788899999999999999999999
Q ss_pred HHHHHhhhhhccc----cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhh
Q 009978 174 WSLATFLTPWAAD----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (521)
Q Consensus 174 ~~~~~~l~~~~~~----~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 249 (521)
++++.++++++.. ++++.+++.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++.+.+...+.
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888521 479999999999999999989999999999996 78999999999999999986444444433
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-----CCchhHHHHH------------------------------
Q 009978 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-----QISKYELEYI------------------------------ 294 (521)
Q Consensus 250 ~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~-----~~~~~~~~~~------------------------------ 294 (521)
. .+|+..|++.+++.++..++.+.+.++.|.... ..+++|....
T Consensus 180 ~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~y 258 (591)
T PTZ00207 180 S-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVF 258 (591)
T ss_pred H-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHH
Confidence 3 368899999988888877776666655543211 1112221100
Q ss_pred ------HHh----------------h----------------cccccc-C-----------------CC--------C-C
Q 009978 295 ------LRE----------------K----------------QKPLLM-G-----------------NK--------H-K 309 (521)
Q Consensus 295 ------~~~----------------~----------------~~~~~~-~-----------------~~--------~-~ 309 (521)
.+. . +...+. + .+ + .
T Consensus 259 l~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (591)
T PTZ00207 259 LPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYI 338 (591)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCC
Confidence 000 0 000000 0 00 0 0
Q ss_pred CCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--chhHhHHHHHHHHHHHHHHHHHHHHH
Q 009978 310 PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ--ASWFSAVPWSVMAFTGYLGGLLSDML 387 (521)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~i~~~~~g~l~dr~ 387 (521)
......++++.+++..+|++.+..++.......+...+.++.+..-|.+... ...+.++.++++.+|++..|.+....
T Consensus 339 ~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~ 418 (591)
T PTZ00207 339 APQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS 418 (591)
T ss_pred CCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH
Confidence 0111237888899999999999999998888888888888888832763333 33377889999999999999998554
Q ss_pred HhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHH
Q 009978 388 IQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGT 467 (521)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 467 (521)
.+|+...+..|...+.+..+ +.+..+.+........+.+..++.+...+..++.......|++.|+.|+-+.+.....-
T Consensus 419 ~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~p 497 (591)
T PTZ00207 419 QKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSV 497 (591)
T ss_pred HhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHH
Confidence 44431111122233333333 33322222222221233444445555566777788888888888999999998888888
Q ss_pred HHHHHH-HHHHHHHhhccc----c--------hHHHHHHHHHHHHHHHHHHHH
Q 009978 468 FAAILG-TVGAGFFVELVG----S--------FQGFLLLTSLLYFLSALFYII 507 (521)
Q Consensus 468 ~g~~~~-~~~~g~l~~~~g----~--------~~~~~~~~~~~~~~~~~~~~~ 507 (521)
+|..+- -.+.|.++|.-. + +...|++.+++++++.+....
T Consensus 498 igs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 498 LSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 888877 568888887421 1 567888888888877776544
No 94
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=1.8e-23 Score=202.46 Aligned_cols=373 Identities=14% Similarity=0.141 Sum_probs=265.2
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhc-chHHHHHHHHHHHHHHhhhhh
Q 009978 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-GKIIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~G-rr~~~~~~~~~~~~~~~l~~~ 183 (521)
+..+++.++....+.+..+.+.++.|.|..|+|.+.++..+...++++++|.++||++ +||.+.+..++.++.......
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666778888899999999999999999999999999999999999999986 577777777777766666666
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHH-HHHhhhccCc---hhHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL-SPILMSQAGI---FGPFV 259 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l-~~~l~~~~gw---~~~f~ 259 (521)
. ++++.+++..++..+......|...++..+... +++.-+|-.....++|.+++... ++.+....++ ...++
T Consensus 88 ~--~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 88 S--SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred h--ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 6 788888888888888888889999999988875 44566777777788888777554 2333333232 33455
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHH
Q 009978 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (521)
Q Consensus 260 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 339 (521)
+.++..++.....+ ..|+.|.++. .++..++....+..+++|+|+++.+.+..++....
T Consensus 164 i~~~~~~ll~~~~l-~lp~~~~~~~--------------------~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~ 222 (400)
T PF03825_consen 164 IAAILSLLLAGFAL-FLPKTPPKRS--------------------AKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGIS 222 (400)
T ss_pred HHHHHHHHHHHHHH-hCCCCccccc--------------------cCCCcccccchHHHHHhcCccHHHHHHHHHHHHHH
Confidence 55555444333333 3455442211 11111122223445799999999999999999889
Q ss_pred HHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 009978 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (521)
......+.+.|+++.-|.+....+...++..++.++.-...+++.+|++.+ .++.++.+..++-...+...
T Consensus 223 ~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~---------~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 223 HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK---------WLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHh
Confidence 999999999999994337777788888888888888888999999999887 45566666666666555554
Q ss_pred -chhHHHHHHHH----HHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHH-HHHHHHHHHHHHHHhhcccc-----h
Q 009978 420 -KSPVMASAWLT----LAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAG-TFAAILGTVGAGFFVELVGS-----F 487 (521)
Q Consensus 420 -~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~-~~g~~~~~~~~g~l~~~~g~-----~ 487 (521)
++.+....... +.+...+........+.++..| +.|++++++++... .+|..+|..++|+++|+.|. +
T Consensus 294 ~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~ 373 (400)
T PF03825_consen 294 SDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDW 373 (400)
T ss_pred cCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhH
Confidence 33333333332 2444445555666667777666 68999999988875 59999999999999998872 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Q 009978 488 QGFLLLTSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~ 511 (521)
...+.+.+++.++..++++++.|+
T Consensus 374 ~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 374 SAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC
Confidence 345555555555555555554433
No 95
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=8.4e-24 Score=209.51 Aligned_cols=365 Identities=16% Similarity=0.113 Sum_probs=245.0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~ 183 (521)
+++.....++........++.+..|+|-+ ....|+.+.+.++..++.++.|+++|.+|||..++.+.++..+|.++++.
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 34444444555556677788999999865 67789999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
+ +|...++.+..+.|+|.|... .....++|..|.|.|....++.....-.....++.++..+....+|||.|++.++
T Consensus 128 A--~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 128 A--QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred C--CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 9 999999999999999977655 4566699999999998888877766666666788888777777799999999988
Q ss_pred HHHHHHHHHHHhcCCCCCC--CCC-Cch-hHHHHHHH----------------h---hccccccCC--------------
Q 009978 264 SGFLWVLVWLSATSSTPDR--HPQ-ISK-YELEYILR----------------E---KQKPLLMGN-------------- 306 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~--~~~-~~~-~~~~~~~~----------------~---~~~~~~~~~-------------- 306 (521)
...+.+++.+++..+++++ +.+ ..+ ++.++..- - .......++
T Consensus 205 ~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~L 284 (599)
T PF06609_consen 205 WSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLL 284 (599)
T ss_pred HHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHH
Confidence 7776655444333222211 111 111 11111000 0 000000000
Q ss_pred --------CCCCCCCCchHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc---cchhHhHHHHHHHH
Q 009978 307 --------KHKPATVIPPFRRLLSK-MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLR---QASWFSAVPWSVMA 374 (521)
Q Consensus 307 --------~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~ 374 (521)
....+++.-+. +++|+ |.+...+++.++....++....+.|......++-++. ..++.....+++..
T Consensus 285 v~F~~wE~~~~~~~Pl~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~ 363 (599)
T PF06609_consen 285 VAFVVWEWFGAPKDPLFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSC 363 (599)
T ss_pred HHHHHhhhhccCCCCcCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHH
Confidence 01112223333 67777 4566666777777777888888889888877776653 56777788888888
Q ss_pred HHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHH--HHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHH-hhh
Q 009978 375 FTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPG--IALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQ-EIA 451 (521)
Q Consensus 375 i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 451 (521)
++.++.+.+..++++.| ..+.++..... ++.+.....++....+...++.....+..........+ ..+
T Consensus 364 ~g~~i~g~l~~~ir~~K--------w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p 435 (599)
T PF06609_consen 364 AGAVILGLLFSKIRHIK--------WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVP 435 (599)
T ss_pred HHHHHHHHHHHHccchh--------HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeC
Confidence 99999999998876552 23223333222 23333333333333333333333332332222333333 344
Q ss_pred ccchhhHHhHHHHHHHHHHHHHHHHHHHHh
Q 009978 452 PQYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (521)
Q Consensus 452 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 481 (521)
+++-|++.|+..+++.+|+.+|..+...+.
T Consensus 436 ~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 436 DEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 479999999999999999999988876655
No 96
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.5e-26 Score=213.89 Aligned_cols=414 Identities=13% Similarity=0.154 Sum_probs=288.3
Q ss_pred cccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-c-------CCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcc
Q 009978 92 FITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAH-G-------WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG 163 (521)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Gr 163 (521)
..++++...+.+..++.+.+.++...++...+.+...+ + .++...+.+..+..+|.++|++++|++.||+||
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34566778888889999999999999999888876654 2 455667889999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhccc-----cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhh
Q 009978 164 KIIMAWGVALWSLATFLTPWAAD-----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGN 238 (521)
Q Consensus 164 r~~~~~~~~~~~~~~~l~~~~~~-----~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 238 (521)
|+++...++++.++++++++... .-.+++...|++.|+|.|+-+|...+..+|...+++||...+.+.+..++|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 99999999999999988777632 1256788999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhhcc---------------CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC--CchhHHHHHHHh-hcc
Q 009978 239 AIGLVLSPILMSQA---------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ--ISKYELEYILRE-KQK 300 (521)
Q Consensus 239 ~~g~~l~~~l~~~~---------------gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~ 300 (521)
+.|.+++-.+..-+ =||..+.+.++.+++.... ....||+++-... .+.+......++ ...
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~-Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~ 272 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF-RLKMPETARYTALVSKKLKQAAGDMKKVLSV 272 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hhcCCcchhHHHHhhcCHhhhhhcccccccc
Confidence 88888776664311 2898887777776654433 3334554432210 000000000000 000
Q ss_pred ccccC-----CCCCCCCCCchHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh--------
Q 009978 301 PLLMG-----NKHKPATVIPPFRRLLSK---MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW-------- 364 (521)
Q Consensus 301 ~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------- 364 (521)
....+ ..+.+++....+...+.. +.++..+..+|+.-.+++....+...++++ .|+.+.....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~ 351 (538)
T KOG0252|consen 273 DIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAE 351 (538)
T ss_pred ccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHH
Confidence 00000 001111112223233322 345566777777778888888888888887 5776655443
Q ss_pred HhHHHHHHH-HHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHhhh
Q 009978 365 FSAVPWSVM-AFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS----PVMASAWLTLAIGMKSFS 439 (521)
Q Consensus 365 ~~~~~~~~~-~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 439 (521)
...+...++ +.|..+...++|++||+ .+...++.+..+..+.+....+ .....+...+..++..++
T Consensus 352 ~~~iia~~~~vPGyw~tv~~id~iGRk---------~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG 422 (538)
T KOG0252|consen 352 GNLIIAVCSTVPGYWFTVYFIDIIGRK---------YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG 422 (538)
T ss_pred HHHHHHHHccCCceeEEEEEeehhhhH---------HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC
Confidence 111222222 22445566789999999 5666777777776666654433 122333344444555555
Q ss_pred hhh-hHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh-----cccchHHHHHHHHHHHHHHHHHHHHhccCc
Q 009978 440 HSG-FLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE-----LVGSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (521)
Q Consensus 440 ~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (521)
+.. ...+..|.+| +.|++..|+..+.+..|++++....+++.+ ..| ....+++.+.+.+++.+..+++++.+
T Consensus 423 Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 423 PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcccc-chHHHHHHHHHHHHhHheeEEeeccc
Confidence 443 3566778888 599999999999999999999999999999 666 88999999999999999988888766
Q ss_pred ccccc
Q 009978 513 RVNFD 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+++.+
T Consensus 502 ~~~le 506 (538)
T KOG0252|consen 502 GKSLE 506 (538)
T ss_pred ccCHH
Confidence 65543
No 97
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.94 E-value=3e-23 Score=196.61 Aligned_cols=379 Identities=17% Similarity=0.114 Sum_probs=259.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH--HHHH-h
Q 009978 104 LALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW--SLAT-F 179 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~--~~~~-~ 179 (521)
..+.++..++..+...+..+...++ .|+|.+++|.+.++..+...+.+|+.|.+.||+|.||-++....+. ..+. +
T Consensus 12 ~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff 91 (412)
T PF01306_consen 12 LSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFF 91 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 3445555556666777777777765 8999999999999999999999999999999999777655433222 2222 2
Q ss_pred hhhhcc--ccch-HHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchh
Q 009978 180 LTPWAA--DTSL-LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (521)
Q Consensus 180 l~~~~~--~~~~-~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~ 256 (521)
...+.+ ..|. ...+++-+..|+......|+..+++.++. ++.+.-.|-.....++|.+++..++|.+.+ .+-+.
T Consensus 92 ~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~ 168 (412)
T PF01306_consen 92 IYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNI 168 (412)
T ss_dssp HHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccH
Confidence 222221 1232 23344445556666666788888887775 556677888889999999999999999987 35677
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHH
Q 009978 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (521)
Q Consensus 257 ~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 336 (521)
.|++....+++..++.+...|+.+++.+..+. ...++++...++..+++|+|++|.+.+.....
T Consensus 169 ~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~ 232 (412)
T PF01306_consen 169 IFWIASAAAIILLLLLLLLKPDVPPQAEVADA----------------LGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGV 232 (412)
T ss_dssp HHHHHHHHHHHHHHHHHSS---SSSSS-SSTT----------------SSS------HHHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc----------------cccCCCCCcHHHHHHHhcchhHHHHHHHHHHH
Confidence 88877766666555555554444332211100 11112222345567899999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHh---CCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHH
Q 009978 337 SWGFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
...+..+....+.|....+ +.+....|.+.++..+..++...+.+++.+|+|.| ..+.++..+..+-.
T Consensus 233 ~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k---------~~Lllag~i~~iRi 303 (412)
T PF01306_consen 233 AAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK---------NLLLLAGVIMAIRI 303 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH---------hHHHHHHHHHHHHH
Confidence 8888888888888887633 23445688888898899999999999999999999 44555666677777
Q ss_pred HHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHH-HHHHHHHHHHHHHHHHHHhhcccchHHHH
Q 009978 414 IGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGIS-NTAGTFAAILGTVGAGFFVELVGSFQGFL 491 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~-~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 491 (521)
......++++.....=.+.............-+..+..| +..++.+.+. +...++|.++.+.+.|.++|+.| ++.+|
T Consensus 304 ~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~ty 382 (412)
T PF01306_consen 304 IGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTY 382 (412)
T ss_dssp HHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHH
Confidence 777778888877777677776666666666666777766 5678888885 57778999999999999999998 88888
Q ss_pred HHHHHHHHHHHHHHHHhccC
Q 009978 492 LLTSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~ 511 (521)
++.+.+.+...++..+..++
T Consensus 383 limg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 383 LIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHheeeecC
Confidence 88887776666555544433
No 98
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=6.3e-26 Score=196.09 Aligned_cols=391 Identities=15% Similarity=0.179 Sum_probs=266.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH-hcchHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVAL 173 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr-~Grr~~~~~~~~~ 173 (521)
.+|...+..+++..+-+++.....+....++.++.+++.++..++.+.|.....+.++++|++.|| +|.|..-++-+..
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 445666777777778888888888888888999999999999999999999999999999999998 5887766665666
Q ss_pred HHHHHhhhhhcc-ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc
Q 009978 174 WSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (521)
Q Consensus 174 ~~~~~~l~~~~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 252 (521)
..++.++++.-. .+.+|.+..+|++.|+|.-...++.++++.-||..|+.+.++|+......+|..+--.+.+++.+..
T Consensus 120 v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 666666554321 2789999999999999988888899999999999999999999999999999988888888877654
Q ss_pred Cc------hh---HHHHHHHHHHH-HHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHh
Q 009978 253 GI------FG---PFVIFGLSGFL-WVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLS 322 (521)
Q Consensus 253 gw------~~---~f~~~~~~~~i-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (521)
+- +. ..+..+..... ..+..... ... ++..+.+....+. ...+.++..+.+. -
T Consensus 200 ~~~~~~~ghT~LG~~l~~~~~tc~~slical~l--------g~~-D~rAerilh~e~g------~~Ge~pkLtdv~~--f 262 (459)
T KOG4686|consen 200 GRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL--------GLS-DDRAERILHLEEG------FLGEEPKLTDVNT--F 262 (459)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh--------hhh-hhHHHHHHhhhcC------cccCCcccccccc--c
Confidence 31 11 11111111111 11111110 000 0011111110000 0001111111111 1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHH
Q 009978 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQ 402 (521)
Q Consensus 323 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~ 402 (521)
.|.+|.+.++.++++.+.+-+....|.++++++|+|+..++.+.+.....+.+.+++.|.++||+|++-+ ++
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-------wv- 334 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-------WV- 334 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-------hH-
Confidence 5789999999999999999999999999999999999999999999999999999999999999999821 11
Q ss_pred HHHHHHHHHH--HHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc-chhhHHhHHHHHHHHHHHHHHHHHHH
Q 009978 403 SIGFIAPGIA--LIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGISNTAGTFAAILGTVGAGF 479 (521)
Q Consensus 403 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~~~~~~g~ 479 (521)
..+.+..... .+.+.. -+++... .+++. .........+..+..+.|| +.|+++|.++.+.++|-.+.|.+.|.
T Consensus 335 ~~a~~~tl~~H~~l~Ft~-lsPy~~m--~~lGL-sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFTF-LSPYTSM--TFLGL-SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred HHHHHHHHHHhhhHHhhh-ccHHHHH--HHHhh-hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 1111111111 112221 2233221 22222 2222223344455566665 88999999999999999999999999
Q ss_pred Hhhcccch---HHHHHHHHHHHHHHHHHHHHhccCccc
Q 009978 480 FVELVGSF---QGFLLLTSLLYFLSALFYIIFSTGERV 514 (521)
Q Consensus 480 l~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (521)
+.|.-|+| ...|+..+.+.+....+.+.+.++++-
T Consensus 411 i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~g 448 (459)
T KOG4686|consen 411 IADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQSG 448 (459)
T ss_pred eecCCCchhhHHHHHHHHHHHHHHHHHHHhheeccccC
Confidence 99988755 345556666666666666666555443
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=5.4e-23 Score=206.95 Aligned_cols=394 Identities=14% Similarity=0.123 Sum_probs=228.2
Q ss_pred HHHHHHHHHhhhhhhhhhhh-hhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH-hcchHHHHHHHHHHHHHHhh
Q 009978 103 MLALALALCNADRVVMSVAI-VPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr-~Grr~~~~~~~~~~~~~~~l 180 (521)
.+++..+...+..+.+...+ .++.+++|++..+.+++.+.+........+++|+++|| +|||+++.++.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 34444444555544454444 44568899999999999888877777777899999999 59999999999999999888
Q ss_pred hhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchh--hHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHH
Q 009978 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE--RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (521)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f 258 (521)
++++. ++.+.++++|+++|+|.|...+...+++.|++|+++ |+.++++++.+.++|..+||.+++++.+.+|||+.|
T Consensus 105 ~~~~~-~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F 183 (500)
T PRK09584 105 VAWSG-HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAF 183 (500)
T ss_pred HHHhc-ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 87761 245667788999999999988999999999997543 456889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---HHhcCCCCCCCC--CCchhHHHHHH-----HhhccccccCCCCCCCC---------------C
Q 009978 259 VIFGLSGFLWVLVW---LSATSSTPDRHP--QISKYELEYIL-----REKQKPLLMGNKHKPAT---------------V 313 (521)
Q Consensus 259 ~~~~~~~~i~~i~~---~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---------------~ 313 (521)
++.++..++..+.. ....++.+++.. ..+........ -...........+.... .
T Consensus 184 ~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (500)
T PRK09584 184 ALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKE 263 (500)
T ss_pred HHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99876544433322 222233211111 01111000000 00000000000000000 0
Q ss_pred CchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCCcc------cchhHhHHHHHHHHHHHHHHHHHHH
Q 009978 314 IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNF--VYHIDLR------QASWFSAVPWSVMAFTGYLGGLLSD 385 (521)
Q Consensus 314 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~------~~~~~~~~~~~~~~i~~~~~g~l~d 385 (521)
....++.-++ +.+..++ .++....++......+.++.. ..+.+.. ..+++.++..+..++..++..++.+
T Consensus 264 ~~~~~~~~~~-~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~ 341 (500)
T PRK09584 264 AFAMKGAARR-KMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYN 341 (500)
T ss_pred HhhcCHHHHH-HHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 0000011112 2222222 223334444555555555443 1112211 2455666677777777777777777
Q ss_pred HHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccc----------hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cc
Q 009978 386 MLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK----------SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QY 454 (521)
Q Consensus 386 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 454 (521)
|.++|.. .. ....+++++.+++.+.+.... ..+.....++.+.+.. ...+....+..+..| +.
T Consensus 342 ~l~~r~~---~~--~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~-~~~p~g~s~~~~~aP~~~ 415 (500)
T PRK09584 342 KMGDRLP---MP--HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL-MISGLGLAMVAQLVPQRL 415 (500)
T ss_pred HhCcCCC---cH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhCcHHH
Confidence 7765521 12 233444444444444432221 1233333334444444 444555555555555 69
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHhh---------cccchHHHHHHHHHHHHHHHHHH
Q 009978 455 SGVLHGISNTAGTFAAILGTVGAGFFVE---------LVGSFQGFLLLTSLLYFLSALFY 505 (521)
Q Consensus 455 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~ 505 (521)
||+++|++.....+|..++..+.+.... ..+++...|...++..++..+++
T Consensus 416 rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 416 MGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999998877777777776666653221 11236677777776655444333
No 100
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=1.3e-23 Score=214.52 Aligned_cols=367 Identities=16% Similarity=0.097 Sum_probs=247.7
Q ss_pred hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcc
Q 009978 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (521)
Q Consensus 126 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~ 205 (521)
.+.+..+.....+..+++.+|..+|++++|+++||+|||++++.+.++..++.++.+++ +|++.+++.|++.|++.++
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a--~~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA--PNYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhccc
Confidence 35567788888999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 009978 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ 285 (521)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~ 285 (521)
.......++.|++++++|+.+..+ ......+..++++.++++.. +||+.+++..++.++.+++ +++.+|+|+....
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999999 77777888888888888877 8999999999988876665 5566677764322
Q ss_pred C-chhHHHHHHHhhcc------cc----cc----C-CCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 286 I-SKYELEYILREKQK------PL----LM----G-NKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPI 349 (521)
Q Consensus 286 ~-~~~~~~~~~~~~~~------~~----~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (521)
. +.++.....++..+ .. .. . .......+...+..+++.|++....+...+.++.......-++.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 2 12222222222110 00 00 0 00011122234667788776555555444444333333332333
Q ss_pred HHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccc--hh-HHHH
Q 009978 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK--SP-VMAS 426 (521)
Q Consensus 350 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 426 (521)
.... +|.+. .......+.....+....+...|+.||| .....+.....++++...... .. +...
T Consensus 344 ~~~~-lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (521)
T KOG0255|consen 344 NVSG-LGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRR---------PPLFLSLFLAGIGLLLFGWLPDDLGGWLHW 410 (521)
T ss_pred hhhh-cCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 3322 34332 2333344445666667778899999877 344444444444444443332 22 2344
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHhhhcc-chhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH-HHHH
Q 009978 427 AWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFL-SALF 504 (521)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~-~~~~ 504 (521)
....++.+.........+.+..|..|. .|+.+.+.......++.+++|.+.-...... ....+...+....+ +.+.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~ 488 (521)
T KOG0255|consen 411 ILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMF--PLLGLILFGWLALLLGLLS 488 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccchHHHHHHHHHHHHHHH
Confidence 555556666666666668888899985 9999999999999999999998875554422 22222223333333 3344
Q ss_pred HHHhccCcc
Q 009978 505 YIIFSTGER 513 (521)
Q Consensus 505 ~~~~~~~~~ 513 (521)
..++++.+.
T Consensus 489 ~~~lpet~~ 497 (521)
T KOG0255|consen 489 LLLLPETKG 497 (521)
T ss_pred HhcCcccCC
Confidence 355555443
No 101
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.93 E-value=4.7e-22 Score=194.73 Aligned_cols=379 Identities=16% Similarity=0.113 Sum_probs=247.2
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHh----HhcchHHHHHH-HHHHHHHHhhhh
Q 009978 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGGKIIMAWG-VALWSLATFLTP 182 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~d----r~Grr~~~~~~-~~~~~~~~~l~~ 182 (521)
.+-..+.+....+..+++.+++|.+..+.+++..+..+...+.+++.|+++| |+||||.++++ .+...++.++++
T Consensus 13 ~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~ 92 (477)
T TIGR01301 13 AAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG 92 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3333455556667777788999999999999999999999999999999999 59999988774 666666666666
Q ss_pred hccccchH-----------------HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhh--HHHHHHHHhhhhhhhHHHHH
Q 009978 183 WAADTSLL-----------------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTER--ARAVAIAMGGFTSGNAIGLV 243 (521)
Q Consensus 183 ~~~~~~~~-----------------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~ 243 (521)
++ +++. .++++-.+..++.....+...++++|.+|+++| +.++++.+.+.++|.++|+.
T Consensus 93 ~~--~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~ 170 (477)
T TIGR01301 93 FA--ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYA 170 (477)
T ss_pred hC--chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 4432 233333344557777888899999999998765 68999999999999999999
Q ss_pred HHHHh--hhcc-------------CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCC
Q 009978 244 LSPIL--MSQA-------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKH 308 (521)
Q Consensus 244 l~~~l--~~~~-------------gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (521)
++++. .+.+ +.|..|++.+++.++..++..+..+|.|...++..+++ + .++.
T Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-~------------~~~~ 237 (477)
T TIGR01301 171 AGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-E------------AAPP 237 (477)
T ss_pred HHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-h------------cccc
Confidence 99875 2221 46888999888888877777777777654222111000 0 0000
Q ss_pred CCCCCCchHHHHHh----c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCccc----------chhHhHHHHHH
Q 009978 309 KPATVIPPFRRLLS----K-MPTWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQ----------ASWFSAVPWSV 372 (521)
Q Consensus 309 ~~~~~~~~~~~~~~----~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~----------~~~~~~~~~~~ 372 (521)
++......++++++ - |.++.+++..++.+++.+.+..|.+.|+.+ .++-++.. ..+......+.
T Consensus 238 ~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~ 317 (477)
T TIGR01301 238 SKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVV 317 (477)
T ss_pred cccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 01111122333332 2 568889999999999999999999988874 45543321 12233344455
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccch----------------------hHHHHHHHH
Q 009978 373 MAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS----------------------PVMASAWLT 430 (521)
Q Consensus 373 ~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~ 430 (521)
..+.+++..++.+|+|+|+ ....++.++.++++....+.+. .........
T Consensus 318 ~~i~s~~l~~l~~~~g~~k--------~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (477)
T TIGR01301 318 LGITSIGMEKLCRGWGAGK--------RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAI 389 (477)
T ss_pred HHHHHHHHHHHHHHhccch--------hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHH
Confidence 5566677778888887431 2323333333333222221110 122222233
Q ss_pred HHHHHHhhhhhhhHHHHHhhhc--cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc-chHHHHHHHHHHHHHHHHHHHH
Q 009978 431 LAIGMKSFSHSGFLVNLQEIAP--QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG-SFQGFLLLTSLLYFLSALFYII 507 (521)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 507 (521)
++.........+......+..+ +..|..+|+.|.+..+.+.+.....|.+.+..| +...++.+.++.++++.++.++
T Consensus 390 ~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~ 469 (477)
T TIGR01301 390 LGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALI 469 (477)
T ss_pred hhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHH
Confidence 3444443333333344444443 466999999999999999999999999777766 3456777777777777766555
Q ss_pred hc
Q 009978 508 FS 509 (521)
Q Consensus 508 ~~ 509 (521)
..
T Consensus 470 ~~ 471 (477)
T TIGR01301 470 LL 471 (477)
T ss_pred hC
Confidence 43
No 102
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.93 E-value=2.3e-21 Score=191.35 Aligned_cols=360 Identities=18% Similarity=0.124 Sum_probs=260.2
Q ss_pred chhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHH-HHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHH
Q 009978 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW-GVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNN 212 (521)
Q Consensus 134 ~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~-~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~ 212 (521)
+..++..++..+..++..|+.|.++|+-|+||.++. ...+..+++.++.+....+++...+.-++.-++.+...+..++
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678889999999999999999999988775554 4455555666666653345555555566666777888899999
Q ss_pred HHHhcCCchhh--------------------------HHHHHHHHhhhhhhhHHHHHHHHHhhhc--------cCchhHH
Q 009978 213 MVARWFPQTER--------------------------ARAVAIAMGGFTSGNAIGLVLSPILMSQ--------AGIFGPF 258 (521)
Q Consensus 213 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~gw~~~f 258 (521)
++.|..+++++ ++..+.-.....+|.++.-++.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8999998888889988887776655432 2247888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCC-chhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHH
Q 009978 259 VIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (521)
Q Consensus 259 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 337 (521)
.+.++..++..+..++..|+.|..++.. ...-..... ++..+.+|+..|.|.+..+++..+++.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~---------------~~l~~t~k~~~~~~~~~~fLia~~l~~ 294 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGF---------------KRLWRTFKEIRKLRQLFLFLIAYFLYS 294 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHH---------------HHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 8888888877777777777776532111 111101111 112235667778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 009978 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
-+...+......|.++.+|++..+...+..+..+.+++|.++.+++.||+|.|.. +.+.........+.+..+.
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~------~~l~~~l~~~~~i~~~g~~ 368 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK------RTLLISLILWIIIPLYGLF 368 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998821 1111111111122222221
Q ss_pred -------ccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009978 418 -------AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQG 489 (521)
Q Consensus 418 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 489 (521)
...+.+.+++..++.+.+.+...+..-++..++.| ++.++.+|++.......+.+||.+.|.+.+.+|+.+.
T Consensus 369 G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~ 448 (477)
T PF11700_consen 369 GFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRY 448 (477)
T ss_pred HhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 12334444444444444444445555555555555 6889999999999999999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCccc
Q 009978 490 FLLLTSLLYFLSALFYIIFSTGERV 514 (521)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (521)
.+....++.+++.+++.....++.+
T Consensus 449 g~~~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 449 GFLFLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred HHHHHHHHHHHHHHHHhhccchhhh
Confidence 9999999998888888766554443
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=5.2e-22 Score=198.43 Aligned_cols=335 Identities=15% Similarity=0.089 Sum_probs=221.6
Q ss_pred hhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH----hcch-HHHHHHHHHHHHHHhhhhhccc----cchH
Q 009978 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGK-IIMAWGVALWSLATFLTPWAAD----TSLL 190 (521)
Q Consensus 120 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr----~Grr-~~~~~~~~~~~~~~~l~~~~~~----~~~~ 190 (521)
.....+.+++|+++.++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++.++....+. ..++
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34566778899999999999999999999999999999999 6774 5566777777777665544421 2245
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhcC-CchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh-------ccCchhHHHHHH
Q 009978 191 ALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIFG 262 (521)
Q Consensus 191 ~l~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gw~~~f~~~~ 262 (521)
.+++..++.+++.........++.+|+. ++++|++..++......+|..+++.+...+.. ..+|+..+.+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 6666677777777777778889999988 55789999899888888888887765544433 246888888888
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHH
Q 009978 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (521)
Q Consensus 263 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 342 (521)
+++++..+..++..+|++++++ +++.+..++++.++|||.++.+++..++.......
T Consensus 191 ii~~v~~~~~~~~~~e~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~ 247 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTPEV-----------------------DNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVT 247 (444)
T ss_pred HHHHHHHHHHhCCeEEecCCCC-----------------------cCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 7776665555554444322110 01122345678889999999888877776666655
Q ss_pred HHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchh
Q 009978 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (521)
Q Consensus 343 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (521)
.....+.|.+...+ ++...+.+.....+..+++.++.+++.||+++|+ ...............+.+...++.
T Consensus 248 ~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 319 (444)
T PRK09669 248 RGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR-------AFKWTIVAFVILSALIFFIPPSNV 319 (444)
T ss_pred HhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-------HHHHHHHHHHHHHHHHHHhCcchH
Confidence 55544444444333 2233344455556777788889999999998882 222222111111111122222344
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHhhhc--------cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
+..++..++.....+...+...+...+..+ +..|..+|..+....+|..+|+.+.|.+.+..|
T Consensus 320 ~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 320 WLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333333333333334445556666666653 235778899999999999999999999998776
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.91 E-value=1.5e-20 Score=185.02 Aligned_cols=393 Identities=12% Similarity=0.085 Sum_probs=233.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhh-hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-cchHHHHHHHHHHHHHH
Q 009978 101 VSMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLAT 178 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~~~~~~~~~ 178 (521)
+..++...+...+..+.+...+|.+ .+++|.++.+.+.+.+.+.....++++++|+++||+ ||||+++++.++..++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 4444445555555555565565655 566899999999999999999999999999999999 99999999999999998
Q ss_pred hhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCch--hhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchh
Q 009978 179 FLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (521)
Q Consensus 179 ~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~ 256 (521)
++++... .+...++++..+.++|.|...+...++++|.+|++ +|..++++.....++|..++|.+.+++.+.+||++
T Consensus 91 lll~~~~-~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~ 169 (493)
T PRK15462 91 VVLGASE-IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAM 169 (493)
T ss_pred HHHHHhh-cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHH
Confidence 7766531 12233444444555666777777889999999875 68999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCC---CCCCchhHHHH----------------HHHh-hcccc--------------
Q 009978 257 PFVIFGLSGFLWVLVWLSATSSTPDR---HPQISKYELEY----------------ILRE-KQKPL-------------- 302 (521)
Q Consensus 257 ~f~~~~~~~~i~~i~~~~~~~~~~~~---~~~~~~~~~~~----------------~~~~-~~~~~-------------- 302 (521)
.|.+.++..++..+..+...+..++. ++...+++... .... .....
T Consensus 170 ~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
T PRK15462 170 GFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLG 249 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987765444443333222111110 01111111000 0000 00000
Q ss_pred -ccCCCCCCCCCCchHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCcccchhHhHHHHHHHH
Q 009978 303 -LMGNKHKPATVIPPFRRLLSKM--PTWSIIVANAMHSWGFFVILSWMPIYFNFVY-----HIDLRQASWFSAVPWSVMA 374 (521)
Q Consensus 303 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~ 374 (521)
.......+ . . +.-|+| .+..+.+...+++..+....+-+..|.++.. |++ -..+++.++..+..+
T Consensus 250 ~~~~~~~~~-~--~---~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii 322 (493)
T PRK15462 250 VLAKIYRKA-E--N---QKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVM 322 (493)
T ss_pred HHHHHHHhc-C--C---HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHH
Confidence 00000000 0 0 000112 1223333344444444444555566665532 222 235667788888888
Q ss_pred HHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc---c----chhHHHHHHHHHHHHHHhhhhhhhHHHH
Q 009978 375 FTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA---A----KSPVMASAWLTLAIGMKSFSHSGFLVNL 447 (521)
Q Consensus 375 i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (521)
+.+++..++-.|..+++.......|......+...+...+.+.. . .+.++.+...++......+..|...+..
T Consensus 323 ~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~ 402 (493)
T PRK15462 323 LCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQI 402 (493)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHH
Confidence 88888888888875543333333444444433333333332211 1 1233333333333334445556666777
Q ss_pred Hhhhc-cchhhHHhHHHHHH-HHHHHHHHHHHHHHhhc-----------ccchHHHHHHHHHHHHHH
Q 009978 448 QEIAP-QYSGVLHGISNTAG-TFAAILGTVGAGFFVEL-----------VGSFQGFLLLTSLLYFLS 501 (521)
Q Consensus 448 ~~~~~-~~~g~~~g~~~~~~-~~g~~~~~~~~g~l~~~-----------~g~~~~~~~~~~~~~~~~ 501 (521)
.++.| +.+|..+|.+.... .+|..++..+.+...+. ...|...|...+...+++
T Consensus 403 ~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 403 TRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 77777 58999999986643 56666666666555311 113556777766655544
No 105
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.91 E-value=5.8e-22 Score=184.10 Aligned_cols=392 Identities=15% Similarity=0.150 Sum_probs=285.2
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHH
Q 009978 91 EFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (521)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~ 170 (521)
.+..++||.+++..++..+.+.+.+..+++...+...-+| +....-|+.-+|++.+....+++-|+.||+|-|...+++
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 3456788999999999999999999899998888888888 777888999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccc----cchH--HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHH
Q 009978 171 VALWSLATFLTPWAAD----TSLL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL 244 (521)
Q Consensus 171 ~~~~~~~~~l~~~~~~----~~~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 244 (521)
....++|..+-..+.. +.++ ....+..+.+.+..........+..-||++++|..+..+-..+..+|.++|.++
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 9999999988655532 3455 677888888888888777777888899999999999999999999999999999
Q ss_pred HHHhhhcc------Cchh--HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCch
Q 009978 245 SPILMSQA------GIFG--PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP 316 (521)
Q Consensus 245 ~~~l~~~~------gw~~--~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (521)
...+..+- .|.. .|+..++++.+.+++..+..+++|+.++...... ..+.+..++
T Consensus 196 ppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~-----------------~~~~~f~~s 258 (480)
T KOG2563|consen 196 PPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA-----------------LQDASFPKS 258 (480)
T ss_pred cceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh-----------------hhcCcHHHH
Confidence 88887643 3544 4555556555555666666666665544321111 012336678
Q ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcch
Q 009978 317 FRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTL 396 (521)
Q Consensus 317 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~ 396 (521)
+++.++|+++....+++......+++..+.+..-+.. .|++...+|+......+++++++.+.|.+.||.++.+.
T Consensus 259 i~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~---- 333 (480)
T KOG2563|consen 259 IKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL---- 333 (480)
T ss_pred HHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH----
Confidence 8999999999999999888888888887777655555 57888889999999999999999999999999887632
Q ss_pred hHHHHHHHHHHHHHHH-HHHHh----ccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHH
Q 009978 397 TRKILQSIGFIAPGIA-LIGLT----AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAI 471 (521)
Q Consensus 397 ~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 471 (521)
... +......+. +.+.. ............+++.+..+..+...-...+..+|..-++..|+.+..+++-++
T Consensus 334 ---~~~-v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~ 409 (480)
T KOG2563|consen 334 ---TTL-VLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGV 409 (480)
T ss_pred ---HHH-HHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHH
Confidence 111 111111111 11111 122333333344444444444444444556667788888999999999999999
Q ss_pred HHHHHHHHHhhcccc---hHHHHHHHHHHHHHHHHHHHHhc
Q 009978 472 LGTVGAGFFVELVGS---FQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 472 ~~~~~~g~l~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
+-..+.+...+..+. +...-+.....++++.++..+++
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r 450 (480)
T KOG2563|consen 410 ILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFR 450 (480)
T ss_pred HHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhh
Confidence 999999999887651 22223333344444444444443
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.90 E-value=5.5e-22 Score=197.97 Aligned_cols=367 Identities=12% Similarity=0.008 Sum_probs=233.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhc-----chHHHHHHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKIIMAWGVAL 173 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~G-----rr~~~~~~~~~ 173 (521)
..+.++...++..+..........+.+.+++|+++++++...++..++..+-.+ +|+++||++ ||+.++++.++
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 345555666777777633444555666667999999999999999999998555 999999997 77777877766
Q ss_pred HH-HHHhhhhhccccchHH-HHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHH---HHHHHhhhhhhhHHHHHHHHHh
Q 009978 174 WS-LATFLTPWAADTSLLA-LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARA---VAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 174 ~~-~~~~l~~~~~~~~~~~-l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~g~~~g~~l~~~l 248 (521)
.. +.....+.. ++... ..+..++.+++.+...++..++..|..+ +++... .+......++|.++|+.+++.+
T Consensus 105 ~~~~~~~~l~~~--~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 105 GSAILYGLLPGK--VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHhcccc--cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 63 443334433 44443 4447899999999999999999999998 555443 3333444558999999999999
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHH
Q 009978 249 MSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPD-RHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (521)
Q Consensus 249 ~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (521)
.+.++|+..|++.+++.++..+.. ...+|++. ..+...+++......... ...+...+.....++.+++|.++
T Consensus 182 ~~~~~~~~~f~~~a~l~ll~~~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~i~ 255 (468)
T TIGR00788 182 LDKTLTRILFLITAALLLLQLFVS-NLSKERRAFVRPRIGTYLEMNMALLTL-----GVLANVKVQILGLRGAIQLLEIA 255 (468)
T ss_pred HHhcCcchHHHHHHHHHHHHHHHH-Hhcccccccccccccccchhhhhhhhh-----hHHHHHHHHHHHHHHHHhcHHHH
Confidence 999999999999988877764433 34455431 111100000000000000 00000001123455667888888
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHH
Q 009978 328 SIIVANAM-HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (521)
Q Consensus 328 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (521)
...+..++ +.........+. .+..+..|+++.+.|......+++.+++..+.+++.+|++.| .++.++.
T Consensus 256 ~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r---------~~l~~~~ 325 (468)
T TIGR00788 256 KPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR---------LLFGVTT 325 (468)
T ss_pred HHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH---------HHHHHHH
Confidence 76666665 322222111111 122234899999999999999998898988888888887766 3334444
Q ss_pred HHHHHHHHHHh-c---------cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHH
Q 009978 407 IAPGIALIGLT-A---------AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTV 475 (521)
Q Consensus 407 ~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~ 475 (521)
++.++..+... . .+..+......++.....+........++.+..| +.+|+.+++.+++.++|..+++.
T Consensus 326 ~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 326 LLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred HHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 43333332211 0 0112222222223333333444444555555655 68999999999999999999999
Q ss_pred HHHHHhhccc
Q 009978 476 GAGFFVELVG 485 (521)
Q Consensus 476 ~~g~l~~~~g 485 (521)
++|.+.+..|
T Consensus 406 ~gg~l~~~~g 415 (468)
T TIGR00788 406 LGVLLMETIG 415 (468)
T ss_pred HHHHHHHHcC
Confidence 9999999876
No 107
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.90 E-value=6.9e-21 Score=179.53 Aligned_cols=277 Identities=13% Similarity=0.061 Sum_probs=198.3
Q ss_pred cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc---------------
Q 009978 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--------------- 251 (521)
Q Consensus 187 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------------- 251 (521)
.+++.++++-++.|.|.+...+..+.++++..++|++++.+++.+..+++|..+||.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~ 87 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE 87 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence 78999999999999999999999999999999999999999999999999999999999988732
Q ss_pred -cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHH
Q 009978 252 -AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII 330 (521)
Q Consensus 252 -~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (521)
.+|+++|++.+.+.++..+++.+.. .|+.+++.+++ ..+ ++. ...++.+++|.++...
T Consensus 88 ~~~~~~~yl~ia~~~~~~~i~~~~~~--~p~~~~~~~~~---------------~~~--~~~--~~~~~~~~~~~~~l~~ 146 (310)
T TIGR01272 88 AAKVHTPYLLLAGALAVLAIIFAFLP--LPELQEADVAR---------------VSS--GDT--TQKTSAFQFTHLVLGA 146 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc--CCCCCcccccc---------------ccc--ccc--cchhhHHhhHHHHHHH
Confidence 3699999977776555544443321 11111100000 000 000 1123467788899888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHH
Q 009978 331 VANAMHSWGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (521)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (521)
+..+++.....++..|.+.|+.+. +|+++.+.+...+....+.++|+++.+++.||+++++ .+..+..+
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~---------~l~~~~~l 217 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR---------YLAFNAFL 217 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH---------HHHHHHHH
Confidence 888888889999999999999864 5899999999999999999999999999999999872 22222222
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009978 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (521)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 488 (521)
..+..+.....+.....+...++ +.+.+...|.......+..|++.+++.++. .+..+|++++|.+.|.+.|..| .+
T Consensus 218 ~~~~~~l~~~~~~~~~~~~~~l~-g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~ 294 (310)
T TIGR01272 218 AVLLSIGAALTHGYVAMWFVLAL-GLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQ 294 (310)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-ch
Confidence 22222222222233222222333 344445556656556666666677777775 6778999999999999999887 77
Q ss_pred HHHHHHHH
Q 009978 489 GFLLLTSL 496 (521)
Q Consensus 489 ~~~~~~~~ 496 (521)
..+++...
T Consensus 295 ~a~~v~~~ 302 (310)
T TIGR01272 295 LAFALPVP 302 (310)
T ss_pred HHHHHHHH
Confidence 77664433
No 108
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.90 E-value=2.9e-28 Score=244.78 Aligned_cols=398 Identities=18% Similarity=0.189 Sum_probs=254.8
Q ss_pred HHHHHHHhhhhhhhhhhhhhhh--hhhcC---------CcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH
Q 009978 105 ALALALCNADRVVMSVAIVPLS--LAHGW---------SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~---------s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~ 173 (521)
.++.+..+++....+...+... ..++. +..+.+++.+...+|..+|++++|+++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3444666666666665555444 22222 223568999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccc---chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh
Q 009978 174 WSLATFLTPWAADT---SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (521)
Q Consensus 174 ~~~~~~l~~~~~~~---~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 250 (521)
..++.++.+++ + +++.+.++|++.|++.|...+....++.|..|+++|++..++.+....+|.+++..++..+..
T Consensus 86 ~~i~~~~~~~~--~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 86 MIIGSILIAFA--PSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred ccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 7 999999999999999999999999999999999999999999999999999998888766544
Q ss_pred cc---CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCc-hhHHHHHHHhhccc------cccCC--CCCCCCCCchHH
Q 009978 251 QA---GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQIS-KYELEYILREKQKP------LLMGN--KHKPATVIPPFR 318 (521)
Q Consensus 251 ~~---gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~ 318 (521)
.. +||..+++.++++++..+.. ...||+|+...... .+|.++..++.++. ..... .++.++....++
T Consensus 164 ~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (451)
T PF00083_consen 164 YSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWR 242 (451)
T ss_pred ccccccccccccccccccccccccc-cccccccceecccccccccccccccccccccccccccccccccccccccceeee
Confidence 33 49999999888877655444 56788886532221 12222222221100 00000 001111113455
Q ss_pred HHHhcch----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 319 RLLSKMP----TWSIIVANAMH-SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (521)
Q Consensus 319 ~~~~~~~----~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (521)
++++++. +.......... ..+......+.+.++++ .+.+.. -.......+...++.++..++.||+|||+..
T Consensus 243 ~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~ 319 (451)
T PF00083_consen 243 DLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL 319 (451)
T ss_pred eccccccccccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccccccccccccccccccc
Confidence 6666543 22222222222 22334455556666655 576665 2223344455666777778999999999432
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHh-----ccch----hHHHHHHHHHHHHHHh-hhhhhhHHHHHhhhc-cchhhHHhHH
Q 009978 394 VTLTRKILQSIGFIAPGIALIGLT-----AAKS----PVMASAWLTLAIGMKS-FSHSGFLVNLQEIAP-QYSGVLHGIS 462 (521)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~ 462 (521)
..+....++....+. ..+. ....+....+...... ...+....+..|.+| +.|+++.|+.
T Consensus 320 ---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~ 390 (451)
T PF00083_consen 320 ---------IIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLS 390 (451)
T ss_pred ---------ccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 222222222222221 1121 1122222222222222 233444567788888 6999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH-HHHHHhccCccccccc
Q 009978 463 NTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA-LFYIIFSTGERVNFDE 518 (521)
Q Consensus 463 ~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 518 (521)
...+++++++++.+...+.+..+ ....+.+.+++.+++. +.+.+.++.++++.+|
T Consensus 391 ~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~e 446 (451)
T PF00083_consen 391 YAVGRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEE 446 (451)
T ss_pred ccccccccccccccccccccccc-ccccchhhHHHHHHHHhheeEEEeeCCCCCHHH
Confidence 99999999999999998888776 3444555444444444 4445566666665544
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.89 E-value=2.2e-20 Score=187.07 Aligned_cols=346 Identities=11% Similarity=0.033 Sum_probs=209.5
Q ss_pred HHHHHhhhhhhhhh-hhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh----cchHHH-HHHHHHHHHHHhh
Q 009978 107 ALALCNADRVVMSV-AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY----GGKIIM-AWGVALWSLATFL 180 (521)
Q Consensus 107 ~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~----Grr~~~-~~~~~~~~~~~~l 180 (521)
..+..........+ ..+++.+.+|+++.++|.+.++..+..++..++.|+++||. ||||.. .++.+...+..++
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 33333333333333 34566677899999999999999999999999999999996 777644 5555544444433
Q ss_pred hhhcc---cc--chHHHHHHHHHHhhhhcchhhHHHHHHHhcCC-chhhHHHHHHHHhhhh-----hhhHHHHHHHHHhh
Q 009978 181 TPWAA---DT--SLLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFT-----SGNAIGLVLSPILM 249 (521)
Q Consensus 181 ~~~~~---~~--~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~g~~l~~~l~ 249 (521)
....+ .+ ..+.+++..++.+++.+...+...++..+..+ +++|.+..++...+.+ ++..++|.+++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g 175 (448)
T PRK09848 96 VFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSP 175 (448)
T ss_pred HHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 22111 01 23334555667788888888777887777664 4678887776654433 44555555554331
Q ss_pred hcc--CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHH
Q 009978 250 SQA--GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (521)
Q Consensus 250 ~~~--gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (521)
... +|.....+.+++.++..++.....+|+++++ .++....+.++.+++||.++
T Consensus 176 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~------------------------~~~~~~~~~~~~l~~n~~f~ 231 (448)
T PRK09848 176 EEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRI------------------------VAQPSLKISLQTLKRNRPLF 231 (448)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCC------------------------ccCCCHHHHHHHHhCCchHH
Confidence 111 1211112222222222222222233322111 01112334577899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
...+..++............|.|+++.+|.++...++......++.+++.++.+++.||+++| .....+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~---------~~~~~g~~ 302 (448)
T PRK09848 232 MLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK---------NTFLIGAL 302 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHH
Confidence 998888888888888888888888887887766555544444566778889999999999987 22233333
Q ss_pred HHHHHHHHHhc--cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc--------cchhhHHhHHHHHHHHHHHHHHHHH
Q 009978 408 APGIALIGLTA--AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVGA 477 (521)
Q Consensus 408 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~~~~~~~ 477 (521)
+..+..+.+.. ..+.+......++.....+...+...+...+..+ ++.|..+|+.+....+|..+++.+.
T Consensus 303 ~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 303 LGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33322222222 2233333222222222233333444555555544 2359999999999999999999999
Q ss_pred HHHhhccc
Q 009978 478 GFFVELVG 485 (521)
Q Consensus 478 g~l~~~~g 485 (521)
|.+.+..|
T Consensus 383 g~~l~~~G 390 (448)
T PRK09848 383 AFILGLSG 390 (448)
T ss_pred HHHHHHcC
Confidence 99987665
No 110
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.89 E-value=2e-20 Score=188.06 Aligned_cols=354 Identities=11% Similarity=-0.008 Sum_probs=227.6
Q ss_pred HHHHHHhhhhhhhhhh-hhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHh----Hhcc-hHHHHHHHHHHHHHHh
Q 009978 106 LALALCNADRVVMSVA-IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGG-KIIMAWGVALWSLATF 179 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~d----r~Gr-r~~~~~~~~~~~~~~~ 179 (521)
++.+...+....+... ...+.+.+|+++.++|.+..+..+.-++..|+.|+++| |+|| |+.++++.+..+++..
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 3333344444444444 44556667999999999999999999999999999999 5698 5667778888777766
Q ss_pred hhhhccc--c--chHHHHHHHHHHhhhhcchhhHHHHHHHhcC-CchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc---
Q 009978 180 LTPWAAD--T--SLLALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--- 251 (521)
Q Consensus 180 l~~~~~~--~--~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--- 251 (521)
++...+. + .+..+++..++.+++.....+...++..|.. ++++|.+..++...+.++|..+.+.+...+.+.
T Consensus 93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~ 172 (473)
T PRK10429 93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG 172 (473)
T ss_pred HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6544311 1 1345566667778888888888999999998 688999999997777777766666555443222
Q ss_pred ----cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHH
Q 009978 252 ----AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (521)
Q Consensus 252 ----~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (521)
.+|+....+.+++.++..+..++..+|.++..... .+++++.+.++.++.+++||.++
T Consensus 173 ~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~------------------~~~~~~~~~~~~~~~~~~n~~~~ 234 (473)
T PRK10429 173 GDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV------------------SAEGSHLTLKDIVALIYKNDQLS 234 (473)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc------------------cccccCCCHHHHHHHHhcCHHHH
Confidence 24666666666665555545544445543211100 00111223345566777899988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
.+++..++..........+.+.|.+...+ +....+.+.....++.+++.++.+++.||+|+|+ .........
T Consensus 235 ~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~-------~~~~~~~~~ 306 (473)
T PRK10429 235 CLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI-------LWAGASIFP 306 (473)
T ss_pred HHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-------HHHHHHHHH
Confidence 88888888877777766666666555333 4455666666667888899999999999999882 222222211
Q ss_pred HHHHHHHHH---hccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc--------cchhhHHhHHHHHHHHHHHHHHHH
Q 009978 408 APGIALIGL---TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVG 476 (521)
Q Consensus 408 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~~~~~~ 476 (521)
+.+...+.. ...++.+..++..++.....+.......++..|..+ +..|..+|.......++..+++.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 307 VLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 112333333333333323333344445555666543 235669999999999999999999
Q ss_pred HHHHhhccc
Q 009978 477 AGFFVELVG 485 (521)
Q Consensus 477 ~g~l~~~~g 485 (521)
.|.+.+..|
T Consensus 387 ~g~~l~~~G 395 (473)
T PRK10429 387 IGVVLGLIG 395 (473)
T ss_pred HHHHHHHcC
Confidence 999998766
No 111
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.89 E-value=7.3e-21 Score=189.24 Aligned_cols=337 Identities=18% Similarity=0.185 Sum_probs=248.1
Q ss_pred hhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHh----HhcchH-HHHHHHHHHHHHHhhhhhc-c-c----cc
Q 009978 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGGKI-IMAWGVALWSLATFLTPWA-A-D----TS 188 (521)
Q Consensus 120 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~d----r~Grr~-~~~~~~~~~~~~~~l~~~~-~-~----~~ 188 (521)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+|||| .++++.+..+++.+++... + . ..
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4456667778999999999999999999999999999999 789766 5667888888887776654 2 0 12
Q ss_pred hHHHHHHHHHHhhhhcchhhHHHHHHHhcCC-chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-------CchhHHHH
Q 009978 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVI 260 (521)
Q Consensus 189 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------gw~~~f~~ 260 (521)
...+.+..++..++.........++..|..+ +++|.+..+....+..+|.++...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3345777777789988889999999999997 468999999999988888876666666655322 58888888
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHH
Q 009978 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (521)
Q Consensus 261 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 340 (521)
.+++.++..++..+..+|.+++. ++++++.+.++.++.+++||.++.+.+..++.....
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~---------------------~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~ 241 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEV---------------------TEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAF 241 (428)
T ss_pred HHHHHHHHhhhhhheeeeccccc---------------------cccccccccccchhhhcccchHHHHHHHHHHHHhhh
Confidence 88888887777777766621111 222234455667889999999999999999998888
Q ss_pred HHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccc
Q 009978 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (521)
Q Consensus 341 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (521)
.......+.|.++..|.+ ...+.+.....++.+++.++.+++.||+|+|+. ..........+...+.+...+
T Consensus 242 ~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~-------~~~~~~~~~~~~~~~~~~~~~ 313 (428)
T PF13347_consen 242 ALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV-------YIIGLLLAALGFLLLFFLGPG 313 (428)
T ss_pred hhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee-------hhhhHHHHHHHHHHHHHHHhh
Confidence 888888899998887776 566777778888999999999999999999842 222222222222222222213
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc--------cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
+.+...+..++.....+.......+...|+.+ +..|..+|+.+....++..+++.+.|.+.+..|
T Consensus 314 ~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 314 SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 44444444444444444444555555555554 346999999999999999999999999988765
No 112
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=1.9e-19 Score=166.74 Aligned_cols=355 Identities=14% Similarity=0.088 Sum_probs=256.6
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHH-HHHHHHHHHHHHhhhhhccc-cchHHHHHHHHHHhhhhcchhhHH
Q 009978 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII-MAWGVALWSLATFLTPWAAD-TSLLALLAMRAVVGLAEGVALPAM 210 (521)
Q Consensus 133 ~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~-~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~r~l~G~g~~~~~~~~ 210 (521)
.+..|...++..+..++.+|+.|.++|+.|+||. +-....+..++.+++.+.++ ..++..++...+..++.....+..
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3556788889999999999999999999997765 44555556666666777643 234555667788888888889999
Q ss_pred HHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh---h---------------hccCchhHHHHHHHHHHHHHHHH
Q 009978 211 NNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL---M---------------SQAGIFGPFVIFGLSGFLWVLVW 272 (521)
Q Consensus 211 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l---~---------------~~~gw~~~f~~~~~~~~i~~i~~ 272 (521)
++++.+..++++-++..++-.....+|+.+.-++.-.. . +...-|..+.+.++-.++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999998888888887777777777665553211 1 22246778888888888877777
Q ss_pred HHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 273 LSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFN 352 (521)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 352 (521)
++..++.++..... ....... -++.++.+++..+++.+..+++..+++.-+.+........|..
T Consensus 217 ~~~v~~~~~~~~~~-~~~l~~g---------------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~ 280 (438)
T COG2270 217 ILNVHDAEKISSPP-PTALRNG---------------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGA 280 (438)
T ss_pred Hhcccccccccccc-hHHHHHH---------------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 77776665432110 0000000 1112346778888899999999999999999999999999999
Q ss_pred HHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 009978 353 FVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLA 432 (521)
Q Consensus 353 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (521)
..+|++..+..++.....+..++|.++.|++.||++.|+. +...+. +....++..+........++..++++
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v-------l~~~lv-i~~~~~~~~~~~~~~~~f~i~gll~g 352 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV-------LMIGLV-ILSIAALYLIFLEGELDFWILGLLVG 352 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee-------ehHHHH-HHHHHHHHHHHccccHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999832 222222 22222222333223333333334555
Q ss_pred HHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhccC
Q 009978 433 IGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (521)
...++........+...++|++.++.+|+++..+.....+||.+.+.+.+.+|+.+..+....++.+++.++++..+.+
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 5555444444444445555579999999999999999999999999999999988888888888888887776666544
No 113
>PRK11462 putative transporter; Provisional
Probab=99.87 E-value=1.7e-18 Score=172.88 Aligned_cols=333 Identities=12% Similarity=0.066 Sum_probs=217.4
Q ss_pred hhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH----hcchH-HHHHHHHHHHHHHhhhhhccccc----hHH
Q 009978 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKI-IMAWGVALWSLATFLTPWAADTS----LLA 191 (521)
Q Consensus 121 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr----~Grr~-~~~~~~~~~~~~~~l~~~~~~~~----~~~ 191 (521)
....+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +|||| .++++.+..+++.+++...+..+ ...
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3445667789999999999999999999999999999997 58765 56667777887777665542111 445
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhcCC-chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-------CchhHHHHHHH
Q 009978 192 LLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVIFGL 263 (521)
Q Consensus 192 l~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------gw~~~f~~~~~ 263 (521)
+++..++..++.........++.+|..+ +++|.+..++...+..+|..+++.+...+.... +|+....+.++
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 6667777788888888889999999986 688999999999999999888877766555433 47777777777
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 009978 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 343 (521)
+.++..++.+...+|+++.+. ++.+.++.++..++||.++.+....++........
T Consensus 192 i~~i~~~i~~~~~kE~~~~~~------------------------~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~ 247 (460)
T PRK11462 192 VAFMMLAFCFFTTKERVEAPP------------------------TTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVR 247 (460)
T ss_pred HHHHHHHHHHhcceeccCCCc------------------------cCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 666655555544444322110 11123346678888998887776666666665555
Q ss_pred HHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhH
Q 009978 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (521)
Q Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
......|.+...|. +...+.+.....++.+++.++++++.||+++|+ ...............+.+....+..
T Consensus 248 ~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (460)
T PRK11462 248 GGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVT-------IFWWTNALLAVISLAMFFVPMQASI 319 (460)
T ss_pred HhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-------HHHHHHHHHHHHHHHHHHhchhHHH
Confidence 55555555554443 333455666777888889999999999998872 2221111111111111111122222
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHhhhc-------c-chhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAP-------Q-YSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
......++.....+...+.......+..+ + ..|..++.......+|..+++.+.|.+.+..|
T Consensus 320 ~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 320 TMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22222222222223333333445555544 2 33566778788999999999999999987655
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.85 E-value=4.2e-18 Score=163.22 Aligned_cols=354 Identities=16% Similarity=0.129 Sum_probs=257.3
Q ss_pred HHHHHHhhhhhhhhhhhh-hhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH----hcc-hHHHHHHHHHHHHHHh
Q 009978 106 LALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGG-KIIMAWGVALWSLATF 179 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr----~Gr-r~~~~~~~~~~~~~~~ 179 (521)
+.-+............+. .+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +|| |+.++.+.+..++.+.
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~ 98 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV 98 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH
Confidence 333444343334444444 4566789999999999999999999999999999997 576 4567788888888888
Q ss_pred hhhhccc----cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCC-chhhHHHHHHHHhhhhhhhHHHHHHHHHhhh----
Q 009978 180 LTPWAAD----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMS---- 250 (521)
Q Consensus 180 l~~~~~~----~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 250 (521)
++..+++ .+....++...+.+++.........++.++..+ ++||.+..++.+...++|..+...+...+..
T Consensus 99 l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~ 178 (467)
T COG2211 99 LLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG 178 (467)
T ss_pred HHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8877742 345667778889999999999999999999884 6789999999999999997777666655543
Q ss_pred ---ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHH
Q 009978 251 ---QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (521)
Q Consensus 251 ---~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (521)
..||+....+.+++..+..+.+++-.+|++.+... .++..+.+...++...++||.++
T Consensus 179 ~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~-------------------~~~~~~~~~~~~~~~~~~Nrp~~ 239 (467)
T COG2211 179 GDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQP-------------------TKTGVKLKLKDSFLLIFKNRPLL 239 (467)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCcccc-------------------CcccccccHHHHHHHHHccchHH
Confidence 34688888888888887777777777666542211 11112233344556788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
..++..++...+.+........|.+...|.+.............+.+++.++..++.+|+|+|+ .......+.
T Consensus 240 ~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~-------~~~~~~~~~ 312 (467)
T COG2211 240 LLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK-------LFLIGLLLL 312 (467)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH-------HHHHHHHHH
Confidence 9999888888888888888888888878887777777777777777777899999999999992 233332222
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc--------cchhhHHhHHHHHHHHHHHHHHHHHHH
Q 009978 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVGAGF 479 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~~~~~~~g~ 479 (521)
..+...+.+...++....++..++.....+...+..++.+.+..+ +..|..+|....+..+|.+++..+.|+
T Consensus 313 ~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 313 AVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred HHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222233333344444444455555556666666777666553 356889999999999999999999999
Q ss_pred Hhhccc
Q 009978 480 FVELVG 485 (521)
Q Consensus 480 l~~~~g 485 (521)
+.+..|
T Consensus 393 ~L~~~G 398 (467)
T COG2211 393 ILGAIG 398 (467)
T ss_pred HHHHcC
Confidence 998776
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.85 E-value=9e-18 Score=156.34 Aligned_cols=357 Identities=15% Similarity=0.114 Sum_probs=247.4
Q ss_pred hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhc-----chHH-HHHHHHHHHHHHhhhhhcc----c-------c
Q 009978 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKII-MAWGVALWSLATFLTPWAA----D-------T 187 (521)
Q Consensus 125 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~G-----rr~~-~~~~~~~~~~~~~l~~~~~----~-------~ 187 (521)
+..|++++....+.+.++..+... ..+.+|+.+|+.+ ||.. +..|.++.+.+..+..++. . +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899999999999998888765 5889999999998 7754 5556666666555443321 1 1
Q ss_pred ch-H--HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHH
Q 009978 188 SL-L--ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (521)
Q Consensus 188 ~~-~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~ 264 (521)
.+ + ...+.-.+.|+|.+....+..+++.|..|+|+|+++.++...+.-+|.+++..+.+.+.+.+.-.-..-+....
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 22 2 23455678899999999999999999999999999999999999999999999999998877643333333222
Q ss_pred HHHH---HHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHH
Q 009978 265 GFLW---VLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (521)
Q Consensus 265 ~~i~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 341 (521)
.++. .++..+- .|++..+.. ...++++.+..+.++++..+|+...+....++...+++
T Consensus 165 a~i~~~l~~ia~wg-~E~r~~~~~------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~ 225 (403)
T PF03209_consen 165 ALIALLLNLIALWG-QEPRRSRRA------------------AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFF 225 (403)
T ss_pred HHHHHHHHHHHHHh-cccCCcccc------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Confidence 2222 2222221 222221111 02233344556678888999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHH-HHhcCCCcchhHHHHHHHHHHHHHH---HHHHHh
Q 009978 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQSIGFIAPGI---ALIGLT 417 (521)
Q Consensus 342 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 417 (521)
.-...+.+|--+.+|+++.+..-+......+..++..+.+++..| .+++ + ....++..... .+....
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-------~--~a~~G~~~~~~~f~lii~a~ 296 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-------R--TAALGCLLGALAFALIILAG 296 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-------H--HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999898888763 3333 1 11222222222 222223
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhh-ccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcc----c-----ch
Q 009978 418 AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGISNTAGTFAAILGTVGAGFFVELV----G-----SF 487 (521)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~----g-----~~ 487 (521)
...+.+.+....++.+...+.........+.+.. +++.|...|.....+.+...++..++|.+.|.. + .|
T Consensus 297 ~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY 376 (403)
T PF03209_consen 297 PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAY 376 (403)
T ss_pred hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHH
Confidence 3344555444444433334444444444444444 579999999999999999999999999988732 2 37
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Q 009978 488 QGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
..+|.+-++..++++++...+.+
T Consensus 377 ~~VF~lEa~ll~~a~~ll~~l~~ 399 (403)
T PF03209_consen 377 GVVFALEAVLLLAALVLLGRLDR 399 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 77788877777777766655443
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.84 E-value=4.2e-18 Score=161.56 Aligned_cols=403 Identities=13% Similarity=0.116 Sum_probs=247.9
Q ss_pred HHHHHHHHHHHhhhhhhhh-hhhhhhhhhhc----CCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-cchHHHHHHHHHH
Q 009978 101 VSMLALALALCNADRVVMS-VAIVPLSLAHG----WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALW 174 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~~~~~ 174 (521)
+..+....+..-+..+.+. ...-++..+++ .|+++..-+.+.|..-.-+..+++|+++||+ |+|+++.+|.+++
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 4444555555555554443 33445555555 9999999999999888889999999999997 9999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCch--hhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 252 (521)
.+|.++.+.....+...++++.++.++|.|..-+...++++|.+|++ +|...++++..+.++|+.++|.+.+++.+.+
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 99999988761126788999999999999999999999999999765 5788999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCC-----CCCCchhHHHH-H---------H---Hhhc-cc------------
Q 009978 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDR-----HPQISKYELEY-I---------L---REKQ-KP------------ 301 (521)
Q Consensus 253 gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~-----~~~~~~~~~~~-~---------~---~~~~-~~------------ 301 (521)
||+..|...++-..+.++..+...+..... +...+..+... . . .... +.
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~ 262 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILI 262 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888777666655543221111 11111111000 0 0 0000 00
Q ss_pred ---cccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----cccchhHhHHHHHHHH
Q 009978 302 ---LLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHID----LRQASWFSAVPWSVMA 374 (521)
Q Consensus 302 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~ 374 (521)
...+.-..++.. +.-++++ ....+.+...+++..+....+.+..|..+..+.+ ....++..+...+.-+
T Consensus 263 ~~~~~~~~~~~~~~~-~er~r~~---~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Ii 338 (498)
T COG3104 263 AIIYFAEAFRSPKVF-DERRRLL---AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFII 338 (498)
T ss_pred HHHHHHHHhccCccH-HHHHHHH---HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHH
Confidence 000000000000 1111111 1222333333333333333344444444432211 1235667788888888
Q ss_pred HHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh---cc-----chhHHHHHHHHHHHHHHhhhhhhhHHH
Q 009978 375 FTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT---AA-----KSPVMASAWLTLAIGMKSFSHSGFLVN 446 (521)
Q Consensus 375 i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (521)
+.+++..++..|.++++.......+..+...+..++..++... .. .+.++.+...++....-.+..+.-.+.
T Consensus 339 i~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~ 418 (498)
T COG3104 339 LFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSM 418 (498)
T ss_pred HHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 8888999999887776544444444444444444444443333 11 123333333333333333444444445
Q ss_pred HHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHH------HhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 447 LQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGF------FVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 447 ~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
+....| ...+.+++++......+..++..+.+. ..+... ....|..++...++..+..+..
T Consensus 419 ~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~-~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 419 VTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFI-EGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhh-hhhhHHHHHHHHHHHHHHHHHh
Confidence 555555 588888888888887887777777663 223332 5677777777666555554443
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.82 E-value=2.3e-18 Score=171.89 Aligned_cols=292 Identities=16% Similarity=0.149 Sum_probs=227.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 178 (521)
..+.++++..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-|.+-+|.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34555566677777777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcc-------------------c----------------------------cc--hH-HHHHHHHHHhhhhcchhh
Q 009978 179 FLTPWAA-------------------D----------------------------TS--LL-ALLAMRAVVGLAEGVALP 208 (521)
Q Consensus 179 ~l~~~~~-------------------~----------------------------~~--~~-~l~~~r~l~G~g~~~~~~ 208 (521)
+++++-. . .+ ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 9877630 0 00 23 567889999999999999
Q ss_pred HHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc------------------C-chhHHHHHHHHHHHHH
Q 009978 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------------------G-IFGPFVIFGLSGFLWV 269 (521)
Q Consensus 209 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------g-w~~~f~~~~~~~~i~~ 269 (521)
...+|+-|...+++-...+|++.....+|.++|.++++++...+ | |..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986522 1 6677888888888888
Q ss_pred HHHHHhcCCCCCCCCCCchhHHHHHHHhhc-cccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 270 LVWLSATSSTPDRHPQISKYELEYILREKQ-KPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMP 348 (521)
Q Consensus 270 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 348 (521)
+..+++.++.|+...+....+.+....+.. ........++-++....++++++||.+...++...+....+.++.+|+|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 888887766665543311111111000000 0000000001123345678899999999999999999999999999999
Q ss_pred HHHHHHhCCCcccchhHhHHHHHHH-HHHHHHHHHHHHHHHhc
Q 009978 349 IYFNFVYHIDLRQASWFSAVPWSVM-AFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~-~i~~~~~g~l~dr~~~~ 390 (521)
-|++.++|.++..+..+.....+.. .+|.+++|++.+|+.-+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 9999999999999999887666654 56778999999988655
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.81 E-value=3.3e-18 Score=164.24 Aligned_cols=393 Identities=14% Similarity=0.144 Sum_probs=249.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhh--hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcc-hHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGV 171 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Gr-r~~~~~~~ 171 (521)
+.+|+.+.+..+..++.....+.+.+..-++.++ .+.+.+..|++.++..++.+++++..|++..|.+. |+.++.|.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 4457888888888888888888877776666666 78889999999999999999999999999999987 88889999
Q ss_pred HHHHHHHhhh-hhcc--ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 172 ALWSLATFLT-PWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 172 ~~~~~~~~l~-~~~~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
++.+++.++. .+.. ....+.++++|++.|+|.|. .....+|+++....++|.++++....+..+|.++||.+...+
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 9999999887 3332 22678899999999999776 677889999988889999999999999999999999888776
Q ss_pred hhc--cC-----------chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCc
Q 009978 249 MSQ--AG-----------IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIP 315 (521)
Q Consensus 249 ~~~--~g-----------w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (521)
..- .| +..+-|+.+++.++.++...+..+|.+....+.+.++.++ .+ .+.++.+..+-
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~ 259 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEE----EK-----SDIEKVKKPKL 259 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchh----hc-----cchhhhccCCh
Confidence 531 12 2346677778888777777777777655443221111000 00 00001111111
Q ss_pred hHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHH-HHH-HHHHHHHHHHHhcCCC
Q 009978 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMA-FTG-YLGGLLSDMLIQRGTS 393 (521)
Q Consensus 316 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-i~~-~~~g~l~dr~~~~~~~ 393 (521)
++ +..+.+.+..+...+......+..+.+....++++..++....+....... +.. +......-|+++...
T Consensus 260 d~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~- 332 (488)
T KOG2325|consen 260 DW------VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDK- 332 (488)
T ss_pred hH------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcc-
Confidence 11 123344455555555666666777777777788887776655444332222 222 222233334333100
Q ss_pred cchhHHHHHHHHHHHHHHHH-H--HHhccch---------------------------hHHHHHH--HHHHHHHHhhhhh
Q 009978 394 VTLTRKILQSIGFIAPGIAL-I--GLTAAKS---------------------------PVMASAW--LTLAIGMKSFSHS 441 (521)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~---------------------------~~~~~~~--~~~~~~~~~~~~~ 441 (521)
|..+...++....... . .+..... .+..+.. ++++..+-.....
T Consensus 333 ----r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~ 408 (488)
T KOG2325|consen 333 ----RRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTA 408 (488)
T ss_pred ----ceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccch
Confidence 0111111111111111 1 1111110 0000111 1111111111222
Q ss_pred hhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 442 GFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 442 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
....+...+.|++++++.|++......+..++|.+...+....| ++..+.+..+..++...++....
T Consensus 409 ~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~~l~~~~~ 475 (488)
T KOG2325|consen 409 LDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLVVAALWIVFL 475 (488)
T ss_pred HHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566678899999999999999999999999999999888 78887777776666655554443
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.78 E-value=2.1e-20 Score=187.14 Aligned_cols=380 Identities=15% Similarity=0.140 Sum_probs=3.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhh
Q 009978 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (521)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~ 182 (521)
.+++..+...+........+..+.++|+++..+.|++.+.+-++..+..++..++.+|..|-|.+-+|.++++++.++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 34444555566666777889999999999999999999999999999999999999998888899999999999998876
Q ss_pred hcc-----------c-------------------------------------cchHHHHHHHHHHhhhhcchhhHHHHHH
Q 009978 183 WAA-----------D-------------------------------------TSLLALLAMRAVVGLAEGVALPAMNNMV 214 (521)
Q Consensus 183 ~~~-----------~-------------------------------------~~~~~l~~~r~l~G~g~~~~~~~~~~~i 214 (521)
+-. . .-+..++++.++.|+|....++...+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 521 0 0135578899999999999999999999
Q ss_pred HhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc---------------------C-chhHHHHHHHHHHHHHHHH
Q 009978 215 ARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA---------------------G-IFGPFVIFGLSGFLWVLVW 272 (521)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~---------------------g-w~~~f~~~~~~~~i~~i~~ 272 (521)
-|..++++-+..+|++.+...+|.++|.++++.+...+ | |...|++.+++.++..+..
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998876421 2 6667777887777777777
Q ss_pred HHhcCCCCCCCCCCchhHHHHHH-HhhccccccCC------CCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 009978 273 LSATSSTPDRHPQISKYELEYIL-REKQKPLLMGN------KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILS 345 (521)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 345 (521)
+.++++.|+..+..++.+.+... ++.......+. ...-+.....++++++||.+....+..........++.+
T Consensus 247 ~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~t 326 (539)
T PF03137_consen 247 FFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFAT 326 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555542111111110000 00000000000 112344566778999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcccchhHhHHHHH-HHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH--HHHHHh-----
Q 009978 346 WMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI--ALIGLT----- 417 (521)
Q Consensus 346 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----- 417 (521)
+.|.|++.+++.++.++.++.....+ +.++|.+++|++.+|++-+.... .++.....++.... ..+.+.
T Consensus 327 F~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~---~~~~~v~~~v~~~~~~~~~~~~C~~~~ 403 (539)
T PF03137_consen 327 FLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA---AKFCIVVSIVSVILYSPLFFLGCPNPP 403 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH---HHHHHHHHHHHHHHHHHHHeecCCCCc
Confidence 99999999999999999988876665 55678899999999986542111 11111111111111 111100
Q ss_pred -------c---------------------------c---------chhHHHHHHHHHHHHH-HhhhhhhhHHHHHhhhcc
Q 009978 418 -------A---------------------------A---------KSPVMASAWLTLAIGM-KSFSHSGFLVNLQEIAPQ 453 (521)
Q Consensus 418 -------~---------------------------~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 453 (521)
. . .....+++..++..+. .....+........+.++
T Consensus 404 ~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~ 483 (539)
T PF03137_consen 404 IAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPE 483 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChh
Confidence 0 0 0001111122222222 222334445556666778
Q ss_pred chhhHHhHHHHHHH-HHHHHHHHHHHHHhhccc
Q 009978 454 YSGVLHGISNTAGT-FAAILGTVGAGFFVELVG 485 (521)
Q Consensus 454 ~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~g 485 (521)
+|+.+.|+...+.. +|.+-||++.|.+.|..-
T Consensus 484 ~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 484 QRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp ---------------------------------
T ss_pred hcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 99999999987776 788899999999999753
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=6.2e-16 Score=151.05 Aligned_cols=364 Identities=17% Similarity=0.125 Sum_probs=246.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcc-hhhHHHHHH----HHHHHHhhhhhHHHHhHhcchHHHHHHHH
Q 009978 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRS-FSGIVQSSF----LWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~g~~~s~~----~~~~~i~~~~~G~l~dr~Grr~~~~~~~~ 172 (521)
+.......+-.+..++.........+.....++.+.. ..+...... .+...+.++..|.++||+|||..+.+..+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3344445555555555555555666666555543322 223333333 67778899999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHHHHHHhhhh--cchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh
Q 009978 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAE--GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (521)
Q Consensus 173 ~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~--~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 250 (521)
...+..+...+. .+|.++ +.|+.. +.......++++|....++|...+|+.+.....+..++|.+++.+..
T Consensus 101 ~~~l~~~~~~~~---~~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~ 173 (463)
T KOG2816|consen 101 GTILPALCLLFQ---GYWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK 173 (463)
T ss_pred HHHHhHHHHHHH---HHHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 998888887775 344443 444332 34567889999999999999999999999999999999999999999
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHH
Q 009978 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII 330 (521)
Q Consensus 251 ~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (521)
..|.-..|.+..+..++..+......||+..++........ .............+........-.+|..+.++
T Consensus 174 ~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~ 246 (463)
T KOG2816|consen 174 FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLR-------ELTPGSLDSSHVADAFQSLTKVGPDRLLLLLL 246 (463)
T ss_pred hcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccc-------ccCCCcccchhhhhhhhhhcccCCCccchHHH
Confidence 99999999999999988888888888877554332210000 00000000001111111222222345555555
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHH-HHHHHHHhcCCCcchhHHHHHHHHHHH
Q 009978 331 VANAMHSWGFFVILS-WMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGG-LLSDMLIQRGTSVTLTRKILQSIGFIA 408 (521)
Q Consensus 331 l~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (521)
+..++.......-.. ..+.|++..++++..+.+.+.+...+...++.++.. .+...++.+ .++..++..
T Consensus 247 l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~---------~~i~lGl~~ 317 (463)
T KOG2816|consen 247 LVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK---------RLISLGLLS 317 (463)
T ss_pred HHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------hHhhHHHHH
Confidence 555544443332222 446778888999999999999999999999987766 667777777 355667777
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcc
Q 009978 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELV 484 (521)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 484 (521)
-.+..+...+....|..+....+........+...........++++|+++++...+..+...++|.+.+.++..+
T Consensus 318 ~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 318 EFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 7777777777777777665555544443333333334344455689999999999999999999999999887543
No 121
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.72 E-value=5.9e-15 Score=135.54 Aligned_cols=263 Identities=15% Similarity=0.076 Sum_probs=183.8
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+.++..+.+-.+....++ ..+|..-.+.+++|.+..|++.+.........+.+++.|.++||+|||+..++..++.
T Consensus 34 ~Fqr~yl~vY~La~~aDW----LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily 109 (354)
T PF05631_consen 34 RFQRKYLLVYLLAMAADW----LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILY 109 (354)
T ss_pred HHHHHHHHHHHHHHHHHH----hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 334444444444555444 3445444555789999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcC-----CchhhHHHHHHHH-hhhhhhhHHHHHHHHHh
Q 009978 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF-----PQTERARAVAIAM-GGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 175 ~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~-----~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l 248 (521)
+++++..- . ++++.++++|++.|++.+....+..++...-. |++..+..++... ...++-.+++.+++.++
T Consensus 110 ~~scl~k~-~--~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 110 SLSCLTKH-S--SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHHHHHHh-c--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 99887543 3 79999999999999999998888888664332 3344455555444 33445556666777777
Q ss_pred hhccCc--hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchH
Q 009978 249 MSQAGI--FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPT 326 (521)
Q Consensus 249 ~~~~gw--~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (521)
.+..+. ..+|.....+.++..++.....+|...+..+..+ ..+...+.++.+++||++
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~--------------------~~~~~~~a~~~i~~d~ri 246 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSS--------------------LSGSFREAWRAILSDPRI 246 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccc--------------------hHHHHHHHHHHHHcCchh
Confidence 776554 7889888888777777666555555432211000 011122355678889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHH
Q 009978 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM 386 (521)
Q Consensus 327 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr 386 (521)
+.+.++..+.-...+.+.....+-++. +-+....|++++.+.++.++|+.+..++..+
T Consensus 247 l~LG~~qslFE~smy~FVflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 247 LLLGLIQSLFEGSMYLFVFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHHHHHHHHheeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999888888877765443333432 1123447899999889999988877665543
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.67 E-value=3.6e-15 Score=146.99 Aligned_cols=375 Identities=15% Similarity=0.098 Sum_probs=229.0
Q ss_pred hhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-----cchHHHHHHHHHHHHHHhhhhhccc--cchH
Q 009978 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKIIMAWGVALWSLATFLTPWAAD--TSLL 190 (521)
Q Consensus 118 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-----Grr~~~~~~~~~~~~~~~l~~~~~~--~~~~ 190 (521)
.....+.+.+++|+++++...+.+...+...+ .++.|.++|-+ .||+.++++.++..++.+.++..+. .+..
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 34557788899999999999999999998876 77789999987 3566677777777666655555421 3566
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhcCC--chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHH
Q 009978 191 ALLAMRAVVGLAEGVALPAMNNMVARWFP--QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (521)
Q Consensus 191 ~l~~~r~l~G~g~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~ 268 (521)
...+.-++..+|......++.+++.|... ++.|+...+.......+|.+++..++|.+.+..+++..|.+.+++.++.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 66677788889999999999999999883 3347888889999999999999999999999999999999998887777
Q ss_pred HHHHHHhcCCCCCCCCCCc----hhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHH-HHHHHHHHHHHH
Q 009978 269 VLVWLSATSSTPDRHPQIS----KYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIV-ANAMHSWGFFVI 343 (521)
Q Consensus 269 ~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~ 343 (521)
.+..++..+|+++...... +++.+... ...++....+++.++.|.+|...+ ..++.......-
T Consensus 168 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 235 (433)
T PF03092_consen 168 LIVALFLLEERKVRPADEVFSFGKEEVPCLF------------GSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSIS 235 (433)
T ss_pred HHHHHHhhhhccccccchhhcccccccchhh------------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCC
Confidence 6666666665322211100 00000000 001122345667777888887666 333222221111
Q ss_pred HHHHHHHHHHHhC---CCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhcc-
Q 009978 344 LSWMPIYFNFVYH---IDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA- 419 (521)
Q Consensus 344 ~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 419 (521)
....-.+..+..+ +++...+.+..+..++.++|..+..+...+..- |+.+....++.....+.-+...
T Consensus 236 ~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~--------R~~~~~t~~~~~~~~l~~~~lv~ 307 (433)
T PF03092_consen 236 SASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSW--------RRIFVVTTLVSVLASLFDLLLVT 307 (433)
T ss_pred CccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH--------HHHHHHHHHHHHHHhcccEEEEE
Confidence 0100011122234 666666666555444445444444333322222 2233222222222222111111
Q ss_pred --------chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc-chhhHHhHHHHHHHHHHHHHHHHHHHHhhcccc----
Q 009978 420 --------KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGISNTAGTFAAILGTVGAGFFVELVGS---- 486 (521)
Q Consensus 420 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~---- 486 (521)
++.+..+.--++.-...............+..|+ ..|+.+++..++.++|..++..++..+.+..|.
T Consensus 308 ~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~ 387 (433)
T PF03092_consen 308 RWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDD 387 (433)
T ss_pred EEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 1112112222233333444444455556666664 899999999999999999999999999887652
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhccCcc
Q 009978 487 ---FQGFLLLTSLLYFLSALFYIIFSTGER 513 (521)
Q Consensus 487 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (521)
.....+++.++.++...+..+++++++
T Consensus 388 f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 388 FSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 345555666666555555555555443
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=1e-14 Score=144.14 Aligned_cols=161 Identities=14% Similarity=0.084 Sum_probs=134.0
Q ss_pred hhhhhhhhhhhcCCc--------chhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccc--cc
Q 009978 119 SVAIVPLSLAHGWSR--------SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD--TS 188 (521)
Q Consensus 119 ~~~~~~~~~~~~~s~--------~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~--~~ 188 (521)
....+.+.++.|.++ ++.+...++..++..++.++.|+++||+|+|+++.++.++.+++..+...... .+
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344465666666543 66799999999999999999999999999999999999998888766655311 12
Q ss_pred hHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHH-hhhhhhhHHHHHHHHHhhhc------cCchhHHHHH
Q 009978 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQ------AGIFGPFVIF 261 (521)
Q Consensus 189 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~------~gw~~~f~~~ 261 (521)
++.+++.+++.|++.+...+....++.|++|+++|++++|+.+ ...++|..+||+++|++.+. +||+..|++.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 4567788999999999888898999999999999999999997 67889999999999999987 4699999999
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 009978 262 GLSGFLWVLVWLSATSST 279 (521)
Q Consensus 262 ~~~~~i~~i~~~~~~~~~ 279 (521)
+++.++..++.+++.+|+
T Consensus 388 ~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 388 AGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 888888777777777655
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.63 E-value=3.2e-15 Score=124.12 Aligned_cols=136 Identities=21% Similarity=0.368 Sum_probs=122.4
Q ss_pred HHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCC
Q 009978 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (521)
Q Consensus 140 ~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 219 (521)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+. ++++.+.+.+++.|++.+...+...+++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 445678888999999999999999999999999999888888887 889999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcC
Q 009978 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATS 277 (521)
Q Consensus 220 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~ 277 (521)
+++|++.+++.+....+|..+++.+.+.+.+..+|++.+++.++..++..+...+..|
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999899999999988887776666655544
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.61 E-value=8.2e-14 Score=137.66 Aligned_cols=159 Identities=18% Similarity=0.179 Sum_probs=132.9
Q ss_pred hhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHH
Q 009978 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (521)
Q Consensus 118 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~ 197 (521)
.....+.+.++.+. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+. ++.+.+++..+
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 310 (399)
T PRK05122 235 IATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA--PSPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHH
Confidence 33444555555565 345677788889999999999999999999999999988888888777777 78888888899
Q ss_pred HHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcC
Q 009978 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATS 277 (521)
Q Consensus 198 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~ 277 (521)
+.|++.+...+.....+.|.+|+++|+++.++++....+|..+++++.+.+.+..||++.|++.+++.++..+..+...+
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999998888888888899999999999999999999999999999999999999999999998888777666665544
Q ss_pred CCC
Q 009978 278 STP 280 (521)
Q Consensus 278 ~~~ 280 (521)
+++
T Consensus 391 ~~~ 393 (399)
T PRK05122 391 RAP 393 (399)
T ss_pred ccc
Confidence 443
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.60 E-value=2.1e-14 Score=140.62 Aligned_cols=151 Identities=15% Similarity=0.078 Sum_probs=128.4
Q ss_pred hhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHH
Q 009978 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (521)
Q Consensus 118 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~ 197 (521)
.....+.+.++++.++.+.+++.+...++..++.++.|++.||+|||+.+.++.++..++.++..+....+...++...+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 224 LIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 33445556788899999999999999999999999999999999999999999988888887776662112333456677
Q ss_pred HHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHH
Q 009978 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (521)
Q Consensus 198 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~ 268 (521)
+.|++.+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 88888888777888899999999999999999999999999999999999999999999999988776654
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.59 E-value=2.3e-14 Score=142.41 Aligned_cols=150 Identities=13% Similarity=0.097 Sum_probs=129.8
Q ss_pred hhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchh
Q 009978 128 AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVAL 207 (521)
Q Consensus 128 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~ 207 (521)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.++. ++.+.+++.+++.|++.+...
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~--~~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA--TGPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHH
Confidence 346677788999999999999999999999999999999999999988888888887 888989999999999988888
Q ss_pred hHHHHHHHhcCCchhhHHHHHH-HHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 208 PAMNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (521)
Q Consensus 208 ~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~ 279 (521)
+....++.+.+|++.|+...+. ++....+|.++++.+.|++.+.+||+..|++.+++.++..++.+...+++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8888999999999888877655 67778899999999999999999999999998888777666555554443
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=1.7e-13 Score=135.70 Aligned_cols=157 Identities=19% Similarity=0.133 Sum_probs=129.9
Q ss_pred hhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009978 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (521)
Q Consensus 117 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 196 (521)
......|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.+..+++.++..+. ++.+.+.+..
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 315 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA--PSFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc--CcHHHHHHHH
Confidence 34445677888899999999999999999999999999999999999999888777777776666666 6777777788
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-chhHHHHHHHHHHHHHHHHHHh
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-w~~~f~~~~~~~~i~~i~~~~~ 275 (521)
++.|++.+...+...+++.|.+|+++|+++.|+.+....+|..+||.+++.+.+..+ |...+++.+...++..+..+..
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 888988877888899999999999999999999999999999999999999988654 5556666655555544444444
No 129
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.56 E-value=3.5e-11 Score=114.10 Aligned_cols=343 Identities=13% Similarity=0.075 Sum_probs=227.5
Q ss_pred hhhhhhhhhh-hcCCcchhh-HHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009978 119 SVAIVPLSLA-HGWSRSFSG-IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (521)
Q Consensus 119 ~~~~~~~~~~-~~~s~~~~g-~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 196 (521)
+...|.+.+. .|++..|+. -+.-...-.+...-++...+.|..|.|++++++.+...+...++.+. ++.+.+-+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~--~sv~~mq~~q 101 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG--TSVLAMQLMQ 101 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--CcHHHHHHHH
Confidence 3445555554 788888875 45556666677788889999999999999999999999998888888 9999999999
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc--CchhHHHHHHHHHHHHHHHHHH
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWLS 274 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--gw~~~f~~~~~~~~i~~i~~~~ 274 (521)
++.|++.+. ..+..+++-...|+++-.++.+...+..-+|..++.++|..+...- +.+....+......+.++..++
T Consensus 102 ~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 102 FFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred HHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999776 7788899999999999999999999999999999999999887743 3444544444433444444444
Q ss_pred hcCCCCCCC---CCCch-h-----HHHHHHHhhccccccCCCCC--CC-------CCCchHHHHHhcchHHHHHHHHHHH
Q 009978 275 ATSSTPDRH---PQISK-Y-----ELEYILREKQKPLLMGNKHK--PA-------TVIPPFRRLLSKMPTWSIIVANAMH 336 (521)
Q Consensus 275 ~~~~~~~~~---~~~~~-~-----~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~l~~~~~ 336 (521)
+ |..++.. +.... . +.+...+..++.....+++. +. ...+.+++..++|.++...+-+.+.
T Consensus 181 L-P~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~a 259 (412)
T PF01770_consen 181 L-PMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFA 259 (412)
T ss_pred c-CCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 3 4333221 11000 0 00000000000000000000 00 1123456667889999999999998
Q ss_pred HHHHHHHHHHHHHHHHHH--hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHH
Q 009978 337 SWGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (521)
..++..+..+......+. .+-+...-|.+-+...+.+.++.+..|++..++.+. ....+....++.+..++
T Consensus 260 tcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~ 332 (412)
T PF01770_consen 260 TCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLF 332 (412)
T ss_pred HhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHH
Confidence 889998888888888774 123334467777778888888888888885555554 23444555556666677
Q ss_pred HHhccchhHHHHHHHHHHHHHHhhhhhhh-HHHHHhhhccchhhHHhHHHHHHHHHHHH
Q 009978 415 GLTAAKSPVMASAWLTLAIGMKSFSHSGF-LVNLQEIAPQYSGVLHGISNTAGTFAAIL 472 (521)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 472 (521)
.+...++.+...+..++..+...+..+.. .-+...+..+..|-++|+.+++..+-..+
T Consensus 333 lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 333 LMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 77777788877776666555544443333 33334444467788888877665544443
No 130
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.56 E-value=3.2e-13 Score=132.89 Aligned_cols=155 Identities=11% Similarity=0.008 Sum_probs=126.2
Q ss_pred hhhhhhhh-hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009978 118 MSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (521)
Q Consensus 118 ~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 196 (521)
+....|.+ .+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+......+. ++.+.+++.+
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~ 312 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA--HSPAILLGLQ 312 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHH
Confidence 33445544 46789999999999888888888899999999999999998887766665555444455 6777788889
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~ 275 (521)
++.+++.+...+....+..|.+| ++|+++.++++...++|..+|+.+++.+.+.+||+..|++.+++.++..+..+..
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 98888877777777788899987 4699999999999999999999999999999999999998887777766555543
No 131
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.56 E-value=3.3e-13 Score=132.32 Aligned_cols=155 Identities=12% Similarity=0.023 Sum_probs=135.7
Q ss_pred hhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHH
Q 009978 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (521)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 192 (521)
.....+....|.+.+++|.++.++|++.+...++..+..++.|++.||+|+|+.+.++.++..+..++.++. ++.+.+
T Consensus 219 ~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~ 296 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI--EAFPLI 296 (382)
T ss_pred HHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH--hhHHHH
Confidence 333344456666777899999999999999999999999999999999999999999999999999998888 899999
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHH-hhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q 009978 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (521)
Q Consensus 193 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~ 271 (521)
++.+++.|+..+...+....++.+. |+++|++..++++ ...++|..+|+.++|++.+++|+ ..|++.++++++..++
T Consensus 297 ~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 297 FLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 8899999999986 57789999999999999999986 6677777777655433
No 132
>PRK12382 putative transporter; Provisional
Probab=99.55 E-value=4.1e-13 Score=132.31 Aligned_cols=154 Identities=18% Similarity=0.226 Sum_probs=131.0
Q ss_pred hhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHH
Q 009978 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (521)
Q Consensus 118 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~ 197 (521)
.....|.+.++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+. ++.+.+++..+
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 310 (392)
T PRK12382 235 IGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA--PTAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc--ccHHHHHHHHH
Confidence 344455555666654 35666777888889999999999999999999999998888888877777 78888888999
Q ss_pred HHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 009978 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 198 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~ 275 (521)
+.|++.+...+...+.+.+.+|+++|++++|+++....+|..+||.+.+++.+..||+..|.+.+++.++..++.+..
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 999999888888888999999999999999999999999999999999999999999999999998877766665544
No 133
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.55 E-value=9.4e-13 Score=133.35 Aligned_cols=169 Identities=12% Similarity=0.118 Sum_probs=124.0
Q ss_pred hhhhhhhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh-hhhccccchH
Q 009978 113 ADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL-TPWAADTSLL 190 (521)
Q Consensus 113 ~~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l-~~~~~~~~~~ 190 (521)
...+......|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+++.++.++..++.+. ......++..
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 33444555667665 567998888888888889999999999999999999999988877654433322 2221114577
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-CchhHHHHHHHHHHHHH
Q 009978 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWV 269 (521)
Q Consensus 191 ~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gw~~~f~~~~~~~~i~~ 269 (521)
.+++++++.|++.+........++.+.+|++.|+.++++......++..++|.+.+++.+.. +|+.++++..+.+++.+
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 78888999998877777778888999999999999999755445566788999999888754 47777776666666555
Q ss_pred HHHHHhcCCCCCC
Q 009978 270 LVWLSATSSTPDR 282 (521)
Q Consensus 270 i~~~~~~~~~~~~ 282 (521)
+..++ .||+|+.
T Consensus 424 ~~~~~-~pes~~~ 435 (490)
T PRK10642 424 ITGVT-MKETANR 435 (490)
T ss_pred HHHHH-hccccCC
Confidence 54444 4777654
No 134
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.54 E-value=4.7e-13 Score=138.68 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhc
Q 009978 138 IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARW 217 (521)
Q Consensus 138 ~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 217 (521)
+...+..++.+++.++.|+++||+|||++++++.++.+++.++.++. ++...+++.+++.|++.+..++...++++|+
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~--~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG--NSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556778899999999999999999999999999999999888887 7777888888898988888889999999999
Q ss_pred CCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 218 FPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (521)
Q Consensus 218 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~ 279 (521)
+|.++|++++|+......+|.++||++++.+... +...+|++.+++.++.+++.+++ ||+
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L-PET 736 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL-PDT 736 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC-CCC
Confidence 9999999999999999999999999999988764 45677877777776665555544 554
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.54 E-value=1.5e-13 Score=136.20 Aligned_cols=158 Identities=17% Similarity=0.151 Sum_probs=131.2
Q ss_pred hhhhhhhhhhhhhcCCcc----hhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHH
Q 009978 117 VMSVAIVPLSLAHGWSRS----FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (521)
Q Consensus 117 ~~~~~~~~~~~~~~~s~~----~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 192 (521)
...+..+.+.++.+.+.. ..+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+. ++.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 314 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV--QTPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh--ccHHHH
Confidence 344455555555433333 24566667788888999999999999999999999988888777777766 778888
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHH
Q 009978 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVW 272 (521)
Q Consensus 193 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~ 272 (521)
++.+++.|++.+...+...+.+.+..|+++|++.+++++....+|..+||.+++.+.+..||+..|++.+++.++..+..
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998888776666
Q ss_pred HHhc
Q 009978 273 LSAT 276 (521)
Q Consensus 273 ~~~~ 276 (521)
++..
T Consensus 395 ~~~~ 398 (408)
T PRK09874 395 WNSL 398 (408)
T ss_pred HHHH
Confidence 5543
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.54 E-value=3.2e-13 Score=134.21 Aligned_cols=161 Identities=14% Similarity=0.064 Sum_probs=137.7
Q ss_pred hhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009978 118 MSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (521)
Q Consensus 118 ~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 196 (521)
+....|.+.++ +|.++.+.|++.+...++..++.++.|++.||.++++.+..+.++.+++.++..+. ++.+.+.++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM--PMWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc--chHHHHHHHH
Confidence 34456767666 89999999999999999999999999999999888888888888888887777776 7777778888
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~ 276 (521)
++.|++.+...+...+++.+..|++.|++++|++.....+|..+|+.+.|++.+.+|++..++..+++.++..++.....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 99999988877888899999999999999999999999999999999999999999999999888877766666555555
Q ss_pred CCCC
Q 009978 277 SSTP 280 (521)
Q Consensus 277 ~~~~ 280 (521)
++.+
T Consensus 400 ~~~~ 403 (417)
T PRK10489 400 GELR 403 (417)
T ss_pred cccc
Confidence 5443
No 137
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=4.3e-13 Score=130.00 Aligned_cols=164 Identities=25% Similarity=0.329 Sum_probs=145.8
Q ss_pred HHHHhhhhhhhhhhhhhhhhhh-cCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchH-HHHHHHHHHHHHHhhhhhcc
Q 009978 108 LALCNADRVVMSVAIVPLSLAH-GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWSLATFLTPWAA 185 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~-~~~~~~~~~~~~~~l~~~~~ 185 (521)
.+.............|.+.++. |.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+.....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 262 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA- 262 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-
Confidence 3344444555566677776665 999999999999999999999999999999999999 9999999999999888887
Q ss_pred ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHH
Q 009978 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSG 265 (521)
Q Consensus 186 ~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~ 265 (521)
++.+.+++..++.|++.+...+...+++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|+..+++.+++.
T Consensus 263 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~ 341 (352)
T cd06174 263 -PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALA 341 (352)
T ss_pred -ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHH
Confidence 7888899999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHH
Q 009978 266 FLWVLVWL 273 (521)
Q Consensus 266 ~i~~i~~~ 273 (521)
++..+...
T Consensus 342 ~i~~i~~~ 349 (352)
T cd06174 342 LLAALLLL 349 (352)
T ss_pred HHHHHHhe
Confidence 77666543
No 138
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.52 E-value=4.3e-13 Score=135.12 Aligned_cols=174 Identities=17% Similarity=0.078 Sum_probs=127.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhh-hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh
Q 009978 102 SMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l 180 (521)
..+++..++............|.+ .+++|.+..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~ 340 (467)
T PRK09556 261 WLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTL 340 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH
Confidence 334444444444444455566755 4668999999999999999999999999999999999998776655444433322
Q ss_pred hhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhh-hhHHHHHHHHHhhh---------
Q 009978 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMS--------- 250 (521)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~l~~~l~~--------- 250 (521)
..+...++.+.+.+.+++.|++.............|.+|+++|+.+.|+.+...++ |..++|.+.|++.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~ 420 (467)
T PRK09556 341 GVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIF 420 (467)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccc
Confidence 22221156666677888888654443334446777999999999999999988886 77999999999999
Q ss_pred ---ccCchhHHHHHHHHHHHHHHHHHHh
Q 009978 251 ---QAGIFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 251 ---~~gw~~~f~~~~~~~~i~~i~~~~~ 275 (521)
..||+..|++.+++.++..+..+.+
T Consensus 421 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 421 GYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999877777765554433
No 139
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.52 E-value=8.5e-13 Score=129.32 Aligned_cols=151 Identities=13% Similarity=0.048 Sum_probs=126.2
Q ss_pred hhhh-hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHH
Q 009978 121 AIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (521)
Q Consensus 121 ~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~ 199 (521)
..|. +.+++|.++.+.+++.+.......++.++.|++.||+|||+++.++.++..+...+..+. ++.+.+++.+++.
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 298 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD--NSLWALLMLQLLN 298 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 3444 456789999999999888877788889999999999999999888877766665555555 6788888889999
Q ss_pred hhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHH
Q 009978 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (521)
Q Consensus 200 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~ 274 (521)
|++.+...+....++.|..|+ ++++++++++....+|..++|.+++.+.+..||+..|++.+++.++..+...+
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 999888888888999999875 56799999999999999999999999999999999999988887776655443
No 140
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.52 E-value=1.4e-12 Score=127.84 Aligned_cols=150 Identities=15% Similarity=0.167 Sum_probs=124.6
Q ss_pred hhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHH
Q 009978 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (521)
Q Consensus 120 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~ 199 (521)
..+|.+.++.|.++.+.|++.+...++..+++++.|++.||+|+|+++..+..+..++.+... . ........++.
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~----~-~~~~~~~~~l~ 295 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML----S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh----h-hHHHHHHHHHH
Confidence 446777778899999999999999999999999999999999999999888888777665432 1 12334566777
Q ss_pred hhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHH
Q 009978 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (521)
Q Consensus 200 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~ 274 (521)
|++.....|...+++.|..|+++++...+.+....++|..+||.++|++.+++||++.|++.+.+.++..+..++
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 877777789999999999988888888888888999999999999999999999999999988887766554444
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.51 E-value=1.5e-12 Score=128.11 Aligned_cols=152 Identities=17% Similarity=0.100 Sum_probs=124.4
Q ss_pred hhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh-hhhhccccchHHHHHHHHHHh
Q 009978 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LTPWAADTSLLALLAMRAVVG 200 (521)
Q Consensus 122 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~-l~~~~~~~~~~~l~~~r~l~G 200 (521)
.|.+.+++|.+..+.+++.+...++..++.++.|++.||+|+|+.. .+..+..++.. +.... ++.+.+++..++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA--NSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh--chHHHHHHHHHHHH
Confidence 3445556899999999999999999999999999999999988754 44444444433 33444 67788888889999
Q ss_pred hhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcC
Q 009978 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATS 277 (521)
Q Consensus 201 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~ 277 (521)
++.+...+...+.+.+..| ++|++++|+++....+|..+||+++|.+.+.+|++..|++.+.+.++..+..+...+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9987777778888888876 688999999999999999999999999999999999999999888877776666554
No 142
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.50 E-value=4.5e-13 Score=134.17 Aligned_cols=157 Identities=13% Similarity=0.044 Sum_probs=126.9
Q ss_pred hhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh--cchHHHHH--HHHHHHHHHhhhhhcccc
Q 009978 112 NADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIMAW--GVALWSLATFLTPWAADT 187 (521)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~--Grr~~~~~--~~~~~~~~~~l~~~~~~~ 187 (521)
..........+|.+.+++|.+..+.+++.++..++..++.++.|++.||. ++|+...+ +.++.+++.+++.+. +
T Consensus 254 ~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~--~ 331 (455)
T TIGR00892 254 FLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA--G 331 (455)
T ss_pred HHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh--c
Confidence 33333444556777788899999999999999999999999999999984 34443333 333334444555556 7
Q ss_pred chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-CchhHHHHHHHHHH
Q 009978 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGF 266 (521)
Q Consensus 188 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gw~~~f~~~~~~~~ 266 (521)
+++.+++.+++.|++.+...+...+++.|.+|++++++++++++...++|..+||.+++.+.+.. +|++.|++.+++.+
T Consensus 332 ~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~l 411 (455)
T TIGR00892 332 DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVV 411 (455)
T ss_pred hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHH
Confidence 88888999999999999989999999999999999999999999999999999999999999877 59999999888766
Q ss_pred HHHH
Q 009978 267 LWVL 270 (521)
Q Consensus 267 i~~i 270 (521)
+..+
T Consensus 412 i~~~ 415 (455)
T TIGR00892 412 SAGL 415 (455)
T ss_pred HHHH
Confidence 5544
No 143
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.50 E-value=1.3e-12 Score=128.82 Aligned_cols=166 Identities=18% Similarity=0.114 Sum_probs=120.2
Q ss_pred HHHHHHHhhhhhhhhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchH--HHH------HHHHHHH
Q 009978 105 ALALALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI--IMA------WGVALWS 175 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~--~~~------~~~~~~~ 175 (521)
.+..+.............|.+. +++|.++.+.+++.+...++..++.++.|++.||+|||+ ... .+.++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T TIGR00893 221 ALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLS 300 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Confidence 3334444444445555666554 568999999999999999999999999999999999996 111 1111111
Q ss_pred HHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-c
Q 009978 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-I 254 (521)
Q Consensus 176 ~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-w 254 (521)
+........ ++.+..+....+.+.+.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..| |
T Consensus 301 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~ 377 (399)
T TIGR00893 301 LLMFATNYV--NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSF 377 (399)
T ss_pred HHHHHhccc--hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCch
Confidence 111111112 344444444444445544 788999999999999999999999999999999999999999999888 9
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 009978 255 FGPFVIFGLSGFLWVLVWL 273 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~ 273 (521)
+..|++.+++.++..+..+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 378 AGALMVVAALALIGALSYL 396 (399)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 9999988887776655544
No 144
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.50 E-value=3e-12 Score=125.92 Aligned_cols=166 Identities=14% Similarity=0.099 Sum_probs=129.5
Q ss_pred hhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHH
Q 009978 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (521)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 192 (521)
..........|.+.+++|.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..+..++.++..... ++...+
T Consensus 219 ~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ 297 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP-LQLPVL 297 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc-chHHHH
Confidence 3333455566777777899999999999999999999999999999999999999888888777766554331 232222
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhcCC-chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-chhHHHHHHHHHHHHHH
Q 009978 193 LAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVL 270 (521)
Q Consensus 193 ~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-w~~~f~~~~~~~~i~~i 270 (521)
. -++.|++.+...+.......+..+ ++++++.+++.+....++..++|.+.+++.+..| |...|++.++.+++..+
T Consensus 298 ~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 298 W--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred H--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 2 245688888778877777777775 5789999999999999999999999999999876 78888888777777666
Q ss_pred HHHHhcCCCCC
Q 009978 271 VWLSATSSTPD 281 (521)
Q Consensus 271 ~~~~~~~~~~~ 281 (521)
......||+++
T Consensus 376 ~~~~~~~~~~~ 386 (393)
T PRK09705 376 ITLRFAPARFP 386 (393)
T ss_pred HHHHhcccccc
Confidence 66666665543
No 145
>PRK10054 putative transporter; Provisional
Probab=99.49 E-value=2.6e-12 Score=126.34 Aligned_cols=172 Identities=11% Similarity=0.119 Sum_probs=126.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHH
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (521)
|.++.+.+..++...+......++|.|+++.+|++..+.++..+...++..+++++.|+++||+++|+ .+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~---------~~~ 77 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR---------YML 77 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch---------hHH
Confidence 45677778888888888889999999998889999999999999999999999999999999999982 233
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh
Q 009978 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 482 (521)
.+....++..+.+...++.+..+....+.........+....+..+..| ++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 78 LAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444555444333322222223334444555555554 689999999999999999999999999886
Q ss_pred cccchHHHHHHHHHHHHHHHHHHH
Q 009978 483 LVGSFQGFLLLTSLLYFLSALFYI 506 (521)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~ 506 (521)
.| ++..|.+.+++.+++.++..
T Consensus 158 -~g-~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 158 -QS-INLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred -hc-cCcHHHHHHHHHHHHHHHHH
Confidence 45 88888888877776654443
No 146
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=6.3e-13 Score=135.38 Aligned_cols=150 Identities=12% Similarity=0.108 Sum_probs=117.7
Q ss_pred hhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009978 118 MSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (521)
Q Consensus 118 ~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 196 (521)
....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..++.......+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445677776 5889999999999999999999999999999999999999888877766665444333223444444555
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i 267 (521)
++.++......+...+++.|.+|+++|++++++......+|..+||.+++.+.+.+||+..+...+....+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 55444333445667788999999999999999999999999999999999999999999888666554433
No 147
>PRK03699 putative transporter; Provisional
Probab=99.48 E-value=1.7e-12 Score=127.96 Aligned_cols=163 Identities=12% Similarity=0.089 Sum_probs=130.9
Q ss_pred HHHhhhhhhhhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhcccc
Q 009978 109 ALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT 187 (521)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~ 187 (521)
++.......+....|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+++|+.+.....+.++...+.... +
T Consensus 215 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~--~ 292 (394)
T PRK03699 215 LLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT--D 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc--C
Confidence 333333344555667666 5689999999999999999999999999999999999999888877777766666555 6
Q ss_pred chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 009978 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (521)
Q Consensus 188 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i 267 (521)
+.+.+.+..++.|++.+...+...++..+..| +++++..+.......+|..++|.+.+++.+..||+..+++.+++.++
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~ 371 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAV 371 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHH
Confidence 77777777888898888778888888888775 45677888888899999999999999999999999999988887776
Q ss_pred HHHHHHH
Q 009978 268 WVLVWLS 274 (521)
Q Consensus 268 ~~i~~~~ 274 (521)
..+....
T Consensus 372 ~~~~~~~ 378 (394)
T PRK03699 372 VFVMCIL 378 (394)
T ss_pred HHHHHHH
Confidence 6554433
No 148
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.46 E-value=7.3e-13 Score=130.60 Aligned_cols=161 Identities=12% Similarity=0.085 Sum_probs=122.9
Q ss_pred HHHHHHhhhhhhhhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHH-h-hhh
Q 009978 106 LALALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT-F-LTP 182 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~-~-l~~ 182 (521)
...+.............|.+. +++|.++.+.+.+.+...++..++.++.|++.||+|||+.+.....+..+.. . +..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 226 GLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445555666665 6789999999999999999999999999999999999998775554443332 1 222
Q ss_pred hccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHH-HHhhhhhhhHHHHHHHHHhhhccC-chhHHHH
Q 009978 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAG-IFGPFVI 260 (521)
Q Consensus 183 ~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~l~~~l~~~~g-w~~~f~~ 260 (521)
+...++.+.+++..++.|++.+...+...+++.|.+|+++|++++++ .+....+|..++|.+++++.+..| |+..++.
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 306 LLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 22124666777778889998888889999999999999999999998 456667899999999999999888 8887777
Q ss_pred HHHHHH
Q 009978 261 FGLSGF 266 (521)
Q Consensus 261 ~~~~~~ 266 (521)
..+..+
T Consensus 386 ~~~~~l 391 (394)
T TIGR00883 386 LAALAL 391 (394)
T ss_pred HHHHHH
Confidence 665543
No 149
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.46 E-value=4.7e-12 Score=126.33 Aligned_cols=171 Identities=13% Similarity=-0.049 Sum_probs=116.2
Q ss_pred HHHHhhhhhhhhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh--cch-HHHHHHHHHHHHHHhhhhh
Q 009978 108 LALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGK-IIMAWGVALWSLATFLTPW 183 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~--Grr-~~~~~~~~~~~~~~~l~~~ 183 (521)
.+........+....|.+. +++|.+..+.+...+.+.++..++.++.|+++||+ ++| +......+...+.......
T Consensus 252 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~ 331 (434)
T PRK11663 252 YVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL 331 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH
Confidence 3333333444455566665 66899999999999999999999999999999999 333 3222211111111111111
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
....+...+.+..+..|++...........+.|.+|+++|+.+.|+.+....+|..++|.+.+++.+..||+..|++.++
T Consensus 332 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~ 411 (434)
T PRK11663 332 MPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISI 411 (434)
T ss_pred cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHH
Confidence 11133333334444445443322333445678999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhcCC
Q 009978 264 SGFLWVLVWLSATSS 278 (521)
Q Consensus 264 ~~~i~~i~~~~~~~~ 278 (521)
++++..+..+...++
T Consensus 412 ~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 412 AAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHhh
Confidence 887776666554433
No 150
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.46 E-value=4.4e-12 Score=125.24 Aligned_cols=165 Identities=13% Similarity=0.105 Sum_probs=125.4
Q ss_pred HHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHH-HHHHHHHHHHhhhhhc---
Q 009978 109 ALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA-WGVALWSLATFLTPWA--- 184 (521)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~-~~~~~~~~~~~l~~~~--- 184 (521)
++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+.+.
T Consensus 232 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~ 311 (402)
T TIGR00897 232 IINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH 311 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333333444555678888889999999999999999999999999999999999988764 3333333333332221
Q ss_pred cccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHH
Q 009978 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (521)
Q Consensus 185 ~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~ 264 (521)
..++.+.+++..++.|++.+...+ ....+.+..| ++|++++|+.+....+|..++|.+++.+.+..||+..+++.+++
T Consensus 312 ~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 312 FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 114567777788888988876544 4556677654 68999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHh
Q 009978 265 GFLWVLVWLSA 275 (521)
Q Consensus 265 ~~i~~i~~~~~ 275 (521)
.++..++..+.
T Consensus 390 ~~i~~~~~~~~ 400 (402)
T TIGR00897 390 YVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHh
Confidence 77766655543
No 151
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.45 E-value=8.2e-12 Score=122.48 Aligned_cols=149 Identities=19% Similarity=0.071 Sum_probs=125.1
Q ss_pred hhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHH
Q 009978 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (521)
Q Consensus 118 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~ 197 (521)
.....|.+.++.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+.. ++.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST--TALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHH
Confidence 3334455667799999999999999999999999999999999999999999999988888877777 88898999999
Q ss_pred HHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHH-hhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHH
Q 009978 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (521)
Q Consensus 198 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i 270 (521)
+.|++.+...+....++.+. +++++++..+.++ ...++|..+||.++|.+.+.+|+ ..|+..+++.++.++
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 99999998889999998887 5667788899886 55678889999999999999887 466666666554433
No 152
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.45 E-value=3.1e-12 Score=129.64 Aligned_cols=181 Identities=17% Similarity=0.114 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 178 (521)
..+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33333444444444444455566788888899999888999999999999999999999999999999999888877776
Q ss_pred hhhhh---cccc------chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhh
Q 009978 179 FLTPW---AADT------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (521)
Q Consensus 179 ~l~~~---~~~~------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 249 (521)
++.++ ...+ +...+....++.+.......+....++.|.+|+++|++++++.+...++|.+++|.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66552 1112 22233333333332222334666778899999999999999999999999999999999999
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (521)
Q Consensus 250 ~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~ 279 (521)
+..+|++.|++.++++++..++.++..||.
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHheecccC
Confidence 989999999999888887777666655544
No 153
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.44 E-value=3.8e-12 Score=127.68 Aligned_cols=164 Identities=12% Similarity=-0.001 Sum_probs=113.7
Q ss_pred hhhhhhhhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh--cchHHH-HHHHHHHHHHHhhhhhcccc
Q 009978 112 NADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIM-AWGVALWSLATFLTPWAADT 187 (521)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~--Grr~~~-~~~~~~~~~~~~l~~~~~~~ 187 (521)
....+.....+|.+.++ .|.+..+.+++.+.+.++..++.++.|+++||+ |||+.. .....+..++.++..+....
T Consensus 266 ~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~ 345 (452)
T PRK11273 266 YLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAG 345 (452)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhccc
Confidence 33334455567776655 789999999999999999999999999999999 555432 22223333333332222113
Q ss_pred chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhH-HHHHHHHHhhhccCchhHHHHHHHHHH
Q 009978 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA-IGLVLSPILMSQAGIFGPFVIFGLSGF 266 (521)
Q Consensus 188 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~gw~~~f~~~~~~~~ 266 (521)
+.+..++..++.|.+..........+..|.+|+++|+++.|+.+....+|.. ++|.+.+.+.+..||+..|++.++.++
T Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~ 425 (452)
T PRK11273 346 NPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSI 425 (452)
T ss_pred ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHH
Confidence 4444445555555543333333445678999999999999999988888765 489999999999999999998888777
Q ss_pred HHHHHHHHh
Q 009978 267 LWVLVWLSA 275 (521)
Q Consensus 267 i~~i~~~~~ 275 (521)
+.++.....
T Consensus 426 ~~~~~~~~~ 434 (452)
T PRK11273 426 LAVILLIVV 434 (452)
T ss_pred HHHHHHHHH
Confidence 765555443
No 154
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.44 E-value=1.2e-10 Score=117.65 Aligned_cols=155 Identities=14% Similarity=0.060 Sum_probs=121.4
Q ss_pred hhhhhhhhhcCCcchhhHHHH-HHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhh---hhccccchHHHHHHH
Q 009978 121 AIVPLSLAHGWSRSFSGIVQS-SFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMR 196 (521)
Q Consensus 121 ~~~~~~~~~~~s~~~~g~~~s-~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~---~~~~~~~~~~l~~~r 196 (521)
..|.+.+++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.+++ +.. .++.+.+.+.-
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~-~~~~~~l~~~~ 323 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT-DKNLYSMGAAV 323 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHH
Confidence 344556678999999999974 6678999999999999999999998777666555544322 222 13555555566
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~ 276 (521)
++..++.|...+...++..+..+++.+++..++.+...++|..+++.+.|++.+..||+..|.+.++++++..+......
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666777888999999999999999999999999999999999999999999999998888887766665553
No 155
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.44 E-value=5.9e-09 Score=102.21 Aligned_cols=275 Identities=11% Similarity=-0.030 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcC-----CcchhhHHHHHHHHHHHHh-hhhhHHHHhHhcchHHHHHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGW-----SRSFSGIVQSSFLWGYLVS-PIAGGTLVDYYGGKIIMAWGVA 172 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----s~~~~g~~~s~~~~~~~i~-~~~~G~l~dr~Grr~~~~~~~~ 172 (521)
+.+....+..++..+..+. +-++.+.+.+ +.+.+.++-+...+...+. .++.+++++|++|++++-+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 3444445555544444333 3344555544 4467889988887777666 8889999999999999887776
Q ss_pred HHHHHHhhhhhcccc-----------------------------chHHHHHHHHHHhhhhcchhh-HHHHHHHhcCCchh
Q 009978 173 LWSLATFLTPWAADT-----------------------------SLLALLAMRAVVGLAEGVALP-AMNNMVARWFPQTE 222 (521)
Q Consensus 173 ~~~~~~~l~~~~~~~-----------------------------~~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~ 222 (521)
.+....+++++...+ +.|...+..+...+-...... ...++++|.++.++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 666665555443100 123333334444444444444 77899999999999
Q ss_pred hHHHHHHHHhhhhhhhHHHHHHHHHhhhc-------c-Cch----hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhH
Q 009978 223 RARAVAIAMGGFTSGNAIGLVLSPILMSQ-------A-GIF----GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYE 290 (521)
Q Consensus 223 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------~-gw~----~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~ 290 (521)
-.|.+++...+.++|.++++.+..++.+. . .|. ..+.+.++..++...+...+.+.. ..++...+.+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~ 241 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV-LTDPRSYNPA 241 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCccccchh
Confidence 99999999999999999999998888631 1 242 233333333333333333332222 1111110111
Q ss_pred HHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc----chhHh
Q 009978 291 LEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFS 366 (521)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~ 366 (521)
. ..++++++....++++.++++|.++.+.+...++....+.+..-.-..+++.+ -++.+ .|.+.
T Consensus 242 ~-----------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~~ 309 (472)
T TIGR00769 242 L-----------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDFS 309 (472)
T ss_pred h-----------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH
Confidence 0 00122234455678899999999999888888888777777665556666644 23332 33444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Q 009978 367 AVPWSVMAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 367 ~~~~~~~~i~~~~~g~l~dr~~~~ 390 (521)
...++..++..++.+++.+|+|-+
T Consensus 310 ~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 310 TWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHH
Confidence 455555656666678899988877
No 156
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.43 E-value=1.9e-11 Score=116.81 Aligned_cols=183 Identities=10% Similarity=0.077 Sum_probs=143.1
Q ss_pred hHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 009978 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVT 395 (521)
Q Consensus 316 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~ 395 (521)
...+++.++....+.+...+...+...+.+++--++++ .+..+...|........+.++.-++.+++.+|+|+.+
T Consensus 363 ~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~---- 437 (618)
T KOG3762|consen 363 DVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN---- 437 (618)
T ss_pred HHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc----
Confidence 34467788888877777777777777888888888888 6767777887777778888888899999999999873
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHH-HHHHHH
Q 009978 396 LTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGT-FAAILG 473 (521)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~-~g~~~~ 473 (521)
++.+++.+...-++.+....++|+.+..=++-....+..+....+++..+.| +.++++.++...... +|-.+|
T Consensus 438 -----v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~G 512 (618)
T KOG3762|consen 438 -----VMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLG 512 (618)
T ss_pred -----eeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchh
Confidence 4556666777777777778888887777677666667777777777776665 689999998877764 999999
Q ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 474 TVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 474 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
++++|.+.+.+| -...|..+++.+++.++++..+.
T Consensus 513 slIGG~~v~~fg-~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 513 SLIGGFVVERFG-ARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhhhhheeeh-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999998 67888888877777666655543
No 157
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.41 E-value=3.1e-12 Score=126.74 Aligned_cols=140 Identities=13% Similarity=0.080 Sum_probs=114.9
Q ss_pred hhhhh-hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh-hhhhccccchHHHHHHHH
Q 009978 120 VAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LTPWAADTSLLALLAMRA 197 (521)
Q Consensus 120 ~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~-l~~~~~~~~~~~l~~~r~ 197 (521)
...|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+ +.... ++.+.+.+..+
T Consensus 259 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 336 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG--ANVAVLGLGLF 336 (405)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC--CchHHHHHHHH
Confidence 33444 4457899999999999999999999999999999999999998888776533332 23333 56666777777
Q ss_pred HHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-chhHHHHH
Q 009978 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIF 261 (521)
Q Consensus 198 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-w~~~f~~~ 261 (521)
+.|+..+...+...+++.|.+|+++|++++|+.+....+|..++|++.+++.+..| |+..+...
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 337 FQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 77777777778888999999999999999999999999999999999999999988 87766553
No 158
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.41 E-value=1.7e-11 Score=123.16 Aligned_cols=175 Identities=10% Similarity=0.051 Sum_probs=130.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCcccchhHhHHHHHHHHHHHHHHHHHHHH-HHhcCCCcchhHHHH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKIL 401 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~ 401 (521)
.++.+.+..++..++++++..++|.|+++. +|++..+++.+.+...++..++.+++|+++|| +|+| ..
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~---------~~ 81 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK---------KT 81 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH---------HH
Confidence 455666677777889999999999999987 89999999999999999999999999999999 7988 33
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc----chhhHHhHHHHHHHHHHHHHHHHH
Q 009978 402 QSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ----YSGVLHGISNTAGTFAAILGTVGA 477 (521)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~g~~~~~~~~g~~~~~~~~ 477 (521)
+..+..+.++..+.+...++.+.......+.....+...+.......+..|+ +|+++.++.+...++|..+||.+.
T Consensus 82 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~ 161 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLA 161 (475)
T ss_pred HHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHH
Confidence 4444455555555555444444333333332233334445556666666652 388899999999999999999999
Q ss_pred HHHhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 478 GFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 478 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
|++.+..| |+..|.+.++..+++.+.++..+
T Consensus 162 g~l~~~~g-~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 162 GVIAENYG-YHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHhcC-hHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999887 99999888876666655554443
No 159
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=2e-11 Score=115.23 Aligned_cols=165 Identities=20% Similarity=0.198 Sum_probs=136.2
Q ss_pred HHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccc
Q 009978 109 ALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS 188 (521)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~ 188 (521)
+........++..-|.+.+..|.+.+.++++.-.+.++..+++.+.|++.|| +.|+.+.....+.++..+.+.+.. ++
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~-~~ 299 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG-AS 299 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc-ch
Confidence 3334444567778888888899999999999999999999999999999999 999998888777777776655542 55
Q ss_pred hHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHH
Q 009978 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (521)
Q Consensus 189 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~ 268 (521)
.+..++.-++.|++.+.........+++.. +|.++.+.+++....++|..+|..++|.+.+++|+....++.+++.++.
T Consensus 300 ~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a 378 (394)
T COG2814 300 PALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLA 378 (394)
T ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 666677777788887776666666677733 5889999999999999999999999999999999999999999988887
Q ss_pred HHHHHHhc
Q 009978 269 VLVWLSAT 276 (521)
Q Consensus 269 ~i~~~~~~ 276 (521)
.++.+...
T Consensus 379 ~~~~~~~~ 386 (394)
T COG2814 379 LLLALLSA 386 (394)
T ss_pred HHHHHHHH
Confidence 77665543
No 160
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.40 E-value=9.6e-12 Score=124.10 Aligned_cols=143 Identities=13% Similarity=0.080 Sum_probs=107.3
Q ss_pred hhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHH
Q 009978 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (521)
Q Consensus 118 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~ 197 (521)
+...+|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..++.++......++...+....+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 44456777777899999999999999999999999999999999999999888877766655444331122222222222
Q ss_pred HHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHH
Q 009978 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (521)
Q Consensus 198 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~ 260 (521)
..+++.....+....++.|.+|+++|++++|+......+|..++|.+.+++.+.+|+....++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 222222333455667889999999999999999999999999999999999998886654333
No 161
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=5.1e-12 Score=117.67 Aligned_cols=178 Identities=16% Similarity=0.133 Sum_probs=145.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (521)
.+....+.+..+++.-..+..-.|...++ .++|..+.|++.+.+.+...++.++.|.++||.+.| ..+..
T Consensus 30 if~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr---------~fm~~ 99 (448)
T COG2271 30 IFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR---------YFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc---------eeehH
Confidence 34445555555555555666666666666 789999999999999999999999999999999988 56778
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHH--HHHh
Q 009978 405 GFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGA--GFFV 481 (521)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~ 481 (521)
++++.++..+.+.+.++...+.++..+...+-+...|.....+..-.+ ++||+..++.++..++|+.+.|++. +++.
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 888888888888888888877777777777778888887777777766 6999999999999999999999999 8888
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHHhccCcc
Q 009978 482 ELVGSFQGFLLLTSLLYFLSALFYIIFSTGER 513 (521)
Q Consensus 482 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (521)
++.+ ++..|++.+++.++..++.+...|+++
T Consensus 180 ~~~~-w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 180 FHGG-WRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred hccc-hhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8875 999999999988877776666655544
No 162
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.40 E-value=3.4e-11 Score=118.63 Aligned_cols=169 Identities=14% Similarity=0.194 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHH
Q 009978 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (521)
Q Consensus 327 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (521)
+......++...+.+.+..+++.|+++..|++..+.|+..+...+...+.+++.|+++||+++| .++..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k---------~~l~~~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK---------PMIVTGM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch---------HHHHHHH
Confidence 4555777777888888899999999888999999999999999999999999999999999988 3334444
Q ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhh-ccchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 407 IAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
...++..+.....++.+......++.....+...+.......+.. +++++++.|+.....++|..+||.+.|.+. ..|
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 444444444444455554444333333333444455555556655 579999999999999999999999999998 455
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 009978 486 SFQGFLLLTSLLYFLSALFYI 506 (521)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~ 506 (521)
++..|++.++..++..++..
T Consensus 163 -~~~~f~~~~~~~~~~~i~~~ 182 (400)
T PRK11646 163 -FRLVCATGAVLFVLAAAFNA 182 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHHH
Confidence 88888888777666554433
No 163
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.39 E-value=2.8e-11 Score=118.02 Aligned_cols=170 Identities=12% Similarity=0.101 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
.+.+..++...+.......+|.|..+ .+.++.+.+++.+...++..++.++.|++.||+|||+ .+..+..
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~---------~~~~~~~ 72 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKK---------VMIGADL 72 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH---------HHHHHHH
Confidence 34566666667777777888888888 7899999999999999999999999999999999982 2222222
Q ss_pred HHHHHHHHHhccc-----hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHh
Q 009978 408 APGIALIGLTAAK-----SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (521)
Q Consensus 408 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 481 (521)
+..+......... +.+..++..++.....+...+....+..+..| ++|+++.|+.+....+|..++|.+.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222212 44444444444444455556666777777776 59999999999999999999999999999
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 482 ELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 482 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
+..| ++..|++.++..+++.+..+..
T Consensus 153 ~~~g-~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 153 ATLG-IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHhh-HHHHHHHHHHHHHHHHHHHHhc
Confidence 9887 8888888777666665554444
No 164
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.38 E-value=2.2e-11 Score=122.06 Aligned_cols=155 Identities=21% Similarity=0.208 Sum_probs=138.3
Q ss_pred hhhhhhhhhhh-hhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHH
Q 009978 117 VMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (521)
Q Consensus 117 ~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 195 (521)
.+...+|.+.+ ++|.++...|++.+++.+|..+++++.+++.+|+++++.+..+.++++++.+..++. ++.+..++.
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~--~~~~~~~~~ 313 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS--PSFWLALIA 313 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc--hHHHHHHHH
Confidence 34455777764 589999999999999999999999999999999999999999999999999988988 899999999
Q ss_pred HHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 009978 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (521)
Q Consensus 196 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~ 273 (521)
.++.|++........++.+.+..|++.|||+++++.+....+..+|..+.|.+.+.+|.+..+.+.++..++..++..
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888899999999999999999999999999999999999999999999999999888776555544443
No 165
>TIGR00895 2A0115 benzoate transport.
Probab=99.38 E-value=6.9e-12 Score=123.83 Aligned_cols=140 Identities=21% Similarity=0.212 Sum_probs=113.0
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccc
Q 009978 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (521)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~ 186 (521)
..++............|.+.+++|.++.+.++..+...++..++.++.|++.||+|+|+.+....+......++....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 335 (398)
T TIGR00895 258 LYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTL-- 335 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh--
Confidence 333334444455556778888899999999999999999999999999999999999955544444333333333324
Q ss_pred cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 187 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
.+.+.+++..++.|++.+...+...+++.|.+|+++|++++|+......+|..+||.++|++
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 336 FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 66777788889999999999999999999999999999999999999999999999999876
No 166
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.38 E-value=3.8e-11 Score=118.79 Aligned_cols=175 Identities=15% Similarity=0.185 Sum_probs=125.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHH-HhcCCCcchhHHHHH
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML-IQRGTSVTLTRKILQ 402 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-~~~~~~~~~~~~~~~ 402 (521)
+.++..+.......+.++++..++|.|+++.+|++..+++.+.........++.+++|+++||+ |+| ..+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr---------r~i 79 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR---------MAV 79 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH---------HHH
Confidence 4566667777777888999999999999988899999999999999999899999999999999 888 233
Q ss_pred HHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc---chhhHHhHHHHHHHHHHHHHHHHHH
Q 009978 403 SIGFIAPGIALIGLTAAK-SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ---YSGVLHGISNTAGTFAAILGTVGAG 478 (521)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g 478 (521)
.++.+...+..+.+.... ........+.+.....+...+....+..+..|+ +|.++.++.+...++|+.++|.+.|
T Consensus 80 liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 344444444333332221 112122222222222233334455667777763 6899999999999999999999999
Q ss_pred HHhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 479 FFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
++.+..| |+..|.++++..+++.+.++..
T Consensus 160 ~L~~~~G-w~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 160 YAQEEYS-WAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHHhhhC-hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999887 9999988877666666655543
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.37 E-value=1.8e-11 Score=120.72 Aligned_cols=142 Identities=13% Similarity=0.098 Sum_probs=121.1
Q ss_pred cCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhH
Q 009978 130 GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPA 209 (521)
Q Consensus 130 ~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~ 209 (521)
+.+..+.|.+.++..+...++.++.|++.||+|+|+.+.++.++.+++..+.... ++.+.+++.+++.|++.+.....
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA--TTALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHH
Confidence 5566778999999999999999999999999999999999999888888776777 88888888999999997776666
Q ss_pred HHHHHHhcCCchhhHHHHHH-HHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 009978 210 MNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (521)
Q Consensus 210 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~ 273 (521)
...++.+..+++.++...+. .+....+|..+++.++|++.+..||+..|++.+++.++..+...
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 77778888887777776665 67889999999999999999999999999999988777665543
No 168
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.37 E-value=4.4e-11 Score=121.28 Aligned_cols=164 Identities=18% Similarity=0.069 Sum_probs=123.6
Q ss_pred hhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccc-h-HHHHH
Q 009978 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS-L-LALLA 194 (521)
Q Consensus 117 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~-~-~~l~~ 194 (521)
......|.+.++.|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++++.....+ . .....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 344556888888999888778887788888999999999999999999999999999888877665431111 1 12233
Q ss_pred HHHHHhhhhcc-hhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh------hhccCchhHHHHHHHHHHH
Q 009978 195 MRAVVGLAEGV-ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL------MSQAGIFGPFVIFGLSGFL 267 (521)
Q Consensus 195 ~r~l~G~g~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l------~~~~gw~~~f~~~~~~~~i 267 (521)
+.++.+++.+. ..+....++.|.+|+++|++++|+......+|..+++.+.+.+ .+.++|++.|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 33444444443 3467789999999999999999999999999999887666544 3577899999998888777
Q ss_pred HHHHHHHhcCCCC
Q 009978 268 WVLVWLSATSSTP 280 (521)
Q Consensus 268 ~~i~~~~~~~~~~ 280 (521)
..++.+++.||++
T Consensus 449 ~~~~~~~~~~e~~ 461 (479)
T PRK10077 449 AALFMWKFVPETK 461 (479)
T ss_pred HHHHHHhccccCC
Confidence 7766666655543
No 169
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.36 E-value=3e-11 Score=118.95 Aligned_cols=150 Identities=18% Similarity=0.121 Sum_probs=115.2
Q ss_pred hhhhhhhhhcCCcchhhHHHHHHH-HHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh-c---cccchHHHHHH
Q 009978 121 AIVPLSLAHGWSRSFSGIVQSSFL-WGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW-A---ADTSLLALLAM 195 (521)
Q Consensus 121 ~~~~~~~~~~~s~~~~g~~~s~~~-~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~-~---~~~~~~~l~~~ 195 (521)
..+.+.+|.|.+++++|++..... ....++.++.|++.||+|+|+.+..+.++.++..+.... . ..++.+.++..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 455666778999999999988776 466777899999999999999988877665333322211 1 01334444555
Q ss_pred HHHHhhhhcchhhHHHHHHHhcCCc-hhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHH
Q 009978 196 RAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (521)
Q Consensus 196 r~l~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i 270 (521)
..+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..|++..|++.+++.++..+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 5666777777778888888787766 78999999999999999999999999999999999999988877666543
No 170
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=5.2e-11 Score=118.83 Aligned_cols=156 Identities=11% Similarity=0.043 Sum_probs=114.1
Q ss_pred hhhhh-hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhc--cccchHHHHHHH
Q 009978 120 VAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--ADTSLLALLAMR 196 (521)
Q Consensus 120 ~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~--~~~~~~~l~~~r 196 (521)
...|. +.+++|.+......+.....+...++.++.|+++||+|||+++..+.++..++.+.+... ..++.+.+++..
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSI 350 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 33444 456688888776666666677778889999999999999999888877665544333221 112344445566
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHH-hhhhhhhHHHHHHHHHhhhcc--CchhHHHHHHHHHHHHHHHHH
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWL 273 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~--gw~~~f~~~~~~~~i~~i~~~ 273 (521)
++.|++.+...+...+++.|.+|.+.|+.+.++.. .+..+|..++|.+.+++.+.. +|+..+...++..++..+..+
T Consensus 351 ~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 351 MLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 77788888878888999999999999998888854 445589999999999998744 488888877777776666554
Q ss_pred Hh
Q 009978 274 SA 275 (521)
Q Consensus 274 ~~ 275 (521)
..
T Consensus 431 ~~ 432 (438)
T PRK09952 431 LM 432 (438)
T ss_pred Hc
Confidence 43
No 171
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.35 E-value=1.2e-10 Score=117.64 Aligned_cols=178 Identities=8% Similarity=0.058 Sum_probs=123.3
Q ss_pred HHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHH-HHhcCCCcch
Q 009978 319 RLLSKM-PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTL 396 (521)
Q Consensus 319 ~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~ 396 (521)
+.+++| .++..++..++..++++.+..+++.|+++.+|++..+++..............+++|++.|| +|+|
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r------ 88 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK------ 88 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH------
Confidence 445666 48888888888889999999999999988899999888877776665555556789999999 5988
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc---chhhHHhHHHHHHHHHHHH
Q 009978 397 TRKILQSIGFIAPGIALIGLTAAK-SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ---YSGVLHGISNTAGTFAAIL 472 (521)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~ 472 (521)
..+..+..+.++....+.... ......+...+.....+...+....+..+..|+ +++.+.++.+...++|..+
T Consensus 89 ---~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~ 165 (500)
T PRK09584 89 ---RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF 165 (500)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence 233344444444444433332 222222222222233333445555666776653 3456788899999999999
Q ss_pred HHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Q 009978 473 GTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYI 506 (521)
Q Consensus 473 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 506 (521)
+|.+.|++.+..| |+..|.+.++..+++.+.++
T Consensus 166 gp~i~g~l~~~~g-~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 166 SMLATPWLAAKYG-WSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred HHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 99999988766666554443
No 172
>PRK10504 putative transporter; Provisional
Probab=99.35 E-value=9.9e-11 Score=118.39 Aligned_cols=174 Identities=11% Similarity=0.045 Sum_probs=126.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHH
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (521)
+.+|.+.+..++.......+..++|.+.++ +|.++.+.++..+...++..++.++.|++.||+|+|+ ...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~---------~~~ 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN---------IFF 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH---------HHH
Confidence 356777778888877888888899999987 8999999999999988999999999999999999982 222
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh
Q 009978 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 482 (521)
.+..+.++..+.....++.+..++..++.+...+...+.......+..| ++++++.|+.+....+|..++|.+.|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 3333333333333334444444443333333333344455555566655 688999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 483 LVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
..| |+..|.+...+.+++.+.....
T Consensus 160 ~~g-w~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 160 YAS-WHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHHHHh
Confidence 887 9999988777666655554444
No 173
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.35 E-value=7e-11 Score=117.22 Aligned_cols=178 Identities=14% Similarity=0.156 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHHHhhh-hhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcch--HHHHHHHHHH
Q 009978 98 VKVVSMLALALALCNAD-RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGVALW 174 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr--~~~~~~~~~~ 174 (521)
.+.+....+++++..-. ..........-.+++|++..+...+.-+..+...++++++|++.||+|.| +++.++.+++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 33444444444443322 33444445555668999999999999999999999999999999999999 8888888777
Q ss_pred HHHHhhhhh--c----cccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 175 SLATFLTPW--A----ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 175 ~~~~~l~~~--~----~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
.+..+...+ . ..++.+.+++.-++.|+..|..++...++.++..|+++.+..+|++....-....+||++.+.+
T Consensus 360 ~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i 439 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLI 439 (477)
T ss_pred HHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554443333 0 0167788999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccC-chhHHHHHHHHHHHHHHHHHHh
Q 009978 249 MSQAG-IFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 249 ~~~~g-w~~~f~~~~~~~~i~~i~~~~~ 275 (521)
.+..| -|+.++...++.++.+++.++.
T Consensus 440 ~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 440 TDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 98876 8888888888777776666554
No 174
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.34 E-value=4.5e-11 Score=115.96 Aligned_cols=165 Identities=19% Similarity=0.246 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHH
Q 009978 330 IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAP 409 (521)
Q Consensus 330 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 409 (521)
++..++...........+|.++.+.+|.+..+.+++.+...++..++.++.|++.||+|+| ..+..+..+.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~l~~~~~~~ 72 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR---------RVLIIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH---------HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe---------eeEeehhhhh
Confidence 3455566666666777777566666899999999999999999999999999999999998 2334444444
Q ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc-chhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009978 410 GIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (521)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 488 (521)
++..+.....++.+..++..++.+...+...+....+..+..|+ +|+++.++.+....+|..++|.+.+.+.+..| ++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~ 151 (352)
T PF07690_consen 73 ALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WR 151 (352)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HC
T ss_pred hhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-cc
Confidence 44422222224444444444444444456666777777777775 99999999999999999999999999998877 88
Q ss_pred HHHHHHHHHHHHHHHH
Q 009978 489 GFLLLTSLLYFLSALF 504 (521)
Q Consensus 489 ~~~~~~~~~~~~~~~~ 504 (521)
..|++.+++.+++.++
T Consensus 152 ~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 152 WAFLISAILSLIAAIL 167 (352)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhh
Confidence 8999988888877664
No 175
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.34 E-value=1.5e-11 Score=122.63 Aligned_cols=175 Identities=18% Similarity=0.178 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhc--chHHHHHHHHHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG--GKIIMAWGVALWSL 176 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~G--rr~~~~~~~~~~~~ 176 (521)
+.+....+...+...........+|.+.++.+.+..+.+.+.++..+...++.+..|+++|+.. ++.+..++.++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 3445555566666666677788899999999999999999999999999999999999999988 45567788888888
Q ss_pred HHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-ch
Q 009978 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IF 255 (521)
Q Consensus 177 ~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-w~ 255 (521)
+.+.+.+. ++++.++..-.+.|+..|.........+.|..+.++-..+.|+.....+++.++||++++++.+..| |.
T Consensus 378 ~~~~~p~~--~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 378 ARLFLPFA--TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 88888888 9999999999999999999888888899999999999999999999999999999999999988877 99
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 009978 256 GPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 256 ~~f~~~~~~~~i~~i~~~~~ 275 (521)
..|+..++..++..+.+++.
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred eehhhcChHHHHHHHHHHHh
Confidence 99999998887776655544
No 176
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.33 E-value=8.4e-11 Score=115.63 Aligned_cols=167 Identities=13% Similarity=0.063 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHH
Q 009978 331 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPG 410 (521)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 410 (521)
+..+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+++| ..+..+.....
T Consensus 12 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r---------~~~~~~~~~~~ 81 (385)
T TIGR00710 12 CLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR---------PVLLLGLFIFA 81 (385)
T ss_pred HHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh---------HHHHHHHHHHH
Confidence 33333444555555667766666 899999999999999999999999999999999988 23334444444
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009978 411 IALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQG 489 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 489 (521)
+..+.....++.+...+..++.....+...+....+..+..| ++|+++.++.+....+|..++|.+.+.+.+..| ++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~ 160 (385)
T TIGR00710 82 LSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHA 160 (385)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHH
Confidence 444444444555544444334333334444555666677666 689999999999999999999999999999887 888
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 009978 490 FLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~ 508 (521)
.+++.+++.++..+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 161 IFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 8888777766665554443
No 177
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.33 E-value=1.2e-10 Score=114.32 Aligned_cols=172 Identities=11% Similarity=-0.069 Sum_probs=128.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHH
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (521)
+.++.+.+..++...........+|.+.++ +|.+..+.++..+...++..++.++.|++.||+|+| ..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~ 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK---------HILL 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH---------HHHH
Confidence 456667777777777777788888887766 899999999999999999999999999999999988 3344
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh
Q 009978 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 482 (521)
.+....++..+.....++.+..++.-++.+...+...+.......+..+ ++|+++.+.......++..++|.+.+.+.+
T Consensus 73 ~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 73 FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 4555555555555556666655554444333333334444555666666 488999999999999999999999999998
Q ss_pred cccchHHHHHHHHHHHHHHHHHHH
Q 009978 483 LVGSFQGFLLLTSLLYFLSALFYI 506 (521)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~ 506 (521)
..| |+..|.+.+++.++..+..+
T Consensus 153 ~~g-wr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 153 EFS-WRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHHH
Confidence 887 99999988877665554433
No 178
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.32 E-value=4.2e-10 Score=100.58 Aligned_cols=175 Identities=17% Similarity=0.098 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHH
Q 009978 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 177 (521)
|..+....... ......+.++...|++++.+|+|.+|...+.++..+|..+ +++.|.+.|++|++.++.+|.+...+|
T Consensus 2 W~~l~a~~~v~-~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 2 WLSLVASIWVQ-LCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred hhhHHHHHHHH-HhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 55444444444 3444667888999999999999999999999999999986 588899999999999999999999999
Q ss_pred Hhhhhhcc-----ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc
Q 009978 178 TFLTPWAA-----DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (521)
Q Consensus 178 ~~l~~~~~-----~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 252 (521)
..+..++. ..++|.+.+..++.|.+.+....++.....+.|| ++||.+.|+.-...+++..+-..+...+.+.-
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~ 158 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD 158 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCC
Confidence 88776653 2467888888888888877777777777788997 68999999999999999888777776665542
Q ss_pred CchhHHHHHHHHHHHHHHHHHHh
Q 009978 253 GIFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 253 gw~~~f~~~~~~~~i~~i~~~~~ 275 (521)
.-...+.......++.++...+.
T Consensus 159 ~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 159 PSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhe
Confidence 23333333333333333333333
No 179
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.32 E-value=5.1e-11 Score=119.08 Aligned_cols=163 Identities=11% Similarity=-0.033 Sum_probs=112.2
Q ss_pred hhhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHH---HHHhhhhhccccchHHH
Q 009978 117 VMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS---LATFLTPWAADTSLLAL 192 (521)
Q Consensus 117 ~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~---~~~~l~~~~~~~~~~~l 192 (521)
......|.+.++ .|.++.+.++..+.+.++..++.++.|++.||+++++....+..+.. ++.+.+......+.+..
T Consensus 269 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T TIGR00712 269 GVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVD 348 (438)
T ss_pred HHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 444556666654 69999999999999999999999999999999965432222322221 22222222111234444
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhh-hHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q 009978 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG-NAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (521)
Q Consensus 193 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~ 271 (521)
.+..++.|++.............|.+|+++|+.+.|+.+....+| ..+||.+.|.+.+..||...|++.++..++..+.
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 444455555433323333456789999999999999998887776 5789999999999999999999888877777766
Q ss_pred HHHhcCCC
Q 009978 272 WLSATSST 279 (521)
Q Consensus 272 ~~~~~~~~ 279 (521)
.+.+.+|+
T Consensus 429 ~~~~~~~~ 436 (438)
T TIGR00712 429 LIVVMIGE 436 (438)
T ss_pred HHHHHhhc
Confidence 66665554
No 180
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.32 E-value=2e-10 Score=112.90 Aligned_cols=156 Identities=12% Similarity=-0.030 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc
Q 009978 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
..+.....+|.+.++ +|+++.+.++..+...++..+++++.|++.||+||| ..+..+..+.++..+....
T Consensus 35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr---------~~~~~~~~~~~~~~~~~~~ 104 (394)
T PRK10213 35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR---------YVVILFAVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH---------HHHHHHHHHHHHHHHHHHH
Confidence 333444567777666 899999999999999999999999999999999998 3334444444444444444
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 009978 419 AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL 497 (521)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (521)
.++.+..++.-++.+...+...+....+..+..| ++|+++.++.....++|..++|.+.+.+.+..| |+..|++.+++
T Consensus 105 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~l 183 (394)
T PRK10213 105 ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WRNVFNAAAVM 183 (394)
T ss_pred HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHH
Confidence 5556555555444444444455566666677776 689999999999999999999999999999887 99999888766
Q ss_pred HHHHHHHH
Q 009978 498 YFLSALFY 505 (521)
Q Consensus 498 ~~~~~~~~ 505 (521)
.+++.+..
T Consensus 184 ~~~~~l~~ 191 (394)
T PRK10213 184 GVLCIFWI 191 (394)
T ss_pred HHHHHHHH
Confidence 65544433
No 181
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.32 E-value=1.5e-10 Score=110.51 Aligned_cols=161 Identities=14% Similarity=0.116 Sum_probs=136.3
Q ss_pred hhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHH
Q 009978 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (521)
Q Consensus 118 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~ 197 (521)
+......+-++-+.++...|.+.+...+.-++.-.+..++.+|+|.|+.++++..++.+=.++++++ ++.+.+.+.+.
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~--~~~~~i~~~kl 320 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA--TNPWVISLIKL 320 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh--cchHHHHHHHH
Confidence 4444444445556677789999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhhhcchhhHHHHHHHhcCCchhhHHHHHHH-HhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc
Q 009978 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIA-MGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (521)
Q Consensus 198 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~ 276 (521)
+.|+-.+....+...++++.+|++-.++...+. +...++|..+.+.++|.+.++.|.+..|++.+.+.++..++..+..
T Consensus 321 LH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 321 LHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 999999999999999999999988878888774 7889999999999999999999999999999998887777777665
Q ss_pred CCCC
Q 009978 277 SSTP 280 (521)
Q Consensus 277 ~~~~ 280 (521)
++++
T Consensus 401 ~~~~ 404 (412)
T PF01306_consen 401 KKDK 404 (412)
T ss_dssp --SS
T ss_pred cCCC
Confidence 5443
No 182
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.32 E-value=2.8e-11 Score=123.11 Aligned_cols=163 Identities=20% Similarity=0.066 Sum_probs=108.9
Q ss_pred hhhhhhhhhhhhhcCCcchhhH------------HHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhc
Q 009978 117 VMSVAIVPLSLAHGWSRSFSGI------------VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (521)
Q Consensus 117 ~~~~~~~~~~~~~~~s~~~~g~------------~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~ 184 (521)
......|.+.++.|.+....+. ...+..++..++.++.++++||+|||++++++..+.+++.++.++.
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3444577777888876543221 1234445666788899999999999999988887777766555443
Q ss_pred cc--cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc----------c
Q 009978 185 AD--TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ----------A 252 (521)
Q Consensus 185 ~~--~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~----------~ 252 (521)
.. ++...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|.+++|.+.+.+.+. .
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 465 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI 465 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc
Confidence 10 11111111111222222233456677889999999999999999999999999999999998873 3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 009978 253 GIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (521)
Q Consensus 253 gw~~~f~~~~~~~~i~~i~~~~~~~~~~ 280 (521)
++...|++.+++.++..+.. ++.||++
T Consensus 466 ~~~~~~~i~~~~~~~~~i~~-~~lpEt~ 492 (502)
T TIGR00887 466 WMGHVLEIFALFMFLGILFT-LLIPETK 492 (502)
T ss_pred cchHHHHHHHHHHHHHHHHh-eEeccCC
Confidence 45667888877777665544 4556543
No 183
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.31 E-value=4.7e-09 Score=107.81 Aligned_cols=158 Identities=18% Similarity=0.253 Sum_probs=128.3
Q ss_pred hhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-cchHHHHHHHHHHHHHHhhhhhcccc------chHH
Q 009978 119 SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLTPWAADT------SLLA 191 (521)
Q Consensus 119 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~~~~~~~~~~l~~~~~~~------~~~~ 191 (521)
......+.+.+|.+......+...+.....+.++++|+++|++ |+++.+.++.++..++.++.++...+ ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 3445555667899999999999999988899999999999985 99999999999999998887664211 1234
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhcCCch---hhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-------CchhHHHHH
Q 009978 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQT---ERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVIF 261 (521)
Q Consensus 192 l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------gw~~~f~~~ 261 (521)
.+++-.+.++|.|+.-+...+...|.++++ +|...+.++..+.++|+++++++.+++.+.. +|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 667778888999999999999999999754 4678899999999999999999999887443 699999999
Q ss_pred HHHHHHHHHHHHHhc
Q 009978 262 GLSGFLWVLVWLSAT 276 (521)
Q Consensus 262 ~~~~~i~~i~~~~~~ 276 (521)
++..++.+++.....
T Consensus 168 ~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 168 AILMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHHHhc
Confidence 988887776655443
No 184
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.31 E-value=2.5e-10 Score=107.85 Aligned_cols=159 Identities=16% Similarity=0.139 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhh---hhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHH
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSL---AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 177 (521)
+.+..+..++............+.+.+ .+|.++.+.++..+.+..+..++.++.+++.||+|+||++.++..+..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 333445555555445555555555554 36999999999999999999999999999999999999998888888777
Q ss_pred HhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhH
Q 009978 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (521)
Q Consensus 178 ~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~ 257 (521)
.++.... ++... ...-++.|++.+..+|...+...+..|+ +.+.+.++. ....+|..++|++.|.+.+..|.+..
T Consensus 222 ~~l~~~~--~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a 296 (310)
T TIGR01272 222 SIGAALT--HGYVA-MWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLA 296 (310)
T ss_pred HHHHHHc--CCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHH
Confidence 7665554 43332 3355588999999999999999998864 456667775 56679999999999999999999888
Q ss_pred HHHHHHH
Q 009978 258 FVIFGLS 264 (521)
Q Consensus 258 f~~~~~~ 264 (521)
|++..+.
T Consensus 297 ~~v~~~~ 303 (310)
T TIGR01272 297 FALPVPC 303 (310)
T ss_pred HHHHHHH
Confidence 8754443
No 185
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.31 E-value=4.7e-11 Score=119.58 Aligned_cols=133 Identities=17% Similarity=0.163 Sum_probs=109.4
Q ss_pred hhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHH
Q 009978 121 AIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (521)
Q Consensus 121 ~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~ 199 (521)
..+.+.++ ++ ++.+.+++.++..++..++.+++|+++||+|+|+++.++.++.+++.++..+.. ++.+.+++..++.
T Consensus 244 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 321 (437)
T TIGR00792 244 VQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-SNLPLILVLIILA 321 (437)
T ss_pred hhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHHH
Confidence 34444443 34 566778888888999999999999999999999999999988888877766542 3566777788889
Q ss_pred hhhhcchhhHHHHHHHhcCC-------chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCch
Q 009978 200 GLAEGVALPAMNNMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (521)
Q Consensus 200 G~g~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~ 255 (521)
|++.+...+...++++|..| ++++|.++|+.+....+|..+++.+.+.+.+..||.
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 322 GFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999889999999998875 456799999999999999999999999998877763
No 186
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.31 E-value=3.3e-10 Score=114.91 Aligned_cols=173 Identities=14% Similarity=0.054 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHH
Q 009978 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (521)
Q Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (521)
+..+++..++...-...+..-+|.+..+ +|.+..+.++..+.+.++..++.+..|++.||+||| ..+..+
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk---------~~l~~~ 77 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK---------RLLMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHH
Confidence 3445555666656666677788888777 899999999999999999999999999999999999 344445
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHH-HHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhc
Q 009978 406 FIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLV-NLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (521)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 483 (521)
.....+..+.....++.+..++.-.+.+...+...+.... ...+..| ++|+++.|+......+|..+||.++|.+.++
T Consensus 78 ~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 78 GTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5555555555555566665555433333333333343333 3344444 7999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 484 VGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
.| |++.|++...+.++..++.....
T Consensus 158 ~g-wr~~f~i~~~~~~~~~~l~~~~l 182 (495)
T PRK14995 158 FY-WGSVFLINVPIVLVVMGLTARYV 182 (495)
T ss_pred CC-hHHHHHHHHHHHHHHHHHHHHhC
Confidence 87 99999888776666655544443
No 187
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.30 E-value=3.7e-10 Score=111.31 Aligned_cols=172 Identities=13% Similarity=-0.019 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (521)
-+....+..+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|++.||+||| ..+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r---------~~l~~ 73 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK---------PVAIP 73 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh---------HHHHH
Confidence 33444455555556666666778887777 899999999999999999999999999999999988 23334
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhc
Q 009978 405 GFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (521)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 483 (521)
+.....+........++.+..++..++.....+...+....+..+..| ++|+++.++.+....++..++|.+.+.+.+.
T Consensus 74 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 74 GAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444444444444444444443333333222233334445556666655 6999999999999999999999999988887
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHH
Q 009978 484 VGSFQGFLLLTSLLYFLSALFYII 507 (521)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~~~ 507 (521)
.| |+..+++.+++.++..++.+.
T Consensus 154 ~g-~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 154 FP-WQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred cC-hHHHHHHHHHHHHHHHHHHHH
Confidence 76 888888887776665554433
No 188
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.30 E-value=3.8e-09 Score=102.35 Aligned_cols=371 Identities=13% Similarity=0.030 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhc-CCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHH--
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHG-WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA-- 177 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~-- 177 (521)
...++...+++....-++....+.+..+.. -+---.+...-.-.+..++.++..|.+.||..|.+++..+.+..-++
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 344567778888788888888888777663 23333444444556677788899999999999999877765543322
Q ss_pred --Hhhhh--hcccc-----c--hHHHHHHHHHHhhhhcc-hhhHHHHHHHhcC------CchhhHHHHHHHHhhhhhhhH
Q 009978 178 --TFLTP--WAADT-----S--LLALLAMRAVVGLAEGV-ALPAMNNMVARWF------PQTERARAVAIAMGGFTSGNA 239 (521)
Q Consensus 178 --~~l~~--~~~~~-----~--~~~l~~~r~l~G~g~~~-~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~g~~ 239 (521)
+.+.. +.... + ...+++.-.+.|.-.-. ......+.=.||. +++.+.+.++.+.-.-.+..+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 22211 11101 1 11222222222221111 1112222223443 355677888888888889999
Q ss_pred HHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc----CCCCCCCCCCchhHHHHHHHhhccccccCC-------CC
Q 009978 240 IGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT----SSTPDRHPQISKYELEYILREKQKPLLMGN-------KH 308 (521)
Q Consensus 240 ~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 308 (521)
++|++.|.+.+..+.+....+.++..++..++-+++. +..|+-..+.++++.+...+..+....... .+
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWN 243 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHH
Confidence 9999999999988998888888887777655433221 122211110000000000000000000000 00
Q ss_pred CCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHH
Q 009978 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (521)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (521)
.-.....+++..+++|.++......+ .++..-++......|+.. .|+++...|..-+...+.++.+.++..++.+|+|
T Consensus 244 ~~~~~~~~w~~Y~~q~vflas~alal-LY~TVLsf~~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 244 PLRTIIRGWRTYFRQPVFLASFALAL-LYFTVLSFGGLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred HHHHHhccHHHHHhCHHHHHHHHHHH-HHHHHhcCcHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00112344556666665554444444 444455677888899998 5999999999999999999999999999999998
Q ss_pred hcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH-----HHHhhhhhhhHHHHHhhhccchhhHHhHHH
Q 009978 389 QRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAI-----GMKSFSHSGFLVNLQEIAPQYSGVLHGISN 463 (521)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 463 (521)
..+.-.. ....-..++..++..+.....+........++.+. |..++-.......+..+++++||+..|.-+
T Consensus 322 lvr~G~~---~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~ 398 (432)
T PF06963_consen 322 LVRAGLW---SLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQN 398 (432)
T ss_pred chhhHHH---HHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHH
Confidence 7632110 01111112222222222211110122222222222 222222233333344455569999999999
Q ss_pred HHHHHHHHHHHHH
Q 009978 464 TAGTFAAILGTVG 476 (521)
Q Consensus 464 ~~~~~g~~~~~~~ 476 (521)
...++...+.-.+
T Consensus 399 sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 399 SLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHH
Confidence 9999887765544
No 189
>PRK15075 citrate-proton symporter; Provisional
Probab=99.29 E-value=1.8e-10 Score=114.92 Aligned_cols=145 Identities=17% Similarity=0.091 Sum_probs=104.7
Q ss_pred Hhhhhhhhhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh-hh-hhcccc
Q 009978 111 CNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LT-PWAADT 187 (521)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~-l~-~~~~~~ 187 (521)
............|.+.++ +|.+..+.++....+.++..++.+++|+++||+|||+++..+.++..+... .. .....+
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 333344455567776655 799999999998899999999999999999999999988776554433221 11 111113
Q ss_pred chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHh-hhhhhhHHHHHHHHHhhhccCch
Q 009978 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMG-GFTSGNAIGLVLSPILMSQAGIF 255 (521)
Q Consensus 188 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~l~~~l~~~~gw~ 255 (521)
++..+.+..++.|++.+...+....++.|.+|+++|+.+.++... +..++..++|.+.+++.+..|++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 444444555566677666666777889999999999999998644 44445778999999999988864
No 190
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.29 E-value=1.9e-10 Score=116.93 Aligned_cols=171 Identities=15% Similarity=0.070 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHH
Q 009978 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (521)
Q Consensus 327 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (521)
..+.+..++............|.+.++ +|.+..+.++..+...++..++.++.|++.||+||| ..+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~ 74 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR---------RLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH---------HHHHHHH
Confidence 344455555556666677778887777 899999999999999999999999999999999988 3344444
Q ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 407 IAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
.+..+..+.....++.+..++.-++.+...+...+....+..+..| ++|+++.++......+|..++|.+.|++.++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 154 (485)
T TIGR00711 75 FAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH 154 (485)
T ss_pred HHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC
Confidence 5555555555555555555544444444444455566666667765 699999999999999999999999999999887
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh
Q 009978 486 SFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
|+..|++.+.+.++..++....
T Consensus 155 -w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 155 -WRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred -ceehhhhhhHHHHHHHHHHHHH
Confidence 8888888776666555544443
No 191
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.29 E-value=1.7e-10 Score=114.30 Aligned_cols=156 Identities=13% Similarity=0.028 Sum_probs=120.0
Q ss_pred hhhhhhh-hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhcc---ccchHHHHH
Q 009978 119 SVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA---DTSLLALLA 194 (521)
Q Consensus 119 ~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~---~~~~~~l~~ 194 (521)
....|.+ .+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++.+++.++..+.. ..+++.+++
T Consensus 235 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 314 (406)
T PRK15402 235 IALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTA 314 (406)
T ss_pred HHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHH
Confidence 3344554 466899999999988888889999999999999999999999998888777776655431 135667778
Q ss_pred HHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHH
Q 009978 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (521)
Q Consensus 195 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~ 274 (521)
..++.|++.+...+......... ++++|+++.+.++....+|..+|+.+++.+.+..++....+..++..++.+++...
T Consensus 315 ~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK15402 315 GLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRI 393 (406)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 88899999887777666655544 45899999999999999999999999999988888776655555555544443333
Q ss_pred h
Q 009978 275 A 275 (521)
Q Consensus 275 ~ 275 (521)
.
T Consensus 394 ~ 394 (406)
T PRK15402 394 F 394 (406)
T ss_pred H
Confidence 3
No 192
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.29 E-value=2.7e-10 Score=110.39 Aligned_cols=159 Identities=11% Similarity=0.003 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 009978 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
.....+...+|.+.+| +|+++.+.+++.+.+.++..++++..|++.||+|||+ +................
T Consensus 5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~---------~~~~~~~~~~~~~~~~~ 74 (368)
T TIGR00903 5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRW---------FLFGSLATFAAAAGRLL 74 (368)
T ss_pred HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH---------HHHHHHHHHHHHHHHHH
Confidence 3445556667777776 8999999999999999999999999999999999772 22222222222221122
Q ss_pred ccchhHHHHHHH-HHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 009978 418 AAKSPVMASAWL-TLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSL 496 (521)
Q Consensus 418 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 496 (521)
..++...+++.- +.+.+.. ...+......+..++++|+++.++.+....+|..+++.+.+.+.+..| |+..|++.++
T Consensus 75 ~~~~~~~l~~~R~l~G~g~~-~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~ 152 (368)
T TIGR00903 75 DPFNYEWLLACQLLAALGQP-FLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAA 152 (368)
T ss_pred HhccHHHHHHHHHHHHhHhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHH
Confidence 212333333332 3333322 333333334444555799999999999999999999999999998887 9999999777
Q ss_pred HHHHHHHHHHHh
Q 009978 497 LYFLSALFYIIF 508 (521)
Q Consensus 497 ~~~~~~~~~~~~ 508 (521)
+.++..++.+..
T Consensus 153 l~~~~~~~~~~~ 164 (368)
T TIGR00903 153 VAAAGIILVLAA 164 (368)
T ss_pred HHHHHHHHHHHH
Confidence 766655544443
No 193
>PRK11043 putative transporter; Provisional
Probab=99.29 E-value=4e-10 Score=111.48 Aligned_cols=165 Identities=12% Similarity=0.081 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHH--HHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHH
Q 009978 336 HSWGFFVILSWMPIY--FNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
....+.....+.|.+ +++.+|.++.+.++..+...++..++.++.|++.||+++|+ .+..+.....+..
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~---------~~~~~~~~~~~~~ 85 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKP---------VLLAGLSLFALGS 85 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcH---------HHHHHHHHHHHHH
Confidence 333344444444443 44458999999999999999999999999999999999982 3333333344444
Q ss_pred HHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 009978 414 IGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLL 492 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 492 (521)
+.....++.+...+..++.+...+...+.......+..| ++++...+..+....++..++|.+.+.+.+..| |+..|+
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~ 164 (401)
T PRK11043 86 LGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFA 164 (401)
T ss_pred HHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHH
Confidence 444444444444333222222222222333344555555 577888898888889999999999999999887 888888
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 009978 493 LTSLLYFLSALFYIIFST 510 (521)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~ 510 (521)
+.+++.++..+..+..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 165 TLFAITLLLILPTLRLKP 182 (401)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 887777666655554443
No 194
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.28 E-value=7.2e-11 Score=115.71 Aligned_cols=151 Identities=14% Similarity=0.011 Sum_probs=107.8
Q ss_pred HHHHhhhhhhhhhhhhhh-hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcc-hHHHH-HH-HHHHHHHHhhhhh
Q 009978 108 LALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMA-WG-VALWSLATFLTPW 183 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Gr-r~~~~-~~-~~~~~~~~~l~~~ 183 (521)
.+.............|.+ .+++|.++.+.+++.+...++..++.++.|++.||.++ |+... .. .....++......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
T TIGR00881 225 YVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL 304 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Confidence 333333333444455554 45679999999999999999999999999999998643 33222 21 1222222222222
Q ss_pred ccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHH
Q 009978 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (521)
Q Consensus 184 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f 258 (521)
....+.+..++..++.|+......+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.+||++.|
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 305 NPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred CcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 111455556666777777665656667788999999999999999999999999999999999999999998754
No 195
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.28 E-value=3.4e-10 Score=110.52 Aligned_cols=148 Identities=11% Similarity=-0.007 Sum_probs=104.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (521)
.+|..++..+........+..+.|.++++.+|+++.+.+++.+...++..++.++.|++.||+|+|+ .+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~---------~~~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRY---------TTTL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchH---------HHHH
Confidence 4566677777777777788888887777779999999999999999999999999999999999882 3334
Q ss_pred HHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh
Q 009978 405 GFIAPGIALIGLTAAK-SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 405 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 482 (521)
+.+...+..+.....+ +.+..++..++.+...+. ......+..+..| ++|+++.++.....++|..+++.+.+.+.+
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4444444444444444 444443333322222222 2334455566665 689999999998888888888888777665
No 196
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.27 E-value=5.5e-10 Score=110.53 Aligned_cols=169 Identities=13% Similarity=0.053 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
...+.+++.+..........| .+++.+|++..+.++..+...++..++++..|++.||+|+| ..+..+.+
T Consensus 12 ~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r---------~~~~~~~~ 81 (412)
T TIGR02332 12 FLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR---------RWIAGIMV 81 (412)
T ss_pred HHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH---------HHHHHHHH
Confidence 334444443444444445555 55666999999999999999999999999999999999998 33444444
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhc---
Q 009978 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVEL--- 483 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~--- 483 (521)
+.++..+.....++.+.+++.-++.+...+...+....+..+..| ++|+++.|+++....+|..+++.+.+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 82 LWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 445454544455555544444333333333344555566677766 5899999999999999999999999988752
Q ss_pred ---ccchHHHHHHHHHHHHHHHHHHHH
Q 009978 484 ---VGSFQGFLLLTSLLYFLSALFYII 507 (521)
Q Consensus 484 ---~g~~~~~~~~~~~~~~~~~~~~~~ 507 (521)
.| |+..|++.++..++..++.++
T Consensus 162 ~~~~g-wr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 162 MALKG-WQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred CCccc-hhHHHHHHHHHHHHHHHHHhh
Confidence 35 999999887776655444433
No 197
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.25 E-value=4.9e-10 Score=112.67 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=125.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHH-HHhcCCCcchhHHHHH
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQ 402 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~~ 402 (521)
|.++.++...+...++++++..+++.|+++.+|++..+++++...+.....+..+++|+++|| +||| ..+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r---------~~~ 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK---------RTI 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH---------HHH
Confidence 456677777788889999999999999999899999999888888887788888899999999 8999 233
Q ss_pred HHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-c--chhhHHhHHHHHHHHHHHHHHHHHH
Q 009978 403 SIGFIAPGIALIGLTAAKS-PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-Q--YSGVLHGISNTAGTFAAILGTVGAG 478 (521)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~g~~~g~~~~~~~~g~~~~~~~~g 478 (521)
..+.++..+..+......+ ....++...+.....+...+.......+..| + +|+.++++.+...++|..+||.+.|
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 4444444444433333322 2222222233233334444555666677665 3 4577899999999999999999999
Q ss_pred HHhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 479 FFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
++.++.| |+..|++.++..+++.+.+...
T Consensus 165 ~l~~~~g-w~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 165 VIADKFG-YSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHhhC-hHHHHHHHHHHHHHHHHHHHHc
Confidence 9999987 9999988766555555554443
No 198
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.25 E-value=4e-10 Score=111.37 Aligned_cols=149 Identities=17% Similarity=0.125 Sum_probs=108.2
Q ss_pred hhhhhhhhcCCcchhhHHHHHH-HHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhh---hhccccchHHHHHHH-
Q 009978 122 IVPLSLAHGWSRSFSGIVQSSF-LWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMR- 196 (521)
Q Consensus 122 ~~~~~~~~~~s~~~~g~~~s~~-~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~---~~~~~~~~~~l~~~r- 196 (521)
.+.+.+++|.++.++|++.+.. .++..++.+++|++.||+|+|+.+.++.++..+..+.. ++.. ++.+.+++.-
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~ 311 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-KHLWTMALAIG 311 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHH
Confidence 3456677899999999998665 45688999999999999999998877776665554333 2321 3455555444
Q ss_pred ---HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 009978 197 ---AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (521)
Q Consensus 197 ---~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~ 273 (521)
+..|++.+...+....++.+.+|.+++ ++.+...++|..+++.++|.+.+.+||+..|.+.++++++..++.+
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 345566666677777777777775544 5555556777777777899999999999999999888877665554
Q ss_pred Hh
Q 009978 274 SA 275 (521)
Q Consensus 274 ~~ 275 (521)
..
T Consensus 388 ~~ 389 (402)
T PRK11902 388 LM 389 (402)
T ss_pred HH
Confidence 43
No 199
>TIGR00898 2A0119 cation transport protein.
Probab=99.25 E-value=9.4e-11 Score=119.69 Aligned_cols=149 Identities=19% Similarity=0.101 Sum_probs=112.5
Q ss_pred hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhc
Q 009978 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (521)
Q Consensus 125 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~ 204 (521)
..++++.+.. +......+...++.++.+++.||+|||+.+.++.++.+++.++..+....+.+..++..++.+++.+
T Consensus 349 ~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (505)
T TIGR00898 349 DLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGIT 425 (505)
T ss_pred cccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence 3344454432 3333455667788889999999999999999999988888877776622222455555667777777
Q ss_pred chhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 205 VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (521)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~ 279 (521)
...+....+..|.+|++.|+.++|+.+....+|.+++|.+.+ + ...++...+++.++..++..+..++ .||+
T Consensus 426 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet 497 (505)
T TIGR00898 426 SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPET 497 (505)
T ss_pred HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCC
Confidence 778888999999999999999999999999999999999998 4 4456777888888777776665544 3443
No 200
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.24 E-value=1.3e-09 Score=109.88 Aligned_cols=161 Identities=11% Similarity=0.089 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHH
Q 009978 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
....+....+.|.+.++ +|++..+.++..+...++..++.++.|++.||+|+| ..+..+.+..++..+..
T Consensus 49 ~~~~~~~~~~~~~l~~~-~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r---------~~~~~~~~~~~~~~~~~ 118 (476)
T PLN00028 49 FVSTFAAAPLLPIIRDN-LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR---------YGSAFLLMLTAPAVFCM 118 (476)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHHHHHHHHHHHHHH
Confidence 33344445555555554 899999999998888899999999999999999998 23333444444444444
Q ss_pred hccchhHHHHHH-HHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh----c-----cc
Q 009978 417 TAAKSPVMASAW-LTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE----L-----VG 485 (521)
Q Consensus 417 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----~-----~g 485 (521)
...++....++. ++.+.+.. ... ....+..+..| ++||.+.|+.+...++|..+++.+.+.+.+ . .|
T Consensus 119 ~~~~s~~~l~~~r~l~G~~~~-~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g 196 (476)
T PLN00028 119 SLVSSATGFIAVRFFIGFSLA-TFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA 196 (476)
T ss_pred HHhcCHHHHHHHHHHHHHHHH-hhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Confidence 444444444333 22333322 222 23334556666 689999999998888888888777665533 1 24
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 486 SFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
|+..|++.+++.++..++.+++.+
T Consensus 197 -Wr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 197 -WRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999988877766665555543
No 201
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.24 E-value=4.3e-10 Score=110.27 Aligned_cols=158 Identities=11% Similarity=0.073 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc
Q 009978 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
+...+...+|.+.++ +|+++.+.++..+...++..++.++.|++.||++|| ..+..+....++.......
T Consensus 6 ~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 6 AIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK---------PVILGGTLVFALAAVACAL 75 (377)
T ss_pred HHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh---------HHHHHHHHHHHHHHHHHHH
Confidence 344556778888877 899999999999999999999999999999999988 3334444444444444444
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 009978 419 AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL 497 (521)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (521)
.++.+......++.....+...+....+..+..| ++|+++.++.+....+|..++|.+.+.+.+..| ++..|++.+++
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 154 (377)
T PRK11102 76 AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALA 154 (377)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHH
Confidence 4454444444444333344444555566666666 689999999999999999999999999999887 88888887777
Q ss_pred HHHHHHHHHH
Q 009978 498 YFLSALFYII 507 (521)
Q Consensus 498 ~~~~~~~~~~ 507 (521)
.++..++...
T Consensus 155 ~~~~~~~~~~ 164 (377)
T PRK11102 155 AILAAALVFF 164 (377)
T ss_pred HHHHHHHHHH
Confidence 6665554433
No 202
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.24 E-value=6.1e-10 Score=109.47 Aligned_cols=172 Identities=15% Similarity=0.062 Sum_probs=117.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHH
Q 009978 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQ 402 (521)
Q Consensus 323 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~ 402 (521)
+|.++.+.+..++...+........+.+..+ ++.++.+.++..+.+.+...+..++.|++.||++||+. +
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~v---------l 71 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRV---------M 71 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchh---------h
Confidence 4567777777777777666666666666655 78888889999999999999999999999999999942 2
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHh
Q 009978 403 SIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (521)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 481 (521)
..+..+.++..+......+. +..-++.+...+...+....+..+..| ++|++++|+......++..+||.++|.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 72 FIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222222222 222223334445556666777777776 69999999999999999999999999999
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 482 ELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 482 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
+.. +...+.+.+.+.+++.+....++
T Consensus 149 ~~~--~~~~~~i~~~~~~~~~~~~~~l~ 174 (393)
T PRK11195 149 DPH--AEAALAVCALIYLLAALFNLFIP 174 (393)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHhcCC
Confidence 863 56666655555444444444444
No 203
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.24 E-value=7.3e-10 Score=107.86 Aligned_cols=168 Identities=17% Similarity=0.205 Sum_probs=129.6
Q ss_pred HHhhhhhhhhhhhhhhhhhhc-CCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccc
Q 009978 110 LCNADRVVMSVAIVPLSLAHG-WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS 188 (521)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~ 188 (521)
+.......+....+.+.++.| .+....+.+.++..++-.+.-...+++..|+|.|+++.++.+..++=..+++... ++
T Consensus 218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~-~~ 296 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS-DP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 334444455556666777777 6777888888888888888889999999999999999999999988887777652 23
Q ss_pred hHH----HHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHh-hhhhhhHHHHHHHHHhhhccCch------hH
Q 009978 189 LLA----LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMG-GFTSGNAIGLVLSPILMSQAGIF------GP 257 (521)
Q Consensus 189 ~~~----l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~l~~~l~~~~gw~------~~ 257 (521)
.+. .++...++|+..+....+...++.+..|++.|+++.++++. ..++|..+|..++|++.+++|-+ ..
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 232 23345679999999999999999999999999999999876 46899999999999999987744 45
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q 009978 258 FVIFGLSGFLWVLVWLSATSS 278 (521)
Q Consensus 258 f~~~~~~~~i~~i~~~~~~~~ 278 (521)
+.+.+++.++..++.+.+.+|
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 555566555555555554443
No 204
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.22 E-value=8.5e-10 Score=110.09 Aligned_cols=157 Identities=17% Similarity=0.079 Sum_probs=100.9
Q ss_pred hhhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhh--hccccchHHHH
Q 009978 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP--WAADTSLLALL 193 (521)
Q Consensus 117 ~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~--~~~~~~~~~l~ 193 (521)
.+...+|.+. +++|.+..+.++..++..++..+++++.|+++||+|||+.+.++.++.++...... ....++....+
T Consensus 261 ~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (432)
T PRK10406 261 TFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAF 340 (432)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 3444566654 56899999999998888888889999999999999999988776654433332111 11012333222
Q ss_pred HHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhh-hhHHHHHHHHHhhhccC-chhHHHHHHHHHHHHHHH
Q 009978 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLV 271 (521)
Q Consensus 194 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g-w~~~f~~~~~~~~i~~i~ 271 (521)
..-.+.+++.+...+....+++|++|++.|+.+.|+.+...++ .....|.+.+.+ +..| |...++..++..++..+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHH
Confidence 2222232333344455678899999999999999998766554 344577777755 4445 555566555555555544
Q ss_pred HHH
Q 009978 272 WLS 274 (521)
Q Consensus 272 ~~~ 274 (521)
.++
T Consensus 420 ~~~ 422 (432)
T PRK10406 420 SLM 422 (432)
T ss_pred HHH
Confidence 444
No 205
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.21 E-value=3.1e-10 Score=106.12 Aligned_cols=174 Identities=17% Similarity=0.106 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhh-hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh
Q 009978 101 VSMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 179 (521)
.+.+++.++..+...-.++..+|.+ .++++.++.+.|...+.+.+...+..+.+|+++||+|.+|++......++++..
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 3344555565555555677777765 556999999999999999999999999999999999999999999988888887
Q ss_pred hhhhcc-----ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-
Q 009978 180 LTPWAA-----DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG- 253 (521)
Q Consensus 180 l~~~~~-----~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g- 253 (521)
+..+.. ..+....+..-+..++..|.....++.++..++| ++-|.+.|+.....++|...-|..-+...+..|
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 766652 1234444444444455555555567888999986 588999999999999999999999888888777
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 009978 254 IFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 254 w~~~f~~~~~~~~i~~i~~~~~ 275 (521)
+...|++.....+++.+..+..
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999988888877765544
No 206
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.21 E-value=1.3e-09 Score=107.45 Aligned_cols=166 Identities=11% Similarity=0.000 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHH
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (521)
...+..++...........+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+ .+..+..
T Consensus 12 ~~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~---------~~~~~~~ 81 (394)
T PRK11652 12 MLVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP---------VILVGMS 81 (394)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH---------HHHHHHH
Confidence 33344444444445555566777766 8999999999999999999999999999999999982 2333333
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009978 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGS 486 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 486 (521)
...+..+.....++.+..++..++.....+...+.......+..+ ++++.+.+..+....++..++|.+.+.+.+..|
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g- 160 (394)
T PRK11652 82 IFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG- 160 (394)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 334433333344444444333333222222333333444455555 688899999999999999999999999998877
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 009978 487 FQGFLLLTSLLYFLSALF 504 (521)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~ 504 (521)
|+..|.+.+++.++..+.
T Consensus 161 ~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 161 WRACYLFLLLLGAGVTFS 178 (394)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 888888877665544443
No 207
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.21 E-value=2.6e-08 Score=96.36 Aligned_cols=316 Identities=14% Similarity=0.050 Sum_probs=183.6
Q ss_pred HHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCC
Q 009978 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (521)
Q Consensus 140 ~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 219 (521)
.++......+++++.+.+.|+.|.|+.+.++...+....+.+.+ .|-+.++++-.+.|+|.+..+.....++.+..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~---~N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF---PNSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh---cchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 66777888899999999999999999999999999888777665 577888899999999999999999999999999
Q ss_pred chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc--------Cch-h----------HHHHHHHHHHHHHHHHHHhcCCCC
Q 009978 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--------GIF-G----------PFVIFGLSGFLWVLVWLSATSSTP 280 (521)
Q Consensus 220 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--------gw~-~----------~f~~~~~~~~i~~i~~~~~~~~~~ 280 (521)
++.+.+..++.......+.++|..+...+...- +-+ . ...+.+++..+..+...-.. ..|
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~-~~p 211 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFD-FLP 211 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhee-ecC
Confidence 999999999999999998888876654442211 111 0 11111111111111111111 111
Q ss_pred CCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--C
Q 009978 281 DRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHI--D 358 (521)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~--~ 358 (521)
.+... .+.+ ..+....+..+..-+++++|+.+.+....+........+....|..+.-.... +
T Consensus 212 ~~~~~---~~~~------------~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n 276 (461)
T KOG3098|consen 212 SKDVV---NCKS------------SSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSN 276 (461)
T ss_pred ccchh---hhhh------------hccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCc
Confidence 11000 0000 00000001112233556677777776666655555444555555544432122 2
Q ss_pred c-ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHH--Hhcc-c--------------
Q 009978 359 L-RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG--LTAA-K-------------- 420 (521)
Q Consensus 359 ~-~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-------------- 420 (521)
. ...+......+++..++....+.+.+|..+.+.. ..+.++..+.....++ +... +
T Consensus 277 ~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~------~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~ 350 (461)
T KOG3098|consen 277 TTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK------PTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFT 350 (461)
T ss_pred chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC------cchhHHHHHHHHHHHHHhccccccCCCCCCcccccccc
Confidence 1 2234444455666666667777777776655322 2222222222222211 1111 0
Q ss_pred -hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 009978 421 -SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFF 480 (521)
Q Consensus 421 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 480 (521)
......+..++.+..-.......+.+...+.|++|.++.++.-.-..++..++-......
T Consensus 351 ~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 351 PSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred cchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 111222222333333445556667777888899999999888888877777666555443
No 208
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.21 E-value=6.4e-10 Score=108.01 Aligned_cols=135 Identities=17% Similarity=0.080 Sum_probs=108.2
Q ss_pred hhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-cchHHHHHHHHHHHHHHhhhhhccccchHHHHH
Q 009978 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (521)
Q Consensus 116 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 194 (521)
.......|.+.++.|.+..+.+.+.+...++..++.++.|++.||+ +||+.+.++.++.+++.+++.+. ++.....
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~- 290 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFA--PMHGLWA- 290 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHH-
Confidence 3444567777788899999999999999999999999999999999 56667777878787777766665 3322222
Q ss_pred HHHHHhhhhcchhhHHHHHHHhcCC-chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 195 MRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 195 ~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
..++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+++.++.|
T Consensus 291 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 291 WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567899999888888777766554 5667899999998899999999999999998776
No 209
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.20 E-value=1.9e-09 Score=106.75 Aligned_cols=157 Identities=14% Similarity=0.027 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc
Q 009978 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
.......-+|.+.++ +|.+..+.++..+.+.++..++.++.|+++||+|||+ ++..+..+.++..+....
T Consensus 31 ~~~~~~p~l~~i~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~---------~l~~~~~~~~~~~~~~~~ 100 (413)
T PRK15403 31 TTDLIQPGIINVVRD-FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRP---------VLITGALIFTLACAATLF 100 (413)
T ss_pred HHHhhccCHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH---------HHHHHHHHHHHHHHHHHH
Confidence 334444455555444 8999999999999999999999999999999999992 333344444444444444
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Q 009978 419 AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL 497 (521)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (521)
.++.+..++.-++.+...+...+.......+..| ++++++.++.+....++..+||.+++.+.+..| |+..|++.+++
T Consensus 101 a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~~~~ 179 (413)
T PRK15403 101 TTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAIIAVM 179 (413)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHH
Confidence 5555544444333222223333444556666766 578999999999999999999999999998877 99999988887
Q ss_pred HHHHHHHHH
Q 009978 498 YFLSALFYI 506 (521)
Q Consensus 498 ~~~~~~~~~ 506 (521)
.+++.+..+
T Consensus 180 ~~i~~~~~~ 188 (413)
T PRK15403 180 GLIAFVGLL 188 (413)
T ss_pred HHHHHHHHH
Confidence 776665443
No 210
>PRK09848 glucuronide transporter; Provisional
Probab=99.19 E-value=7.1e-10 Score=111.24 Aligned_cols=138 Identities=19% Similarity=0.146 Sum_probs=109.4
Q ss_pred hhhhhhhhhhh-hhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHH
Q 009978 117 VMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (521)
Q Consensus 117 ~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 195 (521)
......|.+.+ .+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+....+++.+++.
T Consensus 246 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 246 AVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred HHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 34444555544 46766655555555556778889999999999999999999999988888777766533467777778
Q ss_pred HHHHhhhhcchhhHHHHHHHhcCCch-------hhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 196 RAVVGLAEGVALPAMNNMVARWFPQT-------ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 196 r~l~G~g~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
.++.|+|.+...+...++.+|..|.+ ++|..+|+.+....+|..+|+.+.+.+.+..|+
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88999999999999999999988754 358999999999999999999999998876665
No 211
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.17 E-value=6.2e-10 Score=108.56 Aligned_cols=185 Identities=16% Similarity=0.113 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHH
Q 009978 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 177 (521)
+.....+.+......-..+........+.++-|++..+..++.....+...+..+++..+.||+|||+.++.+..++.+.
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 33333434444444444456667777888999999999999999999999999999999999999999999999998888
Q ss_pred Hhhhhhcc--ccch--H---HHHHHHHHHhhhhc-chhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhh
Q 009978 178 TFLTPWAA--DTSL--L---ALLAMRAVVGLAEG-VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (521)
Q Consensus 178 ~~l~~~~~--~~~~--~---~l~~~r~l~G~g~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 249 (521)
.+++.... .... | ..+++.++..++.+ +..|...-+.+|.+|++.|..++++......+...+-...-..+.
T Consensus 349 ~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~ 428 (485)
T KOG0569|consen 349 LLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQ 428 (485)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77655431 0111 1 12333344333333 236788999999999999999999999988888888777777777
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 009978 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRH 283 (521)
Q Consensus 250 ~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~ 283 (521)
+.+|- +.|+...+.+++..+..++..||++.+.
T Consensus 429 ~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 429 NVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 77776 7888888888888888888888876543
No 212
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.17 E-value=5.8e-08 Score=92.43 Aligned_cols=324 Identities=12% Similarity=0.091 Sum_probs=174.3
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHh
Q 009978 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVAR 216 (521)
Q Consensus 137 g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 216 (521)
+.+.-+-.+...+..+.+-++.+|+..+.=..+..+++.++.++.+++ ++.+.=+++-++.+++.|........+..
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~--~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS--PSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec--cchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 446666777888888889999999886665666677888899998988 89998889999999999987777777644
Q ss_pred cCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc--hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHH
Q 009978 217 WFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI--FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYI 294 (521)
Q Consensus 217 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw--~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (521)
.+++ ...+-++.+.+.++++|+..-..+.+ .|+ |..+++...+.++..+..++..+.++...+..+.++.+..
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~ 213 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEA 213 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcc
Confidence 5543 35788888888888999887766655 554 7778887777666555555555443322211111100000
Q ss_pred HHhhccccccCCCCCCCCCCchHHHHHh-cchHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHhCCCcccchhHhHHHHH
Q 009978 295 LREKQKPLLMGNKHKPATVIPPFRRLLS-KMPTWSIIVANAMHSWGFFVILS-WMPIYFN-FVYHIDLRQASWFSAVPWS 371 (521)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~-~~~g~~~~~~~~~~~~~~~ 371 (521)
.++.... +..+.+.+......+++-++ -|.++...+-.++.++..+.++. ..+...- ....-...+..++...+.+
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~ 292 (402)
T PF02487_consen 214 EDDLLES-ETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQL 292 (402)
T ss_pred ccccccc-ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHH
Confidence 0000000 00001111111222222221 12222233333344444443322 1222211 1111112234455555666
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHH---HHhccchhHHHHHHHHH-HHHHHhhhhhhhHHHH
Q 009978 372 VMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI---GLTAAKSPVMASAWLTL-AIGMKSFSHSGFLVNL 447 (521)
Q Consensus 372 ~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 447 (521)
+..+++--...+ |+ | +.++..+.-.+-.+.++ .+.+.++.|..++.++. |...+.........+.
T Consensus 293 GVFISRSS~~~~--ri--r-------~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~ 361 (402)
T PF02487_consen 293 GVFISRSSLPFF--RI--R-------RLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRIS 361 (402)
T ss_pred HHhhhhcceeee--eh--h-------hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 655555322221 22 1 11222111111111111 11122344444333333 4444444445555666
Q ss_pred HhhhccchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 009978 448 QEIAPQYSGVLHGISNTAGTFAAILGTVGAGFF 480 (521)
Q Consensus 448 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 480 (521)
.+..+++|-.++|.......+|..++..++-.+
T Consensus 362 ~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 362 EEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred hcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 677778999999999988888888777665443
No 213
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.16 E-value=8.4e-10 Score=103.81 Aligned_cols=278 Identities=16% Similarity=0.133 Sum_probs=160.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH----hcchHHHH-HHHHHHHHHH
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKIIMA-WGVALWSLAT 178 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr----~Grr~~~~-~~~~~~~~~~ 178 (521)
++...+..-+.+..-....+++.+++|++....+.+-.+..+...+.+++.|..+|| |||||.++ .+.+...++.
T Consensus 37 v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l 116 (498)
T KOG0637|consen 37 VASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSL 116 (498)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHH
Confidence 333333334444455566788889999999999999888889999999999999996 78877654 4556666666
Q ss_pred hhhhhcc--------cc-------chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHH-HHHHHHhhhhhhhHHHH
Q 009978 179 FLTPWAA--------DT-------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERAR-AVAIAMGGFTSGNAIGL 242 (521)
Q Consensus 179 ~l~~~~~--------~~-------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~~g~ 242 (521)
++..++. .. ....++++--+.=++.-.....+.+++.|...++++.+ +++.+....++|..+|.
T Consensus 117 ~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY 196 (498)
T KOG0637|consen 117 FLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGY 196 (498)
T ss_pred hhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeee
Confidence 6666651 00 12223444444445555777889999999997776666 99999999999999999
Q ss_pred HHHHHhhhccCchh--HHHHHHHHHHHHHHHHH-------HhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCC
Q 009978 243 VLSPILMSQAGIFG--PFVIFGLSGFLWVLVWL-------SATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATV 313 (521)
Q Consensus 243 ~l~~~l~~~~gw~~--~f~~~~~~~~i~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (521)
.+++++ +|+- .|...-.+.+.+..+-. +...++-+......+.+......+. +.+..+...
T Consensus 197 ~~g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~------~~~~~~~~~ 266 (498)
T KOG0637|consen 197 ALGSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTA------RSKSSKLPF 266 (498)
T ss_pred eccccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccc------cccccCcch
Confidence 888744 4432 22222111111111111 1111110000000000000000000 000000000
Q ss_pred C-chHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCccc----------------chhHhHHHHHHHH
Q 009978 314 I-PPFRRLLS-KMPTWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQ----------------ASWFSAVPWSVMA 374 (521)
Q Consensus 314 ~-~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~----------------~~~~~~~~~~~~~ 374 (521)
. +....+.+ .|..+.+++...+.+.+.+.+..|...++-+ .++-++.. -.+-+.+..+...
T Consensus 267 ~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lg 346 (498)
T KOG0637|consen 267 LLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLG 346 (498)
T ss_pred HHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHH
Confidence 1 11112222 3568888899999998888888777777654 34433321 1233445556666
Q ss_pred HHHHHHHHHHHHHHhcC
Q 009978 375 FTGYLGGLLSDMLIQRG 391 (521)
Q Consensus 375 i~~~~~g~l~dr~~~~~ 391 (521)
+-+....++.+|+|.|+
T Consensus 347 i~S~~~~~l~~~~g~r~ 363 (498)
T KOG0637|consen 347 IYSLLVEKLSRKFGTRK 363 (498)
T ss_pred HHHHHHHHHHHhcCcce
Confidence 77788888889988553
No 214
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.16 E-value=6.9e-09 Score=94.97 Aligned_cols=362 Identities=13% Similarity=0.061 Sum_probs=204.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHh-----HhcchHHHHH-H
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-----YYGGKIIMAW-G 170 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~d-----r~Grr~~~~~-~ 170 (521)
....+..+.+.+.+.+.-..... .+|.+.+.-|.|.++.+...-++ ..+ ..-++|.++.| |+||||.-++ +
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay-~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY-WPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh-hHH-HHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 34455566667777887777777 89999888888888777654332 233 23678899999 9999985332 2
Q ss_pred HHHHHHHHhhhhhcc---------ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHH
Q 009978 171 VALWSLATFLTPWAA---------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (521)
Q Consensus 171 ~~~~~~~~~l~~~~~---------~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 241 (521)
..+.+..+.+.+.-. .++...+...-++.-+..+....+...+.-.+..+++.|.+......+.+.|..++
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 233322222222211 13444444455667777788888999999889888999999888888888888877
Q ss_pred HHHHHHhhh-------ccCch---------hHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccC
Q 009978 242 LVLSPILMS-------QAGIF---------GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMG 305 (521)
Q Consensus 242 ~~l~~~l~~-------~~gw~---------~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (521)
..+.-.+-. ..+|. ..+++.+.+.++.-.+..+..+|.+++.. + |
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~---~-e--------------- 246 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVD---E-E--------------- 246 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh---h-h---------------
Confidence 665433322 11222 23344455555554445554444333211 0 0
Q ss_pred CCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHH
Q 009978 306 NKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (521)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (521)
.+...+...+-++++++-|.+..+.......-.++.+-....+.-+.| +|++.++.+++..+..-..++. ++...
T Consensus 247 ~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l----~~~~g 321 (510)
T KOG3574|consen 247 LELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIAL----PLYIG 321 (510)
T ss_pred hhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhh----hhhhe
Confidence 000111122345677788888887777777778888888888888888 7999998887754433334444 44433
Q ss_pred HHHhcCCCc-chhHHHHHHHHHHHHHHHHHHHh-cc-c---h-hHHHHHHH----HHHHHHHhhhhhhhHHHHHhhh-cc
Q 009978 386 MLIQRGTSV-TLTRKILQSIGFIAPGIALIGLT-AA-K---S-PVMASAWL----TLAIGMKSFSHSGFLVNLQEIA-PQ 453 (521)
Q Consensus 386 r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~-~---~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~ 453 (521)
|+......+ ...+....-+........+..+. .. . . +....+.. .+..++.........+..+++. |.
T Consensus 322 k~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~ 401 (510)
T KOG3574|consen 322 KWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPA 401 (510)
T ss_pred eecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcc
Confidence 332211111 11111111122222222222211 11 1 0 11111111 1222222222222233333444 46
Q ss_pred chhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 454 YSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 454 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
..|+.+.+.++..++|+-.-..+..++.|..+
T Consensus 402 iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 402 IGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 88999999999999999988888888888543
No 215
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.16 E-value=7.2e-10 Score=103.70 Aligned_cols=148 Identities=16% Similarity=0.165 Sum_probs=127.2
Q ss_pred hhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhh
Q 009978 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGL 201 (521)
Q Consensus 122 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~ 201 (521)
...-..++|++..++.++.-...+..+++++++|+|.||+|.|+++.++.++..+.++...+. ..-..+.++..+.|+
T Consensus 276 ~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~--~~~~~f~i~gll~g~ 353 (438)
T COG2270 276 GVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL--EGELDFWILGLLVGT 353 (438)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc--cccHHHHHHHHHHHH
Confidence 334455899999999999999999999999999999999999999999999998888776666 556667777889999
Q ss_pred hhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-chhHHHHHHHHHHHHHHH
Q 009978 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLV 271 (521)
Q Consensus 202 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-w~~~f~~~~~~~~i~~i~ 271 (521)
..|..+..+.++..+..|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+....++.++.+++
T Consensus 354 s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 354 SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 9999999999999999999999999999999999999999999999987655 666666665555444443
No 216
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.15 E-value=3.9e-09 Score=103.52 Aligned_cols=176 Identities=11% Similarity=0.033 Sum_probs=109.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHH
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (521)
|.++...+.....+...+.+....+.+-++.+|++..+.+++.++..++..+.++..|++.||+|.| .+..
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R---------~v~~ 104 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR---------RWTV 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHH
Confidence 4566666665555555555656566655545999999999999999999999999999999999998 2333
Q ss_pred HHHHHHHHHHHHHhcc-----chhHHHHHHH-HHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHH
Q 009978 404 IGFIAPGIALIGLTAA-----KSPVMASAWL-TLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVG 476 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~ 476 (521)
.+.+...+..+..... ++.+.+++.- +.+.+ +...+.....+++.+| ++||++.|+....+++|..+++++
T Consensus 105 ~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig--g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 105 FSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA--GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH--HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence 3333333443333332 3444333333 33332 4455556666677676 589999999977777777666555
Q ss_pred HHHHh-----hccc------------chHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 477 AGFFV-----ELVG------------SFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 477 ~g~l~-----~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
...+. +..| +++.+.++...+.++..++.++..+
T Consensus 183 ~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 183 APLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 54433 2222 1445555555555555555554433
No 217
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.13 E-value=1.3e-09 Score=94.84 Aligned_cols=352 Identities=13% Similarity=0.064 Sum_probs=185.8
Q ss_pred hhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009978 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (521)
Q Consensus 117 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 196 (521)
..++..-.+-+.++....++|.+.-+......+.+.+.|-++|+-|||+..+.-.+.+.++++- -.+ +.|-.++++|
T Consensus 55 LQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhS--pqYkVLmVGR 131 (454)
T KOG4332|consen 55 LQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHS--PQYKVLMVGR 131 (454)
T ss_pred hcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcC--CceEEEeehh
Confidence 4556666677888999999999988888888889999999999999999766555555444332 233 7899999999
Q ss_pred HHHhhhhcchhhHHHHHH-HhcCCchhhHHHHHHHH--------hhhhhhhHHHHHHHHHhhhcc--CchhHHHHHHHHH
Q 009978 197 AVVGLAEGVALPAMNNMV-ARWFPQTERARAVAIAM--------GGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSG 265 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i-~~~~~~~~r~~~~~~~~--------~~~~~g~~~g~~l~~~l~~~~--gw~~~f~~~~~~~ 265 (521)
++-|+..+..+.+..++. .|.. ++|+.-.-+.. .+..+-.+++.+.+..+.+.+ |.-.+|-..+++.
T Consensus 132 ~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfL 209 (454)
T KOG4332|consen 132 VLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFL 209 (454)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHH
Confidence 999999998888887754 4443 33332222211 233344455555555666654 4455666555554
Q ss_pred HHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHH-H
Q 009978 266 FLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI-L 344 (521)
Q Consensus 266 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~ 344 (521)
.+...+.+.-..|.-.++ .|.+.... +.+...+.+..++++.++..+..+.-...+.+ .
T Consensus 210 aigmAvil~~W~ENygdp-----s~~kdllt---------------qf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVF 269 (454)
T KOG4332|consen 210 AIGMAVILSSWSENYGDP-----SENKDLLT---------------QFKGAARAIASDEKIALLGAIQSLFEGSMYTFVF 269 (454)
T ss_pred HHHHHHHHhhhhhccCCh-----hhhHHHHH---------------HhhHhHHHHhcchHHHHHHHHHHHHhhhhheeee
Confidence 444333333222221111 11111111 11123345566666666555544444433333 3
Q ss_pred HHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhcc-----
Q 009978 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA----- 419 (521)
Q Consensus 345 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 419 (521)
.|.|..--+..+ .--|++++-+.++.++|+-+..++..|-..+ .-.. ..+........+.+..+...
T Consensus 270 LWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~---ve~y--mqivf~vs~a~l~Lpilt~~vsP~k 341 (454)
T KOG4332|consen 270 LWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPK---VESY--MQIVFLVSIAALLLPILTSSVSPSK 341 (454)
T ss_pred eecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcc---cchH--HHHHHHHHHHHHHHHHHHhccCCCc
Confidence 344432211111 1246777777777777776665555443322 1111 11111111112222222111
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc-chhhHHhHHHHHHHHHHHHHHHHHHHHhhc--ccchHHHHHHHHH
Q 009978 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGISNTAGTFAAILGTVGAGFFVEL--VGSFQGFLLLTSL 496 (521)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~~ 496 (521)
.++...++.+++.-.+.+..+|.+.-.-.+..|+ .|++.+.++..--++-.-++-.. .=.+. .+ -...|-++..
T Consensus 342 es~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLyn--lh~~~~p~~-tr~mf~icS~ 418 (454)
T KOG4332|consen 342 ESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFPTT-TRNMFGICSA 418 (454)
T ss_pred CCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee--cccccCccc-cchhhhhhHH
Confidence 2233344455555556667777776666666674 78776665544333322221110 00111 11 3456666666
Q ss_pred HHHHHHHH
Q 009978 497 LYFLSALF 504 (521)
Q Consensus 497 ~~~~~~~~ 504 (521)
...++.+.
T Consensus 419 ~~~~a~i~ 426 (454)
T KOG4332|consen 419 FLFVASIL 426 (454)
T ss_pred HHHHHHHH
Confidence 66555443
No 218
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.11 E-value=1.3e-08 Score=100.37 Aligned_cols=170 Identities=11% Similarity=0.066 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHH
Q 009978 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (521)
Q Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (521)
++.+++..+...+.........|.+ ++.+|.+..+.+++.+...++..++++..|++.||+|+| ..+..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r---------~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK---------AGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHH
Confidence 4455556666665655556777766 455899999999999999999999999999999999998 333444
Q ss_pred HHHHHHHHHHHhc---cchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHh
Q 009978 406 FIAPGIALIGLTA---AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (521)
Q Consensus 406 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 481 (521)
..+.++..+.+.. .++.+..+...++.+...+...+....+..+..| +++++..++.+....+|..++|.+.+.+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444433221 2344444444444333344444555555555555 68899999999999999999999998885
Q ss_pred hcc-------------------------cchHHHHHHHHHHHHHHHHHH
Q 009978 482 ELV-------------------------GSFQGFLLLTSLLYFLSALFY 505 (521)
Q Consensus 482 ~~~-------------------------g~~~~~~~~~~~~~~~~~~~~ 505 (521)
... .+++..|++.+++.++..++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 137778877777665554444
No 219
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.11 E-value=1.7e-09 Score=121.90 Aligned_cols=146 Identities=17% Similarity=0.188 Sum_probs=122.3
Q ss_pred hhhhhh-hhhhhcCCcc-hhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009978 119 SVAIVP-LSLAHGWSRS-FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (521)
Q Consensus 119 ~~~~~~-~~~~~~~s~~-~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 196 (521)
...+|. +.+.+|.+.. +.|++.+...++.+++++++|++.||+++++++.++.++.+++.++..+. .+.+.+++..
T Consensus 252 ~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 329 (1146)
T PRK08633 252 QANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--PSLASVLVLF 329 (1146)
T ss_pred HHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--hhHHHHHHHH
Confidence 334444 4566899998 99999999999999999999999999999999998888888888887777 7888888889
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh-ccCchhHHHHHHHHHH
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGIFGPFVIFGLSGF 266 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gw~~~f~~~~~~~~ 266 (521)
++.|++.+...+...+++.+..|+++|++++++.+....+|.++++.+++.+.. .+++...|++.+.+.+
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 999999998888999999999999999999999999999999888888877654 2345556666555443
No 220
>PRK10133 L-fucose transporter; Provisional
Probab=99.11 E-value=5e-09 Score=104.31 Aligned_cols=141 Identities=11% Similarity=0.106 Sum_probs=113.3
Q ss_pred hhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcc
Q 009978 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (521)
Q Consensus 126 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~ 205 (521)
.+.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+. ++.+ .+..-++.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA--GGHV-GLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc--CChH-HHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999988887777666665555 4432 34556789999999
Q ss_pred hhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-chhHHHHHHHHHHHHHHH
Q 009978 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLV 271 (521)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-w~~~f~~~~~~~~i~~i~ 271 (521)
.+|...+...+..|+ +.+.+.++... ..+|..++|++.+.+.+..| -|..|++..+..+..++.
T Consensus 364 i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 364 QYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 999999999999864 56777777764 44788889999999999887 788888766655444433
No 221
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.09 E-value=1.7e-09 Score=109.10 Aligned_cols=173 Identities=14% Similarity=0.074 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHH--------HHHH
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM--------AWGV 171 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~--------~~~~ 171 (521)
+....+..+........+...+|.+. +.+|.+..+.|++.++..++..++.++.|+++||+++|+.. ..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 342 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGI 342 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 33444444555544455555667664 55899999999999999999999999999999998754321 1111
Q ss_pred HHH--HHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhh
Q 009978 172 ALW--SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (521)
Q Consensus 172 ~~~--~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 249 (521)
... ++..+..... ..+....++.-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+.
T Consensus 343 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 343 GGLGPGIFAYALPYL-SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred HHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 111 1111111111 1334444444455555555545555555667775 58999999999999999999999999887
Q ss_pred hcc---CchhHHHHHHHHHHHHHHHHHHh
Q 009978 250 SQA---GIFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 250 ~~~---gw~~~f~~~~~~~~i~~i~~~~~ 275 (521)
+.. +|+..|.+.++..++..++....
T Consensus 421 ~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 421 SQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 643 38888888888777766555443
No 222
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.08 E-value=1.8e-08 Score=97.21 Aligned_cols=159 Identities=12% Similarity=0.030 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHhCCCccc-chhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccch
Q 009978 343 ILSWMPIYFNFVYHIDLRQ-ASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (521)
Q Consensus 343 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
...+...++.+.+|++..+ .|.+.+.+..+..+..+.+|++.||+|.| .++..+.+.-++...+....++
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666679999999 99999999999999999999999999998 3445555555555555555544
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc--chHHHHHHHHHHH
Q 009978 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG--SFQGFLLLTSLLY 498 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~ 498 (521)
...+.+.=++.+...+... ....++....| ++|+++.|+.+....+|.++++++.+.+. ..| .|....++.....
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHH
Confidence 4444444333333333334 55555555555 79999999999999999999999999944 445 2344455555556
Q ss_pred HHHHHHHHHhccCc
Q 009978 499 FLSALFYIIFSTGE 512 (521)
Q Consensus 499 ~~~~~~~~~~~~~~ 512 (521)
.++.++.+++++.+
T Consensus 193 ~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 193 TFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHhCCCCc
Confidence 66666666665433
No 223
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.07 E-value=6.2e-09 Score=105.04 Aligned_cols=142 Identities=13% Similarity=-0.012 Sum_probs=108.8
Q ss_pred hhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhh---ccccch
Q 009978 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW---AADTSL 189 (521)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~---~~~~~~ 189 (521)
..........+.+.+....+....+++.+...++..++.++++++.||+|+|+.+.++.++.+++.+...+ ....+.
T Consensus 245 ~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (473)
T PRK10429 245 IASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNA 324 (473)
T ss_pred HHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhH
Confidence 33344445555665554445667777877777889999999999999999999998888776666554332 222566
Q ss_pred HHHHHHHHHHhhhhcchhhHHHHHHHhcCCc-------hhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 190 LALLAMRAVVGLAEGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 190 ~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
+.+++.-++.|++.+...+...++++|..|. ++.|..++......-+|..+++.+.+++.+..|+
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7777788889999999899999999999762 3346689999999999999999999999876665
No 224
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=99.06 E-value=5.4e-09 Score=94.54 Aligned_cols=351 Identities=13% Similarity=0.091 Sum_probs=220.4
Q ss_pred HHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHH
Q 009978 147 YLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARA 226 (521)
Q Consensus 147 ~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~ 226 (521)
+.+.-.+.=.+.|-.-.|+++++-.+.......+..+. ++.+.+=+.-++.|...+. ..+.++++-...+++++.++
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g--~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrv 131 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG--PSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRV 131 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhc--CCchheeeehhhcChHHHH-HHhhhheeeeecCHHHHHHH
Confidence 34444455568999999999888777777777777777 8999999999999988654 77889999999999999999
Q ss_pred HHHHHhhhhhhhHHHHHHHHHhhhccCchh--HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHhhcccccc
Q 009978 227 VAIAMGGFTSGNAIGLVLSPILMSQAGIFG--PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLM 304 (521)
Q Consensus 227 ~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~--~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (521)
.+...+..-.|..+|..++..++..-.+.. .=.+.-....+..++.+ +.|..++..-...+++ +....+.++.
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~-fLP~v~rSl~f~~~~~-~~~v~~~e~~--- 206 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLAL-FLPRVKRSLYFHRLED-KISVGDLEEM--- 206 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHh-hCCCCchhhhhhcccc-cceeccchhc---
Confidence 999999999999999999998876543332 22222222222223333 3344332211111111 0000000000
Q ss_pred CCCCCCC--------CCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccchhHhHHHHHHHHH
Q 009978 305 GNKHKPA--------TVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY-HIDLRQASWFSAVPWSVMAF 375 (521)
Q Consensus 305 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~i 375 (521)
..+.+.. ...+++....+||.++...+-..+...+++.+..+....-++.. .-....-|..-++..+.+++
T Consensus 207 ~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~ 286 (433)
T KOG3810|consen 207 NPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAI 286 (433)
T ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHH
Confidence 0000000 11224556677899888888888888888888888887777742 11112234455566677778
Q ss_pred HHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhh-HHHHHhhhccc
Q 009978 376 TGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGF-LVNLQEIAPQY 454 (521)
Q Consensus 376 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 454 (521)
+.+..|.+--++.|+ +..++.++.+..+..++.+....+.|...+..++.-....+..+.. ..+..++..+.
T Consensus 287 ~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~ 359 (433)
T KOG3810|consen 287 AALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSEL 359 (433)
T ss_pred HHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh
Confidence 888888886665555 3456666677777777777777777777776666555444443333 34445555677
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHhhccc----------chHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 009978 455 SGVLHGISNTAGTFAAILGTVGAGFFVELVG----------SFQGFLLLTSLLYFLSALFYIIFSTGERVN 515 (521)
Q Consensus 455 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (521)
-|-.+|+..++.-+-..+-.. .+.|..| -|..-|++.+++.+++..+.....++.+.+
T Consensus 360 ~gLvFGiNTFvAl~lQsilT~---iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~~~~ 427 (433)
T KOG3810|consen 360 FGLVFGINTFVALILQSILTL---IVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRNKVP 427 (433)
T ss_pred heeeeehHHHHHHHHHHhheE---EEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 888888877665544443332 3344222 355678888888888877665555554444
No 225
>PRK09669 putative symporter YagG; Provisional
Probab=99.05 E-value=4.4e-09 Score=105.36 Aligned_cols=134 Identities=9% Similarity=0.103 Sum_probs=100.6
Q ss_pred hhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHh
Q 009978 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (521)
Q Consensus 121 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G 200 (521)
..+++.++.--++...+.+.....++..++.+++++++||+|+|+.+..+.++.++..+...+...++.+.+++..++.|
T Consensus 251 ~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 330 (444)
T PRK09669 251 ATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFN 330 (444)
T ss_pred hhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 33444443322334445566677788888999999999999999999888776665443332322256777888889999
Q ss_pred hhhcchhhHHHHHHHhcCCch-------hhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 201 LAEGVALPAMNNMVARWFPQT-------ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 201 ~g~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
++.+...+...++++|..+.+ +.|..++..+....+|..+|+.+++.+.+..|+
T Consensus 331 ~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 331 FIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999988632 346678899999999999999999999887766
No 226
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.05 E-value=7.5e-09 Score=91.03 Aligned_cols=171 Identities=15% Similarity=0.114 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH-HHH
Q 009978 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL-WSL 176 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~-~~~ 176 (521)
.+++.++++.+....+.... ..-..+.+.+|+|+...+.+.+....-.++.+++.|.++||+|++...+.+..+ ..+
T Consensus 266 fw~~~iicv~yyva~fPFi~--lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~ 343 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFIT--LGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLL 343 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhh--hhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHH
Confidence 34455555555444443222 223346788999999999999988888899999999999999999776655444 334
Q ss_pred HHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC---
Q 009978 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--- 253 (521)
Q Consensus 177 ~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g--- 253 (521)
+-....+. .+.=+++..+.|+............++...|+++.|.+.|..+...++|..+.|++++.+.+.-|
T Consensus 344 ~H~~l~Ft----~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 344 GHSGLFFT----FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred HhhhHHhh----hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 44443332 33335566777888776555567788889999999999999999999999999999999998654
Q ss_pred chhHH-HHHHHHHHHHHHHHHH
Q 009978 254 IFGPF-VIFGLSGFLWVLVWLS 274 (521)
Q Consensus 254 w~~~f-~~~~~~~~i~~i~~~~ 274 (521)
|--+| ++.+.+++....+.+.
T Consensus 420 ~le~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 420 NLEAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHHhh
Confidence 43334 3344444444433333
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.05 E-value=4.6e-09 Score=104.68 Aligned_cols=151 Identities=16% Similarity=0.095 Sum_probs=123.8
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhc
Q 009978 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~ 184 (521)
.+..++............+++.++.--++...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHH
Confidence 33344444555555666667666643344678888889999999999999999999999999999999999999988887
Q ss_pred cccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCch-------hhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCch
Q 009978 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT-------ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (521)
Q Consensus 185 ~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~ 255 (521)
..++.+.+++..++.|++.+...+...++++|..+.+ +.|..+|..+....+|..+++.+.+.+.+..|+.
T Consensus 311 ~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 311 GPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 3248999999999999999999999999999998743 3588999999999999999999999888766543
No 228
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.04 E-value=1.7e-09 Score=105.19 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=98.5
Q ss_pred hhhhhhhhhhhhhhhhhcCCcchhhHHHHHHH-HHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhcc--c---
Q 009978 113 ADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFL-WGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA--D--- 186 (521)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~-~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~--~--- 186 (521)
..........|.+.+++|.++.+.+.+.++.. ++..++.+++|++.||+|+|+.+..+.++.+++..+..+.. .
T Consensus 223 ~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 223 LGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 33334445566666679999999998888665 67789999999999999999999888888777666544321 0
Q ss_pred ----cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhh
Q 009978 187 ----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFT 235 (521)
Q Consensus 187 ----~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 235 (521)
++.+.+..+.++.+++.+...+...+++.|.+|+++||+.+|+.+...+
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 2456677788899999999999999999999999999999999887654
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.03 E-value=1.7e-09 Score=99.98 Aligned_cols=147 Identities=17% Similarity=0.143 Sum_probs=118.6
Q ss_pred hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 009978 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIG 434 (521)
Q Consensus 355 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (521)
.+-+..+.|++++...+.+++.+++.|.+.||+|+| ..+.+++..+......+.+.++.++.++.=.+-+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~---------ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK---------IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc---------cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 345667899999999999999999999999999999 56677888888888888888877765555444444
Q ss_pred HHhhhhhhhHHHHHhhhcc--chhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhccC
Q 009978 435 MKSFSHSGFLVNLQEIAPQ--YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (521)
...+......+...+.+|+ +|++++|+......+|..+||+++|.++|..| +...|+++++++++-..+.++.-+.
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCc
Confidence 4444455555666666663 68999999999999999999999999999998 9999999999988877776665444
No 230
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.01 E-value=3.5e-09 Score=96.69 Aligned_cols=131 Identities=18% Similarity=0.182 Sum_probs=98.9
Q ss_pred HHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchH--HHHHHHHHHhhhhcchhhHHHHHHHhcCCc
Q 009978 143 FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQ 220 (521)
Q Consensus 143 ~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 220 (521)
..+.-..|.++.+++.||+|||+.+..+.+++++..++......+|.. +++.+|++... .+.+.+.|..|.+|.
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg----~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG----AFQVAYVYTPEVYPT 465 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc----hheEEEEecCcccch
Confidence 345556788899999999999999999999999998877666333432 34556665543 355678899999999
Q ss_pred hhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 221 TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (521)
Q Consensus 221 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~ 279 (521)
.-|+...|..+.+..+|.++.|+++ +.....-..+..+.+.++++..+...+++-|+
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999999999999 33333444566667777777766666654443
No 231
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.01 E-value=2.3e-08 Score=112.45 Aligned_cols=185 Identities=15% Similarity=0.001 Sum_probs=114.9
Q ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCCC-cccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 319 RLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFN----FVYHID-LRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (521)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~g~~-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (521)
.+++++.++.+++..++..++.+.....++.+.. +..+.+ ....++..++..+..++.+++.|+++||+++|+..
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 5677888877777776666654433222222211 111111 13467777788888899999999999999998310
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHH
Q 009978 394 VTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAIL 472 (521)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~ 472 (521)
+.+............+.. ..++.+.+++..++.+...++..+...+++.+..+ ++++.++|+.++...+|.++
T Consensus 86 -----~~~~~~~~~~~~~~~~~~-~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~i 159 (1140)
T PRK06814 86 -----KILKFAEIGIAALAIYGF-HLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILL 159 (1140)
T ss_pred -----HHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHH
Confidence 011111122222222222 22445555555555454555566666667676666 68999999999999999999
Q ss_pred HHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 473 GTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 473 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
||.++|++.+..| +...|+..+++.+++.++.+.+++
T Consensus 160 gp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1140)
T PRK06814 160 GTIIGGLATISGN-FVILVALLMGIAVLGWLASLFIPK 196 (1140)
T ss_pred HHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999999999876 777775555555555444444443
No 232
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.00 E-value=1.2e-08 Score=84.13 Aligned_cols=133 Identities=15% Similarity=0.155 Sum_probs=90.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHH
Q 009978 366 SAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLV 445 (521)
Q Consensus 366 ~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (521)
.+...++..++.++.+++.||+++|+ ....+.....+..+.....++.+......++.....+...+....
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKP---------VLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhH---------HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 44556778889999999999999882 223333333333333333344444444434433334444555666
Q ss_pred HHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 446 NLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 446 ~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
...+..| ++|+++.++.+....++..++|.+.+.+.+..+ +...+.+.+.+.+++.+.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhc
Confidence 6667666 589999999999999999999999999998876 8788887777766666555444
No 233
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.00 E-value=4.3e-08 Score=90.01 Aligned_cols=162 Identities=17% Similarity=0.120 Sum_probs=130.1
Q ss_pred HhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-cchHHHHHHHHHHHHHHhhhhhccccch
Q 009978 111 CNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLTPWAADTSL 189 (521)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 189 (521)
..+..+....-+|.+..|.|+|..+.|++.+...+.....++..-.+++|. ++|+..+...+++.++.+.+.+.+.+++
T Consensus 220 qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~ 299 (395)
T COG2807 220 QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLP 299 (395)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 344445666679999999999999999999999999999999999999975 6777888888888888887777732232
Q ss_pred HHHHHHHHHHhhhhcchhhHHHHHHHhcCCc-hhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-chhHHHHHHHHHHH
Q 009978 190 LALLAMRAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFL 267 (521)
Q Consensus 190 ~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-w~~~f~~~~~~~~i 267 (521)
+.. .++.|+|.|..++.....+.+..++ ++-++-.++.+....+=..+||.+.|++-|..| |+......+...++
T Consensus 300 ~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~ 376 (395)
T COG2807 300 ILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLL 376 (395)
T ss_pred HHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHH
Confidence 222 4899999999999999999988754 445667777777777878899999999988664 99998888888777
Q ss_pred HHHHHHHh
Q 009978 268 WVLVWLSA 275 (521)
Q Consensus 268 ~~i~~~~~ 275 (521)
..+..+..
T Consensus 377 m~i~Gl~a 384 (395)
T COG2807 377 MLIFGLRA 384 (395)
T ss_pred HHHHHhhc
Confidence 76666554
No 234
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.98 E-value=4.5e-10 Score=105.96 Aligned_cols=177 Identities=13% Similarity=0.037 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHH
Q 009978 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (521)
Q Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (521)
...+.+...+...--+.+...++. .++.++.++...|++.....+...+.++++|++.||+.|++ ++.++
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~---------v~~vG 104 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR---------VIAVG 104 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcce---------EEeeH
Confidence 334444444444444444443333 33448999999999999999999999999999999999983 34444
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc-chhhHHhHHHHHHHHHHHHHHHHHHHHhhcc
Q 009978 406 FIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGISNTAGTFAAILGTVGAGFFVELV 484 (521)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 484 (521)
..+-..+.++-.+....|.+.++=.+.+.......+....++.+.+|+ +|++++++++....+|..+|-..++.+.+..
T Consensus 105 ~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 105 IFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 444444444444445556555554444444455667777888888885 9999999999999999999999999999988
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhccCc
Q 009978 485 GSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (521)
Q Consensus 485 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (521)
+.|++.|...+++.++..++.+++.++.
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 8899999999999888777766665443
No 235
>PTZ00207 hypothetical protein; Provisional
Probab=98.94 E-value=1.3e-07 Score=95.64 Aligned_cols=157 Identities=13% Similarity=0.089 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhc
Q 009978 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
..+.+..+.+.. ++.+|++..+.+.+.++.. ......++.|++.||+|+| .++.++.+...++.+....
T Consensus 42 ~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R---------~vllig~ll~~iG~ll~al 110 (591)
T PTZ00207 42 FMYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPR---------PIFVLSMTVFCLGTLLFAL 110 (591)
T ss_pred HHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHH
Confidence 344555666655 5558999999888876633 3345667789999999999 3444444444444443333
Q ss_pred c------chhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 009978 419 A------KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLL 492 (521)
Q Consensus 419 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 492 (521)
. .+.+.+.+..++.+...+...+.......+.+|++||.+.|+......+|.++.+.+...+.+. ++...|+
T Consensus 111 a~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl 188 (591)
T PTZ00207 111 TFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFF 188 (591)
T ss_pred HhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHH
Confidence 2 2334333333332322333334444455667899999999999999999998655555544442 3666777
Q ss_pred HHHHHHHHHHHHHHHh
Q 009978 493 LTSLLYFLSALFYIIF 508 (521)
Q Consensus 493 ~~~~~~~~~~~~~~~~ 508 (521)
+.+++.++..++.+.+
T Consensus 189 ~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 189 FLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7776666655554443
No 236
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.92 E-value=5.9e-08 Score=92.03 Aligned_cols=157 Identities=31% Similarity=0.495 Sum_probs=126.4
Q ss_pred HhhhhhhhhhhhhhhhhhhcCCc--chhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccc
Q 009978 111 CNADRVVMSVAIVPLSLAHGWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS 188 (521)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~ 188 (521)
............+.+..+++.+. .+.++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++..+....+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 14 LGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 33555566777888888877776 5889999999999999999999999999999888888876666666666661124
Q ss_pred hHHHHHHHHHHhhhhcchhhHHHHHHHhcCCc-hhhHHHHHHHHh-hhhhhhHHHHHHHHHhhhc--cCchhHHHHHHHH
Q 009978 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMG-GFTSGNAIGLVLSPILMSQ--AGIFGPFVIFGLS 264 (521)
Q Consensus 189 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~l~~~l~~~--~gw~~~f~~~~~~ 264 (521)
.+.+++.|+++|++.+...+...+++.++.|+ ++|+...+.... ...+|..+++.+++.+... .+||..|.+....
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 88999999999999999999999999999987 688999999888 5888889999887777654 5799866666655
Q ss_pred HHH
Q 009978 265 GFL 267 (521)
Q Consensus 265 ~~i 267 (521)
...
T Consensus 174 ~~~ 176 (338)
T COG0477 174 GLL 176 (338)
T ss_pred HHH
Confidence 443
No 237
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=1.4e-08 Score=93.35 Aligned_cols=125 Identities=16% Similarity=0.137 Sum_probs=96.0
Q ss_pred CCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 009978 357 IDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMK 436 (521)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (521)
.+....|++-+.+.+..++.++.+|.++||+||| .++.++++..++..+.+....+. ..++..=+.++..
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk---------pvll~c~~~va~s~ll~~~S~~F-~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK---------PVLLACLIGVALSYLLWALSRNF-AAFVLARFLGGIF 134 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch---------HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhc
Confidence 3456688999999999999999999999999999 56667777777777777776666 2222212233334
Q ss_pred hhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh---cccchHHHH
Q 009978 437 SFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE---LVGSFQGFL 491 (521)
Q Consensus 437 ~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~ 491 (521)
-.......+++.|+.+ |+|+.+++.+.+..++|.++||.++|++.+ ..|+|..++
T Consensus 135 kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~al 193 (451)
T KOG2615|consen 135 KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFAL 193 (451)
T ss_pred cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHH
Confidence 4445566777788776 699999999999999999999999999988 567665555
No 238
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.91 E-value=2e-05 Score=78.19 Aligned_cols=281 Identities=11% Similarity=-0.006 Sum_probs=163.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHH-HHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~-~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
..+..+..+.++.++..+..+..-..=..+.-. ...++.+..+=....+ +..+...+..++++++++.+++-+....+
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt-~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVT-AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 345556666666666555444333322221111 1255666666554444 34555777899999999999887766666
Q ss_pred HHHHhhhhhcc-------ccc----------------------hHHHHHHHHHHhhhhcchhh-HHHHHHHhcCCchhhH
Q 009978 175 SLATFLTPWAA-------DTS----------------------LLALLAMRAVVGLAEGVALP-AMNNMVARWFPQTERA 224 (521)
Q Consensus 175 ~~~~~l~~~~~-------~~~----------------------~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~ 224 (521)
.....++++.. +++ .|.+.+..++.-+-.....+ .-..+.+|.++.+|-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 65555544431 111 12222222333333233233 4688899999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHHhhh---------ccCchhHHHHHH----HHHHHHHHHHHHhcCCCCCCCCCCchhHH
Q 009978 225 RAVAIAMGGFTSGNAIGLVLSPILMS---------QAGIFGPFVIFG----LSGFLWVLVWLSATSSTPDRHPQISKYEL 291 (521)
Q Consensus 225 ~~~~~~~~~~~~g~~~g~~l~~~l~~---------~~gw~~~f~~~~----~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 291 (521)
|..+++..+.++|.+++..+..++.+ ...|...+.... +.+++...+.....++..+.+... +.+.
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-~~~~ 258 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-PSAK 258 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-hhhh
Confidence 99999999999999999999888877 123554332222 112222222222221111111100 0000
Q ss_pred HHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc----chhHhH
Q 009978 292 EYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFSA 367 (521)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~ 367 (521)
..++++++....++++.++++|.+..+.+...++....+.+....-..+++.+. ++.+ .|....
T Consensus 259 -----------~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~ 326 (491)
T PF03219_consen 259 -----------KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSS 326 (491)
T ss_pred -----------cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHH
Confidence 012233344556788889999999999888888888888887766667776443 3333 334455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 009978 368 VPWSVMAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 368 ~~~~~~~i~~~~~g~l~dr~~~~ 390 (521)
..++..++..++++.+.+|+|-+
T Consensus 327 ~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 327 WTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHH
Confidence 55666666667888888888876
No 239
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.91 E-value=3.6e-08 Score=94.71 Aligned_cols=182 Identities=14% Similarity=0.161 Sum_probs=135.3
Q ss_pred HHhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccchhHhHHHHHHHHHHHHHHHHHHHHH-HhcCCC
Q 009978 320 LLSK-MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYH----IDLRQASWFSAVPWSVMAFTGYLGGLLSDML-IQRGTS 393 (521)
Q Consensus 320 ~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-~~~~~~ 393 (521)
.+++ |.++.+...-+.--++++++...+..|+....+ +|.+++.-+.+.+....-+..+++||++||+ |+|
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~--- 92 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR--- 92 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh---
Confidence 3443 457777788888889999999999999998888 9999888888887777778889999999997 555
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc--c-chhhHHhHHHHHHHH
Q 009978 394 VTLTRKILQSIGFIAPGIALIGLTAAK--SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--Q-YSGVLHGISNTAGTF 468 (521)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~g~~~g~~~~~~~~ 468 (521)
..+..+.++..++.+.+...+ ....+.+.+.+.....+..=+....+..+..| + +|-..+++..+..++
T Consensus 93 ------~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi 166 (498)
T COG3104 93 ------RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI 166 (498)
T ss_pred ------HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh
Confidence 234455555566666555542 23333333333223334444555566666665 2 577888999999999
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhccC
Q 009978 469 AAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTG 511 (521)
Q Consensus 469 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (521)
|+.++|.+.+++.++.| |...|..+++-+..+.+.+++.++.
T Consensus 167 Gsl~~p~i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 167 GSLIAPIITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHccch
Confidence 99999999999999998 9999999999999999888877653
No 240
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.7e-07 Score=90.81 Aligned_cols=148 Identities=17% Similarity=0.110 Sum_probs=120.4
Q ss_pred HHHHHhhhhhhhhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhcc
Q 009978 107 ALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA 185 (521)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~ 185 (521)
..++.....+..+....++.+. +|.++.+..+.......+.+++.+++.++.+|+|+|+++.++.++.+++.++..+.+
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444444445555555555544 577777777888888888888899999999999999999999999999999988885
Q ss_pred ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCc-------hhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 186 ~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
.++.+.+++..++.++|.+...+...++++|..+- ++-|...+.+....=+|..++..+.++..+..|+
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56788899999999999999999999999998753 2347788888888889999999888888876653
No 241
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.87 E-value=1.1e-07 Score=94.13 Aligned_cols=176 Identities=13% Similarity=0.073 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHH----HHhcCCCcchhHHHH
Q 009978 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM----LIQRGTSVTLTRKIL 401 (521)
Q Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~~~~~~~~~~~~~~~ 401 (521)
+..+....+...+++.....+++.|+++ +|.++...+.+..+..+..++..++.|+++|| +|||+ ..
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr--------p~ 76 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR--------PF 76 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH--------HH
Confidence 3445555566667777778888988877 89999999999999999999999999999995 88882 23
Q ss_pred HHHHHHHHHHHHHHHhccchh-----------------HHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc-c--hhhHHhH
Q 009978 402 QSIGFIAPGIALIGLTAAKSP-----------------VMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-Y--SGVLHGI 461 (521)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~g~~~g~ 461 (521)
+..+.....+.+..+....+. +..+..+.+.-.......+...++..|..|+ + ++.+.++
T Consensus 77 il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~ 156 (477)
T TIGR01301 77 IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAY 156 (477)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHH
Confidence 333334444444444332221 1112222222233344445556677777773 3 3689999
Q ss_pred HHHHHHHHHHHHHHHHHHH--hhcc------------cchHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 462 SNTAGTFAAILGTVGAGFF--VELV------------GSFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 462 ~~~~~~~g~~~~~~~~g~l--~~~~------------g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
.+....+|..+|+.+++.. .+.. .++...|++.+++.+++.++..+..+
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~ 219 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK 219 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 9999999999999998875 2221 14677888888877777766655433
No 242
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.86 E-value=2.8e-08 Score=102.97 Aligned_cols=153 Identities=12% Similarity=0.074 Sum_probs=101.4
Q ss_pred HHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccc--------
Q 009978 349 IYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK-------- 420 (521)
Q Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 420 (521)
.-++++++++..+.|++.+...++.+++.++.+++.||.+|++.. .++.++.+++.++....+
T Consensus 57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i---------~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI---------GIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE---------EecHHHHHHHHHHHhChHHhcCCccc
Confidence 344555999999999999999999999999999999999988432 222222222222221110
Q ss_pred -----------------------------------------h--hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchh
Q 009978 421 -----------------------------------------S--PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSG 456 (521)
Q Consensus 421 -----------------------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g 456 (521)
+ ...+++.-++.+...+...+....++.|..| ++++
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 0 1112222222222233334455567777776 6899
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHhhcc---------------------cchHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 457 VLHGISNTAGTFAAILGTVGAGFFVELV---------------------GSFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 457 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
...|+.+....+|..+|+.++|++.+.. |.|+..|++.+++.++..+.++.+++
T Consensus 208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 208 LYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999999999999999999999988643 23666788877777666655555543
No 243
>PRK11462 putative transporter; Provisional
Probab=98.86 E-value=1.7e-07 Score=93.96 Aligned_cols=134 Identities=14% Similarity=0.125 Sum_probs=91.6
Q ss_pred hhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHh
Q 009978 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (521)
Q Consensus 121 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G 200 (521)
....+.+...-++...+.+.+.+.++.+++.+++++++||+|+|+++..+..+.++..++..+....+.+.+++.-++.|
T Consensus 250 ~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 329 (460)
T PRK11462 250 AMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIG 329 (460)
T ss_pred HhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Confidence 33344443333444556777788889999999999999999999987765554444333333332223334455556778
Q ss_pred hhhcchhhHHHHHHHhcCC-------chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCc
Q 009978 201 LAEGVALPAMNNMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (521)
Q Consensus 201 ~g~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 254 (521)
++.+...+...++++|..+ +++.|..++.......+|..+|+.+++.+.+..|+
T Consensus 330 ~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 330 VLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8877777777888888876 23345666777888999999999999988876555
No 244
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.82 E-value=7e-08 Score=96.86 Aligned_cols=136 Identities=13% Similarity=0.147 Sum_probs=114.5
Q ss_pred hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhcc--------ccchHHHHHHHHH
Q 009978 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA--------DTSLLALLAMRAV 198 (521)
Q Consensus 127 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~--------~~~~~~l~~~r~l 198 (521)
+.+|.++.++|++.....++..++....+++.+|++.|+++.++.++.+++.+...+.. .++.+.++..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 56899999999999999999999999999999999999999999999988875543110 0233455566788
Q ss_pred HhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC-----chhHHHHHH
Q 009978 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-----IFGPFVIFG 262 (521)
Q Consensus 199 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-----w~~~f~~~~ 262 (521)
.+++.+........++.+..|+++++..+++.+...++|..+++.+++.+.+..| .+..++...
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~ 429 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLIL 429 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHH
Confidence 8999888888999999999999999999999999999999999999999998777 554444433
No 245
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.81 E-value=3.4e-08 Score=94.93 Aligned_cols=152 Identities=16% Similarity=0.186 Sum_probs=134.8
Q ss_pred hhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhh
Q 009978 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGL 201 (521)
Q Consensus 122 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~ 201 (521)
+-.-.||.+..+...|........+-++.-++.+++.+|+|+-+++.+++.+..+=.+..... +|.|..+..-+++|+
T Consensus 394 LfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--~n~W~vLPieilqgi 471 (618)
T KOG3762|consen 394 LFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--QNPWMVLPIEILQGI 471 (618)
T ss_pred HHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--cCchheeeHHHHHHH
Confidence 334467788888888988888888888899999999999999999999999999888888888 999999999999999
Q ss_pred hhcchhhHHHHHHHhcCCchhhHHHHHHHH-hhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 009978 202 AEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 202 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~ 275 (521)
..+..+.+..+|+++..|++-|..+.++.+ ...++|-.+|.+++|.+.+.+|-|..|.+.++.+++.+++....
T Consensus 472 t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 472 THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999975 55679999999999999999999999999999888766655443
No 246
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.79 E-value=2.9e-07 Score=86.00 Aligned_cols=166 Identities=19% Similarity=0.220 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 177 (521)
+.+....+..|+......+....++.+.++ .|.+..+.+...+.+..+..+|.++..++..|+...|.+.+..++..+-
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill 315 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILL 315 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 334445556677777777777777777777 7889999999999999999999999999999999999999888887777
Q ss_pred HhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhH
Q 009978 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (521)
Q Consensus 178 ~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~ 257 (521)
++..++. ++...++ +-++.|+..+..+|...+...+..| +.....|..-.+..+|..+-|.+.|++.|..|-...
T Consensus 316 ~~~~~l~--~g~v~~~-~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~ 390 (422)
T COG0738 316 LLAVALI--GGVVALY-ALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLT 390 (422)
T ss_pred HHHHHHh--cChHHHH-HHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHH
Confidence 7777777 7755544 4578899999999999999999997 334455556666778999999999999999998888
Q ss_pred HHHHHHHHHHHH
Q 009978 258 FVIFGLSGFLWV 269 (521)
Q Consensus 258 f~~~~~~~~i~~ 269 (521)
+.....++.+.+
T Consensus 391 ~~~~pllc~lyV 402 (422)
T COG0738 391 FLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHH
Confidence 775555555544
No 247
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.78 E-value=0.00019 Score=69.33 Aligned_cols=281 Identities=10% Similarity=-0.020 Sum_probs=164.7
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cCCcchhhHHHHHHHH-HHHHhhhhhHHHHhHhcchHHHHHH
Q 009978 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAH---GWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWG 170 (521)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~s~~~~g~~~s~~~~-~~~i~~~~~G~l~dr~Grr~~~~~~ 170 (521)
+..+..+..+.+..++..+..+..- .+.+.+ ...++.+.++-+..-+ +..+..++.+++.+++.+.+++-+.
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~ 98 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLR----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 3345555555555555555443332 334444 3456677788777777 6678888899999999999998877
Q ss_pred HHHHHHHHhhhhhcc-------ccc-----------------------hHHHHHHHHHHhhhhcchhh-HHHHHHHhcCC
Q 009978 171 VALWSLATFLTPWAA-------DTS-----------------------LLALLAMRAVVGLAEGVALP-AMNNMVARWFP 219 (521)
Q Consensus 171 ~~~~~~~~~l~~~~~-------~~~-----------------------~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~ 219 (521)
...+....+++++.. +++ .|..-+..++.-+-...... .-.....|.+.
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 777766666666541 111 12222233333332233333 55678899999
Q ss_pred chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc-C---------chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchh
Q 009978 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-G---------IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKY 289 (521)
Q Consensus 220 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g---------w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 289 (521)
.+|-.|.+++++.+.+++..++..+..++..+. . -+..+.+.++.+++...+..+..+...+.+....+.
T Consensus 179 ~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~ 258 (509)
T COG3202 179 IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRA 258 (509)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHH
Confidence 899999999999999999999998888886522 1 233444444444444444444433222221110000
Q ss_pred HHHHHHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---chhHh
Q 009978 290 ELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ---ASWFS 366 (521)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~ 366 (521)
.. ..+.++.+-...++++.+.++|.++.+.+...+++.+.+.+....-.-.++.+....+. .+.+.
T Consensus 259 ~~-----------kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~ 327 (509)
T COG3202 259 KK-----------KKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQ 327 (509)
T ss_pred hc-----------ccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHH
Confidence 00 00122223345567888899999998888888888877777654444444433322222 23333
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhc
Q 009978 367 AVPWSV-MAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 367 ~~~~~~-~~i~~~~~g~l~dr~~~~ 390 (521)
...++. .++....++.+.+|.|-.
T Consensus 328 ~~tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 328 IWTGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhHH
Confidence 344444 333446677777777755
No 248
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.71 E-value=2e-07 Score=92.13 Aligned_cols=175 Identities=13% Similarity=0.061 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcc---------hHHHH
Q 009978 99 KVVSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG---------KIIMA 168 (521)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Gr---------r~~~~ 168 (521)
..++.+.+..+........+....|.+.++ +|.+..+.|++.++..+...+..+++|.++||.-+ |..-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 445666677777777777778888887665 89999999999999999999999999999999855 22334
Q ss_pred HHHHHHHHHHhhhhhccccch-HHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHH
Q 009978 169 WGVALWSLATFLTPWAADTSL-LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (521)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~~~~-~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 247 (521)
++....++..+..++....+. ..+.+.-+..++. |...+....-..|.. +++-+..+|+.+....+...++|.+.+.
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~-g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS-GFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc-ccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 455555566666666532122 2222222222222 333333444444444 5788999999999999999999999999
Q ss_pred hhh---ccCchhHHHHHHHHHHHHHHHHHHh
Q 009978 248 LMS---QAGIFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 248 l~~---~~gw~~~f~~~~~~~~i~~i~~~~~ 275 (521)
+.. ...|+.+|++.+++.++..++..++
T Consensus 416 ~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 416 IVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 984 2369999999999888877655544
No 249
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.71 E-value=1.2e-05 Score=77.53 Aligned_cols=374 Identities=10% Similarity=0.031 Sum_probs=191.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhh--hcCCcchhhHHHHHHHHHHHHhhhhhHHHHh-----HhcchHHHHHH-HHHH
Q 009978 103 MLALALALCNADRVVMSVAIVPLSLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-----YYGGKIIMAWG-VALW 174 (521)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~d-----r~Grr~~~~~~-~~~~ 174 (521)
++.+.+++.+.-.+.....+|.+.++ -+.|.+|.|...- ....+. .-++|.++.| |+||||.-++- -.+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSl-a~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSL-ASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeee-eechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 44556777776665555678888887 6888888776532 222222 2455666665 68999864432 2333
Q ss_pred HHHHhhhhhcc-----------------c---cc--hHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHh
Q 009978 175 SLATFLTPWAA-----------------D---TS--LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMG 232 (521)
Q Consensus 175 ~~~~~l~~~~~-----------------~---~~--~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 232 (521)
++..+..+... . ++ ...+...-++.=+-.+....++..+.-....+++++.+..-...
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 33222222111 0 11 11223333333344566667777888788888999988888888
Q ss_pred hhhhhhHHHHHHHHHhhh-----cc--------C---chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHH
Q 009978 233 GFTSGNAIGLVLSPILMS-----QA--------G---IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILR 296 (521)
Q Consensus 233 ~~~~g~~~g~~l~~~l~~-----~~--------g---w~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (521)
+.+.|..++..+.-.+-+ .+ | -..-..+.|.+.++..+...++.+|.|......+.+..+...+
T Consensus 162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~ 241 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDG 241 (544)
T ss_pred HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccc
Confidence 888888877766544422 11 1 1112233444445555555566666553322111000000000
Q ss_pred hhcc---ccccCC---CCCCCCC---CchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhH
Q 009978 297 EKQK---PLLMGN---KHKPATV---IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSA 367 (521)
Q Consensus 297 ~~~~---~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 367 (521)
+.+. +.+..+ +++.... -+.+.+++|-|.+..+++.....-.++..-..-...-+.| .|++.++.+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~l 320 (544)
T PF13000_consen 242 KSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVL 320 (544)
T ss_pred cccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHH
Confidence 0000 000000 0000111 1234456778888888888888888877777777777888 7999998776644
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcc--------------hhHH--------HHHHHHHHH---HHHH-HHH-Hhcc-
Q 009978 368 VPWSVMAFTGYLGGLLSDMLIQRGTSVT--------------LTRK--------ILQSIGFIA---PGIA-LIG-LTAA- 419 (521)
Q Consensus 368 ~~~~~~~i~~~~~g~l~dr~~~~~~~~~--------------~~~~--------~~~~~~~~~---~~~~-~~~-~~~~- 419 (521)
+ .+...++.|+++.|+.+.+.... ..|. .....++.. .++. ... ..+.
T Consensus 321 i----~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~ 396 (544)
T PF13000_consen 321 I----DFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPS 396 (544)
T ss_pred H----hhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCC
Confidence 4 45555666666666654322110 0000 111111111 1110 000 1111
Q ss_pred --chhHHHHHHHHHHHHHHhhhhh----hhHHHHHhh-hccchhhHHhHHHHHHHHHHHHHHHHHHHHhhc
Q 009978 420 --KSPVMASAWLTLAIGMKSFSHS----GFLVNLQEI-APQYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (521)
Q Consensus 420 --~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 483 (521)
..+...+..+++.-.+..+... ...+.-+++ .|..-|+.+.+.|++.++|+-.-..+.=++.|.
T Consensus 397 ~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 397 DGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 1112222222222222222222 222333333 357889999999999999998777776666663
No 250
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.70 E-value=2.2e-06 Score=86.31 Aligned_cols=151 Identities=17% Similarity=0.122 Sum_probs=102.0
Q ss_pred HHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHH
Q 009978 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVM 424 (521)
Q Consensus 345 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
..++.+..+ .|-+ ....++.....++..++.++.|+++|.+||| .+...+.++..++.+.....++...
T Consensus 65 ~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr---------~~~i~g~~l~vvG~Iv~atA~~~~~ 133 (599)
T PF06609_consen 65 SILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRR---------YFFIIGSLLGVVGSIVCATAQNMNT 133 (599)
T ss_pred HHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcch---------HHHHHHHHHHHhHHHHhhcCCcHHH
Confidence 444555555 6655 5567777888889999999999999999999 5666677777777777777777766
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 009978 425 ASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSAL 503 (521)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 503 (521)
.++...+.....+... .......|..| |.|+...++.....-.....++.+...+.... +|++.|++..+...++++
T Consensus 134 ~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~-~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHS-GWRWIFYIFIIWSGIALV 211 (599)
T ss_pred HHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCC-CcchHHHHHHHHHHHHHH
Confidence 6666555443333332 33444667777 68877776665554455556677766665544 599999998887777665
Q ss_pred HHHHh
Q 009978 504 FYIIF 508 (521)
Q Consensus 504 ~~~~~ 508 (521)
+.+++
T Consensus 212 l~~~f 216 (599)
T PF06609_consen 212 LIFFF 216 (599)
T ss_pred HHHHH
Confidence 54444
No 251
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.68 E-value=1.5e-06 Score=82.01 Aligned_cols=157 Identities=16% Similarity=0.072 Sum_probs=125.5
Q ss_pred hhhhhhhhhh-hhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHh-HhcchHHHHHHHHHHHHHHhhhhhc-cccchHHHH
Q 009978 117 VMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-YYGGKIIMAWGVALWSLATFLTPWA-ADTSLLALL 193 (521)
Q Consensus 117 ~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~d-r~Grr~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~ 193 (521)
+--.++.++- +-||++..|...+.+....|..++-...|++.. |.++++...+++.+.+++..+..++ ...+.+.+.
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~ 305 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFR 305 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 4445555554 448999999999999999999999999999988 5678888888888877776654333 126788899
Q ss_pred HHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc----------CchhHHHHHHH
Q 009978 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA----------GIFGPFVIFGL 263 (521)
Q Consensus 194 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~----------gw~~~f~~~~~ 263 (521)
..-++.|++.|.......+...+...+++.|..+|.+.....++..+|..+++.+.|.. +|-.+|.+-++
T Consensus 306 ~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ 385 (403)
T PF03209_consen 306 PGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAV 385 (403)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999886521 35556666666
Q ss_pred HHHHHHHHHH
Q 009978 264 SGFLWVLVWL 273 (521)
Q Consensus 264 ~~~i~~i~~~ 273 (521)
..++.+++..
T Consensus 386 ll~~a~~ll~ 395 (403)
T PF03209_consen 386 LLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHH
Confidence 5555544443
No 252
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.58 E-value=2.7e-07 Score=66.51 Aligned_cols=79 Identities=20% Similarity=0.203 Sum_probs=72.6
Q ss_pred hhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHH
Q 009978 112 NADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLA 191 (521)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~ 191 (521)
+..+..+.+.+|.+++|.++|.++.|++.+...+|+.+|.+...++.++..+++.+..+.+...+..+.+++. ++++.
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~--~~~~~ 82 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT--HSFWL 82 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH--hchHH
Confidence 5677889999999999999999999999999999999999999999999888999999999999999999988 66654
Q ss_pred H
Q 009978 192 L 192 (521)
Q Consensus 192 l 192 (521)
+
T Consensus 83 w 83 (85)
T PF06779_consen 83 W 83 (85)
T ss_pred H
Confidence 4
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.57 E-value=5.8e-06 Score=68.31 Aligned_cols=108 Identities=14% Similarity=0.164 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhc
Q 009978 138 IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARW 217 (521)
Q Consensus 138 ~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 217 (521)
.-.++......+++++.+.+.+++|.|+.++++.+.+.+-.... +. ++.+.++.+-++.|++.+..+.+...++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~--~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FY--PNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hh--hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 34456666677888888999999999999999999988765554 34 7788999999999999999999999999999
Q ss_pred CCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 218 FPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 218 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
.+++++++..++.......+.++|.++.-.+
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888888888776554
No 254
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.55 E-value=8.8e-05 Score=75.29 Aligned_cols=158 Identities=18% Similarity=0.153 Sum_probs=124.7
Q ss_pred hhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHh-cchHHHHHHHHHHHHHHhhhhhcc----------
Q 009978 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLTPWAA---------- 185 (521)
Q Consensus 117 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~~~~~~~~~~l~~~~~---------- 185 (521)
.....+..+.++++.+...+.-..+.+.-.....++.++.++|-| ||-+++.++.++..++..+..+..
T Consensus 56 ~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~ 135 (571)
T KOG1237|consen 56 LVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC 135 (571)
T ss_pred chhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Confidence 346677788888998888888888899888999999999999987 899999999988888865433220
Q ss_pred ----------ccc---hHHHHHHHHHHhhhhcchhhHHHHHHHhcCC---ch-hh--HHHHHHHHhhhhhhhHHHHHHHH
Q 009978 186 ----------DTS---LLALLAMRAVVGLAEGVALPAMNNMVARWFP---QT-ER--ARAVAIAMGGFTSGNAIGLVLSP 246 (521)
Q Consensus 186 ----------~~~---~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~---~~-~r--~~~~~~~~~~~~~g~~~g~~l~~ 246 (521)
.++ ...++.+.-+..+|.|+.-+...++-+|-++ ++ ++ ...+.++....++|..++..+..
T Consensus 136 ~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~v 215 (571)
T KOG1237|consen 136 KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLV 215 (571)
T ss_pred cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHH
Confidence 001 2356677778888999999999999999998 22 22 36788889999999999998888
Q ss_pred HhhhccCchhHHHHHHHHHHHHHHHHHH
Q 009978 247 ILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (521)
Q Consensus 247 ~l~~~~gw~~~f~~~~~~~~i~~i~~~~ 274 (521)
+.-+..+|...|.+..+..++++++++.
T Consensus 216 yiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 216 YIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred hhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 8878899999999988877766655443
No 255
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.52 E-value=1.2e-09 Score=109.96 Aligned_cols=163 Identities=16% Similarity=0.156 Sum_probs=109.8
Q ss_pred hhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhh--h-cccc-----
Q 009978 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP--W-AADT----- 187 (521)
Q Consensus 116 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~--~-~~~~----- 187 (521)
.......+.+.++.+.+.. -.......+...++.++...+.||+|||++++.+.++.+++.+.++ . ...+
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3444556777777777776 1122233344556677777999999999999999988887776664 1 1111
Q ss_pred chHHHHHHHHHHhhhhc-chhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 009978 188 SLLALLAMRAVVGLAEG-VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGF 266 (521)
Q Consensus 188 ~~~~l~~~r~l~G~g~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~ 266 (521)
+...+.... +..++.+ +..+....+..|.+|.+.|+++.++......++..+++.+...+.+..+-...+++.+.+++
T Consensus 348 ~~~~i~~~~-l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~ 426 (451)
T PF00083_consen 348 SILSIVFLA-LFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCL 426 (451)
T ss_pred ccccceeee-eccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHH
Confidence 122222222 2212222 33566678889999999999999999999999999999888888776663456666666666
Q ss_pred HHHHHHHHhcCCCCC
Q 009978 267 LWVLVWLSATSSTPD 281 (521)
Q Consensus 267 i~~i~~~~~~~~~~~ 281 (521)
+..+..+++.||+..
T Consensus 427 i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 427 IAIIFVYFFLPETKG 441 (451)
T ss_pred HHHhheeEEEeeCCC
Confidence 666667777777654
No 256
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.52 E-value=1.4e-07 Score=89.24 Aligned_cols=182 Identities=15% Similarity=0.046 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhH--------HHHHH-HHHHHHhhhhhHHHHhHhcchHHHH
Q 009978 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGI--------VQSSF-LWGYLVSPIAGGTLVDYYGGKIIMA 168 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~--------~~s~~-~~~~~i~~~~~G~l~dr~Grr~~~~ 168 (521)
-+.+...+..+|+.-...+..+.....+.+..++.+.+... ...+. ..++..+-.+...++|+.|||+..+
T Consensus 303 g~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~ 382 (538)
T KOG0252|consen 303 GKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQL 382 (538)
T ss_pred HHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHH
Confidence 36667777778877777777777888888887776554433 12222 2223336666788999999999999
Q ss_pred HHHHHHHHHHhhhhhccc--cchHHHHHHHHHHhhhh-cchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHH
Q 009978 169 WGVALWSLATFLTPWAAD--TSLLALLAMRAVVGLAE-GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (521)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~--~~~~~l~~~r~l~G~g~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 245 (521)
.+.+++.+..+..+...+ .+-..+++...+..+.. -+-......+-+|.+|.+-|+...|+..+..-.|.++|....
T Consensus 383 ~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F 462 (538)
T KOG0252|consen 383 MGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF 462 (538)
T ss_pred hhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh
Confidence 999999999888877632 11222233333332221 122344556778999999999999999999999999999999
Q ss_pred HHhhh-----ccCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 009978 246 PILMS-----QAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (521)
Q Consensus 246 ~~l~~-----~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~ 280 (521)
.++.+ ..+.++++++.+.+.++..+..+++ ||+.
T Consensus 463 ~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk 501 (538)
T KOG0252|consen 463 LYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETK 501 (538)
T ss_pred hHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-eccc
Confidence 99988 7789999999999888776665554 4543
No 257
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.44 E-value=1.4e-06 Score=62.55 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=60.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~ 174 (521)
+...+++.+.......|.+|...++.|+|+.++|.+.++..+...++++++|.++||+++++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34456666666778888889899999999999999999999999999999999999999998877765543
No 258
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.42 E-value=1.5e-06 Score=86.24 Aligned_cols=165 Identities=13% Similarity=0.086 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH----hcchHHHHHHHH
Q 009978 98 VKVVSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKIIMAWGVA 172 (521)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr----~Grr~~~~~~~~ 172 (521)
-..++..++..++.....+.+...+|.+.++ .|.|..+.+.+...+.++.+++.+++|+++|| ..+|........
T Consensus 272 dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~ 351 (495)
T KOG2533|consen 272 DPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLC 351 (495)
T ss_pred chhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3455666777777888888888899998888 56999999999999999999999999999999 667776666666
Q ss_pred HHHHHH-hhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhh-HHHHHHHHhhhhhhhHH-HHHHHHHhh
Q 009978 173 LWSLAT-FLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTER-ARAVAIAMGGFTSGNAI-GLVLSPILM 249 (521)
Q Consensus 173 ~~~~~~-~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~-g~~l~~~l~ 249 (521)
++.+.. +..... .+.......-+....+.....+.......+...++.| -...+....+.+.+..+ ++...+...
T Consensus 352 ~~~~~g~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~a 429 (495)
T KOG2533|consen 352 LYAIIGAISLLAA--AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDA 429 (495)
T ss_pred HHHHHHHHHHHhh--ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccC
Confidence 555444 433333 3344444433444455556677778888887765543 33344444444444444 444444455
Q ss_pred hccCchhHHHHHHHH
Q 009978 250 SQAGIFGPFVIFGLS 264 (521)
Q Consensus 250 ~~~gw~~~f~~~~~~ 264 (521)
..++|...|......
T Consensus 430 p~y~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 430 PRYGWGAVFYMLVAA 444 (495)
T ss_pred cchhhhhHHHHHHHH
Confidence 567888888544433
No 259
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.35 E-value=1.9e-05 Score=80.56 Aligned_cols=180 Identities=16% Similarity=0.089 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHh
Q 009978 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (521)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 179 (521)
....+.+..+......+......+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.+
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 344444555555555566677788888888877554 4444455666677777779999999999999999999999988
Q ss_pred hhhhcccc-----------chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 180 LTPWAADT-----------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 180 l~~~~~~~-----------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
+++..... ....+....+.......+..+....+.+|.+|.+-|+++.++......+...+-......+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~ 454 (513)
T KOG0254|consen 375 ILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFI 454 (513)
T ss_pred HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 76654100 1112222222222222334556667899999999999999987776665555444444444
Q ss_pred hhccCchhHHHHHHHHHHHHHH-HHHHhcCCCC
Q 009978 249 MSQAGIFGPFVIFGLSGFLWVL-VWLSATSSTP 280 (521)
Q Consensus 249 ~~~~gw~~~f~~~~~~~~i~~i-~~~~~~~~~~ 280 (521)
.+..++...|...+..+.+..+ ..++..||..
T Consensus 455 ~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 455 TEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 4443445667776666666555 4555666654
No 260
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.33 E-value=2.8e-05 Score=69.81 Aligned_cols=158 Identities=17% Similarity=0.105 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHH--H
Q 009978 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG--L 416 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 416 (521)
..+.+..|.|.. ++.+|+|.++...+.....++..+| ++.|.+.|+++.+ ..+.++......+... +
T Consensus 17 t~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~---------~~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 17 TTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW---------VVLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred cccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH---------HHHHHHHHHHHHHHHHHHH
Confidence 445566666655 4559999999999988888888765 8899999999988 3444444433333332 2
Q ss_pred hccc-----hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Q 009978 417 TAAK-----SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFL 491 (521)
Q Consensus 417 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 491 (521)
.... +.|......+++................+-+|++||++.|+.-....+++.+-..+...+.+. +....+
T Consensus 86 ~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~--~~~~fl 163 (250)
T PF06813_consen 86 AVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD--DPSSFL 163 (250)
T ss_pred HHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC--ChHHHH
Confidence 2221 122222222222222222223333334466789999999999999999999988888777765 233444
Q ss_pred HHHHHH-HHHHHHHHHHhc
Q 009978 492 LLTSLL-YFLSALFYIIFS 509 (521)
Q Consensus 492 ~~~~~~-~~~~~~~~~~~~ 509 (521)
.+.+.. .+++.+...+.+
T Consensus 164 l~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 164 LFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHHHHHHHHHHHHhhhee
Confidence 444433 333333334443
No 261
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.28 E-value=0.00036 Score=65.15 Aligned_cols=148 Identities=14% Similarity=0.053 Sum_probs=88.9
Q ss_pred HHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Q 009978 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWL 429 (521)
Q Consensus 350 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (521)
..++ +|++..+++.++......+.+...+.|.+.||+||| .......++.++..+. -..++...+++.=
T Consensus 60 LY~~-yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk---------~~cl~~cily~~scl~-k~~~~~~~L~~GR 128 (354)
T PF05631_consen 60 LYES-YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK---------KACLLFCILYSLSCLT-KHSSNYPVLLLGR 128 (354)
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch---------HHHHHHHHHHHHHHHH-HhccccHHHHHHH
Confidence 3344 899999999999999999999999999999999998 2333333333333332 2334455444444
Q ss_pred HHHHHHHhhhhhhhHHH-HHhhhc-----cchhhHHhHHH-HHHHHHHHHHHHHHHHHhhcccc-hHHHHHHHHHHHHHH
Q 009978 430 TLAIGMKSFSHSGFLVN-LQEIAP-----QYSGVLHGISN-TAGTFAAILGTVGAGFFVELVGS-FQGFLLLTSLLYFLS 501 (521)
Q Consensus 430 ~~~~~~~~~~~~~~~~~-~~~~~~-----~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~ 501 (521)
++++..........-++ +.|... +..+..++... ..+.+-.+.+..+.-.+.+..|. ...+|.....+.+++
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 44444444444444322 333322 33455555444 23334455556666666776652 477888888777777
Q ss_pred HHHHHHh
Q 009978 502 ALFYIIF 508 (521)
Q Consensus 502 ~~~~~~~ 508 (521)
.++....
T Consensus 209 ~~~I~~~ 215 (354)
T PF05631_consen 209 AVLILKT 215 (354)
T ss_pred HHHHHhc
Confidence 6665543
No 262
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.26 E-value=1e-05 Score=78.96 Aligned_cols=111 Identities=21% Similarity=0.240 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHhhhhhccc-cc------hHHHHHHHHHHhhhhcchhhHHHHHHHhcCCch---hhHHHHHHHHhhh
Q 009978 165 IIMAWGVALWSLATFLTPWAAD-TS------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQT---ERARAVAIAMGGF 234 (521)
Q Consensus 165 ~~~~~~~~~~~~~~~l~~~~~~-~~------~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 234 (521)
|+++++.+++.+|.+++.++.. .+ .+.++++.++.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 5778888899999887444311 22 357889999999999999999999999999765 5778899999999
Q ss_pred hhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 009978 235 TSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (521)
Q Consensus 235 ~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~ 275 (521)
++|..++..+.+++-+++||.+.|.+.++..++..+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998888776655543
No 263
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.23 E-value=1.4e-05 Score=81.91 Aligned_cols=141 Identities=13% Similarity=0.011 Sum_probs=109.7
Q ss_pred hCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 009978 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIG 434 (521)
Q Consensus 355 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (521)
.+.+.....+..+++.++..+|.++.|.++||+||| .+...+.++..++-+.....++.+...+.=++.+.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk---------~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRK---------PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccH---------HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 456667778888899999999999999999999999 45566666666666677777777777766666665
Q ss_pred HHhhhhhhhHHHHHhhh-ccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 435 MKSFSHSGFLVNLQEIA-PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 435 ~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
+.+........+..|.. |++|+.+..+ ......++.+++...+++.. +|+..+++..+..++.++++++.
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~ 254 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLP 254 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHcc
Confidence 55555566666666665 5799999999 88889999999999999988 48999988888877776664444
No 264
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.07 E-value=0.00014 Score=72.01 Aligned_cols=125 Identities=20% Similarity=0.224 Sum_probs=110.7
Q ss_pred hhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhH-HHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhh
Q 009978 123 VPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGG-TLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGL 201 (521)
Q Consensus 123 ~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G-~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~ 201 (521)
-.+...+++++.+.+...+.......+++++.. .+...+|-|+++.+|++...+...+.+++ ++.|+++....+.++
T Consensus 266 ~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~--~~~w~~~~~~v~~~~ 343 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA--TETWMMFAAGVVVAL 343 (463)
T ss_pred EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh--ccchhhhHHHHHHHh
Confidence 345567899999999998888888888888887 77777899999999999999999999999 999999999888877
Q ss_pred hhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh
Q 009978 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (521)
Q Consensus 202 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 250 (521)
. +...++..+.++.+.+++++|+++++.+....+..+++|.+-+.+..
T Consensus 344 ~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 344 A-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred h-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 6 66789999999999999999999999999999999999998877754
No 265
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.00 E-value=4.6e-05 Score=54.67 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhc
Q 009978 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (521)
.+-..+++.+.+...+..++|.|+++ .|+++.++|.+.++..+...++.+++|+++||.+++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 34566777888888999999999998 799999999999999999999999999999999988
No 266
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.90 E-value=0.00057 Score=70.85 Aligned_cols=163 Identities=11% Similarity=0.031 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 009978 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (521)
++++...+..|+.+.+|++...+..+...+....-+..+++|++.|++-.+ .+. +.++.++..++..++...
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~-------~~t-Il~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK-------FKT-ILYLSIVYVVGHALLSFG 74 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------HHH-HHHHHHHHHHHHHHHHhc
Confidence 455666777888887899988888877777777777889999999986444 112 222222222232222221
Q ss_pred --ch------hHHHHHHHHHHHHHHhhhhhhhHHHHHhhhc----cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc--
Q 009978 420 --KS------PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP----QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG-- 485 (521)
Q Consensus 420 --~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-- 485 (521)
+. ....+..+.+..+..+..-+...+...+..+ +.+-..+.++....++|+.+++.+.+++.+..+
T Consensus 75 a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f 154 (654)
T TIGR00926 75 AIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF 154 (654)
T ss_pred cCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 10 1112222333333333334445555554443 246778899999999999999999999875431
Q ss_pred ----chHHHHHHHHHHHHHHHHHHHHhcc
Q 009978 486 ----SFQGFLLLTSLLYFLSALFYIIFST 510 (521)
Q Consensus 486 ----~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
+|...|.+.+++++++.+++...++
T Consensus 155 g~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 155 GCQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3788888888888888777665443
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.90 E-value=0.0005 Score=60.90 Aligned_cols=101 Identities=16% Similarity=0.192 Sum_probs=57.9
Q ss_pred hhhHHHHHHHHhhhhhhhHHHHHHHHHh---h--hccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHH
Q 009978 221 TERARAVAIAMGGFTSGNAIGLVLSPIL---M--SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL 295 (521)
Q Consensus 221 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l---~--~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (521)
++|+....+...+.++|.++....--.- . -.-.|++.+.+.+++.++.+++..++-.+-....+. +++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~------ 74 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQ------ 74 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-ccc------
Confidence 4556666666677777776654432111 1 122599999999988877776666653332111111 000
Q ss_pred HhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHH
Q 009978 296 REKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (521)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 337 (521)
++.+.........++.+|++..|...+.+...-
T Consensus 75 ---------~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 75 ---------EKENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ---------ccccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 111112233467889999999998877766543
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.87 E-value=0.0017 Score=61.92 Aligned_cols=120 Identities=11% Similarity=0.018 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHH----hhhhhHHHHhHhcchHHHHHHHH-HHH
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLV----SPIAGGTLVDYYGGKIIMAWGVA-LWS 175 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i----~~~~~G~l~dr~Grr~~~~~~~~-~~~ 175 (521)
..+.++..+-....++++....+++.+++-.+.. .-.....+.+...+ ....-..+.-|..+|-...+... +..
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~ 98 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILF 98 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444556677888888888877644333 22333333333333 33333444444222211111111 111
Q ss_pred HHHhhhhhc-----cccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchh
Q 009978 176 LATFLTPWA-----ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE 222 (521)
Q Consensus 176 ~~~~l~~~~-----~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 222 (521)
+..+..... ....++..++.-.+.+++.|..........++. |++.
T Consensus 99 i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~y 149 (406)
T KOG1479|consen 99 IVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEY 149 (406)
T ss_pred HHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHH
Confidence 111112221 113456667777888888888887777766654 5443
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.73 E-value=0.014 Score=57.74 Aligned_cols=53 Identities=11% Similarity=0.159 Sum_probs=36.2
Q ss_pred chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHH
Q 009978 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (521)
Q Consensus 188 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 245 (521)
.++..++.-++.|++.+.......++.+ .+|++ .++.+..+.+++++++.++-
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ 157 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAM 157 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHH
Confidence 4666777788899998888888888776 55543 45555666666666655543
No 270
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.69 E-value=0.00037 Score=62.75 Aligned_cols=139 Identities=17% Similarity=0.167 Sum_probs=92.9
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHH
Q 009978 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVA 215 (521)
Q Consensus 136 ~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 215 (521)
.|.+.-+-.+...+..+.+..+.||+..-.=..+..++.+.+.++.+++ ++.++-+.+-.+..++.|.......++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs--~s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS--NSVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEec--cchhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 3555556667777777888889998754333445556777788888888 88999888888888888876655555443
Q ss_pred hcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhh--ccCchhHHHHHHHHHHHHHHHHHHhcCCCCC
Q 009978 216 RWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS--QAGIFGPFVIFGLSGFLWVLVWLSATSSTPD 281 (521)
Q Consensus 216 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~--~~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~ 281 (521)
. +++ ...+.++.+.+.++++|..--..+.+ .+..|...++...+-++.++..++..++++.
T Consensus 142 ~-Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes 204 (409)
T KOG3880|consen 142 R-YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPES 204 (409)
T ss_pred c-CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcc
Confidence 3 322 34555666666667777665555554 3457778888777766666666666555443
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.67 E-value=0.0013 Score=63.28 Aligned_cols=138 Identities=11% Similarity=-0.015 Sum_probs=89.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHH--HHHH---H
Q 009978 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL--WSLA---T 178 (521)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~--~~~~---~ 178 (521)
+.+.++..+.....+.+.+.. -.++.-...+..+...+|.+|..++.--...+ |+ |++.+.+.+- ..+. .
T Consensus 252 L~lVY~aEY~InqGv~~tl~f-p~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~ 326 (402)
T PF02487_consen 252 LFLVYFAEYFINQGVAPTLLF-PNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQ 326 (402)
T ss_pred HHHHHHHHHHHHhchHHHhcC-CccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHH
Confidence 344555555433333322211 12233345677788888888777664432221 22 4433333222 2221 2
Q ss_pred hhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 179 FLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 179 ~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
...-+. ++.|.+++.-+..|+..|..++.....+.+-.++++|..++|..+.+.++|..++.+++-.+
T Consensus 327 s~~~fi--psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 327 SWYRFI--PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHh--hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 223334 78888889999999999999999999999999999999999999999999999998887665
No 272
>PRK03612 spermidine synthase; Provisional
Probab=97.63 E-value=0.0078 Score=61.04 Aligned_cols=173 Identities=15% Similarity=0.050 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHH
Q 009978 330 IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAP 409 (521)
Q Consensus 330 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 409 (521)
.+..++..++...+.......+...+|-+....+.+.+++..+..+|+.+++++.++..++- . ..-+.++++..
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-----~-~~e~~i~l~~~ 93 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-----V-AVELLLALLGG 93 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-----H-HHHHHHHHHHH
Confidence 34444455555566666666677668888888888888888888888888887764333220 0 00111111111
Q ss_pred HHHHHH---HhccchhHH-HHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhh-cc
Q 009978 410 GIALIG---LTAAKSPVM-ASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE-LV 484 (521)
Q Consensus 410 ~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~ 484 (521)
....+. ......... .....++...+.+...|...-+..+...+..|...|-.+....+|+++|+++.+++.- ..
T Consensus 94 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l 173 (521)
T PRK03612 94 LSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL 173 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc
Confidence 111111 111001111 1111111122223333333333332222346777888999999999999999888764 67
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHh
Q 009978 485 GSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 485 g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
|.....+++..+..++++++.+..
T Consensus 174 G~~~t~~~~a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 174 GLIRTAALTGSLNLLAALVFLWLF 197 (521)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 733444444333333343333333
No 273
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.62 E-value=0.028 Score=51.65 Aligned_cols=71 Identities=17% Similarity=0.169 Sum_probs=54.0
Q ss_pred HHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcC
Q 009978 145 WGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF 218 (521)
Q Consensus 145 ~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 218 (521)
+.....+++.+.++.++|-|+++.++...+......-. - +.+..++-.....|+|.+..+..-.+++++.-
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl-~--pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANL-E--PRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc-c--hhHHhhccHHHhhccccccccccCcceecHHH
Confidence 44455566666899999999999998888766544332 2 67888999999999999988877766666654
No 274
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.59 E-value=0.0013 Score=65.37 Aligned_cols=159 Identities=21% Similarity=0.220 Sum_probs=94.5
Q ss_pred HHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccc----h
Q 009978 346 WMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK----S 421 (521)
Q Consensus 346 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 421 (521)
-...++++.+|+++.+...+.....+...+ .++.|.++|-+.-.+.+ |+..+.++.++..+..+.+...+ +
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~r----r~~Y~~i~~~~~~~~~~~~~~~~~~~~s 85 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYR----RKPYMIIGWLLGAVSALVLALLPASESS 85 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCc----chHHHHHHHHHHHHHHHHHHhcccccch
Confidence 345677788999999988877776665554 57899999987521111 23444444444433333222211 2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHHhhh---ccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 009978 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIA---PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (521)
.....+.+++............-....|.. |+.+|...+.+.....+|++++..+.|.+.+..+ ++..|.+.+.+.
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~ 164 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALP 164 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHH
Confidence 222222222222222222223333333333 3458888999999999999999999999999876 777787777666
Q ss_pred HHHHHHHHHhcc
Q 009978 499 FLSALFYIIFST 510 (521)
Q Consensus 499 ~~~~~~~~~~~~ 510 (521)
++..+..+.+.+
T Consensus 165 ~l~~~~~~~~~~ 176 (433)
T PF03092_consen 165 LLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHhhh
Confidence 665544444443
No 275
>PRK03612 spermidine synthase; Provisional
Probab=97.57 E-value=0.0071 Score=61.32 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=85.5
Q ss_pred hhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHH---HHHHhhhhhcc--ccc-hHHHHHHHHHHhh
Q 009978 128 AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW---SLATFLTPWAA--DTS-LLALLAMRAVVGL 201 (521)
Q Consensus 128 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~---~~~~~l~~~~~--~~~-~~~l~~~r~l~G~ 201 (521)
-+|.+..+.+.+.+++..|..+|+.++|++.++.-++.. .+-..+. .++..+..... ... ...++...++.++
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 122 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL 122 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468888899999999999999999999888744333322 2111111 11111111110 011 1223344556777
Q ss_pred hhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhh-hccCchhHHHHHHHHHHHHH
Q 009978 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM-SQAGIFGPFVIFGLSGFLWV 269 (521)
Q Consensus 202 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-~~~gw~~~f~~~~~~~~i~~ 269 (521)
..|+..|....+..+.. .++-++..|.......+|.++|.++.+++. ..+|-....++.+.+.++..
T Consensus 123 l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 123 LIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 78888887777666543 234567788888899999999999988765 46775555555554444433
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.23 E-value=0.056 Score=44.84 Aligned_cols=109 Identities=12% Similarity=0.015 Sum_probs=70.1
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhhhhh
Q 009978 364 WFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGF 443 (521)
Q Consensus 364 ~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (521)
.-.++......+..++.+.+.+++|.| +.+.++.+...+........+ .+..+..-.+.+...+..+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~~~~~-~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASFFYPN-SYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHhhhhHHhhHhh
Confidence 345566667778888899999999998 455555555554444443333 3333333334444444555555
Q ss_pred HHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh
Q 009978 444 LVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 444 ~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 482 (521)
-.++.+... +.+++..++...+.+.+.++|..+.-.+.+
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555555555 588999999999999888888877655543
No 277
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.21 E-value=0.00074 Score=64.57 Aligned_cols=177 Identities=12% Similarity=0.079 Sum_probs=111.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcc-hHHHHHHHHHHHHHHh-
Q 009978 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATF- 179 (521)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Gr-r~~~~~~~~~~~~~~~- 179 (521)
.++.+.+.+.....+.....+......-|.+....|+......++..+++...|.+.||... |.++++......++..
T Consensus 269 ~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~ 348 (480)
T KOG2563|consen 269 IILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLM 348 (480)
T ss_pred HHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 33334444444444455555555555567777889999999999999999999999999864 5566665555555532
Q ss_pred hhhhcc-ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC----c
Q 009978 180 LTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG----I 254 (521)
Q Consensus 180 l~~~~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g----w 254 (521)
+..+.. ..+.+.++..-.+.|++.....|...-+-.|..-|..-+.-.|+.....++=.++-..+-+...+..+ |
T Consensus 349 l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~ 428 (480)
T KOG2563|consen 349 LLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNT 428 (480)
T ss_pred HHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCC
Confidence 221111 12344566666778888888889888888886655555566777777666666666666677666655 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCC
Q 009978 255 FGPFVIFGLSGFLWVLVWLSATSS 278 (521)
Q Consensus 255 ~~~f~~~~~~~~i~~i~~~~~~~~ 278 (521)
...-+......++.+++..+++|+
T Consensus 429 ~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 429 FPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred ccchhHhHHHHHHHHHHHhhhhhh
Confidence 433344444444444444454433
No 278
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.20 E-value=0.0049 Score=60.36 Aligned_cols=148 Identities=19% Similarity=0.114 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhh
Q 009978 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (521)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l 180 (521)
++...++..+-++....++.....+...-|+++..+|..-+...+....+.....++.+|+|..|.-+++.........+
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH
Confidence 44444444444444444555666666666999999999999999999999999999999999998877776644433322
Q ss_pred h---hhccc-c----chHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 181 T---PWAAD-T----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 181 ~---~~~~~-~----~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
+ .+.+. + +...++.+-++.=+|.=++..+..-++.|..|+++||...|.-....++-.++-..++-.+
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2 12211 1 2333444444444555566778889999999999999999999999888888777665544
No 279
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.19 E-value=0.0044 Score=60.91 Aligned_cols=176 Identities=12% Similarity=0.063 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHH
Q 009978 326 TWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (521)
Q Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (521)
++...+..++.......+..-.-+|+++ ..+.+....|++.+...++.++++++.|+...|.+.-+.. ++...
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P------li~s~ 109 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP------LIVSF 109 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC------HHHHH
Confidence 4445555555554444444444456655 2466677799999999999999999999999988753211 12222
Q ss_pred HHHHHHHHHH-HHhccchhHHHHHHHHHHHHHHhhh---hhhhHHHHHh-hhccchhhHHhHHHHHHHHHHHHHHHHHHH
Q 009978 405 GFIAPGIALI-GLTAAKSPVMASAWLTLAIGMKSFS---HSGFLVNLQE-IAPQYSGVLHGISNTAGTFAAILGTVGAGF 479 (521)
Q Consensus 405 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 479 (521)
.....+-.+. .+....+.... .++++-.+.+.+ ....-.+..+ ..+++|.++++.......+|.++||.+...
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y--~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKY--LMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHH--HHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 2222222222 33333321111 122222222222 2233344443 345788888888887777777777766543
Q ss_pred Hhh------------cccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 480 FVE------------LVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 480 l~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
+.. .+..|..+-++.+++.++.+++....-
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f 229 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFF 229 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhe
Confidence 332 112366677777777777666555543
No 280
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.00015 Score=63.42 Aligned_cols=64 Identities=3% Similarity=0.083 Sum_probs=46.2
Q ss_pred hHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHH
Q 009978 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYL 379 (521)
Q Consensus 316 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 379 (521)
+|..-+++-.+..+.+.+.+.-...+.-..|++.|..+..+++....+++-.+..+.+...+.+
T Consensus 193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 4445566667777888888877777888888998888878887777777766666666555443
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.92 E-value=0.061 Score=52.00 Aligned_cols=160 Identities=10% Similarity=0.029 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHH-hCCCcccchhHhHHHHH-HHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 009978 342 VILSWMPIYFNFV-YHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (521)
Q Consensus 342 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (521)
-...++..|+.+. .|++..+..--....+. ..++..+....+.|.++.| .++.+..+...+...++.+.
T Consensus 21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk---------pviil~~~~~i~t~~lll~~ 91 (412)
T PF01770_consen 21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK---------PVIILQALSYIITWLLLLFG 91 (412)
T ss_pred CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHHH
Confidence 3457788888876 78888876543333332 3344556777889999888 34444444433334444444
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhHHHHH-hhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHH
Q 009978 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQ-EIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVEL-VGSFQGFLLLTSLL 497 (521)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~ 497 (521)
++....-+.-++. +.....-...++++- .+++++.-++.+...+..-+|..++..++-.+... ..+|.....+....
T Consensus 92 ~sv~~mq~~q~~y-g~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~ 170 (412)
T PF01770_consen 92 TSVLAMQLMQFFY-GLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLAS 170 (412)
T ss_pred CcHHHHHHHHHHH-HHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 4444333222222 222222333334333 34456777888888888888888888887777663 23566676666666
Q ss_pred HHHHHHHHHHhccC
Q 009978 498 YFLSALFYIIFSTG 511 (521)
Q Consensus 498 ~~~~~~~~~~~~~~ 511 (521)
..++.+..+++++.
T Consensus 171 ~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 171 VSLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHHcCCC
Confidence 66666666666543
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.73 E-value=0.17 Score=50.39 Aligned_cols=146 Identities=11% Similarity=0.008 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcccchhHhHHHHHHHHHH-HHHHHHHHHHHHhcCCCcchhH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHI-----DLRQASWFSAVPWSVMAFT-GYLGGLLSDMLIQRGTSVTLTR 398 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~i~-~~~~g~l~dr~~~~~~~~~~~~ 398 (521)
+++...+..++..+.++. ---++|..+. +.+...++.+...+...+. .++.+++++|+++++.
T Consensus 8 k~~~~~l~fF~il~~Y~i-----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~l------ 76 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTI-----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEAL------ 76 (472)
T ss_pred HHHHHHHHHHHHHHHHHH-----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHh------
Confidence 444455555554444333 2345666555 2345666666555555555 6888999999998832
Q ss_pred HHHHHHHHHHHHHHHHHHh---ccch--------------------------hHHHHHHHHHHHHHHhhhhh-hhHHHHH
Q 009978 399 KILQSIGFIAPGIALIGLT---AAKS--------------------------PVMASAWLTLAIGMKSFSHS-GFLVNLQ 448 (521)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~---~~~~--------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 448 (521)
.............++.+. ..+. .|......+..-.+...... ..+..++
T Consensus 77 -f~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 77 -FYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 212121111111111111 1111 11111222223333344444 6678888
Q ss_pred hhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh
Q 009978 449 EIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 449 ~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 482 (521)
|... ++..+-+++....+++|..+++.+..++.+
T Consensus 156 di~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 156 QITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887 588899999999999999999999888773
No 283
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.73 E-value=0.013 Score=60.32 Aligned_cols=182 Identities=10% Similarity=0.055 Sum_probs=113.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHH
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (521)
+.+..+.....+......++....-.-++++++++..+.|++.+.+-++..+...+..+...|..|.++ +.
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~---------Ig 166 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRW---------IG 166 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccce---------ee
Confidence 334433333333333333454445556677799999999999999999998888888888777666522 22
Q ss_pred HHHHHHHHHHHHHhcc------------------------------------------------chhHHHHHHHHHHHHH
Q 009978 404 IGFIAPGIALIGLTAA------------------------------------------------KSPVMASAWLTLAIGM 435 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~~~ 435 (521)
.+.+++++..++.... .+....+..++++-..
T Consensus 167 ~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l 246 (735)
T KOG3626|consen 167 IGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLL 246 (735)
T ss_pred echhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHH
Confidence 3333333222221100 0001123333444444
Q ss_pred Hhhhhhh----hHHHHHhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh------------------cccchHHHHH
Q 009978 436 KSFSHSG----FLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE------------------LVGSFQGFLL 492 (521)
Q Consensus 436 ~~~~~~~----~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~------------------~~g~~~~~~~ 492 (521)
.+++... -..++.|... ++.....|+..++..+|-++|=.+++++.. +.|.|+..|+
T Consensus 247 ~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL 326 (735)
T KOG3626|consen 247 LGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL 326 (735)
T ss_pred hhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence 4444333 3455666665 477888899999988888888888887664 2356888999
Q ss_pred HHHHHHHHHHHHHHHhccCccc
Q 009978 493 LTSLLYFLSALFYIIFSTGERV 514 (521)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~ 514 (521)
+++.+.++..+.++.+++..++
T Consensus 327 i~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 327 ICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHHHHhCcccCcc
Confidence 9999999999988888775543
No 284
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.67 E-value=0.1 Score=51.45 Aligned_cols=143 Identities=13% Similarity=0.133 Sum_probs=94.1
Q ss_pred HHHHHHHhhhhhhhhhhhhhhh---hhhcCCcch-hhHHHHHHHHHHHHhhhhhHHHHhH---hcchHHHHHHHHHHHHH
Q 009978 105 ALALALCNADRVVMSVAIVPLS---LAHGWSRSF-SGIVQSSFLWGYLVSPIAGGTLVDY---YGGKIIMAWGVALWSLA 177 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~-~g~~~s~~~~~~~i~~~~~G~l~dr---~Grr~~~~~~~~~~~~~ 177 (521)
....+..+...+.+....|.-. ...+.+... .++..-...++..+++.+.+.+.+| +||++.+.++..+..++
T Consensus 246 ~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~ 325 (461)
T KOG3098|consen 246 FPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIG 325 (461)
T ss_pred HHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHH
Confidence 3344444455555555544422 223333332 2333334455556666666666654 68999999988888877
Q ss_pred Hhhhhhcc----------------ccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHH
Q 009978 178 TFLTPWAA----------------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (521)
Q Consensus 178 ~~l~~~~~----------------~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 241 (521)
.++..+.. .+++...++..++.|++.+......+.++.+.. +++|..+.++...-..++..++
T Consensus 326 ~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 326 FLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHH
Confidence 77654431 124567778889999999999999999999999 5788888888888887777765
Q ss_pred HHHHHHh
Q 009978 242 LVLSPIL 248 (521)
Q Consensus 242 ~~l~~~l 248 (521)
.......
T Consensus 405 ~f~~~~~ 411 (461)
T KOG3098|consen 405 FFFSPYL 411 (461)
T ss_pred hhhhhhh
Confidence 5554443
No 285
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.53 E-value=0.065 Score=53.11 Aligned_cols=111 Identities=15% Similarity=0.053 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhHhcch-HHHHHHHH---HHHHHHhhhhhcc-------ccchHHHHHHHHHHhhhhcc
Q 009978 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGK-IIMAWGVA---LWSLATFLTPWAA-------DTSLLALLAMRAVVGLAEGV 205 (521)
Q Consensus 137 g~~~s~~~~~~~i~~~~~G~l~dr~Grr-~~~~~~~~---~~~~~~~l~~~~~-------~~~~~~l~~~r~l~G~g~~~ 205 (521)
-....++.++-.+|..+..+.. .-++| +.+.+..+ ++.-..++|..-+ -++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 3556677777777776544321 11222 12322222 2222233332210 04556677778999999999
Q ss_pred hhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
....+..+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988888776444
No 286
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.47 E-value=0.021 Score=41.43 Aligned_cols=76 Identities=17% Similarity=0.206 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 009978 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
.+-+.+...+|...+| .++|..+.+++.+...++..+|.+...++.++.+++ .+...+.+...+......
T Consensus 6 igRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR---------RLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred hHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---------HHHHHHHHHHHHHHHHHH
Confidence 4455667778887777 799999999999999999999999999888775444 344455555555555555
Q ss_pred ccchhH
Q 009978 418 AAKSPV 423 (521)
Q Consensus 418 ~~~~~~ 423 (521)
..++.+
T Consensus 76 ~~~~~~ 81 (85)
T PF06779_consen 76 LTHSFW 81 (85)
T ss_pred HHhchH
Confidence 544443
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.46 E-value=0.31 Score=45.47 Aligned_cols=152 Identities=17% Similarity=0.171 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc--ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 009978 338 WGFFVILSWMPIYFNFVYHIDL--RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (521)
..........+.+..+ .+.+. ...++..+...+...++.++.|++.||.|+| +.................
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~~~~~~~~~~~~~~~ 87 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-------KVLIIGLLLFLLGTLLLA 87 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-------HHHHHHHHHHHHHHHHHH
Confidence 3333444556666655 44444 3678888888888888889999999999776 112222211112211111
Q ss_pred HhccchhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhcc--chhhHHhHHHH-HHHHHHHHHHHHHHHHhhc-ccchHHHH
Q 009978 416 LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ--YSGVLHGISNT-AGTFAAILGTVGAGFFVEL-VGSFQGFL 491 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~-~g~~~~~~ 491 (521)
+......+.............+...+....+..+..|+ .++...+.... ...++..+++.+.+.+.+. ...|...+
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T COG0477 88 LAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAF 167 (338)
T ss_pred hCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 11111233333332222223334455666667777774 78888888888 5778888888777777665 11245544
Q ss_pred HHHHHH
Q 009978 492 LLTSLL 497 (521)
Q Consensus 492 ~~~~~~ 497 (521)
......
T Consensus 168 ~~~~~~ 173 (338)
T COG0477 168 LLAALL 173 (338)
T ss_pred HHHHHH
Confidence 444333
No 288
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.09 E-value=0.11 Score=48.87 Aligned_cols=166 Identities=13% Similarity=0.055 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCc-chhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHH-----
Q 009978 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSR-SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS----- 175 (521)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~----- 175 (521)
+.+.+++++.....-++......++.+++-+. ...+.-...-.....+..++.|...|+..|+|++...+.+.=
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 34566677776666777777777777765533 333333344455567778888999999999998877655422
Q ss_pred -HHHhhhhhccc----cchHHHHHHHHHHhhhhcch----hhHHHHHHHhcC----CchhhH---HHHHHHHhhhhhhhH
Q 009978 176 -LATFLTPWAAD----TSLLALLAMRAVVGLAEGVA----LPAMNNMVARWF----PQTERA---RAVAIAMGGFTSGNA 239 (521)
Q Consensus 176 -~~~~l~~~~~~----~~~~~l~~~r~l~G~g~~~~----~~~~~~~i~~~~----~~~~r~---~~~~~~~~~~~~g~~ 239 (521)
.+.++..+... .++.++..+.++.-...+.. ......+-.||. ..+.+. +..+.....-..-.+
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 22233333321 24444444443332221111 111111223333 223333 333555566666788
Q ss_pred HHHHHHHHhhhccCchhHHHHHHHHHHH
Q 009978 240 IGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (521)
Q Consensus 240 ~g~~l~~~l~~~~gw~~~f~~~~~~~~i 267 (521)
+.|++.|.+.+..+-|..-...++-.++
T Consensus 190 Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhcccceeechhhhhhhhHHHHHH
Confidence 9999999999888888766555555544
No 289
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.54 E-value=0.0021 Score=65.41 Aligned_cols=165 Identities=13% Similarity=0.076 Sum_probs=1.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 009978 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
....++..-.-.-++++++++..++|++.+..-++..+..++..++.+|..|.+ .+..+.++.+++.+++.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrpr---------wig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPR---------WIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc---------eeeecHHHHHHHHHHHh
Confidence 344444433444556679999999999999999999999988888888755442 22333333333333221
Q ss_pred ccc----------------------------------------------hhHHHHHHHHHHHHHHhhhhhhh----HHHH
Q 009978 418 AAK----------------------------------------------SPVMASAWLTLAIGMKSFSHSGF----LVNL 447 (521)
Q Consensus 418 ~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 447 (521)
..+ .....+..++++-...+++.... .+++
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 100 00112223333444444443333 3555
Q ss_pred Hhhhc-cchhhHHhHHHHHHHHHHHHHHHHHHHHhh---------------------cccchHHHHHHHHHHHHHHHHHH
Q 009978 448 QEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE---------------------LVGSFQGFLLLTSLLYFLSALFY 505 (521)
Q Consensus 448 ~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---------------------~~g~~~~~~~~~~~~~~~~~~~~ 505 (521)
.|..+ +..+...|+..++..+|-++|=.++|...+ +.|.|+..|++.+++.++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55554 477778888888888887777777776553 23567888888888888888777
Q ss_pred HHhccC
Q 009978 506 IIFSTG 511 (521)
Q Consensus 506 ~~~~~~ 511 (521)
+.++|+
T Consensus 247 ~~FPk~ 252 (539)
T PF03137_consen 247 FFFPKK 252 (539)
T ss_dssp ------
T ss_pred HcCCcc
Confidence 777654
No 290
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.43 E-value=0.36 Score=47.07 Aligned_cols=81 Identities=5% Similarity=-0.016 Sum_probs=58.0
Q ss_pred HHHHHHHHHhhhhhhhHHHHHhhhc----cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 009978 428 WLTLAIGMKSFSHSGFLVNLQEIAP----QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSAL 503 (521)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 503 (521)
+.++..+.++ .=+.......+..+ +++...+..+....++|..++..+.+++-++.| |...|.+.++..+++.+
T Consensus 40 L~lia~G~G~-~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 40 LALIAVGTGG-IKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHHHC-CHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccc-ccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHH
Confidence 3334444333 33444444444443 356778889999999999999999999999988 99999999999988888
Q ss_pred HHHHhcc
Q 009978 504 FYIIFST 510 (521)
Q Consensus 504 ~~~~~~~ 510 (521)
.++.-++
T Consensus 118 ~f~~~~~ 124 (372)
T PF00854_consen 118 VFLSGRK 124 (372)
T ss_dssp HHHCCCC
T ss_pred HHHhCCc
Confidence 7665443
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.31 E-value=2.8 Score=40.54 Aligned_cols=180 Identities=11% Similarity=0.089 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHH
Q 009978 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (521)
Q Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (521)
++..++.........+.+.+..+.|..+..+.++ .-.+.....+.+.+..++...+--+...|. +.+ .+..+....
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~-~~~~l~~~~ 95 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTR-VGYLLSLIA 95 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHH
Confidence 3444444444555667777777766666444443 444444555555555555555444444331 000 000111111
Q ss_pred HHHHHHHHHHHhccc-----hhHHHHHHHHHHHHHHhhhhhhhHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 009978 406 FIAPGIALIGLTAAK-----SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFF 480 (521)
Q Consensus 406 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 480 (521)
.+......+.+.... ..+...+.+++..+..+......+......++|.....++-.+..+.+....--..-...
T Consensus 96 il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~ 175 (406)
T KOG1479|consen 96 ILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILTKAAF 175 (406)
T ss_pred HHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHHHHhc
Confidence 111111111221111 112222233334444455666777777777777554444333333333332222222222
Q ss_pred hhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 009978 481 VELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (521)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
-|...+-...|.+..++.+++.+++..++
T Consensus 176 ~~~~~sA~~yF~~s~~~~llC~i~y~~l~ 204 (406)
T KOG1479|consen 176 SDSRTSALIYFITSTVILLLCFVLYLVLP 204 (406)
T ss_pred CCCCceeehhHHHHHHHHHHHHHHHHHhh
Confidence 22222244556666666777777776443
No 292
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.00 E-value=0.12 Score=49.93 Aligned_cols=149 Identities=14% Similarity=0.045 Sum_probs=89.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHH
Q 009978 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (521)
Q Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (521)
.........+...+++..=..++++|+++ .|.+....+.+....-+.+.+.+++.|..+||...|..+. +..+..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRR----RPfI~~ 107 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRR----RPFILA 107 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccc----cchHHH
Confidence 34445555566667777778999999999 7999999999888888889999999999999754432221 122333
Q ss_pred HHHHHHHHHHHHhccch--------h-----HHHHHHHHHHHHHH----hhhhhhhHHHHHhhhc-cchhh-HHhHHHHH
Q 009978 405 GFIAPGIALIGLTAAKS--------P-----VMASAWLTLAIGMK----SFSHSGFLVNLQEIAP-QYSGV-LHGISNTA 465 (521)
Q Consensus 405 ~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~g~-~~g~~~~~ 465 (521)
+.....+.++.+.+... . ...++..+++.... .......-++..++.. +++.+ +++.+..+
T Consensus 108 ~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f 187 (498)
T KOG0637|consen 108 GSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFF 187 (498)
T ss_pred hhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHH
Confidence 33333333333322211 1 12223333333222 2333444455566554 34444 88888888
Q ss_pred HHHHHHHHHHHHH
Q 009978 466 GTFAAILGTVGAG 478 (521)
Q Consensus 466 ~~~g~~~~~~~~g 478 (521)
..+|+.+|=.+.+
T Consensus 188 ~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 188 MAVGNVLGYALGS 200 (498)
T ss_pred HHhcceeeeeccc
Confidence 8888777665554
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.50 E-value=0.026 Score=53.38 Aligned_cols=110 Identities=15% Similarity=0.020 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHh-cchHHHHHH--HHHHHHHHhhhhhcc--------ccchHHHHHHHHHHhhhhcch
Q 009978 138 IVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWG--VALWSLATFLTPWAA--------DTSLLALLAMRAVVGLAEGVA 206 (521)
Q Consensus 138 ~~~s~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~--~~~~~~~~~l~~~~~--------~~~~~~l~~~r~l~G~g~~~~ 206 (521)
....++.++-.+|..+.++..-+. .+|++...+ =+++.-..++|-..+ -+|-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 356678888888888777642111 244433321 122222222221110 035566777889999999999
Q ss_pred hhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHH
Q 009978 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (521)
Q Consensus 207 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 247 (521)
......+..+..++++|..+-.+......+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888776543
No 294
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=93.31 E-value=0.63 Score=42.74 Aligned_cols=112 Identities=14% Similarity=0.028 Sum_probs=75.9
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHH---HHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhH
Q 009978 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII---MAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPA 209 (521)
Q Consensus 133 ~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~---~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~ 209 (521)
++|.-|....|.+|..+..--.-..-=+ .-+. +-.-.+++.+......+. ++++..++.-+.-|+-.|..++.
T Consensus 287 ~sqYRwyqvlYQlGVFiSRSS~~~~~~p--~l~~LailQ~vNl~ff~~~a~~~ft--psi~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 287 DSQYRWYQVLYQLGVFISRSSINLFTMP--YLWLLAILQFVNLLFFLLQAWYWFT--PSIWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred hhcchhhheeeeeeEEEEeccceEEech--HHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhcCchHHHH
Confidence 3456788888877665433211111000 1111 222233444444556676 89999999999999888888888
Q ss_pred HHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 210 MNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 210 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
..--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 888888888889999999999999999988877776444
No 295
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.00 E-value=0.03 Score=52.89 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=0.0
Q ss_pred HHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHH
Q 009978 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLV 243 (521)
Q Consensus 196 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 243 (521)
-++.|++.+.......++.+. +|++. ...+..+.++++++..+
T Consensus 4 v~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s~ 46 (309)
T PF01733_consen 4 VALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVSL 46 (309)
T ss_dssp ------------------------------------------------
T ss_pred EEEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHHH
Confidence 345677777777777777775 55433 33444455555544433
No 296
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.71 E-value=2.1 Score=42.44 Aligned_cols=64 Identities=9% Similarity=0.003 Sum_probs=49.7
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCch
Q 009978 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (521)
Q Consensus 192 l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~ 255 (521)
+++..++..+.....+++..++-+++.+|.--|..|.+.+...++|+---..+.-++++.+.++
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 4455667777777888999999999999999999999999999999765555555555554444
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.72 E-value=3.7 Score=37.13 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=83.8
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhHhcch--HHHHHHHHHHHHHHhhhhhc----cc-cchHHHHHHHHHHhhhhcchhh
Q 009978 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGVALWSLATFLTPWA----AD-TSLLALLAMRAVVGLAEGVALP 208 (521)
Q Consensus 136 ~g~~~s~~~~~~~i~~~~~G~l~dr~Grr--~~~~~~~~~~~~~~~l~~~~----~~-~~~~~l~~~r~l~G~g~~~~~~ 208 (521)
-|.+.+.++++..+|+-+..++..|-..| ..+.+..++.++...+..+. +. .+...-+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999999998888876654 45555555555544433222 11 1222224444555567788899
Q ss_pred HHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHH
Q 009978 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (521)
Q Consensus 209 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i 270 (521)
....+=.++.|++.|...+.++..-.++-..++-..--.-....+-|..|-++.+...+..+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHH
Confidence 99999999999999998888866554443322211100000122456777777666555433
No 298
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=89.88 E-value=18 Score=34.23 Aligned_cols=152 Identities=18% Similarity=0.186 Sum_probs=89.7
Q ss_pred hhhhhhhh-hcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHH----HHHHHH---HHHHhhhhhccccchHHH
Q 009978 121 AIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA----WGVALW---SLATFLTPWAADTSLLAL 192 (521)
Q Consensus 121 ~~~~~~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~----~~~~~~---~~~~~l~~~~~~~~~~~l 192 (521)
.+..+... +|-.-.|.+.+.+.|...+.+|+...-++.|.--.-+.+. +|++.- .+..+.+++-..++-+.+
T Consensus 29 al~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vl 108 (508)
T COG4262 29 ALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVL 108 (508)
T ss_pred HHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHH
Confidence 33444444 3667778899999999999998888877777543332222 222211 111122222223567788
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhh-hccCchhHHHHHHHHHHHHHHH
Q 009978 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM-SQAGIFGPFVIFGLSGFLWVLV 271 (521)
Q Consensus 193 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-~~~gw~~~f~~~~~~~~i~~i~ 271 (521)
++.-++.|.-.|...|..+.++.+-. .+.....+.....-.+|.+.+.++-.++. ...|.--.-...+++.++.++.
T Consensus 109 y~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv 186 (508)
T COG4262 109 YALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVV 186 (508)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999888722 22222333334446777777777666543 4455433334455555555544
Q ss_pred HHH
Q 009978 272 WLS 274 (521)
Q Consensus 272 ~~~ 274 (521)
.++
T Consensus 187 ~~f 189 (508)
T COG4262 187 TLF 189 (508)
T ss_pred HHH
Confidence 333
No 299
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=89.43 E-value=7.2 Score=37.36 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=39.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHH-----HHHhcCCCc
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD-----MLIQRGTSV 394 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-----r~~~~~~~~ 394 (521)
+.+..+...+.++........ .+|.+++. .|.|-.+.+......+=-. -.+++..+.| |+|||+..+
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhcccccee
Confidence 345555666666655554444 78888886 5777766655433322211 2356666666 999986433
No 300
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=88.91 E-value=13 Score=38.50 Aligned_cols=171 Identities=18% Similarity=0.135 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHH
Q 009978 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (521)
Q Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (521)
.+....+-..+++++...+-.|+.+.++.+...+.-....+........+++++++|-+--|- ..+.++.++
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry--------~tI~~~s~i 113 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY--------FTINIGSLI 113 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH--------HHHHHHHHH
Confidence 334444455566666777888888888888877777777766677777789999999875552 112222222
Q ss_pred HHHHHHHHh-------cc-------------chhH-HHHHHHHHHHHHH----hhhhhhhHHHHHhhhc----c---chh
Q 009978 409 PGIALIGLT-------AA-------------KSPV-MASAWLTLAIGMK----SFSHSGFLVNLQEIAP----Q---YSG 456 (521)
Q Consensus 409 ~~~~~~~~~-------~~-------------~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~---~~g 456 (521)
..++..++. .. ..+. .....+....... +..-+.......+-.+ + ...
T Consensus 114 ~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~ 193 (571)
T KOG1237|consen 114 SLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIP 193 (571)
T ss_pred HHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcc
Confidence 111111111 00 0001 0111111111111 1112333333333332 1 334
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 457 VLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 457 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
.-+..+....++|..++..+.-++-+..| |...|.+..++.++++++++..
T Consensus 194 ~fFnW~yf~~~~g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 194 SFFNWFYFSQNGGALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHcC
Confidence 67788888889999999888888877776 8888888888888877776653
No 301
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=84.80 E-value=12 Score=35.41 Aligned_cols=95 Identities=14% Similarity=0.016 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhHhcchHH--HHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHH
Q 009978 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKII--MAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMV 214 (521)
Q Consensus 137 g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i 214 (521)
|..-++..+..+++.+..|.+--++.|..- +.++.+..+...+++.-. ++.|..+++.++.+.-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t--~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQT--QHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcc--cceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 666677778888889999999877777643 334444444444445555 8899988888888777777778888888
Q ss_pred HhcCCchhhHHHHHHHHhh
Q 009978 215 ARWFPQTERARAVAIAMGG 233 (521)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~ 233 (521)
++...++.-|..+|+....
T Consensus 352 A~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHhhhhhhheeeeehHHHH
Confidence 8888778888888876543
No 302
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=84.25 E-value=17 Score=34.77 Aligned_cols=170 Identities=14% Similarity=0.118 Sum_probs=81.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHH
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (521)
+....+.+.+++...+--....-...|+.+..|-+....+....+-+....+...+.|...|+..|.|...+.. .+--
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L--~lqN 104 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL--LLQN 104 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH--hhcc
Confidence 34445566677776766666666677777754444444444444444555555666777788888874321110 1111
Q ss_pred HHHHHHHHHHHHHhccc-----hhHHHHHHHHHHHHHHhhhhhhhHH----HHHh--------hhccchhhHHhHHHHHH
Q 009978 404 IGFIAPGIALIGLTAAK-----SPVMASAWLTLAIGMKSFSHSGFLV----NLQE--------IAPQYSGVLHGISNTAG 466 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------~~~~~~g~~~g~~~~~~ 466 (521)
.+.+.++..+..+...+ +..++..++++....+........+ ...+ -.|.......+.....-
T Consensus 105 lSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iD 184 (503)
T KOG2601|consen 105 LSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGID 184 (503)
T ss_pred HHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhh
Confidence 22333333222222222 2223333333333222222111110 0011 11122233335555566
Q ss_pred HHHHHHHHHHHHHHhhcccchHHHHHHHHH
Q 009978 467 TFAAILGTVGAGFFVELVGSFQGFLLLTSL 496 (521)
Q Consensus 467 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 496 (521)
.....+.|.+.|.+....+ ....-.++++
T Consensus 185 q~tn~Lapv~tg~Iitfvs-l~~~~g~f~~ 213 (503)
T KOG2601|consen 185 QSTNLLAPVITGLIITFVS-LRASAGTFAA 213 (503)
T ss_pred hhhhchhhhhhcccceeec-hhhhhhhhHH
Confidence 6788899999999988765 4443333333
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.28 E-value=6.7 Score=29.54 Aligned_cols=33 Identities=21% Similarity=0.055 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhhhhHHHHhHh-cchHHHHHHHHH
Q 009978 141 SSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVAL 173 (521)
Q Consensus 141 s~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~~~~ 173 (521)
+.-+++..+.....||+.||| |.++..++..++
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 334455555566679999997 556555444433
No 304
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=79.68 E-value=42 Score=29.46 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=19.9
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHH
Q 009978 228 AIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (521)
Q Consensus 228 ~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~ 263 (521)
.......-++..+|..+++.+.+..+.. ..++.++
T Consensus 165 ~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~ 199 (209)
T PF06912_consen 165 ALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPAL 199 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHH
Confidence 3444445556666777777777766743 3333333
No 305
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=76.19 E-value=52 Score=31.38 Aligned_cols=31 Identities=16% Similarity=-0.027 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHH
Q 009978 138 IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (521)
Q Consensus 138 ~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~ 170 (521)
++.+...+.....+.+.+ .||+.-.|++...
T Consensus 190 ilSStSs~FtL~la~if~--~e~ft~sKllav~ 220 (416)
T KOG2765|consen 190 ILSSTSSFFTLFLAAIFP--VERFTLSKLLAVF 220 (416)
T ss_pred hhhhcchHHHHHHHHHcC--cchhhHHHHHHHH
Confidence 344443443344444444 8999999876543
No 306
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=76.12 E-value=74 Score=30.36 Aligned_cols=44 Identities=16% Similarity=0.071 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHH
Q 009978 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (521)
Q Consensus 342 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (521)
.....+........|-+..+.+.+.+.+...+.+|+.+.-++.|
T Consensus 25 vyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~d 68 (508)
T COG4262 25 VYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLD 68 (508)
T ss_pred HHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccC
Confidence 33333444444445666777777777777777777766665554
No 307
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=75.93 E-value=1e+02 Score=32.00 Aligned_cols=33 Identities=15% Similarity=0.008 Sum_probs=19.2
Q ss_pred CcccchhHhHHHHHHHHHHHHHHHHHHHHHHhc
Q 009978 358 DLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 358 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (521)
++...+..+..++++..+--++.+....|+.+|
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~lpk 355 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLLPK 355 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 444455666677777766555566555554333
No 308
>PRK10263 DNA translocase FtsK; Provisional
Probab=75.50 E-value=55 Score=37.07 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 009978 468 FAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA 502 (521)
Q Consensus 468 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (521)
.|+++|..+...+...+| ..+..++..++.++++
T Consensus 142 gGGIIG~lLs~lL~~LfG-~vGa~LILLlllLIGL 175 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLH-SSGGTIALLCVWAAGL 175 (1355)
T ss_pred ccchHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHH
Confidence 467777777776666665 3333333333333333
No 309
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=75.28 E-value=29 Score=31.46 Aligned_cols=66 Identities=18% Similarity=0.339 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhH-hcchHHHH----HHHHHHHHHHhhhhhc-ccc--chHHHHHHHHHHhhhh
Q 009978 138 IVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMA----WGVALWSLATFLTPWA-ADT--SLLALLAMRAVVGLAE 203 (521)
Q Consensus 138 ~~~s~~~~~~~i~~~~~G~l~dr-~Grr~~~~----~~~~~~~~~~~l~~~~-~~~--~~~~l~~~r~l~G~g~ 203 (521)
...-++..|..+|....|.+... +.||+.+. .+.++..++.++.+.. ..+ ++..+++.-++.|+..
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 34445666777777888887765 45555433 3344444444442121 111 3566777788888764
No 310
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=73.18 E-value=1.2e+02 Score=31.26 Aligned_cols=68 Identities=9% Similarity=0.183 Sum_probs=27.7
Q ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccchhHhHHHHHHHHHHHHHHHHHHHHH
Q 009978 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYH-IDLRQASWFSAVPWSVMAFTGYLGGLLSDML 387 (521)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 387 (521)
.++||.|.-. ..+..++..+....+.......+.- .| .++..-|.+.....+..++++.++|+.+.|+
T Consensus 252 gDVFR~P~~~-~lls~lvG~G~Qll~~~~~~~~~a~-~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 252 GDVFRPPKHP-MLLSALVGTGIQLLFMALVTLFFAA-LGFLSPNNRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred HHHhcCcCCc-hHHHhHhcchhhhhHHHHHHHHHHH-hhhccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4677776522 2222222222222222322333322 23 3444444444444444444445555544444
No 311
>PRK10263 DNA translocase FtsK; Provisional
Probab=72.85 E-value=52 Score=37.20 Aligned_cols=26 Identities=31% Similarity=0.347 Sum_probs=14.1
Q ss_pred hhhHHHHHHHHHhhhccCchhHHHHH
Q 009978 236 SGNAIGLVLSPILMSQAGIFGPFVIF 261 (521)
Q Consensus 236 ~g~~~g~~l~~~l~~~~gw~~~f~~~ 261 (521)
.|+++|..++.++...+|.-...++.
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LIL 167 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIAL 167 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHH
Confidence 45666666666665555544444333
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.71 E-value=21 Score=27.05 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=27.6
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHHHhhccc
Q 009978 453 QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (521)
Q Consensus 453 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 485 (521)
+.++.+.++-...-.+++++.....||+.|++-
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467788888888888999999999999999753
No 313
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=68.34 E-value=1.8e+02 Score=31.43 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=20.7
Q ss_pred HHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHH
Q 009978 230 AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSG 265 (521)
Q Consensus 230 ~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~ 265 (521)
...+..++.++..+++.++...++|..++++.++++
T Consensus 106 l~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 106 LVPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 333344555555555555545567877777776654
No 314
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=61.04 E-value=18 Score=27.38 Aligned_cols=52 Identities=19% Similarity=0.112 Sum_probs=43.9
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhc
Q 009978 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (521)
Q Consensus 133 ~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~ 184 (521)
+...|-+.++|.-.+.+.++++++..|+.-+-+.=.++..++.++..+..+.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3567889999999999999999999999998888888888888877766554
No 315
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=59.29 E-value=1.5e+02 Score=28.28 Aligned_cols=13 Identities=8% Similarity=0.069 Sum_probs=10.8
Q ss_pred cchHHHHHHHHHH
Q 009978 187 TSLLALLAMRAVV 199 (521)
Q Consensus 187 ~~~~~l~~~r~l~ 199 (521)
-.||.+++.|++.
T Consensus 203 fayWLFYiVri~~ 215 (531)
T KOG3814|consen 203 FAYWLFYIVRILD 215 (531)
T ss_pred HHHHHHHhhhhhc
Confidence 4689999999876
No 316
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=58.97 E-value=84 Score=26.41 Aligned_cols=58 Identities=17% Similarity=0.141 Sum_probs=32.5
Q ss_pred cCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc------CchhHHHHHHHHHHHHHHHHHH
Q 009978 217 WFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------GIFGPFVIFGLSGFLWVLVWLS 274 (521)
Q Consensus 217 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------gw~~~f~~~~~~~~i~~i~~~~ 274 (521)
.+|.+++.+..+.+.++.-.+...--.+=+.+.... .+...+++.++++.+..++.-.
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~ 77 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNS 77 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcc
Confidence 345555556666555554444333333334343322 4777888888888776655433
No 317
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=58.54 E-value=1.8e+02 Score=28.26 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=11.0
Q ss_pred HHHHhcchHHHHHHHHHHH
Q 009978 318 RRLLSKMPTWSIIVANAMH 336 (521)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~ 336 (521)
++.+++|.++..+++..+.
T Consensus 239 ~~~~~nP~~~a~~lgli~~ 257 (385)
T PF03547_consen 239 LKLFKNPPLIAIILGLIIG 257 (385)
T ss_pred HHHHhCcHHHHHHHHHHHH
Confidence 4556677766655554443
No 318
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=58.53 E-value=1.5e+02 Score=27.31 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=46.8
Q ss_pred hHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHH-HHHHHHHHHHHHHhcCCCc
Q 009978 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAF-TGYLGGLLSDMLIQRGTSV 394 (521)
Q Consensus 316 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i-~~~~~g~l~dr~~~~~~~~ 394 (521)
.++++.|+|+.+..................|.+.. | ..-++++-.-+..+.+++ |.+ ++-||+.+-
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~-----g-~~leaSLGY~InPL~~VllG~l---flkErls~~---- 127 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNN-----G-HVLEASLGYFINPLVNVLLGRL---FLKERLSRL---- 127 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCC-----C-chhHHHhHHHHHHHHHHHHHHH---HHHhhccHH----
Confidence 45578888887777666666555555555555421 1 122333333333333332 222 245666554
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccchhHHHH
Q 009978 395 TLTRKILQSIGFIAPGIALIGLTAAKSPVMAS 426 (521)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (521)
-...+++..+++....+...+-+|..+
T Consensus 128 -----Q~iAV~lA~~GV~~~~~~~g~lpwval 154 (293)
T COG2962 128 -----QWIAVGLAAAGVLIQTWLLGSLPWVAL 154 (293)
T ss_pred -----HHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 233444555555555555555555443
No 319
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=58.53 E-value=2.2e+02 Score=29.03 Aligned_cols=55 Identities=13% Similarity=0.240 Sum_probs=35.4
Q ss_pred HHhhhc--cchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Q 009978 447 LQEIAP--QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA 502 (521)
Q Consensus 447 ~~~~~~--~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (521)
..+..| ++....+|-.+...++...+...+.+.+.+..| |.....+.-++.+++.
T Consensus 307 lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G-W~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 307 LKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG-WRTAALITPIVILITG 363 (491)
T ss_pred HHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHhHHHHHHHH
Confidence 444554 356666777777666666666688888999888 7666555544444433
No 320
>PTZ00370 STEVOR; Provisional
Probab=58.09 E-value=12 Score=33.99 Aligned_cols=40 Identities=10% Similarity=0.102 Sum_probs=23.9
Q ss_pred HHhhcccchHHHHHHHHHHHHHHHHHHHHhccCccccccc
Q 009978 479 FFVELVGSFQGFLLLTSLLYFLSALFYIIFSTGERVNFDE 518 (521)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (521)
.....+..|..+-++..++.++.++++.++.|+++..|+.
T Consensus 249 aAsaaF~Pygiaalvllil~vvliilYiwlyrrRK~swkh 288 (296)
T PTZ00370 249 AASSAFYPYGIAALVLLILAVVLIILYIWLYRRRKNSWKH 288 (296)
T ss_pred HHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 3333444566666666666666666666666666666643
No 321
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=55.91 E-value=1.3e+02 Score=27.42 Aligned_cols=25 Identities=12% Similarity=-0.145 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 009978 330 IVANAMHSWGFFVILSWMPIYFNFV 354 (521)
Q Consensus 330 ~l~~~~~~~~~~~~~~~~~~~~~~~ 354 (521)
.+...+.....++....=..|.++.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3333444455555555445566664
No 322
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=55.70 E-value=2.2e+02 Score=28.35 Aligned_cols=41 Identities=5% Similarity=0.020 Sum_probs=27.6
Q ss_pred chhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccCchhHHHHHHHHH
Q 009978 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSG 265 (521)
Q Consensus 220 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~ 265 (521)
+++.+...++.+++.+.|.+.-|+..+.. |-++..+..+++
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~~-----Gf~p~lillll~ 59 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGFG-----GLIPILLMLVLA 59 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhcc-----hHHHHHHHHHHH
Confidence 45667888888888888888888776553 444444444433
No 323
>PRK02237 hypothetical protein; Provisional
Probab=54.45 E-value=32 Score=26.17 Aligned_cols=51 Identities=16% Similarity=0.011 Sum_probs=42.6
Q ss_pred chhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhc
Q 009978 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (521)
Q Consensus 134 ~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~ 184 (521)
+..|-+.++|.-.+.+.++++++..|+.-+-+.=.+|..++.++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 447889999999999999999999999988887788888887777665444
No 324
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=53.58 E-value=2e+02 Score=27.07 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhhhhcch-hhHHHHHHHhcCCch
Q 009978 190 LALLAMRAVVGLAEGVA-LPAMNNMVARWFPQT 221 (521)
Q Consensus 190 ~~l~~~r~l~G~g~~~~-~~~~~~~i~~~~~~~ 221 (521)
..-.+.-.+.+++.|.. +.+..-++.|....+
T Consensus 261 ~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 261 SSDIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444556677776643 344444555555433
No 325
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=52.65 E-value=1.8e+02 Score=26.35 Aligned_cols=21 Identities=14% Similarity=0.078 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q 009978 371 SVMAFTGYLGGLLSDMLIQRG 391 (521)
Q Consensus 371 ~~~~i~~~~~g~l~dr~~~~~ 391 (521)
++..++-+-+-+++.|+..|.
T Consensus 251 lCT~lAVigGk~lAskIS~rt 271 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRT 271 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEE
Confidence 334444344445677887774
No 326
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=50.71 E-value=23 Score=32.08 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=22.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCcccccccc
Q 009978 484 VGSFQGFLLLTSLLYFLSALFYIIFSTGERVNFDEA 519 (521)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (521)
+..|..+-++..++.++.++++.++.|+++..|+.+
T Consensus 258 F~Pcgiaalvllil~vvliiLYiWlyrrRK~swkhe 293 (295)
T TIGR01478 258 FLPYGIAALVLIILTVVLIILYIWLYRRRKKSWKHE 293 (295)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 334666666666666666666666777777777543
No 327
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=49.96 E-value=52 Score=27.09 Aligned_cols=51 Identities=12% Similarity=0.039 Sum_probs=35.9
Q ss_pred cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHH
Q 009978 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAI 240 (521)
Q Consensus 187 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 240 (521)
+++..++....+.|+|. ....+.+++.-.++++-|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 45566666666666653 3456777777778888899999988887776543
No 328
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=47.30 E-value=2e+02 Score=26.74 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=32.6
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhcc
Q 009978 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (521)
Q Consensus 192 l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 252 (521)
.-..|.+.|+-.-. +...++++.-.||++++-...--...+.+++.++-|++|- +.+..
T Consensus 22 ~~~lr~~~g~~~vl-f~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~-~l~~~ 80 (287)
T PF07760_consen 22 IPPLRVILGFPFVL-FLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGL-LLNYT 80 (287)
T ss_pred hhHHHHHHHHHHHH-HhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence 45667777776533 4667888999998654332222233333444444555444 44433
No 329
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=45.26 E-value=2.6e+02 Score=26.10 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhH---hcchHHHHHHHHH
Q 009978 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY---YGGKIIMAWGVAL 173 (521)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr---~Grr~~~~~~~~~ 173 (521)
+....+.+...+++.-+..+..+-.+..+.+..+......++..+...... +.+-.++ ||.||.=+++.++
T Consensus 23 ~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa~~ 96 (296)
T COG1230 23 RLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAAFL 96 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHHHH
Confidence 334444444444444444445555566666767665555555544433322 2222222 6888876666665
Q ss_pred HHHHHhh
Q 009978 174 WSLATFL 180 (521)
Q Consensus 174 ~~~~~~l 180 (521)
.++..+.
T Consensus 97 nav~Li~ 103 (296)
T COG1230 97 NALLLIV 103 (296)
T ss_pred HHHHHHH
Confidence 5554443
No 330
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=41.77 E-value=1.6e+02 Score=24.32 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=23.9
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHhHhcch
Q 009978 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK 164 (521)
Q Consensus 133 ~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr 164 (521)
+..+.++.+...++..+.++-.|.|+-.+...
T Consensus 95 P~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 44566777777888888888888888877654
No 331
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=39.45 E-value=97 Score=26.53 Aligned_cols=23 Identities=17% Similarity=0.430 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhhhhHHHHhHhcc
Q 009978 141 SSFLWGYLVSPIAGGTLVDYYGG 163 (521)
Q Consensus 141 s~~~~~~~i~~~~~G~l~dr~Gr 163 (521)
.-|.+++.+.+.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 35778888999999999999885
No 332
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=39.13 E-value=3.9e+02 Score=26.33 Aligned_cols=29 Identities=24% Similarity=0.212 Sum_probs=18.2
Q ss_pred hhHHHHHHHHhhhhhhhHHHHHHHHHhhh
Q 009978 222 ERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (521)
Q Consensus 222 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 250 (521)
+|.+...+.....-++.++-|+++-+.-.
T Consensus 108 eR~~~~~~ii~~~l~~~~vy~~~~~w~w~ 136 (399)
T PF00909_consen 108 ERIKFSAYIIFGFLWGGLVYPPLAHWVWG 136 (399)
T ss_dssp CCCHHHHHHHHHHHCCCCTHHHHHHHHHC
T ss_pred ceeeehHHHHHHHHHhhhhccccceEEEe
Confidence 45566666666666677777776655543
No 333
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=37.57 E-value=1.8e+02 Score=26.94 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=15.1
Q ss_pred HHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhc
Q 009978 169 WGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (521)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~ 204 (521)
.+.++++++.++..+.. ++.|.+.+.-++.+++.+
T Consensus 4 ~~~~~~~~~s~~~~l~~-~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLF-PYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHH
Confidence 34444434444433331 344445544445444433
No 334
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=36.37 E-value=1.4e+02 Score=24.48 Aligned_cols=24 Identities=17% Similarity=0.346 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhhhHHHHhHhcchH
Q 009978 142 SFLWGYLVSPIAGGTLVDYYGGKI 165 (521)
Q Consensus 142 ~~~~~~~i~~~~~G~l~dr~Grr~ 165 (521)
-|.++..+...+.|++.+|..+++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhccccc
Confidence 577888899999999999988764
No 335
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=35.15 E-value=1.7e+02 Score=29.30 Aligned_cols=12 Identities=17% Similarity=0.221 Sum_probs=9.8
Q ss_pred cchHHHHHHHHH
Q 009978 187 TSLLALLAMRAV 198 (521)
Q Consensus 187 ~~~~~l~~~r~l 198 (521)
-+||.+++.|++
T Consensus 179 ~syWLFY~vrIl 190 (505)
T PF06638_consen 179 FSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHhhheee
Confidence 568999988877
No 336
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=34.37 E-value=2.5e+02 Score=24.33 Aligned_cols=29 Identities=10% Similarity=-0.065 Sum_probs=12.3
Q ss_pred HHHHHHhhhccCchhHHHHHHHHHHHHHH
Q 009978 242 LVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (521)
Q Consensus 242 ~~l~~~l~~~~gw~~~f~~~~~~~~i~~i 270 (521)
+++++.......-.|..-..|.+-+...+
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi 71 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGI 71 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 34444444444444443444444444333
No 337
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=33.67 E-value=2.9e+02 Score=29.70 Aligned_cols=49 Identities=16% Similarity=0.080 Sum_probs=29.4
Q ss_pred HHHHhH----hcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhc
Q 009978 155 GTLVDY----YGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (521)
Q Consensus 155 G~l~dr----~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~ 204 (521)
+-++|. -||.+-++++.++++++.+...+.. +..|.+..+-++.+++.+
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~-~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF-GKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHH
Confidence 445554 2566667777888777776655541 455555555555555543
No 338
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=33.55 E-value=1e+02 Score=27.30 Aligned_cols=54 Identities=20% Similarity=0.305 Sum_probs=36.8
Q ss_pred HHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 194 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
....-.|+|.|..+.++..-+.+.+| +......++-....-+..+.|-.+.-++
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455789999888888888888886 5556666666666655555555544433
No 339
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=32.11 E-value=1.5e+02 Score=19.34 Aligned_cols=34 Identities=12% Similarity=-0.019 Sum_probs=20.1
Q ss_pred HHHHHHHHhhhhhHHHHhHh-cchHHHHHHHHHHH
Q 009978 142 SFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWS 175 (521)
Q Consensus 142 ~~~~~~~i~~~~~G~l~dr~-Grr~~~~~~~~~~~ 175 (521)
...+...+.....|+..|+. +.++...+..++.+
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 34455556666778888875 66565554444433
No 340
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=31.94 E-value=5.3e+02 Score=25.78 Aligned_cols=147 Identities=10% Similarity=-0.081 Sum_probs=71.9
Q ss_pred HhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhc-cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHH
Q 009978 215 ARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEY 293 (521)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gw~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 293 (521)
.|..|+++|...........+.-..++....|.+... .+++...+...+-.++..+...+.--.-++..-
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Gl--------- 81 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGL--------- 81 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCC---------
Confidence 4566777775444555555555555555555554433 566665555444444433333322111111100
Q ss_pred HHHhhccccccCCCCCCCCCCchHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHH
Q 009978 294 ILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (521)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 373 (521)
+....-|..+-.+.-+...+...+...+.++++.++.-.... ..+.....+...+.++..
T Consensus 82 ------------------pqmi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~--~~~~~~~~~~ili~g~l~ 141 (442)
T COG1457 82 ------------------PQMILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG--SGTGLPVWAGILIIGVLM 141 (442)
T ss_pred ------------------ChheeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc--cCCCCcHHHHHHHHHHHH
Confidence 000011122333334455555555556666666555443311 113333444555566667
Q ss_pred HHHHHHHHHHHHHHHhc
Q 009978 374 AFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 374 ~i~~~~~g~l~dr~~~~ 390 (521)
.+..+++-+...++.|.
T Consensus 142 ~l~~ifG~r~l~~l~~~ 158 (442)
T COG1457 142 TLVTIFGYRALHKLERI 158 (442)
T ss_pred HHHHHHhHHHHHHHHHH
Confidence 77777777888777766
No 341
>COG3619 Predicted membrane protein [Function unknown]
Probab=31.24 E-value=3.8e+02 Score=23.90 Aligned_cols=26 Identities=12% Similarity=0.087 Sum_probs=15.0
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 228 AIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 228 ~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
.......-++.++|...++++...+|
T Consensus 171 ~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 171 WLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444455566666666666655555
No 342
>PTZ00370 STEVOR; Provisional
Probab=31.23 E-value=2.2e+02 Score=26.27 Aligned_cols=39 Identities=5% Similarity=-0.027 Sum_probs=21.3
Q ss_pred HHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcCC
Q 009978 240 IGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSS 278 (521)
Q Consensus 240 ~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~~~~~~ 278 (521)
.|+..+.......+|-.+-++..+++++++++..++.++
T Consensus 243 agtAAtaAsaaF~Pygiaalvllil~vvliilYiwlyrr 281 (296)
T PTZ00370 243 AGTAASAASSAFYPYGIAALVLLILAVVLIILYIWLYRR 281 (296)
T ss_pred cchHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444444444556666666666666666665555433
No 343
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=29.99 E-value=4.2e+02 Score=23.98 Aligned_cols=25 Identities=24% Similarity=0.266 Sum_probs=12.8
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHh
Q 009978 224 ARAVAIAMGGFTSGNAIGLVLSPIL 248 (521)
Q Consensus 224 ~~~~~~~~~~~~~g~~~g~~l~~~l 248 (521)
.+.....-.+.-+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555655555444333
No 344
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=29.38 E-value=18 Score=32.62 Aligned_cols=33 Identities=6% Similarity=0.021 Sum_probs=0.0
Q ss_pred hhccchhhHHhHHHHHHHHHHHHHHHHHHHHhh
Q 009978 450 IAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (521)
Q Consensus 450 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 482 (521)
+..+.-++...+..++-.+.-.+.-++...+..
T Consensus 128 lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L~ 160 (381)
T PF05297_consen 128 LLRELGASFWTILAFCLAFLLAIVLLIIAVLLH 160 (381)
T ss_dssp ---------------------------------
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444333333344444443
No 345
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=28.25 E-value=78 Score=20.11 Aligned_cols=15 Identities=7% Similarity=0.346 Sum_probs=6.6
Q ss_pred HHHHHhccCcccccc
Q 009978 503 LFYIIFSTGERVNFD 517 (521)
Q Consensus 503 ~~~~~~~~~~~~~~~ 517 (521)
++++.++++++++.+
T Consensus 25 i~~w~~~~~~k~~~e 39 (49)
T PF05545_consen 25 IVIWAYRPRNKKRFE 39 (49)
T ss_pred HHHHHHcccchhhHH
Confidence 344444544444433
No 346
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=27.61 E-value=5.8e+02 Score=24.80 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=21.1
Q ss_pred hhhhhhhhhhhhhhhcCCcchhhHHH
Q 009978 115 RVVMSVAIVPLSLAHGWSRSFSGIVQ 140 (521)
Q Consensus 115 ~~~~~~~~~~~~~~~~~s~~~~g~~~ 140 (521)
.-.....+....+++|+++...|.+.
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvII 263 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLV 263 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHH
Confidence 44566778888899999999999876
No 347
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=27.57 E-value=1.5e+02 Score=29.41 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=20.5
Q ss_pred hhhhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcch
Q 009978 123 VPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK 164 (521)
Q Consensus 123 ~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr 164 (521)
..+-+.+|+++...|+.. ...|..+--++...+..|-|--
T Consensus 448 ~~iGeT~gIp~eIMGLTi--LAAGTSIPDlitSvIVARKGlG 487 (588)
T KOG1307|consen 448 NIIGETLGIPDEIMGLTI--LAAGTSIPDLITSVIVARKGLG 487 (588)
T ss_pred HHcccccCCCHHHhhhhh--hhcCCchHHhhHhhhhcccccc
Confidence 344556677777666533 2333344444455555555543
No 348
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=27.19 E-value=1e+02 Score=21.95 Aligned_cols=30 Identities=13% Similarity=0.146 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 009978 471 ILGTVGAGFFVELVGSFQGFLLLTSLLYFLSAL 503 (521)
Q Consensus 471 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 503 (521)
.+.+++.|++.+. +...+...++..+++++
T Consensus 21 ~iisfi~Gy~~q~---~~~~~~~~~~g~~~~~l 50 (76)
T PF06645_consen 21 AIISFIVGYITQS---FSYTFYIYGAGVVLTLL 50 (76)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHh
Confidence 4455677888775 44444444444444333
No 349
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=26.54 E-value=2e+02 Score=19.12 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=22.2
Q ss_pred hhhhHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 009978 235 TSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (521)
Q Consensus 235 ~~g~~~g~~l~~~l~~~~gw~~~f~~~~~~~~i~~i~~~ 273 (521)
-+|.++|.+.+......+++.....+..+++++..++..
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 345555555555554556666666666666655554444
No 350
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=25.82 E-value=3.5e+02 Score=22.87 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=18.4
Q ss_pred hhhhhcCCcchhh--HHHHHHHHHHHHhhhhhHHHHh
Q 009978 125 LSLAHGWSRSFSG--IVQSSFLWGYLVSPIAGGTLVD 159 (521)
Q Consensus 125 ~~~~~~~s~~~~g--~~~s~~~~~~~i~~~~~G~l~d 159 (521)
...-+|+++..+- ...++..+|+++|+.++..+-.
T Consensus 68 ~~~I~GlDP~~~~g~~t~a~g~lG~L~GP~~G~~vf~ 104 (173)
T PF08566_consen 68 TQQIMGLDPFMVYGLATLACGALGWLVGPSLGNQVFR 104 (173)
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 3344577776542 2334556666666665544433
No 351
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=25.37 E-value=2.8e+02 Score=21.06 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=14.3
Q ss_pred HHhhhhhHHHHhH-hcchHHHHHHHHHH
Q 009978 148 LVSPIAGGTLVDY-YGGKIIMAWGVALW 174 (521)
Q Consensus 148 ~i~~~~~G~l~dr-~Grr~~~~~~~~~~ 174 (521)
.+.+.+.|...|+ ++-++.+.+.+++.
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 3445556777776 45555444443333
No 352
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=25.17 E-value=72 Score=24.07 Aligned_cols=53 Identities=15% Similarity=0.020 Sum_probs=41.4
Q ss_pred CcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhc
Q 009978 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (521)
Q Consensus 132 s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~ 184 (521)
++...|-..++|.-.+.+.++.+++..|+.-+-+.=.+|..++.++..+..+.
T Consensus 53 ~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 53 PAAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred CchhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 34456788888989999999999999999888777777777777775554443
No 353
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=25.14 E-value=1.8e+02 Score=25.14 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=26.0
Q ss_pred hhhhhhhhhhhhhcCCcchhhHHHHHHHHHHHHhhh---------hhHHHHhHhcchH
Q 009978 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPI---------AGGTLVDYYGGKI 165 (521)
Q Consensus 117 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~---------~~G~l~dr~Grr~ 165 (521)
..+...|.+.. .+..+.......+.+...+... ..+...||||+.-
T Consensus 112 NigIYiP~Fa~---~s~~~l~v~l~vF~ilv~v~c~la~~l~~~p~i~~~leryg~~l 166 (191)
T PF03596_consen 112 NIGIYIPLFAS---LSLAELIVILIVFLILVGVWCFLAYKLARIPIIAEFLERYGRWL 166 (191)
T ss_pred eEEEeehhhhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHhcccH
Confidence 55666776653 4555555555555554444333 3366677777763
No 354
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=25.06 E-value=4.6e+02 Score=22.77 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=24.3
Q ss_pred chhhHHHHHHHHhhhhhhhHHHHHHHHHhhh
Q 009978 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (521)
Q Consensus 220 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 250 (521)
.++.+++.++.-.+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888888888888888888888877754
No 355
>PRK10995 inner membrane protein; Provisional
Probab=24.99 E-value=4.9e+02 Score=23.09 Aligned_cols=66 Identities=12% Similarity=0.038 Sum_probs=34.5
Q ss_pred hHHHHHhhhccchhhHHhHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 009978 443 FLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (521)
Q Consensus 443 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
......+..+++|-+..--.......-..+....+..+.+.+|-....+-+.+.+.+....+-.+.
T Consensus 28 f~~lt~~~~~~~r~~ia~~~~~~a~~ill~f~~~G~~il~~fgIs~~a~rIaGGilL~~igi~ml~ 93 (221)
T PRK10995 28 FLGLSGNMTPEERNRQALMASVYVFAIMMVAFYAGQLVMSTFGISIPGLRIAGGLIVAFIGFRMLF 93 (221)
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 334444555543333222222233333345555566677777766677777777666555544443
No 356
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.87 E-value=5e+02 Score=27.94 Aligned_cols=50 Identities=14% Similarity=0.084 Sum_probs=30.2
Q ss_pred hHHHHhHh----cchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhc
Q 009978 154 GGTLVDYY----GGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (521)
Q Consensus 154 ~G~l~dr~----Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~ 204 (521)
++-+.|.= ||.+-++++.++++++.+...+.. +..|.+...-++.+++.+
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~-~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF-PKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHH
Confidence 34455543 556778888888888877766552 444555555555555543
No 357
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=24.74 E-value=2.2e+02 Score=25.33 Aligned_cols=34 Identities=18% Similarity=0.066 Sum_probs=21.9
Q ss_pred HHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHH
Q 009978 352 NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (521)
Q Consensus 352 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (521)
.|++|.+..+.--+++.+.++.++|.++.+.+..
T Consensus 131 ~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas 164 (241)
T PF11299_consen 131 SEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLAS 164 (241)
T ss_pred ehhcCCCCccccceEEEeeehhhHHHHHHHHHHH
Confidence 4557877666555566666667777766665554
No 358
>PRK10692 hypothetical protein; Provisional
Probab=24.71 E-value=1.6e+02 Score=21.37 Aligned_cols=17 Identities=24% Similarity=0.130 Sum_probs=8.2
Q ss_pred chHHHHHHHHHHHHHHh
Q 009978 163 GKIIMAWGVALWSLATF 179 (521)
Q Consensus 163 rr~~~~~~~~~~~~~~~ 179 (521)
||...+++.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 44445555555544443
No 359
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=24.70 E-value=6.8e+02 Score=24.65 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=24.9
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHH
Q 009978 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL 244 (521)
Q Consensus 197 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 244 (521)
++.|+..|.........+.+..+-++---+.++.....-.|.+..++.
T Consensus 278 ~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 325 (399)
T PF00909_consen 278 LLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLF 325 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHH
T ss_pred HHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHH
Confidence 344554444444444445555555555567777666655555554443
No 360
>PRK00187 multidrug efflux protein NorA; Provisional
Probab=24.25 E-value=7.4e+02 Score=24.90 Aligned_cols=11 Identities=18% Similarity=0.132 Sum_probs=6.4
Q ss_pred hHHHHhHhcch
Q 009978 154 GGTLVDYYGGK 164 (521)
Q Consensus 154 ~G~l~dr~Grr 164 (521)
....+.++|.|
T Consensus 70 ~~i~aq~~Ga~ 80 (464)
T PRK00187 70 GTLVAIRHGAG 80 (464)
T ss_pred HHHHHHHhcCC
Confidence 34456677754
No 361
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=23.80 E-value=5.1e+02 Score=25.29 Aligned_cols=107 Identities=9% Similarity=0.044 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHH-HHHHHHHHhhhhh-ccccchHHHHHHHHHHhhhhcchhhHHHHH
Q 009978 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG-VALWSLATFLTPW-AADTSLLALLAMRAVVGLAEGVALPAMNNM 213 (521)
Q Consensus 136 ~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~-~~~~~~~~~l~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~ 213 (521)
+|-+..-..+.+++.++=.=-+.|--.+--+++.. .+.+.+......+ ....||..-..+---+|+|.|. .|...+-
T Consensus 281 ig~vsL~lflamALmSlkLweL~~l~lpl~viL~vQ~i~m~lfa~fvtfr~mG~~YdAaV~~~G~~G~gLGA-TPtAian 359 (404)
T COG0786 281 IGNVSLSLFLAMALMSLKLWELADLALPLLVILAVQTIVMALFAIFVTFRLMGKNYDAAVLAAGHCGFGLGA-TPTAIAN 359 (404)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhCcchhHHHHhcccccCccCC-cHHHHHh
Confidence 34444445566666665544555555544333222 2222221111111 0125666655555556666554 4444444
Q ss_pred HHhcCCchhhHHHHHHHHhhhhhhhHHHHHHHHHhhhccC
Q 009978 214 VARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (521)
Q Consensus 214 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 253 (521)
+.... +|.|. ..-..++-|++++++.+..+
T Consensus 360 M~av~-~k~g~---------S~kAf~ivPiVGAffid~in 389 (404)
T COG0786 360 MQAVT-EKFGP---------SHKAFIVVPIVGAFFIDIIN 389 (404)
T ss_pred hhcch-hhcCC---------CceeeEEeehHHHHHHHHHH
Confidence 44443 23332 23345667777777766443
No 362
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=23.70 E-value=3.5e+02 Score=23.78 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 009978 372 VMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMK 436 (521)
Q Consensus 372 ~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (521)
++.+|..+..++.+|+..- .....++....+..-......+....+...+++...+
T Consensus 15 G~iiG~l~~~klper~k~~---------l~~~~Gl~~l~iGI~m~~~~~n~~~~ilslv~G~vIG 70 (228)
T COG1811 15 GGIIGLLIGKKLPERIKDI---------LMQCLGLAILGIGIKMALQAKNDIMILLALVIGAVIG 70 (228)
T ss_pred HHHHHHHHcccCcHHHHHH---------HHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 3344444444455555443 4555666666666555555666665555555544433
No 363
>PRK11715 inner membrane protein; Provisional
Probab=23.55 E-value=7.5e+02 Score=24.73 Aligned_cols=15 Identities=7% Similarity=0.011 Sum_probs=6.1
Q ss_pred HHHhcCCchhhHHHH
Q 009978 213 MVARWFPQTERARAV 227 (521)
Q Consensus 213 ~i~~~~~~~~r~~~~ 227 (521)
|+.......+|+..+
T Consensus 375 Y~~~vl~~~k~g~~~ 389 (436)
T PRK11715 375 YLSAVLRSWKRGLLF 389 (436)
T ss_pred HHHHHHhcchHHHHH
Confidence 334444334444433
No 364
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=23.01 E-value=2.1e+02 Score=18.16 Aligned_cols=31 Identities=23% Similarity=0.198 Sum_probs=13.6
Q ss_pred HHHHHHHHhhhccC----chhHHHHHHHHHHHHHH
Q 009978 240 IGLVLSPILMSQAG----IFGPFVIFGLSGFLWVL 270 (521)
Q Consensus 240 ~g~~l~~~l~~~~g----w~~~f~~~~~~~~i~~i 270 (521)
+|..+++++...++ +.+.-++.+++..+.++
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill 40 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILL 40 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHH
Confidence 44444444444333 34444455554444333
No 365
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=22.52 E-value=3.8e+02 Score=23.94 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 009978 371 SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMK 436 (521)
Q Consensus 371 ~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (521)
+++.+|..+..++.||+.+. .....++....+..-.....++....+..+.++...+
T Consensus 13 ~G~~iG~~~~~~i~~~~~~~---------l~~~~Gl~~l~iGi~~~~~~~~~~~vi~slvlG~iiG 69 (226)
T PF04474_consen 13 LGGLIGLLLGRRIPERIKDT---------LMQALGLCVLAIGISMALKGQNPLLVILSLVLGTIIG 69 (226)
T ss_pred HHHHHHHHHcCCCCHHHHHH---------HHHHhhHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 34455555555566666554 4555555555555555555555555555555555444
No 366
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms]
Probab=22.34 E-value=3.7e+02 Score=28.25 Aligned_cols=12 Identities=17% Similarity=0.263 Sum_probs=6.2
Q ss_pred HhhhhhHHHHhH
Q 009978 149 VSPIAGGTLVDY 160 (521)
Q Consensus 149 i~~~~~G~l~dr 160 (521)
+...+.|.+.+|
T Consensus 109 i~~~PlGklma~ 120 (761)
T KOG2262|consen 109 IATYPLGKLMAK 120 (761)
T ss_pred HHHHhHHHHHHH
Confidence 344455666553
No 367
>COG4769 Predicted membrane protein [Function unknown]
Probab=22.04 E-value=1.7e+02 Score=24.37 Aligned_cols=51 Identities=12% Similarity=0.131 Sum_probs=31.8
Q ss_pred HHHHHHHhhhhhHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhh
Q 009978 143 FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGL 201 (521)
Q Consensus 143 ~~~~~~i~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~ 201 (521)
+.....+.+.+.-++..++|+|.+-.+|.-++ -++. +|+.++.+.+++.+-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~--hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFT--HNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHH--HhHHHHHHHHHHHhc
Confidence 34444555666677888888887655444332 2344 777777777777653
No 368
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.01 E-value=4.9e+02 Score=22.00 Aligned_cols=63 Identities=11% Similarity=-0.022 Sum_probs=33.8
Q ss_pred HHHHhHhcchH-HHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHH
Q 009978 155 GTLVDYYGGKI-IMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERAR 225 (521)
Q Consensus 155 G~l~dr~Grr~-~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~ 225 (521)
.++..-+.++| ...+..+...+.++..++.. +|...=++..+++.++. .-|.-.++|-.++|.
T Consensus 100 ~ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~~-ks~iLtllf~ilq~lal-------iwYslSyiP~g~~gv 163 (175)
T KOG2887|consen 100 SQLKHMFSPERLPATLSYLATMVLTLYVALWL-KSKILTLLFCILQVLAL-------IWYSLSYIPFGRSGV 163 (175)
T ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-------HHHHHHhCcchhhHH
Confidence 34444455544 44455555555555555432 55555566667776653 224445667666554
No 369
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=21.97 E-value=5.1e+02 Score=23.54 Aligned_cols=51 Identities=16% Similarity=0.246 Sum_probs=28.8
Q ss_pred cchHHHHHHHHHHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHH
Q 009978 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (521)
Q Consensus 187 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 241 (521)
.|...++.+....|+-... ....-...+..| +|.....+...++++|..+-
T Consensus 32 ~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l 82 (249)
T PF10225_consen 32 RSVLFYYSSGISLGVLASL--LILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFL 82 (249)
T ss_pred cChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc--CcchhHHHHhhhhHHHHHHH
Confidence 6777777777777765332 334445778888 44444444444445544333
No 370
>PF13440 Polysacc_synt_3: Polysaccharide biosynthesis protein
Probab=21.95 E-value=5.5e+02 Score=22.60 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHH
Q 009978 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFT 376 (521)
Q Consensus 343 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~ 376 (521)
.....+.++...+ +++++.|.+.....+...+.
T Consensus 201 ~~~~~~~~li~~~-l~~~~~g~y~~a~~l~~~~~ 233 (251)
T PF13440_consen 201 LLSQIDRLLIGYF-LGPEAVGIYSVAQRLASLPA 233 (251)
T ss_pred HHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHH
Confidence 3455666666642 37778887766655555443
No 371
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=21.62 E-value=7.3e+02 Score=23.88 Aligned_cols=60 Identities=12% Similarity=0.059 Sum_probs=30.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhHhHHHHHHHHHHHHHHHHHHHHHHhc
Q 009978 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (521)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (521)
|.++.+.....+.+.++.+.... .... +.+....+ .....+.-+...++.+.+++++|.|
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nl-q~~v----n~~lg~~s--l~~~y~~l~~s~m~~~~~Ir~~g~K 88 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNL-QTSV----NYDLGTVS--LGALYLSLIDSSMFMPLLIRFLGTK 88 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHH-HHHH----hcCcccch--hhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 34555555555555555544322 2211 22222222 1223444556677777899999988
No 372
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=21.53 E-value=2.6e+02 Score=20.50 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=25.8
Q ss_pred HHHHhhhhhHHHHhHhcc-------hHHHHHHHHHHHHHHhhhhhc
Q 009978 146 GYLVSPIAGGTLVDYYGG-------KIIMAWGVALWSLATFLTPWA 184 (521)
Q Consensus 146 ~~~i~~~~~G~l~dr~Gr-------r~~~~~~~~~~~~~~~l~~~~ 184 (521)
+.....+.++++.+|..+ ++.+.++.++...+.++++..
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayq 75 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQ 75 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 334455666777777654 677777777777777776664
No 373
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=21.46 E-value=8e+02 Score=24.26 Aligned_cols=48 Identities=17% Similarity=0.115 Sum_probs=26.0
Q ss_pred HHhhhhcchhhHHHHHHHhcCCchhhHHHHHHHHhhhhhhhHHHHHHH
Q 009978 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (521)
Q Consensus 198 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 245 (521)
+.|+..+........++.+..+-++---+.++.....-+|.++.++++
T Consensus 284 viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 284 IIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 344444444444444455555444444567777666666666655554
No 374
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=21.16 E-value=4e+02 Score=20.71 Aligned_cols=43 Identities=21% Similarity=0.154 Sum_probs=20.8
Q ss_pred hhhhhcCCcchhhHHHHHHHHHHHHhhhhhHHHHhHhcchHHHHHH
Q 009978 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (521)
Q Consensus 125 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~dr~Grr~~~~~~ 170 (521)
+....+.++....+.. .+...++.+++|..+-|.-++|-.+.+
T Consensus 28 ll~~~~~~e~~~~~~~---~~i~~ls~~~GG~~a~~~~~~kG~l~G 70 (116)
T PF12670_consen 28 LLYFTSLSESILPWLV---VIIYILSVFIGGFYAGRKAGSKGWLHG 70 (116)
T ss_pred HHHHcCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 3334456666555543 333444555555555555444433333
No 375
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=20.90 E-value=3.9e+02 Score=20.50 Aligned_cols=58 Identities=10% Similarity=-0.089 Sum_probs=31.7
Q ss_pred hHHHHhHhcchHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHhhhhcchhhHHHH
Q 009978 154 GGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNN 212 (521)
Q Consensus 154 ~G~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~ 212 (521)
.=..+|.+.|+...+...+.+.++..+++.+. .+.+.=.+.-.-.|+|..........
T Consensus 20 ~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~al-k~ipvgvAYAiW~GiG~v~~~l~g~~ 77 (106)
T COG2076 20 LLKYSDGFTRLWPSILTIVGYGLSFYLLSLAL-KTIPLGVAYAIWTGIGIVGTALVGVL 77 (106)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHH-hhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777777766666666666666655542 23333344444555655443333333
No 376
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=20.84 E-value=8.5e+02 Score=24.33 Aligned_cols=29 Identities=21% Similarity=0.192 Sum_probs=13.7
Q ss_pred HHHhHhcchHH-----HHHHHHHHHHHHhhhhhc
Q 009978 156 TLVDYYGGKII-----MAWGVALWSLATFLTPWA 184 (521)
Q Consensus 156 ~l~dr~Grr~~-----~~~~~~~~~~~~~l~~~~ 184 (521)
.+.+...++++ +++|+.+...-.++.+++
T Consensus 313 flfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlS 346 (430)
T PF06123_consen 313 FLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLS 346 (430)
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34454444443 444444444444555554
No 377
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=20.68 E-value=1.4e+02 Score=22.79 Aligned_cols=30 Identities=20% Similarity=0.129 Sum_probs=21.2
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 009978 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (521)
Q Consensus 250 ~~~gw~~~f~~~~~~~~i~~i~~~~~~~~~ 279 (521)
+..+|+.+|++...++++.+.+.+...|+.
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 455799999887777777666666665554
No 378
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=20.13 E-value=1.5e+02 Score=18.84 Aligned_cols=16 Identities=31% Similarity=0.586 Sum_probs=7.2
Q ss_pred HHHHHhccCccccccc
Q 009978 503 LFYIIFSTGERVNFDE 518 (521)
Q Consensus 503 ~~~~~~~~~~~~~~~~ 518 (521)
++++.++++++++.+|
T Consensus 26 iv~wa~~p~~k~~f~e 41 (48)
T cd01324 26 VVVWAFRPGRKKAFDE 41 (48)
T ss_pred HHHHHhCCCcchhHHH
Confidence 3444455444444433
No 379
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.07 E-value=53 Score=26.28 Aligned_cols=13 Identities=8% Similarity=-0.097 Sum_probs=5.7
Q ss_pred hhHHHHHHHHHHH
Q 009978 255 FGPFVIFGLSGFL 267 (521)
Q Consensus 255 ~~~f~~~~~~~~i 267 (521)
||++++..++.++
T Consensus 1 RW~l~~iii~~i~ 13 (130)
T PF12273_consen 1 RWVLFAIIIVAIL 13 (130)
T ss_pred CeeeHHHHHHHHH
Confidence 4444444444333
Done!